An objective daily Weather Type classification for Iberia since 1850; patterns, trends, variability and impact in precipitation

NASA Astrophysics Data System (ADS)

Ramos, A. M.; Trigo, R. M.; Lorenzo, M. N.; Vaquero, J. M.; Gallego, M. C.; Valente, M. A.; Gimeno, L.

2009-04-01

In recent years a large number of automated classifications of atmospheric circulation patterns have been published covering the entire European continent or specific sub-regions (Huth et al., 2008). This generalized use of objective classifications results from their relatively straightforward computation but crucially from their capacity to provide simple description of typical synoptic conditions as well as their climatic and environmental impact. For this purpose, the vast majority of authors has employed the Reanalyses datasets, namely from either NCEP/NCAR or ECMWF projects. However, both these widely used datasets suffer from important caveats, namely their restricted temporal coverage, that is limited to the last six decades (NCEP/NCAR since 1948 and ECMWF since 1958). This limitation has been partially mitigated by the recent availability of continuous daily mean sea level pressure obtained within the European project EMULATE, that extended the historic records over the extra-tropical Atlantic and Europe (70°-25° N by 70° W-50° E), for the period 1850 to the present (Ansell, T. J. et al. 2006). Here we have used the extended EMULATE dataset to construct an automated version of the Lamb Weather type (WTs) classification scheme (Jones et al 1993) adapted for the center of the Iberian Peninsula. We have identified 10 basic WTs (Cyclonic, Anticyclonic and 8 directional types) following a similar methodology to that previously adopted by Trigo and DaCamara, 2000 (for Portugal) and Lorenzo et al. 2008 (for Galicia, northwestern Iberia). We have evaluated trends of monthly/seasonal frequency of each WT for the entire period and several shorter periods. Finally, we use the long-term precipitation time series from Lisbon (recently digitized) and Cadiz (southern Spain) to evaluate, the impact of each WT on the precipitation regime. It is shown that the Anticyclonic (A) type, although being the most frequent class in winter, gives a rather small contribution to the winter precipitation amount, observed on a daily basis. On the other hand, the three wettest WTs, namely the Cyclonic (C), South-westerly (SW) and Westerly (W) types, together representing roughly a third of all winter days, do account for more than 60% of the observed daily precipitation. It is shown that the large inter-annual variability of precipitation in both cities is highly related with the corresponding inter-annual variability of the wet WTs. Ansell, T. J. et al. (2006) Daily mean sea level pressure reconstructions for the European - North Atlantic region for the period 1850-2003, Journal of Climate, 19, 2717-2742, doi: 10.1175/JCLI3775.1 Huth R., Beck C., Philipp A., Demuzere M, Ustrnul Z, Cahynová M., Kyselý J., Tveito O.E. (2008) Classifications of atmospheric circulation patterns: recent advances and applications. Trends and Directions in Climate Research: Ann. N.Y. Acad. Sci. 1146:, 105-152 Jones, P. D. , M. Hulme , K. R. Briffa. (1993) A comparison of Lamb circulation types with an objective classification scheme. Int. J. Climatol. 13: 655- 663. Lorenzo M.N., Taboada J.J. and Gimeno L. (2008) Links between circulation weather types and teleconnection patterns and their influence on precipitation patterns in Galicia (NW Spain). Int. J. Climatol. Published Online: Nov 12 2007 5:30AM DOI: 10.1002/joc.1646. Trigo R.M. and Da Camara C.C. (2000) Circulation weather types and their influence on the precipitation regime in Portugal. Int. J. Climatol., 20, 1559-1581.

Inter-comparison of weather and circulation type classifications for hydrological drought development

NASA Astrophysics Data System (ADS)

Fleig, Anne K.; Tallaksen, Lena M.; Hisdal, Hege; Stahl, Kerstin; Hannah, David M.

Classifications of weather and circulation patterns are often applied in research seeking to relate atmospheric state to surface environmental phenomena. However, numerous procedures have been applied to define the patterns, thus limiting comparability between studies. The COST733 Action “ Harmonisation and Applications of Weather Type Classifications for European regions” tests 73 different weather type classifications (WTC) and their associate weather types (WTs) and compares the WTCs’ utility for various applications. The objective of this study is to evaluate the potential of these WTCs for analysis of regional hydrological drought development in north-western Europe. Hydrological drought is defined in terms of a Regional Drought Area Index (RDAI), which is based on deficits derived from daily river flow series. RDAI series (1964-2001) were calculated for four homogeneous regions in Great Britain and two in Denmark. For each region, WTs associated with hydrological drought development were identified based on antecedent and concurrent WT-frequencies for major drought events. The utility of the different WTCs for the study of hydrological drought development was evaluated, and the influence of WTC attributes, i.e. input variables, number of defined WTs and general classification concept, on WTC performance was assessed. The objective Grosswetterlagen (OGWL), the objective Second-Generation Lamb Weather Type Classification (LWT2) with 18 WTs and two implementations of the objective Wetterlagenklassifikation (WLK; with 40 and 28 WTs) outperformed all other WTCs. In general, WTCs with more WTs (⩾27) were found to perform better than WTCs with less (⩽18) WTs. The influence of input variables was not consistent across the different classification procedures, and the performance of a WTC was determined primarily by the classification procedure itself. Overall, classification procedures following the relatively simple general classification concept of predefining WTs based on thresholds, performed better than those based on more sophisticated classification concepts such as deriving WTs by cluster analysis or artificial neural networks. In particular, PCA based WTCs with 9 WTs and automated WTCs with a high number of predefined WTs (subjectively and threshold based) performed well. It is suggested that the explicit consideration of the air flow characteristics of meridionality, zonality and cyclonicity in the definition of WTs is a useful feature for a WTC when analysing regional hydrological drought development.

Interannual drought index variations in Central Europe related to large-scale atmospheric circulation

NASA Astrophysics Data System (ADS)

Beck, Christoph; Philipp, Andreas; Jacobeit, Jucundus

2014-05-01

This contribution investigates the relationship between large-scale atmospheric circulation and interannual variations of the standardized precipitation index (SPI) in central Europe. To this end occurrence frequencies of circulation types (CT) derived from a variety of circulation type classifications (CTC) applied to daily sea level pressure (SLP) data and mean circulation indices of vorticity (V), zonality (Z) and meridionality (M) have been utilized as predictors within multiple regression models (MRM) for the estimation of gridded 3-month SPI values over central Europe for the period 1950 to 2010. CTC based MRMs used in the analyses comprise variants concerning the basic method for CT classification, the number of CTs, the size and location of the spatial domain used for CTCs and the exclusive use of CT frequencies or the combined use of CT frequencies and mean circulation indices as predictors. Adequate MRM predictor combinations have been identified by applying stepwise multiple regression analyses within a resampling framework. The performance (robustness) of the resulting MRMs has been quantified based on a leave-one out cross-validation procedure applying several skill scores. Furthermore the relative importance of individual predictors has been estimated for each MRM. From these analyses it can be stated that i.) the consideration of vorticity characteristics within CTCs, ii.) a relatively small size of the spatial domain to which CTCs are applied and iii.) the inclusion of mean circulation indices appear to improve model skill. However model skill exhibits distinct variations between seasons and regions. Whereas promising skill can be stated for the western and northwestern parts of the central European domain only unsatisfactorily skill is reached in the more continental regions and particularly during summer. Thus it can be concluded that the here presented approaches feature the potential for the downscaling of central European drought index variations from large-scale circulation at least for some regions. Further improvements of CTC based approaches may be expected from the optimization of CTCs for explaining the SPI e.g. via the inclusion of additional variables into the classification procedure.

Ultrastructures and classification of circulating hemocytes in 9 botryllid ascidians (chordata: ascidiacea).

PubMed

Hirose, Euichi; Shirae, Maki; Saito, Yasunori

2003-05-01

Ultrastructures of circulating hemocytes were studied in 9 botryllid ascidians. The hemocytes are classified into five types: hemoblasts, phagocytes, granulocytes, morula cells, and pigment cells. These five types are always found in the 9 species. They should represent the major hemocyte types of the circulating cells in the blood. Hemoblasts are small hemocytes having a high nucleus/cytoplasm ratio. There are few granular or vacuolar inclusions in the cytoplasm. Phagocytes have phagocytic activity and their shape is variable depending on the amount of engulfed materials. In granulocytes, shape and size of granules are different among the species. Morula cells are characterized by several vacuoles filled with electron dense materials. In pigment cells, the bulk of the cytoplasm is occupied by one or a few vacuoles containing pigment granules. We also described some other hemocyte types found in particular species. Furthermore, we encountered free oocytes circulating in the blood in two species, Botryllus primigenus and Botrylloides lentus.

Circulation types related to lightning activity over Catalonia and the Principality of Andorra

NASA Astrophysics Data System (ADS)

Pineda, N.; Esteban, P.; Trapero, L.; Soler, X.; Beck, C.

In the present study, we use a Principal Component Analysis (PCA) to characterize the surface 6-h circulation types related to substantial lightning activity over the Catalonia area (north-eastern Iberia) and the Principality of Andorra (eastern Pyrenees) from January 2003 to December 2007. The gridded data used for classification of the circulation types is the NCEP Final Analyses of the Global Tropospheric Analyses at 1° resolution over the region 35°N-48°N by 5°W-8°E. Lightning information was collected by the SAFIR lightning detection system operated by the Meteorological Service of Catalonia (SMC), which covers the region studied. We determined nine circulation types on the basis of the S-mode orthogonal rotated Principal Component Analysis. The “extreme scores” principle was used previous to the assignation of all cases, to obtain the number of final types and their centroids. The distinct differences identified in the resulting mean Sea Level Pressure (SLP) fields enabled us to group the types into three main patterns, taking into account their scale/dynamical origin. The first group of types shows the different distribution of the centres of action at synoptic scale associated with the occurrence of lightning. The second group is connected to mesoscale dynamics, mainly induced by the relief of the Pyrenees. The third group shows types with low gradient SLP patterns in which the lightning activity is a consequence of thermal dynamics (coastal and mountain breezes). Apart from reinforcing the consistency of the groups obtained, analysis of the resulting classification improves our understanding of the geographical distribution and genesis factors of thunderstorm activity in the study area, and provides complementary information for supporting weather forecasting. Thus, the catalogue obtained will provide advances in different climatological and meteorological applications, such as nowcasting products or detection of climate change trends.

Relationship between atmospheric circulation weather types and seasonal precipitation in Serbia

NASA Astrophysics Data System (ADS)

Putniković, Suzana; Tošić, Ivana

2017-04-01

An automated version of the Lamb weather type classification scheme was used to classify daily circulation types over Serbia. The synoptic characteristics of 26 weather types and their relative frequencies are discussed for spring and autumn, complementing research previously published by Putniković et al. (Meteorol Atmos Phys 128:649-662, 2016) for winter and summer. Trends of the circulation types are presented, as well as precipitation trends during the period 1961-2010. Precipitation was modeled by the stepwise regression at six stations, defining weather types as independent variables. The anticyclonic (A) type is the most frequent class occurring in autumn (23.87%), displaying a positive trend for spring and significant negative trend for autumn. The frequencies of anticyclonic and cyclonic (C) types are almost the same for spring: 14.33 and 14.02%, respectively. The C type shows a significant negative trend only in spring. The increasing trend of the frequency of the C types and decreasing trend of the A types are in agreement with the increasing trend of precipitation in Serbia during autumn. Results suggest that the C type affects precipitation occurrence over most of the country, while the remaining 25 types provide more negligible or regional contributions to precipitation.

Large-scale circulation classification and its links to observed precipitation in the eastern and central Tibetan Plateau

NASA Astrophysics Data System (ADS)

Liu, Wenbin; Wang, Lei; Chen, Deliang; Tu, Kai; Ruan, Chengqing; Hu, Zengyun

2016-06-01

The relationship between the large-scale circulation dynamics and regional precipitation regime in the Tibetan Plateau (TP) has so far not been well understood. In this study, we classify the circulation types using the self-organizing maps based on the daily field of 500 hPa geopotential height and link them to the precipitation climatology in the eastern and central TP. By virtue of an objective determining method, 18 circulation types are quantified. The results show that the large amount of precipitation in summer is closely related to the circulation types in which the enhanced and northward shifted subtropical high (SH) over the northwest Pacific and the obvious cyclconic circulation anomaly over the Bay of Bengal are helpful for the Indian summer monsoon and East Asian summer monsoon to take abundant low-latitude moisture to the eastern and southern TP. On the contrary, the dry winter in the central and eastern Tibet corresponds to the circulation types with divergence over the central and eastern TP and the water vapor transportations of East Asian winter monsoon and mid-latitude westerly are very weak. Some circulation types are associated with some well-known circulation patterns/monsoons influencing the TP (e.g. East Atlantic Pattern, El Niño Southern Oscillation, Indian Summer Monsoon and the mid-latitude westerly), and exhibit an overall good potential for explaining the variability of regional seasonal precipitation. Moreover, the climate shift signals in the late 1970s over the eastern Pacific/North Pacific Oceans could also be reflected by both the variability of some circulation types and their correspondingly composite precipitations. This study extends our understandings for the large-scale atmospheric dynamics and their linkages with regional precipitation and is beneficial for the climate change projection and related adaptation activities in the highest and largest plateau in the world.

Future Changes in Autumn Flood Type and Frequency in Pacific Northwest North America

NASA Astrophysics Data System (ADS)

Menounos, B.; Cannon, A. J.; Radic, V.; Moore, R. D.; Dery, S. J.; Jackson, P. L.; Anslow, F. S.

2013-12-01

During the 20th and early 21st century, autumn storms in the Pacific Northwest of North America - PNWNA (coastal British Columbia and Washington) caused widespread flooding and landslides. Understanding how these intense storms are likely to change in the future is important given their potential to harm people and cause widespread damage, but assessing these changes using climate models is difficult. Parameterization of precipitation in general circulation and regional climate models (GCM, RCM) is prone to error, especially in the mountainous terrain of the PNWNA. High computational demands of RCMs also limits their use in assessing changes in flood type and frequency for a suite of GCM and emission scenarios. We instead focus our efforts on understanding atmospheric circulation patterns responsible for historical autumn flooding (15 August - 31 December) and examine how these synoptic conditions are likely to change under future emission scenarios. Our analysis includes identification of extreme events (runoff and precipitation) in streamflow and precipitation records from coastal Washington and British Columbia for the period 1948-2010. Our methods to link the instrumental record of extreme autumn events to atmospheric conditions (500 and 850 hPa geopotential height and integrated vapor transport obtained from NCEP and CFSR reanalysis) include: (1) compositing of streamflow and precipitation events (environment-to-circulation); (2) self organizing map synoptic classification (circulation-to-environment); and (3) regression tree synoptic classification (hybrid of environment-to-circulation and circulation-to-environment). We then evaluate changes in flood-generating synoptic types in the CMIP5 ensemble over the period 2010-2100. Our analysis indicates that, as expected, most floods are associated with atmospheric river events that are commonly associated with upper level, quasi stationary low- and high-pressure systems respectively located in the Gulf of Alaska and east of the PNWNA. Based on our initial analysis of the CMIP5 data, we note an increase in autumn flood-producing synoptic weather types for the PNWNA. We discuss the implications of increased autumn flooding to communities and infrastructure.

Weather Type classification over Chile; patterns, trends, and impact in precipitation and temperature

NASA Astrophysics Data System (ADS)

Frias, T.; Trigo, R. M.; Garreaud, R.

2009-04-01

The Andes Cordillera induces considerable disturbances on the structure and evolution of the pressure systems that influences South America. Different weather types for southern South America are derived from the daily maps of geopotential height at 850hPa corresponding to a 42 year period, spanning from 1958 to 2000. Here we have used the ECWMF ERA-40 reanalysis dataset to construct an automated version of the Lamb Weather type (WTs) classification scheme (Jones et al., 1993) developed for the UK. We have identified 8 basic WTs (Cyclonic, Anticyclonic and 6 main directional types) following a similar methodology to that previously adopted by Trigo and DaCamara, 2000 (for Iberia). This classification was applied to two regions of study (CLnorth and CLsouth) which differ 20° in latitude, so that the vast Chile territory could be covered. Then were assessed the impact of the occurrence of this weather types in precipitation in Chile, as well as in the distribution of precipitation and temperature fields (reanalysis data) in southern half of South America. The results allow to conclude that the precipitation in central region of Chile is largely linked with the class occurrence (concerning CLnorth) of cyclonic circulation and of West quadrant (SW, W and NW), despite of it's relatively low frequency. In CLsouth, for its part, it is verified that the most frequent circulation is from the west quadrant, although the associated amount of rainfall is lower than in CLnorth. There was also a general decrease of precipitation at local weather stations chosen in the considered period of study, particularly in austral winter.

Enriching User-Oriented Class Associations for Library Classification Schemes.

ERIC Educational Resources Information Center

Pu, Hsiao-Tieh; Yang, Chyan

2003-01-01

Explores the possibility of adding user-oriented class associations to hierarchical library classification schemes. Analyses a log of book circulation records from a university library in Taiwan and shows that classification schemes can be made more adaptable by analyzing circulation patterns of similar users. (Author/LRW)

Weather types and the regime of wildfires in Portugal

NASA Astrophysics Data System (ADS)

Pereira, M. G.; Trigo, R. M.; Dacamara, C. C.

2009-04-01

An objective classification scheme, as developed by Trigo and DaCamara (2000), was applied to classify the daily atmospheric circulation affecting Portugal between 1980 and 2007 into a set of 10 basic weather types (WTs). The classification scheme relies on a set of atmospheric circulation indices, namely southerly flow (SF), westerly flow (WF), total flow (F), southerly shear vorticity (ZS), westerly shear vorticity (ZW) and total vorticity (Z). The weather-typing approach, together with surfacemeteorological variables (e.g. intensity and direction of geostrophic wind, maximum and minimum temperature and precipitation) were then associated to wildfire events as recorded in the official Portuguese fire database consisting of information on each fire occurred in the 18 districts of Continental Portugal within the same period (>450.000 events). The objective of this study is to explore the dependence of wildfire activity on weather and climate and then evaluate the potential of WTs to discriminate among recorded wildfires on what respects to their occurrence and development. Results show that days characterised by surface flow with an eastern component (i.e. NE, E and SE) account for a high percentage of daily burnt area, as opposed to surface westerly flow (NW, W and SW), which represents about a quarter of the total number of days but only accounts for a very low percentage of active fires and of burnt area. Meteorological variables such as minimum and maximum temperatures, that are closely associated to surface wind intensity and direction, also present a good ability to discriminate between the different types of fire events.. Trigo R.M., DaCamara C. (2000) "Circulation Weather Types and their impact on the precipitation regime in Portugal". Int J of Climatology, 20, 1559-1581.

Trends in winter circulation over the British Isles and central Europe in twenty-first century projections by 25 CMIP5 GCMs

NASA Astrophysics Data System (ADS)

Stryhal, Jan; Huth, Radan

2018-03-01

Winter midlatitude atmospheric circulation has been extensively studied for its tight link to surface weather, and automated circulation classifications have often been used to this end. Here, eight such classifications are applied to daily sea level pressure patterns simulated by an ensemble of CMIP5 GCMs twenty-first century projections for the British Isles and central Europe in order to robustly estimate future changes in frequency, persistence, and strength of synoptic-scale circulation there. All methods are able to identify present-day biases of models reported before, such as an overestimated occurrence of zonal flow and underestimation of anticyclonic conditions and easterly advection, although the strength of these biases varies among the methods. In future, models show that the zonal flow will become more frequent while the strength of the mean flow is not projected to change. Over the British Isles, the models that better simulate the latitude of zonal flow over the historical period indicate a slight equatorward shift of westerlies in their projections, while the poleward expansion of circulation—expected in future at global scale—is apparent in those models that have large errors. Over central Europe, some classifications indicate an increase in persistence and especially in frequency of anticyclonic types, which is, however, shown to be rather an artifact of some methods than a real feature. On the other hand, the easterly flow is robustly projected to become markedly weaker in central Europe, which we hypothesize might be an important factor contributing to the projected decrease of cold extremes there.

Instabilities in the relation between European Weather Types and mid-latitude circulation in the Atlantic

NASA Astrophysics Data System (ADS)

Alvarez Castro, Maria del Carmen; Gallego, David; Trigo, Ricardo M.; García-Herrera, Ricardo; Ribera, Pedro

2015-04-01

Recently, a new instrumental index (Westerly Index or "WI") measuring the frequency of the westerlies over the English Channel has been developed for the period 1685-1750 (Wheeler et al. 2009) and further extended to the present (Barriopedro et al. 2014). This index holds a climatic signal similar to the North Atlantic Oscillation (NAO) in the temperature and precipitation over large areas of Europe. Nevertheless we are confident that the WI offers two major advantages: first the WI signatures are not restricted to the winter being significant during the entire year and second, the WI does not rely on proxy data and, as such, it is less prone to the uncertainties associated to the calibration process of the NAO reconstructions. During the last decades, regional mid-latitude circulation has also been quantified objectively through the widespread use of so-called Weather Types (WT). WT are used to identify and classify the different patterns of Sea Level Pressure configurations originating particular weather in a given area. In consequence, WT over most Western Europe should be closely related to atmospheric circulation indexes such as the WI. Here we adopted a similar WT classification of the classical WTs developed empirically by Hubert Lamb for the UK and automated by Jones et al. (1993) but centered at the English Channel latitudinal band to be compatible with the window used to define the WI (Wheeler et al., 2009). In this work we compare the long-term (1850-2003) monthly values of WI with the corresponding monthly frequency of directional weather types in the WI area. As expected, we found significant positive (negative) correlation values with WTs dominated by a westerly (easterly) component but interestingly, some quasi periodic intervals of lack of correlation have been found, suggesting an oscillating behaviour on the lack of stationarity between the large-scale north Atlantic circulation and local weather types. Wheeler, D.; García-Herrera, R.; Wilkinson, C.W. and Ward, C., 2009: Atmospheric circulation and storminess derived from Royal Navy logbooks: 1685 to 1750, Climatic Change, DOI: 10.1007/s10584-009-9732-x Barriopedro, D.; Gallego, D.; Alvarez-Castro, M.C.; Garcia-Herrera, R.; Wheeler, D.; Peña-Ortiz, C.; Barbosa, S.M.,2014: Witnessing North Atlantic westerlies variability from ships' logbooks (1685-2008). Clim Dym, 43, 939-955 Jones, P. D., Hulme, M., and Briffa, K. R. 1993: A comparison of Lamb circulation types with an objective classification scheme, Int. J. Climatol., 13, 655-663.

Genetic diversity of avian paramyxovirus type 1: Proposal for a unified nomenclature and classification system of Newcastle disease virus genotypes

USDA-ARS?s Scientific Manuscript database

Genetically diverse Newcastle disease virus (NDV) isolates circulate and cause disease in different geographic locations of the world. The differences found on the genome of distinct NDV isolates have been used to classify different isolates into genetic groups called genotypes or lineages. Both l...

Classification of hydrocephalus: critical analysis of classification categories and advantages of "Multi-categorical Hydrocephalus Classification" (Mc HC).

PubMed

Oi, Shizuo

2011-10-01

Hydrocephalus is a complex pathophysiology with disturbed cerebrospinal fluid (CSF) circulation. There are numerous numbers of classification trials published focusing on various criteria, such as associated anomalies/underlying lesions, CSF circulation/intracranial pressure patterns, clinical features, and other categories. However, no definitive classification exists comprehensively to cover the variety of these aspects. The new classification of hydrocephalus, "Multi-categorical Hydrocephalus Classification" (Mc HC), was invented and developed to cover the entire aspects of hydrocephalus with all considerable classification items and categories. Ten categories include "Mc HC" category I: onset (age, phase), II: cause, III: underlying lesion, IV: symptomatology, V: pathophysiology 1-CSF circulation, VI: pathophysiology 2-ICP dynamics, VII: chronology, VII: post-shunt, VIII: post-endoscopic third ventriculostomy, and X: others. From a 100-year search of publication related to the classification of hydrocephalus, 14 representative publications were reviewed and divided into the 10 categories. The Baumkuchen classification graph made from the round o'clock classification demonstrated the historical tendency of deviation to the categories in pathophysiology, either CSF or ICP dynamics. In the preliminary clinical application, it was concluded that "Mc HC" is extremely effective in expressing the individual state with various categories in the past and present condition or among the compatible cases of hydrocephalus along with the possible chronological change in the future.

The Aleutian Low and Winter Climatic Conditions in the Bering Sea. Part I: Classification

NASA Astrophysics Data System (ADS)

Rodionov, S. N.; Overland, J. E.; Bond, N. A.

2005-01-01

The Aleutian low is examined as a primary determinant of surface air temperature (SAT) variability in the Bering Sea during the winter (December-January-February-March (DJFM)) months. The Classification and Regression Tree (CART) method is used to classify five types of atmospheric circulation for anomalously warm months (W1-W5) and cold months (C1-C5). For the Bering Sea, changes in the position of the Aleutian low are shown to be more important than changes in its central pressure. The first two types, W1 and C1, account for 51% of the "warm" and 37% of the "cold" months. The W1-type pattern is characterized by the anomalously deep Aleutian low shifted west and north of its mean position. In this situation, an increased cyclonic activity occurs in the western Bering Sea. The C1-type pattern represents a split Aleutian low with one center in the northwestern Pacific and the other in the Gulf of Alaska. The relative frequency of the W1 to C1 types of atmospheric circulation varies on decadal time scales, which helps to explain the predominance of fluctuations on these time scales in the weather of the Bering Sea. Previous work has noted the prominence of multidecadal variability in the North Pacific. The present study finds multidecadal variations in frequencies of the W3 and C3 patterns, both of which are characterized by increased cyclonic activity south of 51°N. In general, the CART method is found to be a suitable means for characterizing the wintertime atmospheric circulation of the North Pacific in terms of its impact on the Bering Sea. The results show that similar pressure anomaly patterns for the North Pacific as a whole can actually result in different conditions for the Bering Sea, and that similar weather conditions in the Bering Sea can arise from decidedly different large-scale pressure patterns.

Winter circulation weather types and hospital admissions for respiratory diseases in Galicia, Spain

NASA Astrophysics Data System (ADS)

Royé, D.; Taboada, J. J.; Martí, A.; Lorenzo, M. N.

2016-04-01

The link between various pathologies and atmospheric conditions has been a constant topic of study over recent decades in many places across the world; knowing more about it enables us to pre-empt the worsening of certain diseases, thereby optimizing medical resources. This study looked specifically at the connections in winter between respiratory diseases and types of atmospheric weather conditions (Circulation Weather Types, CWT) in Galicia, a region in the north-western corner of the Iberian Peninsula. To do this, the study used hospital admission data associated with these pathologies as well as an automatic classification of weather types. The main result obtained was that weather types giving rise to an increase in admissions due to these diseases are those associated with cold, dry weather, such as those in the east and south-east, or anticyclonic types. A second peak was associated with humid, hotter weather, generally linked to south-west weather types. In the future, this result may help to forecast the increase in respiratory pathologies in the region some days in advance.

Winter circulation weather types and hospital admissions for respiratory diseases in Galicia, Spain.

