Satellite Remote Sensing of Chlorophyll a in Support of Nutrient Management in the Neuse and Tar-Pamlico River Estuaries

EPA Science Inventory

The North Carolina Environmental Management Commission (EMC) has adopted as a water quality standard that chlorophyll a concentration should not exceed 40 ug/L in sounds, estuaries and other slow-moving waters. Exceedances require regulators to develop a Total Maximum Daily Limit...

Satellite remote sensing of chlorophyll a in support of nutrient management in the Neuse and Tar-Pamlico River (North Carolina) estuaries

EPA Science Inventory

The North Carolina Environmental Management Commission (EMC) has adopted as a water quality standard that chlorophyll a concentration should not exceed 40 ug/L in sounds, estuaries and other slow-moving waters. Exceedances require regulators to develop a Total Maximum Daily Limit...

Deciphering the Temporal and Spatial Complexity in Submarine Canyons in Antarctica: the Role of Mixed Layer Depth in Regulating Primary Production

NASA Astrophysics Data System (ADS)

Carvalho, F.; Kohut, J. T.; Schofield, O.; Oliver, M. J.; Gorbunov, M. Y.

2016-02-01

There is a high spatial and temporal variability in the biophysical processes regulating primary productivity in submarine canyons in the West Antarctic Peninsula (WAP). WAP canyon heads are considered biological "hotspots" by providing predictable food resource and driving penguin foraging locations. Because the physiology and composition of the phytoplankton blooms and the physical mechanisms driving them aren't well understood, we aim to characterize the dynamics of the spring phytoplankton bloom at the head of a canyon in the WAP. A 6-year record of Slocum glider deployments is analyzed, corresponding to over 16,000 water column profiles. The mixed layer depth (MLD), determined by the maximum of the buoyancy frequency criteria, was found to be the MLD definition with the highest ecological relevance. The same holds true for other regions in Antarctica such as the Ross and Amundsen Seas. A FIRe sensor on a glider was used to evaluate physiological responses of phytoplankton to canyon dynamics using fluorescence kinetics. Initial results show a spatial influence, with increased photosynthetic efficiencies found at the canyon head. The strongest signal was the seasonal cycle. The shoaling of the MLD in early January results in increased chlorophyll a concentrations and as MLD deepens in mid season due to wind forcing, phytoplankton concentrations decrease, likely due to decreased light availability. A consistent secondary peak in chlorophyll matches a shoaling in MLD later in the growth season. A steady warming and increase in salinity of the MLD is seen throughout the season. Spatial differences were recorded at the head of the canyon and result from the local circulation. Shallower MLD found on the northern region are consistent with a fresher surface ocean (coastal influence) and increased chlorophyll concentrations. The southern region is thought to be more oceanic influenced as intrusions of warm deep water (mUCDW) to the upper water column were recorded regularly there.

First Autonomous Bio-Optical Profiling Float in the Gulf of Mexico Reveals Dynamic Biogeochemistry in Deep Waters

PubMed Central

Green, Rebecca E.; Bower, Amy S.; Lugo-Fernández, Alexis

2014-01-01

Profiling floats equipped with bio-optical sensors well complement ship-based and satellite ocean color measurements by providing highly-resolved time-series data on the vertical structure of biogeochemical processes in oceanic waters. This is the first study to employ an autonomous profiling (APEX) float in the Gulf of Mexico for measuring spatiotemporal variability in bio-optics and hydrography. During the 17-month deployment (July 2011 to December 2012), the float mission collected profiles of temperature, salinity, chlorophyll fluorescence, particulate backscattering (bbp), and colored dissolved organic matter (CDOM) fluorescence from the ocean surface to a depth of 1,500 m. Biogeochemical variability was characterized by distinct depth trends and local “hot spots”, including impacts from mesoscale processes associated with each of the water masses sampled, from ambient deep waters over the Florida Plain, into the Loop Current, up the Florida Canyon, and eventually into the Florida Straits. A deep chlorophyll maximum (DCM) occurred between 30 and 120 m, with the DCM depth significantly related to the unique density layer ρ = 1023.6 (R2 = 0.62). Particulate backscattering, bbp, demonstrated multiple peaks throughout the water column, including from phytoplankton, deep scattering layers, and resuspension. The bio-optical relationship developed between bbp and chlorophyll (R2 = 0.49) was compared to a global relationship and could significantly improve regional ocean-color algorithms. Photooxidation and autochthonous production contributed to CDOM distributions in the upper water column, whereas in deep water, CDOM behaved as a semi-conservative tracer of water masses, demonstrating a tight relationship with density (R2 = 0.87). In the wake of the Deepwater Horizon oil spill, this research lends support to the use of autonomous drifting profilers as a powerful tool for consideration in the design of an expanded and integrated observing network for the Gulf of Mexico. PMID:24992646

Physical-Biological Coupling in the Western South China Sea: The Response of Phytoplankton Community to a Mesoscale Cyclonic Eddy

PubMed Central

Wang, Lei; Huang, Bangqin; Chiang, Kuo-Ping; Liu, Xin; Chen, Bingzhang; Xie, Yuyuan; Xu, Yanping; Hu, Jianyu; Dai, Minhan

2016-01-01

It is widely recognized that the mesoscale eddies play an important part in the biogeochemical cycle in ocean ecosystem, especially in the oligotrophic tropical zones. So here a heterogeneous cyclonic eddy in its flourishing stage was detected using remote sensing and in situ biogeochemical observation in the western South China Sea (SCS) in early September, 2007. The high-performance liquid chromatography method was used to identify the photosynthetic pigments. And the CHEMical TAXonomy (CHEMTAX) was applied to calculate the contribution of nine phytoplankton groups to the total chlorophyll a (TChl a) biomass. The deep chlorophyll a maximum layer (DCML) was raised to form a dome structure in the eddy center while there was no distinct enhancement for TChl a biomass. The integrated TChl a concentration in the upper 100 m water column was also constant from the eddy center to the surrounding water outside the eddy. However the TChl a biomass in the surface layer (at 5 m) in the eddy center was promoted 2.6-fold compared to the biomass outside the eddy (p < 0.001). Thus, the slight enhancement of TChl a biomass of euphotic zone integration within the eddy was mainly from the phytoplankton in the upper mixed zone rather than the DCML. The phytoplankton community was primarily contributed by diatoms, prasinophytes, and Synechococcus at the DCML within the eddy, while less was contributed by haptophytes_8 and Prochlorococcus. The TChl a biomass for most of the phytoplankton groups increased at the surface layer in the eddy center under the effect of nutrient pumping. The doming isopycnal within the eddy supplied nutrients gently into the upper mixing layer, and there was remarkable enhancement in phytoplankton biomass at the surface layer with 10.5% TChl a biomass of water column in eddy center and 3.7% at reference stations. So the slight increasing in the water column integrated phytoplankton biomass might be attributed to the stimulated phytoplankton biomass at the surface layer. PMID:27088991

Impact of change in climate and policy from 1988 to 2007 on environmental and microbial variables at the time series station Boknis Eck, Baltic Sea

NASA Astrophysics Data System (ADS)

Hoppe, H.-G.; Giesenhagen, H. C.; Koppe, R.; Hansen, H.-P.; Gocke, K.

2013-07-01

Phytoplankton and bacteria are sensitive indicators of environmental change. The temporal development of these key organisms was monitored from 1988 to the end of 2007 at the time series station Boknis Eck in the western Baltic Sea. This period was characterized by the adaption of the Baltic Sea ecosystem to changes in the environmental conditions caused by the conversion of the political system in the southern and eastern border states, accompanied by the general effects of global climate change. Measured variables were chlorophyll, primary production, bacteria number, -biomass and -production, glucose turnover rate, macro-nutrients, pH, temperature and salinity. Negative trends with time were recorded for chlorophyll, bacteria number, bacterial biomass and bacterial production, nitrate, ammonia, phosphate, silicate, oxygen and salinity while temperature, pH, and the ratio between bacteria numbers and chlorophyll increased. Strongest reductions with time occurred for the annual maximum values, e.g. for chlorophyll during the spring bloom or for nitrate during winter, while the annual minimum values remained more stable. In deep water above sediment the negative trends of oxygen, nitrate, phosphate and bacterial variables as well as the positive trend of temperature were similar to those in the surface while the trends of salinity, ammonia and silicate were opposite to those in the surface. Decreasing oxygen, even in the surface layer, was of particular interest because it suggested enhanced recycling of nutrients from the deep hypoxic zones to the surface by vertical mixing. The long-term seasonal patterns of all variables correlated positively with temperature, except chlorophyll and salinity. Salinity correlated negatively with all bacterial variables (as well as precipitation) and positively with chlorophyll. Surprisingly, bacterial variables did not correlate with chlorophyll, which may be inherent with the time lag between the peaks of phytoplankton and bacteria during spring. Compared to the 20-yr averages of the environmental and microbial variables, the strongest negative deviations of corresponding annual averages were measured about ten years after political change for nitrate and bacterial secondary production (~ -60%), followed by chlorophyll (-50%) and bacterial biomass (-40%). Considering the circulation of surface currents in the Baltic Sea we interpret the observed patterns of the microbial variables at the Boknis Eck time series station as a consequence of the improved management of water resources after 1989 and - to a minor extent - the trends of the climate variables salinity and temperature.

Impact of change in climate and policy from 1988 to 2007 on environmental and microbial variables at the time series station Boknis Eck, Baltic Sea

NASA Astrophysics Data System (ADS)

Hoppe, H.-G.; Giesenhagen, H. C.; Koppe, R.; Hansen, H.-P.; Gocke, K.

2012-12-01

Phytoplankton and bacteria are sensitive indicators of environmental change. The temporal development of these key organisms was monitored from 1988 to the end of 2007 at the time series station Boknis Eck in the Western Baltic Sea. This period was characterized by the adaption of the Baltic Sea ecosystem to changes in the environmental conditions caused by the collapse and conversion of the political system in the Southern and Eastern Border States, accompanied by the general effects of global climate change. Measured variables were chlorophyll, primary production, bacteria number, -biomass and -production, glucose turnover rate, macro-nutrients, pH, temperature and salinity. Negative trends with time were recorded for chlorophyll, the bacterial variables, nitrate, ammonia, phosphate, silicate, oxygen and salinity while temperature, pH, and the ratio between bacteria numbers and chlorophyll increased. The strongest reductions with time occurred for the annual maximum values, e.g. for chlorophyll during the spring bloom or for nitrate during winter, while the annual minimum values remained more stable. In deep water above sediment the negative trends of oxygen, nitrate, phosphate and bacterial variables as well as the positive trend of temperature were similar to those in the surface while the trends of salinity, ammonia and silicate were opposite to those in the surface. Decreasing oxygen even in the surface layer was of particular interest because it suggested enhanced recycling of nutrients from the deep hypoxic zones to the surface by vertical mixing. In the long run all variables correlated positively with temperature, except chlorophyll and salinity. Salinity correlated negatively with all bacterial variables as well as precipitation and positively with chlorophyll. Surprisingly, bacterial variables did not correlate with chlorophyll which may be inherent with the time lag between the peaks of phytoplankton and bacteria during spring. Compared to the 20-yr averages of the environmental and microbial variables, the strongest negative deviations of corresponding annual averages were measured about ten years after political change for nitrate and bacterial secondary production (~ -60%), followed by chlorophyll (-50%) and bacterial biomass (-40%). Considering the circulation of surface currents in the Baltic Sea we conclude that the improved management of water resources after 1989 together with the trends of the climate variables salinity and temperature were responsible for the observed patterns of the microbial variables at the Boknis Eck time series station.

The features of chlorophyll concentration long-standing dynamics in the ocean surface layer (comparison of czcs and seawifs data)

NASA Astrophysics Data System (ADS)

Shevyrnogov, A.; Vysotskaya, G.

To preserve biosphere and make its utilization expedient makes imperative to comprehend in depth long-standing dynamics of the primary production process on our planet. Variability of chlorophyll concentration in the ocean is one of the most important components of this process. However, hard access and large size of the water surface make its investigation labor-consuming. Besides, the dependence of primary production on high variability of hydrophysical phenomena in the ocean (fluctuations of currents, frontal zones, etc.) makes the location of points for measuring the chlorophyll concentration dynamics significant. In this work the long-standing changes in chlorophyll concentration in the surface layer of the ocean have been analyzed on the basis of the CZCS data for 7.5 years and the SeaWiFS data from 1997 to 2003. It was shown that the average chlorophyll concentration calculated at all investigated area is varied moderately. However when analyzing spatially local trends, it was detected that areas exist with stable rise and fall of chlorophyll concentration. Some interesting features of the long-standing dynamics of chlorophyll concentration several interesting features were found. There are the various directions of long-term trends (constant increase or decrease) that cannot be explained only by large-scale hydrological phenomena in the ocean (currents, upwellings etc.). The next feature is a difference between the trends revealed by using the CZCS data and the trends based on the SeaWiFS data. Thus, the obtained results allow the possibility of identification of the ocean biota role in the global biospheric gas exchange.

Sequential resuspension of biofilm components (viruses, prokaryotes and protists) as measured by erodimetry experiments in the Brouage mudflat (French Atlantic coast)

NASA Astrophysics Data System (ADS)

Dupuy, Christine; Mallet, Clarisse; Guizien, Katell; Montanié, Hélène; Bréret, Martine; Mornet, Françoise; Fontaine, Camille; Nérot, Caroline; Orvain, Francis

2014-09-01

Resuspension thresholds in terms of friction velocity were experimentally quantified for the prokaryotes, protists and for the first time, viruses of intertidal mudflat biofilms. Differences in resuspension thresholds could be related to the type, behaviour and size of microorganisms and their association with particles. Free microorganisms (viruses, bacteria and some nanoflagellates) were resuspended by weak flow at friction velocities lower than 2 cm s- 1. Chlorophyll a, some nanoflagellates and attached bacteria were resuspended together with the bed's muddy sediment, which required friction velocities larger than 3 cm s- 1. Diatoms smaller than 60 μm were resuspended at velocities between 3 and 5 cm s- 1, while those larger than 60 μm were resuspended at higher friction velocities (5.5 to 6.5 cm s- 1). The thresholds of resuspension also depended on the micro-scale position of microorganisms in the sediment (horizontal and vertical distributions). In the field, the vertical distribution of chlorophyll a (a proxy of microphytobenthos) was skewed, with a maximum in the first 2 mm of sediment. Along the neap-spring tidal cycle, chlorophyll a revealed an increase in MPB biomass in the first 2 mm of the sediment, in relation to light increases with exposure durations. The horizontal distribution of chlorophyll a could be inferred from erosion experiments. During the initial phase of biofilm growth, the distribution of chlorophyll a seemed horizontally homogeneous, and was uniformly eroded at the beginning of the increase in chlorophyll a. From these results, we can make a hypothesis: in the subsequent phase of biofilm growth until the maximum of emersion duration, the eroded quantity of chlorophyll a was larger than expected based from chlorophyll a vertical distribution, suggesting that biofilm horizontal distribution became patchy and enriched chlorophyll a was preferentially eroded. When emersion duration and biofilm growth decreased, the trend was reversed, and eroded quantity of chlorophyll a was lower than expected from chlorophyll a vertical distribution, suggesting that areas with low chlorophyll a were preferentially eroded. Such erosion patterns when biofilm growth decreased probably resulted from the bulldozing activity of a surficial sediment bioturbator, the gastropod Peringia ulvae. Our study did not directly prove this horizontal distribution but it should be further discussed. This distribution needs to be studied to acquire real evidence of patchy distributions.

Mixing and the dynamics of the deep chlorophyll maximum in Lake Tahoe

NASA Technical Reports Server (NTRS)

Abbott, M. R.; Denman, K. L.; Powell, T. M.; Richerson, P. J.; Richards, R. C.; Goldman, C. R.

1984-01-01

Chlorophyll-temperature profiles were measured across Lake Tahoe about every 10 days from April through July 1980. Analysis of the 123 profiles and associated productivity and nutrient data identified three important processes in the formation and dynamics of the deep chlorophyll maximum (DCM): turbulent diffusion, nutrient supply rate, and light availability. Seasonal variation in these three processes resulted in three regimes: a diffusion-dominated regime with a weak DCM, a variable-mixing regime with a pronounced, nutrient supply-dominated DCM, and a stable regime with a deep, moderate light availability-dominated DCM. The transition between the first two regimes occurred in about 10 days, the transition between the last two more gradually over about 3 weeks. The degree of spatial variability of the DCM was highest in the second regime and lowest in the third. These data indicate that the DCM in Lake Tahoe is constant in neither time nor space.

A Spectrally Selective Attenuation Mechanism-Based Kpar Algorithm for Biomass Heating Effect Simulation in the Open Ocean

NASA Astrophysics Data System (ADS)

Chen, Jun; Zhang, Xiangguang; Xing, Xiaogang; Ishizaka, Joji; Yu, Zhifeng

2017-12-01

Quantifying the diffuse attenuation coefficient of the photosynthetically available radiation (Kpar) can improve our knowledge of euphotic depth (Zeu) and biomass heating effects in the upper layers of oceans. An algorithm to semianalytically derive Kpar from remote sensing reflectance (Rrs) is developed for the global open oceans. This algorithm includes the following two portions: (1) a neural network model for deriving the diffuse attention coefficients (Kd) that considers the residual error in satellite Rrs, and (2) a three band depth-dependent Kpar algorithm (TDKA) for describing the spectrally selective attenuation mechanism of underwater solar radiation in the open oceans. This algorithm is evaluated with both in situ PAR profile data and satellite images, and the results show that it can produce acceptable PAR profile estimations while clearly removing the impacts of satellite residual errors on Kpar estimations. Furthermore, the performance of the TDKA algorithm is evaluated by its applicability in Zeu derivation and mean temperature within a mixed layer depth (TML) simulation, and the results show that it can significantly decrease the uncertainty in both compared with the classical chlorophyll-a concentration-based Kpar algorithm. Finally, the TDKA algorithm is applied in simulating biomass heating effects in the Sargasso Sea near Bermuda, with new Kpar data it is found that the biomass heating effects can lead to a 3.4°C maximum positive difference in temperature in the upper layers but could result in a 0.67°C maximum negative difference in temperature in the deep layers.

Studies on the performance of TiO{sub 2} thin films as protective layer to chlorophyll in Ocimum tenuiflorum L from UV radiation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Malliga, P.; Selvi, B. Karunai; Pandiarajan, J.

Thin films of TiO{sub 2} were prepared on glass substrates using sol-gel dip coating technique. The films with 10 coatings were prepared and annealed at temperatures 350°C, 450°C and 550°C for 1 hour in muffle furnace. The annealed films were characterized by X – Ray diffraction (XRD), UV – Visible, AFM, Field Effect Scanning Electron Microscopy (FESEM) and EDAX studies. Chlorophyll has many health benefits due to its structural similarity to human blood and its good chelating ability. It has antimutagenic and anticarcinogenic properties. UV light impairs photosynthesis and reduces size, productivity, and quality in many of the crop plantmore » species. Increased exposure of UV light reduces chlorophyll contents a, b and total content in plants. Titanium Dioxide (TiO{sub 2}) is a wide band gap semiconductor and efficient light harvester. TiO{sub 2} has strong UltraViolet (UV) light absorbing capability. Here, we have studied the performance of TiO{sub 2} thin films as a protective layer to the chlorophyll contents present in medicinal plant, tulsi (Ocimum tenuiflorum L) from UV radiation. The study reveals that crystallite size increases, transmittance decreases and chlorophyll contents increases with increase in annealing temperature. This study showed that TiO{sub 2} thin films are good absorber of UV light and protect the chlorophyll contents a, b and total content in medicinal plants.« less

Physical control of interannual variations of the winter chlorophyll bloom in the northern Arabian Sea

NASA Astrophysics Data System (ADS)

Girijakumari Keerthi, Madhavan; Lengaigne, Matthieu; Levy, Marina; Vialard, Jerome; Parvathi, Vallivattathillam; de Boyer Montégut, Clément; Ethé, Christian; Aumont, Olivier; Suresh, Iyyappan; Parambil Akhil, Valiya; Moolayil Muraleedharan, Pillathu

2017-08-01

The northern Arabian Sea hosts a winter chlorophyll bloom, triggered by convective overturning in response to cold and dry northeasterly monsoon winds. Previous studies of interannual variations of this bloom only relied on a couple of years of data and reached no consensus on the associated processes. The current study aims at identifying these processes using both ˜ 10 years of observations (including remotely sensed chlorophyll data and physical parameters derived from Argo data) and a 20-year-long coupled biophysical ocean model simulation. Despite discrepancies in the estimated bloom amplitude, the six different remotely sensed chlorophyll products analysed in this study display a good phase agreement at seasonal and interannual timescales. The model and observations both indicate that the interannual winter bloom fluctuations are strongly tied to interannual mixed layer depth anomalies ( ˜ 0.6 to 0.7 correlation), which are themselves controlled by the net heat flux at the air-sea interface. Our modelling results suggest that the mixed layer depth control of the bloom amplitude ensues from the modulation of nutrient entrainment into the euphotic layer. In contrast, the model and observations both display insignificant correlations between the bloom amplitude and thermocline depth, which precludes a control of the bloom amplitude by daily dilution down to the thermocline depth, as suggested in a previous study.

Ambiguous dependence of fluorescence intensity of trees on chlorophyll concentration

NASA Astrophysics Data System (ADS)

Zavoruev, Valeriy V.; Zavorueva, Elena N.

2014-11-01

Using fluorimetry Junior PAM (Heinz Walz GmbH, Germany) fluorescence parameters of leaves Prinsepia sinensis, Crataegus chlorocarca M, Acer negúndo, Bétula péndula are studied. It was found that the dependence of maximum fluorescence (Fm) plants on the concentration of chlorophyll depends on the sampling method during of vegetation. The correctness of sampling proves during vegetation is substantiated.

Best of both worlds: simultaneous high-light and shade-tolerance adaptations within individual leaves of the living stone Lithops aucampiae.

PubMed

Field, Katie J; George, Rachel; Fearn, Brian; Quick, W Paul; Davey, Matthew P

2013-01-01

"Living stones" (Lithops spp.) display some of the most extreme morphological and physiological adaptations in the plant kingdom to tolerate the xeric environments in which they grow. The physiological mechanisms that optimise the photosynthetic processes of Lithops spp. while minimising transpirational water loss in both above- and below-ground tissues remain unclear. Our experiments have shown unique simultaneous high-light and shade-tolerant adaptations within individual leaves of Lithops aucampiae. Leaf windows on the upper surfaces of the plant allow sunlight to penetrate to photosynthetic tissues within while sunlight-blocking flavonoid accumulation limits incoming solar radiation and aids screening of harmful UV radiation. Increased concentration of chlorophyll a and greater chlorophyll a:b in above-ground regions of leaves enable maximum photosynthetic use of incoming light, while inverted conical epidermal cells, increased chlorophyll b, and reduced chlorophyll a:b ensure maximum absorption and use of low light levels within the below-ground region of the leaf. High NPQ capacity affords physiological flexibility under variable natural light conditions. Our findings demonstrate unprecedented physiological flexibility in a xerophyte and further our understanding of plant responses and adaptations to extreme environments.

Chlorophyll a Covalently Bonded to Organo-Modified Translucent Silica Xerogels: Optimizing Fluorescence and Maximum Loading.

PubMed

García-Sánchez, M A; Serratos, I N; Sosa, R; Tapia-Esquivel, T; González-García, F; Rojas-González, F; Tello-Solís, S R; Palacios-Enriquez, A Y; Esparza Schulz, J M; Arrieta, A

2016-07-22

Chlorophyll is a pyrrolic pigment with important optical properties, which is the reason it has been studied for many years. Recently, interest has been rising with respect to this molecule because of its outstanding physicochemical properties, particularly applicable to the design and development of luminescent materials, hybrid sensor systems, and photodynamic therapy devices for the treatment of cancer cells and bacteria. More recently, our research group has been finding evidence for the possibility of preserving these important properties of substrates containing chlorophyll covalently incorporated within solid pore matrices, such as SiO₂, TiO₂ or ZrO₂ synthesized through the sol-gel process. In this work, we study the optical properties of silica xerogels organo-modified on their surface with allyl and phenyl groups and containing different concentrations of chlorophyll bonded to the pore walls, in order to optimize the fluorescence that these macrocyclic species displays in solution. The intention of this investigation was to determine the maximum chlorophyll a concentration at which this molecule can be trapped inside the pores of a given xerogel and to ascertain if this pigment remains trapped as a monomer, a dimer, or aggregate. Allyl and phenyl groups were deposited on the surface of xerogels in view of their important effects on the stability of the molecule, as well as over the fluorescence emission of chlorophyll; however, these organic groups allow the trapping of either chlorophyll a monomers or dimers. The determination of the above parameters allows finding the most adequate systems for subsequent in vitro or in vivo studies. The characterization of the obtained xerogels was performed through spectroscopic absorption, emission and excitation spectra. These hybrid systems can be employed as mimics of natural systems; the entrapment of chlorophyll inside pore matrices indicates that it is possible to exploit some of the most physicochemical properties of trapped chlorophyll for diverse technological applications. The data herein collected suggest the possibility of applying the developed methodology to other active, captive molecules in order to synthesize new hybrid materials with optimized properties, suitable to be applied in diverse technological fields.

Response of ocean ecosystems to climate warming

NASA Astrophysics Data System (ADS)

Sarmiento, J. L.; Slater, R.; Barber, R.; Bopp, L.; Doney, S. C.; Hirst, A. C.; Kleypas, J.; Matear, R.; Mikolajewicz, U.; Monfray, P.; Soldatov, V.; Spall, S. A.; Stouffer, R.

2004-09-01

We examine six different coupled climate model simulations to determine the ocean biological response to climate warming between the beginning of the industrial revolution and 2050. We use vertical velocity, maximum winter mixed layer depth, and sea ice cover to define six biomes. Climate warming leads to a contraction of the highly productive marginal sea ice biome by 42% in the Northern Hemisphere and 17% in the Southern Hemisphere, and leads to an expansion of the low productivity permanently stratified subtropical gyre biome by 4.0% in the Northern Hemisphere and 9.4% in the Southern Hemisphere. In between these, the subpolar gyre biome expands by 16% in the Northern Hemisphere and 7% in the Southern Hemisphere, and the seasonally stratified subtropical gyre contracts by 11% in both hemispheres. The low-latitude (mostly coastal) upwelling biome area changes only modestly. Vertical stratification increases, which would be expected to decrease nutrient supply everywhere, but increase the growing season length in high latitudes. We use satellite ocean color and climatological observations to develop an empirical model for predicting chlorophyll from the physical properties of the global warming simulations. Four features stand out in the response to global warming: (1) a drop in chlorophyll in the North Pacific due primarily to retreat of the marginal sea ice biome, (2) a tendency toward an increase in chlorophyll in the North Atlantic due to a complex combination of factors, (3) an increase in chlorophyll in the Southern Ocean due primarily to the retreat of and changes at the northern boundary of the marginal sea ice zone, and (4) a tendency toward a decrease in chlorophyll adjacent to the Antarctic continent due primarily to freshening within the marginal sea ice zone. We use three different primary production algorithms to estimate the response of primary production to climate warming based on our estimated chlorophyll concentrations. The three algorithms give a global increase in primary production of 0.7% at the low end to 8.1% at the high end, with very large regional differences. The main cause of both the response to warming and the variation between algorithms is the temperature sensitivity of the primary production algorithms. We also show results for the period between the industrial revolution and 2050 and 2090.

Variegation in Arum italicum leaves. A structural-functional study.

PubMed

La Rocca, Nicoletta; Rascio, Nicoletta; Pupillo, Paolo

2011-12-01

The presence of pale-green flecks on leaves (speckling) is a frequent character among herbaceous species from shady places and is usually due to local loosening of palisade tissue (air space type of variegation). In the winter-green Arum italicum L. (Araceae), dark-green areas of variegated leaf blades are ca. 400 μm thick with a chlorophyll content of 1080 mg m⁻² and a palisade parenchyma consisting of a double layer of oblong cells. Pale-green areas are 25% thinner, have 26% less chlorophyll and contain a single, loose layer of short palisade cells. Full-green leaves generally present only one compact layer of cylindrical palisade cells and the same pigment content as dark-green sectors, but the leaf blade is 13% thinner. A spongy parenchyma with extensive air space is present in all leaf types. Green cells of all tissues have normal chloroplasts. Assays of photosynthetic activities by chlorophyll fluorescence imaging and O₂ exchange measurements showed that variegated pale-green and dark-green sectors as well as full-green leaves have comparable photosynthetic activities on a leaf area basis at saturating illumination. However, full-green leaves require a higher saturating light with respect to variegated sectors, and pale-green sectors support relatively higher photosynthesis rates on a chlorophyll basis. We conclude that i) variegation in this species depends on number and organization of palisade cell layers and can be defined as a "variable palisade" type, and ii) the variegated habit has no limiting effects on the photosynthetic energy budget of A. italicum, consistent with the presence of variegated plants side by side to full-green ones in natural populations. Copyright © 2011 Elsevier Masson SAS. All rights reserved.

Spatial variability of concentrations of chlorophyll a, dissolved organic matter and suspended particles in the surface layer of the Kara Sea in September 2011 from lidar data

NASA Astrophysics Data System (ADS)

Pelevin, V. V.; Zavjalov, P. O.; Belyaev, N. A.; Konovalov, B. V.; Kravchishina, M. D.; Mosharov, S. A.

2017-01-01

The article presents results of underway remote laser sensing of the surface water layer in continuous automatic mode using the UFL-9 fluorescent lidar onboard the R/V Akademik Mstislav Keldysh during cruise 59 in the Kara Sea in 2011. The description of the lidar, the approach to interpreting seawater fluorescence data, and certain methodical aspects of instrument calibration and measurement are presented. Calibration of the lidar is based on laboratory analysis of water samples taken from the sea surface during the cruise. Spatial distribution of chlorophyll a, total organic carbon and suspended matter concentrations in the upper quasi-homogeneous layer are mapped and the characteristic scales of the variability are estimated. Some dependencies between the patchiness of the upper water layer and the atmospheric forcing and freshwater runoff are shown.

An assessment of phytoplankton primary productivity in the Arctic Ocean from satellite ocean color/in situ chlorophyll‐a based models

PubMed Central

Matrai, Patricia A.; Friedrichs, Marjorie A. M.; Saba, Vincent S.; Antoine, David; Ardyna, Mathieu; Asanuma, Ichio; Babin, Marcel; Bélanger, Simon; Benoît‐Gagné, Maxime; Devred, Emmanuel; Fernández‐Méndez, Mar; Gentili, Bernard; Hirawake, Toru; Kang, Sung‐Ho; Kameda, Takahiko; Katlein, Christian; Lee, Sang H.; Lee, Zhongping; Mélin, Frédéric; Scardi, Michele; Smyth, Tim J.; Tang, Shilin; Turpie, Kevin R.; Waters, Kirk J.; Westberry, Toby K.

2015-01-01

Abstract We investigated 32 net primary productivity (NPP) models by assessing skills to reproduce integrated NPP in the Arctic Ocean. The models were provided with two sources each of surface chlorophyll‐a concentration (chlorophyll), photosynthetically available radiation (PAR), sea surface temperature (SST), and mixed‐layer depth (MLD). The models were most sensitive to uncertainties in surface chlorophyll, generally performing better with in situ chlorophyll than with satellite‐derived values. They were much less sensitive to uncertainties in PAR, SST, and MLD, possibly due to relatively narrow ranges of input data and/or relatively little difference between input data sources. Regardless of type or complexity, most of the models were not able to fully reproduce the variability of in situ NPP, whereas some of them exhibited almost no bias (i.e., reproduced the mean of in situ NPP). The models performed relatively well in low‐productivity seasons as well as in sea ice‐covered/deep‐water regions. Depth‐resolved models correlated more with in situ NPP than other model types, but had a greater tendency to overestimate mean NPP whereas absorption‐based models exhibited the lowest bias associated with weaker correlation. The models performed better when a subsurface chlorophyll‐a maximum (SCM) was absent. As a group, the models overestimated mean NPP, however this was partly offset by some models underestimating NPP when a SCM was present. Our study suggests that NPP models need to be carefully tuned for the Arctic Ocean because most of the models performing relatively well were those that used Arctic‐relevant parameters. PMID:27668139

Separation, identification and quantification of carotenoids and chlorophylls in dietary supplements containing Chlorella vulgaris and Spirulina platensis using High Performance Thin Layer Chromatography.

PubMed

Hynstova, Veronika; Sterbova, Dagmar; Klejdus, Borivoj; Hedbavny, Josef; Huska, Dalibor; Adam, Vojtech

2018-01-30

In this study, 14 commercial products (dietary supplements) containing alga Chlorella vulgaris and cyanobacteria Spirulina platensis, originated from China and Japan, were analysed. UV-vis spectrophotometric method was applied for rapid determination of chlorophylls, carotenoids and pheophytins; as degradation products of chlorophylls. High Performance Thin-Layer Chromatography (HPTLC) was used for effective separation of these compounds, and also Atomic Absorption Spectrometry for determination of heavy metals as indicator of environmental pollution. Based on the results obtained from UV-vis spectrophotometric determination of photosynthetic pigments (chlorophylls and carotenoids), it was confirmed that Chlorella vulgaris contains more of all these pigments compared to the cyanobacteria Spirulina platensis. The fastest mobility compound identified in Chlorella vulgaris and Spirulina platensis using HPTLC method was β-carotene. Spectral analysis and standard calibration curve method were used for identification and quantification of separated substances on Thin-Layer Chromatographic plate. Quantification of copper (Cu 2+ , at 324.7 nm) and zinc (Zn 2+ , at 213.9nm) was performed using Flame Atomic Absorption Spectrometry with air-acetylene flame atomization. Quantification of cadmium (Cd 2+ , at 228.8 nm), nickel (Ni 2+ , at 232.0nm) and lead (Pb 2+ , at 283.3nm) by Electrothermal Graphite Furnace Atomic Absorption Spectrometry; and quantification of mercury (Hg 2+ , at 254nm) by Cold Vapour Atomic Absorption Spectrometry. Copyright © 2017 Elsevier B.V. All rights reserved.

Leaf Optical Properties in Higher Plants: Linking Spectral Characteristics to Stress and Chlorophyll Concentration

NASA Technical Reports Server (NTRS)

Carter, Gregory A.; Knapp, Alan K.

2000-01-01

A number of studies have linked responses in leaf spectral reflectance, transmittance or absorptance to physiological stress. A variety of stressors including dehydration, flooding,freezing, ozone, herbicides, competition, disease, insects and deficiencies in ectomycorrhizal development and N fertilization have been imposed on species ranging from grasses to conifers and deciduous trees. In this cases, the maximum difference in reflectance within the 400 - 850 nm wavelength range between control and stressed states occurred as a reflectance increase at wavelength near 700 nm. In studies that included transmittance and absorptance as well as reflectance, maximum differences occurred as increases and decreases, respectively, near 700 nm. This common optical response to stress could be simulated closely by varying the chlorophyll concentrations in senescent leaves of five species. The optical response to stress near 700 nm, as well as corresponding changes in reflectance that occur in the green-yellow spectrum, can be explained by the general tendency of stress to reduce leaf chlorophyll concentration.

Chlorophyll-Based Organic-Inorganic Heterojunction Solar Cells.

PubMed

Li, Yue; Zhao, Wenjie; Li, Mengzhen; Chen, Gang; Wang, Xiao-Feng; Fu, Xueqi; Kitao, Osamu; Tamiaki, Hitoshi; Sakai, Kotowa; Ikeuchi, Toshitaka; Sasaki, Shin-Ichi

2017-08-10

Solid-state chlorophyll solar cells (CSCs) employing a carboxylated chlorophyll derivative, methyl trans-3 2 -carboxypyropheophorbide a, as a light-harvesting dye sensitizer chlorophyll (DSC) deposited on mesoporous TiO 2 , on which four zinc hydroxylated chlorophyll derivatives were spin-coated for hole transporter chlorophylls (HTCs), are described. Key parameters, including the effective carrier mobility of the HTC films, as determined by the space charge-limited current method, and the frontier molecular orbitals of these DSCs and HTCs, as estimated from cyclic voltammetry and electronic absorption spectra, suggest that both charge separation and carrier transport are favorable. The power conversion efficiencies (PCEs) of the present CSCs with fluorine-doped tin oxide (FTO)/TiO 2 /DSC/HTCs/Ag were determined to follow the order of HTC-1>HTC-2>HTC-3>HTC-4, which coincided perfectly with the order of their hole mobilities. The maximum PCE achieved was 0.86 % with HTC-1. The photovoltaic devices studied herein with two types of chlorophyll derivatives as dye sensitizers and hole transporters provide a unique solution for the utilization of solar energy with a view to truly realizing "green energy". © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Cryptic oxygen cycling in anoxic marine zones.

PubMed

Garcia-Robledo, Emilio; Padilla, Cory C; Aldunate, Montserrat; Stewart, Frank J; Ulloa, Osvaldo; Paulmier, Aurélien; Gregori, Gerald; Revsbech, Niels Peter

2017-08-01

Oxygen availability drives changes in microbial diversity and biogeochemical cycling between the aerobic surface layer and the anaerobic core in nitrite-rich anoxic marine zones (AMZs), which constitute huge oxygen-depleted regions in the tropical oceans. The current paradigm is that primary production and nitrification within the oxic surface layer fuel anaerobic processes in the anoxic core of AMZs, where 30-50% of global marine nitrogen loss takes place. Here we demonstrate that oxygenic photosynthesis in the secondary chlorophyll maximum (SCM) releases significant amounts of O 2 to the otherwise anoxic environment. The SCM, commonly found within AMZs, was dominated by the picocyanobacteria Prochlorococcus spp. Free O 2 levels in this layer were, however, undetectable by conventional techniques, reflecting a tight coupling between O 2 production and consumption by aerobic processes under apparent anoxic conditions. Transcriptomic analysis of the microbial community in the seemingly anoxic SCM revealed the enhanced expression of genes for aerobic processes, such as nitrite oxidation. The rates of gross O 2 production and carbon fixation in the SCM were found to be similar to those reported for nitrite oxidation, as well as for anaerobic dissimilatory nitrate reduction and sulfate reduction, suggesting a significant effect of local oxygenic photosynthesis on Pacific AMZ biogeochemical cycling.

Function of terahertz spectra in monitoring the decomposing process of biological macromolecules and in investigating the causes of photoinhibition.

PubMed

Qu, Yuangang; Zhang, Shuai; Lian, Yuji; Kuang, Tingyun

2017-03-01

Chlorophyll a and β-carotene play an important role in harvesting light energy, which is used to drive photosynthesis in plants. In this study, terahertz (THz) and visible range spectra of chlorophyll a and β-carotene and their changes under light treatment were investigated. The results show that the all THz transmission and absorption spectra of chlorophyll a and β-carotene changed upon light treatment, with the maximum changes at 15 min of illumination indicating the greatest changes of the collective vibrational mode of chlorophyll a and β-carotene. The absorption spectra of chlorophyll a in the visible light region decreased upon light treatment, signifying the degradation of chlorophyll a molecules. It can be inferred from these results that the THz spectra are very sensitive in monitoring the changes of the collective vibrational mode, despite the absence of changes in molecular configuration. The THz spectra can therefore be used to monitor the decomposing process of biological macromolecules; however, visible absorption spectra can only be used to monitor the breakdown extent of biological macromolecules.

Optimalisation of remote sensing algorithm in mapping of chlorophyl-a concentration at Pasuruan coastal based on surface reflectance images of Aqua Modis

NASA Astrophysics Data System (ADS)

Wibisana, H.; Zainab, S.; Dara K., A.

2018-01-01

Chlorophyll-a is one of the parameters used to detect the presence of fish populations, as well as one of the parameters to state the quality of a water. Research on chlorophyll concentrations has been extensively investigated as well as with chlorophyll-a mapping using remote sensing satellites. Mapping of chlorophyll concentration is used to obtain an optimal picture of the condition of waters that is often used as a fishing area by the fishermen. The role of remote sensing is a technological breakthrough in broadly monitoring the condition of waters. And in the process to get a complete picture of the aquatic conditions it would be used an algorithm that can provide an image of the concentration of chlorophyll at certain points scattered in the research area of capture fisheries. Remote sensing algorithms have been widely used by researchers to detect the presence of chlorophyll content, where the channels corresponding to the mapping of chlorophyll -concentrations from Landsat 8 images are canals 4, 3 and 2. With multiple channels from Landsat-8 satellite imagery used for chlorophyll detection, optimum algorithmic search can be formulated to obtain maximum results of chlorophyll-a concentration in the research area. From the calculation of remote sensing algorithm hence can be known the suitable algorithm for condition at coast of Pasuruan, where green channel give good enough correlation equal to R2 = 0,853 with algorithm for Chlorophyll-a (mg / m3) = 0,093 (R (-0) Red - 3,7049, from this result it can be concluded that there is a good correlation of the green channel that can illustrate the concentration of chlorophyll scattered along the coast of Pasuruan

Physical Forcing Mechanisms Controlling the Variability of Chlorophyll-a over the Royal-Charlotte and Abrolhos Banks—Eastern Brazilian Shelf

PubMed Central

Ghisolfi, Renato David; Pereira da Silva, Meyre; Thomaz dos Santos, Felipe; Servino, Ricardo Nogueira; Cirano, Mauro; Thompson, Fabiano Lopes

2015-01-01

The Abrolhos Bank is part of the so-called Eastern Brazilian Shelf and is an area of high ecological and economic importance. The bank supports the largest and richest coral reefs in the South Atlantic and the largest rhodolith bed in the world. The spatial and seasonal variation of phytoplankton concentration, however, and the dynamic processes controlling that variability have remained poorly known. The present study investigates the seasonal and spatial distributions of chlorophyll-a (Chl-a) and water conditions by analyzing nine years (2003–2011) of level-3 Moderate-resolution Imaging Spectroradiometer (MODIS) derived Chl-a, National Centers for Environmental Prediction (NCEP)/ETA model-derived winds, NCEP model-derived heat fluxes, thermohaline and velocity results from the Hybrid Circulation Ocean Model (HYCOM) 1/12o assimilated simulation. The results show that low/high concentrations occurred in austral spring-summer (wet season)/autumn-winter (dry season), with the highest values observed in the northern portion of the Abrolhos Bank. The typical meteorological and oceanographic conditions during austral summer favor the development of strong stratification. These conditions are 1) N-NE winds that favor an upwelling-type Ekman circulation; 2) coupling between the open ocean and the continental shelf through the western boundary current, which promotes cooler subsurface water to rise onto the shelf break; and 3) positive net heat flux. In contrast, the S-SE winds during autumn are in the opposite direction of the predominant current system over the Abrolhos Bank, thus reducing their speed and inducing an inverse shear. The warmer ocean and a somewhat cool and dry atmosphere promote the evaporative cooling of the surface layer. The above processes drive mixed layer cooling and deepening that reaches its maximum in winter. The blooming of phytoplankton in the Abrolhos Bank waters appears to be regulated by changes in the mixed layer depth, with Chl-a levels that start to increase during autumn and reach their peak in June-July. PMID:25700269

Physical forcing mechanisms controlling the variability of chlorophyll-a over the Royal-Charlotte and Abrolhos Banks-Eastern Brazilian Shelf.

PubMed

Ghisolfi, Renato David; Pereira da Silva, Meyre; Thomaz dos Santos, Felipe; Servino, Ricardo Nogueira; Cirano, Mauro; Thompson, Fabiano Lopes

2015-01-01

The Abrolhos Bank is part of the so-called Eastern Brazilian Shelf and is an area of high ecological and economic importance. The bank supports the largest and richest coral reefs in the South Atlantic and the largest rhodolith bed in the world. The spatial and seasonal variation of phytoplankton concentration, however, and the dynamic processes controlling that variability have remained poorly known. The present study investigates the seasonal and spatial distributions of chlorophyll-a (Chl-a) and water conditions by analyzing nine years (2003-2011) of level-3 Moderate-resolution Imaging Spectroradiometer (MODIS) derived Chl-a, National Centers for Environmental Prediction (NCEP)/ETA model-derived winds, NCEP model-derived heat fluxes, thermohaline and velocity results from the Hybrid Circulation Ocean Model (HYCOM) 1/12o assimilated simulation. The results show that low/high concentrations occurred in austral spring-summer (wet season)/autumn-winter (dry season), with the highest values observed in the northern portion of the Abrolhos Bank. The typical meteorological and oceanographic conditions during austral summer favor the development of strong stratification. These conditions are 1) N-NE winds that favor an upwelling-type Ekman circulation; 2) coupling between the open ocean and the continental shelf through the western boundary current, which promotes cooler subsurface water to rise onto the shelf break; and 3) positive net heat flux. In contrast, the S-SE winds during autumn are in the opposite direction of the predominant current system over the Abrolhos Bank, thus reducing their speed and inducing an inverse shear. The warmer ocean and a somewhat cool and dry atmosphere promote the evaporative cooling of the surface layer. The above processes drive mixed layer cooling and deepening that reaches its maximum in winter. The blooming of phytoplankton in the Abrolhos Bank waters appears to be regulated by changes in the mixed layer depth, with Chl-a levels that start to increase during autumn and reach their peak in June-July.

Productivity correlated to photobiochemical performance of Chlorella mass cultures grown outdoors in thin-layer cascades.

PubMed

Masojídek, Jiří; Kopecký, Jiří; Giannelli, Luca; Torzillo, Giuseppe

2011-02-01

This work aims to: (1) correlate photochemical activity and productivity, (2) characterize the flow pattern of culture layers and (3) determine a range of biomass densities for high productivity of the freshwater microalga Chlorella spp., grown outdoors in thin-layer cascade units. Biomass density, irradiance inside culture, pigment content and productivity were measured in the microalgae cultures. Chlorophyll-fluorescence quenching was monitored in situ (using saturation-pulse method) to estimate photochemical activities. Photobiochemical activities and growth parameters were studied in cultures of biomass density between 1 and 47 g L(-1). Fluorescence measurements showed that diluted cultures (1-2 g DW L(-1)) experienced significant photostress due to inhibition of electron transport in the PSII complex. The highest photochemical activities were achieved in cultures of 6.5-12.5 g DW L(-1), which gave a maximum daylight productivity of up to 55 g dry biomass m(-2) day(-1). A midday depression of maximum PSII photochemical yield (F (v)/F (m)) of 20-30% compared with morning values in these cultures proved to be compatible with well-performing cultures. Lower or higher depression of F (v)/F (m) indicated low-light acclimated or photo-inhibited cultures, respectively. A hydrodynamic model of the culture demonstrated highly turbulent flow allowing rapid light/dark cycles (with frequency of 0.5 s(-1)) which possibly match the turnover of the photosynthetic apparatus. These results are important from a biotechnological point of view for optimisation of growth of outdoor microalgae mass cultures under various climatic conditions.

The effectiveness of laser diode induction to Carica Papaya L. chlorophyll extract to be ROS generating in the photodynamic inactivation mechanisms for C.albicans biofilms

NASA Astrophysics Data System (ADS)

Dewi Astuty, S.; Baktir, A.

2017-05-01

Research on the effectiveness of photo inactivation of C.albicans biofilms led by a-PDT system mediated by chlorophyll-diode-laser-induced was done. This research was done using in vitro technique in order to effectively determine chlorophyll extract of ROS-generated Carica Papaya L. using in situ technique. This technique induced laser diode on different dose and C. albicans with reduced degree. This research is a preliminary study in efforts to find anew sensitizer agent candidate made of chlorophyll extract and antifungal of Carica Papaya L. The effectiveness of eradication has been tested with MDA’s content and OD of biomass biofilms as well as analyzed using ANOVA and Tukey Test (α=0.05). The characteristic of chlorophyll extract of Carica Papaya L. has maximum absorptions on blue areas (λmax = 420 nm) and red areas (λmax = 670 nm). The MIC value of Carica Papaya L.’schlorophyll extract against C. albicans planktonic and biofilms cell is 63.8 μM and 31.9 μM respectively. The result shows that treatment using laser which was combined with chlorophyll extract is more effective than that with laser only or chlorophyll extract only. The treatment using laser combined with chlorophyll extract obtained more than 65% (α=0.05) (more than that of negative control) for P2L1 group with OD595 0.915. The MDA’s content showed that group of laser which was mediated with chlorophyll extract had larger values than group of laser or chlorophyll extract only.

High-Performance Liquid Chromatography (HPLC) Measurements of Phytoplankton Pigment Distributions of Ocean Waters

DTIC Science & Technology

1988-11-01

coccolithophorids 19. ABSTRACT (CanMyw on rviosfe Inhcesway aM den*t byblock nmber) Until the application of high-performance liquid chromatography (HPLC) to... phycocyanin , has a maximum 0 01 absorption peak. The spectra for the 008 chlorophyll degradation products (chlo- 0.06 rophyllides, phaeophorbides and...phaeo- phytins) which are not shown in Figure z I have similar absorption maxima as their associated chlorophylls, 002 , Until the application of high

Chlorophyll b degradation by chlorophyll b reductase under high-light conditions.

PubMed

Sato, Rei; Ito, Hisashi; Tanaka, Ayumi

2015-12-01

The light-harvesting chlorophyll a/b binding protein complex of photosystem II (LHCII) is the main antenna complex of photosystem II (PSII). Plants change their LHCII content depending on the light environment. Under high-light conditions, the content of LHCII should decrease because over-excitation damages the photosystem. Chlorophyll b is indispensable for accumulating LHCII, and chlorophyll b degradation induces LHCII degradation. Chlorophyll b degradation is initiated by chlorophyll b reductase (CBR). In land plants, NON-YELLOW COLORING 1 (NYC1) and NYC1-Like (NOL) are isozymes of CBR. We analyzed these mutants to determine their functions under high-light conditions. During high-light treatment, the chlorophyll a/b ratio was stable in the wild-type (WT) and nol plants, and the LHCII content decreased in WT plants. The chlorophyll a/b ratio decreased in the nyc1 and nyc1/nol plants, and a substantial degree of LHCII was retained in nyc1/nol plants after the high-light treatment. These results demonstrate that NYC1 degrades the chlorophyll b on LHCII under high-light conditions, thus decreasing the LHCII content. After the high-light treatment, the maximum quantum efficiency of the PSII photochemistry was lower in nyc1 and nyc1/nol plants than in WT and nol plants. A larger light-harvesting system would damage PSII in nyc1 and nyc1/nol plants. The fluorescence spectroscopy of the leaves indicated that photosystem I was also damaged by the excess LHCII in nyc1/nol plants. These observations suggest that chlorophyll b degradation by NYC1 is the initial reaction for the optimization of the light-harvesting capacity under high-light conditions.

Ocean Primary Production Estimates from Terra MODIS and Their Dependency on Satellite Chlorophyll Alpha Algorithms

NASA Technical Reports Server (NTRS)

Essias, Wayne E.; Abbott, Mark; Carder, Kendall; Campbell, Janet; Clark, Dennis; Evans, Robert; Brown, Otis; Kearns, Ed; Kilpatrick, Kay; Balch, W.

2003-01-01

Simplistic models relating global satellite ocean color, temperature, and light to ocean net primary production (ONPP) are sensitive to the accuracy and limitations of the satellite estimate of chlorophyll and other input fields, as well as the primary productivity model. The standard MODIS ONPP product uses the new semi-analytic chlorophyll algorithm as its input for two ONPP indexes. The three primary MODIS chlorophyll Q estimates from MODIS, as well as the SeaWiFS 4 chlorophyll product, were used to assess global and regional performance in estimating ONPP for the full mission, but concentrating on 2001. The two standard ONPP algorithms were examined with 8-day and 39 kilometer resolution to quantify chlorophyll algorithm dependency of ONPP. Ancillary data (MLD from FNMOC, MODIS SSTD1, and PAR from the GSFC DAO) were identical. The standard MODIS ONPP estimates for annual production in 2001 was 59 and 58 GT C for the two ONPP algorithms. Differences in ONPP using alternate chlorophylls were on the order of 10% for global annual ONPP, but ranged to 100% regionally. On all scales the differences in ONPP were smaller between MODIS and SeaWiFS than between ONPP models, or among chlorophyll algorithms within MODIS. Largest regional ONPP differences were found in the Southern Ocean (SO). In the SO, application of the semi-analytic chlorophyll resulted in not only a magnitude difference in ONPP (2x), but also a temporal shift in the time of maximum production compared to empirical algorithms when summed over standard oceanic areas. The resulting increase in global ONPP (6-7 GT) is supported by better performance of the semi-analytic chlorophyll in the SO and other high chlorophyll regions. The differences are significant in terms of understanding regional differences and dynamics of ocean carbon transformations.

Nutrient Dynamics in the Northern South China Sea Shelf-sea (NoSoCS)

NASA Astrophysics Data System (ADS)

Wong, G. T.; Guo, X.

2011-12-01

The Northern South China Sea Shelf-sea (NoSoCS) is situated in the sub-tropics along the southern Chinese coast between the southern end of the Taiwan Strait and the Hainan Island. Samples were collected in four cross-shelf transects in summer, 2010 and two cross-shelf transects in winter, 2011 in this Shelf-sea. The shelf may be sub-divided into the inner shelf (<40 m, low water temperature, high chlorophyll concentration), the middle shelf (50-80 m), and the outer shelf (90-120 m, high water temperature, low nutrient and chlorophyll concentrations). The mixed layer depth and the top of the nutricline depth (at ~30 m in the summer and ~70 m in the winter) were shallower than the shelf break depth (~120 m) in both seasons. The relatively nutrient-rich upper nutricline water (>1 μM in NO3- and >0.1 μM in soluble reactive phosphate) stretched across the shelf at least to the middle shelf. Thus, vertical mixing, even to relatively shallow depths, on the shelf may supply nutrients to and play a critical role in determining the primary production in the mixed layer. At least three such processes were observed. Through the year, internal waves of various strengths generated at the Luzon Strait propagated westward along the bottom of the mixed layer and dissipated along the middle and outer shelf. The effects of these waves were especially conspicuous north of the Dongsha Atoll and their action enhances vertical mixing. In the summer, upwelling occurred in the inner/middle shelf off Dongshan in response to the along shore southwest monsoon and the topographic forcing by the ridge extending offshore from Dongshan to the Taiwan Bank. In the winter, surface cooling and the strong northeast monsoon led to complete overturn in the shelf. The maximum density, reaching 24.6, in the surface waters was found offshore in the inner and middle shelf. This density was equivalent to the density of the water at >100 m offshore. As a result, this dense water also appeared as a layer of bottom water that extended across the shelf to the shelf edge.

Regional variability among nonlinear chlorophyll-phosphorus relationships in lakes

USGS Publications Warehouse

Filstrup, Christopher T.; Wagner, Tyler; Soranno, Patricia A.; Stanley, Emily H.; Stow, Craig A.; Webster, Katherine E.; Downing, John A.

2014-01-01

The relationship between chlorophyll a (Chl a) and total phosphorus (TP) is a fundamental relationship in lakes that reflects multiple aspects of ecosystem function and is also used in the regulation and management of inland waters. The exact form of this relationship has substantial implications on its meaning and its use. We assembled a spatially extensive data set to examine whether nonlinear models are a better fit for Chl a—TP relationships than traditional log-linear models, whether there were regional differences in the form of the relationships, and, if so, which regional factors were related to these differences. We analyzed a data set from 2105 temperate lakes across 35 ecoregions by fitting and comparing two different nonlinear models and one log-linear model. The two nonlinear models fit the data better than the log-linear model. In addition, the parameters for the best-fitting model varied among regions: the maximum and lower Chl aasymptotes were positively and negatively related to percent regional pasture land use, respectively, and the rate at which chlorophyll increased with TP was negatively related to percent regional wetland cover. Lakes in regions with more pasture fields had higher maximum chlorophyll concentrations at high TP concentrations but lower minimum chlorophyll concentrations at low TP concentrations. Lakes in regions with less wetland cover showed a steeper Chl a—TP relationship than wetland-rich regions. Interpretation of Chl a—TP relationships depends on regional differences, and theory and management based on a monolithic relationship may be inaccurate.

Long-term Trend of Satellite-observed Chlorophyll-a Concentration Variations in the East/Japan Sea

NASA Astrophysics Data System (ADS)

Park, J. E.; PARK, K. A.

2016-02-01

Long-term time-series of satellite ocean color data enable us to analyze the effects of climate change on ocean ecosystem through chlorophyll-a concentration as a proxy for phytoplankton biomass. In this study, we constructed a 17 year-long time-series dataset (1998-2014) of chlorophyll-a concentration by combining SeaWiFS (Obrview-2, 1997-2010) and MODIS (Aqua, 2002-present) data in the East Sea (Japan Sea). Several types of errors such as anonymously high values (a speckle error), stripe-like patterns, discrepancy originating from time gap between the two satellites were eliminated to enhance the accuracy of chlorophyll-a concentration data. The composited chlorophyll-a concentration maps, passing through the post-processing of the speckle errors, were improved significantly, by 14% of abnormal variability in maximum. Using the database, we investigated spatial and temporal variability of chlorophyll-a concentration in the East Sea. Spatial distribution of long-term trend of chlorophyll-a concentration indicated obvious distinction between northern and southern regions of the subpolar front. It revealed predominant seasonal variabilities as well as long-term changes in the timings of spring bloom. This study addresses the important role of local climate change on fast changing ecosystem of the East Sea as one of miniature oceans.

Carbon budget of sea-ice algae in spring: Evidence of a significant transfer to zooplankton grazers

NASA Astrophysics Data System (ADS)

Michel, C.; Legendre, L.; Ingram, R. G.; Gosselin, M.; Levasseur, M.

1996-08-01

The fate of ice-bottom algae, before and after release from the first-year sea ice into the water column, was assessed during the period of ice-algal growth and decline in Resolute Passage (Canadian Arctic). During spring 1992 (from April to June), algae in the bottom ice layer and those suspended and sinking in the upper water column (top 15 m) were sampled approximately every 4 days. Ice-bottom chlorophyll a reached a maximum concentration of 160 mg m-2 in mid-May, after which it decreased to lower values. In the water column, chlorophyll a concentrations were low until the period of ice-algal decline (˜0.1 mg m-3), with most biomass in the <5-μm fraction. In both the suspended and sinking material, large increases of algal biomass occurred at the beginning of June, following the release of ice-algae into the water column. The input of ice-algal derived carbon to the upper water column and the proportions exported through sinking or remaining in suspension were assessed using a carbon budget for the two periods of ice-algal growth and decline. For each period the output terms closely balanced the input. The carbon budget showed that most of the biomass introduced into the upper water column remained suspended (>65% of total export) and that ice-algae were ingested by under-ice grazers after release from the ice. These results stress the importance of ice algae for pelagic consumers during the early stages of ice melt and show that the transfer of ice algae to higher trophic levels extends beyond the period of maximum algal production in the ice bottom.

Transposase-Derived Proteins FHY3/FAR1 Interact with PHYTOCHROME-INTERACTING FACTOR1 to Regulate Chlorophyll Biosynthesis by Modulating HEMB1 during Deetiolation in Arabidopsis[W

PubMed Central

Tang, Weijiang; Wang, Wanqing; Chen, Dongqin; Ji, Qiang; Jing, Yanjun; Wang, Haiyang; Lin, Rongcheng

2012-01-01

Successful chlorophyll biosynthesis during initial light exposure is critical for plant survival and growth, as excess accumulation of chlorophyll precursors in darkness can cause photooxidative damage to cells. Therefore, efficient mechanisms have evolved to precisely regulate chlorophyll biosynthesis in plants. Here, we identify FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED IMPAIRED RESPONSE1 (FAR1), two transposase-derived transcription factors, as positive regulators of chlorophyll biosynthesis in Arabidopsis thaliana. We show that null mutations in FHY3 and FAR1 cause reduced protochlorophyllide (a precursor of chlorophyll) levels in darkness and less photobleaching in the light. We find that FHY3 directly binds to the promoter and activates expression of HEMB1, which encodes 5-aminolevulinic acid dehydratase in the chlorophyll biosynthetic pathway. We reveal that PHYTOCHROME-INTERACTING FACTOR1 physically interacts with the DNA binding domain of FHY3, thereby partly repressing FHY3/FAR1-activated HEMB1 expression. Strikingly, FHY3 expression is upregulated by white light. In addition, our genetic data indicate that overexpression, severe reduction, or lack of HEMB1 impairs plant growth and development. Together, our findings reveal a crucial role of FHY3/FAR1 in regulating chlorophyll biosynthesis, thus uncovering a new layer of regulation by which light promotes plant dark–light transition in early seedling development. PMID:22634759

Regional to Global Assessments of Phytoplankton Dynamics From The SeaWiFS Mission

NASA Technical Reports Server (NTRS)

Siegel, David; Behrenfeld, Michael; Maritorena, Stephanie; McClain, Charles R.; Antoine, David; Bailey, Sean W.; Bontempi, Paula S.; Boss, Emmanuel S.; Dierssen, Heidi M.; Doney, Scott C.;

Algicidal and denitrification characterization of Acinetobacter sp. J25 against Microcystis aeruginosa and microbial community in eutrophic landscape water.

PubMed

Su, Jun Feng; Ma, Min; Wei, Li; Ma, Fang; Lu, Jin Suo; Shao, Si Cheng

2016-06-15

Acinetobacter sp. J25 exhibited good denitrification and high algicidal activity against toxic Microcystis aeruginosa. Response surface methodology (RSM) experiments showed that the maximum algicidal ratio occurred under the following conditions: temperature, 30.46°C; M. aeruginosa density, 960,000cellsmL(-1); and inoculum, 23.75% (v/v). Of these, inoculum produced the maximum effect. In the eutrophic landscape water experiment, 10% bacterial culture was infected with M. aeruginosa cells in the landscape water. After 24days, the removal ratios of nitrate and chlorophyll-a were high, 100% and 87.86%, respectively. The denitrification rate was approximately 0.118mgNO3(-)-N·L(-1)·h(-1). Moreover, the high-throughput sequencing result showed that Acinetobacter sp. J25 was obviously beneficial for chlorophyll-a and nitrate removal performance in the eutrophic landscape water treatment. Therefore, strain J25 is promising for the simultaneous removal of chlorophyll-a and nitrate in the eutrophic landscape water treatment. Copyright © 2016 Elsevier Ltd. All rights reserved.

Novel type of red-shifted chlorophyll a antenna complex from Chromera velia: II. Biochemistry and spectroscopy.

PubMed

Bína, David; Gardian, Zdenko; Herbstová, Miroslava; Kotabová, Eva; Koník, Peter; Litvín, Radek; Prášil, Ondřej; Tichý, Josef; Vácha, František

2014-06-01

A novel chlorophyll a containing pigment-protein complex expressed by cells of Chromera velia adapted to growth under red/far-red illumination [1]. Purification of the complex was achieved by means of anion-exchange chromatography and gel-filtration. The antenna is shown to be an aggregate of ~20kDa proteins of the light-harvesting complex (LHC) family, unstable in the isolated form. The complex possesses an absorption maximum at 705nm at room temperature in addition to the main chlorophyll a maximum at 677nm producing the major emission band at 714nm at room temperature. The far-red absorption is shown to be the property of the isolated aggregate in the intact form and lost upon dissociation. The purified complex was further characterized by circular dichroism spectroscopy and fluorescence spectroscopy. This work thus identified the third different class of antenna complex in C. velia after the recently described FCP-like and LHCr-like antennas. Possible candidates for red antennas are identified in other taxonomic groups, such as eustigmatophytes and the relevance of the present results to other known examples of red-shifted antenna from other organisms is discussed. This work appears to be the first successful isolation of a chlorophyll a-based far-red antenna complex absorbing above 700nm unrelated to LHCI. Copyright © 2014 Elsevier B.V. All rights reserved.

Seasonal dynamics in colored dissolved organic matter in the Mediterranean Sea: Patterns and drivers

NASA Astrophysics Data System (ADS)

Xing, Xiaogang; Claustre, Hervé; Wang, Haili; Poteau, Antoine; D`Ortenzio, Fabrizio

2014-01-01

Two autonomous profiling “Bio-Argo” floats were deployed in the northwestern and eastern sub-basins of the Mediterranean Sea in 2008. They recorded at high vertical (1 m) and temporal (5 day) resolution, the vertical distribution and seasonal variation of colored dissolved organic matter (CDOM), as well as of chlorophyll-a concentration and hydrological variables. The CDOM standing stock presented a clear seasonal dynamics with the progressive summer formation and winter destruction of subsurface CDOM maxima (YSM, for Yellow Substance Maximum). It was argued that subsurface CDOM is a by-product of phytoplankton, based on two main characteristics, (1) the YSM was located at the same depth than the deep chlorophyll maximum (DCM) and (2) the CDOM increased in summer parallels the decline in chlorophyll-a. These observations suggested an indirect but tight coupling between subsurface CDOM and phytoplankton via microbial activity or planktonic foodweb interactions. Moreover, the surface CDOM variations observed both by floats and MODIS displayed different seasonal dynamics from what recorded at subsurface one. This implies that CDOM standing stock can be hardly detected by satellite. It is worthnoting that surface CDOM was found to be more related to the sea surface temperature (SST) than chlorophyll-a concentration, suggesting its physical origin, in contrast to the biological origin of YSM and subsurface standing stocks.

Mining a sea of data: deducing the environmental controls of ocean chlorophyll.

PubMed

Irwin, Andrew J; Finkel, Zoe V

2008-01-01

Chlorophyll biomass in the surface ocean is regulated by a complex interaction of physiological, oceanographic, and ecological factors and in turn regulates the rates of primary production and export of organic carbon to the deep ocean. Mechanistic models of phytoplankton responses to climate change require the parameterization of many processes of which we have limited knowledge. We develop a statistical approach to estimate the response of remote-sensed ocean chlorophyll to a variety of physical and chemical variables. Irradiance over the mixed layer depth, surface nitrate, sea-surface temperature, and latitude and longitude together can predict 83% of the variation in log chlorophyll in the North Atlantic. Light and nitrate regulate biomass through an empirically determined minimum function explaining nearly 50% of the variation in log chlorophyll by themselves and confirming that either light or macronutrients are often limiting and that much of the variation in chlorophyll concentration is determined by bottom-up mechanisms. Assuming the dynamics of the future ocean are governed by the same processes at work today, we should be able to apply these response functions to future climate change scenarios, with changes in temperature, nutrient distributions, irradiance, and ocean physics.

Primary production and microbial activity in the euphotic zone of Lake Baikal (Southern Basin) during late winter

NASA Astrophysics Data System (ADS)

Straškrábová, V.; Izmest'yeva, L. R.; Maksimova, E. A.; Fietz, S.; Nedoma, J.; Borovec, J.; Kobanova, G. I.; Shchetinina, E. V.; Pislegina, E. V.

2005-04-01

Three years of regular weekly/biweekly monitoring of seasonal changes in temperature, transparency, chlorophyll a (CHL) and bacteria [erythrosine-stained microscopic counts and cultivable colony forming units (CFUs)] at the vertical profile in the South basin of Lake Baikal (51°54'195″N, 105°04'235″E, depth 800 m) were evaluated. In more detail, the structure and function of phytoplankton and the microbial loop in the euphotic layer at the same site were investigated during the late-winter-early-spring period under the ice. The depth of euphotic zone (up to 1% of surface irradiation) was 35 to 40 m. Primary production was measured three times a week with the 14C method in 2, 10, 20, 30 and 40 m. Maximum production was found in 10 m, with lower values towards the surface (light inhibition) and towards the lower layers. The total production in cells larger than 1 μm in the column (0-40 m) was 204-240 mg C d -1 m -2, 30-40% of it being in cells 1-3 μm (mostly picocyanobacteria), which represented roughly 9% of the total chlorophyll a (estimated from pigment analyses). A major part of phytoplankton biomass was formed by diatoms ( Synedra acus Hust., Asterionella formosa Hass. and Stephanodiscus meyerii Genkal & Popovskaya). Total production (including extracellular, dissolved organic matter) was 235-387 mg C day -1 m -2, and the exudates were readily used by bacteria (particles 0.2-1 μm). This part amounted to 1-5% of cellular production in 2 to 20 m and 11-77% of cellular production in 20-40 m, i.e., in light-limited layers. From 0 to 30 m, chlorophyll a concentration was 0.8 to 1.3 μg l -1, wherefrom it decreased rapidly to 0.1 μg l -1 towards the depth of 40 m. Bacteria (DAPI-stained microscopic counts) reached 0.5-1.4×10 6 ml -1; their cell volumes measured via image analysis were small (average 0.05 μm -3), often not well countable when erythrosine stain was used. Bacterial biomasses were in the range of 6-21 μg C l -1. Numbers of colony forming units (CFUs) on nutrient fish-agar were c. 3-4 orders lower than DAPI counts. The amounts of heterotrophic protists were low, whereby flagellates reached 6 to 87 ml -1 and ciliates, 0.2-1.2 ml -1 (mostly Oligotrichida). Bacterial production was measured in the same depths as primary production using 3H-thymidine (Thy) and 14C-leucine (Leu) uptake. Consistently, bacterial abundances, biomasses, thymidine and leucine production were higher by 30-50% in layers 2, 10 and 20 m compared with that in the deeper 30 and 40 m, where cellular primary production was negligible. Leucine uptake in the deeper layers was even three times lower than in the upper ones. From the comparison of primary and bacterial production, bacteria roughly use 20-40% of primary production during 24 h in the layers 2 to 20 m.

Genetically engineered mutant of the cyanobacterium Synechocystis 6803 lacks the photosystem II chlorophyll-binding protein CP-47

PubMed Central

Vermaas, Wim F. J.; Williams, John G. K.; Rutherford, A. William; Mathis, Paul; Arntzen, Charles J.

1986-01-01

CP-47 is absent in a genetically engineered mutant of cyanobacterium Synechocystis 6803, in which the psbB gene [encoding the chlorophyll-binding photosystem II (PSII) protein CP-47] was interrupted. Another chlorophyll-binding PSII protein, CP-43, is present in the mutant, and functionally inactive PSII-enriched particles can be isolated from mutant thylakoids. We interpret these data as indicating that the PSII core complex of the mutant still assembles in the absence of CP-47. The mutant lacks a 77 K fluorescence emission maximum at 695 nm, suggesting that the PSII reaction center is not functional. The absence of primary photochemistry was indicated by EPR and optical measurements: no chlorophyll triplet originating from charge recombination between P680+ and Pheo- was observed in the mutant, and there were no flash-induced absorption changes at 820 nm attributable to chlorophyll P680 oxidation. These observations lead us to conclude that CP-47 plays an essential role in the activity of the PSII reaction center. Images PMID:16593788

Relationship between the Fluorescence Lifetime of Chlorophyll 'a' and Primary Productivity within the Mississippi River Plume and Adjacent Shelf Region

NASA Technical Reports Server (NTRS)

Hall, Callie; Miller, Richard L.; Fernandez, Salvador M.; McKee, Brent A.

2000-01-01

In situ measurements of chlorophyll fluorescence intensity have been widely used to estimate phytoplankton biomass. However, because the fluorescence quantum yield of chlorophyll a in vivo can be highly variable, measurements of chlorophyll fluorescence intensity cannot be directly correlated with phytoplankton biomass and do not provide information on the physiological state of the phytoplankton under study. Conversely, lifetime-based measurements of chlorophyll fluorescence provide a framework in which photosynthetic rates of phytoplankton can be analyzed according to phytoplankton physiology. Along with the measurement of primary production and ambient nutrient concentrations within the Mississippi River plume in the northern Gulf of Mexico, phytoplankton fluorescence lifetimes were measured using a Fluorescence Lifetime Phytoplankton Analyzer (developed under a NASA Small Business Innovative Research contract to Ciencia, Inc.). Variability of fluorescence lifetimes within the plume can be used as a background from which to interpret variations in the maximum quantum yield of photochemistry. The extent to which nutrient and effluent loading in this dynamic coastal area affect the photosynthetic performance of phytoplankton will be presented as a function of phytoplankton fluorescence lifetimes.

Leaf Surface Effects on Retrieving Chlorophyll Content from Hyperspectral Remote Sensing

NASA Astrophysics Data System (ADS)

Qiu, Feng; Chen, JingMing; Ju, Weimin; Wang, Jun; Zhang, Qian

2017-04-01

Light reflected directly from the leaf surface without entering the surface layer is not influenced by leaf internal biochemical content. Leaf surface reflectance varies from leaf to leaf due to differences in the surface roughness features and is relatively more important in strong absorption spectral regions. Therefore it introduces dispersion of data points in the relationship between biochemical concentration and reflectance (especially in the visible region). Separation of surface from total leaf reflection is important to improve the link between leaf pigments content and remote sensing data. This study aims to estimate leaf surface reflectance from hyperspectral remote sensing data and retrieve chlorophyll content by inverting a modified PROSPECT model. Considering leaf surface reflectance is almost the same in the visible and near infrared spectral regions, a surface layer with a reflectance independent of wavelength but varying from leaf to leaf was added to the PROSPECT model. The specific absorption coefficients of pigments were recalibrated. Then the modified model was inverted on independent datasets to check the performance of the model in predicting the chlorophyll content. Results show that differences in estimated surface layer reflectance of various species are noticeable. Surface reflectance of leaves with epicuticular waxes and trichomes is usually higher than other samples. Reconstruction of leaf reflectance and transmittance in the 400-1000 nm wavelength region using the modified PROSPECT model is excellent with low root mean square error (RMSE) and bias. Improvements for samples with high surface reflectance (e.g. maize) are significant, especially for high pigment leaves. Moreover, chlorophyll retrieved from inversion of the modified model is consequently improved (RMSE from 5.9-13.3 ug/cm2 with mean value 8.1 ug/cm2, while mean correlation coefficient is 0.90) compared to results of PROSPECT-5 (RMSE from 9.6-20.2 ug/cm2 with mean value 13.1 ug/cm2, while mean correlation coefficient is 0.81). Underestimation of high chlorophyll content, which is due to underestimation of reflectance in the visible region of PROSPECT, is partially corrected or alleviated. Improvements are particularly noticeable for leaves with high surface reflectance or high chlorophyll content, which both lead to large proportions of surface reflectance to the total leaf reflectance.

Complex vertical migration of larvae of the ghost shrimp, Nihonotrypaea harmandi, in inner shelf waters of western Kyushu, Japan

NASA Astrophysics Data System (ADS)

Tamaki, Akio; Mandal, Sumit; Agata, Yoshihiro; Aoki, Ikumi; Suzuki, Toshikazu; Kanehara, Hisao; Aoshima, Takashi; Fukuda, Yasushi; Tsukamoto, Hideshi; Yanagi, Tetsuo

2010-01-01

The position of meroplanktonic larvae in the water column with depth-dependent current velocities determines horizontal transport trajectories. For those larvae occurring in inner shelf waters, little is known about how combined diel and tidally-synchronized vertical migration patterns shift ontogenetically. The vertical migration of larvae of Nihonotrypaea harmandi (Decapoda: Thalassinidea: Callianassidae) was investigated in mesotidal, inner shelf waters of western Kyushu, Japan in July-August 2006. The larval sampling at seven depth layers down to 60 m was conducted every 3 h for 36 h in a 68.5-m deep area 10 km off a major coastal adult habitat. Within a 61-65-m deep area 5-7.5 km off the adult habitat, water temperature, salinity, chlorophyll a concentration, and photon flux density were measured, and water currents there were characterized from harmonic analysis of current meter data collected in 2008. The water column was stratified, with pycnocline, chlorophyll a concentration maximum, and 2% of photon flux density at 2 m, recorded at around 22-24 m. The stratified residual currents were detected in their north component, directed offshore and onshore in the upper and lower mixed layers, respectively. More than 87% of larvae occurred between 20 m and 60 m, producing a net onshore transport of approximately 1.3 km d -1. At the sunset flooding tide, all zoeal-stage larvae ascended, which could further promote retention (1.4-km potential onshore transport in 3 h). The actual onshore transport of larvae was detected by observing their occurrence pattern in a shallow embayment area with the adult habitat for 24 h in October 1994. However, ontogenetic differences in the vertical migration pattern in inner shelf waters were also apparent, with the maximum mean positions of zoeae deepening with increasing stages. Zoeae I and II performed a reverse diel migration, with their minimum and maximum depths being reached around noon and midnight, respectively. Zoeae IV and V descended continuously. Zoeae III had behaviors that were intermediate to those of the earlier- and later-stage zoeae. Postlarvae underwent a normal diel migration (nocturnal ascent) regardless of tides, with the deepest position (below 60 m and/or on the bottom) during the day. These findings give a new perspective towards how complex vertical migration patterns in meroplanktonic larvae enable their retention in inner shelf waters before the final entry of postlarvae into their natal populations.

[Effects of different water potentials on leaf gas exchange and chlorophyll fluorescence parameters of cucumber during post-flowering growth stage].

PubMed

Lin, Lu; Tang, Yun; Zhang, Ji-tao; Yan, Wan-li; Xiao, Jian-hong; Ding, Chao; Dong, Chuan; Ji, Zeng-shun

2015-07-01

Impacts of different substrate water potentials (SWP) on leaf gas exchange and chlorophyll fluorescence parameters of greenhouse cucumber during its post-flowering growth stage were analyzed in this study. The results demonstrated that -10 and -30 kPa were the critical values for initiating stomatal and non-stomatal limitation of drought stress, respectively. During the stage of no drought stress (-10 kPa < SWP ≤ 0 kPa), gas exchange parameters and chlorophyll fluorescence parameters were not different significantly among treatments. During the stage of stomatal limitation of drought stress (-30 kPa

Cryptic oxygen cycling in anoxic marine zones

PubMed Central

Padilla, Cory C.; Stewart, Frank J.; Ulloa, Osvaldo; Paulmier, Aurélien; Gregori, Gerald; Revsbech, Niels Peter

2017-01-01

Oxygen availability drives changes in microbial diversity and biogeochemical cycling between the aerobic surface layer and the anaerobic core in nitrite-rich anoxic marine zones (AMZs), which constitute huge oxygen-depleted regions in the tropical oceans. The current paradigm is that primary production and nitrification within the oxic surface layer fuel anaerobic processes in the anoxic core of AMZs, where 30–50% of global marine nitrogen loss takes place. Here we demonstrate that oxygenic photosynthesis in the secondary chlorophyll maximum (SCM) releases significant amounts of O2 to the otherwise anoxic environment. The SCM, commonly found within AMZs, was dominated by the picocyanobacteria Prochlorococcus spp. Free O2 levels in this layer were, however, undetectable by conventional techniques, reflecting a tight coupling between O2 production and consumption by aerobic processes under apparent anoxic conditions. Transcriptomic analysis of the microbial community in the seemingly anoxic SCM revealed the enhanced expression of genes for aerobic processes, such as nitrite oxidation. The rates of gross O2 production and carbon fixation in the SCM were found to be similar to those reported for nitrite oxidation, as well as for anaerobic dissimilatory nitrate reduction and sulfate reduction, suggesting a significant effect of local oxygenic photosynthesis on Pacific AMZ biogeochemical cycling. PMID:28716941

Beneficial role of spermidine in chlorophyll metabolism and D1 protein content in tomato seedlings under salinity-alkalinity stress.

PubMed

Hu, Lipan; Xiang, Lixia; Li, Shuting; Zou, Zhirong; Hu, Xiao-Hui

2016-04-01

Polyamines are important in protecting plants against various environmental stresses, including protection against photodamage to the photosynthetic apparatus. The molecular mechanism of this latter effect is not completely understood. Here, we have investigated the effects of salinity-alkalinity stress and spermidine (Spd) on tomato seedlings at both physiological and transcriptional levels. Salinity-alkalinity stress decreased leaf area, net photosynthetic rate, maximum net photosynthetic rate, light saturation point, apparent quantum efficiency, total chlorophyll, chlorophyll a and chlorophyll a:chlorophyll b relative to the control. The amount of D1 protein, an important component of photosystem II, was reduced compared with the control, as was the expression of psbA, which codes for D1. Expression of the chlorophyll biosynthesis gene porphobilinogen deaminase (PBGD) was reduced following salinity-alkalinity stress, whereas the expression of Chlase, which codes for chlorophyllase, was increased. These negative physiological effects of salinity-alkalinity stress were alleviated by exogenous Spd. Expression of PBGD and psbA were enhanced, whereas the expression of Chlase was reduced, when exogenous Spd was included in the stress treatment compared with when it was not. The protective effect of Spd on chlorophyll and D1 protein content during stress may maintain the photosynthetic apparatus, permitting continued photosynthesis and growth of tomato seedlings (Solanum lycopersicum cv. Jinpengchaoguan) under salinity-alkalinity stress. © 2015 Scandinavian Plant Physiology Society.

Tracking upwind areas associated with enhanced chlorophyll-a concentrations to examine the impact of atmospheric deposition on phytoplankton production in the Sargasso and Mediterranean Seas

NASA Astrophysics Data System (ADS)

Kim, T. W.

2016-12-01

Transports of terrestrial materials through the atmosphere and their depositions influence ocean biogeochemistry. In particular, growth of phytoplankton in oligotrophic oceans may be stimulated by the atmospheric deposition of nutrients (e.g. reactive nitrogen species and iron). The Sargasso and Mediterranean Seas are two oligotrophic oceans that may show the enhancements in phytoplankton production by the atmospheric deposition, because their upwind areas include African deserts and urban areas of the United States and the Europe. To test this hypothesis, time series of chlorophyll-a concentration (from the Moderate Resolution Imaging Spectroradiometer) were combined with air mass back trajectory (from Hybrid Single Particle Lagrangian Integrated Trajectory Model) to perform the Concentration-Weighted Trajectory (CWT) receptor model. In this model, all individual endpoints of a single air mass back trajectory are associated with a chlorophyll-a concentration measured at the starting time of air mass back trajectory. The upwind areas showing relatively high CWT values represent they are mostly associated with enhanced chlorophyll-a concentration and contribute to phytoplankton production. We carried out the CWT in 65 and 188 stations for the Mediterranean and Saragossa Seas, respectively. The results showed relatively high CWT values in the North American and northern African continents. However, wind usually flows from these continents to ocean during cold months when chlorophyll-a concentrations are generally high. Thus the results appeared to largely originate from seasonal cycle of ocean mixed layer depth. To minimize the effect of seasonal variations, we divided chlorophyll-a concentrations by monthly climatology, which resulted in much reduced contrast in the CWT values between land and ocean areas. However, some upwind areas including the northern African desert regions still showed relatively high CWT values, maybe implying deposition-induced stimulation of phytoplankton production. We also performed CWT receptor model using sea surface temperature instead of chlorophyll-a concentration to see the effect of ocean mixed layer depth. These results will be included in the presentation.