PubMed

Royé, D; Taboada, J J; Martí, A; Lorenzo, M N

2016-04-01

The link between various pathologies and atmospheric conditions has been a constant topic of study over recent decades in many places across the world; knowing more about it enables us to pre-empt the worsening of certain diseases, thereby optimizing medical resources. This study looked specifically at the connections in winter between respiratory diseases and types of atmospheric weather conditions (Circulation Weather Types, CWT) in Galicia, a region in the north-western corner of the Iberian Peninsula. To do this, the study used hospital admission data associated with these pathologies as well as an automatic classification of weather types. The main result obtained was that weather types giving rise to an increase in admissions due to these diseases are those associated with cold, dry weather, such as those in the east and south-east, or anticyclonic types. A second peak was associated with humid, hotter weather, generally linked to south-west weather types. In the future, this result may help to forecast the increase in respiratory pathologies in the region some days in advance.

Rotavirus epidemiology and surveillance.

PubMed

Desselberger, U; Iturriza-Gómara, M; Gray, J J

2001-01-01

There is extensive antigenic and genomic diversity among co-circulating human rotaviruses. They are differentiated into groups, subgroups and types. There are at least 7 groups (A-G) and 4 subgroups within group A. To distinguish types within group A, a dual classification system has been established with the glycoprotein VP7 defining G types, and the protease-sensitive protein VP4 defining P types. At least 14 G types and more than 20 P types have been distinguished, of which at least 10 G types and at least 11 P types have been found in humans. Using the typing system, the complex molecular epidemiology of rotaviruses was investigated. Rotaviruses of different G and P types co-circulate. The main types found are G1P1A[8], G2P1B[4], G3P1A[8], G4P1A[8]; their relative incidence rates change over time in any one location and are different at the same time between different locations. Viruses with G/P constellations such as G1P1B[4] and G2P1A[8] are mostly natural reassortants of the co-circulating main virus types emerging after double infection of hosts. Viruses carrying G and or P types not represented in the four most common types, e.g. G8P[8], G1P[6] or G9P[6], could be introduced into the population by reassortment with animal viruses, or directly from animals or exotic human sources. Naturally circulating rotaviruses constantly undergo point mutations which can be used to classify lineages and sublineages within types. The full significance of human infections with group B and C rotaviruses remains to be established. Surveillance of rotavirus types in different parts of the world is essential to monitor the emergence of new types or of new G/P constellations which may predominate over time. The efficacy and effectiveness of any future rotavirus vaccine may differ depending on the predominant natural strain types. Detailed epidemiological and molecular surveillance data should be utilized to study the transmission dynamics of rotaviruses.

Initial Verification of GEOS-4 Aerosols Using CALIPSO and MODIS: Scene Classification

NASA Technical Reports Server (NTRS)

Welton, Ellsworth J.; Colarco, Peter R.; Hlavka, Dennis; Levy, Robert C.; Vaughan, Mark A.; daSilva, Arlindo

2007-01-01

A-train sensors such as MODIS and MISR provide column aerosol properties, and in the process a means of estimating aerosol type (e.g. smoke vs. dust). Correct classification of aerosol type is important because retrievals are often dependent upon selection of the right aerosol model. In addition, aerosol scene classification helps place the retrieved products in context for comparisons and analysis with aerosol transport models. The recent addition of CALIPSO to the A-train now provides a means of classifying aerosol distribution with altitude. CALIPSO level 1 products include profiles of attenuated backscatter at 532 and 1064 nm, and depolarization at 532 nm. Backscatter intensity, wavelength ratio, and depolarization provide information on the vertical profile of aerosol concentration, size, and shape. Thus similar estimates of aerosol type using MODIS or MISR are possible with CALIPSO, and the combination of data from all sensors provides a means of 3D aerosol scene classification. The NASA Goddard Earth Observing System general circulation model and data assimilation system (GEOS-4) provides global 3D aerosol mass for sulfate, sea salt, dust, and black and organic carbon. A GEOS-4 aerosol scene classification algorithm has been developed to provide estimates of aerosol mixtures along the flight track for NASA's Geoscience Laser Altimeter System (GLAS) satellite lidar. GLAS launched in 2003 and did not have the benefit of depolarization measurements or other sensors from the A-train. Aerosol typing from GLAS data alone was not possible, and the GEOS-4 aerosol classifier has been used to identify aerosol type and improve the retrieval of GLAS products. Here we compare 3D aerosol scene classification using CALIPSO and MODIS with the GEOS-4 aerosol classifier. Dust, smoke, and pollution examples will be discussed in the context of providing an initial verification of the 3D GEOS-4 aerosol products. Prior model verification has only been attempted with surface mass comparisons and column optical depth from AERONET and MODIS.

Circulating monoclonal immunoglobulins in Sjögren syndrome: prevalence and clinical significance in 237 patients.

PubMed

Brito-Zerón, Pilar; Ramos-Casals, Manuel; Nardi, Norma; Cervera, Ricard; Yagüe, Jordi; Ingelmo, Miguel; Font, Josep

2005-03-01

We conducted the current study to analyze the prevalence and clinical significance of circulating monoclonal immunoglobulins in patients with Sjögren syndrome (SS), focusing on the association with extraglandular features, immunologic markers, hematologic neoplasia, and hepatitis C virus (HCV) infection. We performed serum immunoelectrophoresis in 200 patients with primary SS and 37 patients with HCV-related SS. All patients fulfilled 4 or more of the 1993 European classification criteria for SS.Of the 200 patients with primary SS, 35 (18%) presented circulating monoclonal immunoglobulins. The monoclonal bands identified were 20 IgG (13 kappa, 7 lambda), 10 IgM (5 kappa, 5 lambda), 2 IgAkappa, and 3 free circulating light chains. Of the 37 SS-HCV patients, 16 (43%) had circulating monoclonal immunoglobulins. The monoclonal bands identified were 10 IgMkappa, 5 IgGlambda, and 1 free light lambda chain. Compared with primary SS patients, SS-HCV patients presented a higher frequency of monoclonal immunoglobulins (43% vs 18%, p = 0.001), with monoclonal IgMkappa being the most frequent monoclonal band. Six (12%) of the 51 SS patients with circulating monoclonal immunoglobulins presented hematologic neoplasia, compared with 3 (1.6%) of those without monoclonal immunoglobulins (p = 0.004; odds ratio = 8.13; 95% confidence intervals, 1.64-51.54). In 2 of the 6 patients with monoclonal immunoglobulins and lymphoproliferative disorders, a change of the monoclonal component was detected in previous immunoelectrophoresis determinations before the development of hematologic neoplasia. Circulating monoclonal immunoglobulins were detected in nearly 20% of patients with primary SS, with monoclonal IgG being the most frequent type of immunoglobulin detected. In SS-HCV patients, the prevalence of monoclonal immunoglobulins was higher (43%), with monoclonal IgM being the most frequent type found. SS-HCV patients presented a more restrictive monoclonal expression (limited to either monoclonal IgMkappa or monoclonal IgGlambda) than primary SS patients, who showed all types of heavy and light chains.

Human Leptospira Isolates Circulating in Mayotte (Indian Ocean) Have Unique Serological and Molecular Features

PubMed Central

Bourhy, P.; Collet, L.; Lernout, T.; Zinini, F.; Hartskeerl, R. A.; van der Linden, Hans; Thiberge, J. M.; Diancourt, L.; Brisse, S.; Giry, C.; Pettinelli, F.

2012-01-01

Leptospirosis is one of the most widespread zoonoses in the world. However, there is a lack of information on circulating Leptospira strains in remote parts of the world. We describe the serological and molecular features of leptospires isolated from 94 leptospirosis patients in Mayotte, a French department located in the Comoros archipelago, between 2007 and 2010. Multilocus sequence typing identified these isolates as Leptospira interrogans, L. kirschneri, L. borgpetersenii, and members of a previously undefined phylogenetic group. This group, consisting of 15 strains, could represent a novel species. Serological typing revealed that 70% of the isolates belonged to the serogroup complex Mini/Sejroe/Hebdomadis, followed by the serogroups Pyrogenes, Grippotyphosa, and Pomona. However, unambiguous typing at the serovar level was not possible for most of the strains because the isolate could belong to more than one serovar or because serovar and species did not match the original classification. Our results indicate that the serovar and genotype distribution in Mayotte differs from what is observed in other regions, thus suggesting a high degree of diversity of circulating isolates worldwide. These results are essential for the improvement of current diagnostic tools and provide a starting point for a better understanding of the epidemiology of leptospirosis in this area of endemicity. PMID:22162544

Synoptic typing: interdisciplinary application methods with three practical hydroclimatological examples

NASA Astrophysics Data System (ADS)

Siegert, C. M.; Leathers, D. J.; Levia, D. F.

2017-05-01

Synoptic classification is a methodology that represents diverse atmospheric variables and allows researchers to relate large-scale atmospheric circulation patterns to regional- and small-scale terrestrial processes. Synoptic classification has often been applied to questions concerning the surface environment. However, full applicability has been under-utilized to date, especially in disciplines such as hydroclimatology, which are intimately linked to atmospheric inputs. This paper aims to (1) outline the development of a daily synoptic calendar for the Mid-Atlantic (USA), (2) define seasonal synoptic patterns occurring in the region, and (3) provide hydroclimatological examples whereby the cascading response of precipitation characteristics, soil moisture, and streamflow are explained by synoptic classification. Together, achievement of these objectives serves as a guide for development and use of a synoptic calendar for hydroclimatological studies. In total 22 unique synoptic types were identified, derived from a combination of 12 types occurring in the winter (DJF), 13 in spring (MAM), 9 in summer (JJA), and 11 in autumn (SON). This includes six low pressure systems, four high pressure systems, one cold front, three north/northwest flow regimes, three south/southwest flow regimes, and five weakly defined regimes. Pairwise comparisons indicated that 84.3 % had significantly different rainfall magnitudes, 86.4 % had different rainfall durations, and 84.7 % had different rainfall intensities. The largest precipitation-producing classifications were not restricted to low pressure systems, but rather to patterns with access to moisture sources from the Atlantic Ocean and easterly (on-shore) winds, which transport moisture inland. These same classifications resulted in comparable rates of soil moisture recharge and streamflow discharge, illustrating the applicability of synoptic classification for a range of hydroclimatological research objectives.

Clinical application of a microfluidic chip for immunocapture and quantification of circulating exosomes to assist breast cancer diagnosis and molecular classification.

PubMed

Fang, Shimeng; Tian, Hongzhu; Li, Xiancheng; Jin, Dong; Li, Xiaojie; Kong, Jing; Yang, Chun; Yang, Xuesong; Lu, Yao; Luo, Yong; Lin, Bingcheng; Niu, Weidong; Liu, Tingjiao

2017-01-01

Increasing attention has been attracted by exosomes in blood-based diagnosis because cancer cells release more exosomes in serum than normal cells and these exosomes overexpress a certain number of cancer-related biomarkers. However, capture and biomarker analysis of exosomes for clinical application are technically challenging. In this study, we developed a microfluidic chip for immunocapture and quantification of circulating exosomes from small sample volume and applied this device in clinical study. Circulating EpCAM-positive exosomes were measured in 6 cases breast cancer patients and 3 healthy controls to assist diagnosis. A significant increase in the EpCAM-positive exosome level in these patients was detected, compared to healthy controls. Furthermore, we quantified circulating HER2-positive exosomes in 19 cases of breast cancer patients for molecular classification. We demonstrated that the exosomal HER2 expression levels were almost consistent with that in tumor tissues assessed by immunohistochemical staining. The microfluidic chip might provide a new platform to assist breast cancer diagnosis and molecular classification.

Relationship between climate extremes in Romania and their connection to large-scale air circulation

NASA Astrophysics Data System (ADS)

Barbu, Nicu; Ştefan, Sabina

2015-04-01

The aim of this paper is to investigate the connection between climate extremes (temperature and precipitation) in Romania and large-scale air circulation. Daily observational data of maximum air temperature and amount of precipitation for the period 1961-2010 were used to compute two seasonal indices associated with temperature and precipitation, quantifying their frequency, as follows: frequency of very warm days (FTmax90 ≥ 90th percentile), frequency of very wet days (FPp90; daily precipitation amount ≥ 90th percentile). Seasonally frequency of circulation types were calculated from daily circulation types determined by using two objective catalogues (GWT - GrossWetter-Typen and WLK - WetterLargenKlassifikation) from the COST733Action. Daily reanalysis data sets (sea level pressure, geopotential height at 925 and 500 hPa, u and v components of wind vector at 700 hPa and precipitable water content for the entire atmospheric column) build up by NCEP/NCAR, with 2.5°/2.5° lat/lon spatial resolution, were used to determine the circulation types. In order to select the optimal domain size related to the FTmax90 and the FPp90, the explained variance (EV) has been used. The EV determines the relation between the variance among circulation types and the total variance of the variable under consideration. This method quantifies the discriminatory power of a classification. The relationships between climate extremes in Romania and large-scale air circulation were investigated by using multiple linear regression model (MLRM), the predictands are FTmax90 and FPp90 and the circulation types were used as predictors. In order to select the independent predictors to build the MLRM the collinearity and multicollinearity analysis were performed. The study period is dividend in two periods: the period 1961-2000 is used to train the MLRM and the period 2001-2010 is used to validate the MLRM. The analytical relationship obtained by using MLRM can be used for future projection of the considered predictand. Preliminari results sows that in case of the FTmax90 the optimal domain size must by larger compared to TPp90. We have obtained some good correlation between registered and estimated values of the FTmax90 and the TPp90. Author Barbu N. work was supported by the strategic grant POSDRU/159/1.5/9.137750, "Project Doctoral and Postdoctoral programs support for increased competitiveness in Exact Sciences research" co-financed by the European Social Founds within the Sectoral Operational Program Human Resources Development 2007 - 2013.

Statistical Analysis of Categorical Time Series of Atmospheric Elementary Circulation Mechanisms - Dzerdzeevski Classification for the Northern Hemisphere

PubMed Central

Brenčič, Mihael

2016-01-01

Northern hemisphere elementary circulation mechanisms, defined with the Dzerdzeevski classification and published on a daily basis from 1899–2012, are analysed with statistical methods as continuous categorical time series. Classification consists of 41 elementary circulation mechanisms (ECM), which are assigned to calendar days. Empirical marginal probabilities of each ECM were determined. Seasonality and the periodicity effect were investigated with moving dispersion filters and randomisation procedure on the ECM categories as well as with the time analyses of the ECM mode. The time series were determined as being non-stationary with strong time-dependent trends. During the investigated period, periodicity interchanges with periods when no seasonality is present. In the time series structure, the strongest division is visible at the milestone of 1986, showing that the atmospheric circulation pattern reflected in the ECM has significantly changed. This change is result of the change in the frequency of ECM categories; before 1986, the appearance of ECM was more diverse, and afterwards fewer ECMs appear. The statistical approach applied to the categorical climatic time series opens up new potential insight into climate variability and change studies that have to be performed in the future. PMID:27116375

Statistical Analysis of Categorical Time Series of Atmospheric Elementary Circulation Mechanisms - Dzerdzeevski Classification for the Northern Hemisphere.

PubMed

Brenčič, Mihael

2016-01-01

Northern hemisphere elementary circulation mechanisms, defined with the Dzerdzeevski classification and published on a daily basis from 1899-2012, are analysed with statistical methods as continuous categorical time series. Classification consists of 41 elementary circulation mechanisms (ECM), which are assigned to calendar days. Empirical marginal probabilities of each ECM were determined. Seasonality and the periodicity effect were investigated with moving dispersion filters and randomisation procedure on the ECM categories as well as with the time analyses of the ECM mode. The time series were determined as being non-stationary with strong time-dependent trends. During the investigated period, periodicity interchanges with periods when no seasonality is present. In the time series structure, the strongest division is visible at the milestone of 1986, showing that the atmospheric circulation pattern reflected in the ECM has significantly changed. This change is result of the change in the frequency of ECM categories; before 1986, the appearance of ECM was more diverse, and afterwards fewer ECMs appear. The statistical approach applied to the categorical climatic time series opens up new potential insight into climate variability and change studies that have to be performed in the future.

A combination of circulating miRNAs for the early detection of ovarian cancer

PubMed Central

Yokoi, Akira; Yoshioka, Yusuke; Hirakawa, Akihiro; Yamamoto, Yusuke; Ishikawa, Mitsuya; Ikeda, Shun-ichi; Kato, Tomoyasu; Niimi, Kaoru; Kajiyama, Hiroaki; Kikkawa, Fumitaka; Ochiya, Takahiro

2017-01-01

Ovarian cancer is the leading cause of gynecologic cancer mortality, due to the difficulty of early detection. Current screening methods lack sufficient accuracy, and it is still challenging to propose a new early detection method that improves patient outcomes with less-invasiveness. Although many studies have suggested the utility of circulating microRNAs in cancer detection, their potential for early detection remains elusive. Here, we develop novel predictive models using a combination of 8 circulating serum miRNAs. This method was able to successfully distinguish ovarian cancer patients from healthy controls (area under the curve, 0.97; sensitivity, 0.92; and specificity, 0.91) and early-stage ovarian cancer from patients with benign tumors (0.91, 0.86 and 0.83, respectively). This method also enables subtype classification in 4 types of epithelial ovarian cancer. Furthermore, it is found that most of the 8 miRNAs were packaged in extracellular vesicles, including exosomes, derived from ovarian cancer cells, and they were circulating in murine blood stream. The circulating miRNAs described in this study may serve as biomarkers for ovarian cancer patients. Early detection and subtype determination prior to surgery are crucial for clinicians to design an effective treatment strategy for each patient, as is the goal of precision medicine. PMID:29163790

Assessment of an extended version of the Jenkinson-Collison classification on CMIP5 models over Europe

NASA Astrophysics Data System (ADS)

Otero, Noelia; Sillmann, Jana; Butler, Tim

2018-03-01

A gridded, geographically extended weather type classification has been developed based on the Jenkinson-Collison (JC) classification system and used to evaluate the representation of weather types over Europe in a suite of climate model simulations. To this aim, a set of models participating in the Coupled Model Intercomparison Project Phase 5 (CMIP5) is compared with the circulation from two reanalysis products. Furthermore, we examine seasonal changes between simulated frequencies of weather types at present and future climate conditions. The models are in reasonably good agreement with the reanalyses, but some discrepancies occur in cyclonic days being overestimated over North, and underestimated over South Europe, while anticyclonic situations were overestimated over South, and underestimated over North Europe. Low flow conditions were generally underestimated, especially in summer over South Europe, and Westerly conditions were generally overestimated. The projected frequencies of weather types in the late twenty-first century suggest an increase of Anticyclonic days over South Europe in all seasons except summer, while Westerly days increase over North and Central Europe, particularly in winter. We find significant changes in the frequency of Low flow conditions and the Easterly type that become more frequent during the warmer seasons over Southeast and Southwest Europe, respectively. Our results indicate that in winter the Westerly type has significant impacts on positive anomalies of maximum and minimum temperature over most of Europe. Except in winter, the warmer temperatures are linked to Easterlies, Anticyclonic and Low Flow conditions, especially over the Mediterranean area. Furthermore, we show that changes in the frequency of weather types represent a minor contribution of the total change of European temperatures, which would be mainly driven by changes in the temperature anomalies associated with the weather types themselves.

Atmospheric circulation types and daily mortality in Athens, Greece.

PubMed Central

Kassomenos, P; Gryparis, A; Samoli, E; Katsouyanni, K; Lykoudis, S; Flocas, H A

2001-01-01

We investigated the short-term effects of synoptic and mesoscale atmospheric circulation types on mortality in Athens, Greece. The synoptic patterns in the lower troposphere were classified in 8 a priori defined categories. The mesoscale weather types were classified into 11 categories, using meteorologic parameters from the Athens area surface monitoring network; the daily number of deaths was available for 1987-1991. We applied generalized additive models (GAM), extending Poisson regression, using a LOESS smoother to control for the confounding effects of seasonal patterns. We adjusted for long-term trends, day of the week, ambient particle concentrations, and additional temperature effects. Both classifications, synoptic and mesoscale, explain the daily variation of mortality to a statistically significant degree. The highest daily mortality was observed on days characterized by southeasterly flow [increase 10%; 95% confidence interval (CI), 6.1-13.9% compared to the high-low pressure system), followed by zonal flow (5.8%; 95% CI, 1.8-10%). The high-low pressure system and the northwesterly flow are associated with the lowest mortality. The seasonal patterns are consistent with the annual pattern. For mesoscale categories, in the cold period the highest mortality is observed during days characterized by the easterly flow category (increase 9.4%; 95% CI, 1.0-18.5% compared to flow without the main component). In the warm period, the highest mortality occurs during the strong southerly flow category (8.5% increase; 95% CI, 2.0-15.4% compared again to flow without the main component). Adjusting for ambient particle levels leaves the estimated associations unchanged for the synoptic categories and slightly increases the effects of mesoscale categories. In conclusion, synoptic and mesoscale weather classification is a useful tool for studying the weather-health associations in a warm Mediterranean climate situation. PMID:11445513

The use of normalized climatological anomalies to rank synoptic-scale events and their relation to Weather Types

NASA Astrophysics Data System (ADS)

Ramos, A. M.; Lorenzo, M. N.; Gimeno, L.; Nieto, R.; Añel, J. A.

2009-09-01

Several methods have been developed to rank meteorological events in terms of severity, social impact or economic impacts. These classifications are not always objective since they depend of several factors, for instance, the observation network is biased towards the densely populated urban areas against rural or oceanic areas. It is also very important to note that not all rare synoptic-scale meteorological events attract significant media attention. In this work we use a comprehensive method of classifying synoptic-scale events adapted from Hart and Grumm, 2001, to the European region (30N-60N, 30W-15E). The main motivation behind this method is that the more unusual the event (a cold outbreak, a heat wave, or a flood), for a given region, the higher ranked it must be. To do so, we use four basic meteorological variables (Height, Temperature, Wind and Specific Humidity) from NCEP reanalysis dataset over the range of 1000hPa to 200hPa at a daily basis from 1948 to 2004. The climatology used embraces the 1961-1990 period. For each variable, the analysis of raking climatological anomalies was computed taking into account the daily normalized departure from climatology at different levels. For each day (from 1948 to 2004) we have four anomaly measures, one for each variable, and another, a combined where the anomaly (total anomaly) is the average of the anomaly of the four variables. Results will be analyzed on a monthly, seasonal and annual basis. Seasonal trends and variability will also be shown. In addition, and given the extent of the database, the expected return periods associated with the anomalies are revealed. Moreover, we also use an automated version of the Lamb weather type (WT) classification scheme (Jones et al, 1993) adapted for the Galicia area (Northwestern corner of the Iberian Peninsula) by Lorenzo et al (2008) in order to compute the daily local circulation regimes in this area. By combining the corresponding daily WT with the five anomaly measures we can evaluate if there is any preferable WT responsible for high or low values of anomalies. Hart, R.E and R.H. Grumm (2001) Using normalized climatological anomalies to rank synoptic-scale events objectivily. Monthly Weather Review, 129, 2426-2442. Jones, P. D., M. Hulme, K. R. Briffa (1993) A comparison of Lamb circulation types with anobjective classification scheme. International Journal of Climatology, 13: 655- 663. Lorenzo M.N., J.J. Taboada and L.Gimeno (2008). Links between circulation weather types and teleconnection patterns and their influence on precipitation patterns in Galicia (NW Spain). International Journal of Climatology 28(11): 1493:1505 DOI: 10.1002/joc.1646.

Associations between ozone and morbidity using the Spatial Synoptic Classification system

PubMed Central

2011-01-01

Background Synoptic circulation patterns (large-scale tropospheric motion systems) affect air pollution and, potentially, air-pollution-morbidity associations. We evaluated the effect of synoptic circulation patterns (air masses) on the association between ozone and hospital admissions for asthma and myocardial infarction (MI) among adults in North Carolina. Methods Daily surface meteorology data (including precipitation, wind speed, and dew point) for five selected cities in North Carolina were obtained from the U.S. EPA Air Quality System (AQS), which were in turn based on data from the National Climatic Data Center of the National Oceanic and Atmospheric Administration. We used the Spatial Synoptic Classification system to classify each day of the 9-year period from 1996 through 2004 into one of seven different air mass types: dry polar, dry moderate, dry tropical, moist polar, moist moderate, moist tropical, or transitional. Daily 24-hour maximum 1-hour ambient concentrations of ozone were obtained from the AQS. Asthma and MI hospital admissions data for the 9-year period were obtained from the North Carolina Department of Health and Human Services. Generalized linear models were used to assess the association of the hospitalizations with ozone concentrations and specific air mass types, using pollutant lags of 0 to 5 days. We examined the effect across cities on days with the same air mass type. In all models we adjusted for dew point and day-of-the-week effects related to hospital admissions. Results Ozone was associated with asthma under dry tropical (1- to 5-day lags), transitional (3- and 4-day lags), and extreme moist tropical (0-day lag) air masses. Ozone was associated with MI only under the extreme moist tropical (5-day lag) air masses. Conclusions Elevated ozone levels are associated with dry tropical, dry moderate, and moist tropical air masses, with the highest ozone levels being associated with the dry tropical air mass. Certain synoptic circulation patterns/air masses in conjunction with ambient ozone levels were associated with increased asthma and MI hospitalizations. PMID:21609456

Connective Tissue Reflex Massage for Type 2 Diabetic Patients with Peripheral Arterial Disease: Randomized Controlled Trial

PubMed Central

Castro-Sánchez, Adelaida María; Moreno-Lorenzo, Carmen; Matarán-Peñarrocha, Guillermo A.; Feriche-Fernández-Castanys, Belen; Granados-Gámez, Genoveva; Quesada-Rubio, José Manuel

2011-01-01

The objective of this study was to evaluate the efficacy of connective tissue massage to improve blood circulation and intermittent claudication symptoms in type 2 diabetic patients. A randomized, placebo-controlled trial was undertaken. Ninety-eight type 2 diabetes patients with stage I or II-a peripheral arterial disease (PAD) (Leriche-Fontaine classification) were randomly assigned to a massage group or to a placebo group treated using disconnected magnetotherapy equipment. Peripheral arterial circulation was determined by measuring differential segmental arterial pressure, heart rate, skin temperature, oxygen saturation and skin blood flow. Measurements were taken before and at 30 min, 6 months and 1 year after the 15-week treatment. After the 15-week program, the groups differed (P < .05) in differential segmental arterial pressure in right lower limb (lower one-third of thigh, upper and lower one-third of leg) and left lower limb (lower one-third of thigh and upper and lower one-third of leg). A significant difference (P < .05) was also observed in skin blood flow in digits 1 and 4 of right foot and digits 2, 4 and 5 of left foot. ANOVA results were significant (P < .05) for right and left foot oxygen saturation but not for heart rate and temperature. At 6 months and 1 year, the groups differed in differential segmental arterial pressure in upper third of left and right legs. Connective tissue massage improves blood circulation in the lower limbs of type 2 diabetic patients at stage I or II-a and may be useful to slow the progression of PAD. PMID:19933770

Classification of blood cells and tumor cells using label-free ultrasound and photoacoustics.

PubMed

Strohm, Eric M; Kolios, Michael C

2015-08-01

A label-free method that can identify cells in a blood sample using high frequency photoacoustic and ultrasound signals is demonstrated. When the wavelength of the ultrasound or photoacoustic wave is similar to the size of a single cell (frequencies of 100-500 MHz), unique periodic features occur within the ultrasound and photoacoustic power spectrum that depend on the cell size, structure, and morphology. These spectral features can be used to identify different cell types present in blood, such as red blood cells (RBCs), white blood cells (WBCs), and circulating tumor cells. Circulating melanoma cells are ideal for photoacoustic detection due to their endogenous optical absorption properties. Using a 532 nm pulsed laser and a 375 MHz transducer, the ultrasound and photoacoustic signals from RBCs, WBCs, and melanoma cells were individually measured in an acoustic microscope to examine how the signals change between cell types. A photoacoustic and ultrasound signal was detected from RBCs and melanoma cells; only an ultrasound signal was detected from WBCs. The different cell types were distinctly separated using the ultrasound and photoacoustic signal amplitude and power spectral periodicity. The size of each cell was also estimated from the spectral periodicity. For the first time, sound waves generated using pulse-echo ultrasound and photoacoustics have been used to identify and size single cells, with applications toward counting and identifying cells, including circulating melanoma cells. © 2015 International Society for Advancement of Cytometry.

Comparison and optimization of machine learning methods for automated classification of circulating tumor cells.

PubMed

Lannin, Timothy B; Thege, Fredrik I; Kirby, Brian J

2016-10-01

Advances in rare cell capture technology have made possible the interrogation of circulating tumor cells (CTCs) captured from whole patient blood. However, locating captured cells in the device by manual counting bottlenecks data processing by being tedious (hours per sample) and compromises the results by being inconsistent and prone to user bias. Some recent work has been done to automate the cell location and classification process to address these problems, employing image processing and machine learning (ML) algorithms to locate and classify cells in fluorescent microscope images. However, the type of machine learning method used is a part of the design space that has not been thoroughly explored. Thus, we have trained four ML algorithms on three different datasets. The trained ML algorithms locate and classify thousands of possible cells in a few minutes rather than a few hours, representing an order of magnitude increase in processing speed. Furthermore, some algorithms have a significantly (P < 0.05) higher area under the receiver operating characteristic curve than do other algorithms. Additionally, significant (P < 0.05) losses to performance occur when training on cell lines and testing on CTCs (and vice versa), indicating the need to train on a system that is representative of future unlabeled data. Optimal algorithm selection depends on the peculiarities of the individual dataset, indicating the need of a careful comparison and optimization of algorithms for individual image classification tasks. © 2016 International Society for Advancement of Cytometry. © 2016 International Society for Advancement of Cytometry.

Classification and phagocytosis of circulating haemocytes in Chinese mitten crab (Eriocheir sinensis) and the effect of extrinsic stimulation on circulating haemocytes in vivo.

PubMed

Lv, Sunjian; Xu, Jiehao; Zhao, Jing; Yin, Na; Lu, Binjie; Li, Song; Chen, Yuyin; Xu, Haisheng

2014-08-01

Eriocheir sinensis (Henri Milne Edwards 1854) is one of the most important aquaculture species in China. In this investigation, we characterised the different types of haemocytes of E. sinensis using light and electron microscopy combined with cytochemical analysis and determined the in vivo phagocytic ability of different haemocyte types by injecting polystyrene beads. The haemocytes of E. sinensis were divided into three types: hyalinocytes, semigranulocytes and granulocytes. The hyalinocytes had no or few cytoplasmic granules; the semigranulocytes contained abundant small granules and a few large refractile cytoplasmic granules; and the granulocytes contained numerous large refractile cytoplasmic granules. The hyalinocytes were demonstrated to be the most abundant circulating haemocytes and the most avid phagocytic haemocytes, accounting for approximately 88.7% of the total phagocytes. The haemocyte-containing granules displayed limited phagocytic ability, with approximately 5.0% of granulocytes and 6.3% of semigranulocytes displaying positive phagocytic ability against the invading polystyrene beads in vivo. After injection with Aeromonas hydrophila, Bacillus subtilis and different concentrations of lipopolysaccharide for 0.25, 0.5, 1, 2, 4, 6 and 8 h, all three types of haemocytes experienced dramatic decline and then rapid recovery to their initial levels. A high concentration of lipopolysaccharide and A. hydrophila were extremely toxic to the crabs, as they induced a more serious loss of haemocytes compared with a low concentration of lipopolysaccharide and B. subtilis. Overall, the results obtained in this study indicate that a small proportion of the haemocytes of E. sinensis contributed to the phagocytic process, and the migration of haemocytes and haemocyte lysis were most likely a prominent pathway for pathogen elimination. Copyright © 2014 Elsevier Ltd. All rights reserved.

A new precipitation and drought climatology based on weather patterns.

PubMed

Richardson, Douglas; Fowler, Hayley J; Kilsby, Christopher G; Neal, Robert

2018-02-01

Weather-pattern, or weather-type, classifications are a valuable tool in many applications as they characterize the broad-scale atmospheric circulation over a given region. This study analyses the aspects of regional UK precipitation and meteorological drought climatology with respect to a new set of objectively defined weather patterns. These new patterns are currently being used by the Met Office in several probabilistic forecasting applications driven by ensemble forecasting systems. Weather pattern definitions and daily occurrences are mapped to Lamb weather types (LWTs), and parallels between the two classifications are drawn. Daily precipitation distributions are associated with each weather pattern and LWT. Standardized precipitation index (SPI) and drought severity index (DSI) series are calculated for a range of aggregation periods and seasons. Monthly weather-pattern frequency anomalies are calculated for SPI wet and dry periods and for the 5% most intense DSI-based drought months. The new weather-pattern definitions and daily occurrences largely agree with their respective LWTs, allowing comparison between the two classifications. There is also broad agreement between weather pattern and LWT changes in frequencies. The new data set is shown to be adequate for precipitation-based analyses in the UK, although a smaller set of clustered weather patterns is not. Furthermore, intra-pattern precipitation variability is lower in the new classification compared to the LWTs, which is an advantage in this context. Six of the new weather patterns are associated with drought over the entire UK, with several other patterns linked to regional drought. It is demonstrated that the new data set of weather patterns offers a new opportunity for classification-based analyses in the UK.

A new precipitation and meteorological drought climatology based on weather patterns

NASA Astrophysics Data System (ADS)

Richardson, D.; Fowler, H. J.; Kilsby, C. G.; Neal, R.

2017-12-01

Weather-pattern, or weather-type, classifications are a valuable tool in many applications as they characterise the broad-scale atmospheric circulation over a given region. An analysis of regional UK precipitation and meteorological drought climatology with respect to a set of objectively defined weather patterns is presented. This classification system, introduced last year, is currently being used by the Met Office in several probabilistic forecasting applications driven by ensemble forecasting systems. The classification consists of 30 daily patterns derived from North Atlantic Ocean and European mean sea level pressure data. Clustering these 30 patterns yields another set of eight patterns that are intended for use in longer-range applications. Weather pattern definitions and daily occurrences are mapped to the commonly-used Lamb Weather Types (LWTs), and parallels between the two classifications are drawn. Daily precipitation distributions are associated with each weather pattern and LWT. Drought index series are calculated for a range of aggregation periods and seasons. Monthly weather-pattern frequency anomalies are calculated for different drought index thresholds, representing dry, wet and drought conditions. The set of 30 weather patterns is shown to be adequate for precipitation-based analyses in the UK, although the smaller set of clustered patterns is not. Furthermore, intra-pattern precipitation variability is lower in the new classification compared to the LWTs, which is an advantage in the context of precipitation studies. Weather patterns associated with drought over the different UK regions are identified. This has potential forecasting application - if a model (e.g. a global seasonal forecast model) can predict weather pattern occurrences then regional drought outlooks may be derived from the forecasted weather patterns.

Palaeocirculation across New Zealand during the last glacial maximum at ˜21 ka

NASA Astrophysics Data System (ADS)

Lorrey, Andrew M.; Vandergoes, Marcus; Almond, Peter; Renwick, James; Stephens, Tom; Bostock, Helen; Mackintosh, Andrew; Newnham, Rewi; Williams, Paul W.; Ackerley, Duncan; Neil, Helen; Fowler, Anthony M.

2012-03-01

What circulation pattern drove Southern Alps glacial advances at ˜21 ka? Late 20th century glacial advances in New Zealand are commonly attributed to a dual precipitation increase and cooler than normal temperatures associated with enhanced westerly flow that occur under synoptic pressure patterns termed 'zonal' regimes (Kidson, 2000). But was the circulation pattern that supported major Southern Alps glacial advances during the global LGM similar to the modern analog? Here, a Regional Climate Regime Classification (RCRC) time slice was used to infer past circulation for New Zealand during the LGM at ˜21 ka. Palaeoclimate information that supported the construction of the ˜21 ka time slice was derived from the NZ-INTIMATE Climate Event Stratigraphy (CES), one new Auckland maar proxy record, and additional low-resolution data sourced from the literature. The terrestrial evidence at ˜21 ka implicates several possibilities for past circulation, depending on how interpretations for some proxies are made. The interpretation considered most tenable for the LGM, based on the agreement between terrestrial evidence, marine reconstructions and palaeoclimate model results is an 'anticyclonic/zonal' circulation regime characterized by increased influences from blocking 'highs' over the South Island during winter and an increase in zonal and trough synoptic types (with southerly to westerly quarter wind flow) during summer. These seasonal circulation traits would have generated lower mean annual temperatures, cooler than normal summer temperatures, and overall lower mean annual precipitation for New Zealand (particularly in the western South Island) at ˜21 ka. The anticyclonic/zonal time slice reconstruction presented in this study has different spatial traits than the late 20th Century and the early Little Ice Age signatures, suggesting more than one type of regional circulation pattern can drive Southern Alps glacial activity. This finding lends support to the hypothesis that temperature over precipitation change is more important as the primary modulator of Southern Alps ice advances. The RCRC approach also demonstrates some subtle advantages of integrating multi-proxy data within a palaeocirculation context for New Zealand, notably because this reconstruction technique enables direct comparisons to coarsely resolved palaeoclimate model outputs that do not have downscaled information.

Comprehensive evolutionary and phylogenetic analysis of Hepacivirus N (HNV).

PubMed

da Silva, M S; Junqueira, D M; Baumbach, L F; Cibulski, S P; Mósena, A C S; Weber, M N; Silveira, S; de Moraes, G M; Maia, R D; Coimbra, V C S; Canal, C W

2018-05-24

Hepaciviruses (HVs) have been detected in several domestic and wild animals and present high genetic diversity. The actual classification divides the genus Hepacivirus into 14 species (A-N), according to their phylogenetic relationships, including the bovine hepacivirus [Hepacivirus N (HNV)]. In this study, we confirmed HNV circulation in Brazil and sequenced the whole genome of two strains. Based on the current classification of HCV, which is divided into genotypes and subtypes, we analysed all available bovine hepacivirus sequences in the GenBank database and proposed an HNV classification. All of the sequences were grouped into a single genotype, putatively named 'genotype 1'. This genotype can be clearly divided into four subtypes: A and D containing sequences from Germany and Brazil, respectively, and B and C containing Ghanaian sequences. In addition, the NS3-coding region was used to estimate the time to the most recent common ancestor (TMRCA) of each subtype, using a Bayesian approach and a relaxed molecular clock model. The analyses indicated a common origin of the virus circulating in Germany and Brazil. Ghanaian sequences seemed to have an older TMRCA, indicating a long time of circulation of these viruses in the African continent.

Contrast-Induced Nephropathy Is Less Common in Patients with Good Coronary Collateral Circulation.

PubMed

Avci, Eyup; Yildirim, Tarik; Kadi, Hasan

2017-10-01

Contrast-induced nephropathy (CIN) is a typically reversible type of acute renal failure that develops after exposure to contrast agents; underlying endothelial dysfunction is thought to be an important risk factor for CIN. Although the mechanism of coronary collateral circulation (CCC) is not fully understood, a pivotal role of the endothelium has been reported in many studies. The aim of this study was to investigate whether there is a relationship between CCC and CIN. Patients with at least one occluded major coronary artery and blood creatinine analyses performed before and on the second day after angiography were included in the study. CIN was defined as a 25% or greater elevation of creatinine on the second day after exposure to the contrast agent. Collateral grading was performed according to the Rentrop classification. Patients were grouped according to whether they developed CIN or not, i.e., CIN(-) and CIN(+) group. A total of 214 patients who met the inclusion criteria were included in the study. CIN was diagnosed in 43 patients (20.1%) in the study population. Good CCC was identified in 112 patients (65.5%) in the CIN(-) group, whereas it was identified in 13 patients (30.2%) in the CIN(+) group. In the CIN(-) group, good CCC was significantly more frequent ( p < 0.001). Furthermore, collateral circulation was an independent predictor of CIN. Good collateral circulation was associated with a lower frequency of CIN, and poor collateral circulation was an independent predictor of CIN.

Analysis of chosen urban bioclimatic conditions in Upper Silesian Industrial Region, Poland

NASA Astrophysics Data System (ADS)

Zimnol, Jan

2013-04-01

Due to the increasing urbanization, people spend more and more time in cities. Because of that fact during the last century the human bioclimatological approach had an important influence on the applied urban bioclimatology. The aim of the study was to analyze chosen thermal bioclimatic conditions in urban area of Upper Silesian Industrial Region in connection with the atmospheric circulation and air masses. The study was focused on the thermal conditions that are important for the bioclimatological research on human thermal comfort. They were the basis for making study on how to show the influence of the air masses and circulations types on frequency and variability of the chosen bioclimate indexes. That research was based on data (2004 - 2008) acquired by the Silesian University (Faculty of Earth Sciences) meteorological station located in the city of Sosnowiec (50°17'N, 19°08'E, h=263 m a.s.l.). The temperature measurements were made automatically every 10 minutes on the 2 meters above the ground level. Previous research showed that the station is a good representation of the local urban climate conditions in Upper Silesian Industrial Region. In the study the following air temperatures were taken into consideration: average day temperature, maximum day temperature, minimum day temperature and the average air temperature at 12 UTC. They were associated with atmospheric circulation types and masses typical for the region. Using the data mentioned above I conducted a classification to divide days into following objective categories: cool, cold, comfortable, hot, warm and very hot in the seasonal depiction. The final stage of the work was to find the answer to the following question: "When and how do the strong air masses and air circulations types modify bioclimatic conditions in the study area?" Answer to that question together with further results of the research will be presented on my poster.

What are the most fire-dangerous atmospheric circulations in the Eastern-Mediterranean? Analysis of the synoptic wildfire climatology.

PubMed

Paschalidou, A K; Kassomenos, P A

2016-01-01

Wildfire management is closely linked to robust forecasts of changes in wildfire risk related to meteorological conditions. This link can be bridged either through fire weather indices or through statistical techniques that directly relate atmospheric patterns to wildfire activity. In the present work the COST-733 classification schemes are applied in order to link wildfires in Greece with synoptic circulation patterns. The analysis reveals that the majority of wildfire events can be explained by a small number of specific synoptic circulations, hence reflecting the synoptic climatology of wildfires. All 8 classification schemes used, prove that the most fire-dangerous conditions in Greece are characterized by a combination of high atmospheric pressure systems located N to NW of Greece, coupled with lower pressures located over the very Eastern part of the Mediterranean, an atmospheric pressure pattern closely linked to the local Etesian winds over the Aegean Sea. During these events, the atmospheric pressure has been reported to be anomalously high, while anomalously low 500hPa geopotential heights and negative total water column anomalies were also observed. Among the various classification schemes used, the 2 Principal Component Analysis-based classifications, namely the PCT and the PXE, as well as the Leader Algorithm classification LND proved to be the best options, in terms of being capable to isolate the vast amount of fire events in a small number of classes with increased frequency of occurrence. It is estimated that these 3 schemes, in combination with medium-range to seasonal climate forecasts, could be used by wildfire risk managers to provide increased wildfire prediction accuracy. Copyright © 2015 Elsevier B.V. All rights reserved.

Discovery of User-Oriented Class Associations for Enriching Library Classification Schemes.

ERIC Educational Resources Information Center

Pu, Hsiao-Tieh

2002-01-01

Presents a user-based approach to exploring the possibility of adding user-oriented class associations to hierarchical library classification schemes. Classes not grouped in the same subject hierarchies yet relevant to users' knowledge are obtained by analyzing a log book of a university library's circulation records, using collaborative filtering…

Relationship of white matter lesions and severity of pushing behavior after stroke.

PubMed

Fujino, Yuji; Amimoto, Kazu; Sugimoto, Satoshi; Fukata, Kazuhiro; Inoue, Masahide; Uchino, Akira; Takahashi, Hidetoshi; Makita, Shigeru

2017-12-01

[Purpose] The relationship between white matter lesions (WMLs) and pushing behavior (PB) is still poorly understood. The purpose of this study was to investigate whether damage from WMLs affects the functional outcome of PB after acute stroke. [Subjects and Methods] In total, 37 patients were included. PB was assessed using the standardized Scale for Contraversive Pushing (SCP). Stroke types were classified as total anterior circulation infarct (TACI), partial anterior circulation infarct (PACI), or lacunar syndrome using the Bamford classification. WML severity was categorized into four groups using the Fazekas visual scale. Thereafter, patients were divided into 4 groups according to the stroke type and/or presence of WMLs. The SCP, Trunk Control Test (TCT), Stroke Impairment Assessment Set (SIAS), and Barthel Index were the outcome measures. [Results] The SCP and TCT in patients with PACI without WMLs were better than those in patients with TACI with or without WMLs. Regarding SCP, TCT, and SIAS, patients with TACI had poorer values compared with PACI, regardless of WML severity. Barthel Index efficiency was not significantly different between the groups. [Conclusion] Our results suggest that moderate to severe WMLs and PACI had a relationship with PB severity and truncal balance.

Moderate to heavy cold-weather precipitation occurrences in Tehran and the associated circulation types

NASA Astrophysics Data System (ADS)

Khansalari, Sakineh; Raziei, Tayeb; Mohebalhojeh, Ali Reza; Ahmadi-Givi, Farhang

2018-02-01

Large-scale atmospheric circulations associated with 133 moderate to heavy cold-weather precipitation events recorded at Mehrabad station in Tehran, Iran, during the period 1951-2013 are analysed. To this end, the performance of un-rotated, orthogonally rotated and obliquely rotated solutions of T-mode principal component analysis (PCA) is examined in classifying the atmospheric circulations into a few representative circulation types (CTs). The T-mode PCAs were applied to the 500-hPa geopotential height for the events in a domain from 10∘E to 70∘E and from 20∘N to 50∘N. The first six leading principal components were retained and then orthogonally and obliquely rotated using varimax and promax solutions, respectively. Statistical inter-comparison of the CTs obtained using the three solutions suggests that the obliquely rotated solution is the better choice for circulation classification in the present study. The six CTs obtained using the oblique rotation were then linked to the daily total precipitation and daily mean temperature variability at Tehran station as well as to the standardized anomalies of the daily total precipitation and mean daily temperature of a dense network of stations distributed across Iran. It is found that the CTs identified, though generally comparable in producing significant precipitation in Tehran, vary in their potential to bring cold weather and generate snowfall in Tehran specifically and in the country in general. While the first three CTs give rise to regional patterns of standardized precipitation anomalies centred in Tehran, the next three CTs leave a pronounced precipitation signature almost across the whole country. As regards the standardized temperature anomalies, with the exception of one CT that causes deep and widespread negative standardized anomalies over most parts of the country, the other CTs are characterized with a dipolar structure of a deep intrusion of cold weather to the west and prevailing warm weather to the east of the country.

Summarising climate and air quality (ozone) data on self-organising maps: a Sydney case study.

PubMed

Jiang, Ningbo; Betts, Alan; Riley, Matt

2016-02-01

This paper explores the classification and visualisation utility of the self-organising map (SOM) method in the context of New South Wales (NSW), Australia, using gridded NCEP/NCAR geopotential height reanalysis for east Australia, together with multi-site meteorological and air quality data for Sydney from the NSW Office of Environment and Heritage Air Quality Monitoring Network. A twice-daily synoptic classification has been derived for east Australia for the period of 1958-2012. The classification has not only reproduced the typical synoptic patterns previously identified in the literature but also provided an opportunity to visualise the subtle, non-linear change in the eastward-migrating synoptic systems influencing NSW (including Sydney). The summarisation of long-term, multi-site air quality/meteorological data from the Sydney basin on the SOM plane has identified a set of typical air pollution/meteorological spatial patterns in the region. Importantly, the examination of these patterns in relation to synoptic weather types has provided important visual insights into how local and synoptic meteorological conditions interact with each other and affect the variability of air quality in tandem. The study illustrates that while synoptic circulation types are influential, the within-type variability in mesoscale flows plays a critical role in determining local ozone levels in Sydney. These results indicate that the SOM can be a useful tool for assessing the impact of weather and climatic conditions on air quality in the regional airshed. This study further promotes the use of the SOM method in environmental research.

Future projections of synoptic weather types over the Arabian Peninsula during the twenty-first century using an ensemble of CMIP5 models

NASA Astrophysics Data System (ADS)

El Kenawy, Ahmed M.; McCabe, Matthew F.

2017-10-01

An assessment of future change in synoptic conditions over the Arabian Peninsula throughout the twenty-first century was performed using 20 climate models from the Coupled Model Intercomparison Project Phase 5 (CMIP5) database. We employed the mean sea level pressure (SLP) data from model output together with NCEP/NCAR reanalysis data and compared the relevant circulation types produced by the Lamb classification scheme for the base period 1975-2000. Overall, model results illustrated good agreement with the reanalysis, albeit with a tendency to underestimate cyclonic (C) and southeasterly (SE) patterns and to overestimate anticyclones and directional flows. We also investigated future projections for each circulation-type during the rainy season (December-May) using three Representative Concentration Pathways (RCPs), comprising RCP2.6, RCP4.5, and RCP8.5. Overall, two scenarios (RCP4.5 and RCP 8.5) revealed a statistically significant increase in weather types favoring above normal rainfall in the region (e.g., C and E-types). In contrast, weather types associated with lower amounts of rainfall (e.g., anticyclones) are projected to decrease in winter but increase in spring. For all scenarios, there was consistent agreement on the sign of change (i.e., positive/negative) for the most frequent patterns (e.g., C, SE, E and A-types), whereas the sign was uncertain for less recurrent types (e.g., N, NW, SE, and W). The projected changes in weather type frequencies in the region can be viewed not only as indicators of change in rainfall response but may also be used to inform impact studies pertinent to water resource planning and management, extreme weather analysis, and agricultural production.

Potential alteration of fjordal circulation due to a large floating structure—Numerical investigation with application to Hood Canal basin in Puget Sound

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khangaonkar, Tarang; Wang, Taiping

Circulation in typical fjords is characterized by a shallow brackish layer at the surface over a deep long and narrow saltwater column. This surface layer is responsible for the outflow of water from the fjord, is easily disrupted by external forces, such as wind, and is influenced by freshwater inflow. In this paper, we postulate that the stability of fjordal circulation may also be vulnerable to impacts from anthropogenic alterations, such as floating structures, that could constrict the mixing and transport in the upper layers of the water column. The potential for alteration of circulation in Hood Canal, a silled-fjordmore » located inside Puget Sound, Washington, has been examined. Using classical analytical treatments along the lines formulated by Hansen and Rattray [1965], Rattray [1967], Dyer [1973] and more recently, MacCready [2004], we develop a solution applicable to a range of estuary classifications varying from a partially mixed estuary regime to classical fjord conditions. Both estuary types exist in the Puget Sound system, and we compare our analytical solution with observed data. The analysis is based on an exponential variation of eddy viscosity with depth, and it has been extended further with modifications of the free surface boundary conditions to develop a solution representing the presence of a floating bridge at the estuary/fjord entrance. The model results show that tidally averaged mean circulation under the influence of such a constraint could reduce by as much as 30 to 50 percent. The overall water quality of fjords and narrow estuaries is dependent on net circulation and flushing. A potential decrease in residual flow or a corresponding increase in residence time of this magnitude merits further study.« less

Interannual rainfall variability and SOM-based circulation classification

NASA Astrophysics Data System (ADS)

Wolski, Piotr; Jack, Christopher; Tadross, Mark; van Aardenne, Lisa; Lennard, Christopher

2018-01-01

Self-Organizing Maps (SOM) based classifications of synoptic circulation patterns are increasingly being used to interpret large-scale drivers of local climate variability, and as part of statistical downscaling methodologies. These applications rely on a basic premise of synoptic climatology, i.e. that local weather is conditioned by the large-scale circulation. While it is clear that this relationship holds in principle, the implications of its implementation through SOM-based classification, particularly at interannual and longer time scales, are not well recognized. Here we use a SOM to understand the interannual synoptic drivers of climate variability at two locations in the winter and summer rainfall regimes of South Africa. We quantify the portion of variance in seasonal rainfall totals that is explained by year to year differences in the synoptic circulation, as schematized by a SOM. We furthermore test how different spatial domain sizes and synoptic variables affect the ability of the SOM to capture the dominant synoptic drivers of interannual rainfall variability. Additionally, we identify systematic synoptic forcing that is not captured by the SOM classification. The results indicate that the frequency of synoptic states, as schematized by a relatively disaggregated SOM (7 × 9) of prognostic atmospheric variables, including specific humidity, air temperature and geostrophic winds, captures only 20-45% of interannual local rainfall variability, and that the residual variance contains a strong systematic component. Utilising a multivariate linear regression framework demonstrates that this residual variance can largely be explained using synoptic variables over a particular location; even though they are used in the development of the SOM their influence, however, diminishes with the size of the SOM spatial domain. The influence of the SOM domain size, the choice of SOM atmospheric variables and grid-point explanatory variables on the levels of explained variance, is consistent with the general understanding of the dominant processes and atmospheric variables that affect rainfall variability at a particular location.

[Surgical treatment of congenital obstruction of the left ventricular outflow tract].

PubMed

Biocina, B; Sutlić, Z; Husedinović, I; Letica, D; Sokolić, J

1993-01-01

This report presents the classification and all types of left ventricular outflow tract obstructions. The possibilities of operative therapies are surveyed as well. Results of surgical treatment in 34 patients with obstruction to left ventricular outflow are shown. The majority of patients underwent operation under extracorporeal circulation (84.4%), while the rest were operated by means of the inflow occlusion technique (14.7%). The obtained results were compared with those from the literature. The importance of echocardiographic evaluation of location of the left ventricular outflow tract obstruction and the appropriate choice of a surgical technique according to the patient's age are emphasized.

A new precipitation and drought climatology based on weather patterns

PubMed Central

Fowler, Hayley J.; Kilsby, Christopher G.; Neal, Robert

2017-01-01

ABSTRACT Weather‐pattern, or weather‐type, classifications are a valuable tool in many applications as they characterize the broad‐scale atmospheric circulation over a given region. This study analyses the aspects of regional UK precipitation and meteorological drought climatology with respect to a new set of objectively defined weather patterns. These new patterns are currently being used by the Met Office in several probabilistic forecasting applications driven by ensemble forecasting systems. Weather pattern definitions and daily occurrences are mapped to Lamb weather types (LWTs), and parallels between the two classifications are drawn. Daily precipitation distributions are associated with each weather pattern and LWT. Standardized precipitation index (SPI) and drought severity index (DSI) series are calculated for a range of aggregation periods and seasons. Monthly weather‐pattern frequency anomalies are calculated for SPI wet and dry periods and for the 5% most intense DSI‐based drought months. The new weather‐pattern definitions and daily occurrences largely agree with their respective LWTs, allowing comparison between the two classifications. There is also broad agreement between weather pattern and LWT changes in frequencies. The new data set is shown to be adequate for precipitation‐based analyses in the UK, although a smaller set of clustered weather patterns is not. Furthermore, intra‐pattern precipitation variability is lower in the new classification compared to the LWTs, which is an advantage in this context. Six of the new weather patterns are associated with drought over the entire UK, with several other patterns linked to regional drought. It is demonstrated that the new data set of weather patterns offers a new opportunity for classification‐based analyses in the UK. PMID:29456290

21 CFR 878.5910 - Pneumatic tourniquet.

Code of Federal Regulations, 2014 CFR

2014-04-01

...) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Therapeutic Devices § 878.5910 Pneumatic tourniquet... patient's limb and inflated to reduce or totally occlude circulation during surgery. (b) Classification...