Saharan Dust Deposition May Affect Phytoplankton Growth in the Mediterranean Sea at Ecological Time Scales

PubMed Central

Gallisai, Rachele; Peters, Francesc; Volpe, Gianluca; Basart, Sara; Baldasano, José Maria

2014-01-01

The surface waters of the Mediterranean Sea are extremely poor in the nutrients necessary for plankton growth. At the same time, the Mediterranean Sea borders with the largest and most active desert areas in the world and the atmosphere over the basin is subject to frequent injections of mineral dust particles. We describe statistical correlations between dust deposition over the Mediterranean Sea and surface chlorophyll concentrations at ecological time scales. Aerosol deposition of Saharan origin may explain 1 to 10% (average 5%) of seasonally detrended chlorophyll variability in the low nutrient-low chlorophyll Mediterranean. Most of the statistically significant correlations are positive with main effects in spring over the Eastern and Central Mediterranean, conforming to a view of dust events fueling needed nutrients to the planktonic community. Some areas show negative effects of dust deposition on chlorophyll, coinciding with regions under a large influence of aerosols from European origin. The influence of dust deposition on chlorophyll dynamics may become larger in future scenarios of increased aridity and shallowing of the mixed layer. PMID:25333783

Chlorophyll a reconstruction from in situ measurements: 2. Marked carbon uptake decrease in the last century

NASA Astrophysics Data System (ADS)

Fründt, B.; Dippner, J. W.; Schulz-Bull, D. E.; Waniek, J. J.

2015-02-01

A chlorophyll a hindcast in the Madeira Basin from 1871 to 2008 was used to analyze the long-term variability in the oligotrophic, subtropical gyres in relation to the climate change of the last century. The deep chlorophyll maximum (DCM), as dominant pattern of the chlorophyll a field, showed a fast decrease in its strength in the 1940s. An absolute minimum was reached between 1967 and 1973 when no DCM established with a recovering to the end of the time series. Long-term variability of the DCM was related to the North Atlantic Oscillation with a time delay of 9 years. The marked decrease in the 1940s was correlated to the drop of the solar radiation in transition from early brightening to global dimming. Caused by the influence of the solar radiation and maybe related to increasing global temperatures in the last century, the integrated chlorophyll a concentration decreased by about 0.7 mg m-2 in 2008 compared to 1871. The high-resolved chlorophyll a hindcast allowed an estimation of the carbon uptake by the ocean due to primary production in the euphotic zone. A rough calculation over the area of the global subtropical oceans showed 700 megaton less carbon uptake in 2008.

Potential Impact of North Atlantic Climate Variability on Ocean Biogeochemical Processes

NASA Astrophysics Data System (ADS)

Liu, Y.; Muhling, B.; Lee, S. K.; Muller-Karger, F. E.; Enfield, D. B.; Lamkin, J. T.; Roffer, M. A.

2016-02-01

Previous studies have shown that upper ocean circulations largely determine primary production in the euphotic layers, here the global ocean model with biogeochemistry (GFDL's Modular Ocean Model with TOPAZ biogeochemistry) forced with the ERA-Interim is used to simulate the natural variability of biogeochemical processes in global ocean during 1979-present. Preliminary results show that the surface chlorophyll is overall underestimated in MOM-TOPAZ, but its spatial pattern is fairly realistic. Relatively high chlorophyll variability is shown in the subpolar North Atlantic, northeastern tropical Atlantic, and equatorial Atlantic. Further analysis suggests that the chlorophyll variability in the North Atlantic Ocean is affected by long-term climate variability. For the subpolar North Atlantic region, the chlorophyll variability is light-limited and is significantly correlated with North Atlantic Oscillation. A dipole pattern of chlorophyll variability is found between the northeastern tropical Atlantic and equatorial Atlantic. For the northeastern North Atlantic, the chlorophyll variability is significantly correlated with Atlantic Meridional Mode (AMM) and Atlantic Multidecadal Oscillation (AMO). During the negative phase of AMM and AMO, the increased trade wind in the northeast North Atlantic can lead to increased upwelling of nutrients. In the equatorial Atlantic region, the chlorophyll variability is largely link to Atlantic-Niño and associated equatorial upwelling of nutrients. The potential impact of climate variability on the distribution of pelagic fishes (i.e. yellowfin tuna) are discussed.

Microplankton trace element contents: implications for mineral limitation of mesozooplankton in an HNLC area

PubMed Central

Baines, Stephen B.; Chen, Xi; Vogt, Stefan; Fisher, Nicholas S.; Twining, Benjamin S.; Landry, Michael R.

2016-01-01

Mesozooplankton production in high-nutrient low-chlorophyll regions of the ocean may be reduced if the trace element concentrations in their food are insufficient to meet growth and metabolic demands. We used elemental microanalysis (SXRF) of single-celled plankton to determine their trace metal contents during a series of semi-Lagrangian drift studies in an HNLC upwelling region, the Costa Rica Dome (CRD). Cells from the surface mixed layer had lower Fe:S but higher Zn:S and Ni:S than those from the subsurface chlorophyll maximum at 22–30 m. Diatom Fe:S values were typically 3-fold higher than those in flagellated cells. The ratios of Zn:C in flagellates and diatoms were generally similar to each other, and to co-occurring mesozooplankton. Estimated Fe:C ratios in flagellates were lower than those in co-occurring mesozooplankton, sometimes by more than 3-fold. In contrast, Fe:C in diatoms was typically similar to that in zooplankton. RNA:DNA ratios in the CRD were low compared with other regions, and were related to total autotrophic biomass and weakly to the discrepancy between Zn:C in flagellated cells and mesozooplankton tissues. Mesozooplankton may have been affected by the trace element content of their food, even though trace metal limitation of phytoplankton was modest at best. PMID:27275029

Evidence for anoxygenic photosynthesis from the distribution of bacteriochlorophylls in the Black Sea.

PubMed

Repeta, D J; Simpson, D J; Jorgensen, B B; Jannasch, H W

1989-11-02

The contribution of anoxygenic photosynthesis to carbon cycling in the Black Sea, the world's largest body of anoxic marine water, has been vigorously investigated and debated for over four decades. Penetration of light into the sulphide-containing deep water may result in a zone of anaerobic primary production by photosynthetic bacteria. We report here the results of analyses of photosynthetic pigments in samples of suspended particulate matter collected from two stations in the western basin of the Black Sea. Our data demonstrate high concentrations of a bacterio-chlorophyll at the chemocline, and thus the potential for anoxygenic photosynthesis as a component of primary production in the carbon cycle of the Black Sea. More than 95% of the pigments in the bacteriochlorophyll-maximum are accounted for by a series of aromatic carotenoids and bacteriochlorophylls-e, including a previously unreported geranyl ester of 4-i-butyl bacteriochlorophyll-e. The distribution of pigments is characteristic of the obligate phototrophs Chlorobium phaeobacteroides and C. phaeovibriodes. Total depth-integrated bacteriochlorophyll at one station exceeded total chlorophyll-a in the overlying oxygenated portion of the euphotic zone. We suggest that anoxygenic photosynthesis is a relatively recent phenomenon in the Black Sea initiated by shallowing of the chemocline over the past decade and development of an anoxic layer devoid of O2 and H2S.

Quantification of Plant Chlorophyll Content Using Google Glass

PubMed Central

Cortazar, Bingen; Koydemir, Hatice Ceylan; Tseng, Derek; Feng, Steve; Ozcan, Aydogan

2015-01-01

Measuring plant chlorophyll concentration is a well-known and commonly used method in agriculture and environmental applications for monitoring plant health, which also correlates with many other plant parameters including, e.g., carotenoids, nitrogen, maximum green fluorescence, etc. Direct chlorophyll measurement using chemical extraction is destructive, complex and time-consuming, which has led to the development of mobile optical readers, providing non-destructive but at the same time relatively expensive tools for evaluation of plant chlorophyll levels. Here we demonstrate accurate measurement of chlorophyll concentration in plant leaves using Google Glass and a custom-developed software application together with a cost-effective leaf holder and multi-spectral illuminator device. Two images, taken using Google Glass, of a leaf placed in our portable illuminator device under red and white (i.e., broadband) light-emitting-diode (LED) illumination are uploaded to our servers for remote digital processing and chlorophyll quantification, with results returned to the user in less than 10 seconds. Intensity measurements extracted from the uploaded images are mapped against gold-standard colorimetric measurements made through a commercially available reader to generate calibration curves for plant leaf chlorophyll concentration. Using five plant species to calibrate our system, we demonstrate that our approach can accurately and rapidly estimate chlorophyll concentration of fifteen different plant species under both indoor and outdoor lighting conditions. This Google Glass based chlorophyll measurement platform can display the results in spatiotemporal and tabular forms and would be highly useful for monitoring of plant health in environmental and agriculture related applications, including e.g., urban plant monitoring, indirect measurements of the effects of climate change, and as an early indicator for water, soil, and air quality degradation. PMID:25669673

Quantification of plant chlorophyll content using Google Glass.

PubMed

Cortazar, Bingen; Koydemir, Hatice Ceylan; Tseng, Derek; Feng, Steve; Ozcan, Aydogan

2015-04-07

Measuring plant chlorophyll concentration is a well-known and commonly used method in agriculture and environmental applications for monitoring plant health, which also correlates with many other plant parameters including, e.g., carotenoids, nitrogen, maximum green fluorescence, etc. Direct chlorophyll measurement using chemical extraction is destructive, complex and time-consuming, which has led to the development of mobile optical readers, providing non-destructive but at the same time relatively expensive tools for evaluation of plant chlorophyll levels. Here we demonstrate accurate measurement of chlorophyll concentration in plant leaves using Google Glass and a custom-developed software application together with a cost-effective leaf holder and multi-spectral illuminator device. Two images, taken using Google Glass, of a leaf placed in our portable illuminator device under red and white (i.e., broadband) light-emitting-diode (LED) illumination are uploaded to our servers for remote digital processing and chlorophyll quantification, with results returned to the user in less than 10 seconds. Intensity measurements extracted from the uploaded images are mapped against gold-standard colorimetric measurements made through a commercially available reader to generate calibration curves for plant leaf chlorophyll concentration. Using five plant species to calibrate our system, we demonstrate that our approach can accurately and rapidly estimate chlorophyll concentration of fifteen different plant species under both indoor and outdoor lighting conditions. This Google Glass based chlorophyll measurement platform can display the results in spatiotemporal and tabular forms and would be highly useful for monitoring of plant health in environmental and agriculture related applications, including e.g., urban plant monitoring, indirect measurements of the effects of climate change, and as an early indicator for water, soil, and air quality degradation.

Late Quaternary palaeoenvironmental reconstruction of sediment drift accumulation in the Malta Graben (central Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Ferraro, Serena; Sulli, Attilio; Di Stefano, Enrico; Giaramita, Luigi; Incarbona, Alessandro; Graham Mortyn, P.; Sprovieri, Mario; Sprovieri, Rodolfo; Tonielli, Renato; Vallefuoco, Mattia; Zizzo, Elisabetta; Tranchida, Giorgio

2018-06-01

The Malta Graben is a deep tectonic depression in the Sicily Channel, bounded by NW-SE normal faults and filled by thick Pliocene-Quaternary deposits. A previous analysis of a giant piston core (LC09) from the Malta Graben had revealed a wide range of sedimentary features (carbonate turbidites, bioturbated mud and scours), although the chronostratigraphic constraint of the stacking pattern has remained elusive. After establishing a reliable chronological framework based on seven radiocarbon dates for a shorter core from the Malta Graben (ANSIC03-735), a down-core analysis of planktonic foraminifer and coccolith abundance, stable isotopes and sediment grain size was carried out. Since the last glacial maximum, palaeoenvironmental conditions (surface fertility and deep chlorophyll maximum during the last glacial and the Younger Dryas; warm and oligotrophic water masses, with a deep nutricline and intense winter mixing during the Holocene) as well as selected calcareous plankton taxa trends and peaks seem to be similar to those reported for other central and western Mediterranean sites, possibly in spite of a unique response of these areas to late Quaternary climatic fluctuations. Four distinct layers, each tens of centimetres thick, are barren of foraminifers but not of coccoliths. Morphobathymetric data as well as new high-resolution and high-penetration seismic profiles show that prolonged contouritic activity has persisted on the western side of the Malta Graben. It is thus likely that layers barren of foraminifers are due to the overflow of fine-grained (clayey) material beyond drift channel dikes.

Late Quaternary palaeoenvironmental reconstruction of sediment drift accumulation in the Malta Graben (central Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Ferraro, Serena; Sulli, Attilio; Di Stefano, Enrico; Giaramita, Luigi; Incarbona, Alessandro; Graham Mortyn, P.; Sprovieri, Mario; Sprovieri, Rodolfo; Tonielli, Renato; Vallefuoco, Mattia; Zizzo, Elisabetta; Tranchida, Giorgio

2018-03-01

The Malta Graben is a deep tectonic depression in the Sicily Channel, bounded by NW-SE normal faults and filled by thick Pliocene-Quaternary deposits. A previous analysis of a giant piston core (LC09) from the Malta Graben had revealed a wide range of sedimentary features (carbonate turbidites, bioturbated mud and scours), although the chronostratigraphic constraint of the stacking pattern has remained elusive. After establishing a reliable chronological framework based on seven radiocarbon dates for a shorter core from the Malta Graben (ANSIC03-735), a down-core analysis of planktonic foraminifer and coccolith abundance, stable isotopes and sediment grain size was carried out. Since the last glacial maximum, palaeoenvironmental conditions (surface fertility and deep chlorophyll maximum during the last glacial and the Younger Dryas; warm and oligotrophic water masses, with a deep nutricline and intense winter mixing during the Holocene) as well as selected calcareous plankton taxa trends and peaks seem to be similar to those reported for other central and western Mediterranean sites, possibly in spite of a unique response of these areas to late Quaternary climatic fluctuations. Four distinct layers, each tens of centimetres thick, are barren of foraminifers but not of coccoliths. Morphobathymetric data as well as new high-resolution and high-penetration seismic profiles show that prolonged contouritic activity has persisted on the western side of the Malta Graben. It is thus likely that layers barren of foraminifers are due to the overflow of fine-grained (clayey) material beyond drift channel dikes.

A set of optical methods for studying marine phytoplankton

NASA Astrophysics Data System (ADS)

Konyukhov, I. V.; Glukhovets, D. I.

2017-05-01

The results of integrated optical measurements of Black Sea water samples using a spectrophotometer, laser spectrometer, and fluorometer with pulse-modulated excitation light are discussed. A linear correlation between the intensities of chlorophyll absorption at 673 nm and chlorophyll fluorescence (680-750 nm) is observed. Phycoerythrin-containing organisms are recorded in phytoplankton in layers below 20 m. The data of 1-week monitoring of phytoplankton abundance and functional activity in Golubaya Bay with a Mega-25 flow fluorometer are described.

Exploring the Relationship Between Reflectance Red Edge and Chlorophyll Content in Slash Pine

NASA Technical Reports Server (NTRS)

Curran, Paul J.; Dungan, Jennifer L.; Gholz, Henry L.

1990-01-01

Chlorophyll is a key indicator of the physiological status of a forest canopy. However, its distribution may vary greatly in time and space, so that the estimation of chlorophyll content of canopies or branches by extrapolation from leaf values obtained by destructive sampling is labor intensive and potentially inaccurate. Chlorophy11 content is related positively to the point of maximum slope in vegetation reflectance spectra which occurs at wavelengths between 690-740 nm and is known as the "red edge." The red edge of needles on individual slash pine (Piniis elliottii Engelm.) branches and in whole forest canopies was measured with a spectroradiometer. Branches were measured on the ground against a spectrally flat reflectance target and canopies were measured from observation towers against a spectrally variable understory and forest floor. There was a linear relationship between red edge and chlorophyll content of branches (R(exp 2) = 0.91). Measurements of the red edge and this relationship were used to estimate the chlorophyll content of other branches with an error that was lower than that associated with the colorimetric (laboratory) method. There was no relationship between the red edge and the chlorophyll content of whole canopies. This can be explained by the overriding influence of the understory and forest floor, an influence that was illustrated by spectral mixture modeling. The results suggest that the red edge could be used to estimate the chlorophyll content in branches but it is unlikely to be of value for the estimation of chlorophyll content in canopies unless the canopy cover is high.

Linking deep convection and phytoplankton blooms in the northern Labrador Sea in a changing climate

DOE Office of Scientific and Technical Information (OSTI.GOV)

Balaguru, Karthik; Doney, Scott C.; Bianucci, Laura

Wintertime convective mixing plays a pivotal role in the sub-polar North Atlantic spring phytoplankton blooms by favoring phytoplankton survival in the competition between light-dependent production and losses due to grazing and gravitational settling. We use satellite and ocean reanalyses to show that the area-averaged maximum winter mixed layer depth is positively correlated with April chlorophyll concentration in the northern Labrador Sea. A simple theoretical framework is developed to understand the relative roles of winter/spring convection and gravitational sedimentation in spring blooms in this region. Combining climate model simulations that project a weakening of wintertime Labrador Sea convection from Arctic seamore » ice melt with our framework suggests a potentially significant reduction in the initial fall phytoplankton population that survive the winter to seed the region's spring bloom by the end of the 21st century.« less

Instrumented elephant seals reveal the seasonality in chlorophyll and light-mixing regime in the iron-fertilized Southern Ocean

NASA Astrophysics Data System (ADS)

Blain, Stéphane; Renaut, Sophie; Xing, Xiaogang; Claustre, Hervé; Guinet, Christophe

2013-12-01

analyze an original large data set of concurrent in situ measurements of fluorescence, temperature and salinity provided by sensors mounted on the elephant seals of Kerguelen Island. Our results were mainly gathered in regions of the Southern Ocean where the typical iron limitation is relieved by natural iron fertilization. Thus the role of light as the proximal factor of control of phytoplankton can be examined. We show that self-shading, and consequently stratification, are major factors controlling the integrated biomass during the bloom induced by iron fertilization. When the mixed layer was the shallowest, the maximum ChlML achievable by the given light-mixing regime was however not reached, most likely due to silicic acid limitation. We also show that a favorable light-mixing regime prevails after the spring equinox and is maintained for roughly seven months (October-April).

Community composition of picoeukaryotes in the South China Sea during winter

NASA Astrophysics Data System (ADS)

Lin, Yun-Chi; Chiang, Kuo-Ping; Kang, Lee-Kuo

2017-07-01

Picoeukaryotes, the smallest protists, are highly diverse and abundant in the ocean. However, little information is available about their community composition in the tropical northwestern Pacific Ocean. This study collected surface and deep chlorophyll maximum (DCM) waters from the South China Sea (SCS) to study the picoeukaryotic composition by constructing clone libraries of the 18S rRNA gene. The libraries were dominated by the heterotrophic organisms, alveolates and Rhizaria, which accounted for 46% and 16% of total clones, respectively. MALV-I was the most abundant group in alveolates, and Rhizaria appears to be a key organism in the SCS, particularly within DCM layers. These results indicate that parasitism is significant in the oligotrophic and tropical SCS. Apart from core-dinoflagellates, chlorophytes, haptophytes, cryptophytes and pelagophytes were other important contributors to primary production in pico-sized fraction based on quantitative and qualitative data.

Linking deep convection and phytoplankton blooms in the northern Labrador Sea in a changing climate

PubMed Central

Doney, Scott C.; Bianucci, Laura; Rasch, Philip J.; Leung, L. Ruby; Yoon, Jin-Ho; Lima, Ivan D.

2018-01-01

Wintertime convective mixing plays a pivotal role in the sub-polar North Atlantic spring phytoplankton blooms by favoring phytoplankton survival in the competition between light-dependent production and losses due to grazing and gravitational settling. We use satellite and ocean reanalyses to show that the area-averaged maximum winter mixed layer depth is positively correlated with April chlorophyll concentration in the northern Labrador Sea. A simple theoretical framework is developed to understand the relative roles of winter/spring convection and gravitational sedimentation in spring blooms in this region. Combining climate model simulations that project a weakening of wintertime Labrador Sea convection from Arctic sea ice melt with our framework suggests a potentially significant reduction in the initial fall phytoplankton population that survive the winter to seed the region’s spring bloom by the end of the 21st century. PMID:29370224

Linking deep convection and phytoplankton blooms in the northern Labrador Sea in a changing climate.

PubMed

Balaguru, Karthik; Doney, Scott C; Bianucci, Laura; Rasch, Philip J; Leung, L Ruby; Yoon, Jin-Ho; Lima, Ivan D

2018-01-01

Wintertime convective mixing plays a pivotal role in the sub-polar North Atlantic spring phytoplankton blooms by favoring phytoplankton survival in the competition between light-dependent production and losses due to grazing and gravitational settling. We use satellite and ocean reanalyses to show that the area-averaged maximum winter mixed layer depth is positively correlated with April chlorophyll concentration in the northern Labrador Sea. A simple theoretical framework is developed to understand the relative roles of winter/spring convection and gravitational sedimentation in spring blooms in this region. Combining climate model simulations that project a weakening of wintertime Labrador Sea convection from Arctic sea ice melt with our framework suggests a potentially significant reduction in the initial fall phytoplankton population that survive the winter to seed the region's spring bloom by the end of the 21st century.

Change in Photosystem II Photochemistry During Algal Growth Phases of Chlorella vulgaris and Scenedesmus obliquus.

PubMed

Oukarroum, Abdallah

2016-06-01

Sensitivity of photosynthetic processes towards environmental stress is used as a bioanalytical tool to evaluate the responses of aquatic plants to a changing environment. In this paper, change of biomass density, chlorophyll a fluorescence and photosynthetic parameters during growth phases of two microalgae Chlorella vulgaris and Scenedesmus obliquus were studied. The photosynthetic growth behaviour changed significantly with cell age and algae species. During the exponential phase of growth, the photosynthesis capacity reached its maximum and decreased in ageing algal culture during stationary phase. In conclusion, the chlorophyll a fluorescence OJIP method and the derived fluorescence parameters would be an accurate method for obtaining information on maximum photosynthetic capacities and monitoring algal cell growth. This will contribute to more understanding, for example, of toxic actions of pollutants in microalgae test.

Water Raman normalization of airborne laser fluorosensor measurements - A computer model study

NASA Technical Reports Server (NTRS)

Poole, L. R.; Esaias, W. E.

1982-01-01

The technique for normalizing airborne lidar measurements of chlorophyll fluoresence by the water Raman scattering signal is investigated for laser-excitation wavelengths of 480 and 532 nm using a semianalytic Monte Carlo methodology (SALMON). The signal-integration depth for chlorophyll fluorescence Z(90,F), is found to be insensitive to excitation wavelength and ranges from a maximum of 4.5 m in clearest waters to less than 1 m at a chlorophyll concentration of 20 microgram/liter. For excitation at 532 nm, the signal-integration depth for Raman scattering, Z(90,R), is comparable to Z(90,F). For excitation at 480 nm, Z(90,R) is four times as large as Z(90,F) in clearest waters but nearly equivalent at chlorophyll concentrations greater than 2-3 microgram/liter. Absolute signal levels are stronger with excitation at 480 nm than with excitation at 532 nm, but this advantage must be weighed against potential ambiguities resulting from different integration depths for the fluorescence and Raman scattering signals in clearer waters. To the precision of the simulations, Raman normalization produces effectively linear response to chlorophyll concentration for both excitation wavelengths.

Phytoplankton community structure in relation to hydrographic features along a coast-to-offshore transect on the SW Atlantic Continental Shelf

NASA Astrophysics Data System (ADS)

Islabão, C. A.; Mendes, C. R. B.; Detoni, A. M. S.; Odebrecht, C.

2017-12-01

The continental shelf in Southern Brazil is characterized by high biological productivity associated with horizontal and vertical density gradients due to the mixing of distinct water masses. Phytoplankton biomass and composition were evaluated in summer 2013 along an on-offshore transect off the mouth of the Patos Lagoon (Lat. 32°12S). Photosynthetic active radiation, temperature, salinity and fluorescence vertical profiles were carried out and Brünt-Väisäla frequency was estimated. Three water bodies were identified: the Subtropical Shelf Water along the entire transect, the Plata Plume Water on the middle shelf surface and the Tropical Water farther offshore. The water was sampled (N = 40) for the analyses of dissolved inorganic nutrients, phytoplankton cell density and composition. Phytoplankton present in the water was identified and quantified by the classical microscope sedimentation technique, complemented with CHEMTAX analysis of high-performance liquid chromatography (HPLC) pigment data. From the results obtained, chlorophyll a concentration was higher at both coastal stations (1.6-2.0 mg m-3) where the water column was homogeneous and diatoms dominated the stations. This group was replaced by dinoflagellates in stratified conditions on the shelf and farther offshore. Along the onshore-offshore gradient, two types of dinoflagellates were found: the peridinin-containing dinoflagellates Prorocentrum and Scrippsiella with a small contribution at the coastal stations, and the fucoxantin-containing small Gymnodiniales cells (< 15 μm) with more than 50% of the total chlorophyll a at the stations on the continental shelf, especially associated with the chlorophyll maximum at the base of the euphotic zone. The positive (negative) relationship between the biomass of dinoflagellates (diatoms) with the Brünt-Väisäla frequency, respectively, support the hypothesis that stratification is the most important environmental factor that determines the biomass of phytoplankton communities and distribution on the shelf and in coastal waters off Southern Brazil in summer. Picoplankton cells (Prochlorococcus and Synechococcus), recorded for the first time in the region under study, were predominant in the nutrient-poor and well-lit surface layers along the transect, indicating the importance of their low sedimentation rates (small size) and photo-adaptive strategies to survive on the upper layers of the water column.

The aquatic optics of Lake Tahoe, California-Nevada

NASA Astrophysics Data System (ADS)

Swift, Theodore John

The causes of visual clarity decline and variability in Lake Tahoe, USA, were investigated within the framework of hydrologic optics theory. Ultra-oligotrophic subalpine (1898 m elevation) Lake Tahoe is among the world's clearest, deepest (499 m) and largest (500 km2), representing a unique environmental and economic resource. University of California Davis has documented a ˜0.3 m y-1 trend of decreasing Secchi depth, with ˜3 m interannual variations. Previous work strongly suggested two seasonal modes due to independent processes: A June minimum is due primarily to tributary sediment discharge during snowmelt. A December minimum is due to the deepening mixed layer bringing up phytoplankton and other particles that form a deep particle maximum (DCM) well below the summer mixed layer and Secchi depth stratum. SEM and elemental analysis confirmed as much as 60 percent of near-surface suspended particles were of terrestrial inorganic origin in summer, with inorganic particles minimal (˜20 percent) in winter. Chromophoric dissolved organic matter (CDOM) light absorption in Tahoe is extremely low, comparable to pelagic marine waters, and plays a minor role in clarity loss in Tahoe. However, CDOM reduces ultraviolet light penetration. Mean absorption is 0.040 +/- 0.003 m-1 at 400 nm with 0.023 +/- 0.004 nm-1 exponential slope. The CDOM appears to be autochthonous (phytoplankton), rather than allocthonous (terrestrial humic substances). Chlorophyll-specific particulate absorption is similar to that found for temperate oceans, implying that ocean color models can be successfully applied to Lake Tahoe. Chlorophyll-specific diffuse attenuation along with increased scattering by sediments has caused an upward shift of the DCM from 60--90 m (early 1970s) to 40--70 m recently. Increased attenuation will reduce benthic relative to pelagic primary production. Since measurements in 1971, the lake's color has shifted slightly from blue towards green, though more seasonal measurements are needed to fully quantify the recent range of variation. A clarity model was developed that predicts Secchi depth and diffuse attenuation from inorganic particle and chlorophyll concentration. While organic particles are generally the numerical majority, inorganic particles cause ˜60% of clarity loss, algal-derived particles contribute ˜25%, with the remainder due to CDOM and pure water absorption.

Frontal dynamics boost primary production in the summer stratified Mediterranean sea

NASA Astrophysics Data System (ADS)

Olita, Antonio; Capet, Arthur; Claret, Mariona; Mahadevan, Amala; Poulain, Pierre Marie; Ribotti, Alberto; Ruiz, Simón; Tintoré, Joaquín; Tovar-Sánchez, Antonio; Pascual, Ananda

2017-06-01

Bio-physical glider measurements from a unique process-oriented experiment in the Eastern Alboran Sea (AlborEx) allowed us to observe the distribution of the deep chlorophyll maximum (DCM) across an intense density front, with a resolution (˜ 400 m) suitable for investigating sub-mesoscale dynamics. This front, at the interface between Atlantic and Mediterranean waters, had a sharp density gradient (Δ ρ ˜ 1 kg/m3 in ˜ 10 km) and showed imprints of (sub-)mesoscale phenomena on tracer distributions. Specifically, the chlorophyll-a concentration within the DCM showed a disrupted pattern along isopycnal surfaces, with patches bearing a relationship to the stratification (buoyancy frequency) at depths between 30 and 60 m. In order to estimate the primary production (PP) rate within the chlorophyll patches observed at the sub-surface, we applied the Morel and Andrè (J Geophys Res 96:685-698 1991) bio-optical model using the photosynthetic active radiation (PAR) from Argo profiles collected simultaneously with glider data. The highest production was located concurrently with domed isopycnals on the fresh side of the front, suggestive that (sub-)mesoscale upwelling is carrying phytoplankton patches from less to more illuminated levels, with a contemporaneous delivering of nutrients. Integrated estimations of PP (1.3 g C m-2d-1) along the glider path are two to four times larger than the estimations obtained from satellite-based algorithms, i.e., derived from the 8-day composite fields extracted over the glider trip path. Despite the differences in spatial and temporal sampling between instruments, the differences in PP estimations are mainly due to the inability of the satellite to measure DCM patches responsible for the high production. The deepest (depth > 60 m) chlorophyll patches are almost unproductive and probably transported passively (subducted) from upper productive layers. Finally, the relationship between primary production and oxygen is also investigated. The logarithm of the primary production in the DCM interior (chlorophyll (Chl) > 0.5 mg/m3) shows a linear negative relationship with the apparent oxygen utilization, confirming that high chlorophyll patches are productive. The slope of this relationship is different for Atlantic, mixed interface waters and Mediterranean waters, suggesting the presence of differences in planktonic communities (whether physiological, population, or community level should be object of further investigation) on the different sides of the front. In addition, the ratio of optical backscatter to Chl is high within the intermediate (mixed) waters, which is suggestive of large phytoplankton cells, and lower within the core of the Atlantic and Mediterranean waters. These observations highlight the relevance of fronts in triggering primary production at DCM level and shaping the characteristic patchiness of the pelagic domain. This gains further relevance considering the inadequacy of optical satellite sensors to observe DCM concentrations at such fine scales.

Preliminary study of internal wave effects to chlorophyll distribution in the Lombok Strait and adjacent areas

NASA Astrophysics Data System (ADS)

Arvelyna, Yessy; Oshima, Masaki

2005-01-01

This paper studies the effect of internal wave in the Lombok Strait to chlorophyll distribution in the surrounded areas using ERS SAR, ASTER, SeaWiFS and AVHRR-NOAA images data during 1996-2004 periods. The observation results shows that the internal waves were propagated to the south and the north of strait and mostly occurred during transitional season from dry to wet and wet season (rainy season) between September to December when the layers are strongly stratified. Wavelet transform of image using Meyer wavelet analysis is applied for internal wave detection in ERS SAR and ASTER images, for symmetric extension of data at the image boundaries, to prevent discontinuities by a periodic wrapping of data in fast algorithm and space-saving code. Internal wave created elongated pattern in detail and approximation of image from level 2 to 5 and retained value between 2-4.59 times compared to sea surface, provided accuracy in classification over than 80%. In segmentation process, the Canny edge detector is applied on the approximation image at level two to derive internal wave signature in image. The proposed method can extract the internal wave signature, maintain the continuity of crest line while reduce small strikes from noise. The segmentation result, i.e. the length between crest and trough, is used to compute the internal wave induced current using Korteweg-de Vries (KdV) equation. On ERS SAR data contains surface signature of internal wave (2001/8/20), we calculated that internal wave propagation speed was 1.2 m/s and internal wave induced current was 0.56 m/s, respectively. From the observation of ERS SAR and SeaWiFS images data, we found out that the distribution of maximum chlorophyll area at southern coastline off Bali Island when strong internal wave induced current occurred in south of the Lombok Strait was distributed further to westward, i.e. from 9.25°-10.25°LS, 115°-116.25°SE to 8.8°-10.7°LS, 114.5°-116°SE, and surface chlorophyll concentration near coastal area, i.e. area 8.8°-9.25° LS, 114.5°-115°SE, increased. The preliminary result of this study concludes that the internal waves presumably affect chlorophyll distribution to westward (from 9.25°-10.25°LS, 115°-116.25°SE to 8.8°-10.7°LS, 114.5°-116°SE) in the south coast off Bali Island and increase surface chlorophyll concentration near coastal area (8.8°-9.25° LS, 114.5°-115°SE).

A long-term monitoring study of chlorophyll, microbial contaminants, and pesticides in a coastal residential stormwater pond and its adjacent tidal creek.

PubMed

DeLorenzo, Marie E; Thompson, Brian; Cooper, Emily; Moore, Janet; Fulton, Michael H

2012-01-01

Stormwater ponds are commonly used in residential and commercial areas to control flooding. The accumulation of urban contaminants in stormwater ponds can lead to water-quality problems including nutrient enrichment, chemical contamination, and bacterial contamination. This study presents 5 years of monitoring data assessing water quality of a residential subdivision pond and adjacent tidal creek in coastal South Carolina, USA. The stormwater pond is eutrophic, as described by elevated concentrations of chlorophyll and phosphorus, and experiences periodic cyanobacterial blooms. A maximum monthly average chlorophyll concentration of 318.75 μg/L was measured in the stormwater pond and 227.63 μg/L in the tidal creek. Fecal coliform bacteria (FCB) levels were measured in both the pond and the tidal creek that exceeded health and safety standards for safe recreational use. A maximum monthly average FCB level of 1,247 CFU/100 mL was measured in the stormwater pond and 12,850 CFU/100 mL in the tidal creek. In addition, the presence of antibiotic resistant bacteria and pathogenic bacteria were detected. Low concentrations of herbicides (atrazine and 2,4-D: ), a fungicide (chlorothalonil), and insecticides (pyrethroids and imidacloprid) were measured. Seasonal trends were identified, with the winter months having the lowest concentrations of chlorophyll and FCB. Statistical differences between the stormwater pond and the tidal creek were also noted within seasons. The tidal creek had higher FCB levels than the stormwater pond in the spring and summer, whereas the stormwater pond had higher chlorophyll levels than the tidal creek in the summer and fall seasons. Chlorophyll and FCB levels in the stormwater pond were significantly correlated with monthly average temperature and total rainfall. Pesticide concentrations were also significantly correlated with temperature and rainfall. Pesticide concentrations in the stormwater pond were significantly correlated with pesticide concentrations in the adjacent tidal creek. Chlorophyll and FCB levels in the tidal creek, however, were not significantly correlated with levels in the pond. While stormwater ponds are beneficial in controlling flooding, they may pose environmental and human health risks due to biological and chemical contamination. Management to reduce residential runoff may improve water quality in coastal stormwater ponds and their adjacent estuarine ecosystems.

Controlling factors of the seasonal variability of productivity in the southern Humboldt Current System (30-40°S): A biophysical modeling approach

NASA Astrophysics Data System (ADS)

Vergara, Odette A.; Echevín, Vincent; Sepúlveda, Héctor Hito; Quiñones, Renato A.

2017-09-01

The spatial and seasonal variability of nutrients and chlorophyll in the southern Humboldt Current System were assessed using a high-resolution regional ocean circulation model (ROMS) coupled to a biogeochemical model (Pelagic-Interactions Scheme for carbon and Ecosystem Studies; PISCES). The simulated nutrients and chlorophyll fields were validated using satellite and in situ observations at a continental shelf time-series station. The annual cycles of modeled chlorophyll and nutrients were consistent with the highest values observed in spring and summer, which is in agreement with enhanced upwelling observations. Co-limitation of phytoplankton growth by nutrients and light was analyzed for diatoms, the dominant phytoplankton group in the simulations. The results showed that co-limitation, near the coast, was governed in autumn and winter by light, and by silicate in spring and summer, whereas other nutrients were limiting offshore between January and April. Nutrient transport in the surface layer was analyzed. Vertical advection reflected areas with higher coastal upwelling, and was partly offset by horizontal processes related to eddy-induced transport from the nearshore to the open ocean. Vertical mixing was shown to play a key role in replenishing the surface layer with nutrients.

Vertical distribution of chlorophyll a concentration and phytoplankton community composition from in situ fluorescence profiles: a first database for the global ocean

NASA Astrophysics Data System (ADS)

Sauzède, R.; Lavigne, H.; Claustre, H.; Uitz, J.; Schmechtig, C.; D'Ortenzio, F.; Guinet, C.; Pesant, S.

2015-04-01

In vivo chlorophyll a fluorescence is a proxy of chlorophyll a concentration, and is one of the most frequently measured biogeochemical properties in the ocean. Thousands of profiles are available from historical databases and the integration of fluorescence sensors to autonomous platforms led to a significant increase of chlorophyll fluorescence profile acquisition. To our knowledge, this important source of environmental data has not yet been included in global analyses. A total of 268 127 chlorophyll fluorescence profiles from several databases as well as published and unpublished individual sources were compiled. Following a robust quality control procedure detailed in the present paper, about 49 000 chlorophyll fluorescence profiles were converted in phytoplankton biomass (i.e. chlorophyll a concentration) and size-based community composition (i.e. microphytoplankton, nanophytoplankton and picophytoplankton), using a~method specifically developed to harmonize fluorescence profiles from diverse sources. The data span over five decades from 1958 to 2015, including observations from all major oceanic basins and all seasons, and depths ranging from surface to a median maximum sampling depth of around 700 m. Global maps of chlorophyll a concentration and phytoplankton community composition are presented here for the first time. Monthly climatologies were computed for three of Longhurst's ecological provinces in order to exemplify the potential use of the data product. Original data sets (raw fluorescence profiles) as well as calibrated profiles of phytoplankton biomass and community composition are available in open access at PANGAEA, Data Publisher for Earth and Environmental Science. Raw fluorescence profiles: http://doi.pangaea.de/10.1594/PANGAEA.844212 and Phytoplankton biomass and community composition: http://doi.pangaea.de/10.1594/PANGAEA.844485.

The determination and quantification of photosynthetic pigments by reverse phase high-performance liquid chromatography, thin-layer chromatography, and spectrophotometry.

PubMed

Pocock, Tessa; Król, Marianna; Huner, Norman P A

2004-01-01

Chorophylls and carotenoids are functionally important pigment molecules in photosynthetic organisms. Methods for the determination of chlorophylls a and b, beta-carotene, neoxanthin, and the pigments that are involved in photoprotective cycles such as the xanthophylls are discussed. These cycles involve the reversible de-epoxidation of violaxanthin into antheraxanthin and zeaxanthin, as well as the reversible de-epoxidation of lutein-5,6-epoxide into lutein. This chapter describes pigment extraction procedures from higher plants and green algae. Methods for the determination and quantification using high-performance liquid chromatograpy (HPLC) are described as well as methods for the separation and purification of pigments for use as standards using thin-layer chromatography (TLC). In addition, several spectrophotometric methods for the quantification of chlorophylls a and b are described.

Diel Vertical Dynamics of Gelatinous Zooplankton (Cnidaria, Ctenophora and Thaliacea) in a Subtropical Stratified Ecosystem (South Brazilian Bight)

PubMed Central

Nogueira Júnior, Miodeli; Brandini, Frederico Pereira; Codina, Juan Carlos Ugaz

2015-01-01

The diel vertical dynamics of gelatinous zooplankton in physically stratified conditions over the 100-m isobath (~110 km offshore) in the South Brazilian Bight (26°45’S; 47°33’W) and the relationship to hydrography and food availability were analyzed by sampling every six hours over two consecutive days. Zooplankton samples were taken in three depth strata, following the vertical structure of the water column, with cold waters between 17 and 13.1°C, influenced by the South Atlantic Central Water (SACW) in the lower layer (>70 m); warm (>20°C) Tropical Water in the upper 40 m; and an intermediate thermocline with a deep chlorophyll-a maximum layer (0.3–0.6 mg m-3). Two distinct general patterns were observed, emphasizing the role of (i) physical and (ii) biological processes: (i) a strong influence of the vertical stratification, with most zooplankton absent or little abundant in the lower layer. The influence of the cold SACW on the bottom layer apparently restricted the vertical occupation of most species, which typically inhabit epipelagic warm waters. Even among migratory species, only a few (Aglaura hemistoma, Abylopsis tetragona eudoxids, Beroe sp., Thalia democratica, Salpa fusiformis) crossed the thermocline and reached the bottom layer. (ii) A general tendency of partial migrations, with variable intensity depending on the different species and developmental stages; populations tended to be more widely distributed through the water column during daylight, and to become more aggregated in the upper layer during the night, which can be explained based on the idea of the “hunger-satiation hypothesis”, maximizing feeding and minimizing the chances of being predated. PMID:26637179

Diel Vertical Dynamics of Gelatinous Zooplankton (Cnidaria, Ctenophora and Thaliacea) in a Subtropical Stratified Ecosystem (South Brazilian Bight).

PubMed

Nogueira Júnior, Miodeli; Brandini, Frederico Pereira; Codina, Juan Carlos Ugaz

2015-01-01

The diel vertical dynamics of gelatinous zooplankton in physically stratified conditions over the 100-m isobath (~110 km offshore) in the South Brazilian Bight (26°45'S; 47°33'W) and the relationship to hydrography and food availability were analyzed by sampling every six hours over two consecutive days. Zooplankton samples were taken in three depth strata, following the vertical structure of the water column, with cold waters between 17 and 13.1°C, influenced by the South Atlantic Central Water (SACW) in the lower layer (>70 m); warm (>20°C) Tropical Water in the upper 40 m; and an intermediate thermocline with a deep chlorophyll-a maximum layer (0.3-0.6 mg m-3). Two distinct general patterns were observed, emphasizing the role of (i) physical and (ii) biological processes: (i) a strong influence of the vertical stratification, with most zooplankton absent or little abundant in the lower layer. The influence of the cold SACW on the bottom layer apparently restricted the vertical occupation of most species, which typically inhabit epipelagic warm waters. Even among migratory species, only a few (Aglaura hemistoma, Abylopsis tetragona eudoxids, Beroe sp., Thalia democratica, Salpa fusiformis) crossed the thermocline and reached the bottom layer. (ii) A general tendency of partial migrations, with variable intensity depending on the different species and developmental stages; populations tended to be more widely distributed through the water column during daylight, and to become more aggregated in the upper layer during the night, which can be explained based on the idea of the "hunger-satiation hypothesis", maximizing feeding and minimizing the chances of being predated.

Spectroscopic study of the microbial community in chemocline zones of relic meromictic lakes separating from the White Sea

NASA Astrophysics Data System (ADS)

Kharcheva, Anastasia V.; Krasnova, Elena D.; Voronov, Dmitry A.; Patsaeva, Svetlana V.

2015-03-01

As a result of a recent years study on the Karelia shore of the White Sea more than ten relict lakes in different stages of separation from the sea have been discovered. Five of them are located close to the Nikolai Pertsov White Sea Biological Station of Moscow State University. Such separated lakes are interesting to explore for their firm vertical stratification. Water layers differ not only by temperature, salinity and other physic and chemical characteristics and optical properties, but also by ibhabiting microorganisms and by the quality of dissolved organic matter. To study phototropic organisms in water sampled from different depths we used spectroscopic techniques. Identification of the main bands in the absorption and fluorescence spectra showed that there are two main groups of photosynthetic organisms in the redox zone (chemocline): unicellular algae containing chlorophyll a and green sulfur bacteria with bacteriochlorophylls c, d, e. Spectral data were compared with physical and chemical characteristics of the water layer (temperature, salinity, pH, dissolved oxygen and sunlight illumination at certain depth). It gave an opportunity to compare vertical profiles of oxygen and hydrogen sulphide concentration with the number and distribution of oxygenic and anoxygenic phototrophic microorganisms. Maximum abundance of both algae and green sulfur bacteria were achieved within the redox zone. Typical thickness of the layer with the highest concentration of microorganisms did not exceed 10-20 cm.

Autumn larval fish assemblages in the northwest African Atlantic coastal zone

NASA Astrophysics Data System (ADS)

Abdelouahab, Hinde; Berraho, Amina; Baibai, Tarik; Agouzouk, Aziz; Makaoui, Ahmed; Errhif, Ahmed

2017-05-01

A study on the assemblage composition and vertical distribution of larval fish was conducted in the southern area of the Moroccan Atlantic coast in Autumn 2011. A total of 1 680 fish larvae taxa were identified from 21 families. The majority of the larvae were present in the upper layers. Clupeids were the most abundant larvae taxa followed by Myctophidae, Gadidae and Sparidae, hence the larval fish assemblages (LFA) were variable in diff erent depth layers. Total fish larvae showed a preference for surface layers, and were mainly found above 75 m depth, with some exceptions. The maximum concentration of fish larvae was concentrated up to 25 m essentially above the thermocline, where chlorophyll a and mesozooplankton were abundant. Spatially, neritic families were located near the coast and at some off shore stations especially in the northern part, while oceanic families were more distributed towards off shore along the study area. Cluster analysis showed a segregation of two groups of larvae. However, a clear separation between neritic families and oceanic families was not found. Multivariate analysis highlighted the relationship between the distribution of larvae of diff erent families and environmental parameters. Temperature and salinity seem to have been the factors that acted on associations of fish larvae. Day/night vertical distributions suggest there was not a very significant vertical migration, probably due to adequate light levels for feeding.

The most oligotrophic subtropical zones of the global ocean: similarities and differences in terms of chlorophyll and yellow substance

NASA Astrophysics Data System (ADS)

Morel, A.; Claustre, H.; Gentili, B.

2010-10-01

The cores of the subtropical anticyclonic gyres are characterized by their oligotrophic status and minimal chlorophyll concentration, compared to that of the whole ocean. These zones are unambiguously detected by space borne ocean color sensors thanks to their typical spectral reflectance, which is that of extremely clear and deep blue waters. Not only the low chlorophyll (denoted [Chl]) level, but also a reduced amount of colored dissolved organic matter (CDOM or "yellow substance") account for this clarity. The oligotrophic waters of the North and South Pacific gyres, the North and South Atlantic gyres, and the South Indian gyre have been comparatively studied with respect to both [Chl] and CDOM contents, by using 10-year data (1998-2007) of the Sea-viewing Wide field-of-view Sensor (SeaWiFS, NASA). Albeit similar these oligotrophic zones are not identical regarding their [Chl] and CDOM contents, as well as their seasonal cycles. According to the zone, the averaged [Chl] value varies from 0.026 to 0.059 mg m-3, whereas the ay(443) average (the absorption coefficient due to CDOM at 443 nm) is between 0.0033 and 0.0072 m-1. The CDOM-to-[Chl] relative proportions also differ between the zones. The clearest waters, corresponding to the lowest [Chl] and CDOM concentrations, are found near Easter Island and near Mariana Islands in the western part of the North Pacific Ocean. In spite of its low [Chl], the Sargasso Sea presents the highest CDOM content amongst the six zones studied. Except in the North Pacific gyre (near Mariana and south of Hawaii islands), a conspicuous seasonality appears to be the rule in the other 4 gyres and affects both [Chl] and CDOM; both quantities vary in a ratio of about 2 (maximum-to-minimum). Coinciding [Chl] and CDOM peaks occur just after the local winter solstice, which is also the period of the maximal mixed layer depth in these latitudes. It is hypothesized that the vertical transport of unbleached CDOM from the subthermocline layers is the main process enhancing the CDOM concentration within the upper layer in winter. In summer, the CDOM experiences its minimum which is delayed with respect to the [Chl] minimum; apparently, the solar photo-bleaching of CDOM is a slower process than the post-bloom algal Chl decay. Where they exist, the seasonal cycles are repeated without notable change from year to year. Long term (10 y) trends have not been detected in these zones. These oligotrophic gyres can conveniently be used for in-flight calibration and comparison of ocean color sensors, provided that their marked seasonal variations are accounted for.

The most oligotrophic subtropical zones of the global ocean: similarities and differences in terms of chlorophyll and yellow substance

NASA Astrophysics Data System (ADS)

Morel, A.; Claustre, H.; Gentili, B.

2010-07-01

The cores of the subtropical anticyclonic gyres are characterized by their oligotrophic status and minimal chlorophyll concentration, compared to that of the whole ocean. These zones are unambiguously detected by space borne ocean color sensors thanks to their typical spectral reflectance, which is that of extremely clear and deep blue waters. Not only the low chlorophyll (denoted [Chl]) level, but also a reduced amount of colored dissolved organic matter (CDOM or "yellow substance") account for this clarity. The oligotrophic waters of the North and South Pacific gyres, the North and South Atlantic gyres, and the South Indian gyre have been comparatively studied with respect to both [Chl] and CDOM contents, by using 10-year data (1998-2007) of the Sea-viewing Wide field-of-view Sensor (SeaWiFS, NASA). Albeit similar these oligotrophic zones are not identical regarding their [Chl] and CDOM contents, as well as their seasonal cycles. According to the zone, the averaged [Chl] value varies from 0.026 to 0.059 mg m-3, whereas the ay(443) average (the absorption coefficient due to CDOM at 443 nm) is comprised between 0.0033 and 0.0072 m-1. The CDOM-to-[Chl] relative proportions also differ between the zones. The clearest waters, corresponding to the lowest [Chl] and CDOM concentrations, are found near Easter Island and near Mariana Islands in the western part of the North Pacific Ocean. In spite of its low [Chl], the Sargasso Sea presents the highest CDOM content amongst the six zones studied. Except in the North Pacific gyre (near Mariana and south of Hawaii islands), a conspicuous seasonality appears to be the rule in the other 4 gyres and affects both [Chl] and CDOM; both quantities vary in a ratio of about 2 (maximum-to-minimum). Coinciding [Chl] and CDOM peaks occur just after the local winter solstice, which is also the period of the maximal mixed layer depth in these latitudes. It is hypothesized that the vertical transport of unbleached CDOM from the subthermocline layers is the main process enhancing the CDOM concentration within the upper layer in winter. In summer, the CDOM experiences its minimum which is delayed with respect to the [Chl] minimum; apparently, the solar photo-bleaching of CDOM is a slower process than the post-bloom algal Chl decay. Where they exist, the seasonal cycles are repeated without notable change from year to year; long term (10 years) trends have not been detected in these zones. These oligotrophic gyres can conveniently be used for in-flight calibration and comparison of ocean color sensors, provided that their marked seasonal variations are accounted for.

Seasonal nutrient and plankton dynamics in a physical-biological model of Crater Lake

USGS Publications Warehouse

Fennel, K.; Collier, R.; Larson, G.; Crawford, G.; Boss, E.

2007-01-01

A coupled 1D physical-biological model of Crater Lake is presented. The model simulates the seasonal evolution of two functional phytoplankton groups, total chlorophyll, and zooplankton in good quantitative agreement with observations from a 10-year monitoring study. During the stratified period in summer and early fall the model displays a marked vertical structure: the phytoplankton biomass of the functional group 1, which represents diatoms and dinoflagellates, has its highest concentration in the upper 40 m; the phytoplankton biomass of group 2, which represents chlorophyta, chrysophyta, cryptomonads and cyanobacteria, has its highest concentrations between 50 and 80 m, and phytoplankton chlorophyll has its maximum at 120 m depth. A similar vertical structure is a reoccurring feature in the available data. In the model the key process allowing a vertical separation between biomass and chlorophyll is photoacclimation. Vertical light attenuation (i.e., water clarity) and the physiological ability of phytoplankton to increase their cellular chlorophyll-to-biomass ratio are ultimately determining the location of the chlorophyll maximum. The location of the particle maxima on the other hand is determined by the balance between growth and losses and occurs where growth and losses equal. The vertical particle flux simulated by our model agrees well with flux measurements from a sediment trap. This motivated us to revisit a previously published study by Dymond et al. (1996). Dymond et al. used a box model to estimate the vertical particle flux and found a discrepancy by a factor 2.5-10 between their model-derived flux and measured fluxes from a sediment trap. Their box model neglected the exchange flux of dissolved and suspended organic matter, which, as our model and available data suggests is significant for the vertical exchange of nitrogen. Adjustment of Dymond et al.'s assumptions to account for dissolved and suspended nitrogen yields a flux estimate that is consistent with sediment trap measurements and our model. ?? 2007 Springer Science+Business Media B.V.

Integrating seasonal information on nutrients and benthic algal biomass into stream water quality monitoring

USGS Publications Warehouse

Konrad, Christopher P.; Munn, Mark D.

2016-01-01

Benthic chlorophyll a (BChl a) and environmental factors that influence algal biomass were measured monthly from February through October in 22 streams from three agricultural regions of the United States. At-site maximum BChl a ranged from 14 to 406 mg/m2 and generally varied with dissolved inorganic nitrogen (DIN): 8 out of 9 sites with at-site median DIN >0.5 mg/L had maximum BChl a >100 mg/m2. BChl aaccrued and persisted at levels within 50% of at-site maximum for only one to three months. No dominant seasonal pattern for algal biomass accrual was observed in any region. A linear model with DIN, water surface gradient, and velocity accounted for most of the cross-site variation in maximum chlorophyll a(adjusted R2 = 0.7), but was no better than a single value of DIN = 0.5 mg/L for distinguishing between low and high-biomass sites. Studies of nutrient enrichment require multiple samples to estimate algal biomass with sufficient precision given the magnitude of temporal variability of algal biomass. An effective strategy for regional stream assessment of nutrient enrichment could be based on a relation between maximum BChl a and DIN based on repeat sampling at sites selected to represent a gradient in nutrients and application of the relation to a larger number of sites with synoptic nutrient information.

Comparing springtime ice-algal chlorophyll a and physical properties of multi-year and first-year sea ice from the Lincoln Sea.

PubMed

Lange, Benjamin A; Michel, Christine; Beckers, Justin F; Casey, J Alec; Flores, Hauke; Hatam, Ido; Meisterhans, Guillaume; Niemi, Andrea; Haas, Christian

2015-01-01

With near-complete replacement of Arctic multi-year ice (MYI) by first-year ice (FYI) predicted to occur within this century, it remains uncertain how the loss of MYI will impact the abundance and distribution of sea ice associated algae. In this study we compare the chlorophyll a (chl a) concentrations and physical properties of MYI and FYI from the Lincoln Sea during 3 spring seasons (2010-2012). Cores were analysed for texture, salinity, and chl a. We identified annual growth layers for 7 of 11 MYI cores and found no significant differences in chl a concentration between the bottom first-year-ice portions of MYI, upper old-ice portions of MYI, and FYI cores. Overall, the maximum chl a concentrations were observed at the bottom of young FYI. However, there were no significant differences in chl a concentrations between MYI and FYI. This suggests little or no change in algal biomass with a shift from MYI to FYI and that the spatial extent and regional variability of refrozen leads and younger FYI will likely be key factors governing future changes in Arctic sea ice algal biomass. Bottom-integrated chl a concentrations showed negative logistic relationships with snow depth and bulk (snow plus ice) integrated extinction coefficients; indicating a strong influence of snow cover in controlling bottom ice algal biomass. The maximum bottom MYI chl a concentration was observed in a hummock, representing the thickest ice with lowest snow depth of this study. Hence, in this and other studies MYI chl a biomass may be under-estimated due to an under-representation of thick MYI (e.g., hummocks), which typically have a relatively thin snowpack allowing for increased light transmission. Therefore, we suggest the on-going loss of MYI in the Arctic Ocean may have a larger impact on ice-associated production than generally assumed.

Comparing Springtime Ice-Algal Chlorophyll a and Physical Properties of Multi-Year and First-Year Sea Ice from the Lincoln Sea

PubMed Central

Lange, Benjamin A.; Michel, Christine; Beckers, Justin F.; Casey, J. Alec; Flores, Hauke; Hatam, Ido; Meisterhans, Guillaume; Niemi, Andrea; Haas, Christian

2015-01-01

With near-complete replacement of Arctic multi-year ice (MYI) by first-year ice (FYI) predicted to occur within this century, it remains uncertain how the loss of MYI will impact the abundance and distribution of sea ice associated algae. In this study we compare the chlorophyll a (chl a) concentrations and physical properties of MYI and FYI from the Lincoln Sea during 3 spring seasons (2010-2012). Cores were analysed for texture, salinity, and chl a. We identified annual growth layers for 7 of 11 MYI cores and found no significant differences in chl a concentration between the bottom first-year-ice portions of MYI, upper old-ice portions of MYI, and FYI cores. Overall, the maximum chl a concentrations were observed at the bottom of young FYI. However, there were no significant differences in chl a concentrations between MYI and FYI. This suggests little or no change in algal biomass with a shift from MYI to FYI and that the spatial extent and regional variability of refrozen leads and younger FYI will likely be key factors governing future changes in Arctic sea ice algal biomass. Bottom-integrated chl a concentrations showed negative logistic relationships with snow depth and bulk (snow plus ice) integrated extinction coefficients; indicating a strong influence of snow cover in controlling bottom ice algal biomass. The maximum bottom MYI chl a concentration was observed in a hummock, representing the thickest ice with lowest snow depth of this study. Hence, in this and other studies MYI chl a biomass may be under-estimated due to an under-representation of thick MYI (e.g., hummocks), which typically have a relatively thin snowpack allowing for increased light transmission. Therefore, we suggest the on-going loss of MYI in the Arctic Ocean may have a larger impact on ice–associated production than generally assumed. PMID:25901605

Nitrogen removal in maturation waste stabilisation ponds via biological uptake and sedimentation of dead biomass.

PubMed

Camargo Valero, M A; Mara, D D; Newton, R J

2010-01-01

In this work a set of experiments was undertaken in a pilot-scale WSP system to determine the importance of organic nitrogen sedimentation on ammonium and total nitrogen removals in maturation ponds and its seasonal variation under British weather conditions, from September 2004 to May 2007. The nitrogen content in collected sediment samples varied from 4.17% to 6.78% (dry weight) and calculated nitrogen sedimentation rates ranged from 273 to 2868 g N/ha d. High ammonium removals were observed together with high concentrations of chlorophyll-a in the pond effluent. Moreover, chlorophyll-a had a very good correlation with the corresponding increment of VSS (algal biomass) and suspended organic nitrogen (biological nitrogen uptake) in the maturation pond effluents. Therefore, when ammonium removal reached its maximum, total nitrogen removal was very poor as most of the ammonia taken up by algae was washed out in the pond effluent in the form of suspended solids. After sedimentation of the dead algal biomass, it was clear that algal-cell nitrogen was recycled from the sludge layer into the pond water column. Recycled nitrogen can either be taken up by algae or washed out in the pond effluent. Biological (mainly algal) uptake of inorganic nitrogen species and further sedimentation of dead biomass (together with its subsequent mineralization) is one of the major mechanisms controlling in-pond nitrogen recycling in maturation WSP, particularly when environmental and operational conditions are favourable for algal growth.

Phytoplankton characteristics and hydrological conditions in the western part of the Sea of Okhotsk in the spring of 1999 and 2000 based on expeditionary and satellite data

NASA Astrophysics Data System (ADS)

Zakharkov, S. P.; Selina, M. S.; Vanin, N. S.; Shtraikhert, E. A.; Biebov, N.

2007-08-01

Using the data obtained in 1999 2000 during the spring bloom of phytoplankton (late May early June), the variability of the pigment concentrations, the phytoplankton biomass and species compositions, and the hydrological conditions on the eastern shelf of Sakhalin Island was studied. The study resulted in revealing 135 microalgae species belonging to eight divisions. The most diversely presented were the Dinophyta dinoflagellates and Bacillariophyta diatoms (70 and 53 species, respectively). The concentration of chlorophyll a in the euphotic zone amounted, on average, to 3.8 mg/m3 in 1999 and 2.4 mg/m3 in 2000. It was shown that, in the northern and southern parts of the coastal zone, the concentration of chlorophyll a and the phytoplankton density in the spring were considerably different and depended on the hydrological conditions. In the north, their maximum values were found in the area of the depth break and were determined by the tidal mixing. The increased algae concentrations and temperature inversions at depths of 400 600 m confirm the downslope sliding of the near-bottom shelf waters. In the southern part, the high phytoplankton concentrations in the surface layer in 1999 confirmed by the monthly averaged estimates from the SeaWiFS satellite color scanner were caused by the abnormal northward propagation of the Soya Current waters and by intense tidal mixing.

Eutrophic water purification efficiency using a combination of hydrodynamic cavitation and ozonation on a pilot scale.

PubMed

Li, Wei-Xin; Tang, Chuan-Dong; Wu, Zhi-Lin; Wang, Wei-Min; Zhang, Yu-Feng; Zhao, Yi; Cravotto, Giancarlo

2015-04-01

This paper presents the purification of eutrophic water using a combination of hydrodynamic cavitation (HC) and ozonation (O3) at a continuous flow of 0.8 m(3) h(-1) on a pilot scale. The maximum removal rate of chlorophyll a using O3 alone and the HC/O3 combination was 62.3 and 78.8%, respectively, under optimal conditions, where the ozone utilization efficiency was 64.5 and 94.8% and total energy consumption was 8.89 and 8.25 kWh m(-3), respectively. Thus, the removal rate of chlorophyll a and the ozone utilization efficiency were improved by 26.5% and 46.9%, respectively, by using the combined technique. Meanwhile, total energy consumption was reduced by 7.2%. Turbidity linearly decreased with chlorophyll a removal rate, but no linear relationship exists between the removal of COD or UV254 and chlorophyll a. As expected, the suction-cavitation-assisted O3 exhibited higher energy efficiency than the extrusion-cavitation-assisted O3 and O3 alone methods.

Cyanobacterial bloom in the world largest freshwater lake Baikal

NASA Astrophysics Data System (ADS)

Namsaraev, Zorigto; Melnikova, Anna; Ivanov, Vasiliy; Komova, Anastasia; Teslyuk, Anton

2018-02-01

Lake Baikal is a UNESCO World Heritage Site and holds 20% of the world’s freshwater reserves. On July 26, 2016, a cyanobacterial bloom of a green colour a few kilometers in size with a bad odor was discovered by local people in the Barguzinsky Bay on the eastern shore of Lake Baikal. Our study showed very high concentration of chlorophyll a (41.7 g/m3) in the sample of bloom. We found that the bloom was dominated by a nitrogen-fixing heterocystous cyanobacteria of the genus Dolichospermum. The mass accumulation of cyanobacteria in the lake water with an extremely high chlorophyll a concentration can be explained by a combination of several factors: the discharge of biologicaly-available nutrients, including phosphorus, into the water of Lake Baikal; low wind speed and weak water mixing; buoyant cyanobacterial cells on the lake surface, which drifted towards the eastern coast, where the maximum concentration of chlorophyll a was recorded. In the center of the Barguzinsky Bay and in the open part of Lake Baikal, according to satellite data, the chlorophyll a concentration is several orders of magnitude lower than at the shoreline.

Ocean Processes Revealing by Seasonal Dynamics of Surface Chlorophyll Concentration (by Satellite Data)

NASA Astrophysics Data System (ADS)

Shevyrnogov, Anatoly; Vysotskaya, Galina

Continuous monitoring of phytopigment concentrations in the ocean by space-borne methods makes possible to estimate ecological condition of biocenoses in critical areas. Unlike land vege-tation, hydrological processes largely determine phytoplankton dynamics, which may be either recurrent or random. The types of chlorophyll concentration dynamics can manifest as zones quasistationary by seasonal chlorophyll dynamics, perennial variations of phytopigment con-centrations, anomalous variations, etc., that makes possible revealing of hydrological structure of the ocean. While large-scale and frequently occurring phenomena have been much studied, the seldom-occurring changes of small size may be of interest for analysis of long-term processes and rare natural variations. Along with this, the ability to reflect consequences of anthropoge-nous impact or natural ecological disasters on the ocean biota makes the anomalous variations ecologically essential. Civilization aspiring for steady development and preservation of the bio-sphere, must have the knowledge of spatial distribution, seasonal dynamics and anomalies of the primary production process on the planet. In the papers of the authors (Shevyrnogov A.P., Vysotskaya G.S., Gitelzon J.I. Quasistationary areas of chlorophyll concentration in the world ocean as observed satellite data. Adv. Space Res. Vol. 18, No. 7, pp. 129-132, 1996) existence of zones, which are quasi-stationary with similar seasonal dynamics of chlorophyll concentration at surface layer of ocean, was shown. Results were obtained on the base of pro-cessing of time series of satellite images SeaWiFS. It was shown that fronts and frontal zones coincide with dividing lines between quasi-stationary areas, especially in areas of large oceanic streams. Biota of surface oceanic layer is more stable in comparison with quickly changing sur-face temperature. It gives a possibility to circumvent influence of high-frequency component (for example, a diurnal cycle) in investigation of dynamics of spatial distribution of surface streams. In addition, an analyses of nonstable ocean productivity phenomena, stood out time series of satellite images, showed existence of areas with different types of instability in the all Global ocean. They are observed as adjacent nonstationary zones of different size, which are associated by different ways with known oceanic phenomena. It is evident that dynamics of a spatial distribution of biological productivity can give an additional knowledge of complicated picture of surface oceanic layer hydrology.

Combined effects of lead and acid rain on photosynthesis in soybean seedlings.

PubMed

Hu, Huiqing; Wang, Lihong; Liao, Chenyu; Fan, Caixia; Zhou, Qing; Huang, Xiaohua

2014-10-01

To explore how lead (Pb) and acid rain simultaneously affect plants, the combined effects of Pb and acid rain on the chlorophyll content, chlorophyll fluorescence reaction, Hill reaction rate, and Mg(2+)-ATPase activity in soybean seedlings were investigated. The results indicated that, when soybean seedlings were treated with Pb or acid rain alone, the chlorophyll content, Hill reaction rate, Mg(2+)-ATPase activity, and maximal photochemical efficiency (F(v)/F(m)) were decreased, while the initial fluorescence (F 0) and maximum quantum yield (Y) were increased, compared with those of the control. The combined treatment with Pb and acid rain decreased the chlorophyll content, Hill reaction rate, Mg(2+)-ATPase activity, F(v)/F(m), and Y and increased F 0 in soybean seedlings. Under the combined treatment with Pb and acid rain, the two factors showed additive effects on the chlorophyll content in soybean seedlings and exhibited antagonistic effects on the Hill reaction rate. Under the combined treatment with high-concentration Pb and acid rain, the two factors exhibited synergistic effects on the Mg(2+)-ATPase activity, F 0, F v/F m, as well as Y. In summary, the inhibition of the photosynthetic process is an important physiological basis for the simultaneous actions of Pb and acid rain in soybean seedlings.

An underwater light attenuation scheme for marine ecosystem models.

PubMed

Penta, Bradley; Lee, Zhongping; Kudela, Raphael M; Palacios, Sherry L; Gray, Deric J; Jolliff, Jason K; Shulman, Igor G

2008-10-13

Simulation of underwater light is essential for modeling marine ecosystems. A new model of underwater light attenuation is presented and compared with previous models. In situ data collected in Monterey Bay, CA. during September 2006 are used for validation. It is demonstrated that while the new light model is computationally simple and efficient it maintains accuracy and flexibility. When this light model is incorporated into an ecosystem model, the correlation between modeled and observed coastal chlorophyll is improved over an eight-year time period. While the simulation of a deep chlorophyll maximum demonstrates the effect of the new model at depth.

The correlation of the maximum intensity of fluorescence with pigment characteristics of leaves of Betula pendula

NASA Astrophysics Data System (ADS)

Zavoruev, V. V.; Zavorueva, E. N.

2015-11-01

Using fluorimeter Junior PAM (Heinz Walz GmbH, Germany) the fluorescence parameters of leaves of Betula pendula are investigated. A linear dependence of the maximum fluorescence (Fm) of leaves from the ratio of total chlorophylls concentration to concentration of carotenoids is obtained. Such dependence is found for samples collected during the period of vegetation and for simultaneous selection of colored leaves.

Elevated ozone negatively affects photosynthesis of current-year leaves but not previous-year leaves in evergreen Cyclobalanopsis glauca seedlings.

PubMed

Zhang, Weiwei; Feng, Zhaozhong; Wang, Xiaoke; Niu, Junfeng

2014-01-01

To assess the effects of leaf age/layer on the response of photosynthesis to chronic ozone (O3), Cyclobalanopsis glauca seedlings, a dominant evergreen broadleaf tree species in sub-tropical regions, were exposed to either ambient air (AA) or elevated O3 (AA + 60 ppb O3, E-O3) for two growing seasons in open-top chambers. Chlorophyll content, gas exchange and chlorophyll a fluorescence were investigated three times throughout the 2nd year of O3 exposure. Results indicated that E-O3 decreased photosynthetic parameters, particularly light-saturated photosynthesis rate, stomatal conductance and effective quantum yield of PSII photochemistry of current-year leaves but not previous-year leaves. Stomatal conductance of plants grown under ambient conditions partially contributed to the different response to E-O3 between leaf layers. Light radiation or other physiological and biochemical processes closely related to photosynthesis might play important roles. All suggested that leaf ages or layers should be considered when assessing O3 risk on evergreen woody species. Copyright © 2013 Elsevier Ltd. All rights reserved.

A niche for cyanobacteria producing chlorophyll f within a microbial mat.

PubMed

Ohkubo, Satoshi; Miyashita, Hideaki

2017-10-01

Acquisition of additional photosynthetic pigments enables photosynthetic organisms to survive in particular niches. To reveal the ecological significance of chlorophyll (Chl) f, we investigated the distribution of Chl and cyanobacteria within two microbial mats. In a 7-mm-thick microbial mat beneath the running water of the Nakabusa hot spring, Japan, Chl f was only distributed 4.0-6.5 mm below the surface, where the intensity of far-red light (FR) was higher than that of photosynthetically active radiation (PAR). In the same mat, two ecotypes of Synechococcus and two ecotypes of Chl f-producing Leptolyngbya were detected in the upper and deeper layers, respectively. Only the Leptolyngbya strains could grow when FR was the sole light source. These results suggest that the deeper layer of the microbial mat was a habitat for Chl f-producing cyanobacteria, and Chl f enabled them to survive in a habitat with little PAR.

[Effects of acid rain stress on Eleocarpus glabripetalus seedlings leaf chlorophyll fluorescence characteristics and growth].

PubMed

Yin, Xiu-Min; Yu, Shu-Quan; Jiang, Hong; Liu, Mei-Hu

2010-06-01

A pot experiment was conducted to study the Eleocarpus glabripetalus seedlings leaf chlorophyll fluorescence characteristics and growth in different seasons under simulated acid rain stress (heavy, pH = 2. 5; moderate, pH = 4.0; and control, pH = 5.6). In the same treatments, the leaf relative chlorophyll content (SPAD), maximum PS II photochemical efficiency (F(v)/F(m)), actual PSII photochemical quantum yield (phi(PS II)), plant height, and stem diameter in different seasons were all in the order of October > July > April > January. In the same seasons, all the parameters were in the order of heavy acid rain > moderate acid rain > control. The interactions between different acid rain stress and seasons showed significant effects on the SPAD, F(v)/F(m), plant height, and stem diameter, but lesser effects on phi(PS II), qp and qN.

A Unimodal Species Response Model Relating Traits to Environment with Application to Phytoplankton Communities

PubMed Central

Jamil, Tahira; Kruk, Carla; ter Braak, Cajo J. F.

2014-01-01

In this paper we attempt to explain observed niche differences among species (i.e. differences in their distribution along environmental gradients) by differences in trait values (e.g. volume) in phytoplankton communities. For this, we propose the trait-modulated Gaussian logistic model in which the niche parameters (optimum, tolerance and maximum) are made linearly dependent on species traits. The model is fitted to data in the Bayesian framework using OpenBUGS (Bayesian inference Using Gibbs Sampling) to identify according to which environmental variables there is niche differentiation among species and traits. We illustrate the method with phytoplankton community data of 203 lakes located within four climate zones and associated measurements on 11 environmental variables and six morphological species traits of 60 species. Temperature and chlorophyll-a (with opposite signs) described well the niche structure of all species. Results showed that about 25% of the variance in the niche centres with respect to chlorophyll-a were accounted for by traits, whereas niche width and maximum could not be predicted by traits. Volume, mucilage, flagella and siliceous exoskeleton are found to be the most important traits to explain the niche centres. Species were clustered in two groups with different niches structures, group 1 high temperature-low chlorophyll-a species and group 2 low temperature-high chlorophyll-a species. Compared to group 2, species in group 1 had larger volume but lower surface area, had more often flagella but neither mucilage nor siliceous exoskeleton. These results might help in understanding the effect of environmental changes on phytoplankton community. The proposed method, therefore, can also apply to other aquatic or terrestrial communities for which individual traits and environmental conditioning factors are available. PMID:24835582

Resource-limited heterotrophic prokaryote production and its potential environmental impact associated with Mn nodule exploitation in the northeast equatorial pacific.

PubMed

Hyun, Jung-Ho

2006-08-01

Shipboard enrichment incubation experiments were performed to elucidate the limiting resources for heterotrophic prokaryotic production and to discuss the potential impact of bottom water and sediment discharges in relation to manganese (Mn) nodule exploitation on the heterotrophic prokaryotes in the oligotrophic northeast equatorial Pacific. Compared to an unamended control, the production of heterotrophic prokaryotes increased 25-fold in water samples supplemented with amino acids (i.e., organic carbon plus nitrogen), whereas the production increased five and two times, respectively, in samples supplemented with either glucose or ammonium alone. These results indicate that heterotrophic prokaryote production in the northeast equatorial Pacific was co-limited by the availability of dissolved organic carbon and inorganic nitrogen. In samples from the nutrient-depleted surface mixed layer (10-m depth), the addition of a slurry of bottom water and sediment doubled heterotrophic prokaryote production compared to an unamended control, whereas sonicating the slurry prior to addition quadrupled the production rate. However, little difference was observed between an unamended control and slurry-amended samples in the subsurface chlorophyll a (Chl a) maximum (SCM) layer. Thus, the impact of slurry discharge is more significant at the nutrient-depleted surface mixed layer than at the high-nutrient SCM layer. The greatly enhanced prokaryote production resulting from the addition of sonicated slurry further suggests that dissociated organic carbon may directly stimulate heterotrophic prokaryote production in the surface mixed layer. Overall, the results suggest that the surface discharge of bottom water and sediments during manganese nodule exploitation could have a significant environmental impact on the production of heterotrophic prokaryotes that are currently resource limited.

How to avoid eutrophication in coastal seas? A new approach to derive river-specific combined nitrate and phosphate maximum concentrations.

PubMed

Ménesguen, Alain; Desmit, Xavier; Dulière, Valérie; Lacroix, Geneviève; Thouvenin, Bénédicte; Thieu, Vincent; Dussauze, Morgan

2018-07-01

Since 1950, increase in nitrogen (N) and phosphorus (P) river loadings in the North-East Atlantic (NEA) continental seas has induced a deep change in the marine coastal ecosystems, leading to eutrophication symptoms in some areas. In order to recover a Good Ecological Status (GES) in the NEA, as required by European Water Framework Directive (WFD) and Marine Strategy Framework Directive (MSFD), reductions in N- and P-river loadings are necessary but they need to be minimal due to their economic impact on the farming industry. In the frame of the "EMoSEM" European project, we used two marine 3D ecological models (ECO-MARS3D, MIRO&CO) covering the Bay of Biscay, the English Channel and the southern North Sea to estimate the contributions of various sources (riverine, oceanic and atmospheric) to the winter nitrate and phosphate marine concentrations. The various distributed descriptors provided by the simulations allowed also to find a log-linear relationship between the 90th percentile of satellite-derived chlorophyll concentrations and the "fully bioavailable" nutrients, i.e. simulated nutrient concentrations weighted by light and stoichiometric limitation factors. Any GES threshold on the 90th percentile of marine chlorophyll concentration can then be translated in maximum admissible 'fully bioavailable' DIN and DIP concentrations, from which an iterative linear optimization method can compute river-specific minimal abatements of N and P loadings. The method has been applied to four major river groups, assuming either a conservative (8μgChlL -1 ) or a more socially acceptable (15μgChlL -1 ) GES chlorophyll concentration threshold. In the conservative case, maximum admissible winter concentrations for nutrients correspond to marine background values, whereas in the lenient case, they are close to values recommended by the WFD/MSFD. Both models suggest that to reach chlorophyll GES, strong reductions of DIN and DIP are required in the Eastern French and Belgian-Dutch river groups. Copyright © 2018 Elsevier B.V. All rights reserved.

Dissolved Phosphorus Pools and Alkaline Phosphatase Activity in the Euphotic Zone of the Western North Pacific Ocean

PubMed Central

Suzumura, Masahiro; Hashihama, Fuminori; Yamada, Namiha; Kinouchi, Shinko

2012-01-01

We measured pools of dissolved phosphorus (P), including dissolved inorganic P (DIP), dissolved organic P (DOP) and alkaline phosphatase (AP)-hydrolyzable labile DOP (L-DOP), and kinetic parameters of AP activity (APA) in the euphotic zone in the western North Pacific Ocean. Samples were collected from one coastal station in Sagami Bay, Japan, and three offshore stations between the North Pacific subtropical gyre (NPSG) and the Kuroshio region. Although DIP concentrations in the euphotic zone at all stations were equally low, around the nominal method detection limit of 20 nmol L-1, chlorophyll a (Chl a) concentrations were one order of magnitude greater at the coastal station. DOP was the dominant P pool, comprising 62–92% of total dissolved P at and above the Chl a maximum layer (CML). L-DOP represented 22–39% of the total DOP at the offshore stations, whereas it accounted for a much higher proportion (about 85%) in the coastal surface layers. Significant correlations between maximum potential AP hydrolysis rates and DIP concentrations or bacterial cell abundance in the offshore euphotic zone suggest that major APA in the oligotrophic surface ocean is from bacterial activity and regulated largely by DIP availability. Although the range of maximum potential APA was comparable among the environmental conditions, the in situ hydrolysis rate of L-DOP in the coastal station was 10 times those in the offshore stations. L-DOP turnover time at the CML ranged from 4.5 days at the coastal station to 84.4 days in the NPSG. The ratio of the APA half-saturation constant to the ambient L-DOP concentration decreased markedly from the NPSG to the coastal station. There were substantial differences in the rate and efficiency of DOP remineralization and its contribution as the potential P source between the low-phosphate/high-biomass coastal ecosystem and the low-phosphate/low biomass oligotrophic ocean. PMID:22457661

Pico and nanoplankton abundance and carbon stocks along the Brazilian Bight

PubMed Central

Lopes dos Santos, Adriana; Marie, Dominique; Helena Pellizari, Vivian; Pereira Brandini, Frederico; Vaulot, Daniel

2016-01-01

Pico and nanoplankton communities from the Southwest Atlantic Ocean along the Brazilian Bight are poorly described. The hydrography in this region is dominated by a complex system of layered water masses, which includes the warm and oligotrophic Tropical Water (TW), the cold and nutrient rich South Atlantic Central Water (SACW) and the Coastal Water (CW), which have highly variable properties. In order to assess how pico- and nanoplankton communities are distributed in these different water masses, we determined by flow cytometry the abundance of heterotrophic bacteria, Prochlorococcus, Synechococcus and autotrophic pico and nanoeukaryotes along three transects, extending from 23°S to 31°S and 39°W to 49°W. Heterotrophic bacteria (including archaea, maximum of 1.5 × 106 cells mL−1) were most abundant in Coastal and Tropical Water whereas Prochlorococcus was most abundant in open-ocean oligotrophic waters (maximum of 300 × 103 cells mL−1). Synechococcus(up to 81 × 103 cells mL−1), as well as autotrophic pico and nanoeukaryotes seemed to benefit from the influx of nutrient-rich waters near the continental slope. Autotrophic pico and nanoeukaryotes were also abundant in deep chlorophyll maximum (DCM) layers from offshore waters, and their highest abundances were 20 × 103 cells mL−1 and 5 × 103 cells mL−1, respectively. These data are consistent with previous observations in other marine areas where Synechococcus and autotrophic eukaryotes dominate mesotrophic waters, whereas Prochlorococcus dominate in more oligotrophic areas. Regardless of the microbial community structure near the surface, the carbon stock dominance by autotrophic picoeukaryotes near the DCM is possibly linked to vertical mixing of oligotrophic surface waters with the nutrient-rich SACW and their tolerance to lower light levels. PMID:27867760

Assessing the Skill of Chlorophyll Forecasts: Latest Development and Challenges Ahead Using the Case of the Equatorial Pacific

NASA Technical Reports Server (NTRS)

Rousseaux, Cecile S.; Gregg, Watson W.

2018-01-01

Using a global ocean biogeochemical model combined with a forecast of physical oceanic and atmospheric variables from the NASA Global Modeling and Assimilation Office, we assess the skill of a chlorophyll concentrations forecast in the Equatorial Pacific for the period 2012-2015 with a focus on the forecast of the onset of the 2015 El Nino event. Using a series of retrospective 9-month hindcasts, we assess the uncertainties of the forecasted chlorophyll by comparing the monthly total chlorophyll concentration from the forecast with the corresponding monthly ocean chlorophyll data from the Suomi-National Polar-orbiting Partnership Visible Infrared Imaging Radiometer Suite (S-NPP VIIRS) satellite. The forecast was able to reproduce the phasing of the variability in chlorophyll concentration in the Equatorial Pacific, including the beginning of the 2015-2016 El Nino. The anomaly correlation coefficient (ACC) was significant (p less than 0.05) for forecast at 1-month (R=0.33), 8-month (R=0.42) and 9-month (R=0.41) lead times. The root mean square error (RMSE) increased from 0.0399 microgram chl L(exp -1) for the 1-month lead forecast to a maximum of 0.0472 microgram chl L(exp -1) for the 9-month lead forecast indicating that the forecast of the amplitude of chlorophyll concentration variability was getting worse. Forecasts with a 3-month lead time were on average the closest to the S-NPP VIIRS data (23% or 0.033 microgram chl L(exp -1)) while the forecast with a 9-month lead time were the furthest (31% or 0.042 microgram chl L(exp -1)). These results indicate the potential for forecasting chlorophyll concentration in this region but also highlights various deficiencies and suggestions for improvements to the current biogeochemical forecasting system. This system provides an initial basis for future applications including the effects of El Nino events on fisheries and other ocean resources given improvements identified in the analysis of these results.

Vertical distribution of chlorophyll a concentration and phytoplankton community composition from in situ fluorescence profiles: a first database for the global ocean

NASA Astrophysics Data System (ADS)

Sauzède, R.; Lavigne, H.; Claustre, H.; Uitz, J.; Schmechtig, C.; D'Ortenzio, F.; Guinet, C.; Pesant, S.