21 CFR 878.5910 - Pneumatic tourniquet.

Code of Federal Regulations, 2012 CFR

2012-04-01

...) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Therapeutic Devices § 878.5910 Pneumatic tourniquet... patient's limb and inflated to reduce or totally occlude circulation during surgery. (b) Classification...

21 CFR 878.5910 - Pneumatic tourniquet.

Code of Federal Regulations, 2010 CFR

2010-04-01

...) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Therapeutic Devices § 878.5910 Pneumatic tourniquet... patient's limb and inflated to reduce or totally occlude circulation during surgery. (b) Classification...

21 CFR 878.5910 - Pneumatic tourniquet.

Code of Federal Regulations, 2013 CFR

2013-04-01

...) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Therapeutic Devices § 878.5910 Pneumatic tourniquet... patient's limb and inflated to reduce or totally occlude circulation during surgery. (b) Classification...

21 CFR 878.5910 - Pneumatic tourniquet.

Code of Federal Regulations, 2011 CFR

2011-04-01

...) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Therapeutic Devices § 878.5910 Pneumatic tourniquet... patient's limb and inflated to reduce or totally occlude circulation during surgery. (b) Classification...

Influence of solar variability on the occurrence of central European weather types from 1763 to 2009

NASA Astrophysics Data System (ADS)

Schwander, Mikhaël; Rohrer, Marco; Brönnimann, Stefan; Malik, Abdul

2017-09-01

The impact of solar variability on weather and climate in central Europe is still not well understood. In this paper we use a new time series of daily weather types to analyse the influence of the 11-year solar cycle on the tropospheric weather of central Europe. We employ a novel, daily weather type classification over the period 1763-2009 and investigate the occurrence frequency of weather types under low, moderate, and high solar activity level. Results show a tendency towards fewer days with westerly and west-southwesterly flow over central Europe under low solar activity. In parallel, the occurrence of northerly and easterly types increases. For the 1958-2009 period, a more detailed view can be gained from reanalysis data. Mean sea level pressure composites under low solar activity also show a reduced zonal flow, with an increase of the mean blocking frequency between Iceland and Scandinavia. Weather types and reanalysis data show that the 11-year solar cycle influences the late winter atmospheric circulation over central Europe with colder (warmer) conditions under low (high) solar activity.

On Lagrangian residual currents with applications in south San Francisco Bay, California

USGS Publications Warehouse

Cheng, Ralph T.; Casulli, Vincenzo

1982-01-01

The Lagrangian residual circulation has often been introduced as the sum of the Eulerian residual circulation and the Stokes' drift. Unfortunately, this definition of the Lagrangian residual circulation is conceptually incorrect because both the Eulerian residual circulation and the Stokes' drift are Eulerian variables. In this paper a classification of various residual variables are reviewed and properly defined. The Lagrangian residual circulation is then studied by means of a two-stage formulation of a computer model. The tidal circulation is first computed in a conventional Eulerian way, and then the Lagrangian residual circulation is determined by a method patterned after the method of markers and cells. To demonstrate properties of the Lagrangian residual circulation, application of this approach in South San Francisco Bay, California, is considered. With the aid of the model results, properties of the Eulerian and Lagrangian residual circulation are examined. It can be concluded that estimation of the Lagrangian residual circulation from Eulerian data may lead to unacceptable error, particularly in a tidal estuary where the tidal excursion is of the same order of magnitude as the length scale of the basin. A direction calculation of the Lagrangian residual circulation must be made and has been shown to be feasible.

Allergic manifestations in patients with rheumatoid arthritis.

PubMed

Olsson, Asa Reckner; Wingren, Gun; Skogh, Thomas; Svernell, Olle; Ernerudh, Jan

2003-10-01

A functional dichotomy between Th1- and Th2-type immune responses has been suggested. This study was performed to investigate whether rheumatoid arthritis (RA), a disease with indications of Th1-deviated immune activation, is inversly related to atopic conditions which are Th2-mediated. Two hundred and sixty-three adult cases of RA, fulfilling the American Rheumatism Association (ARA) 1987 Revised Classification Criteria for RA, were identified in 1995 and compared with 541 randomly selected population referents. The presence of atopic manifestations was established through a postal questionnaire and by demonstrating circulating IgE antibodies to common allergens. RA was inversely associated with certain manifestations of rhinitis, which were regarded as the most reliable indicators of atopic disease in the present study. However, no negative association was seen between RA and asthma and eczema, respectively. The main results give some support for an inverse relationship between RA and rhinitis. The prevalence of circulating IgE antibodies was however similar in cases and controls, suggesting that the T-cell commitment mainly occurs in the affected organs.

From Breast to Bone: Tracking Gene Expression Changes Responsible for Breast Cancer Metastasis in a Humanized Mouse Model with Molecular Imaging

DTIC Science & Technology

2015-11-01

strategies to predict and prevent metastasis. 15. SUBJECT TERMS triple-negative breast cancer, metastasis, p53, BTG2, PDX Models 16. SECURITY CLASSIFICATION...membrane and into the circulation, survival in the circulation, extravasation into distant organs, tumor dormancy, and finally tumor growth in the...sequencing analysis are novel targets for metastasis prevention or are more effective at destroying metastatic cells while minimizing the risk of

Simulated and Observed Circulation in the Indonesian Seas: 1/12 degree Global HYCOM and the INSTANT Observations

DTIC Science & Technology

2010-01-01

Circulation in the Indonesian Seas: 1/12 degree Global HYCOM and the INSTANT Observations 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM...SUPPLEMENTARY NOTES 14. ABSTRACT A l/l 2 global version of the HYbrid Coordinate Ocean Model (HYCOM) using 3-hourly atmospheric forcing is analyzed and...TERMS Indonesian Throughflow, global HYCOM, INSTANT, Inter-ocean exchange, ocean modeling 16. SECURITY CLASSIFICATION OF: a. REPORT Unclassified b

Estimating research productivity and quality in assistive technology: a bibliometric analysis spanning four decades.

PubMed

Ryan, Cindy; Tewey, Betsy; Newman, Shelia; Turner, Tracy; Jaeger, Robert J

2004-12-01

Conduct a quantitative assessment of the number of papers contained in MEDLINE related to selected types of assistive technology (AT), and to identify journals publishing significant numbers of papers related to AT, and evaluate them with quantitative productivity and quality measures. Consecutive sample of all papers in MEDLINE identified by standard medical subject headings for selected types of AT from 1963-2003. Number of journals carrying AT papers, papers per journal (both total number and those specific to AT), journal impact factor, circulation, and number of AT citations per year over time for each area of AT. We present search terms, estimates of the numbers of AT citations in MEDLINE, the journals most likely to contain articles related to AT, journal impact factors, and journal circulations (when available). We also present the number of citations in various areas of AT over time from 1963-2003. Suggestions are presented for possible future modifications of the MEDLINE controlled vocabulary, based on terminology used in existing AT classifications schemes, such as ISO 9999. Research papers in the areas of AT examined showed publication across a wide variety of journals. There are a number of journals publishing articles in AT that have impact factors above the median. Some areas of AT have shown an increase in publications per year over time, while others have shown a more constant level of productivity.

Changes in present and future circulation types frequency in northwest Iberian Peninsula.

PubMed

Lorenzo, María N; Ramos, Alexandre M; Taboada, Juan J; Gimeno, Luis

2011-01-21

The aim of the work described herein was to study projection scenarios in order to find changes in the synoptic variability of the northwest Iberian Peninsula in the 21st century. To this end, we investigated the changes in the frequency of the different circulation types computed for the study area using three different models used in the IPCC 4(th) assessment report. The circulation types were computed using the procedure known as Lamb circulation types. The control simulation for the late 20th century was evaluated objectively from the results obtained using data from the NCEP/NCAR reanalysis, as to evaluate the ability of the model to reproduce the present climate. We have compared not only seasonal mean sea level pressure fields but also the mean seasonal frequency of circulation types. The results for the end of the 21st century show a decrease in the frequency of cyclonic, W, and SW circulation types in the spring and summer months. This trend also appears in the autumn, with a concomitant increase in the anticyclonic types.

Changes in Present and Future Circulation Types Frequency in Northwest Iberian Peninsula

PubMed Central

Lorenzo, María N.; Ramos, Alexandre M.; Taboada, Juan J.; Gimeno, Luis

2011-01-01

The aim of the work described herein was to study projection scenarios in order to find changes in the synoptic variability of the northwest Iberian Peninsula in the 21st century. To this end, we investigated the changes in the frequency of the different circulation types computed for the study area using three different models used in the IPCC 4th assessment report. The circulation types were computed using the procedure known as Lamb circulation types. The control simulation for the late 20th century was evaluated objectively from the results obtained using data from the NCEP/NCAR reanalysis, as to evaluate the ability of the model to reproduce the present climate. We have compared not only seasonal mean sea level pressure fields but also the mean seasonal frequency of circulation types. The results for the end of the 21st century show a decrease in the frequency of cyclonic, W, and SW circulation types in the spring and summer months. This trend also appears in the autumn, with a concomitant increase in the anticyclonic types. PMID:21283703

Hemocytes and hemocytopoiesis in Silkworms.

PubMed

Beaulaton, J

1979-01-01

A brief review is presented of the current state of ultrastructure, cytochemistry, and physiology of the hemocytes and meso- and metathoracic peri-imaginal-wing organs in silkworms. According to the accepted morphological classification, five circulating types of hemocytes are recognized in Bombyx mori as well as in Antheraea pernyi. They are prophemocytes or stem cells, plasmatocytes or pre-differentiated cells and three specialized cells, granulocytes, spherule cells and oenocytoids. During post-embryonic development the last four types are the most common in the circulating hemolymph. Plasmatocytes are considered to be pluripotent cells from which granulocytes, spherule cells and oenocytoids are derived. Contrary to the situation in most insects the plasmatocytes are not phagocytic in Antheraea. The granulocytes are efficient phagocytes. Both plasmatocytes and granulocytes are involved in pinocytosis. Another possible function of the granulocytes is hemolymph coagulation. The function of the spherule cells which contain a paracrystalline material (muco- or glycoproteins) is by no means clear. The phenoloxidase activity found within the cytosol of oenocytoids appears effective against the natural monophenol and diphenol substrates. The involvement of oenocytoids in the complex metabolism of phenols and particularly in the production of plasma phenolases has been reported. The mitotic division of five circulating hemocyte types is well known and was long regarded as the only mechanism of postembryonic hemocyte production. We present for silkworms, experimental evidence of the hemocytopoietic function of the meso- and metathoracic organs surrounding the imaginal wing discs. Ablation experiments demonstrate that the mitotic activity of free hemocytes is unable to maintain the normal hemocytogram in the absence of the two paris of organs. These organs are typically divided into cell islets ensheathed by a connective tissue membrane. Two types of islets may be classified by the disposition of the cells : the compact islets or aggregations of stem cells and the reticulate islets which are mainly composed of hemocytes at different steps of differentiation. The relative number of prohemocytes in the total hemocyte population ranges from 84 to 97 p. cent in organs of Antheraea pernyi. This well-defined cell type appears to be the major hemocyte type in hemocytopoietic organs. In Antheraea, the mitotic index (the relative number of mitotic hemocytes in the total cell population) varies from 0.5 to about 3 p. cent. Finally, our data direct attention to cyclic functional changes such as mitotic divisions and hemocyte differentiation which run parallel to the molting cycle.

Dynamic Information and Library Processing.

ERIC Educational Resources Information Center

Salton, Gerard

This book provides an introduction to automated information services: collection, analysis, classification, storage, retrieval, transmission, and dissemination. An introductory chapter is followed by an overview of mechanized processes for acquisitions, cataloging, and circulation. Automatic indexing and abstracting methods are covered, followed…

Cancer cell classification with coherent diffraction imaging using an extreme ultraviolet radiation source

PubMed Central

Zürch, Michael; Foertsch, Stefan; Matzas, Mark; Pachmann, Katharina; Kuth, Rainer; Spielmann, Christian

2014-01-01

Abstract. In cancer treatment, it is highly desirable to classify single cancer cells in real time. The standard method is polymerase chain reaction requiring a substantial amount of resources and time. Here, we present an innovative approach for rapidly classifying different cell types: we measure the diffraction pattern of a single cell illuminated with coherent extreme ultraviolet (XUV) laser-generated radiation. These patterns allow distinguishing different breast cancer cell types in a subsequent step. Moreover, the morphology of the object can be retrieved from the diffraction pattern with submicron resolution. In a proof-of-principle experiment, we prepared single MCF7 and SKBR3 breast cancer cells on gold-coated silica slides. The output of a laser-driven XUV light source is focused onto a single unstained and unlabeled cancer cell. With the resulting diffraction pattern, we could clearly identify the different cell types. With an improved setup, it will not only be feasible to classify circulating tumor cells with a high throughput, but also to identify smaller objects such as bacteria or even viruses. PMID:26158049

Cancer cell classification with coherent diffraction imaging using an extreme ultraviolet radiation source.

PubMed

Zürch, Michael; Foertsch, Stefan; Matzas, Mark; Pachmann, Katharina; Kuth, Rainer; Spielmann, Christian

2014-10-01

In cancer treatment, it is highly desirable to classify single cancer cells in real time. The standard method is polymerase chain reaction requiring a substantial amount of resources and time. Here, we present an innovative approach for rapidly classifying different cell types: we measure the diffraction pattern of a single cell illuminated with coherent extreme ultraviolet (XUV) laser-generated radiation. These patterns allow distinguishing different breast cancer cell types in a subsequent step. Moreover, the morphology of the object can be retrieved from the diffraction pattern with submicron resolution. In a proof-of-principle experiment, we prepared single MCF7 and SKBR3 breast cancer cells on gold-coated silica slides. The output of a laser-driven XUV light source is focused onto a single unstained and unlabeled cancer cell. With the resulting diffraction pattern, we could clearly identify the different cell types. With an improved setup, it will not only be feasible to classify circulating tumor cells with a high throughput, but also to identify smaller objects such as bacteria or even viruses.

Effect of two types of helium circulators on the performance of a subsonic nuclear powered airplane

NASA Technical Reports Server (NTRS)

Strack, W. C.

1971-01-01

Two types of helium circulators are analytically compared on the bases of their influence on airplane payload and on propulsion system variables. One type of circulator is driven by the turbofan engines with power takeoff shafting while the other, a turbocirculator, is powered by a turbine placed in the helium loop between the nuclear reactor and the helium-to-air heat exchangers inside the engines. Typical results show that the turbocirculator yields more payload for circulator efficiencies greater than 0.82. Optimum engine and heat exchanger temperatures and pressures are significantly lower in the turbocirculator case compared to the engine-driven circulator scheme.

Weather types and strokes in the Augsburg region (Southern Germany)

NASA Astrophysics Data System (ADS)

Beck, Christoph; Ertl, Michael; Giemsa, Esther; Jacobeit, Jucundus; Naumann, Markus; Seubert, Stefanie

2017-04-01

Strokes are one of the leading causes of morbidity and mortality worldwide and the main reason for longterm care dependency in Germany. Concerning the economical impact on patients and healthcare systems it is of particular importance to prevent this disease as well as to improve the outcome of the affected persons. Beside the primary well-known risk factors like hypertension, cigarette smoking, physical inactivity and others, also weather seems to have pronounced influence on the occurrence and frequency of strokes. Previous studies most often focused on effects of singular meteorological variables like ambient air temperature, air pressure or humidity. An advanced approach is to link the entire suite of daily weather elements classified to air mass- or weather types to cerebrovascular morbidity or mortality. In a joint pilot study bringing together climatologists, environmental scientists and physicians from the University of Augsburg and the clinical centre Augsburg, we analysed relationships between singular meteorological parameters as well as combined weather effects (e.g. weather types) and strokes in the urban area of Augsburg and the surrounding rural region. A total of 17.501 stroke admissions to Neurological Clinic and Clinical Neurophysiology at Klinikum Augsburg between 2006 and 2015 are classified to either "ischaemic" (16.354) or "haemorrhagic" (1.147) subtype according to etiology (based on the International Classification of Diseases - 10th Revision). Spearman correlations between daily frequencies of ischaemic and haemorrhagic strokes and singular atmospheric parameters (T, Tmin, Tmax, air pressure, humidity etc.) measured at the DWD (German weather service) meteorological station at Augsburg Muehlhausen are rather low. However, higher correlations are achieved when considering sub-samples of "homogenous weather conditions" derived from synoptic circulation classifications: e.g. within almost all of 10 types arising from a classification of central European mean sea level pressure fields into "Großwettertypes" (Beck 2000) the relationships between meteorological variables and stroke frequencies are increasing. Mainly temperature variables (Tmin, Tmax, Tmean) appear to be important particularly in winter and summer. Moreover distinct correlations of similar magnitude are obtained with other variables like wind speed or precipitation for specific weather types (e.g. westerly type). In how far these initial findings do really point to additional health impacts beyond temperature effects is subject of ongoing work.

Classification of forest land attributes using multi-source remotely sensed data

NASA Astrophysics Data System (ADS)

Pippuri, Inka; Suvanto, Aki; Maltamo, Matti; Korhonen, Kari T.; Pitkänen, Juho; Packalen, Petteri

2016-02-01

The aim of the study was to (1) examine the classification of forest land using airborne laser scanning (ALS) data, satellite images and sample plots of the Finnish National Forest Inventory (NFI) as training data and to (2) identify best performing metrics for classifying forest land attributes. Six different schemes of forest land classification were studied: land use/land cover (LU/LC) classification using both national classes and FAO (Food and Agricultural Organization of the United Nations) classes, main type, site type, peat land type and drainage status. Special interest was to test different ALS-based surface metrics in classification of forest land attributes. Field data consisted of 828 NFI plots collected in 2008-2012 in southern Finland and remotely sensed data was from summer 2010. Multinomial logistic regression was used as the classification method. Classification of LU/LC classes were highly accurate (kappa-values 0.90 and 0.91) but also the classification of site type, peat land type and drainage status succeeded moderately well (kappa-values 0.51, 0.69 and 0.52). ALS-based surface metrics were found to be the most important predictor variables in classification of LU/LC class, main type and drainage status. In best classification models of forest site types both spectral metrics from satellite data and point cloud metrics from ALS were used. In turn, in the classification of peat land types ALS point cloud metrics played the most important role. Results indicated that the prediction of site type and forest land category could be incorporated into stand level forest management inventory system in Finland.

Newer classification and regression tree techniques: Bagging and Random Forests for ecological prediction

Treesearch

Anantha M. Prasad; Louis R. Iverson; Andy Liaw; Andy Liaw

2006-01-01

We evaluated four statistical models - Regression Tree Analysis (RTA), Bagging Trees (BT), Random Forests (RF), and Multivariate Adaptive Regression Splines (MARS) - for predictive vegetation mapping under current and future climate scenarios according to the Canadian Climate Centre global circulation model.

A HIERARCHIAL STOCHASTIC MODEL OF LARGE SCALE ATMOSPHERIC CIRCULATION PATTERNS AND MULTIPLE STATION DAILY PRECIPITATION

EPA Science Inventory

A stochastic model of weather states and concurrent daily precipitation at multiple precipitation stations is described. our algorithms are invested for classification of daily weather states; k means, fuzzy clustering, principal components, and principal components coupled with ...

Sabbatical Report: Results of a Survey of Library Microforms Facilities.

ERIC Educational Resources Information Center

McIntosh, Melinda C.

1987-01-01

Highlights findings on the status of academic library microforms facilities in the United States and Canada based on visits to 11 libraries. Topics covered include administration, personnel, collection access and storage, classification, acquisition, circulation, indexes, hours, facilities, signage, equipment, photocopying, cleanliness, vandalism,…

Classification of community types, successional sequences, and landscapes of the Copper River Delta, Alaska.

Treesearch

Keith. Boggs

2000-01-01

A classification of community types, successional sequences, and landscapes is presented for the piedmont of the Copper River Delta. The classification was based on a sampling of 471 sites. A total of 75 community types, 42 successional sequences, and 6 landscapes are described. The classification of community types reflects the existing vegetation communities on the...

Circulating amino acids and the risk of macrovascular, microvascular and mortality outcomes in individuals with type 2 diabetes: results from the ADVANCE trial.

PubMed

Welsh, Paul; Rankin, Naomi; Li, Qiang; Mark, Patrick B; Würtz, Peter; Ala-Korpela, Mika; Marre, Michel; Poulter, Neil; Hamet, Pavel; Chalmers, John; Woodward, Mark; Sattar, Naveed

2018-05-04

We aimed to quantify the association of individual circulating amino acids with macrovascular disease, microvascular disease and all-cause mortality in individuals with type 2 diabetes. We performed a case-cohort study (N = 3587), including 655 macrovascular events, 342 microvascular events (new or worsening nephropathy or retinopathy) and 632 all-cause mortality events during follow-up, in a secondary analysis of the Action in Diabetes and Vascular Disease: Preterax and Diamicron Modified Release Controlled Evaluation (ADVANCE) study. For this study, phenylalanine, isoleucine, glutamine, leucine, alanine, tyrosine, histidine and valine were measured in stored plasma samples by proton NMR metabolomics. Hazard ratios were modelled per SD increase in each amino acid. In models investigating associations and potential mechanisms, after adjusting for age, sex and randomised treatment, phenylalanine was positively, and histidine inversely, associated with macrovascular disease risk. These associations were attenuated to the null on further adjustment for extended classical risk factors (including eGFR and urinary albumin/creatinine ratio). After adjustment for extended classical risk factors, higher tyrosine and alanine levels were associated with decreased risk of microvascular disease (HR 0.78; 95% CI 0.67, 0.91 and HR 0.86; 95% CI 0.76, 0.98, respectively). Higher leucine (HR 0.79; 95% CI 0.69, 0.90), histidine (HR 0.89; 95% CI 0.81, 0.99) and valine (HR 0.79; 95% CI 0.70, 0.88) levels were associated with lower risk of mortality. Investigating the predictive ability of amino acids, addition of all amino acids to a risk score modestly improved classification of participants for macrovascular (continuous net reclassification index [NRI] +35.5%, p < 0.001) and microvascular events (continuous NRI +14.4%, p = 0.012). We report distinct associations between circulating amino acids and risk of different major complications of diabetes. Low tyrosine appears to be a marker of microvascular risk in individuals with type 2 diabetes independently of fundamental markers of kidney function.

Molecular Characteristics of Influenza Virus Type B Lineages Circulating in Poland.

PubMed

Bednarska, K; Hallmann-Szelińska, E; Kondratiuk, K; Rabczenko, D; Brydak, L B

2016-01-01

From the time of the Hong Kong pandemic of 1968-1969, vaccines against influenza are trivalent, containing two subtypes of influenza type A: A/H1N1/ and A/H3N2/, and influenza type B. In 1980, circulation of the new Yamagata and Victoria lineages of influenza B virus was noted. Since both lineages have continued to circulate, the second lineage of influenza B was included into the trivalent vaccine as of the 2013/2014 epidemic season. In Poland, co-circulation of influenza type A and B has been registered over many seasons, although type A has predominated. According to the ACIP recommendations, quadrivalent vaccines against influenza are administered in some continents due to circulation of the B-Yamagata and B-Victoria lineages. Currently, only trivalent vaccines against influenza are available in Poland. The aim of the present research was to determine which of the two influenza type B lineages, or possibly both, would be isolated in Poland. The study was conducted with the use of RT-PCR. Generally, in the 2014/2015 epidemic season in Poland, circulation of type B virus was confirmed in 34 % of influenza cases. A total of 89 specimens of influenza B were tested, including co-infections of influenza B with influenza A subtypes: A/H1N1/pdm09 and A/H3N2/. The findings were that only lineage B-Yamagata circulates in the Polish population. Therefore, vaccines available on the Polish market do not require the introduction of a fourth component.

Study of USGS/NASA land use classification system. [computer analysis from LANDSAT data

NASA Technical Reports Server (NTRS)

Spann, G. W.

1975-01-01

The results of a computer mapping project using LANDSAT data and the USGS/NASA land use classification system are summarized. During the computer mapping portion of the project, accuracies of 67 percent to 79 percent were achieved using Level II of the classification system and a 4,000 acre test site centered on Douglasville, Georgia. Analysis of response to a questionaire circulated to actual and potential LANDSAT data users reveals several important findings: (1) there is a substantial desire for additional information related to LANDSAT capabilities; (2) a majority of the respondents feel computer mapping from LANDSAT data could aid present or future projects; and (3) the costs of computer mapping are substantially less than those of other methods.

Circulating betatrophin is elevated in patients with type 1 and type 2 diabetes.

PubMed

Yamada, Hodaka; Saito, Tomoyuki; Aoki, Atsushi; Asano, Tomoko; Yoshida, Masashi; Ikoma, Aki; Kusaka, Ikuyo; Toyoshima, Hideo; Kakei, Masafumi; Ishikawa, San-E

2015-01-01

There is evidence that betatrophin, a hormone derived from adipose tissue and liver, affects the proliferation of pancreatic beta cells in mice. The aim of this study was to examine circulating betatrophin concentrations in Japanese healthy controls and patients with type 1 and type 2 diabetes. A total of 76 subjects (12 healthy controls, 34 type 1 diabetes, 30 type 2 diabetes) were enrolled in the study. Circulating betatrophin was measured with an ELISA kit and clinical parameters related to betatrophin were analyzed statistically. Circulating betatrophin (Log transformed) was significantly increased in patients with diabetes compared with healthy subjects (healthy controls, 2.29 ± 0.51; type 1 diabetes, 2.94 ± 0.44; type 2 diabetes, 3.17 ± 0.18; p<0.001, 4.1 to 5.4 times in pg/mL order). Age, HbA1c, fasting plasma glucose and Log triglyceride were strongly associated with Log betatrophin in all subjects (n=76) in correlation analysis. In type 1 diabetes, there was a correlation between Log betatrophin and Log CPR. These results provide the first evidence that circulating betatrophin is significantly elevated in Japanese patients with diabetes. The findings of this pilot study also suggest a possibility of association between the level of betatrophin and the levels of glucose and triglycerides.

Analysis of the synoptic winter mortality climatology in five regions of England: Searching for evidence of weather signals.