2015-10-01

In vivo chlorophyll a fluorescence is a proxy of chlorophyll a concentration, and is one of the most frequently measured biogeochemical properties in the ocean. Thousands of profiles are available from historical databases and the integration of fluorescence sensors to autonomous platforms has led to a significant increase of chlorophyll fluorescence profile acquisition. To our knowledge, this important source of environmental data has not yet been included in global analyses. A total of 268 127 chlorophyll fluorescence profiles from several databases as well as published and unpublished individual sources were compiled. Following a robust quality control procedure detailed in the present paper, about 49 000 chlorophyll fluorescence profiles were converted into phytoplankton biomass (i.e., chlorophyll a concentration) and size-based community composition (i.e., microphytoplankton, nanophytoplankton and picophytoplankton), using a method specifically developed to harmonize fluorescence profiles from diverse sources. The data span over 5 decades from 1958 to 2015, including observations from all major oceanic basins and all seasons, and depths ranging from the surface to a median maximum sampling depth of around 700 m. Global maps of chlorophyll a concentration and phytoplankton community composition are presented here for the first time. Monthly climatologies were computed for three of Longhurst's ecological provinces in order to exemplify the potential use of the data product. Original data sets (raw fluorescence profiles) as well as calibrated profiles of phytoplankton biomass and community composition are available on open access at PANGAEA, Data Publisher for Earth and Environmental Science. Raw fluorescence profiles: http://doi.pangaea.de/10.1594/PANGAEA.844212 and Phytoplankton biomass and community composition: http://doi.pangaea.de/10.1594/PANGAEA.844485

Forecasting Ocean Chlorophyll in the Equatorial Pacific.

PubMed

Rousseaux, Cecile S; Gregg, Watson W

2017-01-01

Using a global ocean biogeochemical model combined with a forecast of physical oceanic and atmospheric variables from the NASA Global Modeling and Assimilation Office, we assess the skill of a chlorophyll concentrations forecast in the Equatorial Pacific for the period 2012-2015 with a focus on the forecast of the onset of the 2015 El Niño event. Using a series of retrospective 9-month hindcasts, we assess the uncertainties of the forecasted chlorophyll by comparing the monthly total chlorophyll concentration from the forecast with the corresponding monthly ocean chlorophyll data from the Suomi-National Polar-orbiting Partnership Visible Infrared Imaging Radiometer Suite (S-NPP VIIRS) satellite. The forecast was able to reproduce the phasing of the variability in chlorophyll concentration in the Equatorial Pacific, including the beginning of the 2015-2016 El Niño. The anomaly correlation coefficient (ACC) was significant ( p < 0.05) for forecast at 1-month ( R = 0.33), 8-month ( R = 0.42) and 9-month ( R = 0.41) lead times. The root mean square error (RMSE) increased from 0.0399 μg chl L -1 for the 1-month lead forecast to a maximum of 0.0472 μg chl L -1 for the 9-month lead forecast indicating that the forecast of the amplitude of chlorophyll concentration variability was getting worse. Forecasts with a 3-month lead time were on average the closest to the S-NPP VIIRS data (23% or 0.033 μg chl L -1 ) while the forecast with a 9-month lead time were the furthest (31% or 0.042 μg chl L -1 ). These results indicate the potential for forecasting chlorophyll concentration in this region but also highlights various deficiencies and suggestions for improvements to the current biogeochemical forecasting system. This system provides an initial basis for future applications including the effects of El Niño events on fisheries and other ocean resources given improvements identified in the analysis of these results.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Foltz, Gregory R.; Balaguru, Karthik; Leung, Lai-Yung R.

The impact of tropical cyclones on surface chlorophyll concentration is assessed in the western subtropical North Atlantic Ocean during 1998–2011. Previous studies in this area focused on individual cyclones and gave mixed results regarding the importance of tropical cyclone-induced mixing for changes in surface chlorophyll. Using a more integrated and comprehensive approach that includes quantification of cyclone-induced changes in mixed layer depth, here it is shown that accumulated cyclone energy explains 22% of the interannual variability in seasonally-averaged (June–November) chlorophyll concentration in the western subtropical North Atlantic, after removing the influence of the North Atlantic Oscillation (NAO). The variance explainedmore » by tropical cyclones is thus about 70% of that explained by the NAO, which has well-known impacts in this region. It is therefore likely that tropical cyclones contribute significantly to interannual variations of primary productivity in the western subtropical North Atlantic during the hurricane season.« less

Negative response of photosynthesis to natural and projected high seawater temperatures estimated by pulse amplitude modulation fluorometry in a temperate coral.

PubMed

Caroselli, Erik; Falini, Giuseppe; Goffredo, Stefano; Dubinsky, Zvy; Levy, Oren

2015-01-01

Balanophyllia europaea is a shallow water solitary zooxanthellate coral, endemic to the Mediterranean Sea. Extensive field studies across a latitudinal temperature gradient highlight detrimental effects of rising temperatures on its growth, demography, and skeletal characteristics, suggesting that depression of photosynthesis at high temperatures might cause these negative effects. Here we test this hypothesis by analyzing, by means of pulse amplitude modulation fluorometry, the photosynthetic efficiency of B. europaea specimens exposed in aquaria to the annual range of temperatures experienced in the field (13, 18, and 28°C), and two extreme temperatures expected for 2100 as a consequence of global warming (29 and 32°C). The indicators of photosynthetic performance analyzed (maximum and effective quantum yield) showed that maximum efficiency was reached at 20.0-21.6°C, slightly higher than the annual mean temperature in the field (18°C). Photosynthetic efficiency decreased from 20.0 to 13°C and even more strongly from 21.6 to 32°C. An unusual form of bleaching was observed, with a maximum zooxanthellae density at 18°C that strongly decreased from 18 to 32°C. Chlorophyll a concentration per zooxanthellae cell showed an opposite trend as it was minimal at 18°C and increased from 18 to 32°C. Since the areal chlorophyll concentration is the product of the zooxanthellae density and its cellular content, these trends resulted in a homogeneous chlorophyll concentration per coral surface across temperature treatments. This confirms that B. europaea photosynthesis is progressively depressed at temperatures >21.6°C, supporting previous hypotheses raised by the studies on growth and demography of this species. This study also confirms the threats posed to this species by the ongoing seawater warming.

Acclimation of Haslea ostrearia to light of different spectral qualities - confirmation of 'chromatic adaptation' in diatoms.

PubMed

Mouget, Jean-Luc; Rosa, Philippe; Tremblin, Gérard

2004-07-19

The marine diatom Haslea ostrearia was cultured under light of different qualities, white (WL), blue (BL), green (GL), yellow (YL), red (RL), and far-red (FRL) and at two irradiance levels, low and high (20 and 100 micromolphotonsm(-2)s(-1), respectively). The effects of the different light regimes were studied on growth, pigment content, and photosynthesis, estimated by the modulated fluorescence of chlorophyll, as relative electron transport rate (rETR). For all the light qualities studied, growth rates were higher at high irradiance. Compared to the corresponding WL controls, growth was higher in BL and lower in YL at low irradiance, and lower in YL and GL at high irradiance. Except for YL, almost all the pigment contents of the cells were lower at high irradiance. At low irradiance, cell pigment contents (chlorophyll a and c, fucoxanthin) and pigment ratios (in function of chlorophyll a) were lower in YL, RL, and FRL. Whatever the irradiance level, the maximum PSII quantum efficiency (F(v)/F(m) remained almost constant for WL, BL, and GL. Other fluorescence parameters (photochemical quenching, rETR(max), and alpha, the maximum light utilization coefficient) were lower in GL, YL, RL, and FRL, at low irradiance. Although not statistically significant, BL caused an increase in these fluorescence parameters. These findings are interpreted as evidence that inverse chromatic acclimation occurs in diatoms.

Leaf Optical Properties in Higher Plants: Linking Spectral Characteristics with Plant Stress

NASA Technical Reports Server (NTRS)

Carter, Gregory A.; Knapp, Alan K.

1999-01-01

A number of studies have addressed responses of leaf spectral reflectance, transmittance, or absorptance to physiological stress. Stressors included dehydration, ozone, herbicides, disease, insufficient mycorrhizae and N fertilization, flooding and insects. Species included conifers, grasses, and broadleaved trees. Increased reflectance with maximum responses near 700 nm wavelength occurred in all cases. Varying the chlorophyll content in leaves or pigment extracts can simulate this effect. Thus, common optical responses to stress result from decreases in leaf chlorophyll contents or the capacity of chloroplasts to absorb light. Leaf optic can be quite sensitive to any stressor that alters soil-plant-atmosphere processes.

Synergistic Effects of Bacillus amyloliquefaciens (GB03) and Water Retaining Agent on Drought Tolerance of Perennial Ryegrass

PubMed Central

Su, An-Yu; Niu, Shu-Qi; Liu, Yuan-Zheng; He, Ao-Lei; Zhao, Qi; Li, Meng-Fei; Han, Qing-Qing; Ali Khan, Sardar

2017-01-01

Water retaining agent (WRA) is widely used for soil erosion control and agricultural water saving. Here, we evaluated the effects of the combination of beneficial soil bacterium Bacillus amyloliquefaciens strain GB03 and WRA (the compound is super absorbent hydrogels) on drought tolerance of perennial ryegrass (Lolium perenne L.). Seedlings were subjected to natural drought for maximum 20 days by stopping watering and then rewatered for seven days. Plant survival rate, biomass, photosynthesis, water status and leaf cell membrane integrity were measured. The results showed that under severe drought stress (20-day natural drought), compared to control, GB03, WRA and GB03+WRA all significantly improved shoot fresh weight, dry weight, relative water content (RWC) and chlorophyll content and decreased leaf relative electric conductivity (REC) and leaf malondialdehyde (MDA) content; GB03+WRA significantly enhanced chlorophyll content compared to control and other two treatments. Seven days after rewatering, GB03, WRA and GB03+WRA all significantly enhanced plant survival rate, biomass, RWC and maintained chlorophyll content compared to control; GB03+WRA significantly enhanced plant survival rate, biomass and chlorophyll content compared to control and other two treatments. The results established that GB03 together with water retaining agent promotes ryegrass growth under drought conditions by improving survival rate and maintaining chlorophyll content. PMID:29232909

Synergistic Effects of Bacillus amyloliquefaciens (GB03) and Water Retaining Agent on Drought Tolerance of Perennial Ryegrass.

PubMed

Su, An-Yu; Niu, Shu-Qi; Liu, Yuan-Zheng; He, Ao-Lei; Zhao, Qi; Paré, Paul W; Li, Meng-Fei; Han, Qing-Qing; Ali Khan, Sardar; Zhang, Jin-Lin

2017-12-11

Water retaining agent (WRA) is widely used for soil erosion control and agricultural water saving. Here, we evaluated the effects of the combination of beneficial soil bacterium Bacillus amyloliquefaciens strain GB03 and WRA (the compound is super absorbent hydrogels) on drought tolerance of perennial ryegrass ( Lolium perenne L.). Seedlings were subjected to natural drought for maximum 20 days by stopping watering and then rewatered for seven days. Plant survival rate, biomass, photosynthesis, water status and leaf cell membrane integrity were measured. The results showed that under severe drought stress (20-day natural drought), compared to control, GB03, WRA and GB03+WRA all significantly improved shoot fresh weight, dry weight, relative water content (RWC) and chlorophyll content and decreased leaf relative electric conductivity (REC) and leaf malondialdehyde (MDA) content; GB03+WRA significantly enhanced chlorophyll content compared to control and other two treatments. Seven days after rewatering, GB03, WRA and GB03+WRA all significantly enhanced plant survival rate, biomass, RWC and maintained chlorophyll content compared to control; GB03+WRA significantly enhanced plant survival rate, biomass and chlorophyll content compared to control and other two treatments. The results established that GB03 together with water retaining agent promotes ryegrass growth under drought conditions by improving survival rate and maintaining chlorophyll content.

Fluctuations in coral health of four common inshore reef corals in response to seasonal and anthropogenic changes in water quality.

PubMed

Browne, Nicola K; Tay, Jason K L; Low, Jeffrey; Larson, Ole; Todd, Peter A

2015-04-01

Environmental drivers of coral condition (maximum quantum yield, symbiont density, chlorophyll a content and coral skeletal growth rates) were assessed in the equatorial inshore coastal waters of Singapore, where the amplitude of seasonal variation is low, but anthropogenic influence is relatively high. Water quality variables (sediments, nutrients, trace metals, temperature, light) explained between 52 and 83% of the variation in coral condition, with sediments and light availability as key drivers of foliose corals (Merulina ampliata, Pachyseris speciosa), and temperature exerting a greater influence on a branching coral (Pocillopora damicornis). Seasonal reductions in water quality led to high chlorophyll a concentrations and maximum quantum yields in corals, but low growth rates. These marginal coral communities are potentially vulnerable to climate change, hence, we propose water quality thresholds for coral growth with the aim of mitigating both local and global environmental impacts. Copyright © 2015 Elsevier Ltd. All rights reserved.

Upper ocean response to the passage of two sequential typhoons

NASA Astrophysics Data System (ADS)

Wu, Renhao; Li, Chunyan

2018-02-01

Two sequential typhoons, separated by five days, Chan-hom and Nangka in the summer of 2015, provided a unique opportunity to study the oceanic response and cold wake evolution. The upper ocean response to the passage of these two typhoons was investigated using multi-satellite, Argo float data and HYCOM global model output. The sea surface cooling (SSC) induced by Chan-hom was gradually enhanced along its track when the storm was intensified while moving over the ocean with shallow mixed layer. The location of maximum cooling of sea surface was determined by the storm's translation speed as well as pre-typhoon oceanic conditions. As a fast-moving storm, Chan-hom induced significant SSC on the right side of its track. Localized maximum cooling patches are found over a cyclonic eddy (CE). An analysis of data from Argo floats near the track of Chan-hom demonstrated that the mixed layer temperature (MLT) and mixed layer depth (MLD) had more variabilities on the right side than those on the left side of Chan-hom's track, while mixed layer salinity (MLS) response was different from those of MLT and MLD with an increase in salinity to the right side and a decrease in salinity to the left side of the track. Subsequently, because of the remnant effect of Chan-hom, the strong upwelling induced by Typhoon Nangka, the pre-existing CE as well as a slow translation speed (<2 m s-1) of the storm, the most significant SSC ( 6 °C) was observed over the CE region in the wake of the storm. Further, Nangka experienced a rapid weakening suggesting immediate negative feedback from the intensified SSC occurred in the CE region. After these two typhoons, the CE was enhanced and the sea surface height of eddy core was depressed by 10 cm. It took more than one month for SSC to restore to its pre-typhoon conditions, with the anomalous geostrophic current advection playing an important role in the process. The enhancement of chlorophyll-a concentrations was also noticed at both the CE region and close to Chan-hom's track.

Comparison between fluorimetry and oximetry techniques to measure photosynthesis in the diatom Skeletonema costatum cultivated under simulated seasonal conditions.

PubMed

Lefebvre, Sébastien; Mouget, Jean-Luc; Loret, Pascale; Rosa, Philippe; Tremblin, Gérard

2007-02-01

This study reports comparison of two techniques measuring photosynthesis in the ubiquitous diatom Skeletonema costatum, i.e., the classical oximetry and the recent modulated fluorimetry. Microalgae in semi-continuous cultures were exposed to five different environmental conditions simulating a seasonal effect with co-varying temperature, photoperiod and incident light. Photosynthesis was assessed by gross rate of oxygen evolution (P(B)) and the electron transport rate (ETR) measurements. The two techniques were linearly related within seasonal treatments along the course of the P/E curves. The light saturation intensity parameters (Ek and Ek(ETR)), and the maximum electron transport rate increased significantly with the progression of the season while the maximum light utilization efficiency for ETR (alpha(ETR)) was constant. By contrast, the maximum gross oxygen photosynthetic capacity (Pmax(B)) and the maximum light utilization efficiency for P(B) (alpha(B)) increased from December to May treatment but decreased from May to July treatment. Both techniques showed clear photoacclimation in microalgae with the progression of the season, as illustrated by changes in photosynthetic parameters. The relationship between the two techniques changed when high temperature, photoperiod and incident light were combined, possibly due to an overestimation of the PAR--averaged chlorophyll-specific absorption cross-section. Despite this change, our results illustrate the strong suitability of in vivo chlorophyll fluorimetry to estimate primary production in the field.

Effect of CO2 Concentration on Growth and Biochemical Composition of Newly Isolated Indigenous Microalga Scenedesmus bajacalifornicus BBKLP-07.

PubMed

Patil, Lakkanagouda; Kaliwal, Basappa

2017-05-01

Photosynthetic mitigation of CO 2 through microalgae is gaining great importance due to its higher photosynthetic ability compared to plants, and the biomass can be commercially exploited for various applications. CO 2 fixation capability of the newly isolated freshwater microalgae Scenedesmus bajacalifornicus BBKLP-07 was investigated using a 1-l photobioreactor. The cultivation was carried at varying concentration of CO 2 ranging from 5 to 25%, and the temperature and light intensities were kept constant. A maximum CO 2 fixation rate was observed at 15% CO 2 concentration. Characteristic growth parameters such as biomass productivity, specific growth rate, and maximum biomass yield, and biochemical parameters such as carbohydrate, protein, lipid, chlorophyll, and carotenoid were determined and discussed. It was observed that the effect of CO 2 concentration on growth and biochemical composition was quite significant. The maximum biomass productivity was 0.061 ± 0.0007 g/l/day, and the rate of CO 2 fixation was 0.12 ± 0.002 g/l/day at 15% CO 2 concentration. The carbohydrate and lipid content were maximum at 25% CO 2 with 26.19 and 25.81% dry cell weight whereas protein, chlorophyll, and carotenoid contents were 32.89% dry cell weight, 25.07 μg/ml and 6.15 μg/ml respectively at 15% CO 2 concentration.

Algae Tile Data: 2004-2007, BPA-51; Preliminary Report, October 28, 2008.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Holderman, Charles

Multiple files containing 2004 through 2007 Tile Chlorophyll data for the Kootenai River sites designated as: KR1, KR2, KR3, KR4 (Downriver) and KR6, KR7, KR9, KR9.1, KR10, KR11, KR12, KR13, KR14 (Upriver) were received by SCS. For a complete description of the sites covered, please refer to http://ktoi.scsnetw.com. To maintain consistency with the previous SCS algae reports, all analyses were carried out separately for the Upriver and Downriver categories, as defined in the aforementioned paragraph. The Upriver designation, however, now includes three additional sites, KR11, KR12, and the nutrient addition site, KR9.1. Summary statistics and information on the four responses,more » chlorophyll a, chlorophyll a Accrual Rate, Total Chlorophyll, and Total Chlorophyll Accrual Rate are presented in Print Out 2. Computations were carried out separately for each river position (Upriver and Downriver) and year. For example, the Downriver position in 2004 showed an average Chlorophyll a level of 25.5 mg with a standard deviation of 21.4 and minimum and maximum values of 3.1 and 196 mg, respectively. The Upriver data in 2004 showed a lower overall average chlorophyll a level at 2.23 mg with a lower standard deviation (3.6) and minimum and maximum values of (0.13 and 28.7, respectively). A more comprehensive summary of each variable and position is given in Print Out 3. This lists the information above as well as other summary information such as the variance, standard error, various percentiles and extreme values. Using the 2004 Downriver Chlorophyll a as an example again, the variance of this data was 459.3 and the standard error of the mean was 1.55. The median value or 50th percentile was 21.3, meaning 50% of the data fell above and below this value. It should be noted that this value is somewhat different than the mean of 25.5. This is an indication that the frequency distribution of the data is not symmetrical (skewed). The skewness statistic, listed as part of the first section of each analysis, quantifies this. In a symmetric distribution, such as a Normal distribution, the skewness value would be 0. The tile chlorophyll data, however, shows larger values. Chlorophyll a, in the 2004 Downriver example, has a skewness statistic of 3.54, which is quite high. In the last section of the summary analysis, the stem and leaf plot graphically demonstrates the asymmetry, showing most of the data centered around 25 with a large value at 196. The final plot is referred to as a normal probability plot and graphically compares the data to a theoretical normal distribution. For chlorophyll a, the data (asterisks) deviate substantially from the theoretical normal distribution (diagonal reference line of pluses), indicating that the data is non-normal. Other response variables in both the Downriver and Upriver categories also indicated skewed distributions. Because the sample size and mean comparison procedures below require symmetrical, normally distributed data, each response in the data set was logarithmically transformed. The logarithmic transformation, in this case, can help mitigate skewness problems. The summary statistics for the four transformed responses (log-ChlorA, log-TotChlor, and log-accrual ) are given in Print Out 4. For the 2004 Downriver Chlorophyll a data, the logarithmic transformation reduced the skewness value to -0.36 and produced a more bell-shaped symmetric frequency distribution. Similar improvements are shown for the remaining variables and river categories. Hence, all subsequent analyses given below are based on logarithmic transformations of the original responses.« less

Filtrates and Residues: Chlorophyll Separation and Spectral Identification.

ERIC Educational Resources Information Center

Diehl-Jones, Susan M.

1984-01-01

Describes an experiment in which students become familiar with the organic chemistry extraction process, perform analyses by thin layer and column chromatography, and use the absorption spectrum (obtained from a spectrophotometer) for identification. List of materials needed and procedures used are provided. (JN)

Seasonal Variation of Phytoplankton and Primary Production in the Thames River, Southeastern Connecticut

NASA Astrophysics Data System (ADS)

Wainright, S. C.

2016-02-01

A year-long study was performed to investigate seasonal changes in the phytoplankton biomass and primary production in the Thames River, a salt wedge estuary that empties into Long Island Sound in southeastern CT. Chlorophyll measurements were made on discrete filtered samples collected above and below the 1-3 m deep pycnocline at a 5-meter deep station. Surface chlorophyll concentrations, primarily from diatoms, averaged approx. 2 mg m-3, with maxima (up to 10 mg m-3) during summer months (Jun to Aug) and minima during October through March (as low as 0.3 mg m-3). The lower water layer had nearly the same annual average but a smaller range (0.7-3.3 mg m-3) and a winter/spring bloom (Jan-Apr) that was not seen in surface water. During most of the winter, chlorophyll concentrations were higher in the lower layer. Primary production, as measured by 13C uptake in bottle incubations, averaged 67 mgC m-3 h-1 in surface water [range 0.1 (Jan 2012) to 800 mgC m-3 h-1 (Aug 2011)], and 3 mgC m-3 h-1 [range 0.04 (Jan 2012) to 17 mgC m-3 h-1 (Aug 2011)] in the lower layer. On most occasions, deep water incubated near the surface had a higher primary production rate than surface water incubated at the surface; apparently the light-limited phytoplankton in the lower layer were released from light-limitation during these incubations. During the study period there were over a dozen heavy wind or heavy rain events, including Hurricane Irene in August and a freak Nor'easter snow storm in October 2011. Hurricane Irene was associated with a large decline in phytoplankton biomass and primary production. With significant storms as frequent as the rate of sampling, it is difficult to separate a "storm effect" from a background seasonal pattern. The study reveals that phytoplankton, especially those in the lower layer, are light-limited in the Thames River estuary, and that the effects of significant storm events are superimposed on significant seasonal variation.

Effect of the LHCII pigment-protein complex aggregation on photovoltaic properties of sensitized TiO2 solar cells.

PubMed

Yang, Yiqun; Jankowiak, Ryszard; Lin, Chen; Pawlak, Krzysztof; Reus, Michael; Holzwarth, Alfred R; Li, Jun

2014-10-14

A modified dye-sensitized solar cell consisting of a thin TiO2 barrier layer sensitized with natural trimeric light-harvesting complex II (LHCII) from spinach was used as a biomimetic model to study the effects of LHCII aggregation on the photovoltaic properties. The aggregation of individual trimers induced molecular reorganization, which dramatically increased the photocurrent. The morphology of small- and large-size LHCII aggregates deposited on a surface was confirmed by atomic force microscopy. Enhanced LHCII immobilization was accomplished via electrostatic interaction with amine-functionalized photoanodes. The photocurrent responses of the assembled solar cells under illumination at three characteristic wavelength bands in the UV-Vis absorption spectra of LHCII solutions confirmed that a significant photocurrent was generated by LHCII photosensitizers. The enhanced photocurrent by large aggregated LHCII is shown to correlate with the quenching in the far-red fluorescence deriving from chlorophyll-chlorophyll charge transfer states that are effectively coupled with the TiO2 surface and thus inject electrons into the TiO2 conduction band. The large aggregated LHCII with more chlorophyll-chlorophyll charge transfer states is a much better sensitizer since it injects electrons more efficiently into the conduction band of TiO2 than the small aggregated LHCII mostly consisting of unquenched chlorophyll excited state. The assembled solar cells demonstrated remarkable stability in both aqueous buffer and acetonitrile electrolytes over 30 days.

Bio-optical observations of the 2004 Labrador Sea phytoplankton bloom

NASA Astrophysics Data System (ADS)

Strutton, Peter G.; Martz, Todd R.; Degrandpre, Michael D.; McGillis, Wade R.; Drennan, William M.; Boss, Emmanuel

2011-11-01

A unique time series of moored bio-optical measurements documented the 2004 spring-summer bloom in the southern Labrador Sea. In situ and satellite chlorophyll data show that chlorophyll levels in the 2004 bloom were at the upper end of those typically observed in this region. Satellite chlorophyll and profiling float temperature/salinity data show that the main bloom, which typically peaks in June/July, is often preceded by ephemeral mixed layer shoaling and a lesser, short-lived bloom in May; this was the case in 2004. The particulate backscatter to beam attenuation ratio (bbp[470 nm]/Cp[660 nm]) showed peaks in the relative abundance of small particles at bloom initiation and during the decline of the bloom, while larger particles dominated during the bloom. Chlorophyll/Cp and bbp/chlorophyll were correlated with carbon export and dominated by changes in the pigment per cell associated with lower light levels due to enhanced attenuation of solar radiation during the bloom. An NPZ (nutrients, phytoplankton, zooplankton) model captured the phytoplankton bloom and an early July peak in zooplankton. Moored acoustic Doppler current profiler (ADCP) data showed an additional mid-June peak in zooplankton biomass which was attributed to egg-laying copepods. The data reported here represent one of the few moored time series of Cp, bbp and chlorophyll extending over several months in an open ocean region. Interpretation of data sets such as this will become increasingly important as these deployments become more commonplace via ocean observing systems. Moreover, these data contribute to the understanding of biological-physical coupling in a biogeochemically important, yet poorly studied region.

Bio-physical changes in the coastal ocean triggered by typhoon: A case of Typhoon Meari in summer 2011

NASA Astrophysics Data System (ADS)

Wu, Xiao; Wang, Houjie; Bi, Naishuang; Song, Zhenjie; Zang, Zhengchen; Kineke, Gail C.

2016-12-01

Based on the combination of synchronous satellite and in-situ observations, we here, for the first time, provide the compelling evidence of bio-physical response of coastal environment in the Bohai Sea (China) to the passage of Typhoon Meari over the northern Yellow Sea on June 26, 2011. Strong sustained winds induced a tongue-like intrusion of cool water from the northern Yellow Sea into the Bohai Sea, resulting in significant surface cooling and an anomalous increase in sea surface height along the coast of the western Bohai Sea. This, in return, produced downwelling and transport of the warm and nutrient-rich coastal water from the western coast to the central Bohai Sea, as driven by the barotropic pressure gradient force. In-situ observational data confirmed the cooling of both surface and bottom layers with salinity increase; however, the measured temperature increase by 2-3 °C, concomitant salinity decrease by 0.3 PSU and two-fold increase in chlorophyll-a in the middle layers suggested an influence from coastal downwelling. Ekman transport and typhoon-enhanced mixing redistributed the nutrients and thus resulted in higher chlorophyll-a concentrations in the upper layers.

Benthic response to the sedimentation of particulate organic matter at the BIOTRANS station, 47°N, 20°W

NASA Astrophysics Data System (ADS)

Pfannkuche, O.

The benthic response to the sedimentation of particulate organic matter (POM) was investigated during 1985-1990 at 47°N, 20°W (BIOTRANS station). The first noticeable annual sedimentation of phytodetritus, as indicated by chlorophyll a concentrations in the sediment, occurred as early as late April-early May. Maximum amounts were found in June-July. Two different sedimentation pulses to the sea bed are described that demonstrate interannual variation: the occurrence of salp faecal pellets early in the year 1988 and the massive fall out of a plankton bloom in summer 1986, which deposited approximately 15 mmol C m -2. The benthic reaction to POM pulses was quite diverse. The mega-, macro- and meiobenthos showed no change in biomass, whereas bacterial biomass doubled between March and July. This corresponds to a seasonal maximum of total adenylate biomass. The relative abundance of Foraminifera among the meiobenthos increased during the summer. Benthic activity (ATP, ratio ATP/ETSA), as well as in situ sediment community oxygen consumption rates (SCOC), showed distinct seasonal maxima in July-August of 0.75 mmol C m -2 day -1. Based on SCOC and the carbon demand for growth, a benthic carbon consumption of 0.94 mmol C m -2 day -1 was estimated. This represents about 1.1% of spring bloom primary production and 9.6% of the export flux beneath the 150 m layer, measured during the North Atlantic Bloom Experiment. Bacteria and protozoans colonizing the epibenthic phytodetrital layer were responsible for 60-80% of the seasonal increase in SCOC. The strong reaction of the smaller benthic size groups (bacteria, protozoans) to POM pulses stresses their particular importance for sediment-water interface flux rates.

Light absorption coefficients by phytoplankton pigments, suspended particles and colored dissolved organic matter in the Crimea coastal water (the Black sea) in June 2016

NASA Astrophysics Data System (ADS)

Moiseeva, N.; Churilova, T.; Efimova, T.; Krivenko, O.; Latushkin, A.

2017-11-01

Variability of the bio-optical properties of the Crimean coastal waters in June 2016 has been analyzed. The type of vertical distribution chlorophyll a concentration and phytoplankton light absorption coefficients and spectra shape differed between shallow and deeper water. In the deeper water seasonal stratification divided euphotic zone into layers with different environmental conditions. In the deeper part of the euphotic zone (below the thermocline) phytoplankton absorption spectra had local maximum at 550 nm, which was likely to be associated with high abundance of cyanobacteria (Synechococcus sps.) in the phytoplankton community. The concentration of chlorophyll a specific light absorption coefficient of phytoplankton decreased with depth (especially pronounced in the blue domain of the spectrum). In the shallow water the vertical distributions of all absorption properties were relatively homogeneous due to vertical water mixing. In the shallow water non-algal particles light absorption coefficient and its contribution to total particulate absorption were higher than those in the deeper water. The non-algal particles (NAP) and colored dissolved organic matter (CDOM) light absorption spectra were well described by an exponential function with a slope averaging 0.010 nm-1 (SD = 0.001 nm-1) and 0.022 nm-1 (SD = 0.0060 nm-1), correspondingly. The CDOM absorption at 440 nm and slope coefficient varied significantly across the investigated area, which was possibly associated with the terrestrial influences. The assessment of the contribution of phytoplankton, NAP and CDOM to total light absorption showed that CDOM dominated in the absorption at 440 nm.

Factors affecting the estimate of primary production from space

NASA Technical Reports Server (NTRS)

Balch, W. M.; Byrne, C. F.

1994-01-01

Remote sensing of primary production in the euphotic zone has been based mostly on visible-band and water-leaving radiance measured with the coastal zone color scanner. There are some robust, simple relationships for calculating integral production based on surface measurements, but they also require knowledge for photoadaptive parameters such as maximum photosynthesis which currently cannot be obtained from spave. A 17,000-station data set is used to show that space-based estimates of maximum photosynthesis could improve predictions of psi, the water column light utiliztion index, which is an important term in many primary productivity models. Temperature is also examined as a factor for predicting hydrographic structure and primary production. A simple model is used to relate temperature and maximum photosynthesis; the model incorporates (1) the positive relationship between maximum photosynthesis and temperature and (2) the strongly negative relationship between temperature and nitrate in the ocean (which directly affects maximum growth rates via nitrogen limitation). Since these two factors relate to carbon and nitrogen, 'balanced carbon/nitrogen assimilation' was calculated using the Redfield ratio, It is expected that the relationship between maximum balanced carbon assimilation versus temperature is concave-down, with the peak dependent on nitrate uptake kinetics, temperature-nitrate relationships,a nd the carbon chlorophyll ration. These predictions were compared with the sea truth data. The minimum turnover time for nitrate was also calculated using this approach. Lastly, sea surface temperature gradients were used to predict the slope of isotherms (a proxy for the slope of isopycnals in many waters). Sea truth data show that at size scales of several hundred kilometers, surface temperature gradients can provide information on the slope of isotherms in the top 200 m of the water column. This is directly relevant to the supply of nutrients into the surface mixed layer, which is useful for predicting integral biomass and primary production.

Competition for spectral irradiance between epilimnetic optically active dissolved and suspended matter and phytoplankton in the metalimnion. Consequences for limnology and chemistry.

PubMed

Bracchini, Luca; Dattilo, Arduino Massimo; Falcucci, Margherita; Hull, Vincent; Tognazzi, Antonio; Rossi, Claudio; Loiselle, Steven Arthur

2011-06-01

In deep lakes, water column stratification isolates the surface water from the deeper bottom layers, creating a three dimensional differentiation of the chemical, physical, biological and optical characteristics of the waters. Chromophoric dissolved organic matter (CDOM) and total suspended solids (TSS) play an important role in the attenuation of ultraviolet and photosynthetically active radiation. In the present analysis of spectral irradiance, we show that the wavelength composition of the metalimnetic visible irradiance was influenced by epilimnetic spatial distribution of CDOM. We found a low occurrence of blue-green photons in the metalimnion where epilimnetic concentrations of CDOM are high. In this field study, the spatial variation of the spectral irradiance in the metalimnion correlates with the observed metalimnetic concentrations of chlorophyll a as well as chlorophyll a : chlorophyll b/c ratios. Dissolved oxygen, pH, and nutrients trends suggest that chlorophyll a concentrations were representative of the phytoplankton biomass and primary production. Thus, metalimnetic changes of spectral irradiance may have a direct impact on primary production and an indirect effect on the spatial trends of pH, dissolved oxygen, and inorganic nutrients in the metalimnion.

Chlorophyll-a thin layers in the Magellan fjord system: The role of the water column stratification

NASA Astrophysics Data System (ADS)

Ríos, Francisco; Kilian, Rolf; Mutschke, Erika

2016-08-01

Fjord systems represent hotspots of primary productivity and organic carbon burial. However, the factors which control the primary production in mid-latitude fjords are poorly understood. In this context, results from the first fine-scale measurements of bio-oceanographic features in the water column of fjords associated with the Strait of Magellan are presented. A submersible fluorescence probe (FP) was used to measure the Chlorophyll-a (Chl-a) concentration in situ, along with conductivity, temperature, hydrostatic pressure (depth) and dissolved oxygen (CTD-O2) of the water column. The Austral spring results of 14 FP-CTD-O2 profiles were used to define the vertical and horizontal patches of the fluorescent pigment distribution and their spatial relations with respect to the observed hydrographic features. Three zones with distinct water structures were defined. In all zones, the 'brown' spectral group (diatoms and dinoflagellates) predominated accounting for >80 wt% of the phytoplankton community. Thin layers with high Chl-a concentration were detected in 50% of the profiles. These layers harbored a substantial amount (30-65 wt%) of the phytoplankton biomass. Stratification was positively correlated to the occurrence of Chl-a thin layers. In stable and highly stratified water columns the integrated Chl-a concentration was higher and frequently located within thin layers whereas well mixed water columns displayed lower values and more homogeneous vertical distribution of Chl-a. These results indicate that mixing/stability processes are important factors accounting to the vertical distribution of Chl-a in Magellan fjords.

Off-Nadir Hyperspectral Sensing for Estimation of Vertical Profile of Leaf Chlorophyll Content within Wheat Canopies.

PubMed

Kong, Weiping; Huang, Wenjiang; Casa, Raffaele; Zhou, Xianfeng; Ye, Huichun; Dong, Yingying

2017-11-23

Monitoring the vertical profile of leaf chlorophyll (Chl) content within winter wheat canopies is of significant importance for revealing the real nutritional status of the crop. Information on the vertical profile of Chl content is not accessible to nadir-viewing remote or proximal sensing. Off-nadir or multi-angle sensing would provide effective means to detect leaf Chl content in different vertical layers. However, adequate information on the selection of sensitive spectral bands and spectral index formulas for vertical leaf Chl content estimation is not yet available. In this study, all possible two-band and three-band combinations over spectral bands in normalized difference vegetation index (NDVI)-, simple ratio (SR)- and chlorophyll index (CI)-like types of indices at different viewing angles were calculated and assessed for their capability of estimating leaf Chl for three vertical layers of wheat canopies. The vertical profiles of Chl showed top-down declining trends and the patterns of band combinations sensitive to leaf Chl content varied among different vertical layers. Results indicated that the combinations of green band (520 nm) with NIR bands were efficient in estimating upper leaf Chl content, whereas the red edge (695 nm) paired with NIR bands were dominant in quantifying leaf Chl in the lower layers. Correlations between published spectral indices and all NDVI-, SR- and CI-like types of indices and vertical distribution of Chl content showed that reflectance measured from 50°, 30° and 20° backscattering viewing angles were the most promising to obtain information on leaf Chl in the upper-, middle-, and bottom-layer, respectively. Three types of optimized spectral indices improved the accuracy for vertical leaf Chl content estimation. The optimized three-band CI-like index performed the best in the estimation of vertical distribution of leaf Chl content, with R² of 0.84-0.69, and RMSE of 5.37-5.56 µg/cm² from the top to the bottom layers, while the optimized SR-like index was recommended for the bottom Chl estimation due to its simple and universal form. We suggest that it is necessary to take into account the penetration characteristic of the light inside the canopy for different Chl absorption regions of the spectrum and the formula used to derive spectral index when estimating the vertical profile of leaf Chl content using off-nadir hyperspectral data.

Seasonal dynamics of surface chlorophyll concentration and sea surface temperature, as indicator of hydrological structure of the ocean (by satellite data)

NASA Astrophysics Data System (ADS)

Shevyrnogov, Anatoly; Vysotskaya, Galina

Continuous monitoring of phytopigment concentrations and sea surface temperature in the ocean by space-borne methods makes possible to estimate ecological condition of biocenoses in critical areas. Unlike land vegetation, hydrological processes largely determine phytoplank-ton dynamics, which may be either recurrent or random. The types of chlorophyll concentration dynamics and sea surface temperature can manifest as zones quasistationary by seasonal dynamics, quasistationary areas (QSA). In the papers of the authors (A. Shevyrnogov, G. Vysotskaya, E. Shevyrnogov, A study of the stationary and the anomalous in the ocean surface chlorophyll distribution by satellite data. International Journal of Remote Sensing, Vol. 25, No.7-8, pp. 1383-1387, April 2004 & A. P. Shevyrnogov, G. S. Vysotskaya, J. I. Gitelson, Quasistationary areas of chlorophyll concentra-tion in the world ocean as observed satellite data Advances in Space Research, Volume 18, Issue 7, Pages 129-132, 1996) existence of zones, which are quasi-stationary with similar seasonal dynamics of chlorophyll concentration at surface layer of ocean, was shown. Results were obtained on the base of processing of time series of satellite images SeaWiFS. It was shown that fronts and frontal zones coincide with dividing lines between quasi-stationary are-as, especially in areas of large oceanic streams. To study the dynamics of the ocean for the period from 1985 through 2012 we used data on the temperature of the surface layer of the ocean and chlorophyll concentration (AVHRR, SeaWiFS and MODIS). Biota of surface oceanic layer is more stable in comparison with quickly changing surface tem-perature. It gives a possibility to circumvent influence of high-frequency component (for exam-ple, a diurnal cycle) in investigation of dynamics of spatial distribution of surface streams. In addition, an analyses of nonstable ocean productivity phenomena, stood out time series of satellite images, showed existence of areas with different types of instability in the all Global ocean. They are observed as adjacent nonstationary zones of different size, which are associ-ated by different ways with known oceanic phenomena. It is evident that dynamics of a spatial distribution of biological productivity can give an additional knowledge of complicated picture of surface oceanic layer hydrology. In this study we demonstrate different origin of appearance of quasistationary zones in the ocean. We can see that the border between quasi¬stationary zones is an indicator of the front between the Labrador Current and Gulfstream, other example of revealed pheno¬menon is a qua-sistationary area around of the British Isles that correlates with the relief of the oceanic bottom. Considering that the QSA maps are calculated almost for all surface of the Global ocean, not all QSA can be explained especially of small size. Although some small QSA are interesting. Also local QSA near estuaries of large rivers and large industrial centers, that can be result of a human impact. In sum satellite data is a powerful instrument for investigation of dynamic oceanic processes, their stability and unstability. The result of such study can be used for monitoring of long-term changes and their correlation of with climate dynamics.

[Semi-analysis algorithm to retrieve pigment concentrations in the red tide area of the East China Sea].

PubMed

Qiu, Zhong-Feng; Xi, Hong-Yan; He, Yi-Jun; Chen, Jay-Chung; Jian, Wei-Jun

2006-08-01

For the purpose of detecting and forecasting research of red tides to reduce the loss, a semi-analytic algorithm to retrieve chlorophyll-a concentrations was established in the area where red tides often brought out, according to the data collected during the red tides cruise in the East China Sea in April 2002. In the algorithm, empirical equations were made based on the coefficients from the in-situ data, including the optical properties of the research area. The in-situ data were used to validate the algorithm. The discrepancy of chlorophyll-a absorption coefficients and concentrations are mainly located in the region of 30%. The root mean deviation of the chlorophyll-a concentrations between the observed and the calculated is 0.24, the maximum relative deviation 40.93%, the mean relative deviation 18.83% and the correlation coefficient 0.83. The results show that the precision of the algorithm is high and the algorithm is fit for the research area.

Enhancement of phytoplankton chlorophyll by submesoscale frontal dynamics in the North Pacific Subtropical Gyre.

PubMed

Liu, Xiao; Levine, Naomi M

2016-02-28

Subtropical gyres contribute significantly to global ocean productivity. As the climate warms, the strength of these gyres as a biological carbon pump is predicted to diminish due to increased stratification and depleted surface nutrients. We present results suggesting that the impact of submesoscale physics on phytoplankton in the oligotrophic ocean is substantial and may either compensate or exacerbate future changes in carbon cycling. A new statistical tool was developed to quantify surface patchiness from sea surface temperatures. Chlorophyll concentrations in the North Pacific Subtropical Gyre were shown to be enhanced by submesoscale frontal dynamics with an average increase of 38% (maximum of 83%) during late winter. The magnitude of this enhancement is comparable to the observed decline in chlorophyll due to a warming of ~1.1°C. These results highlight the need for an improved understanding of fine-scale physical variability in order to predict the response of marine ecosystems to projected climate changes.

Enhancement of phytoplankton chlorophyll by submesoscale frontal dynamics in the North Pacific Subtropical Gyre

NASA Astrophysics Data System (ADS)

Liu, Xiao; Levine, Naomi M.

2016-02-01

Subtropical gyres contribute significantly to global ocean productivity. As the climate warms, the strength of these gyres as a biological carbon pump is predicted to diminish due to increased stratification and depleted surface nutrients. We present results suggesting that the impact of submesoscale physics on phytoplankton in the oligotrophic ocean is substantial and may either compensate or exacerbate future changes in carbon cycling. A new statistical tool was developed to quantify surface patchiness from sea surface temperatures. Chlorophyll concentrations in the North Pacific Subtropical Gyre were shown to be enhanced by submesoscale frontal dynamics with an average increase of 38% (maximum of 83%) during late winter. The magnitude of this enhancement is comparable to the observed decline in chlorophyll due to a warming of ~1.1°C. These results highlight the need for an improved understanding of fine-scale physical variability in order to predict the response of marine ecosystems to projected climate changes.

Biological consequences of a recurrent eddy off Point Conception, California

NASA Technical Reports Server (NTRS)

Haury, Loren R.; Simpson, James J.; Pelaez, Jose; Wisenhahn, David; Koblinsky, Chester J.

1986-01-01

The biological effects on three different time scales (100-day mesoscale, annual, and several-year) of a mesoscale anticyclonic eddy consistently found in shipboard surveys and satellite-sensed data several hundred kilometers southwest of Point Conception, CA, are described. A detailed shipboard study of the eddy in January 1981 found a complex system of fronts in surface chlorophyll at the northern edge of the eddy; microplankton and zooplankton distributions were strongly affected by entrainment processes at the surface and, apparently, at depth. Concurrent satellite coastal zone color scanner ocean color images show agreement with the general surface characteristics of the eddy chlorophyll field but do not reflect features deeper than about 25 m, including the contribution of the deep chlorophyll maximum to the integrated chlorophyll values. Satellite data for the period October 1980 through October 1981 and shipboard data from California Cooperative Oceanic Fisheries Investigations (CalCOFI) for December 1980 to July 1981 show the continued presence of the eddy in the sea surface temperature and color field and in the distributions of surface chlorophyll and zooplankton displacement volume. A review of the CalCOFI survey results from 1949 to the present time demonstrates the recurrent nature of the eddy system on a year-to-year basis. The eddy system appears to have a significant effect on the distribution of both oceanic and nearshore organisms. Offshore transport of coastal species occurs in the form of large entrained plumes or filaments.

Enhancement of lipase catalyzed-fatty acid methyl esters production from waste activated bleaching earth by nullification of lipase inhibitors.

PubMed

Dwiarti, Lies; Ali, Ehsan; Park, Enoch Y

2010-01-01

This study sought to identify inhibitory factors of lipase catalyzed-fatty acid methyl esters (FAME) production from waste activated bleaching earth (wABE). During the vegetable oil refinery process, activated bleaching earth (ABE) is used for removing the impure compounds, but adsorbs vegetable oil up to 35-40% as on a weight basis, and then the wABE is discarded as waste material. The impurities were extracted from the wABE with methanol and evaluated by infra-red (IR) spectroscopy, which revealed that some were chlorophyll-plant pigments. The chlorophylls inhibited the lipase during FAME conversion from wABE. The inhibition by a mixture of chlorophyll a and b was found to be competitive. The inhibition of the enzymatic hydrolysis of waste vegetable oil contained in wABE by chlorophyll a alone was competitive, while the inhibition by chlorophyll b alone was non-competitive. Furthermore, the addition of a small amount of alkali nullified this inhibitory effect and accelerated the FAME production rate. When 0.9% KOH (w/w wABE) was added to the transesterification reaction with only 0.05% lipase (w/w wABE), the maximum FAME production rate improved 120-fold, as compared to that without the addition of KOH. The alkali-combined lipase significantly enhanced the FAME production rate from wABE, in spite of the presence of the plant pigments, and even when a lower amount of lipase was used as a catalyst.

An Empirical Approach to Ocean Color Data: Reducing Bias and the Need for Post-Launch Radiometric Re-Calibration

NASA Technical Reports Server (NTRS)

Gregg, Watson W.; Casey, Nancy W.; O'Reilly, John E.; Esaias, Wayne E.

2009-01-01

A new empirical approach is developed for ocean color remote sensing. Called the Empirical Satellite Radiance-In situ Data (ESRID) algorithm, the approach uses relationships between satellite water-leaving radiances and in situ data after full processing, i.e., at Level-3, to improve estimates of surface variables while relaxing requirements on post-launch radiometric re-calibration. The approach is evaluated using SeaWiFS chlorophyll, which is the longest time series of the most widely used ocean color geophysical product. The results suggest that ESRID 1) drastically reduces the bias of ocean chlorophyll, most impressively in coastal regions, 2) modestly improves the uncertainty, and 3) reduces the sensitivity of global annual median chlorophyll to changes in radiometric re-calibration. Simulated calibration errors of 1% or less produce small changes in global median chlorophyll (less than 2.7%). In contrast, the standard NASA algorithm set is highly sensitive to radiometric calibration: similar 1% calibration errors produce changes in global median chlorophyll up to nearly 25%. We show that 0.1% radiometric calibration error (about 1% in water-leaving radiance) is needed to prevent radiometric calibration errors from changing global annual median chlorophyll more than the maximum interannual variability observed in the SeaWiFS 9-year record (+/- 3%), using the standard method. This is much more stringent than the goal for SeaWiFS of 5% uncertainty for water leaving radiance. The results suggest ocean color programs might consider less emphasis of expensive efforts to improve post-launch radiometric re-calibration in favor of increased efforts to characterize in situ observations of ocean surface geophysical products. Although the results here are focused on chlorophyll, in principle the approach described by ESRID can be applied to any surface variable potentially observable by visible remote sensing.

Using a Microscale Approach to Rapidly Separate and Characterize Three Photosynthetic Pigment Species from Fern

ERIC Educational Resources Information Center

Ayudhya, Theppawut Israsena Na; Posey, Frederick T.; Tyus, Jessica C.; Dingra, Nin N.

2015-01-01

A rapid separation of three photosynthetic pigments (chlorophyll "a" and "b" and xanthophyll) from fern ("Polystichum acrostichoides") is described using microscale solvent extraction and traditional thin layer chromatography that minimizes use of harmful chemicals and lengthy procedures. The experiment introduces…

Effects of ventilation and sucrose concentrations on the growth and plantlet anatomy of micropropagated persian walnut plants

USDA-ARS?s Scientific Manuscript database

Plantlets grown in conventional tissue culture systems usually encounter physiological and anatomical abnormalities including inability to photosynthesize, low chlorophyll content, open stomata, lack of a cuticle layer in the leaf, abnormal xylem parenchyma etc. Photoautotrophic and photomixotrophic...

Recovery of photosynthesis in 1-year-old needles of unfertilized and fertilized Norway spruce (Picea abies (L.) Karst.) during spring.

PubMed

Strand, M; Lundmark, T

1995-03-01

Photosynthetic O(2) evolution and chlorophyll a fluorescence were measured in 1-year-old needles of unfertilized and fertilized trees of Norway spruce (Picea abies (L.) Karst.) during recovery of photosynthesis from winter inhibition in northern Sweden. Measurements were made under laboratory conditions at 20 degrees C. In general, the CO(2)-saturated rate of O(2) evolution was higher in needles of fertilized trees than in needles of unfertilized trees over a wide range of incident photon flux densities. Furthermore, the maximum photochemical efficiency of photosystem (PS) II, as indicated by the ratio of variable to maximum fluorescence (F(V)/F(M)) was higher in needles of fertilized trees than in needles of unfertilized trees. The largest differences in F(V)/F(M) between the two treatments occurred before the main recovery of photosynthesis from winter inhibition in late May. The rate of O(2) evolution was higher in needles of north-facing branches than in needles of south-facing branches in the middle of May. Simultaneous measurements of O(2) exchange and chlorophyll fluorescence indicated that differences in the rate of O(2) evolution between the two treatments were paralleled by differences in the rate of PS II electron transport determined by chlorophyll fluorescence. We suggest that, during recovery of photosynthesis from winter inhibition, the balance between carbon assimilation and PS II electron transport was maintained largely by adjustments in the nonphotochemical dissipation of excitation energy within PS II.

Distribution of Arctic and Pacific copepods and their habitat in the northern Bering Sea and Chukchi Sea

NASA Astrophysics Data System (ADS)

Sasaki, H.; Matsuno, K.; Fujiwara, A.; Onuka, M.; Yamaguchi, A.; Ueno, H.; Watanuki, Y.; Kikuchi, T.

2015-11-01

The advection of warm Pacific water and the reduction of sea-ice extent in the western Arctic Ocean may influence the abundance and distribution of copepods, i.e., a key component in food webs. To understand the factors affecting abundance of copepods in the northern Bering Sea and Chukchi Sea, we constructed habitat models explaining the spatial patterns of the large and small Arctic copepods and the Pacific copepods, separately, using generalized additive models. Copepods were sampled by NORPAC net. Vertical profiles of density, temperature and salinity in the seawater were measured using CTD, and concentration of chlorophyll a in seawater was measured with a fluorometer. The timing of sea-ice retreat was determined using the satellite image. To quantify the structure of water masses, the magnitude of pycnocline and averaged density, temperature and salinity in upper and bottom layers were scored along three axes using principal component analysis (PCA). The structures of water masses indexed by the scores of PCAs were selected as explanatory variables in the best models. Large Arctic copepods were abundant in the water mass with high salinity water in bottom layer or with cold/low salinity water in upper layer and cold/high salinity water in bottom layer, and small Arctic copepods were abundant in the water mass with warm/saline water in upper layer and cold/high salinity water in bottom layers, while Pacific copepods were abundant in the water mass with warm/saline in upper layer and cold/high salinity water in bottom layer. All copepod groups were abundant in areas with deeper depth. Although chlorophyll a in upper and bottom layers were selected as explanatory variables in the best models, apparent trends were not observed. All copepod groups were abundant where the sea-ice retreated at earlier timing. Our study might indicate potential positive effects of the reduction of sea-ice extent on the distribution of all groups of copepods in the Arctic Ocean.

Impacts of Organic Macromolecules, Chlorophyll and Soot on Arctic Sea Ice

NASA Astrophysics Data System (ADS)

Ogunro, O. O.; Wingenter, O. W.; Elliott, S.; Flanner, M.; Dubey, M. K.

2014-12-01

Recent intensification of Arctic amplification can be strongly connected to positive feedback relating black carbon deposition to sea ice surface albedo. In addition to soot deposition on the ice and snow pack, ice algal chlorophyll is likely to compete as an absorber and redistributor of energy. Hence, solar radiation absorption by chlorophyll and some components of organic macromolecules in/under the ice column is currently being examined to determine the level of influence on predicted rate of ice loss. High amounts of organic macromolecules and chlorophyll are produced in global sea ice by the bottom microbial community and also in vertically distributed layers where substantial biological activities take place. Brine channeling in columnar ice can allow for upward flow of nutrients which leads to greater primary production in the presence of moderate light. Modeling of the sea-ice processes in tandem with experiments and field observations promises rapid progress in enhancing Arctic ice predictions. We are designing and conducting global climate model experiments to determine the impact of organic macromolecules and chlorophyll on Arctic sea ice. Influences on brine network permeability and radiation/albedo will be considered in this exercise. Absorption by anthropogenic materials such as soot and black carbon will be compared with that of natural pigments. We will indicate areas of soot and biological absorption dominance in the sense of single scattering, then couple into a full radiation transfer scheme to attribute the various contributions to polar climate change amplification. The work prepares us to study more traditional issues such as chlorophyll warming of the pack periphery and chemical effects of the flow of organics from ice internal communities. The experiments started in the Arctic will broaden to include Antarctic sea ice and shelves. Results from the Arctic simulations will be presented.

Biochemical changes in some deciduous tree species around Talcher thermal power station, Odisha, India.

PubMed

Nayak, Rekha; Biswal, Debasis; Sett, Rupnarayan

2013-05-01

The present study was conducted to evaluate biochemical traits in leaves to assess the air pollution impact on plants caused by thermal power plant emissions. Ten species of deciduous trees were selected from study sites in different seasons. pH, chlorophyll, phenols, total soluble sugar content and proline content in fresh leaf was analyzed. The leaf wash pH content reveals moderately acidic (4.5-5.0) to highly acidic (3.5-4.5) range. Significant differences (p < 0.01) were observed in chlorophyll content according to the seasons and sites. Maximum reduction in chlorophyll was noticed at 2.5 km and 5.0 km west from the power plant. Greater reduction in chloropohyll 'b' than chlorophyll 'a' was noticed. An increase in total soluble sugars and phenols was observed at sites closer to thermal power plant in comparison to control. Highest concentration of total phenols was found in summer season in Dalbergia sissoo (1.52%), Butea monosperma (1.12%), Mangifera indica (1.2%), Tectona grandis (1.26%) and Acacia leucophloea (1.16%) at 2.5 km north from the source. Highest concentration of soluble sugar was found in Dalbergia sissoo (7.75%) during winter season. There was about 10-20 fold increase in proline content of leaves in comparison to the control.

The vertical attenuation of light in Charlotte Harbor, a shallow, subtropical estuary, south-western Florida

USGS Publications Warehouse

McPherson, B.F.; Miller, R.L.

1987-01-01

The relative contribution of different components to the attenuation of photosynthetically active radiation was determined in the Charlotte Harbor estuarine system based on laboratory and in situ measurements. Agreement between laboratory and in situ measurements of the attenuation coefficient (kt) was good (r2 = 0??92). For all in situ measurements (n = 100), suspended, non-chlorophyll matter accounted for an average of 72% of kt, dissolved matter accounted for 21%, suspended chlorophyll for 4%, and water for the remaining 3%. For individual determinations, suspended non-chlorophyll matter, dissolved matter, suspended chlorophyll, and water, each accounted for as much as 99%, 79%, 21%, and 18% of kt. Attenuation by suspended matter was greatest near the mouth of the northern tidal rivers and was variable over the rest of the estuarine system. Attenuation by dissolved matter was greatest in the brackish tidal rivers and decreased with increasing salinity. Attenuation due to dissolved matter was positively correlated with water color. The source of the color was basin runoff. Wavelength transmittance changed along the salinity gradient. Maximum transmittance shifted from 500 to 600 nm in gulf waters to 650 to 700 nm in colored, brackish waters. Dissolved matter was primarily responsible for the large attenuation at short wavelengths (400-500 nm). ?? 1987.

Reproductive patterns in demersal crustaceans from the upper boundary of the OMZ off north-central Chile

NASA Astrophysics Data System (ADS)

Gallardo, María de los Ángeles; González López, Andrés E.; Ramos, Marcel; Mujica, Armando; Muñoz, Praxedes; Sellanes, Javier; Yannicelli, Beatriz

2017-06-01

Pleuroncodes monodon (Crustacea: Munididae) supports one of the main trawling fisheries over the continental shelf off Chile between 25°S and 37°S within the upper boundary of the oxygen minimum zone (OMZ). Although the reproductive cycle of P. monodon has been described, the relationship between this key biological process and the variability of the OMZ has not been comprehensibly addressed neither for P. monodon nor for other OMZ resident species. In this study a set of 14 quasi-monthly oceanographic cruises carried out between June 2010 and November 2011 were conducted over the continental shelf off Coquimbo (30°S) to investigate the temporal variability of: i) dissolved oxygen concentration, temperature and chlorophyll-a at relevant depths ii) the presence and proportion of occurrence of P. monodon ovigerous females and juveniles from benthic trawls; iii) the presence of different stage larvae in the plankton, and iv) similar biological data for other species from the OMZ and shallower depths crustaceans. During summer months oxygen levels and bottom temperature were lower than in winter, while chlorophyll-a concentration was maximum in summer coinciding with an active (but not maximum) upwelling season. P. monodon maximum egg carrying occurred in winter during periods of increased oxygenation. Egg carrying females were never found at depths where oxygen concentration was below 0.5 ml L-1, while over 50% of the autumn and spring cohorts of juveniles occurred at oxygen concentrations below that level. The depth range occupied by ovigerous females was more restricted than the rest of the population and their depth of occurrence followed the variability of the upper OMZ. The larval release period of OMZ resident species extends over late winter and spring, and its main peak precedes that of coastal species (spring) and the spring-summer chlorophyll-a maximum. We propose that for OMZ resident species, brood carrying during warmer and more oxygenated conditions in the adult benthic environment, might favor embryonic development, so OMZ seasonal variability could be acting as a selective pressure to synchronize reproductive periods.

Spectral analysis of coniferous foliage and possible links to soil chemistry: are spectral chlorophyll indices related to forest floor dissolved organic C and N?

PubMed

Albrechtova, Jana; Seidl, Zdenek; Aitkenhead-Peterson, Jacqueline; Lhotáková, Zuzana; Rock, Barrett N; Alexander, Jess E; Malenovský, Zbynek; McDowell, William H

2008-10-15

Dissolved organic matter in soils can be predicted from forest floor C:N ratio, which in turn is related to foliar chemistry. Little is known about the linkages between foliar constituents such as chlorophylls, lignin, and cellulose and the concentrations of water-extractable forest floor dissolved organic carbon and dissolved organic nitrogen. Lignin and cellulose are not mobile in foliage and thus may be indicative of growing conditions during prior years, while chlorophylls respond more rapidly to the current physiological status of a tree and reflect nutrient availability. The aim of this study was to examine potential links among spectral foliar data, and the organic C and N of forest soils. Two coniferous species (red spruce and balsam fir) were studied in the White Mountains of New Hampshire, USA. Six trees of each species were sampled at 5 watersheds (2 in the Hubbard Brook Experimental Forest, 3 in the Bartlett Experimental Forest). We hypothesized that in a coniferous forest, chemistry of old foliage would better predict the chemical composition of the forest floor litter layer than younger foliage, which is the more physiologically active and the most likely to be captured by remote sensing of the canopy. Contrary to our expectations, chlorophyll concentration of young needles proved to be most tightly linked to soil properties, in particular water-extractable dissolved organic carbon. Spectral indices related to the chlorophyll content of needles could be used to predict variation in forest floor dissolved organic carbon and dissolved organic nitrogen. Strong correlations were found between optical spectral indices based on chlorophyll absorption and forest floor dissolved organic carbon, with higher foliage chlorophyll content corresponding to lower forest floor dissolved organic carbon. The mechanisms behind these correlations are uncertain and need further investigation. However, the direction of the linkage from soil to tree via nutrient availability is hypothesized based on negative correlations found between foliar N and forest floor dissolved organic carbon.

Growth, ammonium metabolism, and photosynthetic properties of Ulva australis (Chlorophyta) under decreasing pH and ammonium enrichment

PubMed Central

Fernandez, Pamela A.; Leal, Pablo P.; Noisette, Fanny; McGraw, Christina M.; Revill, Andrew T.; Hurd, Catriona L.; Kübler, Janet E.

2017-01-01

The responses of macroalgae to ocean acidification could be altered by availability of macronutrients, such as ammonium (NH4+). This study determined how the opportunistic macroalga, Ulva australis responded to simultaneous changes in decreasing pH and NH4+ enrichment. This was investigated in a week-long growth experiment across a range of predicted future pHs with ambient and enriched NH4+ treatments followed by measurements of relative growth rates (RGR), NH4+ uptake rates and pools, total chlorophyll, and tissue carbon and nitrogen content. Rapid light curves (RLCs) were used to measure the maximum relative electron transport rate (rETRmax) and maximum quantum yield of photosystem II (PSII) photochemistry (Fv/Fm). Photosynthetic capacity was derived from the RLCs and included the efficiency of light harvesting (α), slope of photoinhibition (β), and the light saturation point (Ek). The results showed that NH4+ enrichment did not modify the effects of pH on RGRs, NH4+ uptake rates and pools, total chlorophyll, rETRmax, α, β, Fv/Fm, tissue C and N, and the C:N ratio. However, Ek was differentially affected by pH under different NH4+ treatments. Ek increased with decreasing pH in the ambient NH4+ treatment, but not in the enriched NH4+ treatment. NH4+ enrichment increased RGRs, NH4+ pools, total chlorophyll, rETRmax, α, β, Fv/Fm, and tissue N, and decreased NH4+ uptake rates and the C:N ratio. Decreased pH increased total chlorophyll content, rETRmax, Fv/Fm, and tissue N content, and decreased the C:N ratio. Therefore, the results indicate that U. australis growth is increased with NH4+ enrichment and not with decreasing pH. While decreasing pH influenced the carbon and nitrogen metabolisms of U. australis, it did not result in changes in growth. PMID:29176815

Abundance of the iron containing biomolecule, heme b, during the progression of a spring phytoplankton bloom in a mesocosm experiment

PubMed Central

Bellworthy, Jessica; Esposito, Mario; Achterberg, Eric P.

2017-01-01

Concentrations of heme b were determined in a mesocosm experiment situated in Gullmar Fjord off Sweden. The mesocosm experiment lasted for ca. one hundred days and was characterised by the growth of a primary nutrient replete and a secondary nutrient deplete phytoplankton bloom. Heme b varied between 40 ± 10 pmol L-1 in the prebloom period up to a maximum of 700 ± 400 pmol L-1 just prior to the time of the primary chlorophyll a maximum. Thereafter, heme b concentrations decreased again to an average of 120 ± 60 pmol L-1. When normalised to total particulate carbon, heme b was most abundant during the initiation of the nutrient replete spring bloom, when ratios reached 52 ± 24 μmol mol-1; ten times higher than values observed both pre and post the primary bloom. Concentrations of heme b correlated with those of chlorophyll a. Nevertheless, differences were observed in the relative concentrations of the two parameters, with heme b concentrations increasing relative to chlorophyll a during the growth of the primary bloom, decreasing over the period of the secondary bloom and increasing again through the latter period of the experiment. Heme b abundance was therefore influenced by nutrient concentrations and also likely by changing community composition. In half of the mesocosms, pCO2 was elevated and maintained at ca.1000 μatm, however we observed no significant differences between heme b in plus or ambient pCO2 mesocosms, either in absolute terms, or relative to total particulate carbon and chlorophyll a. The results obtained in this study contribute to our understanding of the distribution of this significant component of the biogenic iron pool, and provide an iron replete coastal water end member that aids the interpretation of the distributions of heme b in more iron deplete open ocean waters. PMID:28426768

Cost-effective water quality assessment through the integration of monitoring data and modeling results

NASA Astrophysics Data System (ADS)

Lobuglio, Joseph N.; Characklis, Gregory W.; Serre, Marc L.

2007-03-01

Sparse monitoring data and error inherent in water quality models make the identification of waters not meeting regulatory standards uncertain. Additional monitoring can be implemented to reduce this uncertainty, but it is often expensive. These costs are currently a major concern, since developing total maximum daily loads, as mandated by the Clean Water Act, will require assessing tens of thousands of water bodies across the United States. This work uses the Bayesian maximum entropy (BME) method of modern geostatistics to integrate water quality monitoring data together with model predictions to provide improved estimates of water quality in a cost-effective manner. This information includes estimates of uncertainty and can be used to aid probabilistic-based decisions concerning the status of a water (i.e., impaired or not impaired) and the level of monitoring needed to characterize the water for regulatory purposes. This approach is applied to the Catawba River reservoir system in western North Carolina as a means of estimating seasonal chlorophyll a concentration. Mean concentration and confidence intervals for chlorophyll a are estimated for 66 reservoir segments over an 11-year period (726 values) based on 219 measured seasonal averages and 54 model predictions. Although the model predictions had a high degree of uncertainty, integration of modeling results via BME methods reduced the uncertainty associated with chlorophyll estimates compared with estimates made solely with information from monitoring efforts. Probabilistic predictions of future chlorophyll levels on one reservoir are used to illustrate the cost savings that can be achieved by less extensive and rigorous monitoring methods within the BME framework. While BME methods have been applied in several environmental contexts, employing these methods as a means of integrating monitoring and modeling results, as well as application of this approach to the assessment of surface water monitoring networks, represent unexplored areas of research.

Flux of particulate matter through copepods in the Northeast water polynya

NASA Astrophysics Data System (ADS)

Daly, Kendra L.

1997-01-01

Particulate organic carbon (POC) and nitrogen (PON) production by large calanoid copepods was investigated on the northeast Greenland shelf during August 1992 and May to August 1993. Both Calanus hyperboreus and C. glacialis females, when suspended in seawater collected from the chlorophyll maximum, produced about 40 pellets per day, which contained a carbon and nitrogen content equivalent to 8% and 6% of body carbon, respectively, and 2% of body nitrogen. In experiments, the carbon:nitrogen (C:N) ratio by weight of suspended particulates, C. hyperboreus, and fecal pellets was 6.7, 7.7 and 28.5, respectively. The unusually high C:N ratio for pellets, in part, may be attributed to elevated ratios of > 20μm size fractions of particulate organic matter, the size fraction more common in the diet of these large copepods and the fraction dominated by diatoms according to microscopic and pigment data. The implied elevated C:N ratios of large phytoplankton cells were probably due to nitrogen deficiency, as shown by other studies in this region. In addition, female C. hyperboreus appeared to be more efficient in assimilating nitrogen than carbon, which also would have contributed to high C:N ratios in egested pellets. Unfractionated POC concentrations explained 54% of the variability in carbon egestion and 70% of the variability in nitrogen egestion in copepods, whereas copepod body content accounted for little of the variation on the short time scales of the experiments. Carbon egestion by C. hyperboreus was positively correlated with POC concentrations at the depth of the chlorophyll maximum, while nitrogen egestion was negatively correlated with PON concentrations in the euphotic zone. Estimates of potential community egestion rates for the upper water column indicate that copepods represent a major pathway of organic carbon transformation in this Arctic shelf system. On average, copepods may have ingested 45% of the primary production and egested fecal matter equivalent to 20% of the carbon and 12% of the nitrogen particulate flux sedimenting from the surface layer. However, several lines of evidence suggest that pellets were remineralized in the water column and, hence, may have contributed little organic carbon and nitrogen to the benthos.

Effects of fully open-air [CO2] elevation on leaf photosynthesis and ultrastructure of Isatis indigotica fort.

PubMed

Hao, Xingyu; Li, Ping; Feng, Yongxiang; Han, Xue; Gao, Ji; Lin, Erda; Han, Yuanhuai

2013-01-01

Traditional Chinese medicine relies heavily on herbs, yet there is no information on how these herb plants would respond to climate change. In order to gain insight into such response, we studied the effect of elevated [CO2] on Isatis indigotica Fort, one of the most popular Chinese herb plants. The changes in leaf photosynthesis, chlorophyll fluorescence, leaf ultrastructure and biomass yield in response to elevated [CO2] (550±19 µmol mol(-1)) were determined at the Free-Air Carbon dioxide Enrichment (FACE) experimental facility in North China. Photosynthetic ability of I. indigotica was improved under elevated [CO2]. Elevated [CO2] increased net photosynthetic rate (P N), water use efficiency (WUE) and maximum rate of electron transport (J max) of upper most fully-expended leaves, but not stomatal conductance (gs), transpiration ratio (Tr) and maximum velocity of carboxylation (V c,max). Elevated [CO2] significantly increased leaf intrinsic efficiency of PSII (Fv'/Fm') and quantum yield of PSII(ΦPS II ), but decreased leaf non-photochemical quenching (NPQ), and did not affect leaf proportion of open PSII reaction centers (qP) and maximum quantum efficiency of PSII (Fv/Fm). The structural chloroplast membrane, grana layer and stroma thylakoid membranes were intact under elevated [CO2], though more starch grains were accumulated within the chloroplasts than that of under ambient [CO2]. While the yield of I. indigotica was higher due to the improved photosynthesis under elevated [CO2], the content of adenosine, one of the functional ingredients in indigowoad root was not affected.

Optimization of pre-sowing magnetic field doses through RSM in pea

NASA Astrophysics Data System (ADS)

Iqbal, M.; Ahmad, I.; Hussain, S. M.; Khera, R. A.; Bokhari, T. H.; Shehzad, M. A.

2013-09-01

Seed pre-sowing magnetic field treatment was reported to induce biochemical and physiological changes. In the present study, response surface methodology was used for deduction of optimal magnetic field doses. Improved growth and yield responses in the pea cultivar were achieved using a rotatable central composite design and multivariate data analysis. The growth parameters such as root and shoot fresh masses and lengths as well as yield were enhanced at a certain magnetic field level. The chlorophyll contents were also enhanced significantly vs. the control. The low magnetic field strength for longer duration of exposure/ high strength for shorter exposure were found to be optimal points for maximum responses in root fresh mass, chlorophyll `a' contents, and green pod yield/plant, respectively and a similar trend was observed for other measured parameters. The results indicate that the magnetic field pre-sowing seed treatment can be used practically to enhance the growth and yield in pea cultivar and response surface methodology was found an efficient experimental tool for optimization of the treatment level to obtain maximum response of interest.

Satellite-observed variability of phytoplankton size classes associated with a cold eddy in the South China Sea.

PubMed

Lin, Junfang; Cao, Wenxi; Wang, Guifen; Hu, Shuibo

2014-06-15

Ocean-color remote sensing has been used as a tool to detect phytoplankton size classes (PSCs). In this study, a three-component model of PSC was reparameterized using seven years of pigment measurements acquired in the South China Sea (SCS). The model was then used to infer PSC in a cyclonic eddy which was observed west of Luzon Island from SeaWiFS chlorophyll-a (chla) and sea-surface height anomaly (SSHA) products. Enhanced productivity and a shift in the PSC were observed, which were likely due to upwelling of nutrient-rich water into the euphotic zone. The supply of nutrients promoted the growth of larger cells (micro- and nanoplankton), and the PSC shifted to greater sizes. However, the picoplankton were still important and contributed ∼48% to total chla concentration. In addition, PSC time series revealed a lag period of about three weeks between maximum eddy intensity and maximum chlorophyll, which may have been related to phytoplankton growth rate and duration of eddy intensity. Copyright © 2014 Elsevier Ltd. All rights reserved.

Metaproteome of the viral concentrates from the deep chlorophyll maximum of the South China Sea

NASA Astrophysics Data System (ADS)

Xie, Zhang-Xian; Chen, Feng; Zhang, Shu-Feng; Wang, Ming-Hua; Zhang, Hao; Kong, Ling-Fen; Dai, Min-Han; Hong, Hua-Sheng; Lin, Lin; Wang, Da-Zhi

2016-04-01

Viral concentrates (VCs) have been commonly used for studying viral diversity, viral metagenomics and virus-host interactions in the natural ecosystem. However, the protein characteristics of VCs have not been explored. Here, we applied shotgun proteomics to characterize the proteins of VCs collected from the oligotrophic deep chlorophyll maximum of the South China Sea. We found that 34% of the identified proteins were assigned to the viruses, mainly being those of SAR11 related bacteria, cyanobacteria and picophytoeukaryotes. The remaining 66% were non-viral proteins mostly originating from diverse bacteria, such as SAR324, SAR11 and the Alteromonadales, and were functionally dominated by transport, translation, sulfur metabolism and one-carbon metabolism. Among the non-viral proteins, 28% were extracellular proteins and 10% were identified exclusively in the VCs, suggesting that non-viral entities might exist in the VCs. This study demonstrated that metaproteomics provides a valuable avenue to explore not only the diversity and structure of a viral community but also the novel ecological functions affiliated with microbes in the natural environment.

Influence of nitrogen and phosphorous on the growth and root morphology of Acer mono

PubMed Central

Zhang, Peng; Shen, Hai-long; Salahuddin

2017-01-01

Nitrogen and phosphorous are critical determinants of plant growth and productivity, and both plant growth and root morphology are important parameters for evaluating the effects of supplied nutrients. Previous work has shown that the growth of Acer mono seedlings is retarded under nursery conditions; we applied different levels of N (0, 5, 10, and 15 g plant-1) and P (0, 4, 6 and 8 g plant-1) fertilizer to investigate the effects of fertilization on the growth and root morphology of four-year-old seedlings in the field. Our results indicated that both N and P application significantly affected plant height, root collar diameter, chlorophyll content, and root morphology. Among the nutrient levels, 10 g N and 8 g P were found to yield maximum growth, and the maximum values of plant height, root collar diameter, chlorophyll content, and root morphology were obtained when 10 g N and 8 g P were used together. Therefore, the present study demonstrates that optimum levels of N and P can be used to improve seedling health and growth during the nursery period. PMID:28234921

Contribution of mycosporine-like amino acids and colored dissolved and particulate matter to sea ice optical properties and ultraviolet attenuation

PubMed Central

Uusikivi, Jari; Vähätalo, Anssi V.; Granskog, Mats A.; Sommaruga, Ruben

2010-01-01

In the Baltic Sea ice, the spectral absorption coefficients for particulate matter (PM) were about two times higher at ultraviolet wavelengths than at photosynthetically available radiation (PAR) wavelengths. PM absorption spectra included significant absorption by mycosporine-like amino acids (MAAs) between 320 and 345 nm. In the surface ice layer, the concentration of MAAs (1.37 μg L−1) was similar to that of chlorophyll a, resulting in a MAAs-to-chlorophyll a ratio as high as 0.65. Ultraviolet radiation (UVR) intensity and the ratio of UVR to PAR had a strong relationship with MAAs concentration (R2 = 0.97, n = 3) in the ice. In the surface ice layer, PM and especially MAAs dominated the absorption (absorption coefficient at 325 nm: 0.73 m−1). In the columnar ice layers, colored dissolved organic matter was the most significant absorber in the UVR (< 380 nm) (absorption coefficient at 325 nm: 1.5 m−1). Our measurements and modeling of UVR and PAR in Baltic Sea ice show that organic matter, both particulate and dissolved, influences the optical properties of sea ice and strongly modifies the UVR exposure of biological communities in and under snow-free sea ice. PMID:20585592

Negative response of photosynthesis to natural and projected high seawater temperatures estimated by pulse amplitude modulation fluorometry in a temperate coral

PubMed Central

Caroselli, Erik; Falini, Giuseppe; Goffredo, Stefano; Dubinsky, Zvy; Levy, Oren

2015-01-01

Balanophyllia europaea is a shallow water solitary zooxanthellate coral, endemic to the Mediterranean Sea. Extensive field studies across a latitudinal temperature gradient highlight detrimental effects of rising temperatures on its growth, demography, and skeletal characteristics, suggesting that depression of photosynthesis at high temperatures might cause these negative effects. Here we test this hypothesis by analyzing, by means of pulse amplitude modulation fluorometry, the photosynthetic efficiency of B. europaea specimens exposed in aquaria to the annual range of temperatures experienced in the field (13, 18, and 28°C), and two extreme temperatures expected for 2100 as a consequence of global warming (29 and 32°C). The indicators of photosynthetic performance analyzed (maximum and effective quantum yield) showed that maximum efficiency was reached at 20.0–21.6°C, slightly higher than the annual mean temperature in the field (18°C). Photosynthetic efficiency decreased from 20.0 to 13°C and even more strongly from 21.6 to 32°C. An unusual form of bleaching was observed, with a maximum zooxanthellae density at 18°C that strongly decreased from 18 to 32°C. Chlorophyll a concentration per zooxanthellae cell showed an opposite trend as it was minimal at 18°C and increased from 18 to 32°C. Since the areal chlorophyll concentration is the product of the zooxanthellae density and its cellular content, these trends resulted in a homogeneous chlorophyll concentration per coral surface across temperature treatments. This confirms that B. europaea photosynthesis is progressively depressed at temperatures >21.6°C, supporting previous hypotheses raised by the studies on growth and demography of this species. This study also confirms the threats posed to this species by the ongoing seawater warming. PMID:26582993

Seasonal pattern of metal bioaccumulation and their toxicity on Sphagnum squarrosum.

PubMed

Saxena, Anuj

2006-01-01

Present study was undertaken as an attempt to study the effect of pollutants on biological responses of Sphagnum growing at Kainchi, Kumaon hills (Uttranchal). Sphagnum plants of almost identical size, collected from the marked sites of Kainchi in different seasons viz., monsoon, winter, summer and again in monsoon, were analysed for chlorophyll, protein, shoot length and nitrate reductase and peroxidase activities. Maximum chlorophyll, protein, shoots length and nitrate reductase activities were observed during the monsoon while minimum in summers. The abundance of Sphagnum and two other bryophytes, Marchantia and Plagiochasma was also higher in monsoon than in other seasons. The study also indicated that Sphagnum has more bioaccumulation and tolerance potential for heavy metals than Marchantia and Plagiochasma.

Electron transport efficiency at opposite leaf sides: effect of vertical distribution of leaf angle, structure, chlorophyll content and species in a forest canopy.

PubMed

Mänd, Pille; Hallik, Lea; Peñuelas, Josep; Kull, Olevi

2013-02-01

We investigated changes in chlorophyll a fluorescence from alternate leaf surfaces to assess the intraleaf light acclimation patterns in combination with natural variations in radiation, leaf angles, leaf mass per area (LMA), chlorophyll content (Chl) and leaf optical parameters. Measurements were conducted on bottom- and top-layer leaves of Tilia cordata Mill. (a shade-tolerant sub-canopy species, sampled at heights of 11 and 16 m) and Populus tremula L. (a light-demanding upper canopy species, sampled at canopy heights of 19 and 26 m). The upper canopy species P. tremula had a six times higher PSII quantum yield (Φ(II)) and ratio of open reaction centres (qP), and a two times higher LMA than T. cordata. These species-specific differences were also present when the leaves of both species were in similar light conditions. Leaf adaxial/abaxial fluorescence ratio was significantly larger in the case of more horizontal leaves. Populus tremula (more vertical leaves), had smaller differences in fluorescence parameters between alternate leaf sides compared with T. cordata (more horizontal leaves). However, optical properties on alternate leaf sides showed a larger difference for P. tremula. Intraspecifically, the measured optical parameters were better correlated with LMA than with leaf Chl. Species-specific differences in leaf anatomy appear to enhance the photosynthetic potential of leaf biochemistry by decreasing the interception of excess light in P. tremula and increasing the light absorptance in T. cordata. Our results indicate that intraleaf light absorption gradient, described here as leaf adaxial/abaxial side ratio of chlorophyll a fluorescence, varies significantly with changes in leaf light environment in a multi-layer multi-species tree canopy. However, this variation cannot be described merely as a simple function of radiation, leaf angle, Chl or LMA, and species-specific differences in light acclimation strategies should also be considered.

Primary production in a tropical large lake: the role of phytoplankton composition.

PubMed

Darchambeau, F; Sarmento, H; Descy, J-P

2014-03-01

Phytoplankton biomass and primary production in tropical large lakes vary at different time scales, from seasons to centuries. We provide a dataset made of 7 consecutive years of phytoplankton biomass and production in Lake Kivu (Eastern Africa). From 2002 to 2008, bi-weekly samplings were performed in a pelagic site in order to quantify phytoplankton composition and biomass, using marker pigments determined by HPLC. Primary production rates were estimated by 96 in situ (14)C incubations. A principal component analysis showed that the main environmental gradient was linked to a seasonal variation of the phytoplankton assemblage, with a clear separation between diatoms during the dry season and cyanobacteria during the rainy season. A rather wide range of the maximum specific photosynthetic rate (PBm) was found, ranging between 1.15 and 7.21 g carbong(-1)chlorophyll ah(-1), and was best predicted by a regression model using phytoplankton composition as an explanatory variable. The irradiance at the onset of light saturation (Ik) ranged between 91 and 752 μE m(-2)s(-1) and was linearly correlated with the mean irradiance in the mixed layer. The inter-annual variability of phytoplankton biomass and production was high, ranging from 53 to 100 mg chlorophyll am(-2) (annual mean) and from 143 to 278 g carbon m(-2)y(-1), respectively. The degree of seasonal mixing determined annual production, demonstrating the sensitivity of tropical lakes to climate variability. A review of primary production of other African great lakes allows situating Lake Kivu productivity in the same range as that of lakes Tanganyika and Malawi, even if mean phytoplankton biomass was higher in Lake Kivu. Copyright © 2013 Elsevier B.V. All rights reserved.

Oxygen distribution and aerobic respiration in the north and south eastern tropical Pacific oxygen minimum zones

NASA Astrophysics Data System (ADS)

Tiano, Laura; Garcia-Robledo, Emilio; Dalsgaard, Tage; Devol, Allan H.; Ward, Bess B.; Ulloa, Osvaldo; Canfield, Donald E.; Peter Revsbech, Niels

2014-12-01

Highly sensitive STOX O2 sensors were used for determination of in situ O2 distribution in the eastern tropical north and south Pacific oxygen minimum zones (ETN/SP OMZs), as well as for laboratory determination of O2 uptake rates of water masses at various depths within these OMZs. Oxygen was generally below the detection limit (few nmol L-1) in the core of both OMZs, suggesting the presence of vast volumes of functionally anoxic waters in the eastern Pacific Ocean. Oxygen was often not detectable in the deep secondary chlorophyll maximum found at some locations, but other secondary maxima contained up to 0.4 μmol L-1. Directly measured respiration rates were high in surface and subsurface oxic layers of the coastal waters, reaching values up to 85 nmol L-1 O2 h-1. Substantially lower values were found at the depths of the upper oxycline, where values varied from 2 to 33 nmol L-1 O2 h-1. Where secondary chlorophyll maxima were found the rates were higher than in the oxic water just above. Incubation times longer than 20 h, in the all-glass containers, resulted in highly increased respiration rates. Addition of amino acids to the water from the upper oxycline did not lead to a significant initial rise in respiration rate within the first 20 h, indicating that the measurement of respiration rates in oligotrophic Ocean water may not be severely affected by low levels of organic contamination during sampling. Our measurements indicate that aerobic metabolism proceeds efficiently at extremely low oxygen concentrations with apparent half-saturation concentrations (Km values) ranging from about 10 to about 200 nmol L-1.

Physical and Biogeochemical Controls of the Phytoplankton Blooms in North Western Mediterranean Sea: A Multiplatform Approach Over a Complete Annual Cycle (2012-2013 DEWEX Experiment)

NASA Astrophysics Data System (ADS)

Mayot, Nicolas; D'Ortenzio, Fabrizio; Taillandier, Vincent; Prieur, Louis; de Fommervault, Orens Pasqueron; Claustre, Hervé; Bosse, Anthony; Testor, Pierre; Conan, Pascal

2017-12-01

The North Western Mediterranean Sea exhibits recurrent and significant autumnal and spring phytoplankton blooms. The existence of these two blooms coincides with typical temperate dynamics. To determine the potential control of physical and biogeochemical factors on these phytoplankton blooms, data from a multiplatform approach (combining ships, Argo and BGC-Argo floats, and bio-optical gliders) were analyzed in association with satellite observations in 2012-2013. The satellite framework allowed a simultaneous analysis over the whole annual cycle of in situ observations of mixed layer depth, photosynthetical available radiation, particle backscattering, nutrients (nitrate and silicate), and chlorophyll-a concentrations. During the year 2012-2013, satellite ocean color observations, confirmed by in situ data, have revealed the existence of two areas (or bioregions) with comparable autumnal blooms but contrasting spring blooms. In both bioregions, the ratio of the euphotic zone (defined as the isolume 0.415 mol photons m-2 d-1, Z0.415) and the MLD identified the initiation of the autumnal bloom, as well as the maximal annual increase in [Chl-a] in spring. In fact, the autumnal phytoplankton bloom might be initiated by mixing of the summer shallowing deep chlorophyll maximum, while the spring restratification (when Z0.415/MLD ratio became >1) might induce surface phytoplankton production that largely overcomes the losses. Finally, winter deep convection events that took place in one of the bioregions induced higher net accumulation rate of phytoplankton in spring associated with a diatom-dominated phytoplankton community principally. We suggest that very deep winter MLD lead to an increase in surface silicates availability, which favored the development of diatoms.

Photosynthetic adaptation strategy of Ulva prolifera floating on the sea surface to environmental changes.

PubMed

Zhao, Xinyu; Tang, Xuexi; Zhang, Huanxin; Qu, Tongfei; Wang, Ying

2016-10-01

For 8 consecutive years, a green tide has originated in the southern Yellow Sea and spread to the Qingdao offshore area. The causative species, Ulva prolifera, always forms a very thick thallus mat that is capable of drifting long distances over long periods. During this process, although the thalli face disturbance by complex environmental factors, they maintain high biomass and proliferation. We hypothesized that some form of photosynthetic adaptation strategy must exist to protect the thalli. Therefore, we studied the different photosynthetic response characteristics of the surface and lower layers of the floating thallus mats, and investigated the physiological and molecular-level adaptation mechanisms. The results showed that: (1) U. prolifera has strong photosynthetic capability that ensures it can gain sufficient energy to increase its biomass and adapt to long-distance migration. (2) Surface layer thalli adapt to the complex environment by dissipating excess energy via photosynthetic quantum control (energy quenching and energy redistribution between PSII/PSI) to avoid irreversible damage to the photosynthetic system. (3) Lower layer thalli increase their contents of Chlorophyll a (Chl a) and Chlorophyll b (Chl b) and decrease their Chl a/Chl b ratio to improve their ability to use light energy. (4) U. prolifera has strong photosynthetic plasticity and can adapt to frequent exchange between the surface and lower layer environments because of wave disturbance. Pigment component changes, energy quenching, and energy redistribution between PSII/PSI contribute to this photosynthetic plasticity. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Simulation of annual plankton productivity cycle in the Black Sea by a one-dimensional physical-biological model

NASA Astrophysics Data System (ADS)

Oguz, Temel; Ducklow, Hugh; Malanotte-Rizzoli, Paola; Tugrul, Suleyman; Nezlin, Nikolai P.; Unluata, Umit

1996-07-01

The annual cycle of the plankton dynamics in the central Black Sea is studied by a one-dimensional vertically resolved physical-biological upper ocean model, coupled with the Mellor-Yamada level 2.5 turbulence closure scheme. The biological model involves interactions between the inorganic nitrogen (nitrate, ammonium), phytoplankton and herbivorous zooplankton biomasses, and detritus. Given a knowledge of physical forcing, the model simulates main observed seasonal and vertical characteristic features, in particular, formation of the cold intermediate water mass and yearly evolution of the upper layer stratification, the annual cycle of production with the fall and the spring blooms, and the subsurface phytoplankton maximum layer in summer, as well as realistic patterns of particulate organic carbon and nitrogen. The computed seasonal cycles of the chlorophyll and primary production distributions over the euphotic layer compare reasonably well with the data. Initiation of the spring bloom is shown to be critically dependent on the water column stability. It commences as soon as the convective mixing process weakens and before the seasonal stratification of surface waters begins to develop. It is followed by a weaker phytoplankton production at the time of establishment of the seasonal thermocline in April. While summer nutrient concentrations in the mixed layer are low enough to limit production, the layer between the thermocline and the base of the euphotic zone provides sufficient light and nutrient to support subsurface phytoplankton development. The autumn bloom takes place sometime between October and December depending on environmental conditions. In the case of weaker grazing pressure to control the growth rate, the autumn bloom shifts to December-January and emerges as the winter bloom, or, in some cases, is connected with the spring bloom to form one unified continuous bloom structure during the January-March period. These bloom structures are similar to the year-to-year variabilities present in the data.

Annual cycle of zooplankton abundance and species composition in Izmit Bay (the northeastern Marmara Sea)

NASA Astrophysics Data System (ADS)

Isinibilir, Melek; Kideys, Ahmet E.; Tarkan, Ahmet N.; Yilmaz, I. Noyan

2008-07-01

The monthly abundance, biomass and taxonomic composition of zooplankton of Izmit Bay (the northeastern Marmara Sea) were studied from October 2001 to September 2002. Most species within the zooplankton community displayed a clear pattern of succession throughout the year. Generally copepods and cladocerans were the most abundant groups, while the contribution of meroplankton increased at inner-most stations and dominated the zooplankton. Both species number ( S) and diversity ( H') were positively influenced by the increase in salinity of upper layers ( r = 0.30 and r = 0.31, p < 0.001, respectively), while chlorophyll a was negatively affected ( r = -0.36, p < 0.001). Even though Noctiluca scintillans had a significant seasonality ( F11,120 = 8.45, p < 0.001, ANOVA), abundance was not related to fluctuations in temperature and only chlorophyll a was adversely correlated ( r = -0.35, p < 0.001). In general, there are some minor differences in zooplankton assemblages of upper and lower layers. A comparison of the species composition and abundance of Izmit Bay with other Black Sea bays reveals a high similarity between them.

Quality evaluation of the edible blue-green alga Nostoc flagelliforme using a chlorophyll fluorescence parameter and several biochemical markers.

PubMed

Gao, Xiang; Yang, Yiwen; Ai, Yufeng; Luo, Hongyi; Qiu, Baosheng

2014-01-15

Nostoc flagelliforme is an edible blue-green alga with herbal and dietary values. Due to the diminishing supply of natural N. flagelliforme and the large investment on the development of its cultivation technology, it is anticipated that artificially cultured N. flagelliforme will soon sustain the market supply. Once this change occurs, the storage-associated quality problem will become the focus of attention for future trade. In this paper, we used a chlorophyll fluorescence parameter, maximum quantum efficiency of Photosystem II (Fv/Fm), and several biomarkers to evaluate the quality of several N. flagelliforme samples. It was found that longer storage times resulted in darker coloured solutions (released pigments) and decreased amounts of chlorophyll a (Chl a) and water-soluble sugars (WSS). Additionally, a higher Fv/Fm value suggests better physiological recovery and quality. In actual application, determination of Fv/Fm would be the first step for evaluating the quality of N. flagelliforme, and the biochemical indexes would serve as good secondary markers. Copyright © 2013 Elsevier Ltd. All rights reserved.

Off-Nadir Hyperspectral Sensing for Estimation of Vertical Profile of Leaf Chlorophyll Content within Wheat Canopies

PubMed Central

Huang, Wenjiang; Zhou, Xianfeng; Ye, Huichun; Dong, Yingying

2017-01-01

Monitoring the vertical profile of leaf chlorophyll (Chl) content within winter wheat canopies is of significant importance for revealing the real nutritional status of the crop. Information on the vertical profile of Chl content is not accessible to nadir-viewing remote or proximal sensing. Off-nadir or multi-angle sensing would provide effective means to detect leaf Chl content in different vertical layers. However, adequate information on the selection of sensitive spectral bands and spectral index formulas for vertical leaf Chl content estimation is not yet available. In this study, all possible two-band and three-band combinations over spectral bands in normalized difference vegetation index (NDVI)-, simple ratio (SR)- and chlorophyll index (CI)-like types of indices at different viewing angles were calculated and assessed for their capability of estimating leaf Chl for three vertical layers of wheat canopies. The vertical profiles of Chl showed top-down declining trends and the patterns of band combinations sensitive to leaf Chl content varied among different vertical layers. Results indicated that the combinations of green band (520 nm) with NIR bands were efficient in estimating upper leaf Chl content, whereas the red edge (695 nm) paired with NIR bands were dominant in quantifying leaf Chl in the lower layers. Correlations between published spectral indices and all NDVI-, SR- and CI-like types of indices and vertical distribution of Chl content showed that reflectance measured from 50°, 30° and 20° backscattering viewing angles were the most promising to obtain information on leaf Chl in the upper-, middle-, and bottom-layer, respectively. Three types of optimized spectral indices improved the accuracy for vertical leaf Chl content estimation. The optimized three-band CI-like index performed the best in the estimation of vertical distribution of leaf Chl content, with R2 of 0.84–0.69, and RMSE of 5.37–5.56 µg/cm2 from the top to the bottom layers, while the optimized SR-like index was recommended for the bottom Chl estimation due to its simple and universal form. We suggest that it is necessary to take into account the penetration characteristic of the light inside the canopy for different Chl absorption regions of the spectrum and the formula used to derive spectral index when estimating the vertical profile of leaf Chl content using off-nadir hyperspectral data. PMID:29168757

Benthic cyanobacterial mats in the high arctic: multi-layer structure and fluorescence responses to osmotic stress.

PubMed

Lionard, Marie; Péquin, Bérangère; Lovejoy, Connie; Vincent, Warwick F

2012-01-01

Cyanobacterial mats are often a major biological component of extreme aquatic ecosystems, and in polar lakes and streams they may account for the dominant fraction of total ecosystem biomass and productivity. In this study we examined the vertical structure and physiology of Arctic microbial mats relative to the question of how these communities may respond to ongoing environmental change. The mats were sampled from Ward Hunt Lake (83°5.297'N, 74°9.985'W) at the northern coast of Arctic Canada, and were composed of three visibly distinct layers. Microsensor profiling showed that there were strong gradients in oxygen within each layer, with an overall decrease from 100% saturation at the mat surface to 0%, at the bottom, accompanied by an increase of 0.6 pH units down the profile. Gene clone libraries (16S rRNA) revealed the presence of Oscillatorian sequences throughout the mat, while Nostoc related species dominated the two upper layers, and Nostocales and Synechococcales sequences were common in the bottom layer. High performance liquid chromatography analyses showed a parallel gradient in pigments, from high concentrations of UV-screening scytonemin in the upper layer to increasing zeaxanthin and myxoxanthin in the bottom layer, and an overall shift from photoprotective to photosynthetic carotenoids down the profile. Climate change is likely to be accompanied by lake level fluctuations and evaporative concentration of salts, and thus increased osmotic stress of the littoral mat communities. To assess the cellular capacity to tolerate increasing osmolarity on physiology and cell membrane integrity, mat sections were exposed to a gradient of increasing salinities, and PAM measurements of in vivo chlorophyll fluorescence were made to assess changes in maximum quantum yield. The results showed that the mats were tolerant of up to a 46-fold increase in salinity. These features imply that cyanobacterial mats are resilient to ongoing climate change, and that in the absence of major biological perturbations, these vertically structured communities will continue to be a prominent feature of polar aquatic ecosystems.

Ultraviolet radiation and the photobiology of earth's early oceans.

PubMed

Cockell, C S

2000-10-01

During the Archean era (3.9-2.5 Ga ago) the earth was dominated by an oceanic lithosphere. Thus, understanding how life arose and persisted in the Archean oceans constitutes a major challenge in understanding early life on earth. Using a radiative transfer model of the late Archean oceans, the photobiological environment of the photic zone and the surface microlayer is explored at the time before the formation of a significant ozone column. DNA damage rates might have been approximately three orders of magnitude higher in the surface layer of the Archean oceans than on the present-day oceans, but at 30 m depth, damage may have been similar to the surface of the present-day oceans. However at this depth the risk of being transported to surface waters in the mixed layer was high. The mixed layer may have been inhabited by a low diversity UV-resistant biota. But it could have been numerically abundant. Repair capabilities similar to Deinococcus radiodurans would be sufficient to survive in the mixed layer. Diversity may have been greater in the region below the mixed layer and above the light compensation point corresponding to today's 'deep chlorophyll maximum'. During much of the Archean the air-water interface was probably an uninhabitable extreme environment for neuston. The habitability of some regions of the photic zone is consistent with the evidence embodied in the geologic record, which suggests an oxygenated upper layer in the Archean oceans. During the early Proterozoic, as ozone concentrations increased to a column abundance above 1 x 10(17) cm-2, UV stress would have been reduced and possibly a greater diversity of organisms could have inhabited the mixed layer. However, nutrient upwelling from newly emergent continental crusts may have been more significant in increasing total planktonic abundance in the open oceans and coastal regions than photobiological factors. The phohobiological environment of the Archean oceans has implications for the potential cross-transfer of life between other water bodies of the early Solar System, possibly on early Mars or the water bodies of a wet, early Venus.

Phytoplankton response to the contrasting physical regimes in the eastern Arabian Sea during north east monsoon

NASA Astrophysics Data System (ADS)

Chndrasekhararao, A. V.; Kurian, Siby; Vidya, P. J.; Gauns, Mangesh; Shenoy, Damodar M.; Mulla, Amara; Naik, Hema; Reddy, T. Venugopal; Naqvi, S. W. A.

2018-06-01

Phytoplankton abundance and composition in two contrasting physical regimes - convective mixing in the northeastern Arabian Sea (NEAS) and Arabian Sea mini warm pool (ASMWP) in the southeastern Arabian Sea (SEAS) - were investigated during the northeast monsoon (NEM) of 2015 and 2017. Observations in 2015 were carried out late during the season, and only one station in the north (at 21°N latitude) fell within the zone of convective mixing where microplankton was dominated by diatoms. In 2017, convective mixing occurred even at 16°N latitude, but the microplankton contribution was low, presumably due to low Si/N ratios. Within the convective mixing regime of the NEAS, chlorophyll (Chl) a concentrations were higher in 2015 (maximum 1080 ng L-1; average 493 ng L-1) than in 2017 (maximum 673 ng L-1; average 263 ng L-1). In contrast, picophytoplankton were dominant in the ASMWP of the SEAS with peak abundance associated with the subsurface chlorophyll maximum. A warm core eddy was present in 2015 in the SEAS where four times higher Prochlorococcus counts were found within the core of the eddy than at its periphery. This study provides the first description of the phytoplankton community in the ASMWP. Our results clearly demonstrate phytoplankton response to the contrasting physical conditions, highlighting the role of bio-physical coupling in the productivity of the Arabian Sea.

Deep two-photon microscopic imaging through brain tissue using the second singlet state from fluorescent agent chlorophyll α in spinach leaf

NASA Astrophysics Data System (ADS)

Shi, Lingyan; Rodríguez-Contreras, Adrián; Budansky, Yury; Pu, Yang; An Nguyen, Thien; Alfano, Robert R.

2014-06-01

Two-photon (2P) excitation of the second singlet (S) state was studied to achieve deep optical microscopic imaging in brain tissue when both the excitation (800 nm) and emission (685 nm) wavelengths lie in the "tissue optical window" (650 to 950 nm). S2 state technique was used to investigate chlorophyll α (Chl α) fluorescence inside a spinach leaf under a thick layer of freshly sliced rat brain tissue in combination with 2P microscopic imaging. Strong emission at the peak wavelength of 685 nm under the 2P S state of Chl α enabled the imaging depth up to 450 μm through rat brain tissue.

Deep two-photon microscopic imaging through brain tissue using the second singlet state from fluorescent agent chlorophyll α in spinach leaf.

PubMed

Shi, Lingyan; Rodríguez-Contreras, Adrián; Budansky, Yury; Pu, Yang; Nguyen, Thien An; Alfano, Robert R

2014-06-01

Two-photon (2P) excitation of the second singlet (S₂) state was studied to achieve deep optical microscopic imaging in brain tissue when both the excitation (800 nm) and emission (685 nm) wavelengths lie in the "tissue optical window" (650 to 950 nm). S₂ state technique was used to investigate chlorophyll α (Chl α) fluorescence inside a spinach leaf under a thick layer of freshly sliced rat brain tissue in combination with 2P microscopic imaging. Strong emission at the peak wavelength of 685 nm under the 2P S₂ state of Chl α enabled the imaging depth up to 450 μm through rat brain tissue.

Temporal dynamics of phytoplankton and heterotrophic protists at station ALOHA

NASA Astrophysics Data System (ADS)

Pasulka, Alexis L.; Landry, Michael R.; Taniguchi, Darcy A. A.; Taylor, Andrew G.; Church, Matthew J.

2013-09-01

Pico- and nano-sized autotrophic and heterotrophic unicellular eukaryotes (protists) are an important component of open-ocean food webs. To date, however, no direct measurements of cell abundance and biomass of these organisms have been incorporated into our understanding of temporal variability in the North Pacific Subtropical Gyre (NPSG). Based primarily on epifluoresence microscopy augmented with flow cytometry, we assessed the abundance and biomass of autotrophs and heterotrophic protists at Station ALOHA between June 2004 and January 2009. Autotrophic eukaryotes (A-EUKS) were more abundant in both the upper euphotic zone and deep chlorophyll maximum layer (DCML) during winter months, driven mostly by small flagellates. A higher ratio of A-EUKS to heterotrophic protists (A:H ratio) and a structural shift in A-EUKS to smaller cells during the winter suggests a seasonal minimum in grazing pressure. Although Prochlococcus spp. comprised between 30% and 50% of autotrophic biomass in both the upper and lower euphotic zone for most of the year, the community structure and seasonality of nano- and micro-phytoplankon differed between the two layers. In the upper layer, Trichodesmium spp. was an important contributor to total biomass (20-50%) in the late summer and early fall. Among A-EUKS, prymnesiophytes and other small flagellates were the dominant contributors to total biomass in both layers regardless of season (10-20% and 13-39%, respectively). Based on our biomass estimates, community composition was less seasonally variable in the DCML relative to the upper euphotic zone. In surface waters, mean estimates of C:Chl a varied with season—highest in the summer and lowest in the winter (means=156±157 and 89±32, respectively); however, there was little seasonal variability of C:Chl a in the DCML (100 m mean=29.9±9.8). Biomass of heterotrophic protists peaked in the summer and generally declined monotonically with depth without a deep maximum. Anomalous patterns of A:H variability during summer 2006 (low mesozooplankton, high A-EUKS and H-dinoflagellates) suggest that top-down forcing is strong enough to impact lower trophic levels in the NPSG. Continued studies of community abundance and biomass relationships are needed for adequate representations of plankton dynamics in ecosystem models and for developing a predictive understanding of both intra- and inter-lower trophic level responses to climate variability in the NPSG.

Summer diatom blooms in the North Pacific subtropical gyre: 2008-2009.

PubMed

Villareal, Tracy A; Brown, Colbi G; Brzezinski, Mark A; Krause, Jeffrey W; Wilson, Cara

2012-01-01

The summertime North Pacific subtropical gyre has widespread phytoplankton blooms between Hawaii and the subtropical front (∼30°N) that appear as chlorophyll (chl) increases in satellite ocean color data. Nitrogen-fixing diatom symbioses (diatom-diazotroph associations: DDAs) often increase 10(2)-10(3) fold in these blooms and contribute to elevated export flux. In 2008 and 2009, two cruises targeted satellite chlorophyll blooms to examine DDA species abundance, chlorophyll concentration, biogenic silica concentration, and hydrography. Generalized observations that DDA blooms occur when the mixed layer depth is < 70 m are supported, but there is no consistent relationship between mixed layer depth, bloom intensity, or composition; regional blooms between 22-34°N occur within a broader temperature range (21-26°C) than previously reported. In both years, the Hemiaulus-Richelia and Rhizosolenia-Richelia DDAs increased 10(2)-10(3) over background concentrations within satellite-defined bloom features. The two years share a common trend of Hemiaulus dominance of the DDAs and substantial increases in the >10 µm chl a fraction (∼40-90+% of total chl a). Integrated diatom abundance varied 10-fold over <10 km. Biogenic silica concentration tracked diatom abundance, was dominated by the >10 µm size fraction, and increased up to 5-fold in the blooms. The two years differed in the magnitude of the surface chl a increase (2009>2008), the abundance of pennate diatoms within the bloom (2009>2008), and the substantially greater mixed layer depth in 2009. Only the 2009 bloom had sufficient chl a in the >10 µm fraction to produce the observed ocean color chl increase. Blooms had high spatial variability; ocean color images likely average over numerous small events over time and space scales that exceed the individual event scale. Summertime DDA export flux noted at the Hawaii time-series Sta. ALOHA is probably a generalized feature of the eastern N. Pacific north to the subtropical front.

Variation in chlorophyll content per unit leaf area in spring wheat and implications for selection in segregating material.

PubMed

Hamblin, John; Stefanova, Katia; Angessa, Tefera Tolera

2014-01-01

Reduced levels of leaf chlorophyll content per unit leaf area in crops may be of advantage in the search for higher yields. Possible reasons include better light distribution in the crop canopy and less photochemical damage to leaves absorbing more light energy than required for maximum photosynthesis. Reduced chlorophyll may also reduce the heat load at the top of canopy, reducing water requirements to cool leaves. Chloroplasts are nutrient rich and reducing their number may increase available nutrients for growth and development. To determine whether this hypothesis has any validity in spring wheat requires an understanding of genotypic differences in leaf chlorophyll content per unit area in diverse germplasm. This was measured with a SPAD 502 as SPAD units. The study was conducted in series of environments involving up to 28 genotypes, mainly spring wheat. In general, substantial and repeatable genotypic variation was observed. Consistent SPAD readings were recorded for different sampling positions on leaves, between different leaves on single plant, between different plants of the same genotype, and between different genotypes grown in the same or different environments. Plant nutrition affected SPAD units in nutrient poor environments. Wheat genotypes DBW 10 and Transfer were identified as having consistent and contrasting high and low average SPAD readings of 52 and 32 units, respectively, and a methodology to allow selection in segregating populations has been developed.

Detection of herbicide effects on pigment composition and PSII photochemistry in Helianthus annuus by Raman spectroscopy and chlorophyll a fluorescence

NASA Astrophysics Data System (ADS)

Vítek, Petr; Novotná, Kateřina; Hodaňová, Petra; Rapantová, Barbora; Klem, Karel

2017-01-01

The effects of herbicides from three mode-of-action groups - inhibitors of protoporphyrinogen oxidase (carfentrazone-ethyl), inhibitors of carotenoid biosynthesis (mesotrione, clomazone, and diflufenican), and inhibitors of acetolactate synthase (amidosulfuron) - were studied in sunflower plants (Helianthus annuus). Raman spectroscopy, chlorophyll fluorescence (ChlF) imaging, and UV screening of ChlF were combined to evaluate changes in pigment composition, photosystem II (PSII) photochemistry, and non-photochemical quenching in plant leaves 6 d after herbicide application. The Raman signals of phenolic compounds, carotenoids, and chlorophyll were evaluated and differences in their intensity ratios were observed. Strongly augmented relative content of phenolic compounds was observed in the case of amidosulfuron-treated plants, with a simultaneous decrease in the chlorophyll/carotenoid intensity ratio. The results were confirmed by in vivo measurement of flavonols using UV screening of ChlF. Herbicides from the group of carotenoid biosynthesis inhibitors significantly decreased both the maximum quantum efficiency of PSII and non-photochemical quenching as determined by ChlF. Resonance Raman imaging (mapping) data with high resolution (150,000-200,000 spectra) are presented, showing the distribution of carotenoids in H. annuus leaves treated by two of the herbicides acting as inhibitors of carotenoid biosynthesis (clomazone or diflufenican). Clear signs were observed that the treatment induced carotenoid depletion within sunflower leaves. The depletion spatial pattern registered differed depending on the type of herbicide applied.

Chlorophyll fluorescence emission as a reporter on cold tolerance in Arabidopsis thaliana accessions

PubMed Central

Mishra, Anamika; Höermiller, Imke I; Heyer, Arnd G; Nedbal, Ladislav

2011-01-01

Non-invasive, high-throughput screening methods are valuable tools in breeding for abiotic stress tolerance in plants. Optical signals such as chlorophyll fluorescence emission can be instrumental in developing new screening techniques. In order to examine the potential of chlorophyll fluorescence to reveal plant tolerance to low temperatures, we used a collection of nine Arabidopsis thaliana accessions and compared their fluorescence features with cold tolerance quantified by the well established electrolyte leakage method on detached leaves. We found that, during progressive cooling, the minimal chlorophyll fluorescence emission rose strongly and that this rise was highly dependent on the cold tolerance of the accessions. Maximum quantum yield of PSII photochemistry and steady state fluorescence normalized to minimal fluorescence were also highly correlated to the cold tolerance measured by the electrolyte leakage method. In order to further increase the capacity of the fluorescence detection to reveal the low temperature tolerance, we applied combinatorial imaging that employs plant classification based on multiple fluorescence features. We found that this method, by including the resolving power of several fluorescence features, can be well employed to detect cold tolerance already at mild sub-zero temperatures. Therefore, there is no need to freeze the screened plants to the largely damaging temperatures of around −15°C. This, together with the method's easy applicability, represents a major advantage of the fluorescence technique over the conventional electrolyte leakage method. PMID:21427532

Sampling Biases in MODIS and SeaWiFS Ocean Chlorophyll Data

NASA Technical Reports Server (NTRS)

Gregg, Watson W.; Casey, Nancy W.

2007-01-01

Although modem ocean color sensors, such as MODIS and SeaWiFS are often considered global missions, in reality it takes many days, even months, to sample the ocean surface enough to provide complete global coverage. The irregular temporal sampling of ocean color sensors can produce biases in monthly and annual mean chlorophyll estimates. We quantified the biases due to sampling using data assimilation to create a "truth field", which we then sub-sampled using the observational patterns of MODIS and SeaWiFS. Monthly and annual mean chlorophyll estimates from these sub-sampled, incomplete daily fields were constructed and compared to monthly and annual means from the complete daily fields of the assimilation model, at a spatial resolution of 1.25deg longitude by 0.67deg latitude. The results showed that global annual mean biases were positive, reaching nearly 8% (MODIS) and >5% (SeaWiFS). For perspective the maximum interannual variability in the SeaWiFS chlorophyll record was about 3%. Annual mean sampling biases were low (<3%) in the midlatitudes (between -40deg and 40deg). Low interannual variability in the global annual mean sampling biases suggested that global scale trend analyses were valid. High latitude biases were much higher than the global annual means, up to 20% as a basin annual mean, and over 80% in some months. This was the result of the high solar zenith angle exclusion in the processing algorithms. Only data where the solar angle is <75deg are permitted, in contrast to the assimilation which samples regularly over the entire area and month. High solar zenith angles do not facilitate phytoplankton photosynthesis and consequently low chlorophyll concentrations occurring here are missed by the data sets. Ocean color sensors selectively sample in locations and times of favorable phytoplankton growth, producing overestimates of chlorophyll. The biases derived from lack of sampling in the high latitudes varied monthly, leading to artifacts in the apparent seasonal cycle from ocean color sensors. A false secondary peak in chlorophyll occurred in May-August, which resulted from lack of sampling in the Antarctic.

90% Below 10m: Summer Biomass and Productivity are Invisible to Satellites and Surface Transects in Modern Lake Michigan

NASA Astrophysics Data System (ADS)

Cuhel, R. L.; Aguilar, C.

2013-12-01

Deep biomass maxima, often identified through in vivo chlorophyll fluorescence profiles (DCM or deep chlorophyll maximum), have been common 'forever' in Lake Michigan. Usually present in the upper thermocline zone of 15-25m, summer DCM populations were characteristically dominated by diatoms. Increased light transmission in quagga mussel (QM) engineered Lake Michigan waters now has enabled phytoplankton to proliferate in discrete layers as deep as 50m. Instances of multiple fluorescence maxima and transmission minima, often not coincident, document the habitat diversity available in clear, often sequentially stratified offshore waters and MidLake Reef Complex locations. Phytoplankton population structure has also changed, and diatoms have become a much smaller component of algal biomass. Discrete layers of chromatically adapted picoplankton now dominate the deepest biomass maxima. Photosynthetic characteristics differ substantially among leading edge, principal biomass or fluorescence, and deep trailing edge populations. Saturation coefficients are often as low as 25 uEin/m2/sec, or 1% of midday summer surface radiance. In vivo fluorescence is only loosely related to biomass, which is greatest in shallower zones of beam transmission minima. On a daily basis, areal primary productivity post-QM is less than half of previous levels, and seasonality has been muted. Spring bloom enhancement no longer exists, and the depth zone of maximum productivity is 10-20m deeper than during the diatom epoch. Altered phytoplankton community structure and decreased productivity left strong signals in biogeochemical time series measurements. A clear discontinuity in silicate cycling indicates dampened diatom productivity and consequently lower silica loss through deposition and burial. Porewater analysis pre- and post-QM shows evidence of reduced organic sedimentation overall, with an especially strong signal in decreased potential silicate efflux. Biogeochemical consequences include weaker nutrient gradients in nearsurface upper thermocline zones. Subsurface minima for silicate and nitrate are common, but of small magnitude compared to pre-QM profiles. By late July of 2013, total CO2 in deep waters increased by nearly 5% compared to surface, but the biomass and productivity maxima are far below the thermocline defining 'surface water.' Phosphate remains in the range of 10-20nM throughout the water column. Particulate P, the primary component of total P, is maximal in 15-25m depths but rarely exceeds 80nM P. Phytoplankton favor ammonium as an N source and recycling plus mussel excretion reduce demand for nitrate. As a result, many cycles and/or inventories for biomass and nutrient parameters appear to have reached new conditions quite different from pre-QM lake characteristics. The 15-year time series includes meteorologically anomalous years that are biogeochemically distinct from bracketing years, but interannual continuity is rare.

Drought is Coming: Monitoring Vegetation Response to Water Scarcity through Variable Chlorophyll a Fluorescence

NASA Astrophysics Data System (ADS)

Guadagno, C. R.; Beverly, D.; Pleban, J. R.; Speckman, H. N.; Ewers, B. E.; Weinig, C.

2017-12-01

Aridity is one of the most pronounced environmental limits to plant survival, and understanding how plants respond to drought and recovery is crucial for predicting impacts on managed and natural ecosystems. Changes in soil moisture conditions induce a suite of physiological responses from the cell to ecosystem scale, complicating the assessment of drought effects. Characterizing early indicators of water scarcity across species can inform biophysical models with improved understanding of plant hydraulics. While indexes exist for drought monitoring across scales, many are unable to identify imminent vegetative drought. We explore a method of early diagnosis using leaf-level and kinetic imaging measures of variable chlorophyll a fluorescence. This is a fast and reliable tool capturing leaf physiological changes in advance of changes in NDVI or passive solar induced fluorescence. Both image and leaf level Pulse Amplitude Method (PAM) measurements illustrate the utility of variable chlorophyll a fluorescence for monitoring vegetative drought. Variable fluorescence was monitored across populations of crops, desert shrubs, montane conifers and riparian deciduous trees under variable water regimes. We found a strong correlation (R = 0.85) between the maximum efficiency of photosystem II measured using variable fluorescence (Fv'Fm') and leaf level electrolyte leakage, a proximal cause of drought stress induced by cellular damage in leaves. This association was confirmed in two gymnosperm species (Picea engelmannii and Pinus contorta) and for diverse varieties of the crop species Brassica rapa. The use of chlorophyll a fluorescence per image also allowed for early detection of drought in aspen (Populus tremuloides). These results provide evidence that variable chlorophyll fluorescence decreases between 25% and 70% in mild and severely droughted twigs with respect to ones collected from trees in wet soil conditions. While current systems for monitoring variable fluorescence are limited in scale, chlorophyll fluorescence comprises an indicator of drought stress across multiple spatial scales, from leaf to ecosystem level.

Difference in oxidative stress tolerance between rice cultivars estimated with chlorophyll fluorescence analysis.

PubMed

Kasajima, Ichiro

2017-04-26

Oxidative stress is considered to be involved in growth retardation of plants when they are exposed to a variety of biotic and abiotic stresses. Despite its potential importance in improving crop production, comparative studies on oxidative stress tolerance between rice (Oryza sativa L.) cultivars are limited. This work describes the difference in term of oxidative stress tolerance between 72 rice cultivars. 72 rice cultivars grown under naturally lit greenhouse were used in this study. Excised leaf discs were subjected to a low concentration of methyl viologen (paraquat), a chemical reagent known to generate reactive oxygen species in chloroplast. Chlorophyll fluorescence analysis using a two-dimensional fluorescence meter, ion leakage analysis as well as the measurement of chlorophyll contents were used to evaluate the oxidative stress tolerance of leaf discs. Furthermore, fluorescence intensities were finely analyzed based on new fluorescence theories that we have optimized. Treatment of leaf discs with methyl viologen caused differential decrease of maximum quantum yield of photosystem II (Fv/Fm) between cultivars. Decrease of Fv/Fm was also closely correlated with increase of ion leakage and decrease of chlorophyll a/b ratio. Fv/Fm was factorized into photochemical and non-photochemical parameters to classify rice cultivars into sensitive and tolerant ones. Among the 72 compared rice cultivars, the traditional cultivar Co13 was identified as the most tolerant to oxidative stress. Koshihikari, a dominant modern Japonica cultivar in Japan as well as IR58, one of the modern Indica breeding lines exhibited a strong tolerance to oxidative stress. Close correlation between Fv/Fm and chlorophyll a/b ratio provides a simple method to estimate oxidative stress tolerance, without measurement of chlorophyll fluorescence with special equipment. The fact that modern cultivars, especially major cultivars possessed tolerance to oxidative stress suggests that oxidative stress tolerance is one of the agricultural traits prerequisite for improvement of modern rice cultivars. Data presented in this study would enable breeding of rice cultivars having strong tolerance to oxidative stress.

Impact of the river Liffey discharge on nutrient and chlorophyll concentrations in the Liffey estuary and Dublin Bay (Irish Sea)

NASA Astrophysics Data System (ADS)

O'Higgins, T. G.; Wilson, J. G.

2005-08-01

Temperature, salinity, nutrients (total oxidised nitrogen (TON), ammonium (NH 4) and orthophosphate (PO 4)) and chlorophyll a were monitored in the Liffey estuary and Dublin Bay from June 2000 to June 2003. Four groups of sites were defined comprising the upper estuary (Gp. I), the outer estuary (Gp. III) with a small set (Gp. II) of sites between Groups I and III heavily influenced by the sewage treatment works outflow, and the Bay proper (Gp. IV). Riverine inputs of TON and PO 4 were calculated at an average of 826 t N y -1 and 31 t P y -1, respectively, and were largely controlled by flow rate. The sewage treatment works were identified as a major source of PO 4 and NH 4 to the system. Mixing in the upper estuary of nutrient limited saline waters with hypernutrified river water regularly (i.e. annually) produced relatively high concentrations of chlorophyll a (>10 mg chl a m -3), and also sporadic blooms with extremely high chlorophyll a values (max. 121.6 mg chl a m -3). These latter phytoplankton blooms occurred in high salinity waters and were due to mixing of nutrient limited saline waters and nutrient rich river waters. The mean annual flux of phytoplankton carbon from the river Liffey was calculated at 23.5 t C y -1, of which half was accumulated or remineralised in the estuary and did not enter the Bay. In the Bay proper (Gp. IV) summer nutrient concentrations dropped below detection limits, and chlorophyll a concentrations followed the classic pattern with a spring bloom maximum of 5.5 mg chl a m -3. This pattern in nutrients and chlorophyll a came from the advection of waters into the Bay from an offshore source. Overall while there was considerable evidence for eutrophication in the estuary, the bay itself showed little biological response to nutrient loading.

Mesozooplankton grazing during spring sea-ice conditions in the eastern Bering Sea

NASA Astrophysics Data System (ADS)

Campbell, Robert G.; Ashjian, Carin J.; Sherr, Evelyn B.; Sherr, Barry F.; Lomas, Michael W.; Ross, Celia; Alatalo, Philip; Gelfman, Celia; Keuren, Donna Van

2016-12-01

Mesozooplankton (copepods and euphausiids) grazing rates and prey preferences were determined during a series of three research cruises to the eastern Bering Sea in spring 2008, 2009, and 2010. Chlorophyll was dominated by large cells (>5 μm), especially at bloom locations where they usually comprised greater than 90% of the total chlorophyll biomass. The relative importance of microzooplankton to the prey field biomass decreased with increasing chlorophyll concentration, and was less than 10% of the total prey biomass in ice-edge bloom regions. Overall, microzooplankton was the preferred prey of the mesozooplankton, although phytoplankton/ice algae were the dominant component of the diet because of their much greater biomass, especially during blooms. There were differences between mesozooplankton species in their prey preferences: Metridia pacifica, Pseudocalanus spp. and Calanus spp. had the strongest preference for microzooplankton prey, while euphausiids (Thysanoessa spp.) and Neocalanus flemingeri/plumchrus appeared to feed non-selectively on all prey items. Mesozooplankton exhibited a saturating feeding response to chlorophyll concentration (Holling's type II) that could be modeled by Michaelis-Menten equations. Taxa-specific maximum ingestion rates generally followed allometric theory, with smaller zooplankton having higher feeding rates than larger zooplankton, and ranged from about 4-30% body carbon day-1. Trophic cascades during grazing experiments could result in a substantial underestimate of chlorophyll ingestion rates, especially for those taxa that had a strong preference for microzooplankton. Grazing impacts by mesozooplankton on the integrated chlorophyll biomass and primary production were 2.7±4.4 and 26±48% day-1, respectively. Impacts increased significantly with increasing mesozooplankton biomass, which increased from early to late spring. However, grazing impacts were extremely low in ice-edge bloom regions. Our findings suggest that even when grazing by microzooplankton is included in our grazing impact estimates, about 50% of the primary production in phytoplankton blooms during spring on the eastern Bering Sea shelf is not grazed and is available for direct export to the benthic community.

Does elevated CO2 ameliorate the impact of O3 on chlorophyll content and photosynthesis in potato (Solanum tuberosum)?

PubMed

Donnelly, Alison; Craigon, Jim; Black, Colin R.; Colls, Jeremy J.; Landon, Geoff

2001-04-01

This study examined the impact of season-long exposure to elevated carbon dioxide (CO2) and ozone (O3), individually and in combination, on leaf chlorophyll content and gas exchange characteristics in potato (Solanum tuberosum L. cv. Bintje). Plants grown in open-top chambers were exposed to three CO2 (ambient, 550 and 680 µmol mol-1) and two O3 treatments (ambient and elevated; 25 and 65 nmol mol-1, 8 h day-1 means, respectively) between crop emergence and maturity; plants were also grown in unchambered field plots. Non-destructive measurements of chlorophyll content and visible foliar injury were made for all treatments at 2-week intervals between 43 and 95 days after emergence. Gas exchange measurements were made for all except the intermediate 550 µmol mol-1 CO2 treatment. Season-long exposure to elevated O3 under ambient CO2 reduced chlorophyll content and induced extensive visible foliar damage, but had little effect on net assimilation rate or stomatal conductance. Elevated CO2 had no significant effect on chlorophyll content, but greatly reduced the damaging impact of O3 on chlorophyll content and visible foliar damage. Light-saturated assimilation rates for leaves grown under elevated CO2 were consistently lower when measured under either elevated or ambient CO2 than in equivalent leaves grown under ambient CO2. Analysis of CO2 response curves revealed that CO2-saturated assimilation rate, maximum rates of carboxylation and electron transport and respiration decreased with time. CO2-saturated assimilation rate was reduced by elevated O3 during the early stages of the season, while respiration was significantly greater under elevated CO2 as the crop approached maturity. The physiological origins of these responses and their implications for the performance of potato in a changing climate are discussed.

Mutation in Mg-Protoporphyrin IX Monomethyl Ester Cyclase Decreases Photosynthesis Capacity in Rice

PubMed Central

Wang, Xuexia; Huang, Rongfeng; Quan, Ruidang

2017-01-01

In photosynthesis, the pigments chlorophyll a/b absorb light energy to convert to chemical energy in chloroplasts. Though most enzymes of chlorophyll biosynthesis from glutamyl-tRNA to chlorophyll a/b have been identified, the exact composition and regulation of the multimeric enzyme Mg-protoporphyrin IX monomethyl ester cyclase (MPEC) is largely unknown. In this study, we isolated a rice pale-green leaf mutant m167 with yellow-green leaf phenotype across the whole lifespan. Chlorophyll content decreases 43–51% and the granal stacks of chloroplasts becomes thinner in m167. Chlorophyll fluorescence parameters, including Fv/Fm (the maximum quantum efficiency of PSII) and quantum yield of PSII (Y(II)), were lower in m167 than those in wild type plants (WT), and photosynthesis rate decreases 40% in leaves of m167 mutant compared with WT plants, which lead to yield reduction in m167. Genetic analysis revealed that yellow-green leaf phenotype of m167 is controlled by a single recessive genetic locus. By positional cloning, a single mutated locus, G286A (Alanine 96 to Threonine in protein), was found in the coding sequence of LOC_Os01g17170 (Rice Copper Response Defect 1, OsCRD1), encoding a putative subunit of MPEC. Expression profile analysis demonstrated that OsCRD1 is mainly expressed in green tissues of rice. Sequence alignment analysis of CRD1 indicated that Alanine 96 is very conserved in all green plants and photosynthetic bacteria. OsCRD1 protein mainly locates in chloroplast and the point mutation A96T in OsCRD1 does not change its location. Therefore, Alanine96 of OsCRD1 might be fundamental for MPEC activity, mutation of which leads to deficiency in chlorophyll biosynthesis and chloroplast development and decreases photosynthetic capacity in rice. PMID:28129387

Light Absorption in Arctic Sea Ice - Black Carbon vs Chlorophyll

NASA Astrophysics Data System (ADS)

Ogunro, O. O.; Wingenter, O. W.; Elliott, S.; Hunke, E. C.; Flanner, M.; Wang, H.; Dubey, M. K.; Jeffery, N.

2015-12-01

The fingerprint of climate change is more obvious in the Arctic than any other place on Earth. This is not only because the surface temperature there has increased at twice the rate of global mean temperature but also because Arctic sea ice extent has reached a record low of 49% reduction relative to the 1979-2000 climatology. Radiation absorption through black carbon (BC) deposited on Arctic snow and sea ice surface is one of the major hypothesized contributors to the decline. However, we note that chlorophyll-a absorption owing to increasing biology activity in this region could be a major competitor during boreal spring. Modeling of sea-ice physical and biological processes together with experiments and field observations promise rapid progress in the quality of Arctic ice predictions. Here we develop a dynamic ice system module to investigate discrete absorption of both BC and chlorophyll in the Arctic, using BC deposition fields from version 5 of Community Atmosphere Model (CAM5) and vertically distributed layers of chlorophyll concentrations from Sea Ice Model (CICE). To this point, our black carbon mixing ratios compare well with available in situ data. Both results are in the same order of magnitude. Estimates from our calculations show that sea ice and snow around the Canadian Arctic Archipelago and Baffin Bay has the least black carbon absorption while values at the ice-ocean perimeter in the region of the Barents Sea peak significantly. With regard to pigment concentrations, high amounts of chlorophyll are produced in Arctic sea ice by the bottom microbial community, and also within the columnar pack wherever substantial biological activity takes place in the presence of moderate light. We show that the percentage of photons absorbed by chlorophyll in the spring is comparable to the amount attributed to BC, especially in areas where the total deposition rates are decreasing with time on interannual timescale. We expect a continuous increase in chlorophyll absorption as the biological activity becomes stronger in thin ice toward the center of the Arctic basin. Alternatively, a shift in relative importance could occur as total BC mixing ratios are reduced because of environmental advocacy.

[Effects of simulated acid rain on Quercus glauca seedlings photosynthesis and chlorophyll fluorescence].

PubMed

Li, Jia; Jiang, Hong; Yu, Shu-quan; Jiang, Fu-wei; Yin, Xiu-min; Lu, Mei-juan

2009-09-01

Taking the seedlings of Quercus glauca, a dominant evergreen broadleaf tree species in subtropical area, as test materials, this paper studied their photosynthesis, chlorophyll fluorescence, and chlorophyll content under effects of simulated acid rain with pH 2.5, 4.0, and 5.6 (CK). After 2-year acid rain stress, the net photosynthetic rate of Q. glauca increased significantly with decreasing pH of acid rain. The acid rain with pH 2.5 and 4.0 increased the stomatal conductance and transpiration rate, and the effect was more significant under pH 2.5. The intercellular CO2 concentration decreased in the order of pH 2.5 > pH 5.6 > pH 4.0. The maximum photosynthetic rate, light compensation point, light saturation point, and dark respiration rate were significantly higher under pH 2.5 and 4.0 than under pH 5.6, while the apparent quantum yield was not sensitive to acid rain stress. The maximal photochemical efficiency of PS II and the potential activity of PS II under pH 2.5 and 4.0 were significantly higher than those under pH 5.6. The relative chlorophyll content was in the order of pH 2.5 > pH 5.6 > pH 4.0, and there was a significant difference between pH 2.5 and 4.0. All the results suggested that the photosynthesis and chlorophyll fluorescence of Q. glauca increased under the effects of acid rain with pH 2.5 and 4.0, and the acid rain with pH 2.5 had more obvious effects.

Variability in chlorophyll fluorescence spectra of eggplant fruit grown under different light environments: a case study.

PubMed

Ospina Calvo, Brian; Parapugna, Tamara L; Lagorio, M Gabriela

2017-05-17

The main goal of the present work was to clarify physiological strategies in plants whose chloroplasts were developed under different light environments. The specific objective was to elucidate the influence of the spectral distribution of light on the chlorophyll fluorescence ratio and on photosynthetic parameters. To achieve this purpose, three species of eggplant fruit (black, purple and white striped and white) were used as a case study and their chlorophyll fluorescence was analyzed in detail. Spectra of the non-variable fluorescence in each part of the fruit were corrected for distortions by light reabsorption processes using a physical model. The main conclusion of this work was that the corrected fluorescence ratio was dependent on the contribution of each photosystem to the fluorescence and consequently on the environmental lighting conditions, becoming higher when illumination was rich in long wavelengths. Variable chlorophyll fluorescence, similar to that observed from plant leaves, was detected for the pulp of the black eggplant, for the pulp of the purple and white striped eggplant and for the intact fruit of the black eggplant. The maximum quantum efficiency of photosystem II in the light-adapted state (F' v /F' m ), the quantum efficiency of photosystem II (Φ PSII ), and the photochemical and non-photochemical quenching coefficients (qP and qNP/NPQ respectively) were determined in each case. The results could be explained very interestingly, in relation with the proportion of exciting light reaching each photosystem (I and II). The photochemical parameters obtained from variable chlorophyll fluorescence, allowed us to monitor non-destructively the physiological state of the black fruit during storage under both chilled or room-temperature conditions.

Lake Roosevelt Fisheries Evaluation Program, Part B; Limnology, Primary Production, and Zooplankton in Lake Roosevelt, Washington, 1998 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shields, John; Spotts, Jim; Underwood, Keith

2002-11-01

The Lake Roosevelt Fisheries Evaluation Program is the result of a merger between two projects, the Lake Roosevelt Monitoring Program (BPA No. 8806300) and the Lake Roosevelt Data Collection Project (BPA No. 9404300). These projects were merged in 1996 to continue work historically completed under the separate projects, and is now referred to as the Lake Roosevelt Fisheries Evaluation Program. The 1998 Annual Report, Part B. Limnology, Primary Production, and Zooplankton in Lake Roosevelt, Washington examined the limnology, primary production, and zooplankton at eleven locations throughout the reservoir. The 1998 research protocol required a continuation of the more complete examinationmore » of limnological parameters in Lake Roosevelt that began in 1997. Phytoplankton and periphyton speciation, phytoplankton and periphyton chlorophyll a analysis, complete zooplankton biomass analysis by taxonomic group, and an increased number of limnologic parameters (TDG, TDS, etc.) were examined and compared with 1997 results. Total dissolved gas levels were greatly reduced in 1998, compared with 1997, likely resulting from the relatively normal water year experienced in 1998. Mean water temperatures were similar to what was observed in past years, with a maximum of 22.7 C and a minimum of 2.6 C. Oxygen concentrations were also relatively normal, with a maximum of 16.6 mg/L, and a minimum of 0.9 mg/L. Phytoplankton in Lake Roosevelt was primarily composed of microplankton (29.6%), Cryptophyceae (21.7%), and Bacillriophyceae (17.0 %). Mean total phytoplankton chlorophyll a maximum concentration occurred in May (3.53 mg/m{sup 3}), and the minimum in January (0.39 mg/m{sup 3}). Phytoplankton chlorophyll a concentrations appear to be influenced by hydro-operations and temperature. Trophic status as indicated by phytoplankton chlorophyll a concentrations place Lake Roosevelt in the oligomesotrophic range. Periphyton colonization rates and biovolume were significantly greater at a depth of 1.5 m (5 ft) when compared with a 4.6 m (15 ft) depth, and during the shorter incubation periods (two and four weeks). Mean zooplankton densities were greatest for Copepoda (88 %), then Daphnia spp. (10%) and other Cladocera (2.1%), while the zooplankton biomass assessment indicated Daphnia spp. had the greatest biomass (53.6%), then Copepoda (44.0%) and other Cladocera (2.5%). Mean overall zooplankton densities were the lowest observed since 1991. The cause was unclear, but may have been an artifact of human error. It seems unlikely that hydro-operations played a significant part in the reduction of zooplankton in light of the relatively friendly water year of 1998.« less

Annual phytoplankton blooming using satellite-derived chlorophyll-a data around the Vitória-Trindade Chain, Southeastern Brazil

NASA Astrophysics Data System (ADS)

Lemos, A. T.; Ghisolfi, R. D. R.; Mazzini, P. L. F.

2018-06-01

The present study aimed to investigate the influence that four seamounts of the Vitória-Trindade Chain (VTC): the Vitória (VB), Jaseur (JB), Davis (DB) and Dogaressa (DoB) Banks, located on the western South Atlantic Ocean, potentially exert on the annual variability of the chlorophyll-a concentration [Chla] over their summits and surrounding regions. Nine years (January 2003 to December 2011) of monthly and weekly (8-days composite) satellite derived chlorophyll-a concentration, with 4 km spatial resolution were obtained for the study area using the Moderate Resolution Imaging Spectroradiometer (MODIS) aboard NASA's Aqua satellite. For comparison purposes, different time-series were analyzed for both the region over the seamounts and the surrounding waters. A Gaussian model was adjusted to each of the time series of monthly mean chlorophyll-a concentration, and the curve parameters were used in order to objectively characterize the blooms. The results showed that the entire study area (both above and beyond the seamounts) underwent seasonal blooms, with peak of chlorophyll-a occurring around the austral winter (June, July and August), when due to surface cooling the deepening of the surface mixed layer is observed, enriching the photic zone with nutrients. Nevertheless, the peak chlorophyll-a concentration over the shallow seamounts was twice higher than that over deep seamounts or in the adjacent deep ocean. Our results suggest that the presence of these seamounts and their morphological characteristics can significantly impact the primary productivity observed in this region. Thus, the VTC can be divided into areas of diffuse [Chla] (VB and JB), with lower zonal scattering and higher phytoplankton concentrations (DB), and areas distant from the continental shelf and the mesoscale processes that develop there, hence with lower [Chla] (DoB). The profound impact that these seamounts have on the oceanic ecosystem may turn them into becoming true oasis in the oligotrophic deep ocean, supporting higher trophic levels, as well as important fisheries in this region.

Aerobic methane production in surface waters of the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Finke, N.; Crespo-Medina, M.; Schweers, J.; Joye, S. B.

2011-12-01

Near surface water of the global oceans often show elevated methane concentrations compared to the water column below with concentrations in supersaturation in regard to the atmosphere (Lamontagne et al. 1973), resulting in a source of this potent greenhouse gas to the atmosphere. The mechanisms leading to methane supersaturation in surface waters remains unclear. Incubations with Trichodesmium-containing Pacific surface water suggested methylphosphonate as potential methane precursor under phosphate limiting conditions (Karl et al. 2008), whereas in phosphate rich Arctic surface waters, DMSP addition stimulated methane production (Damm et al. 2010). Surface waters of the Gulf of Mexico typically exhibit a methane maximum that is conincident with the deep chlorophyll maximum, below the depths where Trichodesmium is abundant. Addition of methylphosphonate, dimethylsulfoniopropionate (DMSP) or methane thiol (MeSH), the proposed methane precursor in DMSP conversion to methane, to oxic sea water did not affect methane production within the chlorophyll maximum at most stations, whereas methyl phosphonate addition stimulated methane production in the surface water and proposed deep Trichodesmium horizon. Pre-filtration of the water through a 10 μm sieve, which eliminated Trichodesmium, or through a 1.2 μm filter, which eliminated additional cyanobacteria such as Synechococcus, did not reduce methane production. Under dark oxic and dark anoxic conditions, however, methane production was reduced 5 and 7-20 fold, respectively, indicating that anerobic methane production in anoxic microniches is not responsible for the methane production. The reduction of methane production under dark conditions suggests that methane production is, in some yet unrecognized way, linked to phototrophic metabolism. Cyanobacteria are likely not responsible for the observed aerobic methane production in the surface waters of the Gulf of Mexico and while methylphosphonate is a potential precursor in the surface waters, the precursor and methanism of methane production within the coincident deep chlorophyll/methane maximum remains unknown. Lamontagne R, Swinnert J, Linnenbo V, Smith WD (1973) Methane concentrations in various marine environments. Journal of Geophysical Research 78, 5317-5324 Karl DM et al. (2008) Aerobic production of methane in the sea. Nature Geosciences 1, 473-478 Damm E et al. (2010) Methane production in aerobic oligotrophic surface water in the central Arctic Ocean. Biogeosciences 7, 1099-1108

Picophytoplankton physiology and the microbial loop

NASA Astrophysics Data System (ADS)

Stawiarski, Beate

2013-04-01

Physiological observations are needed for a better understanding of the complexity of marine ecosystem processes. This information is important for a better model formulation and parameterisation to identify the consequences of, and feedbacks to, global change and to make future projections. Picophytoplankton form the smallest component of the phytoplankton community (˜ 3μm) and show a substantial contribution to phytoplankton biomass in oligotrophic oceans. Here they also have an important function as primary producers in the microbial loop. They include cyanobacteria, represented by Prochlorococcus and Synechococcus, and picoeukaryotes. The aim of this project is to achieve a better representation of picophytoplankton in the global biogeochemical model PlankTOM 10. PlankTOM 10 simplifies the complex ecosystem into 10 conceptual groups also known as plankton functional types (PFTs). These groups of organisms are defined by physiological and biochemical parameters (6 of phytoplankton, 3 of zooplankton and 1 of bacteria). Furthermore, the question will be addressed, whether picophytoplankton are typical K-strategists with low minimum nutrient and high maximum chlorophyll quota relative to carbon, or by having superior nutrient uptake kinetics and light harvesting (high αChl). Laboratory experiments showed that the smaller picoprokaryotes respond faster to increasing light intensities than their picoeukaryotic counterpart. Preliminary data show that the initial slope of the photosynthesis vs. irradiance curve (αChl) of picoprokaryotes is about 1.5 times higher than of picoeukaryotes. This is consistent with their common distribution at the deep chlorophyll maximum. The maximum chlorophyll quota are not significantly different. Temperature experiments confirmed that the maximum growth rates of picophytoplankton at the optimum temperature (0.47 ± 0.17 d-1 for prokaryotes and 1.05 ± 0.47 d-1 for eukaryotes) are significantly lower than of diatoms (1.57 ± 0.73 d-1, Chollet et al. in prep.) and not significantly different from coccolithophores (0.68 ± 0.10 d-1, Buitenhuis et al. 2008), consistent with the characterisation of picophytoplanton as K-strategists. Their optimum temperatures were found to be 22.7 ± 2.0 ° C for prokaryotes and 23.6 ± 3.1 ° C for eukaryotes. Nutrient limitation experiments will be conducted to characterize the nutrient uptake and elemental composition of picophytoplankton. Finally the results of all experiments will then be used to improve the representation of picophytoplankton in PlankTOM10, evaluated against a recently compiled global database of picophytoplankton biomass.

Interactions of phytoplankton, zooplankton and microorganisms

NASA Astrophysics Data System (ADS)

Pomeroy, L. R.; Paffenhöfer, G.-A.; Yoder, J. A.

We present evidence that there are significant interactions between heterotrophic microorganisms, doliolids and Fritillaria within intrusions of nutrient-rich Gulf Stream water stranding on the continental shelf. During the summer of 1981 cold, nutrient-rich water from below the surface of the Gulf Stream was repeatedly intruded and stranded on the continental shelf off northeastern Florida. On August 6 old, stranded Gulf Stream water depleted of nitrate occupied the lower layer on the outer shelf. The upper water was continental shelf water, older but of undefined age. On August 6 free-living bacteria were >10 6ml -1 everywhere at all depths, an order of magnitude greater than normal bacterial numbers on the northeastern Florida continental shelf. Over 10 days the numbers of free bacteria doubled while bacteria attached to particles increased by a factor of four. The adenylate/chlorophyll ratio showed that phytoplankton dominated the lower layers of intruded water, while the surface water became increasingly dominated by heterotrophic microorganisms (bacteria and protozoa) over 10 days. There were significant, negative correlations between bacteria and doliolids and between bacteria and Fritillaria. Regions of maximum bacterial numbers did not coincide with locations of salp swarms. The increased numbers of bacteria at all depths in a highly stratified system in which most phytoplankton are in the lower layer suggests a diverse source of bacterial growth substrates, some of which involve zooplankton as intermediaries. Production of autotrophs is more than twice that of microheterotrophs on average, but because of their differential distribution, microheterotrophs are the dominant biomass in much of the surface water and may be significant in energy flux to metazoan consumers as well as competitors for mutually useable sources of nutrition.

Basin-scale variability in plankton biomass and community metabolism in the sub-tropical North Atlantic Ocean

NASA Astrophysics Data System (ADS)

Harrison, W. G.; Arístegui, J.; Head, E. J. H.; Li, W. K. W.; Longhurst, A. R.; Sameoto, D. D.

Three trans-Atlantic oceanographic surveys (Nova Scotia to Canary Islands) were carried out during fall 1992 and spring 1993 to describe the large-scale variability in hydrographic, chemical and biological properties of the upper water column of the subtropical gyre and adjacent waters. Significant spatial and temporal variability characterized a number of the biological pools and rate processes whereas others were relatively invariant. Systematic patterns were observed in the zonal distribution of some properties. Most notable were increases (eastward) in mixed-layer temperature and salinity, depths of the nitracline and chlorophyll- a maximum, regenerated production (NH 4 uptake) and bacterial production. Dissolved inorganic carbon (DIC) concentrations, phytoplankton biomass, mesozooplankton biomass and new production (NO 3 uptake) decreased (eastward). Bacterial biomass, primary production, and community respiration exhibited no discernible zonal distribution patterns. Seasonal variability was most evident in hydrography (cooler/fresher mixed-layer in spring), and chemistry (mixed-layer DIC concentration higher and nitracline shallower in spring) although primary production and bacterial production were significantly higher in spring than in fall. In general, seasonal variability was greater in the west than in the east; seasonality in most properties was absent west of Canary Islands (˜20°W). The distribution of autotrophs could be reasonably well explained by hydrography and nutrient structure, independent of location or season. Processes underlying the distribution of the microheterophs, however, were less clear. Heterotrophic biomass and metabolism was less variable than autotrophs and appeared to dominate the upper ocean carbon balance of the subtropical North Atlantic in both fall and spring. Geographical patterns in distribution are considered in the light of recent efforts to partition the ocean into distinct "biogeochemical provinces".

Detection of surface algal blooms using the newly developed algorithm surface algal bloom index (SABI)

NASA Astrophysics Data System (ADS)

Alawadi, Fahad

2010-10-01

Quantifying ocean colour properties has evolved over the past two decades from being able to merely detect their biological activity to the ability to estimate chlorophyll concentration using optical satellite sensors like MODIS and MERIS. The production of chlorophyll spatial distribution maps is a good indicator of plankton biomass (primary production) and is useful for the tracing of oceanographic currents, jets and blooms, including harmful algal blooms (HABs). Depending on the type of HABs involved and the environmental conditions, if their concentration rises above a critical threshold, it can impact the flora and fauna of the aquatic habitat through the introduction of the so called "red tide" phenomenon. The estimation of chlorophyll concentration is derived from quantifying the spectral relationship between the blue and the green bands reflected from the water column. This spectral relationship is employed in the standard ocean colour chlorophyll-a (Chlor-a) product, but is incapable of detecting certain macro-algal species that float near to or at the water surface in the form of dense filaments or mats. The ability to accurately identify algal formations that sometimes appear as oil spill look-alikes in satellite imagery, contributes towards the reduction of false-positive incidents arising from oil spill monitoring operations. Such algal formations that occur in relatively high concentrations may experience, as in land vegetation, what is known as the "red-edge" effect. This phenomena occurs at the highest reflectance slope between the maximum absorption in the red due to the surrounding ocean water and the maximum reflectance in the infra-red due to the photosynthetic pigments present in the surface algae. A new algorithm termed the surface algal bloom index (SABI), has been proposed to delineate the spatial distributions of floating micro-algal species like for example cyanobacteria or exposed inter-tidal vegetation like seagrass. This algorithm was specifically modelled to adapt to the marine habitat through its inclusion of ocean-colour sensitive bands in a four-band ratio-based relationship. The algorithm has demonstrated high stability against various environmental conditions like aerosol and sun glint.

Phytomonitoring of air pollution around a thermal power plant

NASA Astrophysics Data System (ADS)

Agrawal, M.; Agrawal, S. B.

This study was undertaken in order to assess the impact of air pollutants on vegetation around Obra thermal power plant (1550 M W capacity) in the Mirzapur district of Uttar Pradesh. For this purpose, Mangifera indica, Citrus medico and Bouganvillaea spectabilis plants, most common at all sites, were selected as test plants. Five study sites were selected northeast (prevailing wind) of the thermal power plant. A control site was also selected at a distance of 30 km north of Obra. Responses of plants to pollutants in terms of presence of foliar injury symptoms and changes in chlorophyll, ascorbic acid and S content were measured. These changes were correlated with ambient SO 2 and suspended particulate matter (SPM) concentrations and the amount of dust settled on leaf surfaces. The SO 2 and SPM concentrations were quite high in the immediate vicinity of the power plant. There also exists a direct relationship between the concentration of SPM in air and amount of dust deposited on leaf surfaces. Maximum dust deposition was observed on M. indica plants. The levels of foliar injury, chlorophyll and ascorbic acid were found to decrease and that of S increase in plants around the power plant in comparison to those growing at a control site. The magnitude of such changes was maximum in M. indica and minimum in C. medica. A species specific direct relationship between the increase in the amount of S and decrease in chlorophyll content was observed. The study suggests that differential sensitivity of plants to SO 2 may be used in evaluating the air pollution impact around emission sources and M. indica plants can be used as an indicator plant for quantifying biological changes.

Autonomous gliders reveal features of the water column associated with foraging by adelie penguins.

PubMed

Kahl, L Alex; Schofield, Oscar; Fraser, William R

2010-12-01

Despite their strong dependence on the pelagic environment, seabirds and other top predators in polar marine ecosystems are generally studied during their reproductive phases in terrestrial environments. As a result, a significant portion of their life history is understudied which in turn has led to limited understanding. Recent advances in autonomous underwater vehicle (AUV) technologies have allowed satellite-tagged Adélie penguins to guide AUV surveys of the marine environment at the Palmer Long-Term Ecological Research (LTER) site on the western Antarctic Peninsula. Near real-time data sent via Iridium satellites from the AUVs to a centralized control center thousands of miles away allowed scientists to adapt AUV sampling strategies to meet the changing conditions of the subsurface. Such AUV data revealed the water masses and fine-scale features associated with Adélie penguin foraging trips. During this study, the maximum concentration of chlorophyll was between 30 and 50 m deep. Encompassing this peak in the chlorophyll concentration, within the water-column, was a mixture of nutrient-laden Upper Circumpolar Deep (UCDW) and western Antarctic Peninsula winter water (WW). Together, data from the AUV survey and penguin dives reveal that 54% of foraging by Adélie penguins occurs immediately below the chlorophyll maximum. These data demonstrate how bringing together emerging technologies, such as AUVs, with established methods such as the radio-tagging of penguins can provide powerful tools for monitoring and hypothesis testing of previously inaccessible ecological processes. Ocean and atmosphere temperatures are expected to continue increasing along the western Antarctic Peninsula, which will undoubtedly affect regional marine ecosystems. New and emerging technologies such as unmanned underwater vehicles and individually mounted satellite tracking devices will provide the tools critical to documenting and understanding the widespread ecological change expected in polar regions.

Impact of elevated temperatures on specific leaf weight, stomatal density, photosynthesis and chlorophyll fluorescence in soybean.

PubMed

Jumrani, Kanchan; Bhatia, Virender Singh; Pandey, Govind Prakash

2017-03-01

High-temperature stress is a major environmental stress and there are limited studies elucidating its impact on soybean (Glycine max L. Merril.). The objectives of present study were to quantify the effect of high temperature on changes in leaf thickness, number of stomata on adaxial and abaxial leaf surfaces, gas exchange, chlorophyll fluorescence parameters and seed yield in soybean. Twelve soybean genotypes were grown at day/night temperatures of 30/22, 34/24, 38/26 and 42/28 °C with an average temperature of 26, 29, 32 and 35 °C, respectively, under greenhouse conditions. One set was also grown under ambient temperature conditions where crop season average maximum, minimum and mean temperatures were 28.0, 22.4 and 25.2 °C, respectively. Significant negative effect of temperature was observed on specific leaf weight (SLW) and leaf thickness. Rate of photosynthesis, stomatal conductance and water use efficiency declined as the growing temperatures increased; whereas, intercellular CO 2 and transpiration rate were increased. With the increase in temperature chlorophyll fluorescence parameters such as Fv/Fm, qP and PhiPSII declined while there was increase in qN. Number of stomata on both abaxial and adaxial surface of leaf increased significantly with increase in temperatures. The rate of photosynthesis, PhiPSII, qP and SPAD values were positively associated with leaf thickness and SLW. This indicated that reduction in photosynthesis and associated parameters appears to be due to structural changes observed at higher temperatures. The average seed yield was maximum (13.2 g/pl) in plants grown under ambient temperature condition and declined by 8, 14, 51 and 65% as the temperature was increased to 30/22, 34/24, 38/26 and 42/28 °C, respectively.

The biological pump: Profiles of plankton production and consumption in the upper ocean

NASA Astrophysics Data System (ADS)

Longhurst, Alan R.; Glen Harrison, W.

The ‘biological pump’ mediates flux of carbon to the interior of the ocean by interctions between the components of the vertically-structured pelagic ecosystem of the photic zone. Chlorophyll profiles are not a simple indicator of autotrophic biomass or production, because of non-linearities in the physiology of cells and preferential vertical distribution of taxa. Profiles of numbers or biomass of heterotrophs do not correspond with profiles of consumption, because of depth-selection (taxa, seasons) for reasons unconnected with feeding. Depths of highest plant biomass, chlorophyll and growth rate coincide when these depths are shallow, but become progressively separated in profiles where they are deeper - so that highest growth rate lies progressively shallower than the chloropyll maximum. It is still uncertain how plant biomass is distributed in deep profiles. Depths of greatest heterotroph biomass (mesozooplankton) are usually close to depths of fastest plant growth rate, and thus lie shallower than the chlorophyll maximum in profiles where this itself is deep. This correlation is functional, and relates to the role of heterotrophs in excreting metabolic wastes (especially ammonia), which may fuel a significant component of integrated algal production, especially in the oligotrophic ocean. Some, but not all faecal material from mesozooplankton of the photic zone appears in vertical flux below the pycnocine, depending on the size of the source organisms, and the degree of vertical mixing above the pycnocline. Diel, but probably not seasonal, vertical migration is significant in the vertical flux of dissolved nitrogen. Regional generalisations of the vertical relations of the main components of the ‘biological pump’ now appear within reach, and an approach is suggested.

Suspended-Sediment Impacts on Light-limited Productivity in the Delaware Estuary

NASA Astrophysics Data System (ADS)

McSweeney, J.; Chant, R. J.; Wilkin, J.; Sommerfield, C. K.

2016-12-01

The Delaware Estuary has a history of high anthropogenic nutrient loadings, but has been classified as a high-nutrient, low-growth system due persistent light limitations caused by turbidity. While the biogeochemical implications of light limitation in turbid estuaries has been well-studied, there has been minimal effort focused on the connectivity between hydrodynamics, sediment dynamics, and light-limitation. Our understanding of sediment dynamics in the Delaware Estuary has advanced significantly in the last decade, and this study provides insight about how the spatiotemporal variability of the estuarine turbidity maximum controls the light available for primary productivity. This analysis uses data from eight along-estuary cruises from March, June, September, and December 2010 and 2011 to look at the seasonality of suspended sediment and chlorophyll distributions. By estimating the absorption due to sediment under a range of environmental conditions, we describe how the movement of the turbidity maximum affects light availability. We also use an idealized 2-dimensional Regional Ocean Modeling System (ROMS) numerical model to evaluate how river discharge and spring-neap variability modulate the location of phytoplankton blooms. We conclude that high river flows and neap tides can drive stratification that is strong enough to prevent sediment from being resuspended into the surface layer, thus providing light conditions favorable for primary productivity. This study sheds light on the importance of sediment in the limiting primary productivity, and the role of stratification in promoting production, highlighting the potential limitations of biogeochemical models that do not account for sediment absorption.

Bacterial Diversity in the South Adriatic Sea during a Strong, Deep Winter Convection Year

PubMed Central

Korlević, M.; Pop Ristova, P.; Garić, R.; Amann, R.

2014-01-01

The South Adriatic Sea is the deepest part of the Adriatic Sea and represents a key area for both the Adriatic Sea and the deep eastern Mediterranean. It has a role in dense water formation for the eastern Mediterranean deep circulation cell, and it represents an entry point for water masses originating from the Ionian Sea. The biodiversity and seasonality of bacterial picoplankton before, during, and after deep winter convection in the oligotrophic South Adriatic waters were assessed by combining comparative 16S rRNA sequence analysis and catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH). The picoplankton communities reached their maximum abundance in the spring euphotic zone when the maximum value of the chlorophyll a in response to deep winter convection was recorded. The communities were dominated by Bacteria, while Archaea were a minor constituent. A seasonality of bacterial richness and diversity was observed, with minimum values occurring during the winter convection and spring postconvection periods and maximum values occurring under summer stratified conditions. The SAR11 clade was the main constituent of the bacterial communities and reached the maximum abundance in the euphotic zone in spring after the convection episode. Cyanobacteria were the second most abundant group, and their abundance strongly depended on the convection event, when minimal cyanobacterial abundance was observed. In spring and autumn, the euphotic zone was characterized by Bacteroidetes and Gammaproteobacteria. Bacteroidetes clades NS2b, NS4, and NS5 and the gammaproteobacterial SAR86 clade were detected to co-occur with phytoplankton blooms. The SAR324, SAR202, and SAR406 clades were present in the deep layer, exhibiting different seasonal variations in abundance. Overall, our data demonstrate that the abundances of particular bacterial clades and the overall bacterial richness and diversity are greatly impacted by strong winter convection. PMID:25548042

The timing and the magnitude of spring phytoplankton blooms and their relationship with physical forcing in the central Yellow Sea in 2009

NASA Astrophysics Data System (ADS)

Zhou, Feng; Xuan, Jiliang; Huang, Daji; Liu, Chenggang; Sun, Jun

2013-12-01

The development of phytoplankton bloom and its association with physical forcing is examined through an interdisciplinary field-work conducted in the vicinity of the central trough of the southern Yellow Sea during March-April 2009, with the aid of a surface Lagrangian drifter deployed at the bloom site. Bloom patches were detected using an empirical value and two of them were traced by the drifter for a period of several days respectively. Both of them appears as thin-layer subsurface chlorophyll a maximum (SCM) throughout the tracing, although their dominant phytoplankton species are not identical at all. The magnitude as well as the onset of these two blooms is different from each other, but both found to be relevant to local oceanic and meteorological conditions. Both of them demonstrate that the changes in the stability of hydrographical structure, especially at layers around the SCM, take a substantial role in triggering or terminating the blooming processes. Those changes in meteorological conditions, like wind speed and directions, solar radiation, are short and cause daily or synoptic scale variations in phytoplankton concentrations, but the frequency of northerly wind events predating the bloom season has a positive effect on the occurrence of spring blooms. The horizontal advection is another contributing factor indicated by the drifter which accounts for the bloom extinction at the station B20. In addition, due to the weak orbital horizontal movement, the bloom above the central trough persists longer and larger.

The optical and physiological properties of phytoplankton - base of model for estimation of primary production in the sea from satellite data.

NASA Astrophysics Data System (ADS)

Finenko, Z. Z.; Churilova, T. Ya.

An assessment of the spatial and temporal variation in the photo physiological parameters and chlorophyll-specific absorption coefficients of marine phytoplankton is essential for estimate of global primary production by satellite data. Relationships of photosynthesis rate on light intensity have been used for estimation of two photosynthetic parameters of phytoplankton in the Black Sea: light saturated photosynthesis intensity (Pb/max, mgC mg Chl-1 h-1) and photosynthesis efficiency (alpha/b mgC mg Chl -1 h-1/ W m-2). The results have shown that variability of photosynthetic parameters of surface phytoplankton during the year varied by one order of values: Pb/max - from 1 to 11 mg C mg Chl-1 h-1 and (alpha/b - from 0.04 to 0.35 mg C mg Chl-1 h-1/Wm-2. Temporal dynamics was characterised by increasing of the values from winter to summer and decreasing to the end of the year. The vertical profiles of Pb/max and alpha/b had opposite character of change: values of Pb/max decreased with depth, alpha/b - increased. Photosynthetic parameters changed with depth more significantly at time of stratification, than - without stratification. The influence of temperature, nitrate concentration and light intensity on Pb/max rather evidence, but temperature and optical depth effect on Pb/max more significantly. Depth-dependent variability of photosynthesis efficiency is generally effected of nutrient concentration. Vertical uniformity of maximum quantum yield of photosynthesis (Fm) and spectral mean absorption coefficient of phytoplankton (aph) in euphotic zone were obtained for cold period of year. In summer - Fm increased from surface to bottom of euphotic zone, aph - decrease. Fm and aph values of surface phytoplankton depended on chlorophyll concentration but their changes had opposite direction: Fm - increased and aph - decreased when chlorophyll concentration grew. As a result Pb/max = Z Fm aph Ik T and alpha/b = Z Fm aph T (where Z - a dimensional constant equal to the atomic mass of carbon, Ik - the photon flux density at which photosynthesis rate becomes light saturated, (mol photons m-2 s-1; T - a constant value for transition from seconds by one hour) change in 2-3 times for the range of chlorophyll concentration (0.05-10.0 mg m-3 ). Pb/max and alpha/b have been approximated by one-peaked curve with maximum at 3 mg m -3 Chl a concentration. These relationships could be used for modeling of Pb/max and alpha/b based on surface chlorophyll concentrations from satellite colour images.

[Investigation of exciting light and plant leaves age effects on chlorophyll fluorescense of radish plants].

PubMed

Nesterenko, T V; Tikhomirov, A A; Shikhov, V N

2012-01-01

The effect of exciting light intensity and leaves age on characteristics of slow stage of chlorophyll fluorescence induction (CFI) of radish leaves has been investigated. Light dependence of the relationship of maximum fluorescence intensity in the peak P and the stationary fluorescence level (F(P)/F(S)) and also light dependence of temporal characteristics of CFI (T0.5 - half decrease of chlorophyll fluorescence intensity during slow stage of fluorescence induction and tmin - summarized CFI characteristics derived by calculating via integral proportional to variable part of illuminated in the result of chlorophyll fluorescence energy during slow stage of CFI) have been studied. Plants were grown in controlled conditions of light culture at 100 Wt/m2 of photosynthetic active radiation (PAR). It has been shown that variability of the characteristics under study, associated with the effect of leaves age, significantly decreases at exciting light intensity equal to 40 Wt/m2 of PAR and more. The lowest effect of leaves age on the value of fluorescence characteristics for T0.5 and tmin and also for F(P)/F(S) ratio was observed at the intensity of exciting fluorescence light of 60 Wt/m2 of PAR. In the researched range of light intensities the temporal characteristics of T0.5 and tmin for uneven-aged radish leaves appeared to be by an order less responsive to the intensity changes of exciting fluorescence light as compared with F(P)/F(S) ratio.

Oceanographic features in the lee of the windward and leeward islands: ERTS and ship data

NASA Technical Reports Server (NTRS)

Hanson, K. J.; Hebard, F.; Cram, R.

1973-01-01

Analysis of the ERTS data in portions of the eastern Caribbean are presented for October 1972 showing features which are, as yet, not explained. Ground truth data obtained in that area during November 1972 are presented. These include vertical temperature structure in the mixed layer and thermocline, and surface measurements of salinity, temperature, and chlorophyll.

Relationship Between Physical and Biological Properties on the Microscale: A Cross-Comparison Between Differing Coastal Domains

DTIC Science & Technology

2013-09-01

persistent layers of particulate matter (defined by turbidity or chlorophyll ); DISTRIBUTION STATEMENT A. Approved for public release; distribution... black line) for data presented in Fig. 1 and averaged along isopycnals. 2013 Figure 3: Histogram showing the statistical differences in mixing...mean. 3 SIGNIFICANCE Attenuation of light and sound propagation in the upper

Biomonitoring chromium III or VI soluble pollution by moss chlorophyll fluorescence.

PubMed

Chen, Yang-Er; Mao, Hao-Tian; Ma, Jie; Wu, Nan; Zhang, Chao-Ming; Su, Yan-Qiu; Zhang, Zhong-Wei; Yuan, Ming; Zhang, Huai-Yu; Zeng, Xian-Yin; Yuan, Shu

2018-03-01

We systematically compared the impacts of four Cr salts (chromic chloride, chromic nitrate, potassium chromate and potassium bichromate) on physiological parameters and chlorophyll fluorescence in indigenous moss Taxiphyllum taxirameum. Among the four Cr salts, K 2 Cr 2 O 7 treatment resulted in the most significant decrease in photosynthetic efficiency and antioxidant enzymes, increase in reactive oxygen species (ROS), and obvious cell death. Different form the higher plants, although hexavalent Cr(VI) salt treatments resulted in higher accumulation levels of Cr and were more toxic than Cr(III) salts, Cr(III) also induced significant changes in moss physiological parameters and chlorophyll fluorescence. Our results showed that Cr(III) and Cr(VI) could be monitored distinguishably according to the non-photochemical quenching (NPQ) fluorescence of sporadic purple and sporadic lavender images respectively. Then, the valence states and concentrations of Cr contaminations could be evaluated according to the image of maximum efficiency of PSII photochemistry (Fv/Fm) and the quantum yield of PSII electron transport (ΦPSII). Therefore, this study provides new ideas of moss's sensibility to Cr(III) and a new method to monitor Chromium contaminations rapidly and non-invasively in water. Copyright © 2017 Elsevier Ltd. All rights reserved.