PubMed

Paschalidou, A K; Kassomenos, P A; McGregor, G R

2017-11-15

Although heat-related mortality has received considerable research attention, the impact of cold weather on public health is less well-developed, probably due to the fact that physiological responses to cold weather can vary substantially among individuals, age groups, diseases etc., depending on a number of behavioral and physiological factors. In the current work we use the classification techniques provided by the COST-733 software to link synoptic circulation patterns with excess cold-related mortality in 5 regions of England. We conclude that, regardless of the classification scheme used, the most hazardous conditions for public health in England are associated with the prevalence of the Easterly type of weather, favoring advection of cold air from continental Europe. It is noteworthy that there has been observed little-to-no regional variation with regards to the classification results among the 5 regions, suggestive of a spatially homogenous response of mortality to the atmospheric patterns identified. In general, the 10 different groupings of days used reveal that excess winter mortality is linked with the lowest daily minimum/maximum temperatures in the area. However it is not uncommon to observe high mortality rates during days with higher, in relative terms, temperatures, when rapidly changing weather results in an increase of mortality. Such a finding confirms the complexity of cold-related mortality and highlights the importance of synoptic climatology in understanding of the phenomenon. Copyright © 2017 Elsevier B.V. All rights reserved.

14 CFR 21.93 - Classification of changes in type design.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Classification of changes in type design... TRANSPORTATION AIRCRAFT CERTIFICATION PROCEDURES FOR PRODUCTS AND PARTS Changes to Type Certificates § 21.93 Classification of changes in type design. (a) In addition to changes in type design specified in paragraph (b) of...

Do thoraco-lumbar spinal injuries classification systems exhibit lower inter- and intra-observer agreement than other fractures classifications?: A comparison using fractures of the trochanteric area of the proximal femur as contrast model.

PubMed

Urrutia, Julio; Zamora, Tomas; Klaber, Ianiv; Carmona, Maximiliano; Palma, Joaquin; Campos, Mauricio; Yurac, Ratko

2016-04-01

It has been postulated that the complex patterns of spinal injuries have prevented adequate agreement using thoraco-lumbar spinal injuries (TLSI) classifications; however, limb fracture classifications have also shown variable agreements. This study compared agreement using two TLSI classifications with agreement using two classifications of fractures of the trochanteric area of the proximal femur (FTAPF). Six evaluators classified the radiographs and computed tomography scans of 70 patients with acute TLSI using the Denis and the new AO Spine thoraco-lumbar injury classifications. Additionally, six evaluators classified the radiographs of 70 patients with FTAPF using the Tronzo and the AO schemes. Six weeks later, all cases were presented in a random sequence for repeat assessment. The Kappa coefficient (κ) was used to determine agreement. Inter-observer agreement: For TLSI, using the AOSpine classification, the mean κ was 0.62 (0.57-0.66) considering fracture types, and 0.55 (0.52-0.57) considering sub-types; using the Denis classification, κ was 0.62 (0.59-0.65). For FTAPF, with the AO scheme, the mean κ was 0.58 (0.54-0.63) considering fracture types and 0.31 (0.28-0.33) considering sub-types; for the Tronzo classification, κ was 0.54 (0.50-0.57). Intra-observer agreement: For TLSI, using the AOSpine scheme, the mean κ was 0.77 (0.72-0.83) considering fracture types, and 0.71 (0.67-0.76) considering sub-types; for the Denis classification, κ was 0.76 (0.71-0.81). For FTAPF, with the AO scheme, the mean κ was 0.75 (0.69-0.81) considering fracture types and 0.45 (0.39-0.51) considering sub-types; for the Tronzo classification, κ was 0.64 (0.58-0.70). Using the main types of AO classifications, inter- and intra-observer agreement of TLSI were comparable to agreement evaluating FTAPF; including sub-types, inter- and intra-observer agreement evaluating TLSI were significantly better than assessing FTAPF. Inter- and intra-observer agreements using the Denis classification were also significantly better than agreement using the Tronzo scheme. Copyright © 2015 Elsevier Ltd. All rights reserved.

Endemic circulation of European bat lyssavirus type 1 in serotine bats, Spain.

PubMed

Vázquez-Morón, Sonia; Juste, Javier; Ibáñez, Carlos; Ruiz-Villamor, Eduardo; Avellón, Ana; Vera, Manuel; Echevarría, Juan E

2008-08-01

To determine the presence of European bat lyssavirus type 1 in southern Spain, we studied 19 colonies of serotine bats (Eptesicus isabellinus), its main reservoir, during 1998-2003. Viral genome and antibodies were detected in healthy bats, which suggests subclinical infection. The different temporal patterns of circulation found in each colony indicate independent endemic circulation.

Extreme fog events in Poland with respect to circulation conditions

NASA Astrophysics Data System (ADS)

Ustrnul, Z.; Czekierda, D.; Wypych, A.

2010-09-01

Fog is a phenomenon which belongs to a group of so-called hydrometeorites and, according to the different dictionaries, it is a suspension of water droplets or ice crystals in the ground layer of the air that impairs visibility in the horizontal direction below 1 km. The phenomenon of fog, although much less dynamic or violent than other extreme phenomena, such as thunderstorms or hail, is equally dangerous and brings about huge social and economic complications. Land and air transportation suffer and fog may sometimes leads to a complete crippling of the whole economy in an area where fog occurs. The main objective of the study is determination of the circulation types bringing extreme fog events in Poland. The duration of fog at each meteorological station was considered as the main input data originated from 54 synoptic stations located across the country. The mentioned data series cover the period of 56 years (1951-2006). The occurrence of fog depends on meteorological conditions caused to a large extent by a given synoptic situation and local terrain conditions. In this study, according to its objectives, only circulation conditions are taken into consideration. These have been described by 5 different circulation classifications (Grosswetterlagen, Litynski, Osuchowska-Klein, Niedzwiedz and Ustrnul). Situations when this phenomenon occurred across a large part of the country were taken into detailed consideration. Special attention was paid to fog coverage during 24-hour periods. In this work, in light of certain doubts about the homogeneity of the observation material available, the intensity of fog was not included, as it requires additional and very tedious analysis. In the first step all cases of fog during the 1966-2006 study period which lasted 24 hours at more than 10 of the considered weather stations, i.e: at least 5 stations have been considered. As expected, in most cases, either a centre of a classical high pressure system or a high pressure wedge prevailed over Poland. In many cases, the dominance of baric patterns with advection from the eastern or southern sectors can be observed. Only in a few cases does a type with advection from the western sector come into play. In summary, it can be stated that intensive extreme fog of long duration occurred first of all in high pressure non-advective situations or along with weak advection, mainly from the southern or eastern direction. This statement, however, is not revolutionary. It simply confirms that the most troublesome of fog types is the radiation type, and can cover all of Poland at the same time and last up to several days. The study contains detailed meteorological-synoptic analyses of the most extreme events during the whole investigated period.

A classification scheme for edge-localized modes based on their probability distributions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shabbir, A., E-mail: aqsa.shabbir@ugent.be; Max Planck Institute for Plasma Physics, D-85748 Garching; Hornung, G.

We present here an automated classification scheme which is particularly well suited to scenarios where the parameters have significant uncertainties or are stochastic quantities. To this end, the parameters are modeled with probability distributions in a metric space and classification is conducted using the notion of nearest neighbors. The presented framework is then applied to the classification of type I and type III edge-localized modes (ELMs) from a set of carbon-wall plasmas at JET. This provides a fast, standardized classification of ELM types which is expected to significantly reduce the effort of ELM experts in identifying ELM types. Further, themore » classification scheme is general and can be applied to various other plasma phenomena as well.« less

New Genotype of Dengue Type 3 Virus Circulating in Brazil and Colombia Showed a Close Relationship to Old Asian Viruses

PubMed Central

Aquino, Victor Hugo; Amarilla, Alberto Anastacio; Alfonso, Helda Liz; Batista, Weber Cheli; Figueiredo, Luiz Tadeu Moraes

2009-01-01

Dengue type 3 genotype V viruses have been recently detected in Brazil and Colombia. In this study, we described another Brazilian isolate belonging to this genotype. Phylogenetic analysis including dengue type 3 viruses isolated worldwide showed that Brazilian and Colombian viruses were closely related to viruses isolated in Asia more than two decades ago. The characteristic evolutionary pattern of dengue type 3 virus cannot explain the close similarity of new circulating viruses with old viruses. Further studies are needed to confirm the origin of the new dengue type III genotype circulating in Brazil and Colombia. PMID:19823677

Standardizing Foot-Type Classification Using Arch Index Values

PubMed Central

Weil, Rich; de Boer, Emily

2012-01-01

ABSTRACT Purpose: The lack of a reliable classification standard for foot type makes drawing conclusions from existing research and clinical decisions difficult, since different foot types may move and respond to treatment differently. The purpose of this study was to determine interrater agreement for foot-type classification based on photo-box-derived arch index values. Method: For this correlational study with two raters, a sample of 11 healthy volunteers with normal to obese body mass indices was recruited from both a community weight-loss programme and a programme in physical therapy. Arch index was calculated using AutoCAD software from footprint photographs obtained via mirrored photo-box. Classification as high-arched, normal, or low-arched foot type was based on arch index values. Reliability of the arch index was determined with intra-class correlations; agreement on foot-type classification was determined using quadratic weighted kappa (κw). Results: Average arch index was 0.215 for one tester and 0.219 for the second tester, with an overall range of 0.017 to 0.370. Both testers classified 6 feet as low-arched, 9 feet as normal, and 7 feet as high-arched. Interrater reliability for the arch index was ICC=0.90; interrater agreement for foot-type classification was κw=0.923. Conclusions: Classification of foot type based on arch index values derived from plantar footprint photographs obtained via mirrored photo-box showed excellent reliability in people with varying BMI. Foot-type classification may help clinicians and researchers subdivide sample populations to better differentiate mobility, gait, or treatment effects among foot types. PMID:23729964

Vaccine-Derived Poliovirus Outbreaks and Events - Three Provinces, Democratic Republic of the Congo, 2017.

PubMed

Alleman, Mary M; Chitale, Rohit; Burns, Cara C; Iber, Jane; Dybdahl-Sissoko, Naomi; Chen, Qi; Van Koko, Djo-Roy; Ewetola, Raimi; Riziki, Yogolelo; Kavunga-Membo, Hugo; Dah, Cheikh; Andriamihantanirina, Rija

2018-03-16

The last confirmed wild poliovirus (WPV) case in Democratic Republic of the Congo (DRC) had paralysis onset in December 2011 (1). DRC has had cases of vaccine-derived polioviruses (VDPVs) documented since 2004 (Table 1) (1-6). After an outbreak of 30 circulating VDPV type 2 (cVDPV2) cases during 2011-2012, only five VDPV2 cases were reported during 2013-2016 (Table 1) (1-6). VDPVs can emerge from oral poliovirus vaccine (OPV types 1, 2, or 3; Sabin) polioviruses that have genetically mutated resulting in reversion to neurovirulence. This process occurs during extensive person-to-person transmission in populations with low immunity or after extended replication in the intestines of immune-deficient persons following vaccination (1-6). During 2017 (as of March 8, 2018), 25 VDPV cases were reported in three provinces in DRC: in Tanganyika province, an emergence with one VDPV2 case (pending final classification) in Kabalo health zone and an emergence with one ambiguous VDPV type 1 (aVDPV1) case in Ankoro health zone; in Maniema province, an emergence with two cVDPV2 cases; and in Haut Lomami province, an emergence with 20 cVDPV2 cases that originated in Haut Lomami province and later spread to Tanganyika province (hereafter referred to as the Haut Lomami outbreak area) and an emergence with one aVDPV type 2 (aVDPV2) case in Lwamba health zone (Table 1) (Figure) (6). Outbreak response supplementary immunization activities (SIAs) were conducted during June-December 2017 (Table 2) (6). Because of limitations in surveillance and suboptimal SIA quality and geographic scope, cVDPV2 circulation is likely continuing in 2018, requiring additional SIAs. DRC health officials and Global Polio Eradication Initiative (GPEI) partners are increasing human and financial resources to improve all aspects of outbreak response.

Phylodynamic analysis of porcine circovirus type 2: Methodological approach and datasets.

PubMed

Franzo, Giovanni; Cortey, Martì; Segalés, Joaquim; Hughes, Joseph; Drigo, Michele

2016-09-01

Since its first description, PCV2 has emerged as one of the most economically relevant diseases for the swine industry. Despite the introduction of vaccines effective in controlling clinical syndromes, PCV2 spread was not prevented and some potential evidences of vaccine immuno escape have recently been reported ("Complete genome sequence of a novel porcine circovirus type 2b variant present in cases of vaccine failures in the United States" (Xiao and Halbur, 2012) [1], "Genetic and antigenic characterization of a newly emerging porcine circovirus type 2b mutant first isolated in cases of vaccine failure in Korea" (Seo et al., 2014) [2]). In this article, we used a collection of PCV2 full genomes, provided in the present manuscript, and several phylogentic, phylodynamic and bioinformatic methods to investigate different aspects of PCV2 epidemiology, history and evolution (more thoroughly described in "PHYLODYNAMIC ANALYSIS of PORCINE CIRCOVIRUS TYPE 2 REVEALS GLOBAL WAVES of EMERGING GENOTYPES and the CIRCULATION of RECOMBINANT FORMS"[3]). The methodological approaches used to consistently detect recombiantion events and estimate population dymanics and spreading patterns of rapidly evolving ssDNA viruses are herein reported. Programs used are described and original scripts have been provided. Ensembled databases used are also made available. These consist of a broad collection of complete genome sequences (i.e. 843 sequences; 63 complete genomes of PCV2a, 310 of PCV2b, 4 of PCV2c, 217 of PCV2d, 64 of CRF01, 140 of CRF02 and 45 of CRF03.), divided in differnt ORF (i.e. ORF1, ORF2 and intergenic regions), of PCV2 genotypes and major Circulating Recombinat Forms (CRF) properly annotated with respective collection data and country. Globally, all of these data can be used as a starting point for further studies and for classification purpose.

Atmospheric circulation patterns and spatial climatic variations in Beringia

NASA Astrophysics Data System (ADS)

Mock, Cary J.; Bartlein, Patrick J.; Anderson, Patricia M.

1998-08-01

Analyses of more than 40 years of climatic data reveal intriguing spatial variations in climatic patterns for Beringia (North-eastern Siberia and Alaska), aiding the understanding of the hierarchy of climatic controls that operate at different spatial scales within the Arctic. A synoptic climatology, using a subjective classification methodology on January and July sea level pressure, and July 500 hPa height anomaly patterns, identified 13 major atmospheric circulation patterns (26 pairs consisting of 13 synoptic/temperature and 13 synoptic/precipitation comparisons) that occur over Beringia. Composite anomaly maps of circulation, temperature, and precipitation described the spatial variability of surface climatic responses to circulation. Results indicate that nine synoptic pairs yield homogeneous surface climatic anomaly patterns throughout most of Beringia. However, many of the surface climatic responses illustrate heterogeneous anomaly patterns as a result of variations in circulation controls, such as troughing over East Asia and the Pacific subtropical high superimposed over topography, with small shifts in atmospheric circulation dramatically altering spatial variations of anomaly patterns. Distinctive contrasts in climatic responses, as suggested from ten synoptic pairs, are clearly evident for Western Beringia versus Eastern Beringia. These results offer important implications for scholars interested in assessing late Quaternary climatic change in the region from interannual to millennial timescales.

Assessment of Aerosol Distributions from GEOS-5 Using the CALIPSO Feature Mask

NASA Technical Reports Server (NTRS)

Welton, Ellsworth

2010-01-01

A-train sensors such as MODIS, MISR, and CALIPSO are used to determine aerosol properties, and in the process a means of estimating aerosol type (e.g. smoke vs. dust). Correct classification of aerosol type is important for climate assessment, air quality applications, and for comparisons and analysis with aerosol transport models. The Aerosols-Clouds-Ecosystems (ACE) satellite mission proposed in the NRC Decadal Survey describes a next generation aerosol and cloud suite similar to the current A-train, including a lidar. The future ACE lidar must be able to determine aerosol type effectively in conjunction with modeling activities to achieve ACE objectives. Here we examine the current capabilities of CALIPSO and the NASA Goddard Earth Observing System general circulation model and data assimilation system (GEOS-5), to place future ACE needs in context. The CALIPSO level 2 feature mask includes vertical profiles of aerosol layers classified by type. GEOS-5 provides global 3D aerosol mass for sulfate, sea salt, dust, and black and organic carbon. A GEOS aerosol scene classification algorithm has been developed to provide estimates of aerosol mixtures and extinction profiles along the CALIPSO orbit track. In previous work, initial comparisons between GEOS-5 derived aerosol mixtures and CALIPSO derived aerosol types were presented for July 2007. In general, the results showed that model and lidar derived aerosol types did not agree well in the boundary layer. Agreement was poor over Europe, where CALIPSO indicated the presence of dust and pollution mixtures yet GEOS-5 was dominated by pollution with little dust. Over the ocean in the tropics, the model appeared to contain less sea salt than detected by CALIPSO, yet at high latitudes the situation was reserved. Agreement between CALIPSO and GEOS-5, aerosol types improved above the boundary layer, primarily in dust and smoke dominated regions. At higher altitudes (> 5 km), the model contained aerosol layers not detected by CALIPSO. Here we present new results for a full year study using the new Version 3 CALIPSO data and most recent GEOS-5 model results.

Effects of School Design on Student Outcomes

ERIC Educational Resources Information Center

Tanner, C. Kenneth

2009-01-01

Purpose: The purpose of this study is to compare student achievement with three school design classifications: movement and circulation, day lighting, and views. Design/methodology/approach: From a sample of 71 schools, measures of these three school designs, taken with a ten-point Likert scale, are compared to students' outcomes defined by six…

Circulation of Endemic Type 2 Vaccine-Derived Poliovirus in Egypt from 1983 to 1993

PubMed Central

Yang, Chen-Fu; Naguib, Tary; Yang, Su-Ju; Nasr, Eman; Jorba, Jaume; Ahmed, Nahed; Campagnoli, Ray; van der Avoort, Harrie; Shimizu, Hiroyuki; Yoneyama, Tetsuo; Miyamura, Tatsuo; Pallansch, Mark; Kew, Olen

2003-01-01

From 1988 to 1993, 30 cases of poliomyelitis associated with poliovirus type 2 were found in seven governorates of Egypt. Because many of the cases were geographically and temporally clustered and because the case isolates differed antigenically from the vaccine strain, it was initially assumed that the cases signaled the continued circulation of wild type 2 poliovirus. However, comparison of sequences encoding the major capsid protein, VP1 (903 nucleotides), revealed that the isolates were related (93 to 97% nucleotide sequence identity) to the Sabin type 2 oral poliovirus vaccine (OPV) strain and unrelated (<82% nucleotide sequence identity) to the wild type 2 polioviruses previously indigenous to Egypt (last known isolate: 1979) or to any contemporary wild type 2 polioviruses found elsewhere. The rate and pattern of VP1 divergence among the circulating vaccine-derived poliovirus (cVDPV) isolates suggested that all lineages were derived from a single OPV infection that occurred around 1983 and that progeny from the initiating infection circulated for approximately a decade within Egypt along several independent chains of transmission. Complete genomic sequences of an early (1988) and a late (1993) cVDPV isolate revealed that their 5′ untranslated region (5′ UTR) and noncapsid- 3′ UTR sequences were derived from other species C enteroviruses. Circulation of type 2 cVDPVs occurred at a time of low OPV coverage in the affected communities and ceased when OPV coverage rates increased. The potential for cVDPVs to circulate in populations with low immunity to poliovirus has important implications for current and future strategies to eradicate polio worldwide. PMID:12857906

Circulation of endemic type 2 vaccine-derived poliovirus in Egypt from 1983 to 1993.

PubMed

Yang, Chen-Fu; Naguib, Tary; Yang, Su-Ju; Nasr, Eman; Jorba, Jaume; Ahmed, Nahed; Campagnoli, Ray; van der Avoort, Harrie; Shimizu, Hiroyuki; Yoneyama, Tetsuo; Miyamura, Tatsuo; Pallansch, Mark; Kew, Olen

2003-08-01

From 1988 to 1993, 30 cases of poliomyelitis associated with poliovirus type 2 were found in seven governorates of Egypt. Because many of the cases were geographically and temporally clustered and because the case isolates differed antigenically from the vaccine strain, it was initially assumed that the cases signaled the continued circulation of wild type 2 poliovirus. However, comparison of sequences encoding the major capsid protein, VP1 (903 nucleotides), revealed that the isolates were related (93 to 97% nucleotide sequence identity) to the Sabin type 2 oral poliovirus vaccine (OPV) strain and unrelated (<82% nucleotide sequence identity) to the wild type 2 polioviruses previously indigenous to Egypt (last known isolate: 1979) or to any contemporary wild type 2 polioviruses found elsewhere. The rate and pattern of VP1 divergence among the circulating vaccine-derived poliovirus (cVDPV) isolates suggested that all lineages were derived from a single OPV infection that occurred around 1983 and that progeny from the initiating infection circulated for approximately a decade within Egypt along several independent chains of transmission. Complete genomic sequences of an early (1988) and a late (1993) cVDPV isolate revealed that their 5' untranslated region (5' UTR) and noncapsid- 3' UTR sequences were derived from other species C enteroviruses. Circulation of type 2 cVDPVs occurred at a time of low OPV coverage in the affected communities and ceased when OPV coverage rates increased. The potential for cVDPVs to circulate in populations with low immunity to poliovirus has important implications for current and future strategies to eradicate polio worldwide.

Efficiency of circulant diallels via mixed models in the selection of papaya genotypes resistant to foliar fungal diseases.

PubMed

Vivas, M; Silveira, S F; Viana, A P; Amaral, A T; Cardoso, D L; Pereira, M G

2014-07-02

Diallel crossing methods provide information regarding the performance of genitors between themselves and their hybrid combinations. However, with a large number of parents, the number of hybrid combinations that can be obtained and evaluated become limited. One option regarding the number of parents involved is the adoption of circulant diallels. However, information is lacking regarding diallel analysis using mixed models. This study aimed to evaluate the efficacy of the method of linear mixed models to estimate, for variable resistance to foliar fungal diseases, components of general and specific combining ability in a circulant table with different s values. Subsequently, 50 diallels were simulated for each s value, and the correlations and estimates of the combining abilities of the different diallel combinations were analyzed. The circulant diallel method using mixed modeling was effective in the classification of genitors regarding their combining abilities relative to the complete diallels. The numbers of crosses in which each genitor(s) will compose the circulant diallel and the estimated heritability affect the combining ability estimates. With three crosses per parent, it is possible to obtain good concordance (correlation above 0.8) between the combining ability estimates.

Automated classification of dolphin echolocation click types from the Gulf of Mexico.

PubMed

Frasier, Kaitlin E; Roch, Marie A; Soldevilla, Melissa S; Wiggins, Sean M; Garrison, Lance P; Hildebrand, John A

2017-12-01

Delphinids produce large numbers of short duration, broadband echolocation clicks which may be useful for species classification in passive acoustic monitoring efforts. A challenge in echolocation click classification is to overcome the many sources of variability to recognize underlying patterns across many detections. An automated unsupervised network-based classification method was developed to simulate the approach a human analyst uses when categorizing click types: Clusters of similar clicks were identified by incorporating multiple click characteristics (spectral shape and inter-click interval distributions) to distinguish within-type from between-type variation, and identify distinct, persistent click types. Once click types were established, an algorithm for classifying novel detections using existing clusters was tested. The automated classification method was applied to a dataset of 52 million clicks detected across five monitoring sites over two years in the Gulf of Mexico (GOM). Seven distinct click types were identified, one of which is known to be associated with an acoustically identifiable delphinid (Risso's dolphin) and six of which are not yet identified. All types occurred at multiple monitoring locations, but the relative occurrence of types varied, particularly between continental shelf and slope locations. Automatically-identified click types from autonomous seafloor recorders without verifiable species identification were compared with clicks detected on sea-surface towed hydrophone arrays in the presence of visually identified delphinid species. These comparisons suggest potential species identities for the animals producing some echolocation click types. The network-based classification method presented here is effective for rapid, unsupervised delphinid click classification across large datasets in which the click types may not be known a priori.

Automated classification of dolphin echolocation click types from the Gulf of Mexico

PubMed Central

Roch, Marie A.; Soldevilla, Melissa S.; Wiggins, Sean M.; Garrison, Lance P.; Hildebrand, John A.

2017-01-01

Delphinids produce large numbers of short duration, broadband echolocation clicks which may be useful for species classification in passive acoustic monitoring efforts. A challenge in echolocation click classification is to overcome the many sources of variability to recognize underlying patterns across many detections. An automated unsupervised network-based classification method was developed to simulate the approach a human analyst uses when categorizing click types: Clusters of similar clicks were identified by incorporating multiple click characteristics (spectral shape and inter-click interval distributions) to distinguish within-type from between-type variation, and identify distinct, persistent click types. Once click types were established, an algorithm for classifying novel detections using existing clusters was tested. The automated classification method was applied to a dataset of 52 million clicks detected across five monitoring sites over two years in the Gulf of Mexico (GOM). Seven distinct click types were identified, one of which is known to be associated with an acoustically identifiable delphinid (Risso’s dolphin) and six of which are not yet identified. All types occurred at multiple monitoring locations, but the relative occurrence of types varied, particularly between continental shelf and slope locations. Automatically-identified click types from autonomous seafloor recorders without verifiable species identification were compared with clicks detected on sea-surface towed hydrophone arrays in the presence of visually identified delphinid species. These comparisons suggest potential species identities for the animals producing some echolocation click types. The network-based classification method presented here is effective for rapid, unsupervised delphinid click classification across large datasets in which the click types may not be known a priori. PMID:29216184

Circulating MOTS-c levels are decreased in obese male children and adolescents and associated with insulin resistance.

PubMed

Du, Caiqi; Zhang, Cai; Wu, Wei; Liang, Yan; Wang, Anru; Wu, Shimin; Zhao, Yue; Hou, Ling; Ning, Qin; Luo, Xiaoping

2018-04-25

A novel bioactive peptide, mitochondrial-derived peptide (MOTS-c), has recently attracted attention as a potential prevention or therapeutic option for obesity and type 2 diabetes mellitus (T2DM). MOTS-c profiles have not yet been reported in human obesity and T2DM. We aimed to determine circulating MOTS-c levels in obesity and explore the association between MOTS-c levels and various metabolic parameters. In this case-control study, 40 obese children and adolescents (27 males) and 57 controls (40 males) were recruited in the Hubei Province of China in 2017. Circulating MOTS-c levels were measured, clinical data (e.g., glucose, insulin and lipid profile) were recorded, and anthropometric measurements were performed. Finally, we investigated correlations between MOTS-c levels and related variables. MOTS-c levels were significantly decreased in the obese group compared with the control group (472.61 ± 22.83 ng/mL vs. 561.64 ± 19.19 ng/mL, p < 0.01). After classification by sex, MOTS-c levels were significantly decreased in obese male children and adolescents compared to their counterparts (465.26 ± 24.53 ng/mL vs. 584.07 ± 21.18 ng/mL, p < 0.001), while they were comparable between the obese and healthy female subjects (487.89 ± 49.77 ng/mL vs. 508.85 ± 38.76 ng/mL, p > 0.05). Further, MOTS-c levels were negatively correlated with body mass index (BMI), BMI standard deviation score, waist circumference, waist-to-hip ratio, fasting insulin level, HOMA-IR, and HbA1c in the male cohort. Circulating MOTS-c levels were decreased in obese male children and adolescents and correlated with markers of insulin resistance and obesity. This article is protected by copyright. All rights reserved.