Water-quality conditions near the confluence of the Snake and Boise Rivers, Canyon County, Idaho

USGS Publications Warehouse

Wood, Molly S.; Etheridge, Alexandra

2011-01-01

Total Maximum Daily Loads (TMDLs) have been established under authority of the Federal Clean Water Act for the Snake River-Hells Canyon reach, on the border of Idaho and Oregon, to improve water quality and preserve beneficial uses such as public consumption, recreation, and aquatic habitat. The TMDL sets targets for seasonal average and annual maximum concentrations of chlorophyll-a at 14 and 30 micrograms per liter, respectively. To attain these conditions, the maximum total phosphorus concentration at the mouth of the Boise River in Idaho, a tributary to the Snake River, has been set at 0.07 milligrams per liter. However, interactions among chlorophyll-a, nutrients, and other key water-quality parameters that may affect beneficial uses in the Snake and Boise Rivers are unknown. In addition, contributions of nutrients and chlorophyll-a loads from the Boise River to the Snake River have not been fully characterized. To evaluate seasonal trends and relations among nutrients and other water-quality parameters in the Boise and Snake Rivers, a comprehensive monitoring program was conducted near their confluence in water years (WY) 2009 and 2010. The study also provided information on the relative contribution of nutrient and sediment loads from the Boise River to the Snake River, which has an effect on water-quality conditions in downstream reservoirs. State and site-specific water-quality standards, in addition to those that relate to the Snake River-Hells Canyon TMDL, have been established to protect beneficial uses in both rivers. Measured water-quality conditions in WY2009 and WY2010 exceeded these targets at one or more sites for the following constituents: water temperature, total phosphorus concentrations, total phosphorus loads, dissolved oxygen concentration, pH, and chlorophyll-a concentrations (WY2009 only). All measured total phosphorus concentrations in the Boise River near Parma exceeded the seasonal target of 0.07 milligram per liter. Data collected during the study show seasonal differences in all measured parameters. In particular, surprisingly high concentrations of chlorophyll-a were measured at all three main study sites in winter and early spring, likely due to changes in algal populations. Discharge conditions and dissolved orthophosphorus concentrations are key drivers for chlorophyll-a on a seasonal and annual basis on the Snake River. Discharge conditions and upstream periphyton growth are most likely the key drivers for chlorophyll-a in the Boise River. Phytoplankton growth is not limited or driven by nutrient availability in the Boise River. Lower discharges and minimal substrate disturbance in WY2010 in comparison with WY2009 may have caused prolonged and increased periphyton and macrophyte growth and a reduced amount of sloughed algae in suspension in the summer of WY2010. Chlorophyll-a measured in samples commonly is used as an indicator of sestonic algae biomass, but chlorophyll-a concentrations and fluorescence may not be the most appropriate surrogates for algae growth, eutrophication, and associated effects on beneficial uses. Assessment of the effects of algae growth on beneficial uses should evaluate not only sestonic algae, but also benthic algae and macrophytes. Alternatively, continuous monitoring of dissolved oxygen detects the influence of aquatic plant respiration for all types of algae and macrophytes and is likely a more direct measure of effects on beneficial uses such as aquatic habitat. Most measured water-quality parameters in the Snake River were statistically different upstream and downstream of the confluence with the Boise River. Higher concentrations and loads were measured at the downstream site (Snake River at Nyssa) than the upstream site (Snake River near Adrian) for total phosphorus, dissolved orthophosphorus, total nitrogen, dissolved nitrite and nitrate, suspended sediment, and turbidity. Higher dissolved oxygen concentrations and pH were measured at the upstream site (Snake River near Adrian) than the downstream site (Snake River at Nyssa). Contributions from the Boise River measured at Parma do not constitute all of the increase in nutrient and sediment loads in the Snake River between the upstream and downstream sites. Surrogate models were developed using a combination of continuously monitored variables to estimate concentrations of nutrients and suspended sediment when samples were not possible. The surrogate models explained from 66 to 95 percent of the variability in nutrient and suspended sediment concentrations, depending on the site and model. Although the surrogate models could not always represent event-based changes in modeled parameters, they generally were successful in representing seasonal and annual patterns. Over a longer period, the surrogate models could be a useful tool for measuring compliance with state and site-specific water-quality standards and TMDL targets, for representing daily and seasonal variability in constituents, and for assessing effects of phosphorus reduction measures within the watershed.

Biomass and productivity of three phytoplankton size classes in San Francisco Bay.

USGS Publications Warehouse

Cole, B.E.; Cloern, J.E.; Alpine, A.E.

1986-01-01

The 5-22 mu m size accounted for 40-50% of annual production in each embayment, but production by phytoplanton >22 mu m ranged from 26% in the S reach to 54% of total phytoplankton production in the landward embayment of the N reach. A productivity index is derived that predicts daily productivity for each size class as a function of ambient irradiance and integrated chlorophyll a in the photic zone. For the whole phytoplankton community and for each size class, this index was constant at approx= 0.76 g C m-2 (g chlorophyll a Einstein)-1. The annual means of maximum carbon assimilation numbers were usually similar for the three size classes. Spatial and temporal variations in size-fractionated productivity are primarily due to differences in biomass rather than size-dependent carbon assimilation rates. -from Authors

Ultrasound-assisted extraction of bioactive compounds from lemon balm and peppermint leaves

NASA Astrophysics Data System (ADS)

Šic Žlabur, Jana; Voća, Sandra; Dobričević, Nadica; Pliestić, Stjepan; Galić, Ante; Boričević, Ana; Borić, Nataša

2016-01-01

The aim of this study was to investigate the influence of conventional and ultrasound-assisted extraction (frequency, time, temperature) on the content of bioactive compounds as well as on the antioxidant activity of aqueous extracts from fresh lemon balm and peppermint leaves. Total phenols, flavonoids, non-flavonoids, total chlorophylls, total carotenoids, and radical scavenging capacity were determined. Moreover, the relationship between bioactive compounds and antioxidant capacity was studied by linear regression. A significant increase in all studied bioactive compounds during ultrasonic extraction for 5 to 20 min was found. With the classical extraction method, the highest amounts of total phenols, flavonoids, and antioxidant activity were determined, and the maximum amounts of total chlorophylls and carotenoids were determined during 20 min ultrasonic extraction. The correlation analysis revealed a strong, positive relationship between antioxidant activity and total phenolic compounds.

[Cold resistance of four evergreen broad-leaved tree species].

PubMed

Wang, Na; Wang, Kui Ling; Liu, Qing Hua; Liu, Qing Chao

2016-10-01

The leaves of four evergreen plants, i.e., Fatsia japonica, Nerium indicum, Mahonia bealei and Acer cinnamomifolium were used as the experimental materials. By measuring the changes of in vitro leaf in soluble sugar, soluble protein, free proline, POD activity, chlorophyll content and relative electrolytic conductivity under aritificial simulated low temperature, combining the measurements of SPAD, leaf surface features and anatomical changes in organizational structure in the process of natural wintering, the cold resistance of four evergreen tree species was evaluated comprehensively. The results showed that in the process of artificial low temperature stress, the chlorophyll content of the leaves of four evergreen species decreased, the content of soluble protein pea-ked at -20 ℃, and the soluble sugar, free proline, POD activity and relative electrolytic conductivity showed an overall upward trend. The semilethal temperatures of four species were -8.0, -13.4, -19.4 and -14.8 ℃, respectively. During the winter, the leaf SPAD of the four species changed markedly, reflecting that the change of relative chlorophyll content was related to the change of temperature. Meanwhile, the leaf thickness, cutin layer thickness, stockade tissue thickness and tightness of four species increased and the plasmolysis occurred thereafter. Also the content of starch grains and calcium oxalate cluster crystal increased. The typical stomatal pits and the intensive non-glandular trichome within the pits of N. indicum and the sclerenchyma of M. Bealei could improve the cold resistance of plants to some extent. In addition, the phenomena like the breakage of wax layer in leaf surface, the fracture of epidermal hair and the deformation of palisade tissue indicated that plants were damaged to a certain extent by low temperature.

Significance of the Autumn Bloom within the Seasonal Cycle of Primary Production in a Temperate Continental Shelf Sea

NASA Astrophysics Data System (ADS)

Wihsgott, Juliane U.; Sharples, Jonathan; Hopkins, Joanne; Woodward, Malcolm; Greenwood, Naomi; Sivyer, Dave; Hull, Tom

2017-04-01

Autumnal phytoplankton blooms are considered characteristic features of the seasonal cycle of primary productivity in most temperate and subpolar oceans. While observations of their occurrence and strength have been documented extensively, their significance within the seasonal cycle of primary production is not well quantified. Our aim is to establish the role the autumn bloom plays within the seasonal cycle and estimate its contribution to the annual primary production of a temperate continental shelf. In particular, we will illustrate that the autumn bloom has the potential to be as productive as the well-studied summer sub-surface chlorophyll maximum (SCM) and the capacity to significantly contribute to the drawdown of atmospheric CO2. We do this by combining long-term, high resolution observations of water column structure, meteorological forcing, nitrate and chlorophyll fluorescence over the entire seasonal cycle observed in a temperate shelf sea. We present a new series of continuous measurements spanning 17 months (March 2014 - July 2015), which were collected in a temperate shelf sea on the North West European Shelf. A long-term mooring array recorded full depth vertical density structure, dynamics and meteorological data as well as surface chlorophyll fluorescence biomass and inorganic nutrient data over a full seasonal cycle at a station 120 km north-east from the continental shelf break. Eight process cruises supplied additional full depth profiles of chlorophyll fluorescence biomass and macronutrients. The breakdown of stratification in 2014 commenced in early October due to increased winds compared to summer months, and a predominantly negative net heat flux (the ocean lost heat to the overlying atmosphere). Vertical mixing in autumn not only transformed the vertical density structure but also the vertical structure of chlorophyll biomass and surface nutrients. The SCM became eroded and instead a vertically homogeneous profile of chlorophyll biomass established itself above the pycnocline. This increased mixing also led to replenishment of surface nutrients and drove enhanced growth, which was almost 4 times stronger than observed during the summer months: We find an increase in depth integrated chlorophyll biomass of ˜50 mg m-2 in autumn 2014 compared to values of ˜20 mg m-2 during the summers of 2014 and 2015.

Seasonal variation of zooplankton abundance and community structure in Prince William Sound, Alaska, 2009-2016

NASA Astrophysics Data System (ADS)

McKinstry, Caitlin A. E.; Campbell, Robert W.

2018-01-01

Large calanoid copepods and other zooplankters comprise the prey field for ecologically and economically important predators such as juvenile pink salmon, herring, and seabirds in Prince William Sound (PWS).​ From 2009-2016, the Gulf Watch Alaska program collected zooplankton 5-10 times each year at 12 stations in PWS to establish annual patterns. Surveys collected 188 species of zooplankton with Oithona similis, Limacina helicina, Pseudocalanus spp., and Acartia longiremis as the most common species present in 519 samples. Generalized additive models assessed seasonal abundance and showed peak abundance in July (mean: 9826 no. m-3 [95% CI: 7990-12,084]) and lowest abundance in January (503 no. m-3 [373 to 678]). Significantly higher zooplankton abundance occurred in 2010 (542 no. m-3 ± 55 SE) and lowest in 2013 (149 no. m-3 ± 13). The species composition of communities, determined via hierarchical cluster analysis and indicator species analysis, produced six distinct communities based on season and location. The winter community, characterized by warm-water indicator species including Mesocalanus tenuicornis, Calanus pacificus, and Corycaeus anglicus, diverged into four communities throughout the spring and summer. The first spring community, characterized by copepods with affinities for lower salinities, occurred sound-wide. The second spring community, comprised of planktonic larvae, appeared sporadically in PWS bays in 2011-2013. Spring and summer open water stations were defined by the presence of large calanoid copepods. A summer community including the most abundant taxa was common in 2010 and 2011, absent in 2013, then sporadically appeared in 2014 and 2015 suggesting interannual variability of zooplankton assemblages. The zooplankton community shifted to a uniform assemblage characterized by cnidarians in the early autumn. Community assemblages showed significant correlations to a set of environmental variables including SST, mixed layer depth, location, depth of chlorophyll-a max, mixed layer average salinity, chlorophyll-a maximum, and bottom depth (ρ = 0.24, p < 0.05). The disappearance of the summer community coincided with the appearance of the Gulf of Alaska warm water anomaly known as "The Blob". A shift in zooplankton community composition during critical grazing periods for predators such as juvenile Pacific herring (Clupea pallasi) could have energetic consequences for overwintering success.

An improved ENSO simulation by representing chlorophyll-induced climate feedback in the NCAR Community Earth System Model.

PubMed

Kang, Xianbiao; Zhang, Rong-Hua; Gao, Chuan; Zhu, Jieshun

2017-12-07

The El Niño-Southern oscillation (ENSO) simulated in the Community Earth System Model of the National Center for Atmospheric Research (NCAR CESM) is much stronger than in reality. Here, satellite data are used to derive a statistical relationship between interannual variations in oceanic chlorophyll (CHL) and sea surface temperature (SST), which is then incorporated into the CESM to represent oceanic chlorophyll -induced climate feedback in the tropical Pacific. Numerical runs with and without the feedback (referred to as feedback and non-feedback runs) are performed and compared with each other. The ENSO amplitude simulated in the feedback run is more accurate than that in the non-feedback run; quantitatively, the Niño3 SST index is reduced by 35% when the feedback is included. The underlying processes are analyzed and the results show that interannual CHL anomalies exert a systematic modulating effect on the solar radiation penetrating into the subsurface layers, which induces differential heating in the upper ocean that affects vertical mixing and thus SST. The statistical modeling approach proposed in this work offers an effective and economical way for improving climate simulations.

The Arabian Sea as a high-nutrient, low-chlorophyll region during the late Southwest Monsoon

NASA Astrophysics Data System (ADS)

Naqvi, S. W. A.; Moffett, J. W.; Gauns, M. U.; Narvekar, P. V.; Pratihary, A. K.; Naik, H.; Shenoy, D. M.; Jayakumar, D. A.; Goepfert, T. J.; Patra, P. K.; Al-Azri, A.; Ahmed, S. I.

2010-01-01

Extensive observations during the late Southwest Monsoon of 2004 over the Indian and Omani shelves, and along an east-west transect reveal a mosaic of biogeochemical provinces including an unexpected high-nutrient, low-chlorophyll condition off the southern Omani coast. This feature, coupled with other characteristics of the system, suggest a close similarity between the Omani upwelling system and the Peruvian and California upwelling systems, where primary production (PP) is limited by iron. An intensification of upwelling, reported to have been caused by the decline in the winter/spring Eurasian snow cover since 1997, is not supported by in situ hydrographic and chlorophyll measurements as well as a reanalysis of ocean colour data extending to 2009. Iron limitation of PP may complicate simple relationship between upwelling and PP assumed by previous workers, and contribute to the anomalous offshore occurrence of the most severe oxygen (O2) depletion in the region. Over the Indian shelf, affected by very shallow O2-deficient zone, high PP is restricted to a thin, oxygenated surface layer probably due to unsuitability of the O2-depleted environment for the growth of oxygenic photosynthesizers.

Relationship between Chlorophyll a Concentration, Light Attenuation and Diving Depth of the Southern Elephant Seal Mirounga leonina

PubMed Central

Jaud, Thomas; Dragon, Anne-Cécile; Garcia, Jade Vacquie; Guinet, Christophe

2012-01-01

Recently, a number of Antarctic marine environmental studies have used oceanographic parameters collected from instrumented top predators for ecological and physical information. Phytoplankton concentration is generally quantified through active measurement of chlorophyll fluorescence. In this study, light absorption coefficient (K0.75) was used as an indicator of phytoplankton concentration. This measurement, easy to obtain and requiring low electric power, allows for assessing of the fine scale horizontal structuring of phytoplankton. As part of this study, Southern elephant seals (SES) were simultaneously equipped with a fluorometer and a light logger. Along the SES tracks, variations in K0.75 were strongly correlated with chlorophyll, a concentration measured by the fluorometer within the euphotic layer. With regards to SES foraging behaviour, bottom depth of the seal’s dive was highly dependent on light intensity at 150 m, indicating that the vertical distribution of SES’s prey such as myctophids is tightly related to light level. Therefore, change in phytoplankton concentration may not only have a direct effect on SES’s prey abundance but may also determine their vertical accessibility with likely consequences on SES foraging efficiency. PMID:23082166

A comparison of ship and Coastal Zone Color Scanner mapped distribution of phytoplankton in the southeastern Bering Sea

NASA Technical Reports Server (NTRS)

Mcclain, C. R.; Sambrotto, R. N.; Ray, G. C.; Muller-Karger, F. E.

1990-01-01

Twenty-one Coastal Zone Color Scanner (CZCS) images of the southeastern Bering Sea are examined in order to map the near-surface distribution of phytoplankton during 1979 and 1980. The information is compared with the mesoscale (100-1000 km) distribution of phytoplankton inferred from pooled ship sampling obtained during the Processes and Resources of the Bering Shelf (PROBES) intensive field study during the late 1970s and early 1980s. The imagery indicates that open-water phytoplankton blooms occur first in late April in coastal waters, peak in early May over the middle shelf, and decay rapidly afterwards, reaching concentration minima in June in both regions. These patterns show that the earlier ship observations are valid for most of the eastern Bering shelf. A very tight correlation is found between the PROBES surface chlorophyll a concentrations and mean mixed-layer chlorophyll concentrations. The significant discrepancies between CZCS and ship-based chlorophyll estimates may be due to aliasing in time by the CZCS. It is concluded that neither satellite nor ship alone can do an adequate job of characterizing the physics or biological dynamics of the ocean.

Physical forcing of late summer chlorophyll a blooms in the oligotrophic eastern North Pacific

NASA Astrophysics Data System (ADS)

Toyoda, Takahiro; Okamoto, Suguru

2017-03-01

We investigated physical forcing of late summer chlorophyll a (chl a) blooms in the oligotrophic eastern North Pacific Ocean by using ocean reanalysis and satellite data. Relatively large chl a blooms as defined in this study occurred in August-October following sea surface temperature (SST) anomaly (SSTA) decreases, mixed layer deepening, and temperature and salinity increases at the bottom of the mixed layer. These physical conditions were apparently induced by the entrainment of subsurface water resulting from the destabilization of the surface layer caused by anomalous northward Ekman transport of subtropical waters of higher salinity. Salinity-normalized total alkalinity data provide supporting evidence for nutrient supply by the entrainment process. We next investigated the impact of including information about the entrainment on bloom identification. The results of analyses using reanalysis data and of those using only satellite data showed large SSTA decreases when the northward Ekman salinity transports were large, implying that the entrainment of subsurface water is well represented in both types of data. After surface-destabilizing conditions were established, relatively high surface chl a concentrations were observed. The use of SST information can further improve the detection of high chl a concentrations. Although the detection of high chl a concentrations would be enhanced by finer data resolution and the inclusion of biogeochemical parameters in the ocean reanalysis, our results obtained by using existing reanalysis data as well as recent satellite data are valuable for better understanding and prediction of lower trophic ecosystem variability.

NASA Blue Marble 2007 West

NASA Image and Video Library

2010-03-12

RELEASE DATE: OCTOBER 9, 2007 Credit: NASA/Goddard Space Flight Center/Reto Stöckli A day’s clouds. The shape and texture of the land. The living ocean. City lights as a beacon of human presence across the globe. This amazingly beautiful view of Earth from space is a fusion of science and art, a showcase for the remote-sensing technology that makes such views possible, and a testament to the passion and creativity of the scientists who devote their careers to understanding how land, ocean, and atmosphere—even life itself—interact to generate Earth’s unique (as far as we know!) life-sustaining environment. Drawing on data from multiple satellite missions (not all collected at the same time), a team of NASA scientists and graphic artists created layers of global data for everything from the land surface, to polar sea ice, to the light reflected by the chlorophyll in the billions of microscopic plants that grow in the ocean. They wrapped these layers around a globe, set it against a black background, and simulated the hazy edge of the Earth’s atmosphere (the limb) that appears in astronaut photography of the Earth. The land surface layer is based on photo-like surface reflectance observations (reflected sunlight) measured by the Moderate Resolution Imaging Spectroradiometer (MODIS) on NASA’s Terra satellite in July 2004. The sea ice layer near the poles comes from Terra MODIS observations of daytime sea ice observed between August 28 and September 6, 2001. The ocean layer is a composite. In shallow water areas, the layer shows surface reflectances observed by Terra MODIS in July 2004. In the open ocean, the photo-like layer is overlaid with observations of the average ocean chlorophyll content for 2004. NASA’s Aqua MODIS collected the chlorophyll data. The cloud layer shows a single-day snapshot of clouds observed by Terra MODIS across the planet on July 29, 2001. City lights on Earth’s night side are visualized from data collected by the Defense Meteorological Satellite Program mission between 1994–1995. The topography layer is based on radar data collected by the Space Shuttle Endeavour during an 11-day mission in February of 2000. Topography over Antarctica comes from the Radarsat Antarctic Mapping Project, version 2. Most of the data layers in this visualization are available as monthly composites as part of NASA’s Blue Marble Next Generation image collection. The images in the collection appear in cylindrical projection (rectangular maps), and they are available at 500-meter resolution. The large images provided above are the full-size versions of these globes. In their hope that these images will inspire people to appreciate the beauty of our home planet and to learn about the Earth system, the developers of these images encourage readers to re-use and re-publish the images freely. NASA images by Reto Stöckli, based on data from NASA and NOAA. To learn the history of the Blue Marble go here: earthobservatory.nasa.gov/Features/BlueMarble/BlueMarble_... To learn more about the Blue Marble go here: earthobservatory.nasa.gov/IOTD/view.php?id=8108 NASA Goddard Space Flight Center is home to the nation's largest organization of combined scientists, engineers and technologists that build spacecraft, instruments and new technology to study the Earth, the sun, our solar system, and the universe. Follow us on Twitter Join us on Facebook

A Passive Method for Detecting Vegetation Stress from Orbit: Chlorophyll Fluorescence Spectra from Fraunhofer Lines

NASA Technical Reports Server (NTRS)

Theisen, Arnold F.

2000-01-01

Solar-stimulated chlorophyll fluorescence measured with the Fraunhofer line depth method has correlated well with vegetation stress in previous studies. However, the instruments used in those studies were limited to a single solar absorption line (e.g. 656.3 nm), obviating the red/far-red ratio (R/FR) method. Optics and detector technology have reached the level whereby multiple, very narrow Fraunhofer lines are resolvable. Thirteen such lines span the visible spectrum in the red to far-red region where chlorophyll fluorescence occurs. Fluorescence intensities at the 13 Fraunhofer line wavelengths were used to model emission spectra. The source data were collected for summer and fall bean crops (Phaseolus vulgaris L.) subjected to various levels of nitrogen fertilization. The intensities were adjusted to account for Fraunhofer line depth and atmospheric transmittance. Multiple R/FR fluorescence ratios, calculated from the modeled fluorescence spectra, correlated strongly with leaf chlorophyll concentration and well with applied nitrogen. The ratio yielding the best correlation with chlorophyll utilized red fluorescence at the 694.5 nm Fraunhofer line and farred fluorescence at the 755.6 nm Fraunhofer line. Twenty R/FR ratios, each evaluated for the maximum differential between low and high (optimal) nitrogen treatments, ranked higher in some cases and lower in others, possibly related to the time of year the crops were grown and the stage of growth of the crops. Ratios with 728.9 nm and 738.9 nm in the denominator consistently ranked in the lowest and next lowest quartile, respectively. Ratios of the 656.3 nm Fraunhofer line and the 755.6 nm line consistently ranked highest for the summer crop. Ratios with 755.6 nm in the denominator ranked in the upper quartile for 10 out of 12 measurement dates. Differences in ratio ranking indicate that physiological conditions may be estimated using selected ratios of Fraunhofer lines within the context of R/FR analysis. A passive instrument designed to monitor R/FR chlorophyll fluorescence (i.e. vegetation stress) from orbit could be built today.

Seasonal and nonseasonal variability of satellite-derived chlorophyll and colored dissolved organic matter concentration in the California Current

NASA Astrophysics Data System (ADS)

Kahru, Mati; Mitchell, B. Greg

2001-02-01

Time series of surface chlorophyll a concentration (Chl) and colored dissolved organic matter (CDOM) derived from the Ocean Color and Temperature Sensor and Sea-Viewing Wide Field-of-View Sensor were evaluated for the California Current area using regional algorithms. Satellite data composited for 8-day periods provide the ability to describe large-scale changes in surface parameters. These changes are difficult to detect based on in situ observations alone that suffer from undersampling the large temporal and spatial variability, especially in Chl. We detected no significant bias in satellite Chl estimates compared with ship-based measurements. The variability in CDOM concentration was significantly smaller than that in Chl, both spatially and temporally. While being subject to large interannual and short-term variations, offshore waters (100-1000 km from the shore) have an annual cycle of Chl and CDOM with a maximum in winter-spring (December-March) and a minimum in late summer. For inshore waters the maximum is more likely in spring (April-May). We detect significant increase in both Chl and CDOM off central and southern California during the La Niña year of 1999. The trend of increasing Chl and CDOM from October 1996 to June 2000 is statistically significant in many areas.

The inducement of planetary boundary layer mass convergence associated with varying vorticity beneath tropospheric wind maximum

NASA Technical Reports Server (NTRS)

Johnson, D. R.

1984-01-01

The effects of the vorticity distribution are applied to study planetary boundary layer mass convergence beneath free tropospheric wind maximum. For given forcing by viscous and pressure gradient forces beneath a wind maximum, boundary layer cross stream mass transport is increased by anticyclonic vorticity on the right flank and decreased by cyclonic vorticity on the left flank. Such frictionally forced mass transport induces boundary layer mass convergence beneath the relative wind maximum. This result is related to the empirical rule that the most intense convection and severe weather frequently develop beneath the 500 mb zero relative vorticity isopleth.

Bacterial assemblages of the eastern Atlantic Ocean reveal both vertical and latitudinal biogeographic signatures

NASA Astrophysics Data System (ADS)

Friedline, C. J.; Franklin, R. B.; McCallister, S. L.; Rivera, M. C.

2012-06-01

Microbial communities are recognized as major drivers of the biogeochemical processes in the oceans. However, the genetic diversity and composition of those communities is poorly understood. The aim of this study is to investigate the composition of bacterial assemblages in three different water layer habitats: surface (2-20 m), deep chlorophyll maximum (DCM; 28-90 m), and deep (100-4600 m) at nine stations along the eastern Atlantic Ocean from 42.8° N to 23.7° S. The sampling of three discrete, predefined habitat types from different depths, Longhurstian provinces, and geographical locations allowed us to investigate whether marine bacterial assemblages show spatial variation and to determine if the observed spatial variation is influenced by current environmental conditions, historical/geographical contingencies, or both. The PCR amplicons of the V6 region of the 16S rRNA from 16 microbial assemblages were pyrosequenced, generating a total of 352 029 sequences; after quality filtering and processing, 257 260 sequences were clustered into 2871 normalized operational taxonomic units (OTU) using a definition of 97% sequence identity. Community ecology statistical analyses demonstrate that the eastern Atlantic Ocean bacterial assemblages are vertically stratified and associated with water layers characterized by unique environmental signals (e.g., temperature, salinity, and nutrients). Genetic compositions of bacterial assemblages from the same water layer are more similar to each other than to assemblages from different water layers. The observed clustering of samples by water layer allows us to conclude that contemporary environments are influencing the observed biogeographic patterns. Moreover, the implementation of a novel Bayesian inference approach that allows a more efficient and explicit use of all the OTU abundance data shows a distance effect suggesting the influence of historical contingencies on the composition of bacterial assemblages. Surface bacterial communities displayed a general congruency with the ecological provinces as defined by Longhurst with modest exceptions usually associated with unique hydrographic and biogeochemical features. Collectively, our findings suggest that vertical (habitat) and latitudinal (distance) biogeographic signatures are present and that both environmental parameters and ecological provinces drive the composition of bacterial assemblages in the eastern Atlantic Ocean.

Photosynthesis in chlorolichens: the influence of the habitat light regime.

PubMed

Piccotto, Massimo; Tretiach, Mauro

2010-11-01

The hypothesis that CO(2) gas exchange and chlorophyll a fluorescence (ChlaF) of lichens vary according to the light regimes of their original habitat, as observed in vascular plants, was tested by analysing the photosynthetic performance of 12 populations of seven dorsoventral, foliose lichens collected from open, south-exposed rocks to densely shaded forests. Light response curves were induced at optimum thallus water content and ChlaF emission curves at the species-specific photon flux at which the quantum yield of CO(2) assimilation is the highest and is saturating the photosynthetic process. Photosynthetic pigments were quantified in crude extracts. The results confirm that the maximum rate of gross photosynthesis is correlated with the chlorophyll content of lichens, which is influenced by light as well as by nitrogen availability. Like leaves, shade tolerant lichens emit more ChlaF than sun-loving ones, whereas the photosynthetic quantum conversion is higher in the latter.

N2 fixation as a dominant new N source in the western tropical South Pacific Ocean (OUTPACE cruise)

NASA Astrophysics Data System (ADS)

Caffin, Mathieu; Moutin, Thierry; Foster, Rachel Ann; Bouruet-Aubertot, Pascale; Michelangelo Doglioli, Andrea; Berthelot, Hugo; Guieu, Cécile; Grosso, Olivier; Helias-Nunige, Sandra; Leblond, Nathalie; Gimenez, Audrey; Petrenko, Anne Alexandra; de Verneil, Alain; Bonnet, Sophie

2018-05-01

We performed nitrogen (N) budgets in the photic layer of three contrasting stations representing different trophic conditions in the western tropical South Pacific (WTSP) Ocean during austral summer conditions (February-March 2015). Using a Lagrangian strategy, we sampled the same water mass for the entire duration of each long-duration (5 days) station, allowing us to consider only vertical exchanges for the budgets. We quantified all major vertical N fluxes both entering (N2 fixation, nitrate turbulent diffusion, atmospheric deposition) and leaving the photic layer (particulate N export). The three stations were characterized by a strong nitracline and contrasted deep chlorophyll maximum depths, which were lower in the oligotrophic Melanesian archipelago (MA, stations LD A and LD B) than in the ultra-oligotrophic waters of the South Pacific Gyre (SPG, station LD C). N2 fixation rates were extremely high at both LD A (593 ± 51 µmol N m-2 d-1) and LD B (706 ± 302 µmol N m-2 d-1), and the diazotroph community was dominated by Trichodesmium. N2 fixation rates were lower (59 ± 16 µmol N m-2 d-1) at LD C, and the diazotroph community was dominated by unicellular N2-fixing cyanobacteria (UCYN). At all stations, N2 fixation was the major source of new N (> 90 %) before atmospheric deposition and upward nitrate fluxes induced by turbulence. N2 fixation contributed circa 13-18 % of primary production in the MA region and 3 % in the SPG water and sustained nearly all new primary production at all stations. The e ratio (e ratio = particulate carbon export / primary production) was maximum at LD A (9.7 %) and was higher than the e ratio in most studied oligotrophic regions (< 5 %), indicating a high efficiency of the WTSP to export carbon relative to primary production. The direct export of diazotrophs assessed by qPCR of the nifH gene in sediment traps represented up to 30.6 % of the PC export at LD A, while their contribution was 5 and < 0.1 % at LD B and LD C, respectively. At the three studied stations, the sum of all N input to the photic layer exceeded the N output through organic matter export. This disequilibrium leading to N accumulation in the upper layer appears as a characteristic of the WTSP during the summer season.

Biological response to coastal upwelling and dust deposition in the area off Northwest Africa

NASA Astrophysics Data System (ADS)

Ohde, T.; Siegel, H.

2010-05-01

Nutrient supply in the area off Northwest Africa is mainly regulated by two processes, coastal upwelling and deposition of Saharan dust. In the present study, both processes were analyzed and evaluated by different methods, including cross-correlation, multiple correlation, and event statistics, using remotely sensed proxies of the period from 2000 to 2008 to investigate their influence on the marine environment. The remotely sensed chlorophyll- a concentration was used as a proxy for the phytoplankton biomass stimulated by nutrient supply into the euphotic zone from deeper water layers and from the atmosphere. Satellite-derived alongshore wind stress and sea-surface temperature were applied as proxies for the strength and reflection of coastal upwelling processes. The westward wind and the dust component of the aerosol optical depth describe the transport direction of atmospheric dust and the atmospheric dust column load. Alongshore wind stress and induced upwelling processes were most significantly responsible for the surface chlorophyll- a variability, accounting for about 24% of the total variance, mainly in the winter and spring due to the strong north-easterly trade winds. The remotely sensed proxies allowed determination of time lags between biological response and its forcing processes. A delay of up to 16 days in the surface chlorophyll- a concentration due to the alongshore wind stress was determined in the northern winter and spring. Although input of atmospheric iron by dust storms can stimulate new phytoplankton production in the study area, only 5% of the surface chlorophyll- a variability could be ascribed to the dust component in the aerosol optical depth. All strong desert storms were identified by an event statistics in the time period from 2000 to 2008. The 57 strong storms were studied in relation to their biological response. Six events were clearly detected in which an increase of chlorophyll- a was caused by Saharan dust input and not by coastal upwelling processes. Time lags of <8 days, 8 days, and 16 days were determined. An increase in surface chlorophyll- a concentration of up to 2.4 mg m -3 after dust storms in which the dust component of the aerosol optical depth was up to 0.9 was observed.

Visual Analysis for Detection and Quantification of Pseudomonas cichorii Disease Severity in Tomato Plants.

PubMed

Rajendran, Dhinesh Kumar; Park, Eunsoo; Nagendran, Rajalingam; Hung, Nguyen Bao; Cho, Byoung-Kwan; Kim, Kyung-Hwan; Lee, Yong Hoon

2016-08-01

Pathogen infection in plants induces complex responses ranging from gene expression to metabolic processes in infected plants. In spite of many studies on biotic stress-related changes in host plants, little is known about the metabolic and phenotypic responses of the host plants to Pseudomonas cichorii infection based on image-based analysis. To investigate alterations in tomato plants according to disease severity, we inoculated plants with different cell densities of P. cichorii using dipping and syringe infiltration methods. High-dose inocula (≥ 10(6) cfu/ml) induced evident necrotic lesions within one day that corresponded to bacterial growth in the infected tissues. Among the chlorophyll fluorescence parameters analyzed, changes in quantum yield of PSII (ΦPSII) and non-photochemical quenching (NPQ) preceded the appearance of visible symptoms, but maximum quantum efficiency of PSII (Fv/Fm) was altered well after symptom development. Visible/near infrared and chlorophyll fluorescence hyperspectral images detected changes before symptom appearance at low-density inoculation. The results of this study indicate that the P. cichorii infection severity can be detected by chlorophyll fluorescence assay and hyperspectral images prior to the onset of visible symptoms, indicating the feasibility of early detection of diseases. However, to detect disease development by hyperspectral imaging, more detailed protocols and analyses are necessary. Taken together, change in chlorophyll fluorescence is a good parameter for early detection of P. cichorii infection in tomato plants. In addition, image-based visualization of infection severity before visual damage appearance will contribute to effective management of plant diseases.

The C21-formyl group in chlorophyll f originates from molecular oxygen.

PubMed

Garg, Harsh; Loughlin, Patrick C; Willows, Robert D; Chen, Min

2017-11-24

Chlorophylls (Chls) are the most important cofactors for capturing solar energy to drive photosynthetic reactions. Five spectral types of Chls have been identified to date, with Chl f having the most red-shifted absorption maximum because of a C2 1 -formyl group substitution of Chl f However, the biochemical provenance of this formyl group is unknown. Here, we used a stable isotope labeling technique ( 18 O and 2 H) to determine the origin of the C2 1 -formyl group of Chl f and to verify whether Chl f is synthesized from Chl a in the cyanobacterial species Halomicronema hongdechloris. In the presence of either H 2 18 O or 18 O 2 , the origin of oxygen atoms in the newly synthesized chlorophylls was investigated. The pigments were isolated with HPLC, followed by MS analysis. We found that the oxygen atom of the C2 1 -formyl group originates from molecular oxygen and not from H 2 O. Moreover, we examined the kinetics of the labeling of Chl a and Chl f from H. hongdechloris grown in 50% D 2 O-seawater medium under different light conditions. When cells were shifted from white light D 2 O-seawater medium to far-red light H 2 O-seawater medium, the observed deuteration in Chl f indicated that Chl(ide) a is the precursor of Chl f Taken together, our results advance our understanding of the biosynthesis pathway of the chlorophylls and the formation of the formyl group in Chl f . © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Effect of ionic liquids with different cations and anions on photosystem and cell structure of Scenedesmus obliquus.

PubMed

Xia, Yilu; Liu, Dingdong; Dong, Ying; Chen, Jiazheng; Liu, Huijun

2018-03-01

The rapid increase in the production and practical application of ionic liquids (ILs) could pose potential threats to aquatic systems. In this study, we investigated the effects of four ILs with different cations and anions, including 1-hexyl-3-methylimidazolium nitrate ([HMIM]NO 3 ), 1-hexyl-3-methylimidazolium chloride ([HMIM]Cl), N-hexyl-3-metylpyridinium chloride ([HMPy]Cl), and N-hexyl-3-metylpyridinium bromide ([HMPy]Br), on photosystem and cellular structure of Scenedesmus obliquus. The results indicated that ILs are phytotoxic to S. obliquus. The contents of chlorophyll a, chlorophyll b and total chlorophyll decreased with increasing ILs concentrations. The chlorophyll fluorescence parameters of photosynthetic system II (PSII), including minimal fluorescence yield (F 0 ), potential efficiency of PSII (F v /F o ), maximum quantum efficiency of PSII photochemistry (F v /F m ), yield of photochemical quantum [Y(II)], and non-photochemical quenching coefficient without measuring F 0 ' (NPQ), were all affected. This indicates that ILs could damage PSII, inhibit the primary reaction of photosynthesis, interdict the process of electron-transfer and lead to loss of heat-dissipating ability. ILs also increased cell membrane permeability of S. obliquus, influenced the cellular ultrastructure, changed the morphology of algae cells and destroyed the cell wall, cell membrane and organelles. The results indicated that imidazolium ILs had greater effect than pyridinium ILs, NO 3 - -IL and Br - -IL had greater effect than Cl - -IL. To minimize threats to the environment, the structure of ILs should be taken into consideration. Copyright © 2017 Elsevier Ltd. All rights reserved.

Identification of the 7-Hydroxymethyl Chlorophyll a Reductase of the Chlorophyll Cycle in Arabidopsis[W

PubMed Central

Meguro, Miki; Ito, Hisashi; Takabayashi, Atsushi; Tanaka, Ryouichi; Tanaka, Ayumi

2011-01-01

The interconversion of chlorophyll a and chlorophyll b, referred to as the chlorophyll cycle, plays a crucial role in the processes of greening, acclimation to light intensity, and senescence. The chlorophyll cycle consists of three reactions: the conversions of chlorophyll a to chlorophyll b by chlorophyllide a oxygenase, chlorophyll b to 7-hydroxymethyl chlorophyll a by chlorophyll b reductase, and 7-hydroxymethyl chlorophyll a to chlorophyll a by 7-hydroxymethyl chlorophyll a reductase. We identified 7-hydroxymethyl chlorophyll a reductase, which is the last remaining unidentified enzyme of the chlorophyll cycle, from Arabidopsis thaliana by genetic and biochemical methods. Recombinant 7-hydroxymethyl chlorophyll a reductase converted 7-hydroxymethyl chlorophyll a to chlorophyll a using ferredoxin. Both sequence and biochemical analyses showed that 7-hydroxymethyl chlorophyll a reductase contains flavin adenine dinucleotide and an iron-sulfur center. In addition, a phylogenetic analysis elucidated the evolution of 7-hydroxymethyl chlorophyll a reductase from divinyl chlorophyllide vinyl reductase. A mutant lacking 7-hydroxymethyl chlorophyll a reductase was found to accumulate 7-hydroxymethyl chlorophyll a and pheophorbide a. Furthermore, this accumulation of pheophorbide a in the mutant was rescued by the inactivation of the chlorophyll b reductase gene. The downregulation of pheophorbide a oxygenase activity is discussed in relation to 7-hydroxymethyl chlorophyll a accumulation. PMID:21934147

Effects of Dihydroartemisinin and Artemether on the Growth, Chlorophyll Fluorescence, and Extracellular Alkaline Phosphatase Activity of the Cyanobacterium Microcystis aeruginosa.

PubMed

Wang, Shoubing; Xu, Ziran

2016-01-01

Increased eutrophication in the recent years has resulted in considerable research focus on identification of methods for preventing cyanobacterial blooms that are rapid and efficient. The objectives of this study were to investigate the effects of dihydroartemisinin and artemether on the growth of Microcystis aeruginosa and to elucidate its mode of action. Variations in cell density, chlorophyll a, soluble protein, malondialdehyde, extracellular alkaline phosphatase activity (APA), and chlorophyll fluorescence parameters (Fv/Fm, ΦPSII, ETR, rapid light curves, fast chlorophyll fluorescence curves on fluorescence intensity, and relative variable fluorescence) were evaluated by lab-cultured experiments. Our results demonstrated that both dihydroartemisinin and artemether inhibited the growth of M.aeruginosa by impairing the photosynthetic center in photosystem II and reducing extracellular APA, with a higher sensitivity exhibited toward artemether. The inhibitory effects of dihydroartemisinin on M.aeruginosa increased with concentration, and the maximum growth inhibitory rate was 42.17% at 24 mg·L-1 after 120h exposure, whereas it was 55.72% at 6 mg·L-1 artemetherafter 120h exposure. Moreover, the chlorophyll fluorescence was significantly inhibited (p<0.05) after 120h exposure to 12 and 24 mg·L-1 dihydroartemisinin. Furthermore, after 120h exposure to 6 mg·L-1 artemether, Fv/Fm, ΦPSII, ETR and rETRmax showed a significant decrease (p<0.01) from initial values of 0.490, 0.516, 17.333, and 104.800, respectively, to 0. One-way analysis of variance showed that 6 mg·L-1 artemether and 24 mg·L-1 dihydroartemisinin had significant inhibitory effects on extracellular APA (p<0.01). The results of this study would be useful to further studies to validate the feasibility of dihydroartemisinin and artemether treatment to inhibit overall cyanobacterial growth in water bodies, before this can be put into practice.

Drivers of the autumn phytoplankton development in the open Black Sea

NASA Astrophysics Data System (ADS)

Mikaelyan, Alexander S.; Shapiro, Georgy I.; Chasovnikov, Valeriy K.; Wobus, Fred; Zanacchi, Marcus

2017-10-01

The dynamics of the autumn development of phytoplankton in the Black Sea were investigated using satellite-derived chlorophyll-a concentration (Chl), which was estimated for two regions in the deep sea over a 20-year period. We analysed 8-day composite Chl images along with changes in: (i) nutrient concentration obtained from in-situ measurements, (ii) sea surface temperature (SST), (iii) photosynthetically available radiation (PAR) obtained from satellite imagery, (iv) wind speed from the re-analysis of meteodata and (v) the depth of the upper mixed layer (UML) calculated from a 3D numerical model of the Black Sea. The peak in Chl was identified most frequently in the first half of November. A positive correlation between the duration of strong wind events and phytoplankton development was revealed, which was associated with the deepening of the UML, and replenishment of the photic zone with nutrients. The impact on phytoplankton was significant when the cumulative duration of strong wind (> 8 m s- 1) exceeded 60 h over the preceding 8 days. In such cases, the frequency of the Chl peaks increased up to 30-50% with an average of 20%. Strong wind was shown to determine the timing of the autumn bloom, but not its strength. From a positive relationship between the maximum Chl and nitrate concentration we found instead that the intensity of the autumn bloom was mainly defined by nitrate replenishment in the photic zone. On average, the timing of the seasonal maximum of Chl in the first half of November coincided with the deepening of the UML to the bottom of the seasonal thermocline (ca 25 m). Elution of nitrate from deeper layers, where its concentration is substantially higher, mitigated the nutrient limitation of phytoplankton growth. At the same time, a sharp decrease in PAR after mid-November resulted in the limitation of light for phytoplankton growth. Inter-annual variations of Chl in spring and autumn were shown not to be correlated. For example, the basin-wide autumn blooms were observed in some years when the spring blooms were absent. As the bloom cannot be based on regenerated nitrate, the amount of 'new' nitrate in the photic zone should have a positive trend in autumn. However, the sources and mechanisms of the basin-wide increase of nitrate concentration in the upper layer in autumn are not clear.

High performance of chlorophyll-a prediction algorithms based on simulated OLCI Sentinel-3A bands in cyanobacteria-dominated inland waters

NASA Astrophysics Data System (ADS)

Watanabe, Fernanda Sayuri Yoshino; Alcântara, Enner; Stech, José Luiz

2018-07-01

In this research, we have investigated whether the chlorophyll-a (chl a) retrieval algorithms based on OLCI Sentinel-3A bands are suitable for cyanobacteria-dominated waters. Phytoplankton assemblages model optical properties of the water, influencing the performance of bio-optical algorithms. Understanding these processes is important to improve the prediction of photoactive pigments in order to use them as a proxy for trophic state and harmful algal bloom. So that, both empirical and semi-analytical approaches designed for different inland waters were tested. In addition, empirical models were tuned based on dataset collected in situ. The study was conducted in the Funil hydroelectric reservoir, where chl a ranged from 2.33 to 208.68 mg m-3 in May 2012 (austral fall) and 4.37 to 306.03 mg m-3 in October 2012 (austral spring). OLCI Sentinel-3A bands were tested in existing algorithms developed for other sensors and new band combinations were compared to analyze the errors produced. Normalized Difference Chlorophyll Index (NDCI) exhibited the best performance, with a Normalized Root Mean Square Error (NRMSE) of 9.30%. Result showed that wavelength at 665 nm is adequate to estimate chl a, although the maximum pigment absorption band is shifted due to phycocyanin fluorescence at approximately 650 nm.

Chlorophyll Fluorescence as a Possible Tool for Salinity Tolerance Screening in Barley (Hordeum vulgare L.).

PubMed Central

Belkhodja, R.; Morales, F.; Abadia, A.; Gomez-Aparisi, J.; Abadia, J.

1994-01-01

The application of chlorophyll fluorescence measurements to screening barley (Hordeum vulgare L.) genotypes for salinity tolerance has been investigated. Excised barley leaves were cut under water and incubated with the cut end immersed in water or in a 100-mM NaCl solution, either in the dark or in high light. Changes in rapid fluorescence kinetics occurred in excised barley leaves exposed to the saline solution only when the incubation was carried out in the presence of high light. Fluorescence changes consisted of decreases in the variable to maximum fluorescence ratio and in increases in the relative proportion of variable fluorescence leading to point I in the Kautsky fluorescence induction curve. These relative increases in fluorescence at point I appeared to arise from a delayed plastoquinone reoxidation in the dark, since they disappeared after short, far-red illumination, which is known to excite photosystem I preferentially. We show that a significant correlation existed between some fluorescence parameters, measured after a combined salt and high-light treatment, and other independent measurements of salinity tolerance. These results suggest that chlorophyll fluorescence, and especially the relative fluorescence at point I in the Kautsky fluorescence induction curve, could be used for the screening of barley genotypes for salinity tolerance. PMID:12232117

A model for the origin of photosynthesis--III. The ultraviolet photochemistry of uroporphyrinogen

NASA Technical Reports Server (NTRS)

Mercer-Smith, J. A.; Raudino, A.; Mauzerall, D. C.

1985-01-01

The photochemical ramifications of the high ultraviolet flux on the primordial earth prior to the formation of the ozone layer have been considered in a study of the ultraviolet photochemistry of uroporphyrinogen (urohexahydroporphyrin), a colorless compound which absorbs strongly at wavelengths less than 220 nanometers. Urohexahydroporphyrin was investigated since it is the first macrocycle formed on the biosynthetic pathway of chlorophyll and can be used to test the hypothesis that the biosynthetic pathway to chlorophyll recapitulates the evolutionary history of photosynthesis. When urohexahydroporphyrin is illuminated in aqueous anaerobic solution, hydrogen gas is produced. More hydrogen gas is produced in the presence of a colloidal platinum catalyst. The products of the photooxidation of urohexahydroporphyrin are urotetrahydroporphyrin (uroporphomethene) and uroporphyrin. This research shows how the oxidation of uroporphyrinogen to uroporphyrin, the first biogenetic porphyrin, could have occurred anaerobically and abiotically on the primordial earth.

Lipophilic pigments from the benthos of a perennially ice-covered Antarctic lake

NASA Technical Reports Server (NTRS)

Palmisano, A. C.; Wharton, R. A. Jr; Cronin, S. E.; Des Marais, D. J.; Wharton RA, J. r. (Principal Investigator)

1989-01-01

The benthos of a perennially ice-covered Antarctic lake, Lake Hoare, contained three distinct 'signatures' of lipophilic pigments. Cyanobacterial mats found in the moat at the periphery of the lake were dominated by the carotenoid myxoxanthophyll; carotenoids: chlorophyll a ratios in this high light environment ranged from 3 to 6.8. Chlorophyll c and fucoxanthin, pigments typical of golden-brown algae, were found at 10 to 20 m depths where the benthos is aerobic. Anaerobic benthic sediments at 20 to 30 m depths were characterized by a third pigment signature dominated by a carotenoid, tentatively identified as alloxanthin from planktonic cryptomonads, and by phaeophytin b from senescent green algae. Pigments were not found associated with alternating organic and sediment layers. As microzooplankton grazers are absent from this closed system and transformation rates are reduced at low temperatures, the benthos beneath the lake ice appears to contain a record of past phytoplankton blooms undergoing decay.

Fluorescence characteristics in the deep waters of South Gulf of México.

PubMed

Schifter, I; Sánchez-Reyna, G; González-Macías, C; Salazar-Coria, L; González-Lozano, C

2017-10-15

Vertical profiles of deep-water fluorescence determined by the chlorophyll sensor, polycyclic aromatic hydrocarbons, biomarkers, and other miscellaneous parameters measured in the southern Gulf of Mexico are reported. In the course of the survey, unexpected deep fluorescences were recorded (>1100m depth) in half of the 40 stations studied, a novel finding in this area of the Gulf. Currently, the deep-water fluorescence phenomenon is not completely understood, however we observe linear correlation between the fluorescence intensity and chlorophyll-α concentrations and coincidence of higher number of hydrocarbonoclastic bacteria in samples collected precisely in the deep-water fluorescence. This information is particularly interesting in relation to the Deepwater Horizon oil spill in 2010, in view that the aftermaths of the spill can be observed till today as oil plumes trapped in deep water layers that may disturb the natural water ecosystem. Copyright © 2017 Elsevier Ltd. All rights reserved.

Notes on a Mesodinium rubrum red tide in San Francisco Bay (California, USA)

USGS Publications Warehouse

Cloern, James E.; Cole, Brian E.; Hager, Stephen W.

1994-01-01

Discrete red patches of water were observed in South San Francisco Bay (USA) on 30 April 1993, and examination of live samples showed that this red tide was caused by surface accumulations of the pigmented ciliate Mesodinium rubrum . Vertical profiles showed strong salinity and temperature stratification in the upper 5 m, peak chlorophyll fluorescence in the upper meter, and differences in the small-scale density structure and fluorescence distribution among red patches. Events preceding this Mesodinium red tide included: (i) heavy precipitation and run-off, allowing for strong salinity stratification; (ii) a spring diatom bloom where the chlorophyll a concentration reached 50 mg m −3 ; (ii) depletions of dissolved inorganic N and Si in the photic zone; and (iv) several days of rapid warming and stabilization of the upper surface layer. These conditions may be general prerequisites for M.rubrum blooms in temperate estuaries.

Photosynthetic behavior of woody species under high ozone exposure probed with the JIP-test: a review.

PubMed

Bussotti, Filippo; Strasser, Reto J; Schaub, Marcus

2007-06-01

Visible ozone symptoms on leaves are expressions of physiological mechanisms to cope with oxidative stresses. Often, the symptoms consist of stippling, which corresponds to localized cell death (hypersensitive response, HR), separated from healthy cells by a layer of callose. The HR strategy tends to protect the healthy cells and in most cases the efficiency of chlorophyll to trap energy is not affected. In other cases, the efficiency of leaves to produce biomass declines and the plant loses its photosynthetic apparatus replacing it with a new, more efficient one. Another strategy consists of the production of pigments (anthocyanins), and leaves become reddish. In these cases, the most significant physiological manifestation consists of the enhanced dissipation of energy. These different behavior patterns are reflected in the initial events of photosynthetic activity, and can be monitored with techniques based on the direct fluorescence of chlorophyll a in photosystem II, applying the JIP-test.

Distribution of planktonic cnidarians in response to South Atlantic Central Water intrusion in the South Brazilian Bight

NASA Astrophysics Data System (ADS)

Nogueira Júnior, Miodeli; Brandini, Frederico P.; Codina, Juan C. U.

2014-10-01

Five oceanographic cruises were made between November 2005 and June 2006, sampling a cross-shelf transect off the South Brazilian Bight (SBB; 26°46‧S) to follow the seasonal development of the South Atlantic Central Water (SACW) intrusion over the shelf and its influence on the assemblage of planktonic cnidarians. An onshore wind-driven bottom intrusion of the SACW was clearly perceptible, reaching the coast in January. From March onward, the SACW influence was gradually displaced seaward due to wind and tidal mixing. By late June the SACW influence was offshore and the inshore was dominated by low-salinity waters (<34.5). The abundance, distribution, and general taxonomic composition of both medusae and siphonophores were strongly influenced by the onshore intrusion of the SACW. An inshore-offshore gradient was clear. The Canonical Correspondence Analysis suggested that coastal species - dominated by Liriope tetraphylla, actinula larvae and Muggiaea kochi - were mostly related to food availability and a vertically mixed environment inshore, and their abundance and extent were reduced during intrusion periods. In contrast, species with offshore affinities tended to increase their abundance and distribution during intrusion periods, and were mostly related to the presence of thermal stratification and a deep chlorophyll maximum layer. Most of these offshore species, such as Aglaura hemistoma, Rhopalonema velatum and many calycophorans, are associated with the warm upper layer. However, high concentrations of large (>20 mm in diameter) Solmaris corona were observed exclusively in cold waters, suggesting this medusa is a SACW indicator.

Concentration and biochemical gradients of seston in Lake Ontario

USGS Publications Warehouse

Kelly, Patrick T.; Weidel, Brian C.; Paufve, Matthew R.; O'Malley, Brian P.; Watkins, James M.; Rudstam, Lars G.; Jones, Stuart E.

2017-01-01

Spatial variability in resource quantity and quality may have important implications for the distribution and productivity of primary consumers. In Lake Ontario, ecosystem characteristics suggest the potential for significant spatial heterogeneity in seston quantity and quality, particularly due to the potential for nearshore-offshore gradients in allochthonous nutrient supply, and the formation of a deep chlorophyll layer (DCL) in July. We assessed total and zooplankton food particle size-fractionated chlorophyll a concentrations, as well as carbon-to-phosphorus stoichiometry and essential fatty acid composition of seston across a distance-from-shore and depth transect. We observed time, sampling depth, and distance from shore to be the best predictors of chlorophyll a concentration. Resource quality was much more homogenous in space, but there were strong patterns through time, as both stoichiometric and fatty acid qualities in general were greatest in May, and lowest in July/August. We did observe a peak in essential fatty acid concentration near the DCL in during time of formation, possibly due to differences in phytoplankton community composition between the DCL and epilimnion. These results suggest the potential for a spatially and temporally dynamic resource base for consumers in Lake Ontario, which may be important in developing a broader understanding of variable consumer productivity.

Autonomous profiling float observations of the high biomass plume downstream of the Kerguelen plateau in the Southern Ocean

NASA Astrophysics Data System (ADS)

Grenier, M.; Della Penna, A.; Trull, T. W.

2014-12-01

Natural iron fertilisation from Southern Ocean islands results in high primary production and phytoplankton biomass accumulations readily visible in satellite ocean colour observations. These images reveal great spatial complexity with highly varying concentrations of chlorophyll, presumably reflecting both variations in iron supply and conditions favouring phytoplankton accumulation. To examine the second aspect, in particular the influences of variations in temperature and stratification, we deployed four autonomous profiling floats in the Antarctic Circumpolar Current near the Kerguelen plateau in the Indian sector of the Southern Ocean. Each "bio-profiler" measured more than 250 profiles of temperature (T), salinity (S), dissolved oxygen, chlorophyll fluorescence (Chl a), and particle backscatter in the top 300 m of the water column, sampling up to 5 profiles per day along meandering trajectories extending up to 1000 km. Comparison of surface Chl a estimates (top 50 m depth; analogous to values from satellite images) with total water column inventories revealed largely linear relationships, suggesting that dilution of chlorophyll by mixed layer depth variations plays only a minor role in the spatial distributions observed by satellite, and correspondingly that these images provide credible information on total and not just surface biomass accumulations. Regions of very high Chl a accumulation (1.5-10 μg L-1) were associated predominantly with a narrow T-S class of surface waters, which appears to derive from the northern Kerguelen plateau. In contrast, waters with only moderate Chl a enrichments (0.5-1.5 μg L-1) displayed no clear correlation with water properties, including no dependence on mixed layer depth, suggesting a diversity of sources of iron and/or its efficient dispersion across filaments of the plume. The lack of dependence on mixed layer depth also indicates a limited influence on production by light limitation. One float became trapped in a cyclonic eddy, allowing temporal evaluation of the water column in early autumn. During this period, decreasing surface Chl a inventories corresponded with decreases in oxygen inventories on sub-mixed layer density surfaces, consistent with significant export of organic matter and its respiration and storage as dissolved inorganic carbon in the ocean interior. These results are encouraging for the expanded use of autonomous observing platforms to study biogeochemical, carbon cycle, and ecological problems, although the complex blend of Lagrangian and Eulerian sampling achieved by the floats suggests that arrays rather than single floats will often be required.

Responses of Pseudokirchneriella subcapitata and algal assembly to photocatalytic titanium dioxide nanoparticles

NASA Astrophysics Data System (ADS)

Metzler, David M.

Development and use of nanomaterials has increased significantly over the past decade. This trend is expected to continue for the foreseeable future, which have led some to call this new industrial revolution. One aspect of these materials that make them special is their unique properties that are different from the bulk material. These unique properties have not been investigated to determine to what extent they will impact the environment. This work was undertaken to understand how nanoparticles could impact algae. For the determination of nanoparticle toxicity, dose-response experiments were run for similar sized Al2O3, TiO2, and SiO2. Additional, a wide range of nanoparticle sizes (d1) were tested at 100 and 1000 mg/L for Al2O3, TiO 2, and SiO2. Results of different nanoparticles and similar d1 dose-response data show increased toxicity with increased surface charge of the nanoparticle. Various d1 of Al2O 3 effect the population and chlorophyll a but not lipid peroxidation. Various d1 of SiO2 and TiO2 effect the population, chlorophyll a, and lipid peroxidation. Of all TiO2 d1 tested 42 nm had the greatest effect on population, chlorophyll a, and lipid peroxidation. The effect of light intensity, algal age, and body burden was examined. The body burden was adjusted by varying the initial algal cell population while keeping the nanoparticle concentration constant. Decreased body burden decreased the effect on population. The chlorophyll a and lipid peroxidation varied with the initial decreased with decreased body burden. This trend was reversed at low body burden, the chlorophyll a and lipid peroxidation increased 3 -- 4 times greater than control values. The algal cell age was controlled by the hydraulic retention time of the pre-exposure continuously stirred tank reactors. As the age of the algae increased the effect of population increased. At algae age great then 10 days the effect on population reminded constant. Titanium dioxide effect on chlorophyll a varied with algal age and TiO 2 concentration. Finally, the effect of light intensity was examined for both visible and UV wavelengths. The greatest effect was for 1000 mg/L of TiO2 under varying light. Peak maximums occurred for chlorophyll a and lipid peroxidation. Peak minimums occurred for population. Varying UV light intensity resulted in decreased population for 100 and 1000 mg/L of TiO2. Additionally, chlorophyll a reached a maximum at 17 and 5 x the control values under 66% UV light for 100 and 1000 mg/L of TiO 2, respectively. The effect of copper and phenol to P. subcapitata was examined in the presence of TiO2. Copper in the presence of TiO 2 increased both chlorophyll a and lipid peroxidation greater than in the presence of TiO2 alone. Optimum conditions were observed for both endpoints. When algae were exposed to Cu and TiO2 the compounds acted independently of each other, having an additive effect on population. The TiO2 acted as a protective barrier against phenol toxicity at low phenol concentrations. At high phenol concentrations the toxicity of both phenol and TiO2 increased. Both compounds acted to disrupt the cell wall stability as seen with microscopy imaging. This was presumed to be through destruction of the Ca-pectinate within the cell wall, as indicated by increased soluble Ca correlated with phenol concentrations. The effect of TiO2 on cell barriers and natural algal assemblage was investigated. SEM images reveal that algae exposed to TiO2 have DNA external to the cell. Under hypotonic stress the loss of electrolytes was less controlled when the total number of nanoparticles was 1010 in the sample, at d1 less than 46 nm. At d1 greater than 46 nm no effect on electrolyte regulation was noted. Natural algal assemblages exposed to TiO2 varied there fatty acid (FA) content. This could be due to selective growth resistant reactive oxygen species (ROS) organisms or the percentages of certain FAs were decreased because of sensitivity to ROS. (Abstract shortened by UMI.)

Primary production in the northern Red Sea

NASA Astrophysics Data System (ADS)

Qurban, Mohammed Ali; Balala, Arvin C.; Kumar, Sanjeev; Bhavya, P. S.; Wafar, Mohideen

2014-04-01

Rates of uptake of carbon and nitrogen (ammonium, nitrate and urea) by phytoplankton, along with concentrations of nutrients and chlorophyll a, in the Saudi Arabian waters of the northern Red Sea (23 °N-28 °N) were measured in autumn, 2012. Concentrations of nitrate, nitrite and phosphate within the euphotic zone were in trace amounts while those of silicon were in excess of 0.5 μmol L- 1. Concentrations of chlorophyll (Chl a) were very low within the euphotic zone (0.01-0.6 μg L- 1 at discrete depths and 1.53-21.5 mg m- 2 as column-integrated values). A deep chlorophyll maximum and a nitrite maximum were present between 60 and 80 m at almost all of the stations occupied. Rates of carbon uptake at discrete depths ranged from 0.02 to 3 μg C L- 1 h- 1. Chl-normalized carbon uptake rates related with ambient light in a Michaelis-Menten kinetic pattern. About 80% of the carbon uptake was attributable to the < 20 μm fraction. Ammonium and urea were the nitrogen compounds taken up in preference by phytoplankton and accounted for close to 90% of the total N uptake. Considered together, these results indicate that the waters of the northern Red Sea are oligotrophic and that the primary production is strongly N-controlled. Analyses of the data and interpretation of the results led to the following speculations: (1) the perceived north-south gradient in Chl a (and possibly in primary production) in the Red Sea is maintained by circulation of Chl- and nutrient-rich waters through a series of gyres, (2) there is a greater role for heterotrophy and microbial loop in the trophic dynamics, and (3) in situ nitrification in the euphotic zone is an important source of N for phytoplankton and consequently export of carbon to deep sea could be lesser than that indicated by f-ratios.

Estimation of proximate composition, micronutrients and phytochemical compounds in traditional vegetables from Andaman and Nicobar Islands.

PubMed

Singh, Shrawan; Singh, D R; Salim, K M; Srivastava, Amit; Singh, L B; Srivastava, R C

2011-11-01

In present study, 10 preferred traditional vegetables from Andaman and Nicobar Islands, India, were analysed for nutritional profiles. Moisture content in their edible parts ranged from 83.43 to 94.78%. Maximum ash content was recorded in Portulaca oleracea, crude protein in Colocasia esculenta, crude fibre in Eryngium foetidum and fat in E. foetidum. Phosphorus was maximum in Ipomea aquatica, potassium in C. esculenta, zinc, calcium and manganese in Centella asiatica, copper in Sauropus androgynous, sodium and iron in P. oleracea, magnesium in Amaranthus viridi and cobalt in C. esculenta. Maximum polyphenol was recorded in Hibiscus sabdariffa, carotenoids in A. viridi, ascorbic acid in Saursops androgynus, anthocyanin in C. esculenta and chlorophyll in S. androgynus. Antioxidant activity was maximum in P. oleracea. Positive correlation was observed between polyphenol and tannin content and also between antioxidant activity and photochemicals. The developed nutritional profiles is being used in health and nutrition related schemes in Islands.

[Effects of NaCl stress on photosynthesis characteristics and fast chlorophyll fluorescence induction dynamics of Pistacia chinensis leaves].

PubMed

Li, Xu-Xin; Liu, Bing-Xiang; Guo, Zhi-Tao; Chang, Yue-Xia; He, Lei; Chen, Fang; Lu, Bing-She

2013-09-01

By using fast chlorophyll fluorescence induction dynamics analysis technique (JIP-test), this paper studied the photosynthesis characteristics and fast chlorophyll fluorescence induction dynamics of 1-year old Pistacia chinensis seedlings under the stress of NaCl at the concentrations 0% (CK), 0.15%, 0.3%, 0.45%, and 0.6%. With the increasing concentration of NaCl, the contents of Chl a, Chl b, and Chl (a+b) in the seedlings leaves decreased, the Chl a/b ratio decreased after an initial increase, and the carotenoid content increased. The net photosynthetic rate (P(n)) and stomatal conductance (g(s)) decreased gradually with increasing NaCl concentration. The decrease of P(n) was mainly attributed to the stomatal limitation when the NaCl concentration was lower than 0.3%, and to the non-stomatal limitation when the NaCl concentration was higher than 0.3%. The trapped energy flux per RC (TR0/CS0), electron transport flux per RC (ET0/CS0), density of RCs (RC/CS0), and yield or flux ratio (psi(0) or phi(E0)) decreased, but the absorption flux per CS (ABS/CS0) and the K phase (W(k)) and J phase (V) in the O-J-I-P chlorophyll fluorescence induction curves increased distinctly, indicating that NaCl stress damaged the leaf oxygen-evolving complex (OEC), donor sides, and PS II reaction centers. When the NaCl concentration reached 0.3%, the maximum photochemical efficiency (F(v)/F(m)) and performance index (PI(ABS)) decreased 17.7% and 36.6%, respectively, as compared with the control.

Monsoon-induced changes in the size-fractionated phytoplankton biomass and production rate in the estuarine and coastal waters of southwest coast of India.

PubMed

Madhu, N V; Jyothibabu, R; Balachandran, K K

2010-07-01

Changes in the autotrophic pico- (0.2-2 microm), nano- (2-20 microm), and microplankton (>20 microm) biomass (chlorophyll a) and primary production were measured in the estuarine and coastal waters off Cochin, southwest coast of India during the onset and establishment of a monsoon. During this period, the estuary was dominated by nutrient-rich freshwater, whereas the coastal waters were characterized with higher salinity values (>30 psu) and less nutrients. The average surface chlorophyll a concentrations and primary production rates were higher in the estuary (average 13.7 mg m(-3) and 432 mgC m(-3) day(-1)) as compared to the coastal waters (5.3 mg m(-3) and 224 mgC m(-3) day(-1)). The nanoplankton community formed the major fraction of chlorophyll a and primary production, both in the estuary (average 85 +/- SD 8.3% and 81.2 +/- SD 3.2%) and the coastal waters (average 73.2 +/- SD 17.2% and 81.9 +/- 15.7%). Nanoplankton had the maximum photosynthetic efficiency in the coastal waters (average 4.8 +/- SD 3.9 mgC mgChl a m(-3) h(-1)), whereas in the estuary, the microplankton had higher photosynthetic efficiency (average 7.4 +/- 7 mgC mgChl a m(-3) h(-1)). The heavy cloud cover and increased water column turbidity not only limit the growth of large-sized phytoplankton in the Cochin estuary and coastal waters but also support the proliferation of nanoplankton community during the monsoon season, even though large variation in nanoplankton chlorophyll a and production exists between these two areas.

Tying Biological Activity to Changes in Sea Spray Aerosol Chemical Composition via Single Particle Analyses

NASA Astrophysics Data System (ADS)

Sultana, C. M.; Lee, C.; Collins, D. B.; Axson, J. L.; Laskina, O.; Grandquist, J. R.; Grassian, V. H.; Prather, K. A.

2014-12-01

In remote marine environments, sea spray aerosols (SSA) often represent the greatest aerosol burden, thus having significant impacts on direct radiative interactions and cloud processes. Previous studies have shown that SSA is a complex mixture of inorganic salts and an array of dissolved and particulate organic components. Enrichment of SSA organic content is often correlated to seawater chlorophyll concentrations, a measure of oceanic biological activity. As the physical and chemical properties of aerosols control their radiative effects, recent studies conducted by the Center for Aerosol Impacts on Climate and the Environment have endeavored to further elucidate the ties between marine biological activity and primary SSA chemical composition using highly time resolved single particle analyses. A series of experiments performed in the recently developed Marine Aerosol Reference Tank evaluated the effect of changing marine microbial populations on SSA chemical composition, which was monitored via an aerosol time-of-flight mass spectrometer and a variety of offline spectroscopic and microscopic techniques. Each experiment was initiated using unfiltered and untreated seawater, thus maintaining a high level of biogeochemical complexity. This study is the first of its kind to capture daily changes in the primary SSA mixing state over the growth and death of a natural phytoplankton bloom. Increases in organic aerosol types (0.4-3 μm), internally and externally mixed with sea salt, could not be correlated to chlorophyll concentrations. Maximum production of these populations occurred two to four days after the in vivo chlorophyll fluorescence peaked in intensity. This work is in contrast to the current paradigm of correlating SSA organic content to seawater chlorophyll concentration.

Ecotoxicity of two organophosphate pesticides chlorpyrifos and dichlorvos on non-targeting cyanobacteria Microcystis wesenbergii.

PubMed

Sun, Kai-Feng; Xu, Xiang-Rong; Duan, Shun-Shan; Wang, You-Shao; Cheng, Hao; Zhang, Zai-Wang; Zhou, Guang-Jie; Hong, Yi-Guo

2015-10-01

Organophosphate pesticides (OPs), as a replacement for the organochlorine pesticides, are generally considered non-toxic to plants and algae. Chlorpyrifos and dichlorvos are two OPs used for pest control all over the world. In this study, the dose-response of cyanobacteria Microcystis wesenbergii on OPs exposure and the stimulating effect of OPs with and without phosphorus source were investigated. The results showed that high concentrations of chlorpyrifos and dichlorvos caused significant decrease of chlorophyll a content. The median inhibitory concentrations (EC50) of chlorpyrifos and dichlorvos at 96 h were 15.40 and 261.16 μmol L(-1), respectively. Growth of M. wesenbergii under low concentration of OPs (ranged from 1/10,000 to 1/20 EC50), was increased by 35.85 % (chlorpyrifos) and 41.83 % (dichlorvos) at 120 h, respectively. Correspondingly, the highest enhancement on the maximum quantum yield (F v/F m) was 4.20 % (24 h) and 9.70 % (48 h), respectively. Chlorophyll fluorescence kinetics, known as O-J-I-P transients, showed significant enhancements in the O-J, J-I, and I-P transients under low concentrations of dichlorvos at 144 h, while enhancements of chlorophyll fluorescence kinetics induced by low concentrations of chlorpyrifos were only observed in the J-I transient at 144 h. Significant decreases of chlorophyll content, F v/F m and O-J-I-P transients with OPs as sole phosphorus source were found when they were compared with inorganic phosphate treatments. The results demonstrated an evidently hormetic dose-response of M. wesenbergii to both chlorpyrifos and dichlorvos, where high dose (far beyond environmental concentrations) exposure caused growth inhibition and low dose exposure induced enhancement on physiological processes. The stimulating effect of two OPs on growth of M. wesenbergii was negligible under phosphate limitation.

Fluorescence of the various red antenna states in photosystem I complexes from cyanobacteria is affected differently by the redox state of P700.

PubMed

Schlodder, Eberhard; Hussels, Martin; Cetin, Marianne; Karapetyan, Navassard V; Brecht, Marc

2011-11-01

Photosystem I of cyanobacteria contains different spectral pools of chlorophylls called red or long-wavelength chlorophylls that absorb at longer wavelengths than the primary electron donor P700. We measured the fluorescence spectra at the ensemble and the single-molecule level at low temperatures in the presence of oxidized and reduced P700. In accordance with the literature, it was observed that the fluorescence is quenched by P700(+). However, the efficiency of the fluorescence quenching by oxidized P700(+) was found to be extremely different for the various red states in PS I from different cyanobacteria. The emission of the longest-wavelength absorbing antenna state in PS I trimers from Thermosynechococcus elongatus (absorption maximum at 5K: ≈ 719nm; emission maximum at 5K: ≈ 740nm) was found to be strongly quenched by P700(+) similar to the reddest state in PS I trimers from Arthrospira platensis emitting at 760nm at 5K. The fluorescence of these red states is diminished by more than a factor of 10 in the presence of oxidized P700. For the first time, the emission of the reddest states in A. platensis and T. elongatus has been monitored using single-molecule fluorescence techniques. 2011 Elsevier B.V. All rights reserved.

Distribution and potential sources and sinks of copper chelators in the Sargasso Sea

NASA Astrophysics Data System (ADS)

Moffett, J. W.; Zika, R. G.; Brand, L. E.

1990-01-01

Copper speciation has been studied at an oligotrophic station in the southwestern Sargasso Sea to determine the distribution of Cu binding ligands and evaluate their potential sources and sinks. Speciation was studied using a ligand exchange/liquid-liquid partition procedure used in a previous study in Florida coastal waters [ MOFFET and ZIKA (1987a) Marine Chemistry, 21, 301-313]. Copper speciation was dominated by organic complexation at all depths studied (16-950 m). Complexation was greatest in the region of the chlorophyll maximum. In this region, speciation was dominated by two ligands or ligand classes; L 1, with K cond. = 10 13.2, concentration = 2 nM, and a weaker but more abundant ligand class, L 2 with Kincond. = 10 9.7, concentration = 80 nM. From 140 to 16 m, [Cu(II)] free/[Cu(II)] total increases by a factor of 20, due to a decrease in [L 1] to a value below the ambient Cu concentration. Exposure of water from 140 m to sunlight indicated that photochemical decomposition of L 1 may account for the decrease. Below the chlorophyll maximum there is a gradual increase in [Cu(II)] free/[Cu(II)] total suggesting that the ligands are of recent biological origin rather than derived from refractory materials. Cultures of a ubiquitous marine cyanobacterium, Synechococcus sp. produced a ligand with K cond. comparable to L 1, indicating that a biological source is plausible.

Physiological and Biochemical Response of the Photosynthetic Apparatus of Two Marine Diatoms to Fe Stress.

PubMed Central

McKay, R. M. L.; Geider, R. J.; LaRoche, J.

1997-01-01

Flavodoxin is a small electron-transfer protein capable of replacing ferredoxin during periods of Fe deficiency. When evaluating the suitability of flavodoxin as a diagnostic indicator for Fe limitation of phytoplankton growth, we examined its expression in two marine diatoms we cultured using trace-metal-buffered medium. Thalassio-sira weissflogii and Phaeodactylum tricornutum were cultured in ethylenediaminetetraacetic acid-buffered Sargasso Sea water containing from 10 to 1000 nM added Fe. Trace-metal-buffered cultures of each diatom maintained high growth rates across the entire range of Fe additions. Similarly, declines in chlorophyll/cell and in the ratio of photosystem II variable-to-maximum fluorescence were negligible (P. tricornutum) to moderate (T. weissflogii; 54% decline in chlorophyll/cell and 22% decrease in variable-to-maximum fluorescence). Moreover, only minor variations in photosynthetic parameters were observed across the range of additions. In contrast, flavodoxin was expressed to high levels in low-Fe cultures. Despite the inverse relationship between flavodoxin expression and Fe content of the medium, its expression was seemingly independent of any of the indicators of cell physiology that were assayed. It appears that flavodoxin is expressed as an early-stage response to Fe stress and that its accumulation need not be intimately connected to limitations imposed by Fe on the growth rate of these diatoms. PMID:12223732

Temporal and Spatial Patterns of Plankton and Microbial Dynamics in the Offshore Gulf of Mexico After the Deepwater Horizon Oil Spill

NASA Astrophysics Data System (ADS)

Sutor, M.; Longnecker, K.

2016-02-01

The oligotrophic regions of the world oceans represent large and important marine ecosystems. The vast majority of animals in these zones are plankton and marine microbes and they play a key role in the export of carbon and organic matter to seafloor benthic communities and higher trophic levels. There is little published data on the ecology of plankton and microbes in the offshore waters of the Northern Gulf of Mexico. In the wake of the Deepwater Horizon oil spill, which was a primarily oceanic event, it is clear that understanding the microbial and planktonic community and how it responded to this event is critical to interpret any observed changes at higher trophic levels (i.e. fish). We conducted three cruises in the spring of 2011, 2012, and 2013 and measured the primary production, respiration, bacterial production, and community composition of plankton and marine microbes. The data show that there are important differences in these parameters between the surface waters and the deep chlorophyll maximum and proximity to the spill site in 2011. Spatial patterns in relation to the spill site are not pronounced in 2012 and 2013. These data represent an important estimate of the microbial and planktonic community ecology of this region and demonstrate the important role the deep chlorophyll maximum plays in this system.

Establishment of integrated protocols for automated high throughput kinetic chlorophyll fluorescence analyses.

PubMed

Tschiersch, Henning; Junker, Astrid; Meyer, Rhonda C; Altmann, Thomas

2017-01-01

Automated plant phenotyping has been established as a powerful new tool in studying plant growth, development and response to various types of biotic or abiotic stressors. Respective facilities mainly apply non-invasive imaging based methods, which enable the continuous quantification of the dynamics of plant growth and physiology during developmental progression. However, especially for plants of larger size, integrative, automated and high throughput measurements of complex physiological parameters such as photosystem II efficiency determined through kinetic chlorophyll fluorescence analysis remain a challenge. We present the technical installations and the establishment of experimental procedures that allow the integrated high throughput imaging of all commonly determined PSII parameters for small and large plants using kinetic chlorophyll fluorescence imaging systems (FluorCam, PSI) integrated into automated phenotyping facilities (Scanalyzer, LemnaTec). Besides determination of the maximum PSII efficiency, we focused on implementation of high throughput amenable protocols recording PSII operating efficiency (Φ PSII ). Using the presented setup, this parameter is shown to be reproducibly measured in differently sized plants despite the corresponding variation in distance between plants and light source that caused small differences in incident light intensity. Values of Φ PSII obtained with the automated chlorophyll fluorescence imaging setup correlated very well with conventionally determined data using a spot-measuring chlorophyll fluorometer. The established high throughput operating protocols enable the screening of up to 1080 small and 184 large plants per hour, respectively. The application of the implemented high throughput protocols is demonstrated in screening experiments performed with large Arabidopsis and maize populations assessing natural variation in PSII efficiency. The incorporation of imaging systems suitable for kinetic chlorophyll fluorescence analysis leads to a substantial extension of the feature spectrum to be assessed in the presented high throughput automated plant phenotyping platforms, thus enabling the simultaneous assessment of plant architectural and biomass-related traits and their relations to physiological features such as PSII operating efficiency. The implemented high throughput protocols are applicable to a broad spectrum of model and crop plants of different sizes (up to 1.80 m height) and architectures. The deeper understanding of the relation of plant architecture, biomass formation and photosynthetic efficiency has a great potential with respect to crop and yield improvement strategies.

Physiological responses to nitrogen and sulphur addition and raised temperature in Sphagnum balticum.

PubMed

Granath, Gustaf; Wiedermann, Magdalena M; Strengbom, Joachim

2009-09-01

Sphagnum, the main genus which forms boreal peat, is strongly affected by N and S deposition and raised temperature, but the physiological mechanisms behind the responses are largely unknown. We measured maximum photosynthetic rate (NP(max)), maximum efficiency of photosystem II [variable fluorescence (F (v))/maximum fluorescence yield (F (m))] and concentrations of N, C, chlorophyll and carotenoids as responses to N and S addition and increased temperature in Sphagnum balticum (a widespread species in the northern peatlands) in a 12-year factorial experiment. NP(max) did not differ between control (0.2 g N m(-2) year(-1)) and high N (3.0 g N m(-2) year(-1)), but was higher in the mid N treatment (1.5 g N m(-2) year(-1)). N, C, carotenoids and chlorophyll concentration increased in shoot apices after N addition. F (v)/F (m) did not differ between N treatments. Increased temperature (+3.6 degrees C) had a small negative effect on N concentration, but had no significant effect on NP(max) or F (v)/F (m). Addition of 2 g S m(-2) year(-1) showed a weak negative effect on NP(max) and F (v)/F (m). Our results suggest a unimodal response of NP(max) to N addition and tissue N concentration in S. balticum, with an optimum N concentration for photosynthetic rate of ~13 mg N g(-1). In conclusion, high S deposition may reduce photosynthetic capacity in Sphagnum, but the negative effects may be relaxed under high N availability. We suggest that previously reported negative effects on Sphagnum productivity under high N deposition are not related to negative effects on the photosynthetic apparatus, but differences in optimum N concentration among Sphagnum species may affect their competitive ability under different N deposition regimes.

Impact of Monsoon to Aquatic Productivity and Fish Landing at Pesawaran Regency Waters

NASA Astrophysics Data System (ADS)

Kunarso; Zainuri, Muhammad; Ario, Raden; Munandar, Bayu; Prayogi, Harmon

2018-02-01

Monsoon variability influences the productivity processes in the ocean and has different responses in each waters. Furthermore, variability of marine productivity affects to the fisheries resources fluctuation. This research has conducted using descriptive method to investigate the consequences of monsoon variability to aquatic productivity, sea surface temperature (SST), fish catches, and fish season periods at Pesawaran Regency waters, Lampung. Variability of aquatic productivity was determined based on chlorophyll-a indicator from MODIS satellite images. Monsoon variability was governed based on wind parameters and fish catches from fish landing data of Pesawaran fish market. The result showed that monsoon variability had affected to aquatic productivity, SST, and fish catches at Pesawaran Regency waters. Maximum wind speed and lowest SST occurred twice in a year, December to March and August to October, which the peaks were on January (2.55 m/s of wind speed and 29.66°C of SST) and September (2.44 m/s of wind speed and 29.06°C of SST). Also, Maximum aquatic productivity happened on January to March and July to September, which it was arisen simultaneously with maximum wind speed and the peaks was 0.74 mg/m3 and 0.78 mg/m3, on February and August respectively. The data showed that fish catches decreased along with strong wind speed and low SST. However, when weak wind speed and high SST occurred, fish catches increased. The correlation between Catch per Unit Effort (CPUE) with SST, wind speed, and chlorophyll-a was at value 0.76, -0.67, and -0.70, respectively. The high rate fish catches in Pesawaran emerged on March-May and September-December.

Assessing spatial and temporal variability of phytoplankton communities' composition in the Iroise Sea ecosystem (Brittany, France): A 3D modeling approach. Part 2: Linking summer mesoscale distribution of phenotypic diversity to hydrodynamism

NASA Astrophysics Data System (ADS)

Cadier, Mathilde; Sourisseau, Marc; Gorgues, Thomas; Edwards, Christopher A.; Memery, Laurent

2017-05-01

Tidal front ecosystems are especially dynamic environments usually characterized by high phytoplankton biomass and high primary production. However, the description of functional microbial diversity occurring in these regions remains only partially documented. In this article, we use a numerical model, simulating a large number of phytoplankton phenotypes to explore the three-dimensional spatial patterns of phytoplankton abundance and diversity in the Iroise Sea (western Brittany). Our results suggest that, in boreal summer, a seasonally marked tidal front shapes the phytoplankton species richness. A diversity maximum is found in the surface mixed layer located slightly west of the tidal front (i.e., not strictly co-localized with high biomass concentrations) which separates tidally mixed from stratified waters. Differences in phenotypic composition between sub-regions with distinct hydrodynamic regimes (defined by vertical mixing, nutrients gradients and light penetration) are discussed. Local growth and/or physical transport of phytoplankton phenotypes are shown to explain our simulated diversity distribution. We find that a large fraction (64%) of phenotypes present during the considered period of September are ubiquitous, found in the frontal area and on both sides of the front (i.e., over the full simulated domain). The frontal area does not exhibit significant differences between its community composition and that of either the well-mixed region or an offshore Deep Chlorophyll Maximum (DCM). Only three phenotypes (out of 77) specifically grow locally and are found at substantial concentration only in the surface diversity maximum. Thus, this diversity maximum is composed of a combination of ubiquitous phenotypes with specific picoplankton deriving from offshore, stratified waters (including specific phenotypes from both the surface and the DCM) and imported through physical transport, completed by a few local phenotypes. These results are discussed in light of the three-dimensional general circulation at frontal interfaces. Processes identified by this study are likely to be common in tidal front environments and may be generalized to other shallow, tidally mixed environments worldwide.

The Northeast Monsoon's Impact on Mixing, Phytoplankton Biomass and Nutrient Cycling in the Arabian Sea

NASA Technical Reports Server (NTRS)

Wiggert, J. D.; Jones, B. H.; Dickey, T. D.; Brink, K. H.; Weller, R. A.; Marra, J.; Codispoti, L. A.

2000-01-01

In the northern Arabian Sea, atmospheric conditions during the Northeast (winter) Monsoon lead to deep convective mixing. Due to the proximity of the permanent pyncnocline to the sea surface, this mixing does not penetrate below 125 m. However, a strong nitracline is also present and the deep convection results in significant nitrate flux into the surface waters. This leads to nitrate concentrations over the upper 100 m that exceed 4 micrometers toward the end of the Monsoon. During the 1994/1995 US JGOFS/Arabian Sea expedition, the mean areal gross primary production over two successive Northeast Monsoons was determined to be 1.35gC/sq m/d. Thus, despite the deep penetrative convection, high rates of primary productivity were maintained. An interdisciplinary model was developed to elucidate the biogeochemical processes involved in supporting the elevated productivity. This model consists of a 1-D mixed-layer model coupled to a set of equations that tracked phytoplankton growth and the concentration of the two major nutrients (nitrate and ammonium). Zooplankton grazing was parameterized by rate constant determined by shipboard experiments. Model boundary conditions consist of meteorological time-series measured from the surface buoy that was part of the ONR Arabian Sea Experiment's central mooring. Our numerical experiments show that elevated surface evaporation, and the associated salinization of the mixed layer, strongly contributes to the frequency and penetration depth of the observed convective mixing. Cooler surface temperatures, increased nitrate entrainment, reduced water column stratification, and lower near-surface chlorophyll a concentrations all result from this enhanced mixing. The model also captured a dependence on regenerated nitrogen observed in nutrient uptake experiments performed during the Northeast Monsoon. Our numerical experiments also indicate that variability in mean pycnocline depth causes up to a 25% reduction in areal chlorophyll a concentration. We hypothesize that such shifts in pycnocline depth may contribute to the interannual variations in primary production and surface chlorophyll a concentration that have been previously observed in this region.

The Role of Model Complexity in Determining Patterns of Chlorophyll Variability in the Coastal Northwest North Atlantic

NASA Astrophysics Data System (ADS)

Kuhn, A. M.; Fennel, K.; Bianucci, L.

2016-02-01

A key feature of the North Atlantic Ocean's biological dynamics is the annual phytoplankton spring bloom. In the region comprising the continental shelf and adjacent deep ocean of the northwest North Atlantic, we identified two patterns of bloom development: 1) locations with cold temperatures and deep winter mixed layers, where the spring bloom peaks around April and the annual chlorophyll cycle has a large amplitude, and 2) locations with warmer temperatures and shallow winter mixed layers, where the spring bloom peaks earlier in the year, sometimes indiscernible from the fall bloom. These patterns result from a combination of limiting environmental factors and interactions among planktonic groups with different optimal requirements. Simple models that represent the ecosystem with a single phytoplankton (P) and a single zooplankton (Z) group are challenged to reproduce these ecological interactions. Here we investigate the effect that added complexity has on determining spatio-temporal chlorophyll. We compare two ecosystem models, one that contains one P and one Z group, and one with two P and three Z groups. We consider three types of changes in complexity: 1) added dependencies among variables (e.g., temperature dependent rates), 2) modified structural pathways, and 3) added pathways. Subsets of the most sensitive parameters are optimized in each model to replicate observations in the region. For computational efficiency, the parameter optimization is performed using 1D surrogates of a 3D model. We evaluate how model complexity affects model skill, and whether the optimized parameter sets found for each model modify the interpretation of ecosystem functioning. Spatial differences in the parameter sets that best represent different areas hint at the existence of different ecological communities or at physical-biological interactions that are not represented in the simplest model. Our methodology emphasizes the combined use of observations, 1D models to help identifying patterns, and 3D models able to simulate the environment modre realistically, as a means to acquire predictive understanding of the ocean's ecology.

Upper ocean stratification and sea ice growth rates during the summer-fall transition, as revealed by Elephant seal foraging in the Adélie Depression, East Antarctica

NASA Astrophysics Data System (ADS)

Williams, G. D.; Hindell, M.; Houssais, M.-N.; Tamura, T.; Field, I. C.

2011-03-01

Southern elephant seals (Mirounga leonina), fitted with Conductivity-Temperature-Depth sensors at Macquarie Island in January 2005 and 2010, collected unique oceanographic observations of the Adélie and George V Land continental shelf (140-148° E) during the summer-fall transition (late February through April). This is a key region of dense shelf water formation from enhanced sea ice growth/brine rejection in the local coastal polynyas. In 2005, two seals occupied the continental shelf break near the grounded icebergs at the northern end of the Mertz Glacier Tongue for several weeks from the end of February. One of the seals migrated west to the Dibble Ice Tongue, apparently utilising the Antarctic Slope Front current near the continental shelf break. In 2010, immediately after that year's calving of the Mertz Glacier Tongue, two seals migrated to the same region but penetrated much further southwest across the Adélie Depression and sampled the Commonwealth Bay polynya from March through April. Here we present observations of the regional oceanography during the summer-fall transition, in particular (i) the zonal distribution of modified Circumpolar Deep Water exchange across the shelf break, (ii) the upper ocean stratification across the Adélie Depression, including alongside iceberg C-28 that calved from the Mertz Glacier and (iii) the convective overturning of the deep remnant seasonal mixed layer in Commonwealth Bay from sea ice growth. Heat and freshwater budgets to 200-300 m are used to estimate the ocean heat content (400→50 MJ m-2), flux (50-200 W m-2 loss) and sea ice growth rates (maximum of 7.5-12.5 cm day-1). Mean seal-derived sea ice growth rates were within the range of satellite-derived estimates from 1992-2007 using ERA-Interim data. We speculate that the continuous foraging by the seals within Commonwealth Bay during the summer/fall transition was due to favorable feeding conditions resulting from the convective overturning of the deep seasonal mixed layer and chlorophyll maximum that is a reported feature of this location.

Are the spring and fall blooms on the Scotian Shelf related to short-term physical events?

NASA Astrophysics Data System (ADS)

Greenan, B. J. W.; Petrie, B. D.; Harrison, W. G.; Oakey, N. S.

2004-03-01

Physical, chemical and biological data from the Scotian Shelf indicate that short-term physical events affect the dynamics of spring and fall blooms. This is based on results from a three-week mooring deployment measuring currents, temperature, salinity and fluorescence in October 2000, combined with biweekly sampling of temperature, salinity, nutrients and chlorophyll throughout the year at this mooring site. A wind-driven upwelling event in mid-October shows temperature, salinity and density iso-surfaces rising by approximately 20 m. During this event, a bloom with peak chlorophyll concentrations of about 2.5 mg m -3 began as nutrients are brought into the upper part of the water column. Gradient Richardson Numbers ( Ri), a proxy for vertical mixing, are estimated for the mooring period in 2 m vertical bins using SeaHorse CTD data and nearby ADCP current measurements. These data indicate that vertical mixing may have played a complementary role to the upwelling in bringing nutrients into the euphotic zone. A trend of decreasing Ri in the ocean mixed layer with increasing surface wind stress is suggested. It appears that this short-term physical event is a primary factor in initiating the fall bloom on the inner Scotian Shelf in 2000. In April of that year, the termination of the spring bloom coincided with a downwelling event suggesting that it played a role in determining the duration of the bloom. SeaWiFS ocean color satellite provided a spatial context for chlorophyll observations, however, the lack of temporal resolution due to poor atmospheric conditions means that these data provide limited information on short-term chlorophyll variability.

Recurrent seascape units identify key ecological processes along the western Antarctic Peninsula.

PubMed

Bowman, Jeff S; Kavanaugh, Maria T; Doney, Scott C; Ducklow, Hugh W

2018-04-10

The western Antarctic Peninsula (WAP) is a bellwether of global climate change and natural laboratory for identifying interactions between climate and ecosystems. The Palmer Long-Term Ecological Research (LTER) project has collected data on key ecological and environmental processes along the WAP since 1993. To better understand how key ecological parameters are changing across space and time, we developed a novel seascape classification approach based on in situ temperature, salinity, chlorophyll a, nitrate + nitrite, phosphate, and silicate. We anticipate that this approach will be broadly applicable to other geographical areas. Through the application of self-organizing maps (SOMs), we identified eight recurrent seascape units (SUs) in these data. These SUs have strong fidelity to known regional water masses but with an additional layer of biogeochemical detail, allowing us to identify multiple distinct nutrient profiles in several water masses. To identify the temporal and spatial distribution of these SUs, we mapped them across the Palmer LTER sampling grid via objective mapping of the original parameters. Analysis of the abundance and distribution of SUs since 1993 suggests two year types characterized by the partitioning of chlorophyll a into SUs with different spatial characteristics. By developing generalized linear models for correlated, time-lagged external drivers, we conclude that early spring sea ice conditions exert a strong influence on the distribution of chlorophyll a and nutrients along the WAP, but not necessarily the total chlorophyll a inventory. Because the distribution and density of phytoplankton biomass can have an impact on biomass transfer to the upper trophic levels, these results highlight anticipated links between the WAP marine ecosystem and climate. © 2018 John Wiley & Sons Ltd.

Concentrations and cycling of DMS, DMSP, and DMSO in coastal and offshore waters of the Subarctic Pacific during summer, 2010-2011

NASA Astrophysics Data System (ADS)

Asher, Elizabeth; Dacey, John W.; Ianson, Debby; Peña, Angelica; Tortell, Philippe D.

2017-04-01

Concentrations of dimethylsulfide (DMS), measured in the Subarctic Pacific during summer 2010 and 2011, ranged from ˜1 to 40 nM, while dissolved dimethylsulfoxide (DMSO) concentrations (range 13-23 nM) exceeded those of dissolved dimethyl sulfoniopropionate (DMSP) (range 1.3-8.8 nM). Particulate DMSP dominated the reduced sulfur pool, reaching maximum concentrations of 100 nM. Coastal and off shore waters exhibited similar overall DMS concentration ranges, but sea-air DMS fluxes were lower in the oceanic waters due to lower wind speeds. Surface DMS concentrations showed statistically significant correlations with various hydrographic variables including the upwelling intensity (r2 = 0.52, p < 0.001) and the Chlorophyll a/mixed layer depth ratio (r2 = 0.52, p < 0.001), but these relationships provided little predictive power at small scales. Stable isotope tracer experiments indicated that the DMSP cleavage pathway always exceeded the DMSO reduction pathway as a DMS source, leading to at least 85% more DMS production in each experiment. Gross DMS production rates were positively correlated with the upwelling intensity, while net rates of DMS production were significantly correlated to surface water DMS concentrations. This latter result suggests that our measurements captured dominant processes driving surface DMS accumulation across a coastal-oceanic gradient.

Light-Dependent Aerobic Methane Oxidation Reduces Methane Emissions from Seasonally Stratified Lakes

PubMed Central

Oswald, Kirsten; Milucka, Jana; Brand, Andreas; Littmann, Sten; Wehrli, Bernhard; Kuypers, Marcel M. M.; Schubert, Carsten J.

2015-01-01

Lakes are a natural source of methane to the atmosphere and contribute significantly to total emissions compared to the oceans. Controls on methane emissions from lake surfaces, particularly biotic processes within anoxic hypolimnia, are only partially understood. Here we investigated biological methane oxidation in the water column of the seasonally stratified Lake Rotsee. A zone of methane oxidation extending from the oxic/anoxic interface into anoxic waters was identified by chemical profiling of oxygen, methane and δ13C of methane. Incubation experiments with 13C-methane yielded highest oxidation rates within the oxycline, and comparable rates were measured in anoxic waters. Despite predominantly anoxic conditions within the zone of methane oxidation, known groups of anaerobic methanotrophic archaea were conspicuously absent. Instead, aerobic gammaproteobacterial methanotrophs were identified as the active methane oxidizers. In addition, continuous oxidation and maximum rates always occurred under light conditions. These findings, along with the detection of chlorophyll a, suggest that aerobic methane oxidation is tightly coupled to light-dependent photosynthetic oxygen production both at the oxycline and in the anoxic bottom layer. It is likely that this interaction between oxygenic phototrophs and aerobic methanotrophs represents a widespread mechanism by which methane is oxidized in lake water, thus diminishing its release into the atmosphere. PMID:26193458

Horizontal and Vertical Distributions of Transparent Exopolymer Particles (TEP) in the NW Mediterranean Sea Are Linked to Chlorophyll a and O2 Variability

PubMed Central

Ortega-Retuerta, Eva; Sala, Maria M.; Borrull, Encarna; Mestre, Mireia; Aparicio, Fran L.; Gallisai, Rachele; Antequera, Carolina; Marrasé, Cèlia; Peters, Francesc; Simó, Rafel; Gasol, Josep M.

2017-01-01

Transparent Exopolymer Particles (TEP) are relevant in particle and carbon fluxes in the ocean, and have economic impact in the desalination industry affecting reverse osmosis membrane fouling. However, general models of their occurrence and dynamics are not yet possible because of the poorly known co-variations with other physical and biological variables. Here, we describe TEP distributions in the NW Mediterranean Sea during late spring 2012, along perpendicular and parallel transects to the Catalan coast. The stations in the parallel transect were sampled at the surface, while the stations in the perpendicular transect were sampled from the surface to the bathypelagic, including the bottom nepheloid layers. We also followed the short-term TEP dynamics along a 2-day cycle in offshore waters. TEP concentrations in the area ranged from 4.9 to 122.8 and averaged 31.4 ± 12.0 μg XG eq L−1. The distribution of TEP measured in transects parallel to the Catalan Coast correlated those of chlorophyll a (Chla) in May but not in June, when higher TEP-values with respect to Chla were observed. TEP horizontal variability in epipelagic waters from the coast to the open sea also correlated to that of Chla, O2 (that we interpret as a proxy of primary production) and bacterial production (BP). In contrast, the TEP vertical distributions in epipelagic waters were uncoupled from those of Chla, as TEP maxima were located above the deep chlorophyll maxima. The vertical distribution of TEP in the epipelagic zone was correlated with O2 and BP, suggesting combined phytoplankton (through primary production) and bacterial (through carbon reprocessing) TEP sources. However, no clear temporal patterns arose during the 2-day cycle. In meso- and bathypelagic waters, where phytoplanktonic sources are minor, TEP concentrations (10.1 ± 4.3 μg XG eq l−1) were half those in the epipelagic, but we observed relative TEP increments coinciding with the presence of nepheloid layers. These TEP increases were not paralleled by increases in particulate organic carbon, indicating that TEP are likely to act as aggregating agents of the mostly inorganic particles present in these bottom nepheloid layers. PMID:28197126

Early stage de-etiolation increases the ferulic acid content in winter triticale seedlings under full sunlight conditions.

PubMed

Hura, Tomasz; Hura, Katarzyna; Grzesiak, Maciej

2010-12-02

In the presented work an attempt has been made to estimate the phenolics content and its implication for the protection of the photosynthetic apparatus in course of a plant's de-etiolation. The experiments were carried out on two genotypes of winter triticale varying in their resistance to drought. The activity of the photosynthetic apparatus was monitored by taking measurements of chlorophyll fluorescence and chlorophyll/carotenoids content. Analyses of the total pool of phenolic compounds and ferulic acid as well as l-phenylalanine ammonia lyase activity were completed. The first illuminations of etiolated seedlings induced a chlorophyll synthesis, which was followed by the increasing activity of the photosynthetic apparatus in both studied genotypes. Piano exhibited a higher values of the maximum quantum efficiency of photosystem II primary photochemistry during de-etiolation than Imperial. These results may just indicate that for Imperial, the delivery of photons to the reaction centres exceeded the capacity of the photosynthetic apparatus to transduce this energy via electron transport. An increase in the content of ferulic acid was more noticeable for Piano and seems to be a consequence of adaptation to the new light conditions. It should be taken into account, that an increase of ferulic acid content during early stage of de-etiolation, may limit the photoinhibition of photosynthesis whenever radiation is excessive for the photosynthetic apparatus. Copyright © 2010 Elsevier B.V. All rights reserved.

Assessment of remotely sensed chlorophyll-a concentration in Guanabara Bay, Brazil

NASA Astrophysics Data System (ADS)

Oliveira, Eduardo N.; Fernandes, Alexandre M.; Kampel, Milton; Cordeiro, Renato C.; Brandini, Nilva; Vinzon, Susana B.; Grassi, Renata M.; Pinto, Fernando N.; Fillipo, Alessandro M.; Paranhos, Rodolfo

2016-04-01

The Guanabara Bay (GB) is an estuarine system in the metropolitan region of Rio de Janeiro (Brazil), with a surface area of ˜346 km2 threatened by anthropogenic pressure. Remote sensing can provide frequent data for studies and monitoring of water quality parameters, such as chlorophyll-a concentration (Chl-a). Different combination of Medium Resolution Imaging Spectrometer (MERIS) remote sensing reflectance band ratios were used to estimate Chl-a. Standard algorithms such as Ocean Color 3-band, Ocean Color-4 band, fluorescence line height, and maximum chlorophyll index were also tested. The MERIS Chl-a estimates were statistically compared with a dataset of in situ Chl-a (2002 to 2012). Good correlations were obtained with the use of green, red, and near-infrared bands. The best performing algorithm was based on the red (665 nm) and green (560 nm) band ratio, named "RG3" algorithm (r2=0.71, chl-a=62,565*x1.6118). The RG3 was applied to a time series of MERIS images (2003- to 2012). The GB has a high temporal and spatial variability of Chl-a, with highest values found in the wet season (October to March) and in some of the most internal regions of the estuary. Lowest concentrations are found in the central circulation channel due to the flushing of ocean water masses promoted by pumping tide.

Photosynthetic Physiological Response of Radix Isatidis (Isatis indigotica Fort.) Seedlings to Nicosulfuron

PubMed Central

Ning, Na; Wen, Yinyuan; Dong, Shuqi; Yin, Meiqiang; Guo, Meijun; Wang, Binqiang; Feng, Lei; Guo, Pingyi

2014-01-01

Radix Isatidis (Isatis indigotica Fort.) is one of the most important traditional Chinese medicine plants. However, there is no suitable herbicide used for weed control in Radix Isatidis field during postemergence stage. To explore the safety of sulfonylurea herbicide nicosulfuron on Radix Isatidis (Isatis indigotica Fort.) seedlings and the photosynthetic physiological response of the plant to the herbicide, biological mass, leaf area, photosynthetic pigment content, photosynthetic rate, chlorophyll fluorescence characteristics, and P700 parameters of Radix Isatidis seedlings were analyzed 10 d after nicosulfuron treatment at 5th leaf stage in this greenhouse research. The results showed that biological mass, total chlorophyll, chlorophyll a, and carotenoids content, photosynthetic rate, stomatal conductance, PS II maximum quantum yield, PS II effective quantum yield, PS II electron transport rate, photochemical quenching, maximal P700 change, photochemical quantum yield of PS I, and PS I electron transport rate decreased with increasing herbicide concentrations, whereas initial fluorescence, quantum yield of non-regulated energy dissipation in PS II and quantum yield of non-photochemical energy dissipation due to acceptor side limitation in PS I increased. It suggests that nicosulfuron ≥1 mg L−1 causes the damage of chloroplast, PS II and PS I structure. Electron transport limitations in PS I receptor side, and blocked dark reaction process may be the main cause of the significantly inhibited growth and decreased photosynthetic rate of Radix Isatidis seedlings. PMID:25165819

Imaging of fast chlorophyll fluorescence induction curve (OJIP) parameters, applied in a screening study with wild barley (Hordeum spontaneum) genotypes under heat stress.

PubMed

Jedmowski, Christoph; Brüggemann, Wolfgang

2015-10-01

We quantified the influence of heat stress (HS) on PSII by imaging of parameters of the fast chlorophyll fluorescence (CF) induction (OJIP) kinetic of 20 genotypes of wild barley (Hordeum spontaneum) covering a broad geographical spectrum. We developed a standardised screening procedure, allowing a repetitive fluorescence measurement of leaf segments. The impact of HS was quantified by calculating a Heat Resistance Index (HRI), derived from the decrease of the Performance Index (PI) caused by HS treatment and following recovery. For the genotype showing the lowest HRI, reduced maximum quantum yield (φP0) and increased relative variable fluorescence of the O-J phase (K-Peak) were detected after HS, whereas the basal fluorescence (F0) remained stable. An additional feature was a lowered fraction of active (QA-reducing) reaction centres (RCs). The disturbances disappeared after one day of recovery. Spatial heterogeneities of fluorescence parameters were detected, as the negative effect of HS was stronger in the leaf areas close to the leaf tip. The results of this study prove that chlorophyll fluorescence imaging (CFI) is suitable for the detection of HS symptoms and that imaging of JIP-Test parameters should be considered in future screening and phenotyping studies aiming for the characterisation of plant genotypes. Copyright © 2015 Elsevier B.V. All rights reserved.

Strategies of leaf expansion in Ficus carica under semiarid conditions.

PubMed

González-Rodríguez, A M; Peters, J

2010-05-01

Leaf area expansion, thickness and inclination, gas exchange parameters and relative chlorophyll content were analysed in field-grown fig (Ficus carica L.) leaves over time, from emergence until after full leaf expansion (FLE). Ficus carica leaves showed a subtle change in shape during the early stages of development, and FLE was reached within ca. 30 days after emergence. Changes in leaf thickness and inclination after FLE demonstrated good adaptation to environmental conditions during summer in areas with a Mediterranean climate. Changes in gas exchange parameters and relative chlorophyll content showed that F. carica is a delayed-greening species, reaching maximum values 20 days after FLE. Correlation analysis of datasets collected during leaf expansion, confirmed dependence among structural and functional traits in F. carica. Pn was directly correlated with stomatal conductance (Gs), transpiration (E), leaf area (LA) and relative chlorophyll content up to FLE. The effect of pruning on leaf expansion, a cultural technique commonly applied in this fruit tree, was also evaluated. Although leaf development in pruned branches gave a significantly higher relative leaf area growth rate (RGR(l)) and higher LA than non-pruned branches, no significant differences were found in other morphological and physiological traits, indicating no pruning effect on leaf development. All studied morphological and physiological characteristics indicate that F. carica is well adapted to semiarid conditions. The delayed greening strategy of this species is discussed.

A simple fiber-optic microprobe for high resolution light measurements: application in marine sediment

NASA Technical Reports Server (NTRS)

Jorgensen, B. B.; Des Marais, D. J.

1986-01-01

A fiber-optic microphobe is described which is inexpensive and simple to build and use. It consists of an 80-micrometers optical fiber which at the end is tapered down to a rounded sensing tip of 20-30-micrometers diameter. The detector is a hybrid photodiode/amplifier. The probe has a sensitivity of 0.01 microEinst m-2 s-1 and a spectral range of 300-1,100 nm. Spectral light gradients were measured in fine-grained San Francisco Bay sediment that had an undisturbed diatom coating on the surface. The photic zone of the mud was only 0.4 mm deep. Measured in situ spectra showed extinction maxima at 430-520, 620-630, 670, and 825-850 nm due to absorption by chlorophyll a, carotenoids, phycocyanin, and bacterio-chlorophyll a. Maximum light penetration in the visible range was found in both the violet and the red < or = 400 and > or = 700 nm.

Using Survey Data to Determine a Numeric Criterion for Nutrient Pollution

NASA Astrophysics Data System (ADS)

Jakus, Paul M.; Nelson, Nanette; Ostermiller, Jeffrey

2017-12-01

We present a scientific replication of a benthic algae nuisance threshold study originally conducted in Montana, but we do so using a different sampling methodology in a different state. Respondents are asked to rate eight photographs that depict varying algae conditions. Our initial results show that Utah resident preferences for benthic algae levels are quite similar to those of Montana residents, thus replicating the Montana study. For the full Utah sample, though, Cronbach's α indicated poor internal consistency in rating the photographs, so a "monotonicity rule" was used to identify respondents providing monotonic preferences with respect to chlorophyll a densities. Simple graphical analyses are combined with ordered probit analysis to determine the maximum desirable density of chlorophyll a (Chl a). Our analysis indicates that Chl a levels in excess of 150 mg Chl a/m2 are undesirable, but the regression model suggests that those with strictly monotonic preferences were far more likely favor a more stringent standard.

Bibliography of Research on Ocean Fronts, 1964-1984

DTIC Science & Technology

1985-08-01

water masses which exhibit notable differences in temperature, salinity , chlorophyll and other properties. One example of an ocean front is the...Phil. Trans. R. Soc. Lond. A302: 617-634. Amos, A.F., M.G. Langseth and R.G. Markl. 1972. Visible oceanic saline fronts, p. 49-62. In A.L. Gordon...On the mechanism of the deep mixed layer formation during MEDOC 1969. Cahiers Oceanogr. XXII: 427-442. Anderson, F.E. 1980. The variation in

Defining the Habitat of Pacific Tuna of the Eastern Tropical Pacific from Satellite Imagery, Climatologies, and a Global Circulation Model

NASA Astrophysics Data System (ADS)

Kiefer, D. A.; Hinton, M. G.; Armstrong, E. M.; Harrison, D. P.; Menemenlis, D.; Hu, C.

2016-02-01

With support from NASA's Ecological Forecasting program, we have developed a Tuna Stock Assessment Support System, which merges time series of satellite imagery, a global ocean circulation model, climatology from field surveys, and fisheries data on catch and effort. The purpose of this software is to extract information on the habitat of skipjack, bigeye, and yellowfin tuna in the Eastern Tropical Pacific. The support system is based upon a 50-year record of catch and effort from long-line and purse seine vessels provide by the Inter-American Tropical Tuna Commission. This database, which covers thousands of kilometers of ocean surface, provides monthly information at a 1 degree spatial resolution for the purse seine fleet and 5 degree resolution for the long line fishery. This data is then merged in time and space with satellite imagery of sea surface temperature, chlorophyll, and height, as well as NODC climatologies of oxygen concentration and temperature, and output from NASA's ECCO-2 global circulation model, which provides 3-dimensional simulations of water density, current velocity, mixed layer depth, and sea surface height. Our analyses have yielded a broad range of understanding of the habitat and dynamics both the fish and the fisherman. The purse seine ground, which targets younger tuna, is constrained to waters where the hypoxic layer is shallow. The longline fishery, which targets older tuna, is not constrained by the hypoxic layer and has a much larger distribution. We have characterized the preferences of each species to environmental variables including the depth of the hypoxic layer, the depth of the water column, as well as sea surface height, temperature, and chlorophyll concentration. Finally, the analyses have revealed information on local depletion by fishing, the size distribution of the schools of younger fish, and the impact of ENSO on fishing activities.

Unique chlorophylls in picoplankton Prochlorococcus sp. "Physicochemical properties of divinyl chlorophylls, and the discovery of monovinyl chlorophyll b as well as divinyl chlorophyll b in the species Prochlorococcus NIES-2086".

PubMed

Komatsu, Hirohisa; Wada, Katsuhiro; Kanjoh, Terumitsu; Miyashita, Hideaki; Sato, Mayumi; Kawachi, Masanobu; Kobayashi, Masami

2016-12-01

In this review, we introduce our recent studies on divinyl chlorophylls functioning in unique marine picoplankton Prochlorococcus sp. (1) Essential physicochemical properties of divinyl chlorophylls are compared with those of monovinyl chlorophylls; separation by normal-phase and reversed-phase high-performance liquid chromatography with isocratic eluent mode, absorption spectra in four organic solvents, fluorescence information (emission spectra, quantum yields, and life time), circular dichroism spectra, mass spectra, nuclear magnetic resonance spectra, and redox potentials. The presence of a mass difference of 278 in the mass spectra between [M+H] + and the ions indicates the presence of a phytyl tail in all the chlorophylls. (2) Precise high-performance liquid chromatography analyses show divinyl chlorophyll a' and divinyl pheophytin a as the minor key components in four kinds of Prochlorococcus sp.; neither monovinyl chlorophyll a' nor monovinyl pheophytin a is detected, suggesting that the special pair in photosystem I and the primary electron acceptor in photosystem II are not monovinyl but divinyl-type chlorophylls. (3) Only Prochlorococcus sp. NIES-2086 possesses both monovinyl chlorophyll b and divinyl chlorophyll b, while any other monovinyl-type chlorophylls are absent in this strain. Monovinyl chlorophyll b is not detected at all in the other three strains. Prochlorococcus sp. NIES-2086 is the first example that has both monovinyl chlorophyll b as well as divinyl chlorophylls a/b as major chlorophylls.

Identification of Genes Associated with Chlorophyll Accumulation in Flower Petals

PubMed Central

Ohmiya, Akemi; Hirashima, Masumi; Yagi, Masafumi; Tanase, Koji; Yamamizo, Chihiro

2014-01-01

Plants have an ability to prevent chlorophyll accumulation, which would mask the bright flower color, in their petals. In contrast, leaves contain substantial amounts of chlorophyll, as it is essential for photosynthesis. The mechanisms of organ-specific chlorophyll accumulation are unknown. To identify factors that determine the chlorophyll content in petals, we compared the expression of genes related to chlorophyll metabolism in different stages of non-green (red and white) petals (very low chlorophyll content), pale-green petals (low chlorophyll content), and leaves (high chlorophyll content) of carnation (Dianthus caryophyllus L.). The expression of many genes encoding chlorophyll biosynthesis enzymes, in particular Mg-chelatase, was lower in non-green petals than in leaves. Non-green petals also showed higher expression of genes involved in chlorophyll degradation, including STAY-GREEN gene and pheophytinase. These data suggest that the absence of chlorophylls in carnation petals may be caused by the low rate of chlorophyll biosynthesis and high rate of degradation. Similar results were obtained by the analysis of Arabidopsis microarray data. In carnation, most genes related to chlorophyll biosynthesis were expressed at similar levels in pale-green petals and leaves, whereas the expression of chlorophyll catabolic genes was higher in pale-green petals than in leaves. Therefore, we hypothesize that the difference in chlorophyll content between non-green and pale-green petals is due to different levels of chlorophyll biosynthesis. Our study provides a basis for future molecular and genetic studies on organ-specific chlorophyll accumulation. PMID:25470367

Chlorophyll f and chlorophyll d are produced in the cyanobacterium Chlorogloeopsis fritschii when cultured under natural light and near-infrared radiation.

PubMed

Airs, R L; Temperton, B; Sambles, C; Farnham, G; Skill, S C; Llewellyn, C A

2014-10-16

We report production of chlorophyll f and chlorophyll d in the cyanobacterium Chlorogloeopsis fritschii cultured under near-infrared and natural light conditions. C. fritschii produced chlorophyll f and chlorophyll d when cultured under natural light to a high culture density in a 20 L bubble column photobioreactor. In the laboratory, the ratio of chlorophyll f to chlorophyll a changed from 1:15 under near-infrared, to an undetectable level of chlorophyll f under artificial white light. The results provide support that chlorophylls f and d are both red-light inducible chlorophylls in C. fritschii. Copyright © 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Three color laser fluorometer for studies of phytoplankton fluorescence

NASA Technical Reports Server (NTRS)

Phinney, David A.; Yentsch, C. S.; Rohrer, J.

1988-01-01

A three-color laser fluorometer has been developed for field work operations. Using two tunable dye lasers (excitation wavelengths at 440 nm and 530 nm), broadband wavelength optical filters were selected to obtain maximum fluorescence sensitivity at wavelengths greater than 675 nm (chlorophyll) and 575 + or - 15 nm (phycoerythrin). The laser fluorometer permits the measurement of phytoplankton pigments under static or flowing conditions and more closely resembles the time scales (ns) and energy levels (mW) of other laser-induced fluorescence instruments.

Selective enhancement of scopadulcic acid B production in the cultured tissues of Scoparia dulcis by methyl jasmonate.

PubMed

Nkembo, Kasidimoko Marguerite; Lee, Jung-Bum; Hayashi, Toshimitsu

2005-07-01

The effects of methyl jasmonate (MeJA) on isoprenoid production were evaluated in cultured tissues of Scoparia dulcis. It was found that MeJA suppressed the accumulation of chlorophylls, carotenoids, phytol and beta-sitosterol in the tissues. MeJA, however, remarkably enhanced the production of scopadulcic acid B (SDB), with 10 microM being optimal observed concentration for stimulation of SDB production. The maximum concentration of SDB was observed 6 d after MeJA treatment.

[Chlorophyll synthesis in cotyledons after gamma ray irradiation of black pine seeds].

PubMed

Bogdanović, M; Jelić, G

1992-01-01

The radiosensitivity of the greening system of Pinus nigra Arn. cotyledons has been studied in this paper. An exponential relation exists between the effect and dose for chlorophyll synthesis in the dark. Chlorophyll synthesis in the light roughly parallels that of chlorophyll synthesis in the dark. The restoration of chlorophyll was observed both in the light and in the dark. A stimulative effect of low doses of gamma radiation on chlorophyll synthesis was noticed. The radiosensitivity of chlorophyll a and chlorophyll b synthesis varied with the experimental conditions, suggesting that chlorophyll b synthesis might occur independently of chlorophyll a synthesis.

NASA Blue Marble 2007 East

NASA Image and Video Library

2010-03-12

RELEASE DATE: OCTOBER 9, 2007 Credit: NASA/Goddard Space Flight Center/Reto Stöckli A day’s clouds. The shape and texture of the land. The living ocean. City lights as a beacon of human presence across the globe. This amazingly beautiful view of Earth from space is a fusion of science and art, a showcase for the remote-sensing technology that makes such views possible, and a testament to the passion and creativity of the scientists who devote their careers to understanding how land, ocean, and atmosphere—even life itself—interact to generate Earth’s unique (as far as we know!) life-sustaining environment. Drawing on data from multiple satellite missions (not all collected at the same time), a team of NASA scientists and graphic artists created layers of global data for everything from the land surface, to polar sea ice, to the light reflected by the chlorophyll in the billions of microscopic plants that grow in the ocean. They wrapped these layers around a globe, set it against a black background, and simulated the hazy edge of the Earth’s atmosphere (the limb) that appears in astronaut photography of the Earth. The land surface layer is based on photo-like surface reflectance observations (reflected sunlight) measured by the Moderate Resolution Imaging Spectroradiometer (MODIS) on NASA’s Terra satellite in July 2004. The sea ice layer near the poles comes from Terra MODIS observations of daytime sea ice observed between August 28 and September 6, 2001. The ocean layer is a composite. In shallow water areas, the layer shows surface reflectances observed by Terra MODIS in July 2004. In the open ocean, the photo-like layer is overlaid with observations of the average ocean chlorophyll content for 2004. NASA’s Aqua MODIS collected the chlorophyll data. The cloud layer shows a single-day snapshot of clouds observed by Terra MODIS across the planet on July 29, 2001. City lights on Earth’s night side are visualized from data collected by the Defense Meteorological Satellite Program mission between 1994–1995. The topography layer is based on radar data collected by the Space Shuttle Endeavour during an 11-day mission in February of 2000. Topography over Antarctica comes from the Radarsat Antarctic Mapping Project, version 2. Most of the data layers in this visualization are available as monthly composites as part of NASA’s Blue Marble Next Generation image collection. The images in the collection appear in cylindrical projection (rectangular maps), and they are available at 500-meter resolution. The large images provided above are the full-size versions of these globes. In their hope that these images will inspire people to appreciate the beauty of our home planet and to learn about the Earth system, the developers of these images encourage readers to re-use and re-publish the images freely. NASA images by Reto Stöckli, based on data from NASA and NOAA. To learn the history of the Blue Marble go here: earthobservatory.nasa.gov/Features/BlueMarble/BlueMarble_... To learn more about the Blue Marble go here: earthobservatory.nasa.gov/IOTD/view.php?id=8108 To learn more about NASA's Goddard Space Flight Center go here: www.nasa.gov/centers/goddard/home/index.html NASA Goddard Space Flight Center is home to the nation's largest organization of combined scientists, engineers and technologists that build spacecraft, instruments and new technology to study the Earth, the sun, our solar system, and the universe. NASA Goddard Space Flight Center is home to the nation's largest organization of combined scientists, engineers and technologists that build spacecraft, instruments and new technology to study the Earth, the sun, our solar system, and the universe. Follow us on Twitter Join us on Facebook

Investigation of different coastal processes in Indonesian waters using SeaWiFS data

NASA Astrophysics Data System (ADS)

Hendiarti, Nani; Siegel, Herbert; Ohde, Thomas

2004-01-01

SeaWiFS data were applied to investigate coastal processes in Indonesian waters around the most populated island of Java. Coastal processes due to wind forcing were studied the first time using SeaWiFS-derived chlorophyll and TSM concentrations in combination with AVHRR-derived SST in the period from September 1997 to December 2001. Upwelling events were studied along the southern coast of Java during the southeast monsoon (June to September). Satellite-derived chlorophyll concentrations higher than 0.8 mg/ m3 and sea-surface temperatures lower than 28°C are indications of upwelling. Upwelling events influence the distribution and growth of phytoplankton and provide by that good feeding condition for zooplankton, larvae, juvenile and adult of pelagic fish. Coastal discharge into the western Java Sea contains organic and inorganic materials originating from different sources. Diffuse impacts, particularly from fish farms and aquaculture, as well as coastal erosion influence large coastal areas during the rainy season (December to March), and to a lesser extent during the dry season. Strong Citarum river discharge was observed during the transition phase from the rainy to the dry season (March and April), when the maximum amount of transported material reaches the sea. The river plume is evident from chlorophyll concentrations higher than 2.5 mg/ m3, and suspended particulate matter concentrations of more than 8 mg/dm3. The Sunda Strait is seasonally influenced by water transport from the Java Sea and from the Indian Ocean. The satellite data show that water transport from the Java Sea occurs during the pre-dominantly easterly winds period (June to September). This is characterized by warm water (SST higher than 29.5°C) and chlorophyll concentrations higher than 0.5 mg/ m3. This water transport influences the fish abundance in the Sunda Strait. High fish catches coincide with the presence of Java Sea water, while the surface currents lead to the migration of pelagic fish. Conversely, during the dominant westerly winds period, oceanic waters from the Indian Ocean with low chlorophyll concentrations influence the Sunda Strait water.

Leaf Chlorophyll Content as a Proxy for Photosynthetic Parameters for Estimating Carbon and Water Fluxes at a Forest Site

NASA Astrophysics Data System (ADS)

Luo, X.; Croft, H.; Chen, J.; Bartlett, P. A.; Staebler, R. M.; Froelich, N.

2016-12-01

Chlorophyll is the main light-harvesting pigment in leaves to support photosynthesis and also reflects the seasonal variations in the supply of nitrogen for photosynthetic enzymes. In this study, we explore the feasibility of using leaf chlorophyll content (Chlleaf) as a proxy for the leaf maximum carbonxylation rate at 25 °C ( ) for the purpose of improving carbon and water cycle estimation. Measurements of Chlleaf and were made in a decidous forest stand near Borden in Northern Ontario, Canada, which was equiped with eddy covariance instruments for measuring carbon and water fluxes. Based on the measurements from four broadleaf deciduous species, a linear relationship is develoepd between Chlleaf and . Compared to the prescribed constant values, derived from Chlleaf shows pronounced seasonal variations and improves the simulations of GPP and ET by 5% and 3%, respectively. The most significant improvements are found in spring and fall, when the errors in modelled GPP are reduced from 4.71 to 0.69 g/m2/day and from 2.4 to 1.16 g/m2/day, respecively. Errors in ET estimation are correspondingly reduced from 0.85 to 0.61 mm/day and from 0.40 to 0.33 mm/day in spring and autumn, respectively. A two-leaf upscaling scheme was used to account for the uneven distribution of incoming solar irradiance inside canopies and the accompanied physiological differences between leaves. One μg/cm2 of Chlleaf corresponds to 1.3 and 0.77 μmol/m2/s of in sunlit leaves and shaded leaves, respectively. The seasonal average rate of photosynthesis, transpiration, water use efficiency and light use efficiency of sunlit leaves are 2.7, 15, 0.19 and 0.3 times those of shaded leaves. For the first time, this sutdy incorporates chlorophyll in terrestrial biosphere models at a forest stand. Since it is feasible to derive leaf chlorophyll information using remote sensing means, this study would have profound implications on large-scale carbon and water fluxes estimation.

Phytoplankton biomass and microbial abundances during the spring upwelling season in the coastal area off Concepción, central-southern Chile: Variability around a time series station

NASA Astrophysics Data System (ADS)

Morales, Carmen E.; Anabalón, Valeria

2012-01-01

In the coastal system off Concepción, time series observations at a fixed station (St. 18) have shown strong seasonal changes in the oceanographic environment of the upper layer (<35 m depth), accompanied by large increases in phytoplankton biomass during the spring-summer upwelling season. These blooms, dominated by microplanktonic diatoms, have usually overshadowed the relevance of the smaller microbial components during upwelling. This study focuses on the variability of oceanographic conditions and their association with the structure of the planktonic community (size fractionated chlorophyll-a and microbial abundances) in the upper layer during the upwelling season, examining the extent to which St. 18 is representative of the coastal system off Concepción during springtime. For this purpose, data from three consecutive springs (2004, 2005, 2006) were compared, which included cruises for all years (8 stations around St. 18) as well as monthly sampling at St. 18. Most of the spatial (submesoscale) variability in chlorophyll-a and the microbial components was not significant, but data dispersion around mean values was high. Water column structure (temperature and salinity) in the upper layer explained a significant fraction (25-65%) of the spatial variability in most of the planktonic components; their responses to oceanographic variability were linear in some cases and non-linear in others. For the most part, St. 18 appears to adequately represent mean oceanographic conditions and the structure of planktonic communities in the coastal waters off Concepción during springtime, however spatial variability needs to be taken into account in the interpretations of temporal changes at this fixed station as well as in assessments of carbon flow within, and exportation processes from, this upwelling system.

Physical Mechanisms Routing Nutrients in the Central Red Sea

NASA Astrophysics Data System (ADS)

Zarokanellos, Nikolaos D.; Kürten, Benjamin; Churchill, James H.; Roder, Cornelia; Voolstra, Christian R.; Abualnaja, Yasser; Jones, Burton H.

2017-11-01

Mesoscale eddies and boundary currents play a key role in the upper layer circulation of the Red Sea. This study assesses the physical and biochemical characteristics of an eastern boundary current (EBC) and recurrent eddies in the central Red Sea (CRS) using a combination of in situ and satellite observations. Hydrographic surveys in November 2013 (autumn) and in April 2014 (spring) in the CRS (22.15°N-24.1°N) included a total of 39 and 27 CTD stations, respectively. In addition, high-resolution hydrographic data were acquired in spring 2014 with a towed undulating vehicle (ScanFish). In situ measurements of salinity, temperature, chlorophyll fluorescence, colored dissolved organic matter (CDOM), and dissolved nitrate: phosphorous ratios reveal distinct water mass characteristics for the two periods. An EBC, observed in the upper 150 m of the water column during autumn, transported low-salinity and warm water from the south toward the CRS. Patches of the low-salinity water of southern origin tended to contain relatively high concentrations of chlorophyll and CDOM. The prominent dynamic feature observed in spring was a cyclonic/anticyclonic eddy pair. The cyclonic eddy was responsible for an upward nutrient flux into the euphotic zone. Higher chlorophyll and CDOM concentrations, and concomitant lower nitrate:phosphorous ratios indicate the influence of the EBC in the CRS at the end of the stratified summer period.

Preparation of ultra-thin and high-quality WO{sub 3} compact layers and comparision of WO{sub 3} and TiO{sub 2} compact layer thickness in planar perovskite solar cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Jincheng; Shi, Chengwu, E-mail: shicw506@foxmail.com; Chen, Junjun

2016-06-15

In this paper, the ultra-thin and high-quality WO{sub 3} compact layers were successfully prepared by spin-coating-pyrolysis method using the tungsten isopropoxide solution in isopropanol. The influence of WO{sub 3} and TiO{sub 2} compact layer thickness on the photovoltaic performance of planar perovskite solar cells was systematically compared, and the interface charge transfer and recombination in planar perovskite solar cells with TiO{sub 2} compact layer was analyzed by electrochemical impedance spectroscopy. The results revealed that the optimum thickness of WO{sub 3} and TiO{sub 2} compact layer was 15 nm and 60 nm. The planar perovskite solar cell with 15 nm WO{submore » 3} compact layer gave a 9.69% average and 10.14% maximum photoelectric conversion efficiency, whereas the planar perovskite solar cell with 60 nm TiO{sub 2} compact layer achieved a 11.79% average and 12.64% maximum photoelectric conversion efficiency. - Graphical abstract: The planar perovskite solar cell with 15 nm WO{sub 3} compact layer gave a 9.69% average and 10.14% maximum photoelectric conversion efficiency, whereas the planar perovskite solar cell with 60 nm TiO{sub 2} compact layer achieved a 11.79% average and 12.64% maximum photoelectric conversion efficiency. Display Omitted - Highlights: • Preparation of ultra-thin and high-quality WO{sub 3} compact layers. • Perovskite solar cell with 15 nm-thick WO{sub 3} compact layer achieved PCE of 10.14%. • Perovskite solar cell with 60 nm-thick TiO{sub 2} compact layer achieved PCE of 12.64%.« less

Chlorophyll a is a favorable substrate for Chlamydomonas Mg-dechelatase encoded by STAY-GREEN.

PubMed

Matsuda, Kaori; Shimoda, Yousuke; Tanaka, Ayumi; Ito, Hisashi

2016-12-01

Mg removal from chlorophyll by Mg-dechelatase is the first step of chlorophyll degradation. Recent studies showed that in Arabidopsis, Stay Green (SGR) encodes Mg-dechelatase. Though the Escherichia coli expression system is advantageous for investigating the properties of Mg-dechelatase, Arabidopsis Mg-dechelatase is not successfully expressed in E. coli. Chlamydomonas reinhardtii SGR (CrSGR) has a long, hydrophilic tail, suggesting that active CrSGR can be expressed in E. coli. After the incubation of chlorophyll a with CrSGR expressed in E. coli, pheophytin a accumulated, indicating that active CrSGR was expressed in E. coli. Substrate specificity of CrSGR against chlorophyll b and an intermediate molecule of the chlorophyll b degradation pathway was examined. CrSGR exhibited no activity against chlorophyll b and low activity against 7-hydroxymethyl chlorophyll a, consistent with the fact that chlorophyll b is degraded only after conversion to chlorophyll a. CrSGR exhibited low activity against divinyl chlorophyll a and chlorophyll a', and no activity against chlorophyllide a, protochlorophyll a, chlorophyll c 2 , and Zn-chlorophyll a. These observations indicate that chlorophyll a is the most favorable substrate for CrSGR. When CrSGR was expressed in Arabidopsis cells, the chlorophyll content decreased, further confirming that SGR has Mg-dechelating activity in chloroplasts. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Seasonal and interannual variability in the taxonomic composition and production dynamics of phytoplankton assemblages in Crater Lake, Oregon

USGS Publications Warehouse

C. David, McIntire; Larson, Gary L.; Truitt, Robert E.

2007-01-01

Taxonomic composition and production dynamics of phytoplankton assemblages in Crater Lake, Oregon, were examined during time periods between 1984 and 2000. The objectives of the study were (1) to investigate spatial and temporal patterns in species composition, chlorophyll concentration, and primary productivity relative to seasonal patterns of water circulation; (2) to explore relationships between water column chemistry and the taxonomic composition of the phytoplankton; and (3) to determine effects of primary and secondary consumers on the phytoplankton assemblage. An analysis of 690 samples obtained on 50 sampling dates from 14 depths in the water column found a total of 163 phytoplankton taxa, 134 of which were identified to genus and 101 were identified to the species or variety level of classification. Dominant species by density or biovolume included Nitzschia gracilis, Stephanodiscus hantzschii, Ankistrodesmus spiralis, Mougeotia parvula, Dinobryon sertularia, Tribonema affine, Aphanocapsa delicatissima, Synechocystis sp., Gymnodinium inversum, and Peridinium inconspicuum. When the lake was thermally stratified in late summer, some of these species exhibited a stratified vertical distribution in the water column. A cluster analysis of these data also revealed a vertical stratification of the flora from the middle of the summer through the early fall. Multivariate test statistics indicated that there was a significant relationship between the species composition of the phytoplankton and a corresponding set of chemical variables measured for samples from the water column. In this case, concentrations of total phosphorus, ammonia, total Kjeldahl nitrogen, and alkalinity were associated with interannual changes in the flora; whereas pH and concentrations of dissolved oxygen, orthophosphate, nitrate, and silicon were more closely related to spatial variation and thermal stratification. The maximum chlorophyll concentration when the lake was thermally stratified in August and September was usually between depths of 100 m and 120 m. In comparison, the depth of maximum primary production ranged from 60 m to 80 m at this time of year. Regression analysis detected a weak negative relationship between chlorophyll concentration and Secchi disk depth, a measure of lake transparency. However, interannual changes in chlorophyll concentration and the species composition of the phytoplankton could not be explained by the removal of the septic field near Rim Village or by patterns of upwelling from the deep lake. An alternative trophic hypothesis proposes that the productivity of Crater Lake is controlled primarily by long-term patterns of climatic change that regulate the supply of allochthonous nutrients.

Upper Ocean Evolution Across the Beaufort Sea Marginal Ice Zone from Autonomous Gliders

NASA Astrophysics Data System (ADS)

Lee, Craig; Rainville, Luc; Perry, Mary Jane

2016-04-01

The observed reduction of Arctic summertime sea ice extent and expansion of the marginal ice zone (MIZ) have profound impacts on the balance of processes controlling sea ice evolution, including the introduction of several positive feedback mechanisms that may act to accelerate melting. Examples of such feedbacks include increased upper ocean warming though absorption of solar radiation, elevated internal wave energy and mixing that may entrain heat stored in subsurface watermasses (e.g., the relatively warm Pacific Summer (PSW) and Atlantic (AW) waters), and elevated surface wave energy that acts to deform and fracture sea ice. Spatial and temporal variability in ice properties and open water fraction impact these processes. To investigate how upper ocean structure varies with changing ice cover, and how the balance of processes shift as a function of ice fraction and distance from open water, four long-endurance autonomous Seagliders occupied sections that extended from open water, through the marginal ice zone, deep into the pack during summer 2014 in the Beaufort Sea. Sections reveal strong fronts where cold, ice-covered waters meet waters that have been exposed to solar warming, and O(10 km) scale eddies near the ice edge. In the pack, Pacific Summer Water and a deep chlorophyll maximum form distinct layers at roughly 60 m and 80 m, respectively, which become increasingly diffuse as they progress through the MIZ and into open water. The isopynal layer between 1023 and 1024 kgm-3, just above the PSW, consistently thickens near the ice edge, likely due to mixing or energetic vertical exchange associated with strong lateral gradients in this region. This presentation will discuss the upper ocean variability, its relationship to sea ice extent, and evolution over the summer to the start of freeze up.

Upper Ocean Evolution Across the Beaufort Sea Marginal Ice Zone from Autonomous Gliders

NASA Astrophysics Data System (ADS)

Lee, C.; Rainville, L.; Perry, M. J.

2016-02-01

The observed reduction of Arctic summertime sea ice extent and expansion of the marginal ice zone (MIZ) have profound impacts on the balance of processes controlling sea ice evolution, including the introduction of several positive feedback mechanisms that may act to accelerate melting. Examples of such feedbacks include increased upper ocean warming though absorption of solar radiation, elevated internal wave energy and mixing that may entrain heat stored in subsurface watermasses (e.g., the relatively warm Pacific Summer (PSW) and Atlantic (AW) waters), and elevated surface wave energy that acts to deform and fracture sea ice. Spatial and temporal variability in ice properties and open water fraction impact these processes. To investigate how upper ocean structure varies with changing ice cover, and how the balance of processes shift as a function of ice fraction and distance from open water, four long-endurance autonomous Seagliders occupied sections that extended from open water, through the marginal ice zone, deep into the pack during summer 2014 in the Beaufort Sea. Sections reveal strong fronts where cold, ice-covered waters meet waters that have been exposed to solar warming, and O(10 km) scale eddies near the ice edge. In the pack, Pacific Summer Water and a deep chlorophyll maximum form distinct layers at roughly 60 m and 80 m, respectively, which become increasingly diffuse as they progress through the MIZ and into open water. The isopynal layer between 1023 and 1024 kg m-3, just above the PSW, consistently thickens near the ice edge, likely due to mixing or energetic vertical exchange associated with strong lateral gradients in this region. This presentation will discuss the upper ocean variability, its relationship to sea ice extent, and evolution over the summer to the start of freeze up.

Incorporation of Solar-Induced Chlorophyll Fluorescence into the Breathing Earth System Simulator (BESS)

NASA Astrophysics Data System (ADS)

Dechant, B.; Ryu, Y.; Jiang, C.; Yang, K.

2017-12-01

Solar-induced chlorophyll fluorescence (SIF) is rapidly becoming an important tool to remotely estimate terrestrial gross primary productivity (GPP) at large spatial scales. Many findings, however, are based on empirical relationships between SIF and GPP that have been found to be dependent on plant functional types. Therefore, combining model-based analysis with observations is crucial to improve our understanding of SIF-GPP relationships. So far, most model-based results were based on SCOPE, a complex ecophysiological model with explicit description of canopy layers and a large number of parameters that may not be easily obtained reliably on large scales. Here, we report on our efforts to incorporate SIF into a two-big leaf (sun and shade) process-based model that is suitable for obtaining its inputs entirely from satellite products. We examine if the SIF-GPP relationships are consistent with the findings from SCOPE simulations and investigate if incorporation of the SIF signal into BESS can help improve GPP estimation. A case study in a rice paddy is presented.

Evaluation of phytoplankton community composition in the eutrophic Masan Bay by HPLC pigment analysis.

PubMed

Kim, Jeong Bae; Hong, Sokjin; Lee, Won-Chan; Lee, Yong-Woo; Kim, Hyung Chul; Cho, Yoonsik

2015-03-01

To assess the spatiotemporal changes in phytoplankton community composition in relation to the environment of Masan Bay, a semi-enclosed bay on the southern coast of Korea, photosynthetic pigments and environmental variables were analyzed in seawater, every month between March and November 2010. The level of dissolved inorganic nutrients was highest between July and September when the freshwater influx was at its peak, whereas chlorophyll a level was highest in April and August. Phosphate concentration was low in April (average: 0.22 +/- 0.17 microM), indicating the role of phosphate as a growth-limiting factor for phytoplankton. The results of pigment analysis indicate that dinoflagellate blooms occurred under favorable conditions, where competition with diatoms occurred. Fucoxanthin- and chlorophyll b-containing phytoplankton dominated the surface layer of Masan Bay from July to September. The composition of phytoplankton community in Masan Bay changed dramatically each month according to variations in the amount and composition of nutrients introduced through surface runoff.

Influence of solar radiation absorbed by phytoplankton on the thermal structure and circulation of the tropical Atlantic Ocean

NASA Astrophysics Data System (ADS)

Frouin, Robert; Ueyoshi, Kyozo; Kampel, Milton

2007-09-01

Numerical experiments conducted with an ocean general ocean circulation model reveal the potential influence of solar radiation absorbed by phytoplankton on the thermal structure and currents of the Tropical Atlantic Ocean. In the model, solar radiation penetration is parameterized explicitly as a function of chlorophyll-a concentration, the major variable affecting water turbidity in the open ocean. Two types of runs are performed, a clear water (control) run with a constant minimum chlorophyll-a concentration of 0.02 mgm -3, and a turbid water (chlorophyll) run with space- and time-varying chlorophyll-a concentration from satellite data. The difference between results from the two runs yields the biological effects. In the chlorophyll run, nutrients and biology production are implicitly taken into account, even though biogeochemical processes are not explicitly included, since phytoplankton distribution, prescribed from observations, is the result of those processes. Due to phytoplankton-radiation forcing, the surface temperature is higher by 1-2 K on average annually in the region of the North Equatorial current, the Northern part of the South Equatorial current, and the Caribbean system, and by 3-4 K in the region of the Guinea current. In this region, upwelling is reduced, and heat trapped in the surface layers by phytoplankton is not easily removed. The surface temperature is lower by 1 K in the Northern region of the Benguela current, due to increased upwelling. At depth, the equatorial Atlantic is generally cooler, as well as the eastern part of the tropical basin (excluding the region of the sub-tropical gyres). The North and South equatorial currents, as well as the Equatorial undercurrent, are enhanced by as much as 3-4 cms -1, and the circulation of the subtropical gyres is increased. Pole-ward heat transport is slightly reduced North of 35°N, suggesting that phytoplankton, by increasing the horizontal return flow in the subtropical region, may exert a cooling influence on higher latitude regions. The findings indicate that biology-induced buoyancy plays a significant role, in an indirect if not direct way, in the variability of the Tropical Atlantic Ocean, with consequences on atmospheric circulation and climate.

Climate-driven basin-scale decadal oscillations of oceanic phytoplankton.

PubMed

Martinez, Elodie; Antoine, David; D'Ortenzio, Fabrizio; Gentili, Bernard

2009-11-27

Phytoplankton--the microalgae that populate the upper lit layers of the ocean--fuel the oceanic food web and affect oceanic and atmospheric carbon dioxide levels through photosynthetic carbon fixation. Here, we show that multidecadal changes in global phytoplankton abundances are related to basin-scale oscillations of the physical ocean, specifically the Pacific Decadal Oscillation and the Atlantic Multidecadal Oscillation. This relationship is revealed in approximately 20 years of satellite observations of chlorophyll and sea surface temperature. Interaction between the main pycnocline and the upper ocean seasonal mixed layer is one mechanism behind this correlation. Our findings provide a context for the interpretation of contemporary changes in global phytoplankton and should improve predictions of their future evolution with climate change.

Mid-depth temperature maximum in an estuarine lake

NASA Astrophysics Data System (ADS)

Stepanenko, V. M.; Repina, I. A.; Artamonov, A. Yu; Gorin, S. L.; Lykossov, V. N.; Kulyamin, D. V.

2018-03-01

The mid-depth temperature maximum (TeM) was measured in an estuarine Bol’shoi Vilyui Lake (Kamchatka peninsula, Russia) in summer 2015. We applied 1D k-ɛ model LAKE to the case, and found it successfully simulating the phenomenon. We argue that the main prerequisite for mid-depth TeM development is a salinity increase below the freshwater mixed layer, sharp enough in order to increase the temperature with depth not to cause convective mixing and double diffusion there. Given that this condition is satisfied, the TeM magnitude is controlled by physical factors which we identified as: radiation absorption below the mixed layer, mixed-layer temperature dynamics, vertical heat conduction and water-sediments heat exchange. In addition to these, we formulate the mechanism of temperature maximum ‘pumping’, resulting from the phase shift between diurnal cycles of mixed-layer depth and temperature maximum magnitude. Based on the LAKE model results we quantify the contribution of the above listed mechanisms and find their individual significance highly sensitive to water turbidity. Relying on physical mechanisms identified we define environmental conditions favouring the summertime TeM development in salinity-stratified lakes as: small-mixed layer depth (roughly, ~< 2 m), transparent water, daytime maximum of wind and cloudless weather. We exemplify the effect of mixed-layer depth on TeM by a set of selected lakes.

Air-Sea and Lateral Exchange Processes in East Indian Coastal Current off Sri Lanka

DTIC Science & Technology

2015-09-30

moorings to shed light on the spatial structure of the upper layer currents in the area associated with southwest monsoons. C. CTD and ADCP...thermohaline profiles (Fig. 4a). Figure 3. The weekly composite (June 30 – July 3) image of the BoB ocean color, showing enhanced chlorophyll ...measurements. The depth- averaged (between z = 21 and 141m) velocity magnitude is shown by black line; a polynomial approximation of these fluctuations is in

Relationship between chlorophyll density and SPAD chlorophyll meter reading for Jerusalem artichoke (Helianthus tuberosus L.)

USDA-ARS?s Scientific Manuscript database

Chlorophyll is an indicator of crop health and productivity. Measuring chlorophyll is usually done directly and requires significant time and resources. Indirect measurement of chlorophyll density using a handheld portable chlorophyll meter can reduce time. However, this information is very limit...

Inherent limitations of nondestructive chlorophyll meters: a comparison of two types of meters

NASA Technical Reports Server (NTRS)

Monje, O. A.; Bugbee, B.

1992-01-01

Two types of nondestructive chlorophyll meters were compared with a standard, destructive chlorophyll measurement technique. The nondestructive chlorophyll meters were 1) a custom built, single-wavelength meter, and 2) the recently introduced, dual-wavelengh, chlorophyll meter from Minolta (model SPAD-502). Data from both meters were closely correlated with destructive measurements of chlorophyll (r2 = 0.90 and 0.93; respectively) for leaves with chlorophyll concentrations ranging from 100 to 600 mg m-2, but both meters consistently overestimated chlorophyll outside this range. Although the dual-wavelength meter was slightly more accurate than the single-wavelength meter (higher r2), the light-scattering properties of leaf cells and the nonhomogeneous distribution of chlorophyll in leaves appear to limit the ability of all meters to estimate in vivo chlorophyll concentration.

One year of Seaglider dissolved oxygen concentration profiles at the PAP site

NASA Astrophysics Data System (ADS)

Binetti, Umberto; Kaiser, Jan; Heywood, Karen; Damerell, Gillian; Rumyantseva, Anna

2015-04-01

Oxygen is one of the most important variables measured in oceanography, influenced both by physical and biological factors. During the OSMOSIS project, 7 Seagliders were used in 3 subsequent missions to measure a multidisciplinary suite of parameters at high frequency in the top 1000 m of the water column for one year, from September 2012 to September 2013. The gliders were deployed at the PAP time series station (nominally at 49° N 16.5° W) and surveyed the area following a butterfly-shaped path. Oxygen concentration was measured by Aanderaa optodes and calibrated using ship CTD O2 profiles during 5 deployment and recovery cruises, which were in turn calibrated by Winkler titration of discrete samples. The oxygen-rich mixed layer deepens in fall and winter and gets richer in oxygen when the temperature decreases. The spring bloom did not happen as expected, but instead the presence of a series of small blooms was measured throughout spring and early summer. During the summer the mixed layer become very shallow and oxygen concentrations decreased. A Deep Oxygen Maximum (DOM) developed along with a deep chlorophyll maximum during the summer and was located just below the mixed layer . At this depth, phytoplankton had favourable light and nutrient conditions to grow and produce oxygen, which was not subject to immediate outgassing. The oxygen concentration in the DOM was not constant, but decreased, then increased again until the end of the mission. Intrusions of oxygen rich water are also visible throughout the mission. These are probably due to mesoscale events through the horizontal transport of oxygen and/or nutrients that can enhance productivity, particularly at the edge of the fronts. We calculate net community production (NCP) by analysing the variation in oxygen with time. Two methods have been proposed. The classical oxygen budget method assumes that changes in oxygen are due to the sum of air-sea flux, isopycnal advection, diapycnal mixing and NCP. ERA-Interim provides climatological data to calculate air-sea gas exchange fluxes based on wind-speed parameterisations of the gas exchange coefficient. The second method exploits the high frequency of the measurements to determine the increment of oxygen over time during daylight hours to measure NCP. Together with the O2 concentration decrease during the night (due to community respiration), this method also allows us to derive gross oxygen production rates. The results of these two methods are compared.

Characterization of chlorophyll binding to LIL3.

PubMed

Mork-Jansson, Astrid Elisabeth; Eichacker, Lutz Andreas

2018-01-01

The light harvesting like protein 3 (LIL 3) from higher plants, has been linked to functions in chlorophyll and tocopherol biosynthesis, photo-protection and chlorophyll transfer. However, the binding of chlorophyll to LIL3 is unclear. We present a reconstitution protocol for chlorophyll binding to LIL3 in DDM micelles. It is shown in the absence of lipids and carotenoids that reconstitution of chlorophyll binding to in vitro expressed LIL3 requires pre-incubation of reaction partners at room temperature. We show chlorophyll a but not chlorophyll b binding to LIL3 at a molar ratio of 1:1. Neither dynamic light scattering nor native PAGE, enabled a discrimination between binding of chlorophyll a and/or b to LIL3.

A white organic light emitting diode based on anthracene-triphenylamine derivatives

NASA Astrophysics Data System (ADS)

Jiang, Quan; Qu, Jianjun; Yu, Junsheng; Tao, Silu; Gan, Yuanyuan; Jiang, Yadong

2010-10-01

White organic lighting-diode (WOLED) can be used as flat light sources, backlights for liquid crystal displays and full color displays. Recently, a research mainstream of white OLED is to develop the novel materials and optimize the structure of devices. In this work a WOLED with a structure of ITO/NPB/PAA/Alq3: x% rubrene/Alq3/Mg: Ag, was fabricated. The device has two light-emitting layers. NPB is used as a hole transport layer, PAA as a blue emitting layer, Alq3: rubrene host-guest system as a yellow emitting layer, and Alq3 close to the cathode as an electron transport layer. In the experiment, the doping concentration of rubrene was optimized. WOLED 1 with 4% rubrene achieved a maximum luminous efficiency of 1.80 lm/W, a maximum luminance of 3926 cd/m2 and CIE coordinates of (0.374, 0.341) .WOLED 2 with 2% rubrene achieved a maximum luminous efficiency of 0.65 lm/W, a maximum luminance of 7495cd/m2 and CIE coordinates of (0.365,0.365).

Characterization of chlorophyll binding to LIL3

PubMed Central

Mork-Jansson, Astrid Elisabeth

2018-01-01

The light harvesting like protein 3 (LIL 3) from higher plants, has been linked to functions in chlorophyll and tocopherol biosynthesis, photo-protection and chlorophyll transfer. However, the binding of chlorophyll to LIL3 is unclear. We present a reconstitution protocol for chlorophyll binding to LIL3 in DDM micelles. It is shown in the absence of lipids and carotenoids that reconstitution of chlorophyll binding to in vitro expressed LIL3 requires pre-incubation of reaction partners at room temperature. We show chlorophyll a but not chlorophyll b binding to LIL3 at a molar ratio of 1:1. Neither dynamic light scattering nor native PAGE, enabled a discrimination between binding of chlorophyll a and/or b to LIL3. PMID:29390011

Allocation of secondary metabolites, photosynthetic capacity, and antioxidant activity of Kacip Fatimah (Labisia pumila Benth) in response to CO2 and light intensity.

PubMed

Ibrahim, Mohd Hafiz; Jaafar, Hawa Z E; Karimi, Ehsan; Ghasemzadeh, Ali

2014-01-01

A split plot 3 by 4 experiment was designed to investigate and distinguish the relationships among production of secondary metabolites, soluble sugar, phenylalanine ammonia lyase (PAL; EC 4.3.1.5) activity, leaf gas exchange, chlorophyll content, antioxidant activity (DPPH), and lipid peroxidation under three levels of CO2 (400, 800, and 1200 μ mol/mol) and four levels of light intensity (225, 500, 625, and 900 μ mol/m(2)/s) over 15 weeks in Labisia pumila. The production of plant secondary metabolites, sugar, chlorophyll content, antioxidant activity, and malondialdehyde content was influenced by the interactions between CO2 and irradiance. The highest accumulation of secondary metabolites, sugar, maliondialdehyde, and DPPH activity was observed under CO2 at 1200 μ mol/mol + light intensity at 225 μ mol/m(2)/s. Meanwhile, at 400 μ mol/mol CO2 + 900 μ mol/m(2)/s light intensity the production of chlorophyll and maliondialdehyde content was the highest. As CO2 levels increased from 400 to 1200 μ mol/mol the photosynthesis, stomatal conductance, f v /f m (maximum efficiency of photosystem II), and PAL activity were enhanced. The production of secondary metabolites displayed a significant negative relationship with maliondialdehyde indicating lowered oxidative stress under high CO2 and low irradiance improved the production of plant secondary metabolites that simultaneously enhanced the antioxidant activity (DPPH), thus improving the medicinal value of Labisia pumila under this condition.

PsbS is required for systemic acquired acclimation and post-excess-light-stress optimization of chlorophyll fluorescence decay times in Arabidopsis

PubMed Central

Ciszak, Kamil; Kulasek, Milena; Barczak, Anna; Grzelak, Justyna; Maćkowski, Sebastian; Karpiński, Stanisław

2015-01-01

Systemic acquired acclimation (SAA) is an important light acclimatory mechanism that depends on the global adjustments of non-photochemical quenching and chloroplast retrograde signaling. As the exact regulation of these processes is not known, we measured time-resolved fluorescence of chlorophyll a in Arabidopsis thaliana leaves exposed to excess light, in leaves undergoing SAA, and in leaves after excess light episode. We compare the behavior induced in wild-type plants with null mutant of non-photochemical quenching (npq4–1). The wild type rosettes exhibit a small reduction of fluorescence decay times in leaves directly exposed to excess light and in leaves undergoing SAA in ambient low light. However in npq4–1 exposition to excess light results in much faster fluorescence decay, which is insensitive to excitation power. At the same time npq4–1 leaves undergoing SAA displayed intermediate fluorescence decay. The npq4–1 plants also lost the ability to optimize florescence decay, and thus chlorophyll a dynamics up to 2 h after excess light episode. The fluorescence decay dynamics in both WT and npq4–1 can be described by a set of 3 maximum decay times. Based on the results, we concluded that functional PsbS is required for optimization of absorbed photon fate and optimal light acclimatory responses such as SAA or after excess light stress. PMID:25654166

Contrasts between channels and backwaters in a large, floodplain river: Testing our understanding of nutrient cycling, phytoplankton abundance, and suspended solids dynamics

USGS Publications Warehouse

Houser, Jeff N.

2016-01-01

In floodplain rivers, variability in hydraulic connectivity interacts with biogeochemistry to determine the distribution of suspended and dissolved substances. Nutrient, chlorophyll a, and suspended solids data spanning longitudinal (5 study reaches across 1300 river km), lateral (main channel and backwaters), and temporal (1994–2011) gradients in the Upper Mississippi River (UMR) were used to examine the extent to which observed differences between the main channel and backwaters were consistent with expectations based on current understanding of biogeochemical processes in large rivers. For N and P, the results largely conformed to expectations. N concentrations were greater in the main channel than in the backwaters in 82 to 96% of the observations across river reaches. Maximum TP concentrations generally occurred in backwaters during summer, when backwater TP often exceeded that of the main channel. Flux of P from sediments may be a substantial source of water-column P in UMR backwaters in summer. The data for suspended solids and chlorophyll a suggest that some refinements are needed of our understanding of ecosystem processes in large rivers. During low-discharge conditions, concentrations of inorganic suspended solids often were greater in backwaters than in the main channel, suggesting the importance of sediment resuspension. Chlorophyll a concentrations were usually greater in backwaters than in the main channel, but exceptions indicate that phytoplankton abundance in the main channel of the UMR can sometimes be greater than is typically expected for large rivers.

The Growth Response of Two Diatom Species to Atmospheric Dust from the Last Glacial Maximum.

PubMed

Conway, Tim M; Hoffmann, Linn J; Breitbarth, Eike; Strzepek, Robert F; Wolff, Eric W

2016-01-01

Relief of iron (Fe) limitation in the surface Southern Ocean has been suggested as one driver of the regular glacial-interglacial cycles in atmospheric carbon dioxide (CO2). The proposed cause is enhanced deposition of Fe-bearing atmospheric dust to the oceans during glacial intervals, with consequent effects on export production and the carbon cycle. However, understanding the role of enhanced atmospheric Fe supply in biogeochemical cycles is limited by knowledge of the fluxes and 'bioavailability' of atmospheric Fe during glacial intervals. Here, we assess the effect of Fe fertilization by dust, dry-extracted from the Last Glacial Maximum portion of the EPICA Dome C Antarctic ice core, on the Antarctic diatom species Eucampia antarctica and Proboscia inermis. Both species showed strong but differing reactions to dust addition. E. antarctica increased cell number (3880 vs. 786 cells mL-1), chlorophyll a (51 vs. 3.9 μg mL-1) and particulate organic carbon (POC; 1.68 vs. 0.28 μg mL-1) production in response to dust compared to controls. P. inermis did not increase cell number in response to dust, but chlorophyll a and POC per cell both strongly increased compared to controls (39 vs. 15 and 2.13 vs. 0.95 ng cell-1 respectively). The net result of both responses was a greater production of POC and chlorophyll a, as well as decreased Si:C and Si:N incorporation ratios within cells. However, E, antarctica decreased silicate uptake for the same nitrate and carbon uptake, while P. inermis increased carbon and nitrate uptake for the same silicate uptake. This suggests that nutrient utilization changes in response to Fe addition could be driven by different underlying mechanisms between different diatom species. Enhanced supply of atmospheric dust to the surface ocean during glacial intervals could therefore have driven nutrient-utilization changes which could permit greater carbon fixation for lower silica utilization. Additionally, both species responded more strongly to lower amounts of direct Fe chloride addition than they did to dust, suggesting that not all the Fe released from dust was in a bioavailable form available for uptake by diatoms.

The Growth Response of Two Diatom Species to Atmospheric Dust from the Last Glacial Maximum

PubMed Central

Hoffmann, Linn J.; Breitbarth, Eike; Strzepek, Robert F.; Wolff, Eric W.

2016-01-01

Relief of iron (Fe) limitation in the surface Southern Ocean has been suggested as one driver of the regular glacial-interglacial cycles in atmospheric carbon dioxide (CO2). The proposed cause is enhanced deposition of Fe-bearing atmospheric dust to the oceans during glacial intervals, with consequent effects on export production and the carbon cycle. However, understanding the role of enhanced atmospheric Fe supply in biogeochemical cycles is limited by knowledge of the fluxes and ‘bioavailability’ of atmospheric Fe during glacial intervals. Here, we assess the effect of Fe fertilization by dust, dry-extracted from the Last Glacial Maximum portion of the EPICA Dome C Antarctic ice core, on the Antarctic diatom species Eucampia antarctica and Proboscia inermis. Both species showed strong but differing reactions to dust addition. E. antarctica increased cell number (3880 vs. 786 cells mL-1), chlorophyll a (51 vs. 3.9 μg mL-1) and particulate organic carbon (POC; 1.68 vs. 0.28 μg mL-1) production in response to dust compared to controls. P. inermis did not increase cell number in response to dust, but chlorophyll a and POC per cell both strongly increased compared to controls (39 vs. 15 and 2.13 vs. 0.95 ng cell-1 respectively). The net result of both responses was a greater production of POC and chlorophyll a, as well as decreased Si:C and Si:N incorporation ratios within cells. However, E, antarctica decreased silicate uptake for the same nitrate and carbon uptake, while P. inermis increased carbon and nitrate uptake for the same silicate uptake. This suggests that nutrient utilization changes in response to Fe addition could be driven by different underlying mechanisms between different diatom species. Enhanced supply of atmospheric dust to the surface ocean during glacial intervals could therefore have driven nutrient-utilization changes which could permit greater carbon fixation for lower silica utilization. Additionally, both species responded more strongly to lower amounts of direct Fe chloride addition than they did to dust, suggesting that not all the Fe released from dust was in a bioavailable form available for uptake by diatoms. PMID:27384948

Predicting the spatiotemporal distributions of marine fish species utilizing earth system data in a maximum entropy modeling framework

NASA Astrophysics Data System (ADS)

Wang, L.; Kerr, L. A.; Bridger, E.

2016-12-01

Changes in species distributions have been widely associated with climate change. Understanding how ocean conditions influence marine fish distributions is critical for elucidating the role of climate in ecosystem change and forecasting how fish may be distributed in the future. Species distribution models (SDMs) can enable estimation of the likelihood of encountering species in space or time as a function of environmental conditions. Traditional SDMs are applied to scientific-survey data that include both presences and absences. Maximum entropy (MaxEnt) models are promising tools as they can be applied to presence-only data, such as those collected from fisheries or citizen science programs. We used MaxEnt to relate the occurrence records of marine fish species (e.g. Atlantic herring, Atlantic mackerel, and butterfish) from NOAA Northeast Fisheries Observer Program to environmental conditions. Environmental variables from earth system data, such as sea surface temperature (SST), sea bottom temperature (SBT), Chlorophyll-a, bathymetry, North Atlantic oscillation (NAO), and Atlantic multidecadal oscillation (AMO), were matched with species occurrence for MaxEnt modeling the fish distributions in Northeast Shelf area. We developed habitat suitability maps for these species, and assessed the relative influence of environmental factors on their distributions. Overall, SST and Chlorophyll-a had greatest influence on their monthly distributions, with bathymetry and SBT having moderate influence and climate indices (NAO and AMO) having little influence. Across months, Atlantic herring distribution was most related to SST 10th percentile, and Atlantic mackerel and butterfish distributions were most related to previous month SST. The fish distributions were most affected by previous month Chlorophyll-a in summer months, which may indirectly indicate the accumulative impact of primary productivity. Results highlighted the importance of spatial and temporal scales when using SDMs to investigate the habitat suitability and distributions of a focal species. MaxEnt models have the potential to provide hindcasts of where species might have been in the past in relation to historical environmental conditions, nowcasts in relation to current conditions, or forecasts of future species distributions.

Tunable electronic structure and spin splitting in single and multiple Fe-adsorbed g-C2N with different layers: A first-principles study

NASA Astrophysics Data System (ADS)

Zheng, Z. D.; Wang, X. C.; Mi, W. B.

2018-04-01

The electronic structure of Fe adsorbed g-C2N with different layers is investigated by first-principles calculations. The Fe1 and Fe2 represent the Fe adsorptions at Csbnd C and Csbnd N rings, and Fe11 and Fe121 adsorption sites are also considered. The Fe1 adsorbed g-C2N is metallic with layer from n = 1 to 4, and the maximum spin splitting is 515, 428, 46 and 133 meV. The band gap of Fe2 adsorbed g-C2N with different layers is 0, 0, 117 and 6 meV, and the maximum spin splitting is 565, 369, 195 and 146 meV, respectively. All of the Fe11 adsorbed g-C2N are metallic with layer from n = 1 to 4, and the maximum spin splitting is 199, 0, 83 and 203 meV. An indirect band gap of 215 meV appears in Fe121 adsorbed g-C2N at layer n = 3, and the maximum spin splitting is 283, 211, 304 and 153 meV, respectively. Our results show that the electronic structures of Fe adsorbed novel two-dimensional semiconductor g-C2N can be tuned by different layers. Moreover, the spin splitting of Fe2 adsorbed g-C2N decreases monotonically as g-C2N layer increases from n = 1 to 4, which will provide more potential applications in spintronic devices.

Effect of light quality on the C-phycoerythrin production in marine cyanobacteria Pseudanabaena sp. isolated from Gujarat coast, India.

PubMed

Mishra, Sanjiv K; Shrivastav, Anupama; Maurya, Rahulkumar R; Patidar, Shailesh K; Haldar, Soumya; Mishra, Sandhya

2012-01-01

The isolated cyanobacterium containing biopigments like chlorophyll-a, phycoerythrin, phycocyanin, and carotenoid was cultured under different quality of light modes to ascertain biomass and pigment productivity. On the basis of 16S rRNA gene sequence, the isolate was identified as Pseudanabaena sp. Maximum biomass concentration obtained in white-, blue-, and green-light was 0.82, 0.94, and 0.89 g/L, respectively. It was observed that maximum phycoerythrin production was in green light (39.2 mg/L), ensued by blue light (32.2 mg/L), while phycocyanin production was maximum in red light (10.9 mg/L). In yellow light, pigment production as well as the growth rate gradually declined after 12 days. Carotenoid production decreased in blue-, white-, and red-light after 15 days, while in green light it had increased gradually. The present communication suggests that Pseudanabaena sp. can be used for commercial production of phycoerythrin when grown under green light. Copyright © 2011 Elsevier Inc. All rights reserved.

Algal culture studies related to a closed ecological life support system

NASA Technical Reports Server (NTRS)

Radmer, R.; Behrens, P.; Fernandez, E.; Ollinger, O.; Howell, C.

1984-01-01

Studies on the steady-state long-term (4 month) culture of Scenedesmus obliquus algae, maintained in an annular air-lift column operated as a turbidostat, were carried out to evaluate the life-supporting possibilities of this system. Chlorophyll production and cell number as functions of the dry weight were linear at constant illumination. Productivity (measured as the product of dry weight, mg/ml, and the growth rate, ml/hr) vs. dry weight rose linearly until the cell density reached a level at which light became limiting (89 percent absorption of the photosynthetically active radiation). In the initial, linear portion of the curve, the productivity was limited by cell growth at the given light intensity. The maximum dilution rate of the system corresponded to the doubling time of 13.4 hr, about half the maximum rate, with a productivity of 80 percent of the maximum theoretical productivity. The high light utilization efficiencies were contributed by the low (10 percent of full sunlight) incident intensities.

Phytoplankton and nutrient dynamics of six South West Indian Ocean seamounts

NASA Astrophysics Data System (ADS)

Sonnekus, Martinus J.; Bornman, Thomas G.; Campbell, Eileen E.

2017-02-01

A survey of six seamounts and two transects through the subtropical convergence zone (SCZ) in the South Indian Ocean in November and December 2009 showed a strong latitudinal gradient from the subtropics to the Sub-Antarctic Front. Concentrations of oxygen, nitrate, nitrite, soluble reactive phosphorous as well as phytoplankton biomass (measured as chlorophyll a) increased while salinity and temperature decreased with an increase in latitude. These differences resulted in significant differences between seamounts. The chlorophyll a maximum became shallower at higher latitudes, changing from a depth of 85 m in the subtropics to 35 m over the seamounts and in the SCZ. The mixed layer depth also increased from 50 m in the subtropics to 100 m at higher latitude stations. The N:P and N:Si ratio indicated that NO3- was limiting at all the seamounts except one, at which SiO4 was the limiting nutrient. The phytoplankton community also showed a latitudinal gradient with decreasing diversity and a change in dominance from dinoflagellates in the tropics to diatoms towards the SCZ. The dominant diatom genus of the survey (>50% of the cell counts) was Pseudo-nitzschia. Nutrients exhibited an inverse linear relationship with temperature and salinity. The oligotrophic subtropical areas differed from the mesotrophic seamounts in temperature while waters over seamounts north and south of the Agulhas Return Current (ARC) differed in salinity. The phytoplankton (148 taxa) responded to these differences, showing three communities: subtropical seamount phytoplankton (Atlantis Seamount, Walters Seamount and off-mount samples), phytoplankton of the waters north of the ARC (Melville Bank, Sapmer Bank, Middle of What Seamount) and phytoplankton south of the ARC (Coral Seamount, SCZ1) characterised by a bloom of Phaeocystis antarctica. The environmental drivers most strongly linked to these observed differences were nitrate, temperature and oxygen. These environmental drivers displayed a clear latitudinal gradient unaffected by mesoscale variability of the ARC eddy field and allowing the three phytoplankton communities to persist. Phytoplankton biomass was enhanced in the shallow (< 200 m) seamount waters, although the speed of the currents indicates an allochthonous origin.

Does Terrestrial Carbon Explain Lake Superior Model-Data pCO2 Discrepancy?