HIV classification using the coalescent theory

PubMed Central

Bulla, Ingo; Schultz, Anne-Kathrin; Schreiber, Fabian; Zhang, Ming; Leitner, Thomas; Korber, Bette; Morgenstern, Burkhard; Stanke, Mario

2010-01-01

Motivation: Existing coalescent models and phylogenetic tools based on them are not designed for studying the genealogy of sequences like those of HIV, since in HIV recombinants with multiple cross-over points between the parental strains frequently arise. Hence, ambiguous cases in the classification of HIV sequences into subtypes and circulating recombinant forms (CRFs) have been treated with ad hoc methods in lack of tools based on a comprehensive coalescent model accounting for complex recombination patterns. Results: We developed the program ARGUS that scores classifications of sequences into subtypes and recombinant forms. It reconstructs ancestral recombination graphs (ARGs) that reflect the genealogy of the input sequences given a classification hypothesis. An ARG with maximal probability is approximated using a Markov chain Monte Carlo approach. ARGUS was able to distinguish the correct classification with a low error rate from plausible alternative classifications in simulation studies with realistic parameters. We applied our algorithm to decide between two recently debated alternatives in the classification of CRF02 of HIV-1 and find that CRF02 is indeed a recombinant of Subtypes A and G. Availability: ARGUS is implemented in C++ and the source code is available at http://gobics.de/software Contact: ibulla@uni-goettingen.de Supplementary Information: Supplementary data are available at Bioinformatics online. PMID:20400454

Stakeholders' perspectives on social participation in preschool children with Autism Spectrum Disorder.

PubMed

Germani, Tamara; Zwaigenbaum, Lonnie; Magill-Evans, Joyce; Hodgetts, Sandy; Ball, Geoff

2017-11-01

To determine (a) the essential components of social participation for preschool children with Autism Spectrum Disorder (ASD) using stakeholders' perspectives and (b) the facilitators and barriers experienced in promoting social participation. A mixed-methods, web-based survey utilizing the International Classification of Functioning, Disability and Health - Child and Youth version (ICF-CY) taxonomy was circulated across Canada through purposeful snowball sampling. Frequency analysis of the combined responses of 74 stakeholders revealed the most essential components of social participation were: (a) behavior management, (b) social interactions, and (c) various types of play. Further, content analysis revealed that stakeholders used intrinsic motivation strategies and contingency management to facilitate social participation. Stakeholders reported that the purpose of social participation was to engage the child in fun, enjoyable social activities that developed relationships between the child and peers and created a sense of belonging in the community.

Molecular typing of canine distemper virus strains reveals the presence of a new genetic variant in South America.

PubMed

Sarute, Nicolás; Pérez, Ruben; Aldaz, Jaime; Alfieri, Amauri A; Alfieri, Alice F; Name, Daniela; Llanes, Jessika; Hernández, Martín; Francia, Lourdes; Panzera, Yanina

2014-06-01

Canine distemper virus (CDV, Paramyxoviridae, Morbillivirus) is the causative agent of a severe infectious disease affecting terrestrial and marine carnivores worldwide. Phylogenetic relationships and the genetic variability of the hemagglutinin (H) protein and the fusion protein signal-peptide (Fsp) allow for the classification of field strains into genetic lineages. Currently, there are nine CDV lineages worldwide, two of them co-circulating in South America. Using the Fsp-coding region, we analyzed the genetic variability of strains from Uruguay, Brazil, and Ecuador, and compared them with those described previously in South America and other geographical areas. The results revealed that the Brazilian and Uruguayan strains belong to the already described South America lineage (EU1/SA1), whereas the Ecuadorian strains cluster in a new clade, here named South America 3, which may represent the third CDV lineage described in South America.

Analysis of the full-length VP2 protein of canine parvoviruses circulating in Hungary.

PubMed

Cságola, Attila; Varga, Szilvia; Lőrincz, Márta; Tuboly, Tamás

2014-09-01

In recent years, the number of cases of disease caused by canine parvovirus 2 (CPV-2) in vaccinated dogs has increased. The aim of the present study was to identify CPV-2 strains present in Hungary. Forty-two out of 50 faecal specimens examined were positive, and 25 VP2 sequences were determined and analysed. Based on the current classification, the Hungarian viruses belong to New CPV-2a type, except two viruses that are recombinants of vaccine viruses and CPV-2a strains. The Tyr324Ile alteration was detected for the first time in Europe, and a "Hungarian-specific" substitution (Ala516Thr) was also identified in this study. The immunologically important parts of the currently spreading canine parvoviruses were examined and found to differ greatly from the vaccine strains that are widely used in Hungary.

Modelling wildfire activity in Iberia with different Atmospheric Circulation WTs

NASA Astrophysics Data System (ADS)

Sousa, P. M.; Trigo, R.; Pereira, M. G.; Rasilla, D.; Gouveia, C.

2012-04-01

This work focuses on the spatial and temporal variability of burnt area (BA) for the entire Iberian Peninsula (IP) and on the construction of statistical models to reproduce the inter-annual variability, based on Weather Types Classification (WTC). A common BA dataset was assembled for the first time for the entire Iberian Peninsula, by merging BA records for the 66 administrative regions of Portugal and Spain. A normalization procedure was then applied to the various size regions before performing a k-means cluster analysis to identify large areas characterized by similar fire regimes. The most compelling results were obtained for 4 clusters (Northwestern, Northern, Southwestern and Eastern) whose spatial patterns and seasonal fire regimes are shown to be related with constraining factors such as topography, vegetation cover and climate conditions. The response of fire burnt surface at monthly time scales to both long-term climatic pre-conditions and short-term synoptic forcing was assessed through correlation and regression analysis using: (i) temperature and precipitation from 2 to 7 months in advance to fire peak season; (ii) synoptic weather patterns derived from 11 distinct classifications derived under the COSTaction-733. Different responses were obtained for each of the considered regions: (i) a relevant link between BA and short-term synoptic forcing (represented by monthly frequencies of WTC) was identified for all clusters; (ii) long-term climatic preconditioning was relevant for all but one cluster (Northern). Taking into account these links, we developed stepwise regression models with the aim of reproducing the observed BA series (i.e. in hindcast mode). These models were based on the best climatic and synoptic circulation predictors identified previously. All models were cross-validated and their performance varies between clusters, though models exclusively based on WTCs tend to better reproduce annual BA time series than those only based on pre-conditioning climatic information. Nevertheless, the best results are attained when both synoptic and climatic predictors are used simultaneously as predictors, in particular for the two western clusters, where correlation coefficient values are higher than 0.7. Finally, we have used WTC composite maps to characterize the typical synoptic configurations that favor high values of BA. These patterns correspond to dry and warm fluxes, associated with anticyclonic regimes, which foster fire ignition (Pereira et al., 2005). Pereira, M.G., Trigo, R.M., DaCamara, C.C., Pereira, J.M.C., Leite, S.M., 2005: "Synoptic patterns associated with large summer forest fires in Portugal". Agricultural and Forest Meteorology. 129, 11-25. COST733, 2011: "COST 733 Wiki - Harmonisation and Applications of Weather Type Classifications for European regions or COST733 spatial domains for Europe". Available at http://geo21.geo.uni-augsburg.de/cost733wiki/Cost733_Wiki_Main [accessed 1 September 2011].

Analysis of biliary anatomy according to different classification systems.

PubMed

Deka, Pranjal; Islam, Mahibul; Jindal, Deepti; Kumar, Niteen; Arora, Ankur; Negi, Sanjay Singh

2014-01-01

Variations in biliary anatomy are common, and different classifications have been described. These classification systems have not been compared to each other in a single cohort. We report such variations in biliary anatomy on magnetic resonance cholangiopancreatography (MRCP) using six different classification systems. In 299 patients undergoing MRCP for various indications, biliary anatomy was classified as described by Couinaud (1957), Huang (1996), Karakas (2008), Choi (2003), Champetier (1994), and Ohkubo (2004). Correlation with direct cholangiography and vascular anatomy was done. Bile duct dimensions were measured. Cystic duct junction and pancreaticobiliary ductal junction (PBDJ) were classified. Normal biliary anatomy was noted in 57.8 %. The most common variants were Couinaud type D2, Choi type 3A, Huang type A1, Champetier type a, Ohkubo types D and J, and Karakas type 2a. The Ohkubo classification was the most appropriate; 3.1 % of right ducts and 6.3 % of left ducts with variant anatomy could not be classified using the Ohkubo classification. There was a good agreement between MRCP and direct cholangiography (ĸ = 0.9). Anomalous PBDJ was noted in 8.7 %. Variant biliary anatomy was not associated with gender (p = 0.194) or variant vascular anatomy (p = 0.24). Although each classification system has its merits and demerits, some anatomical variations cannot be classified using any of the previously described classifications. The Ohkubo classification system is the most applicable as it considers most clinically relevant variations pertinent to hepatobiliary surgery.

[Mechanisms of immune deposit formation in glomerulonephritis].

PubMed

Bussolati, B; Camussi, G

1996-03-01

Recent experimental studies allowed the identification of several mechanisms of immune deposit formation, which are able to reproduce the morphological and clinical pattern of human glomerulonephritis. Moreover, it was shown that most of the lesions considered, in the past, as due to circulating immune complexes (IC), are instead caused by the "in situ" formation of IC. As a result of these studies, the following schematic classification was proposed: 1) immune deposits formed by glomerular localization of IC primarily formed in the circulation; 2) immune deposits formed "in situ" by reaction of circulating antibodies with fixed structural antigens; 3) immune deposits formed "in situ" by antibodies reactive with movable structural antigens; 4) immune deposits formed "in situ" by antibodies reactive with sequestered antigens leaking out of tissues; 5) IC formed "in situ" by antibodies reactive with exogenous or non-glomerular endogenous antigens planted in the glomeruli; 6) ANCA-associated glomerular disease.

Posterior Circulation Moyamoya Disease versus Primitive Vertebral-Basilar Artery System Moyamoya Disease: New Classification of Moyamoya Disease from the Perspective of Embryology.

PubMed

Tan, Cunxin; Duan, Ran; Ye, Xun; Zhang, Dong; Wang, Rong

2016-12-01

Moyamoya disease (MMD) is a chronic cerebrovascular disorder with little known etiology. We aim to propose a new classification system for MMD from the perspective of embryology. MMD patients' digital subtraction angiograms were retrospectively analyzed. Every angiogram was analyzed to find the abnormal vessels and from which part of the posterior cerebral artery (PCA) the lesions begin. In 262 MMD cases, 32 pediatric patients had PCA involvement, of which 17 were male and 15 were female; 68 adults had PCA involvement, of which 33 were male and 35 were female. The initially affected part of the PCA was compared between sexes and between pediatric and adult patients, and the findings are not statistically significant (P = 0.233, P = 0.855, P = 0.343, respectively). However, of the 100 cases with PCA involvement, only 4 had the lesions begin from the first part of the PCA, and all of the 4 cases had the basilar artery lesions. All the other 96 cases had the lesions begin from the second part of the PCA or from the posterior communication artery, which is derived from the caudal ramus of the primitive intracarotid artery, leaving the first part of the PCA and basilar artery excluded from affection. MMD should be classified into primitive intracarotid artery system-involved type and primitive vertebral basilar artery system-involved type. The reason that the vertebral basilar artery is so rarely involved in MMD might be because of its late development in the brain. Copyright © 2016 Elsevier Inc. All rights reserved.

The groningen laryngomalacia classification system--based on systematic review and dynamic airway changes.

PubMed

van der Heijden, Martijn; Dikkers, Frederik G; Halmos, Gyorgy B

2015-12-01

Laryngomalacia is the most common cause of dyspnea and stridor in newborn infants. Laryngomalacia is a dynamic change of the upper airway based on abnormally pliable supraglottic structures, which causes upper airway obstruction. In the past, different classification systems have been introduced. Until now no classification system is widely accepted and applied. Our goal is to provide a simple and complete classification system based on systematic literature search and our experiences. Retrospective cohort study with literature review. All patients with laryngomalacia under the age of 5 at time of diagnosis were included. Photo and video documentation was used to confirm diagnosis and characteristics of dynamic airway change. Outcome was compared with available classification systems in literature. Eighty-five patients were included. In contrast to other classification systems, only three typical different dynamic changes have been identified in our series. Two existing classification systems covered 100% of our findings, but there was an unnecessary overlap between different types in most of the systems. Based on our finding, we propose a new a classification system for laryngomalacia, which is purely based on dynamic airway changes. The groningen laryngomalacia classification is a new, simplified classification system with three types, based on purely dynamic laryngeal changes, tested in a tertiary referral center: Type 1: inward collapse of arytenoids cartilages, Type 2: medial displacement of aryepiglottic folds, and Type 3: posterocaudal displacement of epiglottis against the posterior pharyngeal wall. © 2015 Wiley Periodicals, Inc.

Automated classification of mouse pup isolation syllables: from cluster analysis to an Excel-based "mouse pup syllable classification calculator".

PubMed

Grimsley, Jasmine M S; Gadziola, Marie A; Wenstrup, Jeffrey J

2012-01-01

Mouse pups vocalize at high rates when they are cold or isolated from the nest. The proportions of each syllable type produced carry information about disease state and are being used as behavioral markers for the internal state of animals. Manual classifications of these vocalizations identified 10 syllable types based on their spectro-temporal features. However, manual classification of mouse syllables is time consuming and vulnerable to experimenter bias. This study uses an automated cluster analysis to identify acoustically distinct syllable types produced by CBA/CaJ mouse pups, and then compares the results to prior manual classification methods. The cluster analysis identified two syllable types, based on their frequency bands, that have continuous frequency-time structure, and two syllable types featuring abrupt frequency transitions. Although cluster analysis computed fewer syllable types than manual classification, the clusters represented well the probability distributions of the acoustic features within syllables. These probability distributions indicate that some of the manually classified syllable types are not statistically distinct. The characteristics of the four classified clusters were used to generate a Microsoft Excel-based mouse syllable classifier that rapidly categorizes syllables, with over a 90% match, into the syllable types determined by cluster analysis.

Predictors for Symptomatic Intracranial Hemorrhage After Endovascular Treatment of Acute Ischemic Stroke.

PubMed

Hao, Yonggang; Yang, Dong; Wang, Huaiming; Zi, Wenjie; Zhang, Meng; Geng, Yu; Zhou, Zhiming; Wang, Wei; Xu, Haowen; Tian, Xiguang; Lv, Penghua; Liu, Yuxiu; Xiong, Yunyun; Liu, Xinfeng; Xu, Gelin

2017-05-01

Symptomatic intracranial hemorrhage (SICH) pose a major safety concern for endovascular treatment of acute ischemic stroke. This study aimed to evaluate the risk and related factors of SICH after endovascular treatment in a real-world practice. Patients with stroke treated with stent-like retrievers for recanalizing a blocked artery in anterior circulation were enrolled from 21 stroke centers in China. Intracranial hemorrhage was classified as symptomatic and asymptomatic ones according to Heidelberg Bleeding Classification. Logistic regression was used to identify predictors for SICH. Of the 632 enrolled patients, 101 (16.0%) were diagnosed with SICH within 72 hours after endovascular treatment. Ninety-day mortality was higher in patients with SICH than in patients without SICH (65.3% versus 18.8%; P <0.001). On multivariate analysis, baseline neutrophil ratio >0.83 (odds ratio [OR], 2.07; 95% confidence interval [CI], 1.24-3.46), pretreatment Alberta Stroke Program Early Computed Tomography Score of <6 (OR, 2.27; 95% CI, 1.24-4.14), stroke of cardioembolism type (OR, 1.91; 95% CI, 1.13-3.25), poor collateral circulation (OR, 1.97; 95% CI, 1.16-3.36), delay from symptoms onset to groin puncture >270 minutes (OR, 1.70; 95% CI, 1.03-2.80), >3 passes with retriever (OR, 2.55; 95% CI, 1.40-4.65) were associated with SICH after endovascular treatment. Incidence of SICH after thrombectomy is higher in Asian patients with acute ischemic stroke. Cardioembolic stroke, poor collateral circulation, delayed endovascular treatment, multiple passes with stent retriever device, lower pretreatment Alberta Stroke Program Early Computed Tomography Score, higher baseline neutrophil ratio may increase the risk of SICH. © 2017 American Heart Association, Inc.

HIV-1 group O infection in Cameroon from 2006 to 2013: Prevalence, genetic diversity, evolution and public health challenges

PubMed Central

Villabona-Arenas, Christian Julian; Domyeum, Jenny; Mouacha, Fatima; Butel, Christelle; Delaporte, Eric; Peeters, Martine; Mpoudi-Ngole, Eitel; Aghokeng, Avelin Fobang

2015-01-01

The human immunodeficiency virus, HIV, is characterized by a tremendously high genetic diversity, leading to the currently known circulating HIV types, groups, subtypes, and recombinant forms. HIV-1 group O is one of the most diverse forms of HIV-1 and has been so far related to Cameroon or individuals originating from Cameroon. In this study, we investigated in Cameroon, the evolution of this viral group from 2006 to 2013, in terms of prevalence, genetic diversity and public health implications. Our results confirmed the predominance of HIV-1 group M (98.5%), a very low prevalence (<0.02%) for HIV-1 group N and P, and HIV-2 in this country. HIV-1 group O was found at around 0.6% (95% confidence interval: 0.4–0.8%), indicating that the frequency of this virus in Cameroon has remained stable over the last decades. However, we found an extensive high genetic diversity within this HIV-1 group, that resulted from previous steady increase on the effective number of HIV-1 group O infections through time, and the current distribution of the circulating viral strains still does not allow classification as subtypes. The frequency of dual infections with HIV-1 group M and group O was 0.8% (95% confidence interval: 0.6–1.0%), but we found no recombinant forms in co-infected patients. Natural resistance to integrase inhibitors was not identified, although we found several mutations considered as natural polymorphisms. Our study shows that infections with HIV-1 group O can be adequately managed in countries where the virus circulates, but this complex virus still represents a challenge for diagnostics and monitoring strategies. PMID:26371064

Spatio-temporal characteristics of the diurnal precipitation cycle over Sweden and the linkage to large-scale circulation

NASA Astrophysics Data System (ADS)

Walther, A.; Jeong, J.-H.; Chen, D.

2009-04-01

Rainfall events exhibit diurnal cycle in both frequency and amount, of which phase and amplitude show substantial geographic and seasonal variation. Although the diurnal cycle of precipitation is one of the fundamental characteristics to determine local weather and climate, most of sophisticated climate models still have great deficiencies in reproducing it. Thus more exact understanding of the diurnal precipitation cycle and its mechanisms is thought to be very important to improve climate models and their prediction results. In this work we investigate the diurnal cycle of precipitation in Sweden using ground based hourly observations for 1996-2008. For the precipitation amount and frequency, mean diurnal cycles are computed, and the peak timing and amplitude of the diurnal and semi-diurnal cycle of precipitation are estimated by the harmonic analysis method. Clear mean diurnal precipitation cycles as well as distinct spatial patterns for all seasons are derived. In summer, showing the most distinct pattern, the majority of the stations show a clear rainfall maximum in the afternoon (12-18 LST) except for the coastal part of Central Sweden where we see an early-morning peak (00-06 LST) and the east coast of southern Sweden where we find a morning peak (06-12 LST). The clear afternoon peak may be due to high insolation accumulated during the day time in summer leading to a local convection activity later on that day. These coastal bands mostly consist of the stations closest to the Baltic Sea. Meso-scale convection connected to temperature differences between sea and land combined with a favorable wind pattern seems to play a role here. In the transition seasons, spring and autumn, the amplitude is weaker and the spatial pattern of peak timing is less distinct than in summer. In spring the westcoast stations have a morning peak and stations in southeastern Sweden show an afternoon peak. In autumn we see a zonal division with a clear afternoon peak in southern Sweden. This might be due to a steeply decreasing energy input from the solar insolation in the northern parts causing less convection activity but still enough insolation to cause an afternoon peak in southern Sweden. In both seasons, spring and autumn, north of 60 degrees the pattern is mixed showing early-morning, morning and afternoon peaks. The winter pattern is characterized by afternoon peaks along the eastcoast and central South Sweden and morning peaks over the most of the other parts of the country. However, the amplitude of the diurnal cycle is much weaker compared to that in summer or autumn. In order to examine the large scale circulation which might modulate the diurnal cycle, the Lamb weather types are computed based on sea level pressure fields from the NCEP/NCAR reanalysis 2 dataset with daily and 6-hourly resolution, respectively. The Lamb types based on 6-hourly SLP underline the high temporal variability of atmospheric conditions over the research area. Throughout all seasons, on about 45% of the days two or more circulation classes are different. In 6.3% (JJA) to 8.4% (DJF) of the days can observe 4 different Lamb classes. Using Lamb types with 6-hourly resolution leads to a somewhat finer classification. On average, for about one third of the days with precipitation the daily Lamb type and the appropriate 6-hourly one are different. The most frequent large-scale circulation classes coupled to precipitation events are of cyclonic or directional type. The atmospheric circulation patterns do not follow a diurnal cycle, whereas the local observed precipitation does. Knowledge about the timing of the rainfall is important in order to assign the right underlying circulation patterns to precipitation events.

Influence of Climate on PM2.5 Concentrations over Europe : a Meteorological Analysis using a 9-year Model Simulation

NASA Astrophysics Data System (ADS)

Lecoeur, À.; Seigneur, C.; Terray, L.; Pagé, C.

2012-04-01

In the early 1970s, it has been demonstrated that a large number of deaths and health problems are associated with particulate pollution. As a consequence, several governments have set health-based air quality standards to protect public health. Particulate matter with an aerodynamical diameter of 2.5 μg.m-3 or less (PM2.5) is particularly concerned by these measures. As PM2.5 concentrations are strongly dependent on meteorological conditions, it is important to investigate the relationships between PM2.5 and meteorological parameters. This will help to understand the processes at play and anticipate the effects of climate change on PM2.5 air quality. Most of the previous work agree that temperature, wind speed, humidity, rain rate and mixing height are the meteorological variables that impact PM2.5 concentrations the most. A large number of those studies used Global Circulation Models (GCM) and Chemical Transport Models (CTM) and focus on the USA. They typically predict a diminution of PM2.5 concentrations in the future, with some geographical and/or temporal discrepancies, when only the climate evolution is considered. When considering changes in emissions along with climate, no consensus has yet been found. Furthermore, the correlations between PM2.5 concentrations and meteorological variables are often low, which prevents a straightforward analysis of their relationships. In this work, we consider that PM2.5 concentrations depend on both large-scale atmospheric circulation and local meteorological variables. We thus investigate the influence of present climate on PM2.5 concentrations over Europe by representing it using a weather regimes/types approach. We start by exploring the relationships between classical weather regimes, meteorological variables and PM2.5 concentrations over five stations in Europe, using the EMEP air quality database. The pressure at sea level is used in the classification as it effectively describes the atmospheric circulation. We experimentally verify some intuitive results: weather regimes associated with weak (resp. high) precipitation, wind and low (resp. high) temperatures correspond to higher (resp. lower) PM2.5 concentrations. We also observe that rain rate is the variable that impacts PM2.5 concentrations the most. Next, we search for better relationships by adding this second variable to the classification: we therefore build new weather regimes, called weather types. Because of the low number of the EMEP observations, we compute PM2.5 concentrations with the Polyphemus/Polair3D CTM for years between 2000 and 2008 in order to obtain a spatially and temporally complete dataset of PM2.5 concentrations and chemical components, which can be used to relate PM2.5 concentrations to meteorological regimes and specific variables. By classifying both a large-scale variable and a local variable that influence the PM2.5 concentrations and using gridded data of the modeled concentrations of PM2.5, we obtain a more robust analysis. The results of this work will provide the basis to predict the effects of climate change (via the evolution of weather regimes/types frequencies) on PM2.5 chemical composition and concentrations.

Drought Variability in Eastern Part of Romania and its Connection with Large-Scale Air Circulation

NASA Astrophysics Data System (ADS)

Barbu, Nicu; Stefan, Sabina; Georgescu, Florinela

2014-05-01

Drought is a phenomenon that appears due to precipitation deficit and it is intensified by strong winds, high temperatures, low relative humidity and high insolation; in fact, all these factors lead to increasing of evapotranspiration processes that contribute to soil water deficit. The Standardized Precipitation Evapotranspiration Index (SPEI) take into account all this factors listed above. The temporal variability of the drought in Eastern part of Romania for 50 years, during the period 1961-2010, is investigated. This study is focused on the drought variability related to large scale air circulation. The gridded dataset with spatial resolution of 0.5º lat/lon of SPEI, (https://digital.csic.es/handle/10261/72264) were used to analyze drought periods in connection with large scale air circulation determinate from the two catalogues (GWT - GrossWetter-Typen and WLK - WetterLargenKlassifikation) defined in COST733Action. The GWT catalogue uses at input dataset the sea level pressure and the WLK catalogue uses as input dataset the geopotential field at 925 hPa and 500 hPa, wind at 700 hPa and total water content for entire atmospheric column. In this study we use the GWT catalogue with 18 circulation types and the WLK catalogue with 40 circulation types. The analysis for Barlad Hydrological Basin indicated that the negative values (that means water deficit - drought period) of SPEI are associated with prevailing anticyclonic regime and positive values (that means water excess - rainy period) of SPEI are associated with prevailing cyclonic regime as was expected. In last decade was observed an increase of dry period associated with an increase of anticyclonic activity over Romania. Using GWT18 catalogue the drought are associated with the north-eastern anticyclonic circulation type (NE-A). According to the WLK40 catalogue, the dominant circulation type associated with the drought is north-west-anticyclonic-dry anticyclonic (NW-AAD) type. keywords: drought, SPEI, large-scale atmospheric circulation

Mendelian Randomization Studies Do Not Support a Role for Raised Circulating Triglyceride Levels Influencing Type 2 Diabetes, Glucose Levels, or Insulin Resistance

PubMed Central

De Silva, N. Maneka G.; Freathy, Rachel M.; Palmer, Tom M.; Donnelly, Louise A.; Luan, Jian'an; Gaunt, Tom; Langenberg, Claudia; Weedon, Michael N.; Shields, Beverley; Knight, Beatrice A.; Ward, Kirsten J.; Sandhu, Manjinder S.; Harbord, Roger M.; McCarthy, Mark I.; Smith, George Davey; Ebrahim, Shah; Hattersley, Andrew T.; Wareham, Nicholas; Lawlor, Debbie A.; Morris, Andrew D.; Palmer, Colin N.A.; Frayling, Timothy M.

2011-01-01

OBJECTIVE The causal nature of associations between circulating triglycerides, insulin resistance, and type 2 diabetes is unclear. We aimed to use Mendelian randomization to test the hypothesis that raised circulating triglyceride levels causally influence the risk of type 2 diabetes and raise normal fasting glucose levels and hepatic insulin resistance. RESEARCH DESIGN AND METHODS We tested 10 common genetic variants robustly associated with circulating triglyceride levels against the type 2 diabetes status in 5,637 case and 6,860 control subjects and four continuous outcomes (reflecting glycemia and hepatic insulin resistance) in 8,271 nondiabetic individuals from four studies. RESULTS Individuals carrying greater numbers of triglyceride-raising alleles had increased circulating triglyceride levels (SD 0.59 [95% CI 0.52–0.65] difference between the 20% of individuals with the most alleles and the 20% with the fewest alleles). There was no evidence that the carriers of greater numbers of triglyceride-raising alleles were at increased risk of type 2 diabetes (per weighted allele odds ratio [OR] 0.99 [95% CI 0.97–1.01]; P = 0.26). In nondiabetic individuals, there was no evidence that carriers of greater numbers of triglyceride-raising alleles had increased fasting insulin levels (SD 0.00 per weighted allele [95% CI −0.01 to 0.02]; P = 0.72) or increased fasting glucose levels (0.00 [−0.01 to 0.01]; P = 0.88). Instrumental variable analyses confirmed that genetically raised circulating triglyceride levels were not associated with increased diabetes risk, fasting glucose, or fasting insulin and, for diabetes, showed a trend toward a protective association (OR per 1-SD increase in log10 triglycerides: 0.61 [95% CI 0.45–0.83]; P = 0.002). CONCLUSIONS Genetically raised circulating triglyceride levels do not increase the risk of type 2 diabetes or raise fasting glucose or fasting insulin levels in nondiabetic individuals. One explanation for our results is that raised circulating triglycerides are predominantly secondary to the diabetes disease process rather than causal. PMID:21282362

Mendelian randomization studies do not support a role for raised circulating triglyceride levels influencing type 2 diabetes, glucose levels, or insulin resistance.