NASA Astrophysics Data System (ADS)

Bennington, V.; McKinley, G. A.; Atilla, N.; Kimura, N.; Urban, N.; Wu, C.; Desai, A.

2008-12-01

As part of the CyCLeS project, a three-dimensional hydrodynamic model (MITgcm) was coupled to a medium- complexity ecosystem model and applied to Lake Superior in order to constrain the seasonal cycle of lake pCO2 and air-lake fluxes of CO2. Previous estimates of CO2 emissions from the lake, while very large, were based on field measurements of very limited spatial and temporal extent. The model allows a more realistic extrapolation from the limited data by incorporation of lake-wide circulation and food web dynamics. A large discrepancy (200 uatm) between observations and model-predicted pCO2 during spring suggests a significant input of terrestrial carbon into the lake. The physical model has 10-km horizontal resolution with 29 vertical layers, ten of which are in the top 50 m of the water column. The model is forced by interpolated meteorological data obtained from land-based weather stations, buoys, and other measurements. Modeled surface temperatures compare well to satellite- based surface water temperature images derived from NOAA AVHRR (Advanced Very High Resolution Radiometer), though there are regional patterns of bias that suggest errors in the heat flux forcing. Growth of two classes of phytoplankton is modeled as a function of temperature, light, and nutrients. One grazer preys upon all phytoplankton. The cycles of carbon and phosphorous are explicitly modeled throughout the water column. The model is able to replicate the observed seasonal cycle of lake chlorophyll and the deep chlorophyll maximum. The model is unable to capture the magnitude of observed CO2 super-saturation during spring without considering external carbon inputs to the lake. Simple box model results suggest that the estimated pool of terrestrial carbon in the lake (17 TgC) must remineralize with a timescale of months during spring in order to account for the model/data pCO2 difference. River inputs and enhanced remineralization in spring due to photo-oxidation are other mechanisms considered to explain the discrepancy between model predictions and observations of pCO2. Model results suggest that year-round and lake-wide direct measurements of pCO2 would help to better constrain the lake carbon cycle.

Short-term environmental impact of clam dredging in coastal waters (south of Portugal): chemical disturbance and subsequent recovery of seabed.

PubMed

Falcão, M; Gaspar, M B; Caetano, M; Santos, M N; Vale, C

2003-12-01

The physical and chemical changes in sediment and near bottom water caused by clam dredging were examined during July and September 1999, at two locations Vilamoura (VL) and Armona (AR), south coast of Portugal. Sediment cores and near bottom water were collected simultaneously before dredging (control samples) and within short time intervals (min-h) after dredging. After dredging operations, microphytobenthos coming from the path were accumulated in the re-worked sediment (ridge). Chlorophyll a in superficial sediment increased from 1.2 microg x g(-1) before dredging to 1.7 microg x g(-1) after dredging and these higher values remained for a few hours. However, the expected increase of chlorophyll a in near bottom water due to re-suspension was not observed. After sediment disturbance an instantaneous sorption of phosphorus onto iron oxides occurred in the upper sediment layers (from 2 to 3 micromol x g(-1) before dredging to 4-5 micromol x g(-1) after dredging). A microcosm experiment showed that after sediment disturbance HPO(4)(2-) dissolved in pore water decreased from 40 to 10 microM being simultaneously sorbed onto iron oxides formed in the top layer of sediment. The ammonium, nitrates, organic nitrogen, phosphate and silicate dissolved in pore water decreased immediately after dredging activity and simultaneously an increase in near bottom water was sporadically observed. Generally, the re-establishment of seabed was reached within a short time (min-h), at both stations (VL and AR).

Spatial assessment of water quality using chemometrics in the Pearl River Estuary, China

NASA Astrophysics Data System (ADS)

Wu, Meilin; Wang, Youshao; Dong, Junde; Sun, Fulin; Wang, Yutu; Hong, Yiguo

2017-03-01

A cruise was commissioned in the summer of 2009 to evaluate water quality in the Pearl River Estuary (PRE). Chemometrics such as Principal Component Analysis (PCA), Cluster analysis (CA) and Self-Organizing Map (SOM) were employed to identify anthropogenic and natural influences on estuary water quality. The scores of stations in the surface layer in the first principal component (PC1) were related to NH4-N, PO4-P, NO2-N, NO3-N, TP, and Chlorophyll a while salinity, turbidity, and SiO3-Si in the second principal component (PC2). Similarly, the scores of stations in the bottom layers in PC1 were related to PO4-P, NO2-N, NO3-N, and TP, while salinity, Chlorophyll a, NH4-N, and SiO3-Si in PC2. Results of the PCA identified the spatial distribution of the surface and bottom water quality, namely the Guangzhou urban reach, Middle reach, and Lower reach of the estuary. Both cluster analysis and PCA produced the similar results. Self-organizing map delineated the Guangzhou urban reach of the Pearl River that was mainly influenced by human activities. The middle and lower reaches of the PRE were mainly influenced by the waters in the South China Sea. The information extracted by PCA, CA, and SOM would be very useful to regional agencies in developing a strategy to carry out scientific plans for resource use based on marine system functions.

A Three Year Study of Four Species of Baleen Whales Occurrence in Faial-Pico Islands of the Azores and its Relation to Satellite-derived Surface Biophysical Products

NASA Astrophysics Data System (ADS)

Olio, M.; Peres dos Santos, R.; Tepsich, P.; Martins, A. M.

2016-02-01

In this study, data on the distribution of blue whales (Balaenoptera musculus), fin whales (Balaenoptera physalus), sei whales (Balaenoptera borealis) and humpback whales (Megaptera novaeangliae) in the waters around Faial and Pico islands (Azores archipelago, NE Atlantic) were collected during three years (2012 to 2014) for the months of March to July. During this period of time, we recorded 518 encounters with these species, being 73 in 2012, 86 in 2013 and 359 in 2014. Recordings were made during whale watching trips from two whale watching companies in those islands. In an attempt to understand better the different yearly occurrences, we used MODIS/AQUA-derived Sea Surface Temperature (SST) and Ocean Colour (chlorophyll a) to calculate weekly, bi-weekly, monthly, seasonal and yearly averages. Seasonal effects were removed from the data as well, to infer possible trends with time (2011 to 2014). Climatological anomalies were also calculated using MODIS data from 2003 to 2014. Results show that both years 2011 and 2012 present SST and OC negative anomalies through out the whole years. Higher chlorophyll a positive anomalies are observed during the spring of 2014. Maximum SST and chlorophyll a values ranged between 15.4 to 24.0 C and from 0.0 to 0.3 mg m-3, respectively. Sea surface tempature minimum and maxima anomalies ranged from -1.023 and 1.008 both for 2012, and -0.138 and 0.144 for chlorophyll a (for 2012 and 2014, respectively). Preliminary results suggest that phytoplankton concentration may explain the distribution of some whales species, particulary in 2014 where whale records were highest. These results are being further developed looking at mesoscale variability episodical occurrences on weekly to yearly data. Key words: baleen whales, whale watching, spatial and temporal distribution, remote sensing, mesoscale variability.

Analysis on biomass and productivity of epilithic algae and their relations to environmental factors in the Gufu River basin, Three Gorges Reservoir area, China.

PubMed

Ge, Jiwen; Wu, Shuyuan; Touré, Dado; Cheng, Lamei; Miao, Wenjie; Cao, Huafen; Pan, Xiaoying; Li, Jianfeng; Yao, Minmin; Feng, Liang

2017-12-01

The main purpose of this study conducted from August 2010 was to find biomass and productivity of epilithic algae and their relations to environmental factors and try to explore the restrictive factors affecting the growth of algae in the Gufu River, the one of the branches of Xiangxi River located in the Three Gorges Reservoir of the Yangtze River, Hubei Province, Central China. An improved method of in situ primary productivity measurement was utilized to estimate the primary production of the epilithic algae. It was shown that in rivers, lakes, and reservoirs, algae are the main primary producers and have a central role in the ecosystem. Chlorophyll a concentration and ash-free dry mass (AFDM) were estimated for epilithic algae of the Gufu River basin in Three Gorges Reservoir area. Environmental factors in the Gufu River ecosystem highlighted differences in periphyton chlorophyll a ranging from 1.49 mg m -2 (origin) to 69.58 mg m -2 (terminal point). The minimum and maximum gross primary productivity of epilithic algae were 96.12 and 1439.89 mg C m -2  day -1 , respectively. The mean net primary productivity was 290.24 mg C m -2  day -1 . The mean autotrophic index (AFDM:chlorophyll a) was 407.40. The net primary productivity, community respiration ratio (P/R ratio) ranged from 0.98 to 9.25 with a mean of 2.76, showed that autotrophic productivity was dominant in the river. Relationship between physicochemical characteristics and biomass was discussed through cluster and stepwise regression analysis which indicated that altitude, total nitrogen (TN), NO 3 - -N, and NH 4 + -N were significant environmental factors affecting the biomass of epilithic algae. However, a negative logarithmic relationship between altitude and the chlorophyll a of epilithic algae was high. The results also highlighted the importance of epilithic algae in maintaining the Gufu River basin ecosystems health.

A numerical analysis of shipboard and coastal zone color scanner time series of new production within Gulf Stream cyclonic eddies in the South Atlantic Bight

NASA Technical Reports Server (NTRS)

Pribble, J. Raymond; Walsh, John J.; Dieterle, Dwight A.; Mueller-Karger, Frank E.

1994-01-01

Eddy-induced upwelling occurs along the western edge of the Gulf Stream between Cape Canaveral, Florida, and Cape Hatteras, North Carolina, in the South Atlantic Bight (SAB). Coastal zone color scanner images of 1-km resolution spanning the period April 13-21, 1979, were processed to examine these eddy features in relation to concurrent shipboard and current/temperature measurements at moored arrays. A quasi-one-dimensional (z), time dependent biological model, using only nitrate as a nutrient source, has been combined with a three-dimensional physical model in an attempt to replicate the observed phytoplankton field at the northward edge of an eddy. The model is applicable only to the SAB south of the Charleston Bump, at approximately 31.5 deg N, since no feature analogous to the bump exists in the model bathymetry. The modeled chlorophyll, nitrate, and primary production fields of the euphotic zone are very similar to those obtained from the satellite and shipboard data at the leading edges of the observed eddies south of the Charleston Bump. The horizontal and vertical simulated fluxes of nitrate and chlorophyll show that only approximately 10% of the upwelled nitrate is utilized by the phytoplankton of the modeled grid box on the northern edge of the cyclone, while approximately 75% is lost horizontally, with the remainder still in the euphotic zone after the 10-day period of the model. Loss of chlorophyll due to sinking is very small in this strong upwelling region of the cyclone. The model is relatively insensitive to variations in the sinking parameterization and the external nitrate and chlorophyll fields but is very sensitive to a reduction of the maximum potential growth rate to half that measured. Given the success of this model in simulating the new production of the selcted upwelling region, other upwelling regions for which measurements or successful models of physical and biological quantities and rates exist could be modeled similarly.

[Effects of simulating acid rain on photosynthesis and chlorophyll fluorescence parameters of Quercus glauca Quercus glauca].

PubMed

Wang, Sai; Yi, Li-Ta; Yu, Shu-Quan; Zhang, Chao; Shi, Jing-Jing

2014-08-01

At three levels of simulated acid rainfall intensities with pH values of 2.5 (severe), 40 (medium) and 5.6 (light) respectively, the responses of chlorophyll fluorescence and photosynthetic parameters of Quercus glauca seedlings were studied in three acid rainfall treatments, i. e. only the aboveground of seedlings exposed to acid rain (T1), both of the seedlings and soil exposed to acid rain (T2), only the soil exposed to acid rain (T3) compared with blank control (CK). Under the severe acid rainfall, T1 significantly inhibited chlorophyll synthesis, and thus reduced the primary photochemical efficiency of PS II ( F(v)/F(m)), potential activity of PS II (F(v)/F(o)) , apparent quantum (Y), net photosynthetic rate (P(n)), and transpiration rate (T(r)), but increased the light compensation point (LCP) and dark respiration rate (R(d)) of Q. glauca seedlings. T2 inhibited, but T3 played a little enhancement on the aforementioned parameters of Q. glauca seedlings. Under the conditions of medium and light acid rainfall intensities, the above parameters in the three treatments were higher than that of CK, except with lower R(d). The chlorophyll fluorescence and photosynthetic parameters showed a similar tendency in the three treatments, i. e. T2>T3 >T1. It indicated that T1 had the strongest inhibition on seedlings in condition of the severe acid rainfall, while T2 had the most dramatic facilitating effect on seedlings under the medium and light acid rainfall. Intensity of acid rainfall had significant influences on SPAD, F(v)/F(m), F(v)/F(o), Y, P(n), T(r), and maximum photosynthetic rate (A(max)), whereas treatments of acid rainfall affected SPAD, F(v)/F(m), Y, P(n), T(r), A(max) and light saturation point (LSP). The interaction of acid rainfall intensities and treatments played significant effects on SPAD, F(v)/F(m), Y, P(n) and A(max).

Hyperspectral and multispectral satellite sensors for mapping chlorophyll content in a Mediterranean Pinus sylvestris L. plantation

NASA Astrophysics Data System (ADS)

Navarro-Cerrillo, Rafael Mª; Trujillo, Jesus; de la Orden, Manuel Sánchez; Hernández-Clemente, Rocío

2014-02-01

A new generation of narrow-band hyperspectral remote sensing data offers an alternative to broad-band multispectral data for the estimation of vegetation chlorophyll content. This paper examines the potential of some of these sensors comparing red-edge and simple ratio indices to develop a rapid and cost-effective system for monitoring Mediterranean pine plantations in Spain. Chlorophyll content retrieval was analyzed with the red-edge R750/R710 index and the simple ratio R800/R560 index using the PROSPECT-5 leaf model and the Discrete Anisotropic Radiative Transfer (DART) and experimental approach. Five sensors were used: AHS, CHRIS/Proba, Hyperion, Landsat and QuickBird. The model simulation results obtained with synthetic spectra demonstrated the feasibility of estimating Ca + b content in conifers using the simple ratio R800/R560 index formulated with different full widths at half maximum (FWHM) at the leaf level. This index yielded a r2 = 0.69 for a FWHM of 30 nm and r2 = 0.55 for a FWHM of 70 nm. Experimental results compared the regression coefficients obtained with various multispectral and hyperspectral images with different spatial resolutions at the stand level. The strongest relationships where obtained using high-resolution hyperspectral images acquired with the AHS sensor (r2 = 0.65) while coarser spatial and spectral resolution images yielded a lower root mean square error (QuickBird r2 = 0.42; Landsat r2 = 0.48; Hyperion r2 = 0.56; CHRIS/Proba r2 = 0.57). This study shows the need to estimate chlorophyll content in forest plantations at the stand level with high spatial and spectral resolution sensors. Nevertheless, these results also show the accuracy obtained with medium-resolution sensors when monitoring physiological processes. Generating biochemical maps at the stand level could play a critical rule in the early detection of forest decline processes enabling their use in precision forestry.

[Estimation of forest canopy chlorophyll content based on PROSPECT and SAIL models].

PubMed

Yang, Xi-guang; Fan, Wen-yi; Yu, Ying

2010-11-01

The forest canopy chlorophyll content directly reflects the health and stress of forest. The accurate estimation of the forest canopy chlorophyll content is a significant foundation for researching forest ecosystem cycle models. In the present paper, the inversion of the forest canopy chlorophyll content was based on PROSPECT and SAIL models from the physical mechanism angle. First, leaf spectrum and canopy spectrum were simulated by PROSPECT and SAIL models respectively. And leaf chlorophyll content look-up-table was established for leaf chlorophyll content retrieval. Then leaf chlorophyll content was converted into canopy chlorophyll content by Leaf Area Index (LAD). Finally, canopy chlorophyll content was estimated from Hyperion image. The results indicated that the main effect bands of chlorophyll content were 400-900 nm, the simulation of leaf and canopy spectrum by PROSPECT and SAIL models fit better with the measured spectrum with 7.06% and 16.49% relative error respectively, the RMSE of LAI inversion was 0. 542 6 and the forest canopy chlorophyll content was estimated better by PROSPECT and SAIL models with precision = 77.02%.

The effect of monsoon variability on fish landing in the Sadeng Fishing Port of Yogyakarta, Indonesia

NASA Astrophysics Data System (ADS)

Subarna, D.

2018-03-01

The volume of landing fish of the Sadeng Fishing Port within certain months showed an increase from year to year, especially during June, July and August (JJA). While in other months the fish production was low. The purpose of this research was to understand the influence of monsoon variability on fish landing in the Sadeng Fishing Port. Data were analyzed descriptively as spatial and temporal catch. Data were namely catch fish production collected from fishing port, while satellite and HYCOM model during 2011–2012 period were selected. The wind data, sea surface temperature (SST) and chlorophyll-a were analyzed from ASCAT and MODIS sensors during the Southeast Monsoon. The result showed the wind from the southeasterly provide wind stress at sea level and caused Ekman Transport to move away water mass from the sea shore. The lost water mass in the ocean surface was replaced by cold water from deeper layer which was rich in nutrients. The distribution of chlorophyll-a during the Southeast Monsoon was relatively higher in the southern coast of Java than during the Northwest monsoon. The SST showed approximately 25.3 °C. The abundance of nutrients indicated by the distribution of chlorophyll-a around the coast during the Southeast Monsoon, will enhance the arrival of larger fish. Thus, it can be understood that during June, July, and August the catch production is higher than the other months.

Comprehensive chlorophyll composition in the main edible seaweeds.

PubMed

Chen, Kewei; Ríos, José Julián; Pérez-Gálvez, Antonio; Roca, María

2017-08-01

Natural chlorophylls present in seaweeds have been studied regarding their biological activities and health benefit effects. However, detailed studies regarding characterization of the complete chlorophyll profile either qualitatively and quantitatively are scarce. This work deals with the comprehensive spectrometric study of the chlorophyll derivatives present in the five main coloured edible seaweeds. The novel complete MS 2 characterization of five chlorophyll derivatives: chlorophyll c 2 , chlorophyll c 1 , purpurin-18 a, pheophytin d and phytyl-purpurin-18 a has allowed to obtain fragmentation patterns associated with their different structural features. New chlorophyll derivatives have been identified and quantified by first time in red, green and brown seaweeds, including some oxidative structures. Quantitative data of the chlorophyll content comes to achieve significant information for food composition databases in bioactive compounds. Copyright © 2017 Elsevier Ltd. All rights reserved.

The Epiphytic Fern Elaphoglossum luridum (Fée) Christ. (Dryopteridaceae) from Central and South America: Morphological and Physiological Responses to Water Stress

PubMed Central

Minardi, Bruno Degaspari; Voytena, Ana Paula Lorenzen; Randi, Áurea Maria

2014-01-01

Elaphoglossum luridum (Fée) Christ. (Dryopteridaceae) is an epiphytic fern of the Atlantic Forest (Brazil). Anatomical and physiological studies were conducted to understand how this plant responds to water stress. The E. luridum frond is coriaceus and succulent, presenting trichomes, relatively thick cuticle, and sinuous cell walls in both abaxial and adaxial epidermis. Three treatments were analyzed: control, water deficit, and abscisic acid (ABA). Physiological studies were conducted through analysis of relative water content (RWC), photosynthetic pigments, chlorophyll a fluorescence, and malate content. No changes in RWC were observed among treatments; however, significant decreases in chlorophyll a content and photosynthetic parameters, including optimal irradiance (I opt) and maximum electron transport rate (ETRmax), were determined by rapid light curves (RLC). No evidence of crassulacean acid metabolism (CAM) pathway was observed in E. luridum in response to either water deficit or exogenous application of ABA. On the other hand, malate content decreased in the E. luridum frond after ABA treatment, seeming to downregulate malate metabolism at night, possibly through tricarboxylic acid (TCA) cycle regulation. PMID:25386618

Temporal variability in chlorophyll fluorescence of back-reef corals in Ofu, American Samoa

USGS Publications Warehouse

Piniak, G.A.; Brown, E.K.

2009-01-01

Change in the yield of chlorophyll a fluorescence is a common indicator of thermal stress in corals. The present study reports temporal variability in quantum yield measurements for 10 coral species in Ofu, American Samoa - a place known to experience elevated and variable seawater temperatures. In winter, the zooxanthellae generally had higher dark-adapted maximum quantum yield (F v/Fm), higher light- adapted effective quantum yield (??F/F'm), and lower relative electron transport rates (rETR) than in the summer. Temporal changes appeared unrelated to the expected bleaching sensitivity of corals. All species surveyed, with the exception of Montipora grisea, demonstrated significant temporal changes in the three fluorescence parameters. Fluorescence responses were influenced by the microhabitat - temporal differences in fluorescence parameters were usually observed in the habitat with a more variable temperature regime (pool 300), while differences in Fv/Fm between species were observed only in the more environmentally stable habitat (pool 400). Such species-specific responses and microhabitat variability should be considered when attempting to determine whether observed in situ changes are normal seasonal changes or early signs of bleaching. ?? 2009 Marine Biological Laboratory.

Biodiversity patterns of plankton assemblages at the extremes of the Red Sea.

PubMed

Pearman, J K; Kürten, S; Sarma, Y V B; Jones, B H; Carvalho, S

2016-03-01

The diversity of microbial plankton has received limited attention in the main basin of the Red Sea. This study investigates changes in the community composition and structure of prokaryotes and eukaryotes at the extremes of the Red Sea along cross-shelf gradients and between the surface and deep chlorophyll maximum. Using molecular methods to target both the 16S and 18S rRNA genes, it was observed that the dominant prokaryotic classes were Acidimicrobiia, Alphaproteobacteria and Cyanobacteria, regardless of the region and depth. The eukaryotes Syndiniophyceae and Dinophyceae between them dominated in the north, with Bacillariophyceae and Mamiellophyceae more prominent in the southern region. Significant differences were observed for prokaryotes and eukaryotes for region, depth and distance from shore. Similarly, it was noticed that communities became less similar with increasing distance from the shore. Canonical correspondence analysis at the class level showed that Mamiellophyceae and Bacillariophyceae correlated with increased nutrients and chlorophyll a found in the southern region, which is influenced by the input of Gulf of Aden Intermediate Water. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Monte Carlo simulation of spectral reflectance and BRDF of the bubble layer in the upper ocean.

PubMed

Ma, Lanxin; Wang, Fuqiang; Wang, Chengan; Wang, Chengchao; Tan, Jianyu

2015-09-21

The presence of bubbles can significantly change the radiative properties of seawater and these changes will affect remote sensing and underwater target detection. In this work, the spectral reflectance and bidirectional reflectance characteristics of the bubble layer in the upper ocean are investigated using the Monte Carlo method. The Hall-Novarini (HN) bubble population model, which considers the effect of wind speed and depth on the bubble size distribution, is used. The scattering coefficients and the scattering phase functions of bubbles in seawater are calculated using Mie theory, and the inherent optical properties of seawater for wavelengths between 300 nm and 800 nm are related to chlorophyll concentration (Chl). The effects of bubble coating, Chl, and bubble number density on the spectral reflectance of the bubble layer are studied. The bidirectional reflectance distribution function (BRDF) of the bubble layer for both normal and oblique incidence is also investigated. The results show that bubble populations in clear waters under high wind speed conditions significantly influence the reflection characteristics of the bubble layer. Furthermore, the contribution of bubble populations to the reflection characteristics is mainly due to the strong backscattering of bubbles that are coated with an organic film.

An extended PROSPECT: Advance in the leaf optical properties model separating total chlorophylls into chlorophyll a and b.

PubMed

Zhang, Yao; Huang, Jingfeng; Wang, Fumin; Blackburn, George Alan; Zhang, Hankui K; Wang, Xiuzhen; Wei, Chuanwen; Zhang, Kangyu; Wei, Chen

2017-07-25

The PROSPECT leaf optical model has, to date, well-separated the effects of total chlorophyll and carotenoids on leaf reflectance and transmittance in the 400-800 nm. Considering variations in chlorophyll a:b ratio with leaf age and physiological stress, a further separation of total plant-based chlorophylls into chlorophyll a and chlorophyll b is necessary for advanced monitoring of plant growth. In this study, we present an extended version of PROSPECT model (hereafter referred to as PROSPECT-MP) that can combine the effects of chlorophyll a, chlorophyll b and carotenoids on leaf directional hemispherical reflectance and transmittance (DHR and DHT) in the 400-800 nm. The LOPEX93 dataset was used to evaluate the capabilities of PROSPECT-MP for spectra modelling and pigment retrieval. The results show that PROSPECT-MP can both simultaneously retrieve leaf chlorophyll a and b, and also performs better than PROSPECT-5 in retrieving carotenoids concentrations. As for the simulation of DHR and DHT, the performances of PROSPECT-MP are similar to that of PROSPECT-5. This study demonstrates the potential of PROSPECT-MP for improving capabilities of remote sensing of leaf photosynthetic pigments (chlorophyll a, chlorophyll b and carotenoids) and for providing a framework for future refinements in the modelling of leaf optical properties.

Influence of diatom diversity on the ocean biological carbon pump

NASA Astrophysics Data System (ADS)

Tréguer, Paul; Bowler, Chris; Moriceau, Brivaela; Dutkiewicz, Stephanie; Gehlen, Marion; Aumont, Olivier; Bittner, Lucie; Dugdale, Richard; Finkel, Zoe; Iudicone, Daniele; Jahn, Oliver; Guidi, Lionel; Lasbleiz, Marine; Leblanc, Karine; Levy, Marina; Pondaven, Philippe

2018-01-01

Diatoms sustain the marine food web and contribute to the export of carbon from the surface ocean to depth. They account for about 40% of marine primary productivity and particulate carbon exported to depth as part of the biological pump. Diatoms have long been known to be abundant in turbulent, nutrient-rich waters, but observations and simulations indicate that they are dominant also in meso- and submesoscale structures such as fronts and filaments, and in the deep chlorophyll maximum. Diatoms vary widely in size, morphology and elemental composition, all of which control the quality, quantity and sinking speed of biogenic matter to depth. In particular, their silica shells provide ballast to marine snow and faecal pellets, and can help transport carbon to both the mesopelagic layer and deep ocean. Herein we show that the extent to which diatoms contribute to the export of carbon varies by diatom type, with carbon transfer modulated by the Si/C ratio of diatom cells, the thickness of the shells and their life strategies; for instance, the tendency to form aggregates or resting spores. Model simulations project a decline in the contribution of diatoms to primary production everywhere outside of the Southern Ocean. We argue that we need to understand changes in diatom diversity, life cycle and plankton interactions in a warmer and more acidic ocean in much more detail to fully assess any changes in their contribution to the biological pump.

Dynamical Characterization of a Low Oxygen Submesoscale Coherent Vortex in the Eastern North Atlantic Ocean

NASA Astrophysics Data System (ADS)

Pietri, A.; Karstensen, J.

2018-03-01

A submesoscale coherent vortex (SCV) with a low oxygen core is characterized from underwater glider and mooring observations from the eastern tropical North Atlantic, north of the Cape Verde Islands. The eddy crossed the mooring with its center and a 1 month time series of the SCV's hydrographic and upper 100 m currents structure was obtained. About 45 days after, and ˜100 km west, the SCV frontal zone was surveyed in high temporal and spatial resolution using an underwater glider. Satellite altimetry showed the SCV was formed about 7 months before at the Mauritanian coast. The SCV was located at 80-100 m depth, its diameter was ˜100 km and its maximum swirl velocity ˜0.4 m s-1. A Burger number of 0.2 and a vortex Rossby number 0.15 indicate a flat lens in geostrophic balance. Mooring and glider data show in general comparable dynamical and thermohaline structures, the glider in high spatial resolution, the mooring in high temporal resolution. Surface maps of chlorophyll concentration suggest high productivity inside and around the SCV. The low potential vorticity (PV) core of the SCV is surrounded by filamentary structures, sloping down at different angles from the mixed layer base and with typical width of 10-20 km and a vertical extent of 50-100 m.

Dynamics of Inorganic Nutrients in Intertidal Sediments: Porewater, Exchangeable, and Intracellular Pools

PubMed Central

Garcia-Robledo, Emilio; Bohorquez, Julio; Corzo, Alfonso; Jimenez-Arias, Juan L.; Papaspyrou, Sokratis

2016-01-01

The study of inorganic nutrients dynamics in shallow sediments usually focuses on two main pools: porewater (PW) nutrients and exchangeable (EX) ammonium and phosphate. Recently, it has been found that microphytobenthos (MPB) and other microorganisms can accumulate large amounts of nutrients intracellularly (IC), highlighting the biogeochemical importance of this nutrient pool. Storing nutrients could support the growth of autotrophs when nutrients are not available, and could also provide alternative electron acceptors for dissimilatory processes such as nitrate reduction. Here, we studied the magnitude and relative importance of these three nutrient pools (PW, IC, and EX) and their relation to chlorophylls (used as a proxy for MPB abundance) and organic matter (OM) contents in an intertidal mudflat of Cadiz Bay (Spain). MPB was localized in the first 4 mm of the sediment and showed a clear seasonal pattern; highest chlorophylls content was found during autumn and lowest during spring-summer. The temporal and spatial distribution of nutrients pools and MPB were largely correlated. Ammonium was higher in the IC and EX fractions, representing on average 59 and 37% of the total ammonium pool, respectively. Similarly, phosphate in the IC and EX fractions accounted on average for 40 and 31% of the total phosphate pool, respectively. Nitrate in the PW was low, suggesting low nitrification activity and rapid consumption. Nitrate accumulated in the IC pool during periods of moderate MPB abundance, being up to 66% of the total nitrate pool, whereas it decreased when chlorophyll concentration peaked likely due to a high nitrogen demand. EX-Nitrate accounted for the largest fraction of total sediment nitrate, 66% on average. The distribution of EX-Nitrate was significantly correlated with chlorophyll and OM, which probably indicates a relation of this pool to an increased availability of sites for ionic adsorption. This EX-Nitrate pool could represent an alternative nitrate source with significant concentrations available to the microbial community, deeper in the sediment below the oxic layer. PMID:27303370

Dynamics of Inorganic Nutrients in Intertidal Sediments: Porewater, Exchangeable, and Intracellular Pools.

PubMed

Garcia-Robledo, Emilio; Bohorquez, Julio; Corzo, Alfonso; Jimenez-Arias, Juan L; Papaspyrou, Sokratis

2016-01-01

The study of inorganic nutrients dynamics in shallow sediments usually focuses on two main pools: porewater (PW) nutrients and exchangeable (EX) ammonium and phosphate. Recently, it has been found that microphytobenthos (MPB) and other microorganisms can accumulate large amounts of nutrients intracellularly (IC), highlighting the biogeochemical importance of this nutrient pool. Storing nutrients could support the growth of autotrophs when nutrients are not available, and could also provide alternative electron acceptors for dissimilatory processes such as nitrate reduction. Here, we studied the magnitude and relative importance of these three nutrient pools (PW, IC, and EX) and their relation to chlorophylls (used as a proxy for MPB abundance) and organic matter (OM) contents in an intertidal mudflat of Cadiz Bay (Spain). MPB was localized in the first 4 mm of the sediment and showed a clear seasonal pattern; highest chlorophylls content was found during autumn and lowest during spring-summer. The temporal and spatial distribution of nutrients pools and MPB were largely correlated. Ammonium was higher in the IC and EX fractions, representing on average 59 and 37% of the total ammonium pool, respectively. Similarly, phosphate in the IC and EX fractions accounted on average for 40 and 31% of the total phosphate pool, respectively. Nitrate in the PW was low, suggesting low nitrification activity and rapid consumption. Nitrate accumulated in the IC pool during periods of moderate MPB abundance, being up to 66% of the total nitrate pool, whereas it decreased when chlorophyll concentration peaked likely due to a high nitrogen demand. EX-Nitrate accounted for the largest fraction of total sediment nitrate, 66% on average. The distribution of EX-Nitrate was significantly correlated with chlorophyll and OM, which probably indicates a relation of this pool to an increased availability of sites for ionic adsorption. This EX-Nitrate pool could represent an alternative nitrate source with significant concentrations available to the microbial community, deeper in the sediment below the oxic layer.

Dynamics of short-term acclimation to UV radiation in marine diatoms.

PubMed

Fouqueray, Manuela; Mouget, Jean-Luc; Morant-Manceau, Annick; Tremblin, Gérard

2007-11-12

In order to investigate the dynamics of the acclimation of marine diatoms to ultraviolet radiation (UVR), Amphora coffeaeformis, Odontella aurita and Skeletonema costatum were exposed for 5 h per day to a combination of UVA and UVB (UVBR/UVAR ratio 4.5%) with a total UVR daily dose of 110 kJ m(-2), which is equivalent to that observed in the natural environment. This treatment was applied in the middle of the photoperiod and was repeated on five successive days. During the UVR treatment, chlorophyll fluorescence parameters were monitored, damage and repair constants were calculated from effective quantum yield values (phi(PSII)), and rapid light curves (electron transport rate versus irradiance curves using short light steps of different intensity) were plotted to determine the maximum relative electron transport rate (rETR(max)) and maximum light use efficiency (alpha). In all species the growth rate was lower than control from day 1-3, but increased thereafter, except for S. costatum. The cellular chlorophyll a content increased significantly with repeated daily exposure to UVR for A. coffeaeformis only. In all species, the fluorescence parameters (F(m), the maximum fluorescence level measured in the dark, phi(PSII), rETR(max) and alpha) decreased during UVR exposure, in contrast to F(0) (the minimum fluorescence level measured in the dark). The response to UVR stress was species-specific. S. costatum was very sensitive, and failed to survive for more than three days, whereas A. coffeaeformis and O. aurita were able to acclimate to UVR stress. These two species used different strategies. In A. coffeaeformis, the repair constant was lower than the damage constant, but phi(PSII) values returned to baseline values at the beginning of each experimental day, indicating that an effective active recovery process occurred after stress. In O. aurita, the repair processes took place during the stress, and could account for the UVR tolerance of this species.

Seasonal Variation in the Spatial Distribution of Basking Sharks (Cetorhinus maximus) in the Lower Bay of Fundy, Canada

PubMed Central

Siders, Zachary A.; Westgate, Andrew J.; Johnston, David W.; Murison, Laurie D.; Koopman, Heather N.

2013-01-01

The local distribution of basking sharks in the Bay of Fundy (BoF) is unknown despite frequent occurrences in the area from May to November. Defining this species’ spatial habitat use is critical for accurately assessing its Special Concern conservation status in Atlantic Canada. We developed maximum entropy distribution models for the lower BoF and the northeast Gulf of Maine (GoM) to describe spatiotemporal variation in habitat use of basking sharks. Under the Maxent framework, we assessed model responses and distribution shifts in relation to known migratory behavior and local prey dynamics. We used 10 years (2002-2011) of basking shark surface sightings from July-October acquired during boat-based surveys in relation to chlorophyll-a concentration, sea surface temperature, bathymetric features, and distance to seafloor contours to assess habitat suitability. Maximum entropy estimations were selected based on AICc criterion and used to predict habitat utilizing three model-fitting routines as well as converted to binary suitable/non-suitable habitat using the maximum sensitivity and specificity threshold. All models predicted habitat better than random (AUC values >0.796). From July-September, a majority of habitat was in the BoF, in waters >100 m deep, and in the Grand Manan Basin. In October, a majority of the habitat shifted southward into the GoM and to areas >200 m deep. Model responses suggest that suitable habitat from July - October is dependent on a mix of distance to the 0, 100, 150, and 200 m contours but in some models on sea surface temperature (July) and chlorophyll-a (August and September). Our results reveal temporally dynamic habitat use of basking sharks within the BoF and GoM. The relative importance of predictor variables suggests that prey dynamics constrained the species distribution in the BoF. Also, suitable habitat shifted minimally from July-September providing opportunities to conserve the species during peak abundance in the region. PMID:24324747

The Use of a Chlorophyll Meter (SPAD-502) for Field Determinations of Red Mangrove (Rhizophora Mangle L.) Leaf Chlorophyll Amount

NASA Technical Reports Server (NTRS)

Connelly, Xana M.

1997-01-01

The red mangrove Rhizophora mangle L., is a halophytic woody spermatophyte common to the land-sea interface of tropical and subtropical intertidal zones. It has been reported that 60 to 75% of the coastline of the earth's tropical regions are lined with mangroves. Mangroves help prevent shoreline erosion, provide breeding, nesting and feeding areas for many marine animals and birds. Mangroves are important contributors of primary production in the coastal environment, and this is largely proportional to the standing crop of leaf chlorophylls. Higher intensities of ultraviolet radiation, resulting from stratospheric ozone depletion, can lead to a reduction of chlorophyll in terrestrial plants. Since the most common method for determining chlorophyll concentration is by extraction and this is labor intensive and time consuming, few studies on photosynthetic pigments of mangroves have been reported. Chlorophyll meter readings have been related to leaf chlorophyll content in apples and maples. It has also been correlated to nitrogen status in corn and cotton. Peterson et al., (1993) used a chlorophyll meter to detect nitrogen deficiency in crops and in determining the need for additional nitrogen fertilizer. Efforts to correlate chlorophyll meter measurements to chlorophyll content of mangroves have not been reported. This paper describes the use of a hand-held chlorophyll meter (Minolta SPAD-502) to determine the amount of red mangrove foliar chlorophyll present in the field.

Indicators: Chlorophyll a

EPA Pesticide Factsheets

Chlorophyll allows plants (including algae) to photosynthesize, i.e., use sunlight to convert simple molecules into organic compounds. Chlorophyll a is the predominant type of chlorophyll found in green plants and algae.

Laser remote sensing of an algal bloom in a freshwater reservoir

NASA Astrophysics Data System (ADS)

Grishin, M. Ya; Lednev, V. N.; Pershin, S. M.; Bunkin, A. F.; Kobylyanskiy, V. V.; Ermakov, S. A.; Kapustin, I. A.; Molkov, A. A.

2016-12-01

Laser remote sensing of an algal bloom in a freshwater reservoir on the Volga River in central Russia was carried out. The compact Raman lidar was installed on a small ship to probe the properties of the surface water layer in different typical regions of Gorky Water Reservoir. Elastic and Raman scattering as well as chlorophyll fluorescence were quantified, mapped and compared with data acquired by a commercial salinity, temperature and depth probe (STD probe) equipped with a blue-green algae sensor. Good correlation between lidar and STD measurements was established.

Mesoscale Eddies Control the Timing of Spring Phytoplankton Blooms: A Case Study in the Japan Sea

NASA Astrophysics Data System (ADS)

Maúre, E. R.; Ishizaka, J.; Sukigara, C.; Mino, Y.; Aiki, H.; Matsuno, T.; Tomita, H.; Goes, J. I.; Gomes, H. R.

2017-11-01

Satellite Chlorophyll a (CHL) data were used to investigate the influence of mesoscale anticyclonic eddies (AEs) and cyclonic eddies (CEs) on the timing of spring phytoplankton bloom initiation around the Yamato Basin (133-139°E and 35-39.5°N) in the Japan Sea, for the period 2002-2011. The results showed significant differences between AEs and CEs in the timing and initiation mechanism of the spring phytoplankton bloom. Blooms were initiated earlier in CEs which were characterized by shallow mixed-layer depths (< 100 m). The early blooming preceded the end of winter cooling (i.e., while net heat flux (Q0) is still negative) and is initiated by the increased average light within the shallow mixed-layer depth. Conversely, blooms appeared in the AEs despite deeper mixed-layer depth (> 100 m) but close to the commencement of positive Q0. This suggests that the relaxation of turbulent mixing is crucial for the bloom initiation in AEs.

Quantifying subtropical North Pacific gyre mixed layer primary productivity from Seaglider observations of diel oxygen cycles

NASA Astrophysics Data System (ADS)

Nicholson, David P.; Wilson, Samuel T.; Doney, Scott C.; Karl, David M.

2015-05-01

Using autonomous underwater gliders, we quantified diurnal periodicity in dissolved oxygen, chlorophyll, and temperature in the subtropical North Pacific near the Hawaii Ocean Time-series (HOT) Station ALOHA during summer 2012. Oxygen optodes provided sufficient stability and precision to quantify diel cycles of average amplitude of 0.6 µmol kg-1. A theoretical diel curve was fit to daily observations to infer an average mixed layer gross primary productivity (GPP) of 1.8 mmol O2 m-3 d-1. Cumulative net community production (NCP) over 110 days was 500 mmol O2 m-2 for the mixed layer, which averaged 57 m in depth. Both GPP and NCP estimates indicated a significant period of below-average productivity at Station ALOHA in 2012, an observation confirmed by 14C productivity incubations and O2/Ar ratios. Given our success in an oligotrophic gyre where biological signals are small, our diel GPP approach holds promise for remote characterization of productivity across the spectrum of marine environments.

Chlorophyll loss associated with heat-induced senescence in bentgrass.

PubMed

Jespersen, David; Zhang, Jing; Huang, Bingru

2016-08-01

Heat stress-induced leaf senescence is characterized by the loss of chlorophyll from leaf tissues. The objectives of this study were to examine genetic variations in the level of heat-induced leaf senescence in hybrids of colonial (Agrostis capillaris)×creeping bentgrass (Agrostis stolonifera) contrasting in heat tolerance, and determine whether loss of leaf chlorophyll during heat-induced leaf senescence was due to suppressed chlorophyll synthesis and/or accelerated chlorophyll degradation in the cool-season perennial grass species. Plants of two hybrid backcross genotypes ('ColxCB169' and 'ColxCB190') were exposed to heat stress (38/33°C, day/night) for 28 d in growth chambers. The analysis of turf quality, membrane stability, photochemical efficiency, and chlorophyll content demonstrated significant variations in the level of leaf senescence induced by heat stress between the two genotypes, with ColXCB169 exhibiting a lesser degree of decline in chlorophyll content, photochemical efficiency and membrane stability than ColXCB190. The assays of enzymatic activity or gene expression of several major chlorophyll-synthesizing (porphobilinogen deaminase, Mg-chelatase, protochlorophyllide-reductase) and chlorophyll-degrading enzymes (chlorophyllase, pheophytinase, and chlorophyll-degrading peroxidase) indicated heat-induced decline in leaf chlorophyll content was mainly due to accelerated chlorophyll degradation, as manifested by increased gene expression levels of chlorophyllase and pheophytinase, and the activity of pheophytinase (PPH), while chlorophyll-synthesizing genes and enzymatic activities were not differentially altered by heat stress in the two genotypes. The analysis of heat-induced leaf senescence of pph mutants of Arabidopsis further confirmed that PPH could be one enzymes that plays key roles in regulating heat-accelerated chlorophyll degradation. Further research on enzymes responsible in part for the loss of chlorophyll during heat-induced senescence could aid in the development of genotypes with stay-green traits either through marker assisted selection or transgenic approaches. Copyright © 2016. Published by Elsevier Ireland Ltd.

A Developmental Study of Photosystem I Peripheral Chlorophyll Proteins 1

PubMed Central

Mullet, John E.; Burke, John J.; Arntzen, Charles J.

1980-01-01

An isolated “native” photosystem I (PSI complex) contains three spectral populations of chlorophyll a antennae (Mullet, Burke, Arntzen 1980 Plant Physiol 65: 814-822). It was hypothesized that nearly one-half of these antennae (≃45 Chl/P700) are associated with polypeptides of 21,500 to 24,500 daltons. The present study utilizes two developmental systems to verify this association. Chloroplasts were isolated from a Chl b-less barley mutant and from partially-developed cucumber cotyledons (greened under intermittent illumination [ImL] chloroplasts) and were compared to control chloroplasts isolated from wild-type barley and mature cucumber. Both the mutant and ImL chloroplasts exhibited a long wavelength fluorescence maximum at 724 nanometers at 77 K as compared to 735 to 738 nanometers emission maximum in the respective controls. Both the mutant and ImL chloroplasts were deficient in polypeptides of 21,500 to 24,500 daltons which were present in control membranes and in PSI fractions isolated from control membranes. In light-induced maturation of the ImL cucumbers, the synthesis of polypeptides in the 21,500 to 24,500 molecular weight range paralleled the appearance of PSI Chl species fluorescing at long wavelength (≃735 nm). The PSI spectral properties of the control membranes were retained in isolated PSI particles containing 100 to 120 Chl/P700 (PSI-110). Detergent extraction of PSI-110 removed polypeptides of 21,500 to 24,500 daltons plus ≃ 45 Chl/P700. The antennae-depleted PSI particle mimics PSI properties exhibited by incompletely differentiated mutant or ImL chloroplasts. Images PMID:16661289

Optimizing an estuarine water quality monitoring program through an entropy-based hierarchical spatiotemporal Bayesian framework

NASA Astrophysics Data System (ADS)

Alameddine, Ibrahim; Karmakar, Subhankar; Qian, Song S.; Paerl, Hans W.; Reckhow, Kenneth H.

2013-10-01

The total maximum daily load program aims to monitor more than 40,000 standard violations in around 20,000 impaired water bodies across the United States. Given resource limitations, future monitoring efforts have to be hedged against the uncertainties in the monitored system, while taking into account existing knowledge. In that respect, we have developed a hierarchical spatiotemporal Bayesian model that can be used to optimize an existing monitoring network by retaining stations that provide the maximum amount of information, while identifying locations that would benefit from the addition of new stations. The model assumes the water quality parameters are adequately described by a joint matrix normal distribution. The adopted approach allows for a reduction in redundancies, while emphasizing information richness rather than data richness. The developed approach incorporates the concept of entropy to account for the associated uncertainties. Three different entropy-based criteria are adopted: total system entropy, chlorophyll-a standard violation entropy, and dissolved oxygen standard violation entropy. A multiple attribute decision making framework is adopted to integrate the competing design criteria and to generate a single optimal design. The approach is implemented on the water quality monitoring system of the Neuse River Estuary in North Carolina, USA. The model results indicate that the high priority monitoring areas identified by the total system entropy and the dissolved oxygen violation entropy criteria are largely coincident. The monitoring design based on the chlorophyll-a standard violation entropy proved to be less informative, given the low probabilities of violating the water quality standard in the estuary.

Chlorophyll Breakdown in Senescent Banana Leaves: Catabolism Reprogrammed for Biosynthesis of Persistent Blue Fluorescent Tetrapyrroles

PubMed Central

Vergeiner, Clemens; Banala, Srinivas; Kräutler, Bernhard

2013-01-01

Chlorophyll breakdown is a visual phenomenon of leaf senescence and fruit ripening. It leads to the formation of colorless chlorophyll catabolites, a group of (chlorophyll-derived bilin-type) linear tetrapyrroles. Here, analysis and structure elucidation of the chlorophyll breakdown products in leaves of banana (Musa acuminata) is reported. In senescent leaves of this monocot all chlorophyll catabolites identified were hypermodified fluorescent chlorophyll catabolites (hmFCCs). Surprisingly, nonfluorescent chlorophyll catabolites (NCCs) were not found, the often abundant and apparently typical final chlorophyll breakdown products in senescent leaves. As a rule, FCCs exist only fleetingly, and they isomerize rapidly to NCCs in the senescent plant cell. Amazingly, in the leaves of banana plants, persistent hmFCCs were identified that accounted for about 80 % of the chlorophyll broken down, and yellow leaves of M. acuminata display a strong blue luminescence. The structures of eight hmFCCs from banana leaves were analyzed by spectroscopic means. The massive accumulation of the hmFCCs in banana leaves, and their functional group characteristics, indicate a chlorophyll breakdown path, the downstream transformations of which are entirely reprogrammed towards the generation of persistent and blue fluorescent FCCs. As expressed earlier in related studies, the present findings call for attention, as to still elusive biological roles of these linear tetrapyrroles. PMID:23946204

Ocean Chlorophyll as a Precursor of ENSO: An Earth System Modeling Study

NASA Astrophysics Data System (ADS)

Park, Jong-Yeon; Dunne, John P.; Stock, Charles A.

2018-02-01

Ocean chlorophyll concentration, a proxy for phytoplankton, is strongly influenced by internal ocean dynamics such as those associated with El Niño-Southern Oscillation (ENSO). Observations show that ocean chlorophyll responses to ENSO generally lead sea surface temperature (SST) responses in the equatorial Pacific. A long-term global Earth system model simulation incorporating marine biogeochemical processes also exhibits a preceding chlorophyll response. In contrast to simulated SST anomalies, which significantly lag the wind-driven subsurface heat response to ENSO, chlorophyll anomalies respond rapidly. Iron was found to be the key factor connecting the simulated surface chlorophyll anomalies to the subsurface ocean response. Westerly wind bursts decrease central Pacific chlorophyll by reducing iron supply through wind-driven thermocline deepening but increase western Pacific chlorophyll by enhancing the influx of coastal iron from the maritime continent. Our results mechanistically support the potential for chlorophyll-based indices to inform seasonal ENSO forecasts beyond previously identified SST-based indices.

The role of chlorophyll b in photosynthesis: Hypothesis

PubMed Central

Eggink, Laura L; Park, Hyoungshin; Hoober, J Kenneth

2001-01-01

Background The physico-chemical properties of chlorophylls b and c have been known for decades. Yet the mechanisms by which these secondary chlorophylls support assembly and accumulation of light-harvesting complexes in vivo have not been resolved. Presentation Biosynthetic modifications that introduce electronegative groups on the periphery of the chlorophyll molecule withdraw electrons from the pyrrole nitrogens and thus reduce their basicity. Consequently, the tendency of the central Mg to form coordination bonds with electron pairs in exogenous ligands, a reflection of its Lewis acid properties, is increased. Our hypothesis states that the stronger coordination bonds between the Mg atom in chlorophyll b and chlorophyll c and amino acid sidechain ligands in chlorophyll a/b- and a/c-binding apoproteins, respectively, enhance their import into the chloroplast and assembly of light-harvesting complexes. Testing Several apoproteins of light-harvesting complexes, in particular, the major protein Lhcb1, are not detectable in leaves of chlorophyll b-less plants. A direct test of the hypothesis – with positive selection – is expression, in mutant plants that synthesize only chlorophyll a, of forms of Lhcb1 in which weak ligands are replaced with stronger Lewis bases. Implications The mechanistic explanation for the effects of deficiencies in chlorophyll b or c points to the need for further research on manipulation of coordination bonds between these chlorophylls and chlorophyll-binding proteins. Understanding these interactions will possibly lead to engineering plants to expand their light-harvesting antenna and ultimately their productivity. PMID:11710960

[Vegetation index estimation by chlorophyll content of grassland based on spectral analysis].

PubMed

Xiao, Han; Chen, Xiu-Wan; Yang, Zhen-Yu; Li, Huai-Yu; Zhu, Han

2014-11-01

Comparing the methods of existing remote sensing research on the estimation of chlorophyll content, the present paper confirms that the vegetation index is one of the most practical and popular research methods. In recent years, the increasingly serious problem of grassland degradation. This paper, firstly, analyzes the measured reflectance spectral curve and its first derivative curve in the grasslands of Songpan, Sichuan and Gongger, Inner Mongolia, conducts correlation analysis between these two spectral curves and chlorophyll content, and finds out the regulation between REP (red edge position) and grassland chlorophyll content, that is, the higher the chlorophyll content is, the higher the REIP (red-edge inflection point) value would be. Then, this paper constructs GCI (grassland chlorophyll index) and selects the most suitable band for retrieval. Finally, this paper calculates the GCI by the use of satellite hyperspectral image, conducts the verification and accuracy analysis of the calculation results compared with chlorophyll content data collected from field of twice experiments. The result shows that for grassland chlorophyll content, GCI has stronger sensitivity than other indices of chlorophyll, and has higher estimation accuracy. GCI is the first proposed to estimate the grassland chlorophyll content, and has wide application potential for the remote sensing retrieval of grassland chlorophyll content. In addition, the grassland chlorophyll content estimation method based on remote sensing retrieval in this paper provides new research ideas for other vegetation biochemical parameters' estimation, vegetation growth status' evaluation and grassland ecological environment change's monitoring.

The Consequences of Internal Waves for Phytoplankton Focusing on the Distribution and Production of Planktothrix rubescens

PubMed Central

Hingsamer, Peter; Peeters, Frank; Hofmann, Hilmar

2014-01-01

Consequences of internal wave motion for phytoplankton and in particular for the distribution and production of the harmful and buoyant cyanobacterium Planktothrix rubescens were investigated based on data from two field campaigns conducted in Lake Ammer during summer 2009 and 2011. In both years, P. rubescens dominated the phytoplankton community and formed a deep chlorophyll maximum (DCM) in the metalimnion. Internal wave motions caused vertical displacement of P. rubescens of up to 6 m and 10 m, respectively. Vertical displacements of isotherms and of iso-concentration lines of P. rubescens from the same depth range coincided, suggesting that P. rubescens did not or could not regulate its buoyancy to prevent wave-induced vertical displacements. Diatoms dominated the phytoplankton community in the epilimnion and were vertically separated from P. rubescens. The thickness of the diatom layer, but not the diatom concentrations within the layer, changed in phase with the changes in the thickness of the epilimnion caused by internal wave motions. Seiche induced vertical displacements of P. rubescens caused fluctuations in the light intensity available at the depth of the P. rubescens layer. The interplay between seiche induced vertical displacements of the P. rubescens layer and the daily cycle of incident light lead to differences in the daily mean available light intensity between lake ends by up to a factor of ∼3. As a consequence, the daily mean specific oxygen production rate of P. rubescens differed by up to a factor of ∼7 between lake ends. The horizontal differences in the specific oxygen production rate of P. rubescens were persistent over several days suggesting that the associated production of P. rubescens biomass may lead to phytoplankton patchiness. The effect of internal seiches on the spatial heterogeneity and the persistence of horizontal differences in production, however, depend on the timing and the synchronization between internal wave motion and the daily course of incident light intensity. Vertical displacements caused by internal waves could be distinguished from other factors influencing the distribution of P. rubescens (e.g. active buoyancy control, production, vertical mixing) by a temperature-based data transformation. This technique may be of general use for separating wave-induced transport from other processes (e.g. sedimentation, vertical mixing) that affect the distributions of dissolved substances and suspended particles. PMID:25102279

Subtropical Gyre Variability Observed by Ocean Color Satellites

NASA Technical Reports Server (NTRS)

McClain, Charles R.; Signorini, Sergio R.; Christian, James R.

2002-01-01

The subtropical gyres of the world are extensive, coherent regions that occupy about 40% of the surface of the earth. Once thought to be homogeneous and static habitats, there is increasing evidence that mid-latitude gyres exhibit substantial physical and biological variability on a variety of time scales. While biological productivity within these oligotrophic regions may be relatively small, their immense size makes their total contribution significant. Global distributions of dynamic height derived from satellite altimeter data, and chlorophyll concentration derived from satellite ocean color data, show that the dynamic center of the gyres, the region of maximum dynamic height where the thermocline is deepest, does not coincide with the region of minimum chlorophyll concentration. The physical and biological processes by which this distribution of ocean properties is maintained, and the spatial and temporal scales of variability associated with these processes, are analyzed using global surface chlorophyll-a concentrations, sea surface height, sea surface temperature and surface winds from operational satellite and meteorological sources, and hydrographic data from climatologies and individual surveys. Seasonal and interannual variability in the areal extent of the subtropical gyres are examined using 8 months (November 1996 - June 1997) of OCTS and nearly 5 years (September 1997 - June 02) of SeaWiFS ocean color data and are interpreted in the context of climate variability and measured changes in other ocean properties (i.e., wind forcing, surface currents, Ekman pumping, and vertical mixing). The North Pacific and North Atlantic gyres are observed to be shrinking over this period, while the South Pacific, South Atlantic, and South Indian Ocean gyres appear to be expanding.

Allocation of Secondary Metabolites, Photosynthetic Capacity, and Antioxidant Activity of Kacip Fatimah (Labisia pumila Benth) in Response to CO2 and Light Intensity

PubMed Central

Jaafar, Hawa Z. E.; Karimi, Ehsan; Ghasemzadeh, Ali

2014-01-01

A split plot 3 by 4 experiment was designed to investigate and distinguish the relationships among production of secondary metabolites, soluble sugar, phenylalanine ammonia lyase (PAL; EC 4.3.1.5) activity, leaf gas exchange, chlorophyll content, antioxidant activity (DPPH), and lipid peroxidation under three levels of CO2 (400, 800, and 1200 μmol/mol) and four levels of light intensity (225, 500, 625, and 900 μmol/m2/s) over 15 weeks in Labisia pumila. The production of plant secondary metabolites, sugar, chlorophyll content, antioxidant activity, and malondialdehyde content was influenced by the interactions between CO2 and irradiance. The highest accumulation of secondary metabolites, sugar, maliondialdehyde, and DPPH activity was observed under CO2 at 1200 μmol/mol + light intensity at 225 μmol/m2/s. Meanwhile, at 400 μmol/mol CO2 + 900 μmol/m2/s light intensity the production of chlorophyll and maliondialdehyde content was the highest. As CO2 levels increased from 400 to 1200 μmol/mol the photosynthesis, stomatal conductance, f v/f m (maximum efficiency of photosystem II), and PAL activity were enhanced. The production of secondary metabolites displayed a significant negative relationship with maliondialdehyde indicating lowered oxidative stress under high CO2 and low irradiance improved the production of plant secondary metabolites that simultaneously enhanced the antioxidant activity (DPPH), thus improving the medicinal value of Labisia pumila under this condition. PMID:24683336

Pigment production in Spirulina fussiformis in different photophysical conditions.

PubMed

Madhyastha, H K; Vatsala, T M

2007-09-01

The present investigation makes a comparative investigation of individual light source on the different commercially important pigments in Spirulina fussiformis in photobioreactor culture condition. Continuous culture system was carried out throughout the experimental condition. Initially, seed culture, corresponding to 0.2 g/L on dry weight basis was cultivated in Zarrouks medium with different colored light source in reactor. Maximum daily biomass productivity, 0.8 g/L, 0.75 g/L and 0.69 g/L in white light (WL), blue light (BL) and green light (GL), respectively, conditions was noticed. Pigment content during WL treatment showed the highest accumulation (5.5 microg/mL) of chlorophyll whereas, other pigments roughly remained constant without much change, implying WL intensity is better for chlorophyll synthesis. On the other hand, chlorophyll and phycocyanin content gradually increased up to 7 microg/mL and 2 mg/mL, respectively, at BL intensity. The response to GL was negative to all pigments studied except for phycocyanin; in this case a highest production (2.5 mg/mL) was seen during 18 days experimental period. Additionally, when yellow light (YL) treatment experiments were conducted, the rate of production gradually decreased from 6th day onward in all pigments demonstrating the photobleaching effect of YL. The average rate of pigments production did not show significant accumulation in red light (RL) light treatment except phycoerythrin which showed an increasing trend of production. It is worth to mention here that higher light intensity is better for production of phycocyanin and phycoerythrin in Spirulina.

On the relationship between satellite-retrieved surface temperature fronts and chlorophyll a in the western South Atlantic

NASA Astrophysics Data System (ADS)

Saraceno, Martin; Provost, Christine; Piola, Alberto R.

2005-11-01

The time-space distribution of chlorophyll a in the southwestern Atlantic is examined using 6 years (1998-2003) of sea surface color images from Sea-viewing Wide Field of View Sensor (SeaWiFS). Chlorophyll a (chl a) distribution is confronted with sea surface temperature (SST) fronts retrieved from satellite imagery. Histogram analysis of the color, SST, and SST gradient data sets provides a simple procedure for pixel classification from which eight biophysical regions in the SWA are identified, including three new regions with regard to Longhurst (1998) work: Patagonian Shelf Break (PSB), Brazil Current Overshoot, and Zapiola Rise region. In the PSB region, coastal-trapped waves are suggested as a possible mechanism leading to the intraseasonal frequencies observed in SST and chl a. Mesoscale activity associated with the Brazil Current Front and, in particular, eddies drifting southward is probably responsible for the high chl a values observed throughout the Brazil Current Overshoot region. The Zapiola Rise is characterized by a local minimum in SST gradient magnitudes and shows chl a maximum values in February, 3 months later than the austral spring bloom of the surroundings. Significant interannual variability is present in the color imagery. In the PSB, springs and summers with high chl a concentrations seem associated with stronger local northerly wind speed, and possible mechanisms are discussed. Finally, the Brazil-Malvinas front is detected using both SST gradient and SeaWiFS images. The time-averaged position of the front at 54.2°W is estimated at 38.9°S and its alongshore migration of about 300 km.

Chlorophyll metabolism in pollinated vs. parthenocarpic fig fruits throughout development and ripening.

PubMed

Rosianskey, Yogev; Dahan, Yardena; Yadav, Sharawan; Freiman, Zohar E; Milo-Cochavi, Shira; Kerem, Zohar; Eyal, Yoram; Flaishman, Moshe A

2016-08-01

Expression of 13 genes encoding chlorophyll biosynthesis and degradation was evaluated. Chlorophyll degradation was differentially regulated in pollinated and parthenocarpic fig fruits, leading to earlier chlorophyll degradation in parthenocarpic fruits. Varieties of the common fig typically yield a commercial summer crop that requires no pollination, although it can be pollinated. Fig fruit pollination results in larger fruit size, greener skin and darker interior inflorescence color, and slows the ripening process compared to non-pollinated fruits. We evaluated the effect of pollination on chlorophyll content and levels of transcripts encoding enzymes of the chlorophyll metabolism in fruits of the common fig 'Brown Turkey'. We cloned and evaluated the expression of 13 different genes. All 13 genes showed high expression in the fruit skin, inflorescences and leaves, but extremely low expression in roots. Pollination delayed chlorophyll breakdown in the ripening fruit skin and inflorescences. This was correlated with the expression of genes encoding enzymes in the chlorophyll biosynthesis and degradation pathways. Expression of pheophorbide a oxygenase (PAO) was strongly negatively correlated with chlorophyll levels during ripening in pollinated fruits; along with its high expression levels in yellow leaves, this supports a pivotal role for PAO in chlorophyll degradation in figs. Normalizing expression levels of all chlorophyll metabolism genes in the pollinated and parthenocarpic fruit skin and inflorescences showed three synthesis (FcGluTR1, FcGluTR2 and FcCLS1) and three degradation (FcCLH1, FcCLH2 and FcRCCR1) genes with different temporal expression in the pollinated vs. parthenocarpic fruit skin and inflorescences. FcCAO also showed different expressions in the parthenocarpic fruit skin. Thus, chlorophyll degradation is differentially regulated in the pollinated and parthenocarpic fruit skin and inflorescences, leading to earlier and more sustained chlorophyll degradation in the parthenocarpic fruit.

Fine scale bio-physical oceanographic characteristics predict the foraging occurrence of contrasting seabird species; Gannet (Morus bassanus) and storm petrel (Hydrobates pelagicus)

NASA Astrophysics Data System (ADS)

Scott, B. E.; Webb, A.; Palmer, M. R.; Embling, C. B.; Sharples, J.

2013-10-01

As we begin to manage our oceans in much more spatial detail we must understand a great deal more about oceanographic habitat preferences of marine mobile top predators. In this unique field study we test a hypothesis on the mechanisms defining mobile predator foraging habitat characteristics by comparing temporally and spatially detailed bio-physical oceanographic data from contrasting topographical locations. We contrast the foraging locations of two very different seabird species, gannets and storm petrels, by repeatedly sampling a bank and a nearby flat area over daily tidal cycles during spring and neap tides. The results suggest that storm petrels are linked to foraging in specific locations where internal waves are produced, which is mainly on banks. These locations can also include the presence of high biomass of chlorophyll. In contrast, the location where more gannets are foraging is significantly influenced by temporal variables with higher densities of foraging birds much more likely during the neap tide than times of spring tide. The foraging times of both species was influenced by differences between the vertical layers of the water column above and below the thermocline; via either vertical shear of horizontal currents or absolute differences in speed between layers. Higher densities of foraging gannets were significantly more likely to be found at ebb tides in both bank and flat regions however over the bank, the density of foraging gannets was higher when the differences in speed between the layers were at a maximum. Both gannets and storm petrels appear to be more likely to forage when wind direction is opposed to tidal direction. This detailed understanding links foraging behaviour to predictable spatial and temporal bio-physical vertical characteristics and thus can be immediately used to explain variance and increase certainty in past abundance and distributional surveys. These results also illuminate the types of variables that should be considered when assessing potential changes to the distribution and characteristics of habitats from increased anthropogenic disturbances such as large scale offshore wind, wave and tidal renewable deployments.

Surface layer and bloom dynamics observed with the Prince William Sound Autonomous Profiler

NASA Astrophysics Data System (ADS)

Campbell, R. W.

2016-02-01

As part of a recent long term monitoring effort, deployments of a WETLabs Autonomous Moored Profiler (AMP) began Prince William Sound (PWS) in 2013. The PWS AMP consists of a positively buoyant instrument frame, with a winch and associated electronics that profiles the frame from a park depth (usually 55 m) to the surface by releasing and retrieving a thin UHMWPE tether; it generally conducts a daily cast and measures temperature, salinity, chlorophyll-a fluorescence, turbidity, and oxygen and nitrate concentrations. Upward and downward looking ADCPs are mounted on a float below the profiler, and an in situ plankton imager is in development and will be installed in 2016. Autonomous profilers are a relatively new technology, and early deployments experienced a number of failures from which valuable lessons may be learned. Nevertheless, an unprecedented time series of the seasonal biogeochemical procession in the surface waters coastal Gulf of Alaska was collected in 2014 and 2015. The northern Gulf of Alaska has experienced a widespread warm anomaly since early 2014, and surface layer temperature anomalies in PWS were strongly positive during winter 2014. The spring bloom observed by the profiler began 2-3 weeks earlier than average, with surface nitrate depleted by late April. Although surface temperatures were still above average in 2015, bloom timing was much later, with a short vigorous bloom in late April and a subsurface bloom in late May that coincided with significant nitrate drawdown. As well as the vernal blooms, wind-driven upwelling events lead to several small productivity pulses that were evident in changes in nitrate and oxygen concentrations, and chlorophyll-a fluorescence. As well as providing a mechanistic understanding of surface layer biogeochemistry, high frequency observations such as these put historical observations in context, and provide new insights into the scales of variability in the annual cycles of the surface ocean in the North Pacific.

Observing Physical and Biological Drivers of pH and O2 in a Seasonal Ice Zone in the Ross Sea Using Profiling Float Data

NASA Astrophysics Data System (ADS)

Briggs, E.; Martz, T. R.; Talley, L. D.; Mazloff, M. R.

2015-12-01

Ice cover has strong influence over gas exchange, vertical stability, and biological production which are critical to understanding the Southern Ocean's central role in oceanic biogeochemical cycling and heat and carbon uptake under a changing climate. However the relative influence of physical versus biological processes in this hard-to-study region is poorly understood due to limited observations. Here we present new findings from a profiling float equipped with biogeochemical sensors in the seasonal ice zone of the Ross Sea capturing, for the first time, under-ice pH profile data over a two year timespan from 2014 to the present. The relative influence of physical (e.g. vertical mixing and air-sea gas exchange) and biological (e.g. production and respiration) drivers of pH and O2 within the mixed layer are explored during the phases of ice formation, ice cover, and ice melt over the two seasonal cycles. During the austral fall just prior to and during ice formation, O2 increases as expected due to surface-layer undersaturation and enhanced gas exchange. A small increase in pH is also observed during this phase, but without a biological signal in accompanying profiling float chlorophyll data, which goes against common reasoning from both a biological and physical standpoint. During the phase of ice cover, gas exchange is inhibited and a clear respiration signal is observed in pH and O2 data from which respiration rates are calculated. In the austral spring, ice melt gives rise to substantial ice edge phytoplankton blooms indicated by O2 supersaturation and corresponding increase in pH and large chlorophyll signal. The influence of the duration of ice cover and mixed layer depth on the magnitude of the ice edge blooms is explored between the two seasonal cycles.

Spring phytoplankton communities of the Labrador Sea (2005-2014): pigment signatures, photophysiology and elemental ratios

NASA Astrophysics Data System (ADS)

Fragoso, Glaucia M.; Poulton, Alex J.; Yashayaev, Igor M.; Head, Erica J. H.; Purdie, Duncan A.

2017-03-01

The Labrador Sea is an ideal region to study the biogeographical, physiological, and biogeochemical implications of phytoplankton community composition due to sharp transitions between distinct water masses across its shelves and central basin. We have investigated the multi-year (2005-2014) distributions of late spring and early summer (May to June) phytoplankton communities in the various hydrographic settings of the Labrador Sea. Our analysis is based on pigment markers (using CHEMTAX analysis), and photophysiological and biogeochemical characteristics associated with each phytoplankton community. Diatoms were the most abundant group, blooming first in shallow mixed layers of haline-stratified Arctic shelf waters. Along with diatoms, chlorophytes co-dominated at the western end of the section (particularly in the polar waters of the Labrador Current (LC)), whilst Phaeocystis co-dominated in the east (modified polar waters of the West Greenland Current (WGC)). Pre-bloom conditions occurred in deeper mixed layers of the central Labrador Sea in May, where a mixed assemblage of flagellates (dinoflagellates, prasinophytes, prymnesiophytes, particularly coccolithophores, and chrysophytes/pelagophytes) occurred in low-chlorophyll areas, succeeding to blooms of diatoms and dinoflagellates in thermally stratified Atlantic waters in June. Light-saturated photosynthetic rates and saturation irradiance levels were highest at stations where diatoms were the dominant phytoplankton group ( > 70 % of total chlorophyll a), as opposed to stations where flagellates were more abundant (from 40 up to 70 % of total chlorophyll a). Phytoplankton communities from the WGC (Phaeocystis and diatoms) had lower light-limited photosynthetic rates, with little evidence of photoinhibition, indicating greater tolerance to a high light environment. By contrast, communities from the central Labrador Sea (dinoflagellates and diatoms), which bloomed later in the season (June), appeared to be more sensitive to high light levels. Ratios of accessory pigments (AP) to total chlorophyll a (TChl a) varied according to phytoplankton community composition, with polar phytoplankton (cold-water related) having lower AP : TChl a. Polar waters (LC and WGC) also had higher and more variable particulate organic carbon (POC) to particulate organic nitrogen (PON) ratios, suggesting the influence of detritus from freshwater input, derived from riverine, glacial, and/or sea ice meltwater. Long-term observational shifts in phytoplankton communities were not assessed in this study due to the short temporal frame (May to June) of the data. Nevertheless, these results add to our current understanding of phytoplankton group distribution, as well as an evaluation of the biogeochemical role (in terms of C : N ratios) of spring phytoplankton communities in the Labrador Sea, which will assist our understanding of potential long-term responses of phytoplankton communities in high-latitude oceans to a changing climate.

Biosynthesis of Chlorophyll a in a Purple Bacterial Phototroph and Assembly into a Plant Chlorophyll-Protein Complex.

PubMed

Hitchcock, Andrew; Jackson, Philip J; Chidgey, Jack W; Dickman, Mark J; Hunter, C Neil; Canniffe, Daniel P

2016-09-16

Improvements to photosynthetic efficiency could be achieved by manipulating pigment biosynthetic pathways of photosynthetic organisms in order to increase the spectral coverage for light absorption. The development of organisms that can produce both bacteriochlorophylls and chlorophylls is one way to achieve this aim, and accordingly we have engineered the bacteriochlorophyll-utilizing anoxygenic phototroph Rhodobacter sphaeroides to make chlorophyll a. Bacteriochlorophyll and chlorophyll share a common biosynthetic pathway up to the precursor chlorophyllide. Deletion of genes responsible for the bacteriochlorophyll-specific modifications of chlorophyllide and replacement of the native bacteriochlorophyll synthase with a cyanobacterial chlorophyll synthase resulted in the production of chlorophyll a. This pigment could be assembled in vivo into the plant water-soluble chlorophyll protein, heterologously produced in Rhodobacter sphaeroides, which represents a proof-of-principle for the engineering of novel antenna complexes that enhance the spectral range of photosynthesis.

Pulse amplitude modulated chlorophyll fluorometer

DOEpatents

Greenbaum, Elias; Wu, Jie

2015-12-29

Chlorophyll fluorometry may be used for detecting toxins in a sample because of changes in micro algae. A portable lab on a chip ("LOAC") based chlorophyll fluorometer may be used for toxin detection and environmental monitoring. In particular, the system may include a microfluidic pulse amplitude modulated ("PAM") chlorophyll fluorometer. The LOAC PAM chlorophyll fluorometer may analyze microalgae and cyanobacteria that grow naturally in source drinking water.

Revisiting chlorophyll extraction methods in biological soil crusts - methodology for determination of chlorophyll a and chlorophyll a + b as compared to previous methods

NASA Astrophysics Data System (ADS)

Caesar, Jennifer; Tamm, Alexandra; Ruckteschler, Nina; Lena Leifke, Anna; Weber, Bettina

2018-03-01

Chlorophyll concentrations of biological soil crust (biocrust) samples are commonly determined to quantify the relevance of photosynthetically active organisms within these surface soil communities. Whereas chlorophyll extraction methods for freshwater algae and leaf tissues of vascular plants are well established, there is still some uncertainty regarding the optimal extraction method for biocrusts, where organism composition is highly variable and samples comprise major amounts of soil. In this study we analyzed the efficiency of two different chlorophyll extraction solvents, the effect of grinding the soil samples prior to the extraction procedure, and the impact of shaking as an intermediate step during extraction. The analyses were conducted on four different types of biocrusts. Our results show that for all biocrust types chlorophyll contents obtained with ethanol were significantly lower than those obtained using dimethyl sulfoxide (DMSO) as a solvent. Grinding of biocrust samples prior to analysis caused a highly significant decrease in chlorophyll content for green algal lichen- and cyanolichen-dominated biocrusts, and a tendency towards lower values for moss- and algae-dominated biocrusts. Shaking of the samples after each extraction step had a significant positive effect on the chlorophyll content of green algal lichen- and cyanolichen-dominated biocrusts. Based on our results we confirm a DMSO-based chlorophyll extraction method without grinding pretreatment and suggest the addition of an intermediate shaking step for complete chlorophyll extraction (see Supplement S6 for detailed manual). Determination of a universal chlorophyll extraction method for biocrusts is essential for the inter-comparability of publications conducted across all continents.

Observations of Ocean Primary Productivity Using MODIS

NASA Technical Reports Server (NTRS)

Esaias, Wayne E.; Abbott, Mark R.; Koblinsky, Chester J. (Technical Monitor)

2001-01-01

Measuring the magnitude and variability of oceanic net primary productivity (NPP) represents a key advancement toward our understanding of the dynamics of marine ecosystems and the role of the ocean in the global carbon cycle. MODIS observations make two new contributions in addition to continuing the bio-optical time series begun with Orbview-2's SeaWiFS sensor. First, MODIS provides weekly estimates of global ocean net primary productivity on weekly and annual time periods, and annual empirical estimates of carbon export production. Second, MODIS provides additional insight into the spatial and temporal variations in photosynthetic efficiency through the direct measurements of solar-stimulated chlorophyll fluorescence. The two different weekly productivity indexes (first developed by Behrenfeld & Falkowski and by Yoder, Ryan and Howard) are used to derive daily productivity as a function of chlorophyll biomass, incident daily surface irradiance, temperature, euphotic depth, and mixed layer depth. Comparisons between these two estimates using both SeaWiFS and MODIS data show significant model differences in spatial distribution after allowance for the different integration depths. Both estimates are strongly dependence on the accuracy of the chlorophyll determination. In addition, an empirical approach is taken on annual scales to estimate global NPP and export production. Estimates of solar stimulated fluorescence efficiency from chlorophyll have been shown to be inversely related to photosynthetic efficiency by Abbott and co-workers. MODIS provides the first global estimates of oceanic chlorophyll fluorescence, providing an important proof of concept. MODIS observations are revealing spatial patterns of fluorescence efficiency which show expected variations with phytoplankton photo-physiological parameters as measured during in-situ surveys. This has opened the way for research into utilizing this information to improve our understanding of oceanic NPP variability. Deriving the ocean bio-optical properties places severe demands on instrument performance (especially band to band precision) and atmospheric correction. Improvements in MODIS instrument characterization and calibration over the first 16 mission months have greatly improved the accuracy of the chlorophyll input fields and FLH, and therefore the estimates of NPP and fluorescence efficiency. Annual estimates now show the oceanic NPP accounts for 40-50% of the global total NPP, with significant interannual variations related to large scale ocean processes. Spatial variations in ocean NPP, and exported production, have significant effects on exchange of CO2 between the ocean and atmosphere. Further work is underway to improve both the primary productivity model functions, and to refine our understanding of the relationships between fluorescence efficiency and NPP estimates. We expect that the MODIS instruments will prove extremely useful in assessing the time dependencies of oceanic carbon uptake and effects of iron enrichment, within the global carbon cycle.

Indirect suppression of photosynthesis on individual leaves by arthropod herbivory

PubMed Central

Nabity, Paul D.; Zavala, Jorge A.; DeLucia, Evan H.

2009-01-01

Background Herbivory reduces leaf area, disrupts the function of leaves, and ultimately alters yield and productivity. Herbivore damage to foliage typically is assessed in the field by measuring the amount of leaf tissue removed and disrupted. This approach assumes the remaining tissues are unaltered, and plant photosynthesis and water balance function normally. However, recent application of thermal and fluorescent imaging technologies revealed that alterations to photosynthesis and transpiration propagate into remaining undamaged leaf tissue. Scope and Conclusions This review briefly examines the indirect effects of herbivory on photosynthesis, measured by gas exchange or chlorophyll fluorescence, and identifies four mechanisms contributing to the indirect suppression of photosynthesis in remaining leaf tissues: severed vasculature, altered sink demand, defence-induced autotoxicity, and defence-induced down-regulation of photosynthesis. We review the chlorophyll fluorescence and thermal imaging techniques used to gather layers of spatial data and discuss methods for compiling these layers to achieve greater insight into mechanisms contributing to the indirect suppression of photosynthesis. We also elaborate on a few herbivore-induced gene-regulating mechanisms which modulate photosynthesis and discuss the difficult nature of measuring spatial heterogeneity when combining fluorescence imaging and gas exchange technology. Although few studies have characterized herbivore-induced indirect effects on photosynthesis at the leaf level, an emerging literature suggests that the loss of photosynthetic capacity following herbivory may be greater than direct loss of photosynthetic tissues. Depending on the damage guild, ignoring the indirect suppression of photosynthesis by arthropods and other organisms may lead to an underestimate of their physiological and ecological impacts. PMID:18660492

Seasonal change of phytoplankton (spring vs. summer) in the southern Patagonian shelf

NASA Astrophysics Data System (ADS)

Gonçalves-Araujo, Rafael; de Souza, Márcio Silva; Mendes, Carlos Rafael Borges; Tavano, Virginia Maria; Garcia, Carlos A. E.

2016-08-01

As part of the Patagonian Experiment (PATEX) project two sequential seasons (spring/summer 2007-2008) were sampled in the southern Patagonian shelf, when physical-chemical-biological (phytoplankton) data were collected. Phytoplankton biomass and community composition were assessed through both microscopic and high-performance liquid chromatography/chemical taxonomy (HPLC/CHEMTAX) techniques and related to both in situ and satellite data at spatial and seasonal scales. Phytoplankton seasonal variation was clearly modulated by water column thermohaline structure and nutrient dynamics [mainly dissolved inorganic nitrogen (DIN) and silicate]. The spring phytoplankton community showed elevated biomass and was dominated by diatoms [mainly Corethron pennatum and small (<20 μm) cells of Thalassiosira spp.], associated with a deeper and more weakly stratified upper mixed layer depth (UMLD) and relatively low nutrient concentrations, which were probably a result of consumption by the diatom bloom. In contrast, the phytoplankton community in summer presented lower biomass and was mainly dominated by haptophytes (primarily Emiliania huxleyi and Phaeocystis antarctica) and dinoflagellates, associated with shallower and well-stratified upper mixed layers with higher nutrient concentrations, likely due to lateral advection of nutrient-rich waters from the Malvinas Current. The gradual establishment of a strongly stratified and shallow UMLD as season progressed, was an important factor leading to the replacement of the spring diatom community by a dominance of calcifying organisms, as shown in remote sensing imagery and confirmed by microscopic examination. Furthermore, in spring, phaeopigments a (degradation products of chlorophyll a) relative to chlorophyll a, were twice that of summer, indicating the diatom bloom was under higher grazing pressure.

Microbial community diversity of the eastern Atlantic Ocean reveals geographic differences

NASA Astrophysics Data System (ADS)

Friedline, C. J.; Franklin, R. B.; McCallister, S. L.; Rivera, M. C.

2012-01-01

Prokaryotic communities are recognized as major drivers of the biogeochemical processes in the oceans. However, the genetic diversity and composition of those communities is poorly understood. The aim of this study was to investigate the eubacterial communities in three different water layers: surface (2-20 m), deep chlorophyll maximum (DCM; 28-90 m), and deep (100-4600 m) at nine stations along the eastern Atlantic Ocean from 42.8° N to 23.7° S. In order to describe the dynamics of the eubacterial assemblages in relation to depth, associated environmental properties, and Longhurstian ecological provinces community DNA was extracted from 16 samples, from which the V6 region of 16s rDNA was PCR-amplified with eubacteria-specific primers, and the PCR amplicons were pyrosequenced. A total of 352 029 sequences were generated; after quality filtering and processing, 257 260 sequences were clustered into 2871 normalized Operational Taxonomic Units (OTU) using a definition of 97% sequence identity. Comparisons of the phylogenetic affiliation of those 2871 OTUs show more than 54% of them were assigned to the Proteobacteria, with the Alphaproteobacteria representing 4% of the total Proteobacteria OTUs, and the Gammaproteobacteria representing 22%. Within the Alphaproteobacteria-affiliated OTUs, 44% of the OTUs were associated with the ubiquitous SAR11 clade. The phylum Cyanobacteria represent 10% of the reads, with the majority of those reads among the GpIIa family including Prochlorococcus and Synechococcus. Among the Gammaproteobacteria, a single OTU affiliated to Alteromonas comprises ~3% of the abundance. The phyla Bacteroidetes, Verrucomicrobia, Actinobacteria, and Firmicutes represent approximately 7%, 0.8%, 2%, and 0.05% of the read abundance, respectively. Community ecology statistical analyses and a novel implementation of Bayesian inference suggests that eastern Atlantic Ocean eubacterial assemblages are vertically stratified and associated with water layers characterized by unique environmental signals (e.g., temperature, salinity, and nutrients). Genetic composition of eubacterial communities from the same water layer are more similar to each other than to the communities from different water layers. Moreover, within the same water layer the separation of the communities appears to show a significant distance effect. Surface eubacterial communities displayed a general congruency with the ecological provinces defined by Longhurst with exceptions usually associated with unique hydrographic and biogeochemical features. Collectively, our findings suggest that a vertical and latitudinal biogeographical signature is present in the studied communities and that both environmental parameters and ecological provinces are drivers of eubacterial assemblages in the eastern Atlantic Ocean.

Characteristic sediment and water column chlorophyll-a in the sea cucumber’s Paracaudina sp. habitat on the Kenjeran Water, Surabaya

NASA Astrophysics Data System (ADS)

Widianingsih, W.; Zaenuri, M.; Anggoro, S.; Kusumaningrum, H. P.; Hartati, R.

2018-03-01

The study of characteristic sediment and water column chlorophyll-a has an important role in the sea cucumber habitat. Sediment chlorophyll-a represents a productivity primer for the benthic community. This research has a purpose to investigate characteristic sediment and water column chlorophyll-a on the Kenjeran water, Surabaya. Sediment samples were collected by the ekman grab for analysis, grain size and nutrient. The sample for sediment chlorophyll-a was taken by core sampler. The water samples were taken with Nansen Bottles. According to the research result, the values of sediment chlorophyll-a at station 10, 11 and 12 were higher than the other stations. In contrast, the value of chlorophyll-a in the column water had almost the same value for each station. The sediment chlorophyll-a value on clay and silt sediment type was higher than the fine sand and coarse sediment type. The suitable habitat characteristic for Paracaudina sp. was clay and silt sediment with sediment chlorophyll concentration ranging from 347.82 mg·m-2 to 1135.52 mg·m-2.

AVIRIS spectra of California wetlands

NASA Technical Reports Server (NTRS)

Gross, Michael F.; Ustin, Susan L.; Klemas, Vytautas

1988-01-01

Spectral data gathered by the AVIRIS from wetlands in the Suisun Bay area of California on 13 October 1987 were analyzed. Spectra representing stands of numerous vegetation types (including Sesuvium verrucosum, Scirpus acutus and Scirpus californicus, Xanthium strumarium, Cynadon dactylon, and Distichlis spicata) and soil were isolated. Despite some defects in the data, it was possible to detect vegetation features such as differences in the location of the chlorophyll red absorption maximum. Also, differences in cover type spectra were evident in other spectral regions. It was not possible to determine if the observed features represent noise, variability in canopy architecture, or chemical constituents of leaves.

Mechanisms behind the estimation of photosynthesis traits from leaf reflectance observations

NASA Astrophysics Data System (ADS)

Dechant, Benjamin; Cuntz, Matthias; Doktor, Daniel; Vohland, Michael

2016-04-01

Many studies have investigated the reflectance-based estimation of leaf chlorophyll, water and dry matter contents of plants. Only few studies focused on photosynthesis traits, however. The maximum potential uptake of carbon dioxide under given environmental conditions is determined mainly by RuBisCO activity, limiting carboxylation, or the speed of photosynthetic electron transport. These two main limitations are represented by the maximum carboxylation capacity, V cmax,25, and the maximum electron transport rate, Jmax,25. These traits were estimated from leaf reflectance before but the mechanisms underlying the estimation remain rather speculative. The aim of this study was therefore to reveal the mechanisms behind reflectance-based estimation of V cmax,25 and Jmax,25. Leaf reflectance, photosynthetic response curves as well as nitrogen content per area, Narea, and leaf mass per area, LMA, were measured on 37 deciduous tree species. V cmax,25 and Jmax,25 were determined from the response curves. Partial Least Squares (PLS) regression models for the two photosynthesis traits V cmax,25 and Jmax,25 as well as Narea and LMA were studied using a cross-validation approach. Analyses of linear regression models based on Narea and other leaf traits estimated via PROSPECT inversion, PLS regression coefficients and model residuals were conducted in order to reveal the mechanisms behind the reflectance-based estimation. We found that V cmax,25 and Jmax,25 can be estimated from leaf reflectance with good to moderate accuracy for a large number of species and different light conditions. The dominant mechanism behind the estimations was the strong relationship between photosynthesis traits and leaf nitrogen content. This was concluded from very strong relationships between PLS regression coefficients, the model residuals as well as the prediction performance of Narea- based linear regression models compared to PLS regression models. While the PLS regression model for V cmax,25 was fully based on the correlation to Narea, the PLS regression model for Jmax,25 was not entirely based on it. Analyses of the contributions of different parts of the reflectance spectrum revealed that the information contributing to the Jmax,25 PLS regression model in addition to the main source of information, Narea, was mainly located in the visible part of the spectrum (500-900 nm). Estimated chlorophyll content could be excluded as potential source of this extra information. The PLS regression coefficients of the Jmax,25 model indicated possible contributions from chlorophyll fluorescence and cytochrome f content. In summary, we found that the main mechanism behind the estimation of V cmax,25 and Jmax,25 from leaf reflectance observations is the correlation to Narea but that there is additional information related to Jmax,25 mainly in the visible part of the spectrum.

Carbon: Chlorophyll Ratios and Net Primary Productivity of Subarctic Pacific Surface Waters Derived From Autonomous Shipboard Sensors

NASA Astrophysics Data System (ADS)

Burt, William J.; Westberry, Toby K.; Behrenfeld, Michael J.; Zeng, Chen; Izett, Robert W.; Tortell, Philippe D.

2018-02-01

We present optically derived estimates of phytoplankton carbon (Cphyto) and chlorophyll a concentration (Chl) across a wide range of productivity and hydrographic regimes in the Subarctic Pacific Ocean. Our high-frequency measurements capture changes in Cphyto and Chl across regional gradients in macronutrient and micronutrient limitations and submesoscale hydrographic frontal zones. Throughout the majority of our survey region, carbon to chlorophyll ratios (Cphyto:Chl) ranged between 50 and 100. Lower values (10-20) were constrained to the highly productive coastal upwelling system along Vancouver Island, whereas higher estimated values (>200) were found directly off the southern British Columbia continental shelf. Further offshore, Cphyto:Chl was less variable, ranging from 50 to 80 in high nutrient low Chl waters in June and from 80 to 120 in the Gulf of Alaska in July. Much of the variability in Cphyto:Chl throughout the study region could be explained by mixed-layer light levels (i.e., photoacclimation), with additional variability attributed to nutrient-controlled changes in phytoplankton growth rates in some regions. Elevated Cphyto:Chl ratios resulting from apparent nutrient stress were found in areas of low macronutrient concentrations. In contrast, iron-limited waters exhibited Cphyto:Chl ratios lower than predicted from the photoacclimation model. Applying the carbon-based production model, we derived Cphyto and Chl-based estimates of net primary productivity, which showed good coherence with independent 14C uptake measurements. Our results highlight the utility of ship-board optical data to examine phytoplankton physiological ecology and productivity in surface marine waters.

Spatial statistics of hydrography and water chemistry in a eutrophic boreal lake based on sounding and water samples.

PubMed

Leppäranta, Matti; Lewis, John E; Heini, Anniina; Arvola, Lauri

2018-06-04

Spatial variability, an essential characteristic of lake ecosystems, has often been neglected in field research and monitoring. In this study, we apply spatial statistical methods for the key physics and chemistry variables and chlorophyll a over eight sampling dates in two consecutive years in a large (area 103 km 2 ) eutrophic boreal lake in southern Finland. In the four summer sampling dates, the water body was vertically and horizontally heterogenic except with color and DOC, in the two winter ice-covered dates DO was vertically stratified, while in the two autumn dates, no significant spatial differences in any of the measured variables were found. Chlorophyll a concentration was one order of magnitude lower under the ice cover than in open water. The Moran statistic for spatial correlation was significant for chlorophyll a and NO 2 +NO 3 -N in all summer situations and for dissolved oxygen and pH in three cases. In summer, the mass centers of the chemicals were within 1.5 km from the geometric center of the lake, and the 2nd moment radius ranged in 3.7-4.1 km respective to 3.9 km for the homogeneous situation. The lateral length scales of the studied variables were 1.5-2.5 km, about 1 km longer in the surface layer. The detected spatial "noise" strongly suggests that besides vertical variation also the horizontal variation in eutrophic lakes, in particular, should be considered when the ecosystems are monitored.

Assessing the Variability in the Relationship Between the Particulate Backscattering Coefficient and the Chlorophyll a Concentration From a Global Biogeochemical-Argo Database

NASA Astrophysics Data System (ADS)

Barbieux, Marie; Uitz, Julia; Bricaud, Annick; Organelli, Emanuele; Poteau, Antoine; Schmechtig, Catherine; Gentili, Bernard; Obolensky, Grigor; Leymarie, Edouard; Penkerc'h, Christophe; D'Ortenzio, Fabrizio; Claustre, Hervé

2018-02-01

Characterizing phytoplankton distribution and dynamics in the world's open oceans requires in situ observations over a broad range of space and time scales. In addition to temperature/salinity measurements, Biogeochemical-Argo (BGC-Argo) profiling floats are capable of autonomously observing at high-frequency bio-optical properties such as the chlorophyll fluorescence, a proxy of the chlorophyll a concentration (Chla), the particulate backscattering coefficient (bbp), a proxy of the stock of particulate organic carbon, and the light available for photosynthesis. We analyzed an unprecedented BGC-Argo database of more than 8,500 multivariable profiles collected in various oceanic conditions, from subpolar waters to subtropical gyres. Our objective is to refine previously established Chla versus bbp relationships and gain insights into the sources of vertical, seasonal, and regional variability in this relationship. Despite some regional, seasonal and vertical variations, a general covariation occurs at a global scale. We distinguish two main contrasted situations: (1) concomitant changes in Chla and bbp that correspond to actual variations in phytoplankton biomass, e.g., in subpolar regimes; (2) a decoupling between the two variables attributed to photoacclimation or changes in the relative abundance of nonalgal particles, e.g., in subtropical regimes. The variability in the bbp:Chla ratio in the surface layer appears to be essentially influenced by the type of particles and by photoacclimation processes. The large BGC-Argo database helps identifying the spatial and temporal scales at which this ratio is predominantly driven by one or the other of these two factors.

Harnessing Solar Energy Using Photosynthetic and Organic Pigments

NASA Astrophysics Data System (ADS)

Fitzsimons, Toby Ryan

Fossil fuels are a finite energy resource that must be supplemented or replaced by more stable forms of electrical energy. Solar technology research strives to supplement and provide eventual replacement for fossil fuel technology. This experiment focused on the use of natural pigments as photo-sensitizers in the current generation of solar cells called dye sensitized solar cells (DSSCs). Pigments from purified chlorophyll a, chlorophyll b, chlorophyll a/b, crude spinach (Spinacia oleracea) extract, phycocyanin, and chlorophyllin were used to construct DSSCs and evaluated, along with a control containing no pigment, for solar energy conversion. The anode of the solar cells consisted of titanium dioxide (TiO2) plates soaked in pigment solutions for twenty-four hours. The plates were assembled, along with an electrolyte sandwiched between cells, and a platinum-coated counter plate that functioned as the cathode. A gasket seal was placed between the plates and held together with rubber bands. The DSSCs were each tested for a maximum power (Pmax) point and a resistor was selected that corresponded to the resistance at that point. The cells were randomly placed into a power block assembly located in an environmental chamber with lighting that provided an average of 27,590 lumens at the surface of DSSCs. With appropriate resistors in place, the cells were subjected to twelve-hour days and twelve-hour nights for ten days, and measurements were recorded every ten minutes. Data were collected to obtain values for voltage in millivolts (mV), current in microamps (microA), and power in microwatts (microW), as well as beginning and ending efficiencies in converting light to usable energy. Voltages were substantially higher during the day than at night for all pigments, except for the control, indicating that the pigments functioned as DSSCs. Hence, only daytime values were used for data analysis. Voltage during the ten-day experiment ranged from 3.99 to 274 mV; current ranged from 0.0180 to 41.9 microA, and power ranged from 0.00 to 11.3 microW. Chlorophyllin had the highest peak and least voltage (274 and 161 mV), highest peak and least current (41.9 and 21.8 microA), and highest peak and least power (11.3 and 4.84 microW). The ranking of the pigments for peak voltage was: Chlorophyllin = Crude Extract ≥ Chlorophyll a = Chlorophyll a/b ≥ Phycocyanin = Chlorophyll b > Control. The ranking for least voltage was: Chlorophyllin > Phycocyanin ≥ Chlorophyll a/b ≥ Crude Extract ≥ Chlorophyll b ≥ Chlorophyll a ≥ Control. Ranking for peak and least values were similar for current and power. Solar energy conversion (efficiency in converting light energy to usable energy in watts per square meter) for all treatments ranged from 0.000595 to 0.0217% at the beginning of the experiment, and was highest in cells constructed with chlorophyllin. Based on rankings from peak and ending voltage values, as well as other measurements, it was concluded that DSSCs constructed with chlorophyllin performed the best and lasted the longest as photo-sensitizers, compared to other pigments used in this investigation. The DSSCs constructed with crude extract performed almost as well as those constructed with chlorophyllin at the beginning of the experiment, but degradation of this naturally-made pigment may have prevented these cells from sustaining solar energy conversion for more than a few days. Other pigments demonstrated conversion values higher than those of control DSSCs which contained no pigments. The results from this project provide evidence that DSSCs can produce useable energy. More research is needed to enhance and prolong the efficiency of DSSCs in solar energy conversion.

Rethinking Chlorophyll Responses To Stress: Fluorescence and Flectance Remote Sensing in a Coastal Environment

DTIC Science & Technology

2010-11-15

fluorescence emission of vegetation for mapping vegetation stress as chlorophyll content and/or carotenoid content changes. 1. REPORT DATE (DD-MM-YYYY...that estimate fluorescence emission of vegetation for mapping vegetation stress as chlorophyll content and/or carotenoid content changes...not related to changes in chlorophyll content or the carotenoids /chlorophyll ratio. PRI is an indicator of chronic salinity stress and may be used as

STAY-GREEN and Chlorophyll Catabolic Enzymes Interact at Light-Harvesting Complex II for Chlorophyll Detoxification during Leaf Senescence in Arabidopsis[C][W

PubMed Central

Sakuraba, Yasuhito; Schelbert, Silvia; Park, So-Yon; Han, Su-Hyun; Lee, Byoung-Doo; Andrès, Céline Besagni; Kessler, Felix; Hörtensteiner, Stefan; Paek, Nam-Chon

2012-01-01

During leaf senescence, plants degrade chlorophyll to colorless linear tetrapyrroles that are stored in the vacuole of senescing cells. The early steps of chlorophyll breakdown occur in plastids. To date, five chlorophyll catabolic enzymes (CCEs), NONYELLOW COLORING1 (NYC1), NYC1-LIKE, pheophytinase, pheophorbide a oxygenase (PAO), and red chlorophyll catabolite reductase, have been identified; these enzymes catalyze the stepwise degradation of chlorophyll to a fluorescent intermediate, pFCC, which is then exported from the plastid. In addition, STAY-GREEN (SGR), Mendel’s green cotyledon gene encoding a chloroplast protein, is required for the initiation of chlorophyll breakdown in plastids. Senescence-induced SGR binds to light-harvesting complex II (LHCII), but its exact role remains elusive. Here, we show that all five CCEs also specifically interact with LHCII. In addition, SGR and CCEs interact directly or indirectly with each other at LHCII, and SGR is essential for recruiting CCEs in senescing chloroplasts. PAO, which had been attributed to the inner envelope, is found to localize in the thylakoid membrane. These data indicate a predominant role for the SGR-CCE-LHCII protein interaction in the breakdown of LHCII-located chlorophyll, likely to allow metabolic channeling of phototoxic chlorophyll breakdown intermediates upstream of nontoxic pFCC. PMID:22366162

Response of an algal consortium to diesel under varying culture conditions.

PubMed

Chavan, Anal; Mukherji, Suparna

2010-03-01

A diesel-tolerant sessile freshwater algal consortium obtained from the vicinity of Powai Lake (Mumbai, India) was cultured in the laboratory. The presence of diesel in batch cultures enhanced the maximum specific growth rate of the algal consortium. With decrease in light-dark (L:D) cycle from 20:4 to 4:20 h, the chlorophyll-a levels decreased; however, the removal of diesel was found to be maximum at L:D of 18:6 h with 37.6% degradation over and above controls. In addition to growth in the form of green clumps, white floating biomass was found surrounding the diesel droplets on the surface. This culture predominated at the least L:D ratio of 4:20 h. Studies confirmed the ability of the floating organisms to grow heterotrophically in the dark utilizing diesel as carbon source and also in the presence of light in a medium devoid of organic carbon sources.

Nitrogen balancing and xylose addition enhances growth capacity and protein content in Chlorella minutissima cultures.

PubMed

Freitas, B C B; Esquível, M G; Matos, R G; Arraiano, C M; Morais, M G; Costa, J A V

2016-10-01

This study aimed to examine the metabolic changes in Chlorella minutissima cells grown under nitrogen-deficient conditions and with the addition of xylose. The cell density, maximum photochemical efficiency, and chlorophyll and lipid levels were measured. The expression of two photosynthetic proteins, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) and the beta subunit (AtpB) of adenosine triphosphate synthase, were measured. Comparison of cells grown in medium with a 50% reduction in the nitrogen concentration versus the traditional medium solution revealed that the cells grown under nitrogen-deficient conditions exhibited an increased growth rate, higher maximum cell density (12.7×10(6)cellsmL(-1)), optimal PSII efficiency (0.69) and decreased lipid level (25.08%). This study has taken the first steps toward protein detection in Chlorella minutissima, and the results can be used to optimize the culturing of other microalgae. Copyright © 2016 Elsevier Ltd. All rights reserved.

Field-effect transistor having a superlattice channel and high carrier velocities at high applied fields

DOEpatents

Chaffin, R.J.; Dawson, L.R.; Fritz, I.J.; Osbourn, G.C.; Zipperian, T.E.

1984-04-19

In a field-effect transistor comprising a semiconductor having therein a source, a drain, a channel and a gate in operational relationship, there is provided an improvement wherein said semiconductor is a superlattice comprising alternating quantum well and barrier layers, the quantum well layers comprising a first direct gap semiconductor material which in bulk form has a certain bandgap and a curve of electron velocity versus applied electric field which has a maximum electron velocity at a certain electric field, the barrier layers comprising a second semiconductor material having a bandgap wider than that of said first semiconductor material, wherein the layer thicknesses of said quantum well and barrier layers are sufficiently thin that the alternating layers constitute a superlattice having a curve of electron velocity versus applied electric field which has a maximum electron velocity at a certain electric field, and wherein the thicknesses of said quantum well layers are selected to provide a superlattice curve of electron velocity versus applied electric field whereby, at applied electric fields higher than that at which the maximum electron velocity occurs in said first material when in bulk form, the electron velocities are higher in said superlattice than they are in said first semiconductor material in bulk form.

Using tsunami deposits to determine the maximum depth of benthic burrowing

PubMed Central

Shirai, Kotaro; Murakami-Sugihara, Naoko

2017-01-01

The maximum depth of sediment biomixing is directly related to the vertical extent of post-depositional environmental alteration in the sediment; consequently, it is important to determine the maximum burrowing depth. This study examined the maximum depth of bioturbation in a natural marine environment in Funakoshi Bay, northeastern Japan, using observations of bioturbation structures developed in an event layer (tsunami deposits of the 2011 Tohoku-Oki earthquake) and measurements of the radioactive cesium concentrations in this layer. The observations revealed that the depth of bioturbation (i.e., the thickness of the biomixing layer) ranged between 11 and 22 cm, and varied among the sampling sites. In contrast, the radioactive cesium concentrations showed that the processing of radioactive cesium in coastal environments may include other pathways in addition to bioturbation. The data also revealed the nature of the bioturbation by the heart urchin Echinocardium cordatum (Echinoidea: Loveniidae), which is one of the important ecosystem engineers in seafloor environments. The maximum burrowing depth of E. cordatum in Funakoshi Bay was 22 cm from the seafloor surface. PMID:28854254

Using tsunami deposits to determine the maximum depth of benthic burrowing.

PubMed

Seike, Koji; Shirai, Kotaro; Murakami-Sugihara, Naoko

2017-01-01

The maximum depth of sediment biomixing is directly related to the vertical extent of post-depositional environmental alteration in the sediment; consequently, it is important to determine the maximum burrowing depth. This study examined the maximum depth of bioturbation in a natural marine environment in Funakoshi Bay, northeastern Japan, using observations of bioturbation structures developed in an event layer (tsunami deposits of the 2011 Tohoku-Oki earthquake) and measurements of the radioactive cesium concentrations in this layer. The observations revealed that the depth of bioturbation (i.e., the thickness of the biomixing layer) ranged between 11 and 22 cm, and varied among the sampling sites. In contrast, the radioactive cesium concentrations showed that the processing of radioactive cesium in coastal environments may include other pathways in addition to bioturbation. The data also revealed the nature of the bioturbation by the heart urchin Echinocardium cordatum (Echinoidea: Loveniidae), which is one of the important ecosystem engineers in seafloor environments. The maximum burrowing depth of E. cordatum in Funakoshi Bay was 22 cm from the seafloor surface.

Lil3 dimerization and chlorophyll binding in Arabidopsis thaliana.

PubMed

Mork-Jansson, Astrid Elisabeth; Gargano, Daniela; Kmiec, Karol; Furnes, Clemens; Shevela, Dmitriy; Eichacker, Lutz Andreas

2015-10-07

The two-helix light harvesting like (Lil) protein Lil3 belongs to the family of chlorophyll binding light harvesting proteins of photosynthetic membranes. A function in tetrapyrrol synthesis and stabilization of geranylgeraniol reductase has been shown. Lil proteins contain the chlorophyll a/b-binding motif; however, binding of chlorophyll has not been demonstrated. We find that Lil3.2 from Arabidopsis thaliana forms heterodimers with Lil3.1 and binds chlorophyll. Lil3.2 heterodimerization (25±7.8 nM) is favored relative to homodimerization (431±59 nM). Interaction of Lil3.2 with chlorophyll a (231±49 nM) suggests that heterodimerization precedes binding of chlorophyll in Arabidopsis thaliana. Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Chlorophyll Synthase under Epigenetic Surveillance Is Critical for Vitamin E Synthesis, and Altered Expression Affects Tocopherol Levels in Arabidopsis1[OPEN

PubMed Central

Zhang, Chunyu; Zhang, Wei; Ren, Guodong; Li, Delin; Cahoon, Rebecca E.; Chen, Ming; Zhou, Yongming; Yu, Bin

2015-01-01

Chlorophyll synthase catalyzes the final step in chlorophyll biosynthesis: the esterification of chlorophyllide with either geranylgeranyl diphosphate or phytyl diphosphate (PDP). Recent studies have pointed to the involvement of chlorophyll-linked reduction of geranylgeranyl by geranylgeranyl reductase as a major pathway for the synthesis of the PDP precursor of tocopherols. This indirect pathway of PDP synthesis suggests a key role of chlorophyll synthase in tocopherol production to generate the geranylgeranyl-chlorophyll substrate for geranylgeranyl reductase. In this study, contributions of chlorophyll synthase to tocopherol formation in Arabidopsis (Arabidopsis thaliana) were explored by disrupting and altering expression of the corresponding gene CHLOROPHYLL SYNTHASE (CHLSYN; At3g51820). Leaves from the homozygous chlysyn1-1 null mutant were nearly devoid of tocopherols, whereas seeds contained only approximately 25% of wild-type tocopherol levels. Leaves of RNA interference lines with partial suppression of CHLSYN displayed marked reductions in chlorophyll but up to a 2-fold increase in tocopherol concentrations. Cauliflower mosaic virus35S-mediated overexpression of CHLSYN unexpectedly caused a cosuppression phenotype at high frequencies accompanied by strongly reduced chlorophyll content and increased tocopherol levels. This phenotype and the associated detection of CHLSYN-derived small interfering RNAs were reversed with CHLSYN overexpression in rna-directed rna polymerase6 (rdr6), which is defective in RNA-dependent RNA polymerase6, a key enzyme in sense transgene-induced small interfering RNA production. CHLSYN overexpression in rdr6 had little effect on chlorophyll content but resulted in up to a 30% reduction in tocopherol levels in leaves. These findings show that altered CHLSYN expression impacts tocopherol levels and also, show a strong epigenetic surveillance of CHLSYN to control chlorophyll and tocopherol synthesis. PMID:26048882

Chlorophyll Synthase under Epigenetic Surveillance Is Critical for Vitamin E Synthesis, and Altered Expression Affects Tocopherol Levels in Arabidopsis.

PubMed

Zhang, Chunyu; Zhang, Wei; Ren, Guodong; Li, Delin; Cahoon, Rebecca E; Chen, Ming; Zhou, Yongming; Yu, Bin; Cahoon, Edgar B

2015-08-01

Chlorophyll synthase catalyzes the final step in chlorophyll biosynthesis: the esterification of chlorophyllide with either geranylgeranyl diphosphate or phytyl diphosphate (PDP). Recent studies have pointed to the involvement of chlorophyll-linked reduction of geranylgeranyl by geranylgeranyl reductase as a major pathway for the synthesis of the PDP precursor of tocopherols. This indirect pathway of PDP synthesis suggests a key role of chlorophyll synthase in tocopherol production to generate the geranylgeranyl-chlorophyll substrate for geranylgeranyl reductase. In this study, contributions of chlorophyll synthase to tocopherol formation in Arabidopsis (Arabidopsis thaliana) were explored by disrupting and altering expression of the corresponding gene CHLOROPHYLL SYNTHASE (CHLSYN; At3g51820). Leaves from the homozygous chlysyn1-1 null mutant were nearly devoid of tocopherols, whereas seeds contained only approximately 25% of wild-type tocopherol levels. Leaves of RNA interference lines with partial suppression of CHLSYN displayed marked reductions in chlorophyll but up to a 2-fold increase in tocopherol concentrations. Cauliflower mosaic virus35S-mediated overexpression of CHLSYN unexpectedly caused a cosuppression phenotype at high frequencies accompanied by strongly reduced chlorophyll content and increased tocopherol levels. This phenotype and the associated detection of CHLSYN-derived small interfering RNAs were reversed with CHLSYN overexpression in rna-directed rna polymerase6 (rdr6), which is defective in RNA-dependent RNA polymerase6, a key enzyme in sense transgene-induced small interfering RNA production. CHLSYN overexpression in rdr6 had little effect on chlorophyll content but resulted in up to a 30% reduction in tocopherol levels in leaves. These findings show that altered CHLSYN expression impacts tocopherol levels and also, show a strong epigenetic surveillance of CHLSYN to control chlorophyll and tocopherol synthesis. © 2015 American Society of Plant Biologists. All Rights Reserved.

Analysis of turbulent free-convection boundary layer on flat plate

NASA Technical Reports Server (NTRS)

Eckert, E R G; Jackson, Thomas W

1950-01-01

A calculation was made for the flow and heat transfer in the turbulent free-convection boundary layer on a vertical flat plate. Formulas for the heat-transfer coefficient, boundary layer thickness, and the maximum velocity in the boundary layer were obtained.

HPLC Analysis of Chlorophyll a, Chlorophyll b, and Beta-Carotene in Collard Greens: A Project for a Problem-Oriented Laboratory Course.

ERIC Educational Resources Information Center

Silveira, Augustine, Jr.; And Others

1984-01-01

High performance liquid chromatography (HPLC) is used to separate and quantitate beta-carotene, chlorophyll a, and chlorophyll b originating from collard greens. Experimental procedures used and typical results obtained are discussed. (JN)

The Green Gut: Chlorophyll Degradation in the Gut of Spodoptera littoralis.

PubMed

Badgaa, Amarsanaa; Büchler, Rita; Wielsch, Natalie; Walde, Marie; Heintzmann, Rainer; Pauchet, Yannik; Svatos, Ales; Ploss, Kerstin; Boland, Wilhelm

2015-11-01

Chlorophylls, the most prominent natural pigments, are part of the daily diet of herbivorous insects. The spectrum of ingested and digested chlorophyll metabolites compares well to the pattern of early chlorophyll-degradation products in senescent plants. Intact chlorophyll is rapidly degraded by proteins in the front- and midgut. Unlike plants, insects convert both chlorophyll a and b into the corresponding catabolites. MALDI-TOF/MS imaging allowed monitoring the distribution of the chlorophyll catabolites along the gut of Spodoptera littoralis larvae. The chlorophyll degradation in the fore- and mid-gut is strongly pH dependent, and requires alkaline conditions. Using LC-MS/MS analysis we identified a lipocalin-type protein in the intestinal fluid of S. littoralis homolog to the chlorophyllide a binding protein from Bombyx mori. Widefield and high-resolution autofluorescence microscopy revealed that the brush border membranes are covered with the chlorophyllide binding protein tightly bound via its GPI-anchor to the gut membrane. A function in defense against gut microbes is discussed.

Study on changing rules of chlorophyll concentration of detached canola leaves

NASA Astrophysics Data System (ADS)

Huang, Min; Feng, Lei; He, Yong; Zhu, Zheyan

2006-09-01

Chlorophyll is important for crops. The chlorophyll concentration is commonly used as the principal symptom of senescence. The objective of this paper was to study the relationship between the chlorophyll concentration and the time after the leaves being separated from the canola to confirm the detached leaves' senescence rate. The chlorophyll meter (SPAD meter) has been used in chlorophyll concentration measurement of fruit trees, sugar maple leaves in forest, corn with varying color and so on. In the experiment, a Minolta SPAD-502 chlorophyll Meter was used for measuring the chlorophyll concentration after picking off the canola leaves for 0 hour, 5 hours, 15 hours, 25 hours and 40 hours, and 25 samples were measured. As a result, the leaf senescence rules were found by observing the changing curves of the leaves' SPAD values. The original detached canola leaves were divided into three kinds of samples, and a certain senescence rule was found for each kind of samples. The results could provide good methods support to delay leaf senescence.

The effects of particles and dissolved materials on in situ algal pigment fluorescence sensors

NASA Astrophysics Data System (ADS)

Saraceno, J.; Bergamaschi, B. A.; Downing, B. D.

2013-12-01

Field deployable sensors that measure algal pigment fluorescence (APF), such as chlorophyll-a (excitation/emission ca. 470/685 nm), and phycocyanin (ca. 590/685 nm), have been used to estimate algal biomass and study food-web dynamics in coastal and oceanic waters for many years. There is also widespread use of these sensors in real time river-observing networks. However, freshwater systems often possess elevated levels of suspended solids and dissolved organic material that can interfere with optical measurements. Data collected under conditions that result in interferences may not be comparable across time and between sites unless the data are appropriately corrected. Using standard reference materials and a surrogate for algal fluorescence (Rhodamine WT), lab experiments were conducted on several commercially available sensors to quantify sensitivity to interferences over a range of naturally occurring surface water conditions (DOC : 0-30 mg/L and turbidity: 0- 1000 FNU ). Chlorophyll-a sensors exhibited a slight but significant positive bias (<1%) at DOC concentrations < 2 mg/L, and a negative, non-linear bias at DOC concentrations >2 mg/L, with signal quenching reaching a maximum of 15% at 30 mg/L DOC. All phycocyanin sensors displayed a positive non-linear bias with DOC concentration, reaching a maximum of 40% difference at 30 mg/L DOC. Both chlorophyll-a and phycocyanin sensors showed a positive linear relationship with suspended solids concentration (as indicated by turbidity).The effect of suspended solids on APF output can be explained by the detection of scattered excitation light (leaking through emission filters). Similar qualitative effects were observed for the sensors tested, though the magnitude of the effect varied among sensor type. This indicates that differences in sensor designs such as geometry, wavelength and signal post processing techniques is related to its sensitivity to interferences. Although sensors exhibited significant cross sensitivity to interferences, our results indicate that simple corrections can largely remove sensor bias. To remove bias due to optical interferences and generate high quality, repeatable APF data, knowledge of the optical properties of the matrix and/or coincident measures of the concentration of suspended solids and dissolved organics (through surrogates such as turbidity and colored dissolved organic matter (cDOM) fluorescence, respectively), are typically needed.

Genetic and Hormonal Regulation of Chlorophyll Degradation during Maturation of Seeds with Green Embryos.

PubMed

Smolikova, Galina; Dolgikh, Elena; Vikhnina, Maria; Frolov, Andrej; Medvedev, Sergei

2017-09-16

The embryos of some angiosperms (usually referred to as chloroembryos) contain chlorophylls during the whole period of embryogenesis. Developing embryos have photochemically active chloroplasts and are able to produce assimilates, further converted in reserve biopolymers, whereas at the late steps of embryogenesis, seeds undergo dehydration, degradation of chlorophylls, transformation of chloroplast in storage plastids, and enter the dormancy period. However, in some seeds, the process of chlorophyll degradation remains incomplete. These residual chlorophylls compromise the quality of seed material in terms of viability, nutritional value, and shelf life, and represent a serious challenge for breeders and farmers. The mechanisms of chlorophyll degradation during seed maturation are still not completely understood, and only during the recent decades the main pathways and corresponding enzymes could be characterized. Among the identified players, the enzymes of pheophorbide a oxygenase pathway and the proteins encoded by STAY GREEN ( SGR ) genes are the principle ones. On the biochemical level, abscisic acid (ABA) is the main regulator of seed chlorophyll degradation, mediating activity of corresponding catabolic enzymes on the transcriptional level. In general, a deep insight in the mechanisms of chlorophyll degradation is required to develop the approaches for production of chlorophyll-free high quality seeds.

Low light intensity and nitrogen starvation modulate the chlorophyll content of Scenedesmus dimorphus.

PubMed

Ferreira, V S; Pinto, R F; Sant'Anna, C

2016-03-01

Chlorophyll is a photosynthetic pigment found in plants and algal organisms and is a bioproduct with human health benefits and a great potential for use in the food industry. The chlorophyll content in microalgae strains varies in response to environmental factors. In this work, we assessed the effect of nitrogen depletion and low light intensity on the chlorophyll content of the Scenedesmus dimorphus microalga. The growth of S. dimorphus under low light intensity led to a reduction in cell growth and volume as well as increased cellular chlorophyll content. Nitrogen starvation led to a reduction in cell growth and the chlorophyll content, changes in the yield and productivity of chlorophylls a and b. Transmission electron microscopy was used to investigate the ultrastructural changes in the S. dimorphus exposed to nitrogen and light deficiency. In contrast to nitrogen depletion, low light availability was an effective mean for increasing the total chlorophyll content of green microalga S. dimorphus. The findings acquired in this work are of great biotechnological importance to extend knowledge of choosing the right culture condition to stimulate the effectiveness of microalgae strains for chlorophyll production purposes. © 2015 The Society for Applied Microbiology.

Genetic and Hormonal Regulation of Chlorophyll Degradation during Maturation of Seeds with Green Embryos

PubMed Central

Dolgikh, Elena; Vikhnina, Maria; Frolov, Andrej

2017-01-01

The embryos of some angiosperms (usually referred to as chloroembryos) contain chlorophylls during the whole period of embryogenesis. Developing embryos have photochemically active chloroplasts and are able to produce assimilates, further converted in reserve biopolymers, whereas at the late steps of embryogenesis, seeds undergo dehydration, degradation of chlorophylls, transformation of chloroplast in storage plastids, and enter the dormancy period. However, in some seeds, the process of chlorophyll degradation remains incomplete. These residual chlorophylls compromise the quality of seed material in terms of viability, nutritional value, and shelf life, and represent a serious challenge for breeders and farmers. The mechanisms of chlorophyll degradation during seed maturation are still not completely understood, and only during the recent decades the main pathways and corresponding enzymes could be characterized. Among the identified players, the enzymes of pheophorbide a oxygenase pathway and the proteins encoded by STAY GREEN (SGR) genes are the principle ones. On the biochemical level, abscisic acid (ABA) is the main regulator of seed chlorophyll degradation, mediating activity of corresponding catabolic enzymes on the transcriptional level. In general, a deep insight in the mechanisms of chlorophyll degradation is required to develop the approaches for production of chlorophyll-free high quality seeds. PMID:28926960

Low-Speed Wind-Tunnel Investigation of Blowing Boundary-Layer Control on Leading- and Trailing-Edge Flaps of a Large-Scale, Low-Aspect-Ratio, 45 Swept-wing Airplane Configuration

NASA Technical Reports Server (NTRS)

Maki, Ralph L.

1959-01-01

Blowing boundary-layer control was applied to the leading- and trailing-edge flaps of a 45 deg sweptback-wing complete model in a full-scale low-speed wind-tunnel study. The principal purpose of the study was to determine the effects of leading-edge flap deflection and boundary-layer control on maximum lift and longitudinal stability. Leading-edge flap deflection alone was sufficient to maintain static longitudinal stability without trailing-edge flaps. However, leading-edge flap blowing was required to maintain longitudinal stability by delaying leading-edge flow separation when trailing-edge flaps were deflected either with or without blowing. Partial-span leading-edge flaps deflected 60 deg with moderate blowing gave the major increase in maximum lift, although higher deflection and additional blowing gave some further increase. Inboard of 0.4 semispan leading-edge flap deflection could be reduced to 40 deg and/or blowing could be omitted with only small loss in maximum lift. Trailing-edge flap lift increments were increased by boundary-layer control for deflections greater than 45 deg. Maximum lift was not increased with deflected trailing-edge flaps with blowing.

Elucidation of Genetic Backgrounds Necessary for Chlorophyll a Biosynthesis Toward Artificial Creation of Oxygenic Photosynthesis

NASA Astrophysics Data System (ADS)

Tsukatani, Yusuke; Masuda, Shinji

2015-09-01

We succeeded to create the genetically modified purple photosynthetic bacterium capable of synthesizing chlorophyll a. The results indicate that not only chlorophyll synthase, but also an enzyme for galactolipid synthesis and reaction center proteins are required for accumulating chlorophyll a.

Hydrography of Bahia Todos Santos, Baja California: Results of more than twenty five years of investigations.

NASA Astrophysics Data System (ADS)

Bustos-Serrano, H.; Canino-Herrera, S. R.; Morales-Chavez, R.; Martinez-Garcia, G. M.

2007-05-01

The first study of Bahia Todos Santos (BTS) was reported by Walton in 1955. We conducted oceanographic studies in BTS since 1979. The BTS has a connection with a coastal lagoon named Estero de Punta Banda (EPB), two islands at the western portion and the Port of Ensenada. The general hydrographic characteristics are: In winter the water became homogeneous, less saline (<33.4) and with low stability. During spring and summer a hydrographic structure of three layers is noticed. The deepest layer is composed of the southern California water mass with a relatively high salinity (>33.6) low temperature (13°C), low oxygen (~3mL L-1) and rich in nutrient concentration. The isothermal top layer has relatively high temperature (>17°C) and oxygen concentration (>6mL L-1). The intermediate transition layer (seasonal thermocline) has minimum salinity, maximum oxygen and high stability. During fall there is distribution of heat from the surface layer to the entire water column. The thermic waves propagate with decrease amplitude in ~3 months, from surface to bottom water. The California Current flow generally southward off the western United States and northern Mexico and is one of the major coastal upwelling of the word oceans. The upwelling events in BTS appear regularly at the SW portion and were typically characterized by an increase in pCO2, decrease of O2, increase of nutrients and a lower temperature. Upwelling activity increases surface nutrient availability causing rise in the primary productivity and hence increased zooplankton biomass. The annual upwelling event which had a maximum strength on May, the seasonal warming and cooling, and the water advection were the dominant modifying processes for the variability of seawater characteristics. Higher salinities are located close to the coastline and lower off the bay. The levels of oxygen, alkalinity, pH and chlorophyll indicate that the maximum concentration of phytoplankton is located at the center of the bay. The nitrification support the primary productivity and the NO3 levels were below detection limits; the N/P ratio in 2005 was from 10 to 25; and for 2006 was below 5. There is a net enrichment of anthropogenic nutrients at BTS. The heavy metals and pesticides studies started since the early 80's with problems still to solve for Tl, Cd. There is a net Pb enrichment and higher Cr concentrations at the NE of the bay. The EPB is a wetland ~7 Km. long located at the SE part of the BTS. The EPB is a net source of DIP (deltaDIP = +0.13 mmol m-2 day-1), that brings agricultural runoff to the BTS. It is typically a hypersaline system during summer and a net heterotrophic (p-r = -14 mmol m-2 day-1), and a net denitrifying (nfix-denit = -2.1 mmol m-2 day-1) system. Some anomalies were in 2005 the presence of a huge red tide observed inside BTS (about 50% of the bay) that last for more than six months, this HAB's has killed many fishes (anoxia) and marine mammals. The hydrographic conditions during the red tide were, temperature anomalies higher than 2°C above normal; high nutrient concentration above the normal. In 2006 the values were normal again. The Port of Ensenada, increased in size and activities (tourism, transportation, coastguards for national security, cement industry, research) these developments generate some management problems, like the beach and coastline modification. The aground of the APL Panama, activates the management agencies to prevent and control pollution.

A nondestructive method to estimate the chlorophyll content of Arabidopsis seedlings

DOE PAGES

Liang, Ying; Urano, Daisuke; Liao, Kang-Ling; ...

2017-04-14

Chlorophyll content decreases in plants under stress conditions, therefore it is used commonly as an indicator of plant health. Arabidopsis thaliana offers a convenient and fast way to test physiological phenotypes of mutations and treatments. But, chlorophyll measurements with conventional solvent extraction are not applicable to Arabidopsis leaves due to their small size, especially when grown on culture dishes. We provide a nondestructive method for chlorophyll measurement whereby the red, green and blue (RGB) values of a color leaf image is used to estimate the chlorophyll content from Arabidopsis leaves. The method accommodates different profiles of digital cameras by incorporatingmore » the ColorChecker chart to make the digital negative profiles, to adjust the white balance, and to calibrate the exposure rate differences caused by the environment so that this method is applicable in any environment. We chose an exponential function model to estimate chlorophyll content from the RGB values, and fitted the model parameters with physical measurements of chlorophyll contents. As further proof of utility, this method was used to estimate chlorophyll content of G protein mutants grown on different sugar to nitrogen ratios. Our method is a simple, fast, inexpensive, and nondestructive estimation of chlorophyll content of Arabidopsis seedlings. This method lead to the discovery that G proteins are important in sensing the C/N balance to control chlorophyll content in Arabidopsis.« less

Plant pigments (antioxidants) of medicinal plants Malva silvestris L. and Malva moschata L. (Malvaceae).

PubMed

Redzić, Sulejman; Hodzić, Nizama; Tuka, Mijat

2005-05-01

Qualitative-quantitative structure of plant pigments in wild plants Malva silvestrs L. and Malva moschata L. (Malvaceae), which were collected in 20 locations in Sarajevo area and surroundings, was tested during spring and summer in 2003. Acetone extracts of both categories were made and rising paper-chromatography done for the purpose of qualitative analysis. Quantitative analysis was done by spectrophotometry. Chlorophyll a, chlorophyll b and xanthophylls presence was confirmed by separation of pigments from acetone extract of these plant species. Spectrophotometric analysis of acetone extracts showed these results (given in mg/L): chlorophyll a 2,386, chlorophyll b 0,332 and carrotenoides 1,037. Data given in mg/g dry substance are: chlorophyll a 1,193x10(-2), chlorophyll b 1,66x10(-3), and carrotenoides 5,185x10(-3). Pigments structure (in mg/L) in species Malva moschata is 1,6 for chlorophyll; 1,419 for chlorophyll b; and 0,364 for carrotenoides. Data given in mg/g are: chlorophyll a 8x10(-3), chlorophyll b 7,09x10(-3), and carrotenoides 1,82x10(-3). Considering that species Malva moschata L. grows on ecologically clear soils as opposed to well-known medicinal species Malva sylvestris L., and considering the production of phytomass, phytochemical structure and pharmacological influence it can be considered very medical and be given advantage over this wider spread category.

Chlorophyll content retrieval from hyperspectral remote sensing imagery.

PubMed

Yang, Xiguang; Yu, Ying; Fan, Wenyi

2015-07-01

Chlorophyll content is the essential parameter in the photosynthetic process determining leaf spectral variation in visible bands. Therefore, the accurate estimation of the forest canopy chlorophyll content is a significant foundation in assessing forest growth and stress affected by diseases. Hyperspectral remote sensing with high spatial resolution can be used for estimating chlorophyll content. In this study, the chlorophyll content was retrieved step by step using Hyperion imagery. Firstly, the spectral curve of the leaf was analyzed, 25 spectral characteristic parameters were identified through the correlation coefficient matrix, and a leaf chlorophyll content inversion model was established using a stepwise regression method. Secondly, the pixel reflectance was converted into leaf reflectance by a geometrical-optical model (4-scale). The three most important parameters of reflectance conversion, including the multiple scattering factor (M 0 ), and the probability of viewing the sunlit tree crown (P T ) and the background (P G ), were estimated by leaf area index (LAI), respectively. The results indicated that M 0 , P T , and P G could be described as a logarithmic function of LAI, with all R (2) values above 0.9. Finally, leaf chlorophyll content was retrieved with RMSE = 7.3574 μg/cm(2), and canopy chlorophyll content per unit ground surface area was estimated based on leaf chlorophyll content and LAI. Chlorophyll content mapping can be useful for the assessment of forest growth stage and diseases.

Monitoring the efficacy and metabolism of phenylcarbamates in sugar beet and black nightshade by chlorophyll fluorescence parameters.

PubMed

Abbaspoor, Majid; Streibig, Jens C

2007-06-01

Desmedipham, phenmedipham and a 50% mixture of the two decreased the maximum quantum efficiency of photosystem II (F(v)/F(m)) and the relative changes at the J step (F(vj)) immediately after spraying in both sugar beet and black nightshade grown in the greenhouse. Sugar beet recovered more rapidly from phenmedipham and the mixture than from desmedipham. Desmedipham and the mixture irreversibly affected F(v)/F(m) and F(vj) in black nightshade at much lower doses than in sugar beet. Black nightshade recovered from phenmedipham injury at the highest dose in the first experiment (120 g AI ha(-1)) but not in the second experiment (500 g AI ha(-1)). The dry matter dose-response relationships and the energy pipeline presentation confirmed the same trend. There was a relatively good correlation between F(vj) taken 1 day after spraying and dry matter taken 2 or 3 weeks after spraying. The differential speed of herbicide metabolism between weed and crop plays an important role in herbicide selectivity and can be studied by using appropriate chlorophyll a fluorescence parameters. Copyright 2007 Society of Chemical Industry.

Seasonal Differences in Spatial Scales of Chlorophyll-A Concentration in Lake TAIHU，CHINA

NASA Astrophysics Data System (ADS)

Bao, Y.; Tian, Q.; Sun, S.; Wei, H.; Tian, J.

2012-08-01

Spatial distribution of chlorophyll-a (chla) concentration in Lake Taihu is non-uniform and seasonal variability. Chla concentration retrieval algorithms were separately established using measured data and remote sensing images (HJ-1 CCD and MODIS data) in October 2010, March 2011, and September 2011. Then parameters of semi- variance were calculated on the scale of 30m, 250m and 500m for analyzing spatial heterogeneity in different seasons. Finally, based on the definitions of Lumped chla (chlaL) and Distributed chla (chlaD), seasonal model of chla concentration scale error was built. The results indicated that: spatial distribution of chla concentration in spring was more uniform. In summer and autumn, chla concentration in the north of the lake such as Meiliang Bay and Zhushan Bay was higher than that in the south of Lake Taihu. Chla concentration on different scales showed the similar structure in the same season, while it had different structure in different seasons. And inversion chla concentration from MODIS 500m had a greater scale error. The spatial scale error changed with seasons. It was higher in summer and autumn than that in spring. The maximum relative error can achieve 23%.

Characterisation of chlorophyll a solubilised in sodium lauryl sulphate micelles

NASA Astrophysics Data System (ADS)

Mukherjee, T.; Sapre, A. V.; Mittal, Jai P.

1980-01-01

Poisson statistics has been applied to the problem of solubilisation of chlorophyll a in sodium lauryl sulphate micelles. Dilution experiments have been carried out to support the finding that each unit of chlorophyll a contributing to the 740 nm band contains just one chlorophyll a molecule.

Results of Sustained Observations from SABSOON

NASA Astrophysics Data System (ADS)

Seim, H.; Nelson, J.

2001-12-01

A variety of meteorological and oceanographic data being collected on the continental shelf off Georgia by the South Atlantic Bight Synoptic Offshore Observational Network (SABSOON) permit an examination of episodic and seasonal phenomena operative on the shelf. Data are collected at offshore platforms and transmitted to shore in near-real time and made available on the project website. Examples of data collected since 1999 are presented that illustrate some of processes being addressed using the network. Maximum winds occur during remarkably energetic downbursts observed in spring and summer, associated with the passage of squalls over the coastal ocean. Peak wind speed at 50 m height exceed 40 ms and air temperature drops by 4 oC or more in less than 6 minutes, often accompanied by large changes in humidity and heavy rainfall, suggesting down draft of air from aloft. These events may play an important role in the offshore transport of continentally-derived material. Continuous ADCP measurements are being used to examine the seasonality of cross-shelf exchange and its relationship to the cross-shelf density gradient. The low-frequency cross-shelf circulation changes sign when the cross-shelf density gradient changes sign. Vertical stratification is surprisingly episodic, and maximum stratification has occurred in the winter and spring associated with appearance of long-salinity surface lens and may be associated with baroclinic instabilities. Strong stratification has also been observed in summer during Gulf Stream-derived intrusions onto the shelf, during which time the upper and lower layers become largely decoupled. Continuous optical measurements of above-water and in-water irradiance (PAR) show the mid-shelf surface sediments are often in the euphotic zone. Chlorophyll fluorescence (stimulated) shows strong light-dependent diurnal variability in near-surface waters and evidence of resuspension of benthic diatoms during storm events, particularly in the early fall. >http://www.skio.peachnet.edu/projects/sabsoon.html

44 CFR 61.6 - Maximum amounts of coverage available.

Code of Federal Regulations, 2010 CFR

2010-10-01

... program. Regular program Emergency program 1 first layer Second layer Total amount available Single Family... Churches, other properties 100,000 400,000 500,000 1 Only first layer available under emergency program. 2...

Non-destructive Determination of Shikimic Acid Concentration in Transgenic Maize Exhibiting Glyphosate Tolerance Using Chlorophyll Fluorescence and Hyperspectral Imaging

PubMed Central

Feng, Xuping; Yu, Chenliang; Chen, Yue; Peng, Jiyun; Ye, Lanhan; Shen, Tingting; Wen, Haiyong; He, Yong

2018-01-01

The development of transgenic glyphosate-tolerant crops has revolutionized weed control in crops in many regions of the world. The early, non-destructive identification of superior plant phenotypes is an important stage in plant breeding programs. Here, glyphosate-tolerant transgenic maize and its parental wild-type control were studied at 2, 4, 6, and 8 days after glyphosate treatment. Visible and near-infrared hyperspectral imaging and chlorophyll fluorescence imaging techniques were applied to monitor the performance of plants. In our research, transgenic maize, which was highly tolerant to glyphosate, was phenotyped using these high-throughput non-destructive methods to validate low levels of shikimic acid accumulation and high photochemical efficiency of photosystem II as reflected by maximum quantum yield and non-photochemical quenching in response to glyphosate. For hyperspectral imaging analysis, the combination of spectroscopy and chemometric methods was used to predict shikimic acid concentration. Our results indicated that a partial least-squares regression model, built on optimal wavelengths, effectively predicted shikimic acid concentrations, with a coefficient of determination value of 0.79 for the calibration set, and 0.82 for the prediction set. Moreover, shikimic acid concentration estimates from hyperspectral images were visualized on the prediction maps by spectral features, which could help in developing a simple multispectral imaging instrument for non-destructive phenotyping. Specific physiological effects of glyphosate affected the photochemical processes of maize, which induced substantial changes in chlorophyll fluorescence characteristics. A new data-driven method, combining mean fluorescence parameters and featuring a screening approach, provided a satisfactory relationship between fluorescence parameters and shikimic acid content. The glyphosate-tolerant transgenic plants can be identified with the developed discrimination model established on important wavelengths or sensitive fluorescence parameters 6 days after glyphosate treatment. The overall results indicated that both hyperspectral imaging and chlorophyll fluorescence imaging techniques could provide useful tools for stress phenotyping in maize breeding programs and could enable the detection and evaluation of superior genotypes, such as glyphosate tolerance, with a non-destructive high-throughput technique. PMID:29686693

Non-destructive Determination of Shikimic Acid Concentration in Transgenic Maize Exhibiting Glyphosate Tolerance Using Chlorophyll Fluorescence and Hyperspectral Imaging.

PubMed

Feng, Xuping; Yu, Chenliang; Chen, Yue; Peng, Jiyun; Ye, Lanhan; Shen, Tingting; Wen, Haiyong; He, Yong

2018-01-01

The development of transgenic glyphosate-tolerant crops has revolutionized weed control in crops in many regions of the world. The early, non-destructive identification of superior plant phenotypes is an important stage in plant breeding programs. Here, glyphosate-tolerant transgenic maize and its parental wild-type control were studied at 2, 4, 6, and 8 days after glyphosate treatment. Visible and near-infrared hyperspectral imaging and chlorophyll fluorescence imaging techniques were applied to monitor the performance of plants. In our research, transgenic maize, which was highly tolerant to glyphosate, was phenotyped using these high-throughput non-destructive methods to validate low levels of shikimic acid accumulation and high photochemical efficiency of photosystem II as reflected by maximum quantum yield and non-photochemical quenching in response to glyphosate. For hyperspectral imaging analysis, the combination of spectroscopy and chemometric methods was used to predict shikimic acid concentration. Our results indicated that a partial least-squares regression model, built on optimal wavelengths, effectively predicted shikimic acid concentrations, with a coefficient of determination value of 0.79 for the calibration set, and 0.82 for the prediction set. Moreover, shikimic acid concentration estimates from hyperspectral images were visualized on the prediction maps by spectral features, which could help in developing a simple multispectral imaging instrument for non-destructive phenotyping. Specific physiological effects of glyphosate affected the photochemical processes of maize, which induced substantial changes in chlorophyll fluorescence characteristics. A new data-driven method, combining mean fluorescence parameters and featuring a screening approach, provided a satisfactory relationship between fluorescence parameters and shikimic acid content. The glyphosate-tolerant transgenic plants can be identified with the developed discrimination model established on important wavelengths or sensitive fluorescence parameters 6 days after glyphosate treatment. The overall results indicated that both hyperspectral imaging and chlorophyll fluorescence imaging techniques could provide useful tools for stress phenotyping in maize breeding programs and could enable the detection and evaluation of superior genotypes, such as glyphosate tolerance, with a non-destructive high-throughput technique.

Eco-physiological basis of shade adaptation of Camellia nitidissima, a rare and endangered forest understory plant of Southeast Asia.

PubMed

Chai, Shengfeng; Tang, Jianmin; Mallik, Azim; Shi, Yancai; Zou, Rong; Li, Jitao; Wei, Xiao

2018-02-07

Camellia nitidissima, a rare and endangered shrub is narrowly distributed in South China and North Vietnam occurring in forest understory. Their light tolerance mechanism is unclear. We measured photosynthesis and related parameters on 2-years-old cuttings growing at 10, 30, 50 and 100% sunlight. Our research question was: At what light level are C. nitidissima cuttings responding most favorably, and what is the eco-physiological basis for their response to light? We hypothesized that as a forest understory growth of C. nitidissima would respond most favorably at low to intermediate light by optimizing photosynthetic activity, and high light will affect photosynthetic functions due to photoinhibition, damage of photosynthetic apparatus and concomitant enzyme activity. With increasing light, the maximum net photosynthetic rate (P Nmax ) and apparent quantum yield (AQY) decreased, while the light compensation point increased, and light saturation point first increased followed by a decrease. The P Nmax and AQY under 50 and 100% sunlight were significantly lower than that under 10 and 30% sunlight. The chlorophyll fluorescence parameters F m , F v , F v /F m all decreased under high light (> 50%). The contents of chlorophyll a (Chla), chlorophyll b (Chlb), and carotenoid (Car) decreased with increasing light. Relative conductivity, malondialdehyde (MDA) and proline contents in leaves were significantly increased in high light but we found no significant difference in these indices at 10 and 30% sunlight. We conclude that C. nitidissima is a shade adapted plant with poor adaptability to high light (> 50%). The novelty of this research is the demonstration of the eco-physiological basis of its light tolerance (conversely, shade adaptation) mechanisms indicated by decreased photosynthetic activity, chlorophyll fluorescence, Chla, Chlb and Car contents and concomitant increase in relative conductivity, MDA and proline contents at high light causing photoinhibition. For artificial propagation of C. nitidissima we recommend growing cuttings below 30% sunlight. For in situ conservation of this valuable, rare and endangered shrub it is necessary to protect its natural habitats.

Assessment of MODIS-Aqua chlorophyll-a algorithms in coastal and shelf waters of the eastern Arabian Sea

NASA Astrophysics Data System (ADS)

Tilstone, Gavin H.; Lotliker, Aneesh A.; Miller, Peter I.; Ashraf, P. Muhamed; Kumar, T. Srinivasa; Suresh, T.; Ragavan, B. R.; Menon, Harilal B.

2013-08-01

The use of ocean colour remote sensing to facilitate the monitoring of phytoplankton biomass in coastal waters is hampered by the high variability in absorption and scattering from substances other than phytoplankton. The eastern Arabian Sea coastal shelf is influenced by river run-off, winter convection and monsoon upwelling. Bio-optical parameters were measured along this coast from March 2009 to June 2011, to characterise the optical water type and validate three Chlorophyll-a (Chla) algorithms applied to Moderate Resolution Imaging Spectroradiometer on Aqua (MODIS-Aqua) data against in situ measurements. Ocean Colour 3 band ratio (OC3M), Garver-Siegel-Maritorena Model (GSM) and Generalized Inherent Optical Property (GIOP) Chla algorithms were evaluated. OC3M performed better than GSM and GIOP in all regions and overall, was within 11% of in situ Chla. GSM was within 24% of in situ Chla and GIOP on average was 55% lower. OC3M was less affected by errors in remote sensing reflectance Rrs(λ) and by spectral variations in absorption coefficient (aCDOM(λ)) of coloured dissolved organic material (CDOM) and total suspended matter (TSM) compared to the other algorithms. A nine year Chla time series from 2002 to 2011 was generated to assess regional differences between OC3M and GSM. This showed that in the north eastern shelf, maximum Chla occurred during the winter monsoon from December to February, where GSM consistently gave higher Chla compared to OC3M. In the south eastern shelf, maximum Chla occurred in June to July during the summer monsoon upwelling, and OC3M yielded higher Chla compared to GSM. OC3M currently provides the most accurate Chla estimates for the eastern Arabian Sea coastal waters.

Effects of Solar Ultraviolet Radiation on the Potential Efficiency of Photosystem II in Leaves of Tropical Plants1

PubMed Central

Krause, G. Heinrich; Schmude, Claudia; Garden, Hermann; Koroleva, Olga Y.; Winter, Klaus

1999-01-01

The effects of solar ultraviolet (UV)-B and UV-A radiation on the potential efficiency of photosystem II (PSII) in leaves of tropical plants were investigated in Panama (9°N). Shade-grown tree seedlings or detached sun leaves from the outer crown of mature trees were exposed for short periods (up to 75 min) to direct sunlight filtered through plastic or glass filters that absorbed either UV-B or UV-A+B radiation, or transmitted the complete solar spectrum. Persistent changes in potential PSII efficiency were monitored by means of the dark-adapted ratio of variable to maximum chlorophyll a fluorescence. In leaves of shade-grown tree seedlings, exposure to the complete solar spectrum resulted in a strong decrease in potential PSII efficiency, probably involving protein damage. A substantially smaller decline in the dark-adapted ratio of variable to maximum chlorophyll a fluorescence was observed when UV-B irradiation was excluded. The loss in PSII efficiency was further reduced by excluding both UV-B and UV-A light. The photoinactivation of PSII was reversible under shade conditions, but restoration of nearly full activity required at least 10 d. Repeated exposure to direct sunlight induced an increase in the pool size of xanthophyll cycle pigments and in the content of UV-absorbing vacuolar compounds. In sun leaves of mature trees, which contained high levels of UV-absorbing compounds, effects of UV-B on PSII efficiency were observed in several cases and varied with developmental age and acclimation state of the leaves. The results show that natural UV-B and UV-A radiation in the tropics may significantly contribute to photoinhibition of PSII during sun exposure in situ, particularly in shade leaves exposed to full sunlight. PMID:10594122

Spatial Heterogeneity of Ice Cover Sediment and Thickness and Its Effects on Photosynthetically Active Radiation and Chlorophyll-a Distribution: Lake Bonney, Antarctica

NASA Astrophysics Data System (ADS)

Obryk, M.; Doran, P. T.; Priscu, J. C.; Morgan-Kiss, R. M.; Siebenaler, A. G.

2012-12-01

The perennially ice-covered lakes in the McMurdo Dry Valleys, Antarctica have been extensively studied under the Long Term Ecological Research project. But sampling has been spatially restricted due to the logistical difficulty of penetrating the 3-6 m of ice cover. The ice covers restrict wind-driven turbulence and its associated mixing of water, resulting in a unique thermal stratification and a strong vertical gradient of salinity. The permanent ice covers also shade the underlying water column, which, in turn, controls photosynthesis. Here, we present results of a three-dimensional record of lake processes obtained with an autonomous underwater vehicle (AUV). The AUV was deployed at West Lake Bonney, located in Taylor Valley, Dry Valleys, to further understand biogeochemical and physical properties of the Dry Valley lakes. The AUV was equipped with depth, conductivity, temperature, under water photosynthetically active radiation (PAR), turbidity, chlorophyll-and-DOM fluorescence, pH, and REDOX sensors. Measurements were taken over the course of two years in a 100 x 100 meter spaced horizontal sampling grid (and 0.2 m vertical resolution). In addition, the AUV measured ice thickness and collected 200 images looking up through the ice, which were used to quantify sediment distribution. Comparison with high-resolution satellite QuickBird imagery demonstrates a strong correlation between aerial sediment distribution and ice cover thickness. Our results are the first to show the spatial heterogeneity of lacustrine ecosystems in the McMurdo Dry Valleys, significantly improving our understanding of lake processes. Surface sediment is responsible for localized thinning of ice cover due to absorption of solar radiation, which in turn increases total available PAR in the water column. Higher PAR values are negatively correlated with chlorophyll-a, presenting a paradox; historically, long-term studies of PAR and chlorophyll-a have shown positive trends. We hypothesized that this paradox is a result of short-term photoadaptation of phytoplanktonic communities to spatial and temporal variations of PAR within the water column. To test this hypothesis, we established phytoplankton enrichment cultures from depths of maximum primary production (13 m) and tested whether dry valley lake phytoplankton respond to daily variations in controlled light environment. Laboratory-grown cultures exhibited a strong response at 12 hr:12 hr day:night cycle at the level of both photochemistry and chlorophyll biosynthesis, indicating that Lake Bonney possess the ability to quickly respond to changes in their light environment.

Dynamics and stoichiometry of nutrients and phytoplankton in waters influenced by the oxygen minimum zone in the eastern tropical Pacific

NASA Astrophysics Data System (ADS)

Franz, Jasmin; Krahmann, Gerd; Lavik, Gaute; Grasse, Patricia; Dittmar, Thorsten; Riebesell, Ulf

2012-04-01

The tropical South East Pacific is characterized by strong coastal upwelling on the narrow continental shelf and an intense oxygen minimum zone (OMZ) in the intermediate water layer. These hydrographic properties are responsible for a permanent supply of intermediate water masses to the surface rich in nutrients and with a remarkably low inorganic N:P stoichiometry. To investigate the impact of OMZ-influenced upwelling waters on phytoplankton growth, elemental and taxonomical composition we measured hydrographic and biogeochemical parameters along an east-west transect at 10°S in the tropical South East Pacific, stretching from the upwelling region above the narrow continental shelf to the well-stratified oceanic section of the eastern boundary regime. New production in the area of coastal upwelling was driven by large-sized phytoplankton (e.g. diatoms) with generally low N:P ratios (<16:1). While nitrate and phosphate concentrations were at levels not limiting phytoplankton growth along the entire transect, silicate depletion prohibited diatom growth further off-shore. A deep chlorophyll a maximum consisting of pico-/nano- (Synechococcus, flagellates) and microphytoplankton occurred within a pronounced thermocline in subsurface waters above the shelf break and showed intermediate N:P ratios close to Redfield proportions. High PON:POP (>20:1) ratios were observed in the stratified open ocean section of the transect, coinciding with the abundance of two strains of the pico-cyanobacterium Prochlorococcus; a high-light adapted strain in the surface layer and a low-light adapted strain occurring along the oxic-anoxic transition zone below the thermocline. Excess phosphate present along the entire transect did not appear to stimulate growth of nitrogen-fixing phytoplankton, as pigment fingerprinting did not indicate the presence of diazotrophic cyanobacteria at any of our sampling stations. Instead, a large fraction of the excess phosphate generated within the oxygen minimum zone was consumed by non-Redfield production of large phytoplankton in shelf surface waters.

Linking mesopelagic prey abundance and distribution to the foraging behavior of a deep-diving predator, the northern elephant seal

NASA Astrophysics Data System (ADS)

Saijo, Daisuke; Mitani, Yoko; Abe, Takuzo; Sasaki, Hiroko; Goetsch, Chandra; Costa, Daniel P.; Miyashita, Kazushi

2017-06-01

The Transition Zone in the eastern North Pacific is important foraging habitat for many marine predators. Further, the mesopelagic depths (200-1000 m) host an abundant prey resource known as the deep scattering layer that supports deep diving predators, such as northern elephant seals, beaked whales, and sperm whales. Female northern elephant seals (Mirounga angustirostris) undertake biannual foraging migrations to this region where they feed on mesopelagic fish and squid; however, in situ measurements of prey distribution and abundance, as well as the subsurface oceanographic features in the mesopelagic Transition Zone are limited. While concurrently tracking female elephant seals during their post-molt migration, we conducted a ship-based oceanographic and hydroacoustic survey and used mesopelagic mid-water trawls to sample the deep scattering layer. We found that the abundance of mesopelagic fish at 400-600 m depth zone was the highest in the 43 °N zone, the primary foraging area of female seals. We identified twenty-nine families of fishes from the mid-water trawls, with energy-rich myctophid fishes dominating by species number, individual number, and wet weight. Biomass of mesopelagic fishes is positively correlated to annual net primary productivity; however, at the temporal and spatial scale of our study, we found no relationship between satellite derived surface primary production and prey density. Instead, we found that the subsurface chlorophyll maximum correlated with the primary elephant seal foraging regions, indicating a stronger linkage between mesopelagic ecosystem dynamics and subsurface features rather than the surface features measured with satellites. Our study not only provides insights on prey distribution in a little-studied deep ocean ecosystem, but shows that northern elephant seals are targeting the dense, species-diverse mesopelagic ecosystem at the gyre-gyre boundary that was previously inferred from their diving behavior.

Upper ocean stratification and sea ice growth rates during the summer-fall transition, as revealed by Elephant seal foraging in the Adélie Depression, East Antarctica

NASA Astrophysics Data System (ADS)

Williams, G. D.; Hindell, M.; Houssais, M.-N.; Tamura, T.; Field, I. C.

2010-11-01

Southern elephant seals (Mirounga leonina), fitted with Conductivity-Temperature-Depth sensors at Macquarie Island in January 2005 and 2010, collected unique oceanographic observations of the Adélie and George V Land continental shelf (140-148° E) during the summer-fall transition (late February through April). This is a key region of dense shelf water formation from enhanced sea ice growth/brine-rejection in the local coastal polynyas. In 2005 two seals occupied the continental shelf break near the grounded icebergs at the northern end of the Mertz Glacier Tongue for nearly two weeks at the onset of sea ice growth. One of the seals migrated north thereafter and the other headed west, possibly utilising the Antarctic Slope Front current near the continental shelf break. In 2010, after that years calving of the Mertz Glacier Tongue, two seals migrated to the same region but penetrated much further southwest across the Adélie Depression and occupied the Commonwealth Bay polynya from March through April. Here we present unique observations of the regional oceanography during the summer-fall transition, in particular (a) the zonal distribution of modified Circumpolar Deep Water exchange across the shelf break, (b) the upper ocean stratification across the Adélie Depression, including alongside iceberg C-28 that calved from the Mertz Glacier and (c) the convective overturning of the deep remnant seasonal mixed layer in Commonwealth Bay from sea ice growth (7.5-12.5 cm s-1). Heat and freshwater budgets to 200-300 m are used to estimate the ocean heat content, heat flux and sea ice growth rates. We speculate that the continuous foraging by the seals within Commonwealth Bay during the summer-fall transition was due to favorable feeding conditions resulting from the convective overturning of the deep seasonal mixed layer and chlorophyll maximum that is a reported feature of this location.

Diversity and distribution of deep-sea shrimps in the Ross Sea region of Antarctica.

PubMed

Basher, Zeenatul; Bowden, David A; Costello, Mark J

2014-01-01

Although decapod crustaceans are widespread in the oceans, only Natantia (shrimps) are common in the Antarctic. Because remoteness, depth and ice cover restrict sampling in the South Ocean, species distribution modelling is a useful tool for evaluating distributions. We used physical specimen and towed camera data to describe the diversity and distribution of shrimps in the Ross Sea region of Antarctica. Eight shrimp species were recorded: Chorismus antarcticus; Notocrangon antarcticus; Nematocarcinus lanceopes; Dendrobranchiata; Pasiphaea scotiae; Pasiphaea cf. ledoyeri; Petalidium sp., and a new species of Lebbeus. For the two most common species, N. antarcticus and N. lanceopes, we used maximum entropy modelling, based on records of 60 specimens and over 1130 observations across 23 sites in depths from 269 m to 3433 m, to predict distributions in relation to environmental variables. Two independent sets of environmental data layers at 0.05° and 0.5° resolution respectively, showed how spatial resolution affected the model. Chorismus antarcticus and N. antarcticus were found only on the continental shelf and upper slopes, while N. lanceopes, Lebbeus n. sp., Dendrobranchiata, Petalidium sp., Pasiphaea cf. ledoyeri, and Pasiphaea scotiae were found on the slopes, seamounts and abyssal plain. The environmental variables that contributed most to models for N. antarcticus were depth, chlorophyll-a concentration, temperature, and salinity, and for N. lanceopes were depth, ice concentration, seabed slope/rugosity, and temperature. The relative ranking, but not the composition of these variables changed in models using different spatial resolutions, and the predicted extent of suitable habitat was smaller in models using the finer-scale environmental layers. Our modelling indicated that shrimps were widespread throughout the Ross Sea region and were thus likely to play important functional role in the ecosystem, and that the spatial resolution of data needs to be considered both in the use of species distribution models.

Diversity and Distribution of Deep-Sea Shrimps in the Ross Sea Region of Antarctica

PubMed Central

Basher, Zeenatul; Bowden, David A.; Costello, Mark J.

2014-01-01

Although decapod crustaceans are widespread in the oceans, only Natantia (shrimps) are common in the Antarctic. Because remoteness, depth and ice cover restrict sampling in the South Ocean, species distribution modelling is a useful tool for evaluating distributions. We used physical specimen and towed camera data to describe the diversity and distribution of shrimps in the Ross Sea region of Antarctica. Eight shrimp species were recorded: Chorismus antarcticus; Notocrangon antarcticus; Nematocarcinus lanceopes; Dendrobranchiata; Pasiphaea scotiae; Pasiphaea cf. ledoyeri; Petalidium sp., and a new species of Lebbeus. For the two most common species, N. antarcticus and N. lanceopes, we used maximum entropy modelling, based on records of 60 specimens and over 1130 observations across 23 sites in depths from 269 m to 3433 m, to predict distributions in relation to environmental variables. Two independent sets of environmental data layers at 0.05° and 0.5° resolution respectively, showed how spatial resolution affected the model. Chorismus antarcticus and N. antarcticus were found only on the continental shelf and upper slopes, while N. lanceopes, Lebbeus n. sp., Dendrobranchiata, Petalidium sp., Pasiphaea cf. ledoyeri, and Pasiphaea scotiae were found on the slopes, seamounts and abyssal plain. The environmental variables that contributed most to models for N. antarcticus were depth, chlorophyll-a concentration, temperature, and salinity, and for N. lanceopes were depth, ice concentration, seabed slope/rugosity, and temperature. The relative ranking, but not the composition of these variables changed in models using different spatial resolutions, and the predicted extent of suitable habitat was smaller in models using the finer-scale environmental layers. Our modelling indicated that shrimps were widespread throughout the Ross Sea region and were thus likely to play important functional role in the ecosystem, and that the spatial resolution of data needs to be considered both in the use of species distribution models. PMID:25051333

A Saponification Method for Chlorophyll Removal from Microalgae Biomass as Oil Feedstock

PubMed Central

Li, Tao; Xu, Jin; Wu, Hualian; Wang, Guanghua; Dai, Shikun; Fan, Jiewei; He, Hui; Xiang, Wenzhou

2016-01-01

Microalgae oil is an optimal feedstock for nutraceutical, pharmaceutical and biodiesel production, but its high levels of chlorophyll limit its large-scale application. To date, few effective approaches have been developed to remove chlorophyll from microalgae oil. The main purpose of this study was to present a preprocessing method of algae oil feedstock (Scenedesmus) to remove chlorophyll by saponification. The results showed that 96% of chlorophyll in biomass was removed. High quality orange transparent oil could be extracted from the chlorophyll reduced biomass. Specifically, the proportion of neutral lipids and saturation levels of fatty acids increased, and the pigments composition became carotenoids-based. The critical parameters of chlorophyll reduced biodiesel conformed to the standards of the USA, China and EU. Sodium copper chlorophyllin could be prepared from the bleaching effluent. The results presented herein offer a useful pathway to improve the quality of microalgae oil and reduce the cost of microalgae biodiesel. PMID:27618070

Global Seasonal Climatologies of Ocean Chlorophyll: Blending In situ and Satellite Data for the CZCS Era

NASA Technical Reports Server (NTRS)

Gregg, Watson W.; Conkright, Margarita E.

1999-01-01

The historical archives of in situ (National Oceanographic Data Center) and satellite (Coastal Zone Color Scanner) chlorophyll data were combined using the blended analysis method of Reynolds [1988] in an attempt to construct an improved climatological seasonal representation of global chlorophyll distributions. The results of the blended analysis differed dramatically from the CZCS representation: global chlorophyll estimates increased 8-35% in the blended analysis depending upon season. Regional differences were even larger, up to 140% in the equatorial Indian Ocean in summer (during the southwest monsoon). Tropical Pacific chlorophyll values increased 25-41%. The results suggested that the CZCS generally underestimates chlorophyll. Regional and seasonal differences in the blended analysis were sufficiently large as to produce a different representation of global chlorophyll distributions than otherwise inferred from CZCS data alone. Analyses of primary production and biogeochemical cycles may be substantially impacted by these results.

A Saponification Method for Chlorophyll Removal from Microalgae Biomass as Oil Feedstock.

PubMed

Li, Tao; Xu, Jin; Wu, Hualian; Wang, Guanghua; Dai, Shikun; Fan, Jiewei; He, Hui; Xiang, Wenzhou

2016-09-07

Microalgae oil is an optimal feedstock for nutraceutical, pharmaceutical and biodiesel production, but its high levels of chlorophyll limit its large-scale application. To date, few effective approaches have been developed to remove chlorophyll from microalgae oil. The main purpose of this study was to present a preprocessing method of algae oil feedstock (Scenedesmus) to remove chlorophyll by saponification. The results showed that 96% of chlorophyll in biomass was removed. High quality orange transparent oil could be extracted from the chlorophyll reduced biomass. Specifically, the proportion of neutral lipids and saturation levels of fatty acids increased, and the pigments composition became carotenoids-based. The critical parameters of chlorophyll reduced biodiesel conformed to the standards of the USA, China and EU. Sodium copper chlorophyllin could be prepared from the bleaching effluent. The results presented herein offer a useful pathway to improve the quality of microalgae oil and reduce the cost of microalgae biodiesel.

A novel chlorophyll solar cell

NASA Astrophysics Data System (ADS)

Ludlow, J. C.

The photosynthetic process is reviewed in order to produce a design for a chlorophyll solar cell. In a leaf, antenna chlorophyll absorbs light energy and conducts it to an energy trap composed of a protein and two chlorophyll molecules, which perform the oxidation-reduction chemistry. The redox potential of the trap changes from 0.4 to -0.6 V, which is sufficient to reduce nearby molecules with redox potentials in that range. The reduction occurs by transfer of an electron, and a chlorophyll solar cell would direct the transferred electron to a current carrier. Chlorophyll antenna and traps are placed on a metallic support immersed in an electron acceptor solution, and resulting electrons from exposure to light are gathered by a metallic current collector. Spinach chlorophyll extracted, purified, and applied in a cell featuring a Pt collector and an octane water emulsion resulted in intensity independent voltages.

Chlorophyll Catabolites – Chemical and Structural Footprints of a Fascinating Biological Phenomenon

PubMed Central

Moser, Simone; Müller, Thomas; Oberhuber, Michael; Kräutler, Bernhard

2009-01-01

Twenty years ago, the molecular basis for the seasonal disappearance of chlorophyll was still enigmatic. In the meantime, our knowledge on chlorophyll breakdown has grown considerably. As outlined here, it has been possible to decipher the basic transformations involved in natural chlorophyll breakdown by identification of chlorophyll catabolites in higher plants, and with the help of the synthesis of (putative) catabolic intermediates. In vascular plants, chlorophyll breakdown typically converts the green plant pigments efficiently into colorless and non-fluorescent tetrapyrroles. It involves colored intermediates only fleetingly and in an (elusive) enzyme-bound form. The non-fluorescent chlorophyll catabolites accumulate in the vacuoles of degreened leaves and are considered the products, primarily, of a detoxification process. However, they are effective antioxidants, and may thus also have physiologically beneficial chemical properties.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2009) PMID:21037946

A study on distribution of chlorophyll-a in the coastal waters of Anzali Port, south Caspian Sea

NASA Astrophysics Data System (ADS)

Jamshidi, S.; Abu Bakar, N. Bin

2011-02-01

Phytoplankton as chlorophyll-containing organisms is the first step of production in most marine processes and food chains. Nutrient enhancement in the seawater due to the discharge of agricultural, industrial, and urban wastes threatens the Caspian Sea environment. Increasing concentrations of chlorophyll-a in seawater, in reaction to the elevation of nutrient supply can have severely damaging effects on the marine environment of the Caspian. In this research, seasonal variability of the chlorophyll-a concentrations in the western part of the southern coastal waters of the Caspian Sea near Iranian coast was examined using field observations. The data showed that the most chlorophyll-a was found below the sea surface. The thermal stratification in water column and outflow of the Anzali Lagoon affect the chlorophyll-a concentrations in the region. Concentrations of chlorophyll-a were recorded in midsummer in a range of 0.2-3.4 mg m-3.

Synthesis of zinc chlorophyll materials for dye-sensitized solar cell applications

NASA Astrophysics Data System (ADS)

Erten-Ela, Sule; Vakuliuk, Olena; Tarnowska, Anna; Ocakoglu, Kasim; Gryko, Daniel T.

2015-01-01

To design sensitizers for dye sensitized solar cells (DSSCs), a series of zinc chlorins with different substituents were synthesized. Novel zinc methyl 3-devinyl-3-hydroxymethyl-20-phenylacetylenylpyropheophorbide-a (ZnChl-1), zinc methyl 20-bromo-3-devinyl-3-hydroxymethylpyropheophorbide-a (ZnChl-2), zinc methyl 3-devinyl-3-hydroxymethyl-pyropheophorbide-a (ZnChl-3), zinc propyl 3-devinyl-3-hydroxymethyl-pyropheophorbide-a (ZnChl-4) were synthesized and their photovoltaic performances were evaluated in dye-sensitized solar cells. Photoelectrodes with a 7 μm thick nanoporous layer and a 5 μm thick light-scattering layer were used to fabricate dye sensitized solar cells. The best efficiency was obtained with ZnChl-2 sensitizer. ZnChl-2 gave a Jsc of 3.5 mA/cm2, Voc of 412 mV, FF of 0.56 and an overall conversion efficiency of 0.81 at full sun (1000 W m-2).

Calibrations between chlorophyll meter values and chlorophyll contents vary as the result of differences in leaf structure

USDA-ARS?s Scientific Manuscript database

In order to relate leaf chlorophyll meter values with total leaf chlorophyll contents (µg cm-2), calibration equations are established with measured data on leaves. Many studies have documented differences in calibration equations using different species and using different growing conditions for th...

A review of ocean chlorophyll algorithms and primary production models

NASA Astrophysics Data System (ADS)

Li, Jingwen; Zhou, Song; Lv, Nan

2015-12-01

This paper mainly introduces the five ocean chlorophyll concentration inversion algorithm and 3 main models for computing ocean primary production based on ocean chlorophyll concentration. Through the comparison of five ocean chlorophyll inversion algorithm, sums up the advantages and disadvantages of these algorithm,and briefly analyzes the trend of ocean primary production model.

Modeling the relationship between extractable chlorophyll and SPAD-502 readings for endangered plant species research

Treesearch

Tracy S. Hawkins; Emile S. Gardiner; Greg S. Comer

2009-01-01

Handheld chlorophyll meters have proven to be useful tools for rapid, nondestructive assessment of chlorophyll and nutrient status in various agricultural and arborescent plant species. We proposed that a SPAD-502 chlorophyll meter would provide valuable information when monitoring life cycle changes and intraspecific variation in...

Overexpression of Protochlorophyllide Oxidoreductase C Regulates Oxidative Stress in Arabidopsis

PubMed Central

Pattanayak, Gopal K.; Tripathy, Baishnab C.

2011-01-01

Light absorbed by colored intermediates of chlorophyll biosynthesis is not utilized in photosynthesis; instead, it is transferred to molecular oxygen, generating singlet oxygen (1O2). As there is no enzymatic detoxification mechanism available in plants to destroy 1O2, its generation should be minimized. We manipulated the concentration of a major chlorophyll biosynthetic intermediate i.e., protochlorophyllide in Arabidopsis by overexpressing the light-inducible protochlorophyllide oxidoreductase C (PORC) that effectively phototransforms endogenous protochlorophyllide to chlorophyllide leading to minimal accumulation of the photosensitizer protochlorophyllide in light-grown plants. In PORC overexpressing (PORCx) plants exposed to high-light, the 1O2 generation and consequent malonedialdehyde production was minimal and the maximum quantum efficiency of photosystem II remained unaffected demonstrating that their photosynthetic apparatus and cellular organization were intact. Further, PORCx plants treated with 5-aminolevulinicacid when exposed to light, photo-converted over-accumulated protochlorophyllide to chlorophyllide, reduced the generation of 1O2 and malonedialdehyde production and reduced plasma membrane damage. So PORCx plants survived and bolted whereas, the 5-aminolevulinicacid-treated wild-type plants perished. Thus, overexpression of PORC could be biotechnologically exploited in crop plants for tolerance to 1O2-induced oxidative stress, paving the use of 5-aminolevulinicacid as a selective commercial light-activated biodegradable herbicide. Reduced protochlorophyllide content in PORCx plants released the protochlorophyllide-mediated feed-back inhibition of 5-aminolevulinicacid biosynthesis that resulted in higher 5-aminolevulinicacid production. Increase of 5-aminolevulinicacid synthesis upregulated the gene and protein expression of several downstream chlorophyll biosynthetic enzymes elucidating a regulatory net work of expression of genes involved in 5-aminolevulinicacid and tetrapyrrole biosynthesis. PMID:22031838