PubMed

De Silva, N Maneka G; Freathy, Rachel M; Palmer, Tom M; Donnelly, Louise A; Luan, Jian'an; Gaunt, Tom; Langenberg, Claudia; Weedon, Michael N; Shields, Beverley; Knight, Beatrice A; Ward, Kirsten J; Sandhu, Manjinder S; Harbord, Roger M; McCarthy, Mark I; Smith, George Davey; Ebrahim, Shah; Hattersley, Andrew T; Wareham, Nicholas; Lawlor, Debbie A; Morris, Andrew D; Palmer, Colin N A; Frayling, Timothy M

2011-03-01

The causal nature of associations between circulating triglycerides, insulin resistance, and type 2 diabetes is unclear. We aimed to use Mendelian randomization to test the hypothesis that raised circulating triglyceride levels causally influence the risk of type 2 diabetes and raise normal fasting glucose levels and hepatic insulin resistance. We tested 10 common genetic variants robustly associated with circulating triglyceride levels against the type 2 diabetes status in 5,637 case and 6,860 control subjects and four continuous outcomes (reflecting glycemia and hepatic insulin resistance) in 8,271 nondiabetic individuals from four studies. Individuals carrying greater numbers of triglyceride-raising alleles had increased circulating triglyceride levels (SD 0.59 [95% CI 0.52-0.65] difference between the 20% of individuals with the most alleles and the 20% with the fewest alleles). There was no evidence that the carriers of greater numbers of triglyceride-raising alleles were at increased risk of type 2 diabetes (per weighted allele odds ratio [OR] 0.99 [95% CI 0.97-1.01]; P = 0.26). In nondiabetic individuals, there was no evidence that carriers of greater numbers of triglyceride-raising alleles had increased fasting insulin levels (SD 0.00 per weighted allele [95% CI -0.01 to 0.02]; P = 0.72) or increased fasting glucose levels (0.00 [-0.01 to 0.01]; P = 0.88). Instrumental variable analyses confirmed that genetically raised circulating triglyceride levels were not associated with increased diabetes risk, fasting glucose, or fasting insulin and, for diabetes, showed a trend toward a protective association (OR per 1-SD increase in log(10) triglycerides: 0.61 [95% CI 0.45-0.83]; P = 0.002). Genetically raised circulating triglyceride levels do not increase the risk of type 2 diabetes or raise fasting glucose or fasting insulin levels in nondiabetic individuals. One explanation for our results is that raised circulating triglycerides are predominantly secondary to the diabetes disease process rather than causal.

Differences in forest area classification based on tree tally from variable- and fixed-radius plots

Treesearch

David Azuma; Vicente J. Monleon

2011-01-01

In forest inventory, it is not enough to formulate a definition; it is also necessary to define the "measurement procedure." In the classification of forestland by dominant cover type, the measurement design (the plot) can affect the outcome of the classification. We present results of a simulation study comparing classification of the dominant cover type...

The circulation pattern and day-night heat transport in the atmosphere of a synchronously rotating aquaplanet: Dependence on planetary rotation rate

NASA Astrophysics Data System (ADS)

Noda, S.; Ishiwatari, M.; Nakajima, K.; Takahashi, Y. O.; Takehiro, S.; Onishi, M.; Hashimoto, G. L.; Kuramoto, K.; Hayashi, Y.-Y.

2017-01-01

In order to investigate a possible variety of atmospheric states realized on a synchronously rotating aquaplanet, an experiment studying the impact of planetary rotation rate is performed using an atmospheric general circulation model (GCM) with simplified hydrological and radiative processes. The entire planetary surface is covered with a swamp ocean. The value of planetary rotation rate is varied from zero to the Earth's, while other parameters such as planetary radius, mean molecular weight and total mass of atmospheric dry components, and solar constant are set to the present Earth's values. The integration results show that the atmosphere reaches statistically equilibrium states for all runs; none of the calculated cases exemplifies the runaway greenhouse state. The circulation patterns obtained are classified into four types: Type-I characterized by the dominance of a day-night thermally direct circulation, Type-II characterized by a zonal wave number one resonant Rossby wave over a meridionally broad westerly jet on the equator, Type-III characterized by a long time scale north-south asymmetric variation, and Type-IV characterized by a pair of mid-latitude westerly jets. With the increase of planetary rotation rate, the circulation evolves from Type-I to Type-II and then to Type-III gradually and smoothly, whereas the change from Type-III to Type-IV is abrupt and discontinuous. Over a finite range of planetary rotation rate, both Types-III and -IV emerge as statistically steady states, constituting multiple equilibria. In spite of the substantial changes in circulation, the net energy transport from the day side to the night side remains almost insensitive to planetary rotation rate, although the partition into dry static energy and latent heat energy transports changes. The reason for this notable insensitivity is that the outgoing longwave radiation over the broad area of the day side is constrained by the radiation limit of a moist atmosphere, so that the transport to the night side, which is determined as the difference between the incoming solar radiation and the radiation limit, cannot change greatly.

The exceptionally wet year of 2014 over Greece: a statistical and synoptical-atmospheric analysis over the region of Thessaloniki

NASA Astrophysics Data System (ADS)

Tolika, Konstantia; Maheras, Panagiotis; Anagnostopoulou, Christina

2018-05-01

The highest rainfall totals (912.2 mm) and the largest number of raindays (133 days), since 1958, were recorded in Thessaloniki during the year of 2014. Extreme precipitation heights were also observed on a seasonal, monthly and daily basis. The examined year presented the highest daily rainfall intensity, the maximum daily precipitation and the largest number of heavy precipitation days (greater than 10 mm), and it also exceeded the previous amounts of precipitation of very wet (95th percentile) and extremely wet (99th percentile) days. According to the automatic circulation type classification scheme that was used, it was found that during this exceptionally wet year, the frequency of occurrence of cyclonic types at the near surface geopotential level increases, while the same types decreased at a higher atmospheric level (500 hPa). The prevailing type was type C which is located at the centre of the study area (Greece), but several other cyclonic types changed during this year not only their frequency but also their percentage of rainfall as well as their daily precipitation intensity. It should be highlighted that these findings differentiated on the seasonal-scale analysis. Moreover, out of the three teleconnection patterns that were examined (Scandinavian Pattern, Eastern Mediterranean Teleconnection Pattern and North Sea-Caspian Pattern), the Scandinavian one (SCAND) was detected during the most of the months of 2014 meaning that it was highly associated with intense precipitation over Greece.

Generalized Rainich conditions, generalized stress-energy conditions, and the Hawking-Ellis classification

NASA Astrophysics Data System (ADS)

Martín–Moruno, Prado; Visser, Matt

2017-11-01

The (generalized) Rainich conditions are algebraic conditions which are polynomial in the (mixed-component) stress-energy tensor. As such they are logically distinct from the usual classical energy conditions (NEC, WEC, SEC, DEC), and logically distinct from the usual Hawking-Ellis (Segré-Plebański) classification of stress-energy tensors (type I, type II, type III, type IV). There will of course be significant inter-connections between these classification schemes, which we explore in the current article. Overall, we shall argue that it is best to view the (generalized) Rainich conditions as a refinement of the classical energy conditions and the usual Hawking-Ellis classification.

Research of Sleep Disorders in Patients with Acute Cerebral Infarction.

PubMed

Chen, Xiaofang; Bi, Hongye; Zhang, Meiyun; Liu, Haiyan; Wang, Xueying; Zu, Ruonan

2015-11-01

The purpose of this study is to investigate the incidence of sleep disorders (SD), characteristic of cerebral infarction patients with different parts affected. The research selected 101 patients with a first occurrence of acute cerebral infarction as the experimental group, and 86 patients without cerebral infarction as controls. Polysomnography, Pittsburgh Sleep Quality Index, Epworth Sleepiness Scale, and US National Stroke Scale were assessed. Compared with control group, the incidence of SD was higher in experimental group (P < .05), and the incidence of SD in women was more frequent in experimental group (P < .05). There was no significant difference in the types of SD patients with acute cerebral infarction. In addition, the sleep quality of cerebral infarction patients with different parts affected was different: the sleep quality of left hemisphere infarction patients was poor compared with the right one, and the sleep quality of anterior circulation patients was poor compared with posterior circulation patients. Patients with thalamus infarction had a longer sleep time and a shorter sleep latency and stage 2 of non-rapid eye movement sleep compared with non-thalamus infarction group. The prevalence of SD was relatively high in acute cerebral infarction patients, and the detailed classification of acute cerebral infarction may provide a more effective therapeutic method and therefore relieve patients' pain and supply a better quality of sleep. Copyright © 2015 National Stroke Association. Published by Elsevier Inc. All rights reserved.

46 CFR 164.018-3 - Classification.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 6 2011-10-01 2011-10-01 false Classification. 164.018-3 Section 164.018-3 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) EQUIPMENT, CONSTRUCTION, AND MATERIALS... Classification. The following types of retroreflective material are approved under this specification: (a) Type I...

46 CFR 164.018-3 - Classification.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 6 2012-10-01 2012-10-01 false Classification. 164.018-3 Section 164.018-3 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) EQUIPMENT, CONSTRUCTION, AND MATERIALS... Classification. The following types of retroreflective material are approved under this specification: (a) Type I...

46 CFR 164.018-3 - Classification.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 6 2013-10-01 2013-10-01 false Classification. 164.018-3 Section 164.018-3 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) EQUIPMENT, CONSTRUCTION, AND MATERIALS... Classification. The following types of retroreflective material are approved under this specification: (a) Type I...

46 CFR 164.018-3 - Classification.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 6 2014-10-01 2014-10-01 false Classification. 164.018-3 Section 164.018-3 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) EQUIPMENT, CONSTRUCTION, AND MATERIALS... Classification. The following types of retroreflective material are approved under this specification: (a) Type I...

46 CFR 164.018-3 - Classification.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 6 2010-10-01 2010-10-01 false Classification. 164.018-3 Section 164.018-3 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) EQUIPMENT, CONSTRUCTION, AND MATERIALS... Classification. The following types of retroreflective material are approved under this specification: (a) Type I...

Temperature extremes in Alaska: temporal variability and circulation background

NASA Astrophysics Data System (ADS)

Sulikowska, Agnieszka; Walawender, Jakub P.; Walawender, Ewelina

2018-06-01

The aims of this study are to characterize the spatial and temporal variability of extremely warm days (WDs) and warm spells (WSs) in summer as well as extremely cold days (CDs) and cold spells (CSs) in winter in Alaska in the years 1951-2015 and to determine the role of atmospheric circulation in their occurrence. The analysis is performed using daily temperature maxima (T MAX) and minima (T MIN) measured at 10 weather stations in Alaska as well as mean daily values of sea level pressure and wind direction at the 850 hPa isobaric level. WD (CD) is defined as a day with T MAX above the 95th (T MIN below the 5th) percentile of a probability density function calculated from observations, and WS (CS) equals at least three consecutive WDs (CDs). Frequency of the occurrence and severity of warm and cold extremes as well as duration of WSs and CSs is analyzed. In order to characterize synoptic conditions during temperature extremes, the objective classification scheme of advection types considering jointly the direction of the air influx and type of pressure system is employed. The results show that the general trend is towards the warmer temperatures, and the warming is greater in the winter than summer and for T MAX as opposed to T MIN. This is reflected in changes in the frequency of occurrence and intensity of temperature extremes which are much more pronounced in the case of winter cold extremes (decreasing tendencies) than summer warm extremes (increasing tendencies). The occurrence of temperature extremes is generally favored by anticyclonic weather with advection direction indicating air mass flows from the interior of the North American continent as well as the south (warm extremes in summer) and north (cold extremes in winter).

Anti-cyclonic circulation driven by the estuarine circulation in a gulf type ROFI

NASA Astrophysics Data System (ADS)

Fujiwara, T.; Sanford, L. P.; Nakatsuji, K.; Sugiyama, Y.

1997-08-01

Baroclinic residual circulation processes are examined in gulf type Regions Of Freshwater Influence (ROFIs), which have large rivers discharging into a rounded head wider than the Rossby internal deformation radius. Theoretical and observational investigations concentrate on Ise Bay, Japan, with supporting data from Osaka Bay and Tokyo Bay. Simplified analytical solutions are derived to describe the primary features of the circulation. Three dimensional residual current data collected using moored current meters and shipboard acoustic doppler current profilers (ADCPs), satellite imagery and density structure data observed using STDs, are presented for comparison to the theoretical predictions. There are three key points to understanding the resulting circulation in gulf type ROFIs. First, there are likely to be three distinct water masses: the river plume, a brackish upper layer, and a higher salinity lower layer. Second, baroclinic processes in gulf type ROFIs are influenced by the Earth's rotation at first order. Residual currents are quasi-geostrophic and potential vorticity is approximately conserved. Third, the combined effects of a classical longitudinal estuarine circulation and the Earth's rotation are both necessary to produce the resulting circulation. Anti-cyclonic vorticity is generated in the upper layer by the horizontal divergence associated with upward entrainment, which is part of the estuarine circulation. The interaction between anti-cyclonic vorticity and horizontal divergence results in two regions of qualitatively different circulation, with gyre-like circulation near the bay head and uniformly seaward anti-cyclonicly sheared flow further towards the mouth. The stagnation point separating the two regions is closer to (further away from) the bay head for stronger (weaker) horizontal divergence, respectively. The vorticity and spin-up time of this circulation are-(ƒ-ω 1)/2 and h/2w 0, respectively, where ƒ is the Coriolis parameter, ω 1 is the vorticity of the lower layer, h is the depth of the upper layer and w 0 is the upward entrainment velocity across the pycnocline. Under high discharge conditions the axis of the river plume proceeds in a right bounded direction, describing an inertial circle clearly seen in satellite images. Under low discharge conditions the river plume is deflected in a left bounded direction by the anti-cyclonic circulation of the upper layer.

An investigation of anticyclonic circulation in the southern Gulf of Riga during the spring period

NASA Astrophysics Data System (ADS)

Soosaar, Edith; Maljutenko, Ilja; Raudsepp, Urmas; Elken, Jüri

2014-04-01

Previous studies of the gulf-type Region of Freshwater Influence (ROFI) have shown that circulation near the area of freshwater inflow sometimes becomes anticyclonic. Such a circulation is different from basic coastal ocean buoyancy-driven circulation where an anticyclonic bulge develops near the source and a coastal current is established along the right hand coast (in the northern hemisphere), resulting in the general cyclonic circulation. The spring (from March to June) circulation and spreading of river discharge water in the southern Gulf of Riga (GoR) in the Baltic Sea was analyzed based on the results of a 10-year simulation (1997-2006) using the General Estuarine Transport Model (GETM). Monthly mean currents in the upper layer of the GoR revealed a double gyre structure dominated either by an anticyclonic or cyclonic gyre in the near-head southeastern part and corresponding cyclonic/anticyclonic gyre in the near-mouth northwestern part of the gulf. Time series analysis of PCA and vorticity, calculated from velocity data and model sensitivity tests, showed that in spring the anticyclonic circulation in the upper layer of the southern GoR is driven primarily by the estuarine type density field. This anticyclonic circulation is enhanced by easterly winds but blocked or even reversed by westerly winds. The estuarine type density field is maintained by salt flux in the northwestern connection to the Baltic Proper and river discharge in the southern GoR.

An investigation of anticyclonic circulation in the southern Gulf of Riga during the spring period

NASA Astrophysics Data System (ADS)

Soosaar, Edith; Maljutenko, Ilja; Raudsepp, Urmas; Elken, Jüri

2015-04-01

Previous studies of the gulf-type Region of Freshwater Influence (ROFI) have shown that circulation near the area of freshwater inflow sometimes becomes anticyclonic. Such a circulation is different from basic coastal ocean buoyancy-driven circulation where an anticyclonic bulge develops near the source and a coastal current is established along the right hand coast (in the northern hemisphere), resulting in the general cyclonic circulation. The spring (from March to June) circulation and spreading of river discharge water in the southern Gulf of Riga (GoR) in the Baltic Sea was analyzed based on the results of a 10-year simulation (1997-2006) using the General Estuarine Transport Model (GETM). Monthly mean currents in the upper layer of the GoR revealed a double gyre structure dominated either by an anticyclonic or cyclonic gyre in the near-head southeastern part and corresponding cyclonic/anticyclonic gyre in the near-mouth northwestern part of the gulf. Time series analysis of PCA and vorticity, calculated from velocity data and model sensitivity tests, showed that in spring the anticyclonic circulation in the upper layer of the southern GoR is driven primarily by the estuarine type density field. This anticyclonic circulation is enhanced by easterly winds but blocked or even reversed by westerly winds. The estuarine type density field is maintained by salt flux in the northwestern connection to the Baltic Proper and river discharge in the southern GoR.

Sub-pixel image classification for forest types in East Texas

NASA Astrophysics Data System (ADS)

Westbrook, Joey

Sub-pixel classification is the extraction of information about the proportion of individual materials of interest within a pixel. Landcover classification at the sub-pixel scale provides more discrimination than traditional per-pixel multispectral classifiers for pixels where the material of interest is mixed with other materials. It allows for the un-mixing of pixels to show the proportion of each material of interest. The materials of interest for this study are pine, hardwood, mixed forest and non-forest. The goal of this project was to perform a sub-pixel classification, which allows a pixel to have multiple labels, and compare the result to a traditional supervised classification, which allows a pixel to have only one label. The satellite image used was a Landsat 5 Thematic Mapper (TM) scene of the Stephen F. Austin Experimental Forest in Nacogdoches County, Texas and the four cover type classes are pine, hardwood, mixed forest and non-forest. Once classified, a multi-layer raster datasets was created that comprised four raster layers where each layer showed the percentage of that cover type within the pixel area. Percentage cover type maps were then produced and the accuracy of each was assessed using a fuzzy error matrix for the sub-pixel classifications, and the results were compared to the supervised classification in which a traditional error matrix was used. The overall accuracy of the sub-pixel classification using the aerial photo for both training and reference data had the highest (65% overall) out of the three sub-pixel classifications. This was understandable because the analyst can visually observe the cover types actually on the ground for training data and reference data, whereas using the FIA (Forest Inventory and Analysis) plot data, the analyst must assume that an entire pixel contains the exact percentage of a cover type found in a plot. An increase in accuracy was found after reclassifying each sub-pixel classification from nine classes with 10 percent interval each to five classes with 20 percent interval each. When compared to the supervised classification which has a satisfactory overall accuracy of 90%, none of the sub-pixel classification achieved the same level. However, since traditional per-pixel classifiers assign only one label to pixels throughout the landscape while sub-pixel classifications assign multiple labels to each pixel, the traditional 85% accuracy of acceptance for pixel-based classifications should not apply to sub-pixel classifications. More research is needed in order to define the level of accuracy that is deemed acceptable for sub-pixel classifications.

X-chromosomal inactivation directly influences the phenotypic manifestation of X-linked protoporphyria

PubMed Central

Brancaleoni, V.; Balwani, M.; Granata, F.; Graziadei, G.; Missineo, P.; Fiorentino, V.; Fustinoni, S.; Cappellini, M.D.; Naik, H.; Desnick, R.J.; Di Pierro, E.

2015-01-01

X-linked protoporphyria (XLP), a rare erythropoietic porphyria, results from terminal exon gain-of-function mutations in the ALAS2 gene causing increased ALAS2 activity and markedly increased erythrocyte protoporphyrin levels. Patients present with severe cutaneous photosensitivity and may develop liver dysfunction. XLP was originally reported as X-linked dominant with 100% penetrance in males and females. We characterized 11 heterozygous females from six unrelated XLP families and show markedly varying phenotypic and biochemical heterogeneity, reflecting the degree of X-chromsomal inactivation of the mutant gene. ALAS2 sequencing identified the specific mutation and confirmed heterozygosity among the females. Clinical history, plasma and erythrocyte protoporphyrin levels were determined. Methylation assays of the androgen receptor and zinc-finger MYM type 3 short tandem repeat polymorphisms estimated each heterozygotes X-chromosomal inactivation pattern. Heterozygotes with equal or increased skewing, favoring expression of the wild-type allele had no clinical symptoms and only slightly increased erythrocyte protoporphyrin concentrations and/or frequency of protoporphyrin-containing peripheral blood fluorocytes. When the wild-type allele was preferentially inactivated, heterozygous females manifested the disease phenotype and had both higher erythrocyte protoporphyrin levels and circulating fluorocytes. These findings confirm that the previous dominant classification of XLP is inappropriate and genetically misleading, as the disorder is more appropriately designated XLP. PMID:25615817

Classification and reduction of pilot error

NASA Technical Reports Server (NTRS)

Rogers, W. H.; Logan, A. L.; Boley, G. D.

1989-01-01

Human error is a primary or contributing factor in about two-thirds of commercial aviation accidents worldwide. With the ultimate goal of reducing pilot error accidents, this contract effort is aimed at understanding the factors underlying error events and reducing the probability of certain types of errors by modifying underlying factors such as flight deck design and procedures. A review of the literature relevant to error classification was conducted. Classification includes categorizing types of errors, the information processing mechanisms and factors underlying them, and identifying factor-mechanism-error relationships. The classification scheme developed by Jens Rasmussen was adopted because it provided a comprehensive yet basic error classification shell or structure that could easily accommodate addition of details on domain-specific factors. For these purposes, factors specific to the aviation environment were incorporated. Hypotheses concerning the relationship of a small number of underlying factors, information processing mechanisms, and error types types identified in the classification scheme were formulated. ASRS data were reviewed and a simulation experiment was performed to evaluate and quantify the hypotheses.

Influence of cross-sectional ratio of down comer to riser on the efficiency of liquid circulation in loop air lift bubble column

NASA Astrophysics Data System (ADS)

Yamamoto, Tatsumi; Kawasaki, Hiroyuki; Mori, Hidetoshi

2017-11-01

Loop type bubble columns have good performance of liquid circulation and mass transfer by airlift effect, where the liquid circulation time is an important measurable characteristic parameter. This parameter is affected by the column construction, the aspect ratio of the column, the cross-sectional area ratio of down comer to riser (R), and the superficial gas velocity in the riser (UGR). In this work, the mean gas holdup and the liquid circulation time (TC) have been measured in four types of loop airlift type bubble column: concentric tube internal loop airlift type, rectangular internal loop airlift type, external loop airlift type, external loop airlift with separator. Air and tap water were used as gas and liquid phase, respectively. The results have demonstrated that the mean gas holdup in riser increases in proportion to UGR, and that it in downcomer changes according to the geometric parameters of each bubble column. TC has been found to conform to an empirical equation which depends on UGR and the length of draft tube or division plate in the region of 0.33 < R < 1.

Fully Convolutional Networks for Ground Classification from LIDAR Point Clouds

NASA Astrophysics Data System (ADS)

Rizaldy, A.; Persello, C.; Gevaert, C. M.; Oude Elberink, S. J.

2018-05-01

Deep Learning has been massively used for image classification in recent years. The use of deep learning for ground classification from LIDAR point clouds has also been recently studied. However, point clouds need to be converted into an image in order to use Convolutional Neural Networks (CNNs). In state-of-the-art techniques, this conversion is slow because each point is converted into a separate image. This approach leads to highly redundant computation during conversion and classification. The goal of this study is to design a more efficient data conversion and ground classification. This goal is achieved by first converting the whole point cloud into a single image. The classification is then performed by a Fully Convolutional Network (FCN), a modified version of CNN designed for pixel-wise image classification. The proposed method is significantly faster than state-of-the-art techniques. On the ISPRS Filter Test dataset, it is 78 times faster for conversion and 16 times faster for classification. Our experimental analysis on the same dataset shows that the proposed method results in 5.22 % of total error, 4.10 % of type I error, and 15.07 % of type II error. Compared to the previous CNN-based technique and LAStools software, the proposed method reduces the total error and type I error (while type II error is slightly higher). The method was also tested on a very high point density LIDAR point clouds resulting in 4.02 % of total error, 2.15 % of type I error and 6.14 % of type II error.

Current Assessment and Classification of Suicidal Phenomena using the FDA 2012 Draft Guidance Document on Suicide Assessment: A Critical Review.

PubMed

Sheehan, David V; Giddens, Jennifer M; Sheehan, Kathy Harnett

2014-09-01

Standard international classification criteria require that classification categories be comprehensive to avoid type II error. Categories should be mutually exclusive and definitions should be clear and unambiguous (to avoid type I and type II errors). In addition, the classification system should be robust enough to last over time and provide comparability between data collections. This article was designed to evaluate the extent to which the classification system contained in the United States Food and Drug Administration 2012 Draft Guidance for the prospective assessment and classification of suicidal ideation and behavior in clinical trials meets these criteria. A critical review is used to assess the extent to which the proposed categories contained in the Food and Drug Administration 2012 Draft Guidance are comprehensive, unambiguous, and robust. Assumptions that underlie the classification system are also explored. The Food and Drug Administration classification system contained in the 2012 Draft Guidance does not capture the full range of suicidal ideation and behavior (type II error). Definitions, moreover, are frequently ambiguous (susceptible to multiple interpretations), and the potential for misclassification (type I and type II errors) is compounded by frequent mismatches in category titles and definitions. These issues have the potential to compromise data comparability within clinical trial sites, across sites, and over time. These problems need to be remedied because of the potential for flawed data output and consequent threats to public health, to research on the safety of medications, and to the search for effective medication treatments for suicidality.

CCR investigators use liquid biopsies to uncover cancer in the blood of lymphoma patients | Center for Cancer Research

Cancer.gov

CCR investigators are using circulating tumor DNA (ctDNA) as a type of noninvasive liquid biopsy for patients with diffuse large B-cell lymphoma (DLBCL), the most common type of non-Hodgkin lymphoma. are using circulating tumor DNA (ctDNA) as a type of noninvasive liquid biopsy for patients with diffuse large B-cell lymphoma (DLBCL), the most common type of non-Hodgkin lymphoma.

CCR investigators use liquid biopsies to uncover cancer in the blood of lymphoma patients | Center for Cancer Research

Cancer.gov

CCR investigators are using circulating tumor DNA (ctDNA) as a type of noninvasive liquid biopsy for patients with diffuse large B-cell lymphoma (DLBCL), the most common type of non-Hodgkin lymphoma. are using circulating tumor DNA (ctDNA) as a type of noninvasive liquid biopsy for patients with diffuse large B-cell lymphoma (DLBCL), the most common type of non-Hodgkin

A comparative agreement evaluation of two subaxial cervical spine injury classification systems: the AOSpine and the Allen and Ferguson schemes.

PubMed

Urrutia, Julio; Zamora, Tomas; Campos, Mauricio; Yurac, Ratko; Palma, Joaquin; Mobarec, Sebastian; Prada, Carlos

2016-07-01

We performed an agreement study using two subaxial cervical spine classification systems: the AOSpine and the Allen and Ferguson (A&F) classifications. We sought to determine which scheme allows better agreement by different evaluators and by the same evaluator on different occasions. Complete imaging studies of 65 patients with subaxial cervical spine injuries were classified by six evaluators (three spine sub-specialists and three senior orthopaedic surgery residents) using the AOSpine subaxial cervical spine classification system and the A&F scheme. The cases were displayed in a random sequence after a 6-week interval for repeat evaluation. The Kappa coefficient (κ) was used to determine inter- and intra-observer agreement. Inter-observer: considering the main AO injury types, the agreement was substantial for the AOSpine classification [κ = 0.61 (0.57-0.64)]; using AO sub-types, the agreement was moderate [κ = 0.57 (0.54-0.60)]. For the A&F classification, the agreement [κ = 0.46 (0.42-0.49)] was significantly lower than using the AOSpine scheme. Intra-observer: the agreement was substantial considering injury types [κ = 0.68 (0.62-0.74)] and considering sub-types [κ = 0.62 (0.57-0.66)]. Using the A&F classification, the agreement was also substantial [κ = 0.66 (0.61-0.71)]. No significant differences were observed between spine surgeons and orthopaedic residents in the overall inter- and intra-observer agreement, or in the inter- and intra-observer agreement of specific type of injuries. The AOSpine classification (using the four main injury types or at the sub-types level) allows a significantly better agreement than the A&F classification. The A&F scheme does not allow reliable communication between medical professionals.

Classification and description of world formation types

Treesearch

D. Faber-Langendoen; T. Keeler-Wolf; D. Meidinger; C. Josse; A. Weakley; D. Tart; G. Navarro; B. Hoagland; S. Ponomarenko; G. Fults; Eileen Helmer

2016-01-01

An ecological vegetation classification approach has been developed in which a combination of vegetation attributes (physiognomy, structure, and floristics) and their response to ecological and biogeographic factors are used as the basis for classifying vegetation types. This approach can help support international, national, and subnational classification efforts. The...

[Burden of influenza virus type B and mismatch with the flu vaccine in Spain].

PubMed

Eiros-Bouza, Jose Ma; Pérez-Rubio, Alberto

2015-02-01

Since the 80s two lineages of type B viruses are co - circulating in the world. Antigenic differences between them are important and it leads to lack of cross-reactivity. The impact on the burden of disease due to influenza B virus, poor foresight in estimating which of the two lineages of B viruses circulate in the season, and the consequent lack of immunity in case of including the wrong strain make that the availability of the quadrivalent vaccine is very useful. The aim of this paper is to analyze the past influenza seasons in Spain to assess the burden of disease, divergence between the vaccine strain and the circulating B and viral characteristics associated with type B in each seasonal epidemic. Review of all reports issued by the Influenza Surveillance System in Spain since the 2003-2004 season to 2012-2013. Over the past influenza seasons, although type A was present mostly, circulation of influenza B virus in each season was observed, even being co - dominant in some of them. In a high number of seasons the divergence between the vaccine strain and the circulating strain lineage has been observed The protective effect of influenza vaccine has varied depending on the type / subtype of influenza virus studied. The vaccine effectiveness against influenza infection by influenza B virus has varied greatly depending on the season analyzed.

Taxonomy of asteroids. [according to polarimetric, spectrophotometric, radiometric, and UBV photometric data

NASA Technical Reports Server (NTRS)

Bowell, E.; Chapman, C. R.; Gradie, J. C.; Zellner, B.; Morrison, D.

1978-01-01

A taxonomic system for asteroids is discussed which is based on seven directly observable parameters from polarimetry, spectrophotometry, radiometry, and UBV photometry. The classification scheme is entirely empirical and independent of specific mineralogical interpretations. Five broad classes (designated C, S, M, E, and R), as well as an 'unclassifiable' designation, are defined on the basis of observational data for 523 asteroids. Computer-generated type classifications and derived diameters are given for the 523 asteroids, and the application of the classification procedure is illustrated. Of the 523 asteroids classified, 190 are identified as C objects, 141 as S type, 13 as type M, three as type E, three as type R, 55 as unclassifiable, and 118 as ambiguous. The present taxonomic system is compared with several other asteroid classification systems.

A conceptual weather-type classification procedure for the Philadelphia, Pennsylvania, area

USGS Publications Warehouse

McCabe, Gregory J.

1990-01-01

A simple method of weather-type classification, based on a conceptual model of pressure systems that pass through the Philadelphia, Pennsylvania, area, has been developed. The only inputs required for the procedure are daily mean wind direction and cloud cover, which are used to index the relative position of pressure systems and fronts to Philadelphia.Daily mean wind-direction and cloud-cover data recorded at Philadelphia, Pennsylvania, from January 1954 through August 1988 were used to categorize daily weather conditions. The conceptual weather types reflect changes in daily air and dew-point temperatures, and changes in monthly mean temperature and monthly and annual precipitation. The weather-type classification produced by using the conceptual model was similar to a classification produced by using a multivariate statistical classification procedure. Even though the conceptual weather types are derived from a small amount of data, they appear to account for the variability of daily weather patterns sufficiently to describe distinct weather conditions for use in environmental analyses of weather-sensitive processes.

[An object-based information extraction technology for dominant tree species group types].

PubMed

Tian, Tian; Fan, Wen-yi; Lu, Wei; Xiao, Xiang

2015-06-01

Information extraction for dominant tree group types is difficult in remote sensing image classification, howevers, the object-oriented classification method using high spatial resolution remote sensing data is a new method to realize the accurate type information extraction. In this paper, taking the Jiangle Forest Farm in Fujian Province as the research area, based on the Quickbird image data in 2013, the object-oriented method was adopted to identify the farmland, shrub-herbaceous plant, young afforested land, Pinus massoniana, Cunninghamia lanceolata and broad-leave tree types. Three types of classification factors including spectral, texture, and different vegetation indices were used to establish a class hierarchy. According to the different levels, membership functions and the decision tree classification rules were adopted. The results showed that the method based on the object-oriented method by using texture, spectrum and the vegetation indices achieved the classification accuracy of 91.3%, which was increased by 5.7% compared with that by only using the texture and spectrum.

Convolutional neural network with transfer learning for rice type classification

NASA Astrophysics Data System (ADS)

Patel, Vaibhav Amit; Joshi, Manjunath V.

2018-04-01

Presently, rice type is identified manually by humans, which is time consuming and error prone. Therefore, there is a need to do this by machine which makes it faster with greater accuracy. This paper proposes a deep learning based method for classification of rice types. We propose two methods to classify the rice types. In the first method, we train a deep convolutional neural network (CNN) using the given segmented rice images. In the second method, we train a combination of a pretrained VGG16 network and the proposed method, while using transfer learning in which the weights of a pretrained network are used to achieve better accuracy. Our approach can also be used for classification of rice grain as broken or fine. We train a 5-class model for classifying rice types using 4000 training images and another 2- class model for the classification of broken and normal rice using 1600 training images. We observe that despite having distinct rice images, our architecture, pretrained on ImageNet data boosts classification accuracy significantly.

Elite Circulation and the Convertibility of Knowledge: Comparing Different Types and Forms of Knowledge and Degrees of Elite Circulation in Europe

ERIC Educational Resources Information Center

Mangset, Marte

2017-01-01

According to classical elite theory, increased circulation is related to increased integration which is thought to increase elites' power. Based on a comparative analysis of some European countries' elite education systems, recruitment to elite positions and degrees of circulation--with a specific focus on administrative elites--this article…

Habitat typing versus advanced vegetation classification in western forests

Treesearch

Tony Kusbach; John Shaw; James Long; Helga Van Miegroet

2012-01-01

Major habitat and community types in northern Utah were compared with plant alliances and associations that were derived from fidelity- and diagnostic-species classification concepts. Each of these classification approaches was associated with important environmental factors. Within a 20,000-ha watershed, 103 forest ecosystems were described by physiographic features,...

Classifying Adverse Events in the Dental Office.

PubMed

Kalenderian, Elsbeth; Obadan-Udoh, Enihomo; Maramaldi, Peter; Etolue, Jini; Yansane, Alfa; Stewart, Denice; White, Joel; Vaderhobli, Ram; Kent, Karla; Hebballi, Nutan B; Delattre, Veronique; Kahn, Maria; Tokede, Oluwabunmi; Ramoni, Rachel B; Walji, Muhammad F

2017-06-30

Dentists strive to provide safe and effective oral healthcare. However, some patients may encounter an adverse event (AE) defined as "unnecessary harm due to dental treatment." In this research, we propose and evaluate two systems for categorizing the type and severity of AEs encountered at the dental office. Several existing medical AE type and severity classification systems were reviewed and adapted for dentistry. Using data collected in previous work, two initial dental AE type and severity classification systems were developed. Eight independent reviewers performed focused chart reviews, and AEs identified were used to evaluate and modify these newly developed classifications. A total of 958 charts were independently reviewed. Among the reviewed charts, 118 prospective AEs were found and 101 (85.6%) were verified as AEs through a consensus process. At the end of the study, a final AE type classification comprising 12 categories, and an AE severity classification comprising 7 categories emerged. Pain and infection were the most common AE types representing 73% of the cases reviewed (56% and 17%, respectively) and 88% were found to cause temporary, moderate to severe harm to the patient. Adverse events found during the chart review process were successfully classified using the novel dental AE type and severity classifications. Understanding the type of AEs and their severity are important steps if we are to learn from and prevent patient harm in the dental office.

A statistical approach to root system classification.

PubMed

Bodner, Gernot; Leitner, Daniel; Nakhforoosh, Alireza; Sobotik, Monika; Moder, Karl; Kaul, Hans-Peter

2013-01-01

Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for "plant functional type" identification in ecology can be applied to the classification of root systems. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. The study demonstrates that principal component based rooting types provide efficient and meaningful multi-trait classifiers. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems) is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Rooting types emerging from measured data, mainly distinguished by diameter/weight and density dominated types. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement techniques are essential.

Production, quality and quality assurance of Refuse Derived Fuels (RDFs).

PubMed

Sarc, R; Lorber, K E

2013-09-01

This contribution describes characterization, classification, production, application and quality assurance of Refuse Derived Fuels (RDFs) that are increasingly used in a wide range of co-incineration plants. It is shown in this paper, that the fuel-parameter, i.e. net calorific value [MJ/kg(OS)], particle size d(90) or d(95) [mm], impurities [w%], chlorine content [w%], sulfur content [w%], fluorine content [w%], ash content [w%], moisture [w%] and heavy metals content [mg/kg(DM)], can be preferentially used for the classification of different types of RDF applied for co-incineration and substitution of fossil-fuel in different industial sectors. Describing the external production of RDF by processing and confectioning of wastes as well as internal processing of waste at the incineration plant, a case study is reported on the application of RDF made out of different household waste fractions in a 120,000t/yr Waste to Energy (WtE) circulating fluidized bed (CFB) incinerator. For that purpose, delivered wastes, as well as incinerator feedstock material (i.e. after internal waste processing) are extensively investigated. Starting with elaboration of sampling plan in accordance with the relevant guidelines and standards, waste from different suppliers was sampled. Moreover, manual sorting analyses and chemical analyses were carried out. Finally, results of investigations are presented and discussed in the paper. Copyright © 2013 Elsevier Ltd. All rights reserved.

Classification of change detection and change blindness from near-infrared spectroscopy signals

NASA Astrophysics Data System (ADS)

Tanaka, Hirokazu; Katura, Takusige

2011-08-01

Using a machine-learning classification algorithm applied to near-infrared spectroscopy (NIRS) signals, we classify a success (change detection) or a failure (change blindness) in detecting visual changes for a change-detection task. Five subjects perform a change-detection task, and their brain activities are continuously monitored. A support-vector-machine algorithm is applied to classify the change-detection and change-blindness trials, and correct classification probability of 70-90% is obtained for four subjects. Two types of temporal shapes in classification probabilities are found: one exhibiting a maximum value after the task is completed (postdictive type), and another exhibiting a maximum value during the task (predictive type). As for the postdictive type, the classification probability begins to increase immediately after the task completion and reaches its maximum in about the time scale of neuronal hemodynamic response, reflecting a subjective report of change detection. As for the predictive type, the classification probability shows an increase at the task initiation and is maximal while subjects are performing the task, predicting the task performance in detecting a change. We conclude that decoding change detection and change blindness from NIRS signal is possible and argue some future applications toward brain-machine interfaces.

Evaluation of a stream channel-type system for southeast Alaska.

Treesearch

M.D. Bryant; P.E. Porter; S.J. Paustian

1991-01-01

Nine channel types within a hierarchical channel-type classification system (CTCS) were surveyed to determine relations between salmonid densities and species distribution, and channel type. Two other habitat classification systems and the amount of large woody debris also were compared to species distribution and salmonid densities, and to stream channel types....

Indirect downscaling of global circulation model data based on atmospheric circulation and temperature for projections of future precipitation in hourly resolution

NASA Astrophysics Data System (ADS)

Beck, F.; Bárdossy, A.

2013-07-01

Many hydraulic applications like the design of urban sewage systems require projections of future precipitation in high temporal resolution. We developed a method to predict the regional distribution of hourly precipitation sums based on daily mean sea level pressure and temperature data from a Global Circulation Model. It is an indirect downscaling method avoiding uncertain precipitation data from the model. It is based on a fuzzy-logic classification of atmospheric circulation patterns (CPs) that is further subdivided by means of the average daily temperature. The observed empirical distributions at 30 rain gauges to each CP-temperature class are assumed as constant and used for projections of the hourly precipitation sums in the future. The method was applied to the CP-temperature sequence derived from the 20th century run and the scenario A1B run of ECHAM5. According to ECHAM5, the summers in southwest Germany will become progressively drier. Nevertheless, the frequency of the highest hourly precipitation sums will increase. According to the predictions, estival water stress and the risk of extreme hourly precipitation will both increase simultaneously during the next decades.

A Comparative Study of Charges Made Through an Automated Circulation System in the Colorado State University Libraries.

ERIC Educational Resources Information Center

Burns, Robert W.

To determine use of portions of the collections at Colorado State University libraries and to identify heavily used sections, the collections were divided into 204 blocks according to Library of Congress classification letters. The number of charges made in each block was counted during a 1975 quarter for patrons, charges made to the reserve desk,…

The distance function effect on k-nearest neighbor classification for medical datasets.

PubMed

Hu, Li-Yu; Huang, Min-Wei; Ke, Shih-Wen; Tsai, Chih-Fong

2016-01-01

K-nearest neighbor (k-NN) classification is conventional non-parametric classifier, which has been used as the baseline classifier in many pattern classification problems. It is based on measuring the distances between the test data and each of the training data to decide the final classification output. Since the Euclidean distance function is the most widely used distance metric in k-NN, no study examines the classification performance of k-NN by different distance functions, especially for various medical domain problems. Therefore, the aim of this paper is to investigate whether the distance function can affect the k-NN performance over different medical datasets. Our experiments are based on three different types of medical datasets containing categorical, numerical, and mixed types of data and four different distance functions including Euclidean, cosine, Chi square, and Minkowsky are used during k-NN classification individually. The experimental results show that using the Chi square distance function is the best choice for the three different types of datasets. However, using the cosine and Euclidean (and Minkowsky) distance function perform the worst over the mixed type of datasets. In this paper, we demonstrate that the chosen distance function can affect the classification accuracy of the k-NN classifier. For the medical domain datasets including the categorical, numerical, and mixed types of data, K-NN based on the Chi square distance function performs the best.

A discrimlnant function approach to ecological site classification in northern New England

Treesearch

James M. Fincher; Marie-Louise Smith

1994-01-01

Describes one approach to ecologically based classification of upland forest community types of the White and Green Mountain physiographic regions. The classification approach is based on an intensive statistical analysis of the relationship between the communities and soil-site factors. Discriminant functions useful in distinguishing between types based on soil-site...

Creating a classification of image types in the medical literature for visual categorization

NASA Astrophysics Data System (ADS)

Müller, Henning; Kalpathy-Cramer, Jayashree; Demner-Fushman, Dina; Antani, Sameer

2012-02-01

Content-based image retrieval (CBIR) from specialized collections has often been proposed for use in such areas as diagnostic aid, clinical decision support, and teaching. The visual retrieval from broad image collections such as teaching files, the medical literature or web images, by contrast, has not yet reached a high maturity level compared to textual information retrieval. Visual image classification into a relatively small number of classes (20-100) on the other hand, has shown to deliver good results in several benchmarks. It is, however, currently underused as a basic technology for retrieval tasks, for example, to limit the search space. Most classification schemes for medical images are focused on specific areas and consider mainly the medical image types (modalities), imaged anatomy, and view, and merge them into a single descriptor or classification hierarchy. Furthermore, they often ignore other important image types such as biological images, statistical figures, flowcharts, and diagrams that frequently occur in the biomedical literature. Most of the current classifications have also been created for radiology images, which are not the only types to be taken into account. With Open Access becoming increasingly widespread particularly in medicine, images from the biomedical literature are more easily available for use. Visual information from these images and knowledge that an image is of a specific type or medical modality could enrich retrieval. This enrichment is hampered by the lack of a commonly agreed image classification scheme. This paper presents a hierarchy for classification of biomedical illustrations with the goal of using it for visual classification and thus as a basis for retrieval. The proposed hierarchy is based on relevant parts of existing terminologies, such as the IRMA-code (Image Retrieval in Medical Applications), ad hoc classifications and hierarchies used in imageCLEF (Image retrieval task at the Cross-Language Evaluation Forum) and NLM's (National Library of Medicine) OpenI. Furtheron, mappings to NLM's MeSH (Medical Subject Headings), RSNA's RadLex (Radiological Society of North America, Radiology Lexicon), and the IRMA code are also attempted for relevant image types. Advantages derived from such hierarchical classification for medical image retrieval are being evaluated through benchmarks such as imageCLEF, and R&D systems such as NLM's OpenI. The goal is to extend this hierarchy progressively and (through adding image types occurring in the biomedical literature) to have a terminology for visual image classification based on image types distinguishable by visual means and occurring in the medical open access literature.

Forest succession on four habitat types in western Montana

Treesearch

Stephen F. Arno; Dennis G. Simmerman; Robert E. Keane

1985-01-01

Presents classifications of successional community types on four major forest habitat types in western Montana. Classifications show the sequences of seral community types developing after stand-replacing wildfire and clearcutting with broadcast burning, mechanical scarification, or no followup treatment. Information is provided for associating vegetational response to...

Residual Circulation and Temperature Changes during the Evolution of Stratospheric Sudden Warmings Revealed in MERRA

NASA Astrophysics Data System (ADS)

Song, Byeong-Gwon; Chun, Hye-Yeong; Kim, Young-Ha

2015-04-01

A composite analysis for 21 stratospheric sudden warming (SSW) cases in 1979-2012 northern winter is performed using the MERRA reanalysis in order to investigate the changes in residual circulation and temperature during the SSW evolution. The SSW cases are classified as Type-1 and Type-2, based on the relative amplitude of planetary waves with zonal wavenumbers 1 and 2. The residual circulation induced by each forcing term in the transformed Eulerian mean (TEM) equation and the temperature advection associated with the circulation are calculated for both types of SSW. It is found that strong poleward and downward motion exists in the polar stratosphere just before the central date of SSW, which is induced primarily by the Eliassen-Palm flux divergence forcing (EPD). Gravity-wave drag (GWD) induces strong poleward and downward motion in the lower mesosphere. The temperature advection is significantly increased in the stratosphere before the central date of the SSW, as a result of the strong downward motion due to the EPD. However, the temperature change in the lower mesosphere is small despite the strong downward motion, because the vertical gradient of the potential temperature is relatively small at these altitudes. The temperature change in the stratosphere before the SSW is more rapid for Type-2 than Type-1. After the central date of SSW, the polar stratospheric temperature is recovered primarily by diabatic heating rather than by the residual circulation associated with wave forcing. Difference in the speed of temperature recovery between the two types of SSW is not significant.

Cluster Method Analysis of K. S. C. Image

NASA Technical Reports Server (NTRS)

Rodriguez, Joe, Jr.; Desai, M.

1997-01-01

Information obtained from satellite-based systems has moved to the forefront as a method in the identification of many land cover types. Identification of different land features through remote sensing is an effective tool for regional and global assessment of geometric characteristics. Classification data acquired from remote sensing images have a wide variety of applications. In particular, analysis of remote sensing images have special applications in the classification of various types of vegetation. Results obtained from classification studies of a particular area or region serve towards a greater understanding of what parameters (ecological, temporal, etc.) affect the region being analyzed. In this paper, we make a distinction between both types of classification approaches although, focus is given to the unsupervised classification method using 1987 Thematic Mapped (TM) images of Kennedy Space Center.

Type 2 diabetes associated changes in the plasma non-esterified fatty acids, oxylipins and endocannabinoids

USDA-ARS?s Scientific Manuscript database

Type 2 diabetes (T2D) has profound effects on metabolism that can be detected in plasma. While increases in circulating non-esterified fatty acids (NEFA) are well described in T2D, effects on circulating signaling lipids have received little attention. Oxylipins and endocannabinoids are classes of ...

Recognition of Banknote Fitness Based on a Fuzzy System Using Visible Light Reflection and Near-infrared Light Transmission Images.

PubMed

Kwon, Seung Yong; Pham, Tuyen Danh; Park, Kang Ryoung; Jeong, Dae Sik; Yoon, Sungsoo

2016-06-11

Fitness classification is a technique to assess the quality of banknotes in order to determine whether they are usable. Banknote classification techniques are useful in preventing problems that arise from the circulation of substandard banknotes (such as recognition failures, or bill jams in automated teller machines (ATMs) or bank counting machines). By and large, fitness classification continues to be carried out by humans, and this can cause the problem of varying fitness classifications for the same bill by different evaluators, and requires a lot of time. To address these problems, this study proposes a fuzzy system-based method that can reduce the processing time needed for fitness classification, and can determine the fitness of banknotes through an objective, systematic method rather than subjective judgment. Our algorithm was an implementation to actual banknote counting machine. Based on the results of tests on 3856 banknotes in United States currency (USD), 3956 in Korean currency (KRW), and 2300 banknotes in Indian currency (INR) using visible light reflection (VR) and near-infrared light transmission (NIRT) imaging, the proposed method was found to yield higher accuracy than prevalent banknote fitness classification methods. Moreover, it was confirmed that the proposed algorithm can operate in real time, not only in a normal PC environment, but also in an embedded system environment of a banknote counting machine.

Recognition of Banknote Fitness Based on a Fuzzy System Using Visible Light Reflection and Near-infrared Light Transmission Images

PubMed Central

Kwon, Seung Yong; Pham, Tuyen Danh; Park, Kang Ryoung; Jeong, Dae Sik; Yoon, Sungsoo

2016-01-01

Fitness classification is a technique to assess the quality of banknotes in order to determine whether they are usable. Banknote classification techniques are useful in preventing problems that arise from the circulation of substandard banknotes (such as recognition failures, or bill jams in automated teller machines (ATMs) or bank counting machines). By and large, fitness classification continues to be carried out by humans, and this can cause the problem of varying fitness classifications for the same bill by different evaluators, and requires a lot of time. To address these problems, this study proposes a fuzzy system-based method that can reduce the processing time needed for fitness classification, and can determine the fitness of banknotes through an objective, systematic method rather than subjective judgment. Our algorithm was an implementation to actual banknote counting machine. Based on the results of tests on 3856 banknotes in United States currency (USD), 3956 in Korean currency (KRW), and 2300 banknotes in Indian currency (INR) using visible light reflection (VR) and near-infrared light transmission (NIRT) imaging, the proposed method was found to yield higher accuracy than prevalent banknote fitness classification methods. Moreover, it was confirmed that the proposed algorithm can operate in real time, not only in a normal PC environment, but also in an embedded system environment of a banknote counting machine. PMID:27294940

Global classification and coding of hypersensitivity diseases - An EAACI - WAO survey, strategic paper and review.

PubMed

Demoly, P; Tanno, L K; Akdis, C A; Lau, S; Calderon, M A; Santos, A F; Sanchez-Borges, M; Rosenwasser, L J; Pawankar, R; Papadopoulos, N G

2014-05-01

Hypersensitivity diseases are not adequately coded in the International Coding of Diseases (ICD)-10 resulting in misclassification, leading to low visibility of these conditions and general accuracy of official statistics. To call attention to the inadequacy of the ICD-10 in relation to allergic and hypersensitivity diseases and to contribute to improvements to be made in the forthcoming revision of ICD, a web-based global survey of healthcare professionals' attitudes toward allergic disorders classification was proposed to the members of European Academy of Allergy and Clinical Immunology (EAACI) (individuals) and World Allergy Organization (WAO) (representative responding on behalf of the national society), launched via internet and circulated for 6 week. As a result, we had 612 members of 144 countries from all six World Health Organization (WHO) global regions who answered the survey. ICD-10 is the most used classification worldwide, but it was not considered appropriate in clinical practice by the majority of participants. The majority indicated the EAACI-WAO classification as being easier and more accurate in the daily practice. They saw the need for a diagnostic system useful for nonallergists and endorsed the possibility of a global, cross-culturally applicable classification system of allergic disorders. This first and most broadly international survey ever conducted of health professionals' attitudes toward allergic disorders classification supports the need to update the current classifications of allergic diseases and can be useful to the WHO in improving the clinical utility of the classification and its global acceptability for the revised ICD-11. © 2014 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Mapping forest types in Worcester County, Maryland, using LANDSAT data

NASA Technical Reports Server (NTRS)

Burtis, J., Jr.; Witt, R. G.

1981-01-01

The feasibility of mapping Level 2 forest cover types for a county-sized area on Maryland's Eastern Shore was demonstrated. A Level 1 land use/land cover classification was carried out for all of Worcester County as well. A June 1978 LANDSAT scene was utilized in a classification which employed two software packages on different computers (IDIMS on an HP 3000 and ASTEP-II on a Univac 1108). A twelve category classification scheme was devised for the study area. Resulting products include black and white line printer maps, final color coded classification maps, digitally enhanced color imagery and tabulated acreage statistics for all land use and land cover types.

The Influence of Tactile Perception on Classification of Bone Tissue at Dental Implant Insertion.

PubMed

Linck, Gláucia Kelly Silva Barbosa; Ferreira, Geovane Miranda; De Oliveira, Rubelisa Cândido Gomes; Lindh, Christina; Leles, Cláudio Rodrigues; Ribeiro-Rotta, Rejane Faria

2016-06-01

Various ways of using the Lekholm and Zarb (L&Z) classification have added to the lack of scientific evidence of the effectiveness of this clinical method in the evaluation of implant treatment. The study aims to assess subjective jawbone classifications in patients referred for implant treatment, using L&Z classification with and without surgeon's hand perception at implant insertion. The association between bone type classifications and quantitative parameters of primary implant stability was also assessed. One hundred thirty-five implants were inserted using conventional loading protocol. Three surgeons classified bone quality at implant sites using two methods: one based on periapical and panoramic images (modified L&Z) and one based on the same images associated with the surgeon's tactile perception during drilling (original L&Z). Peak insertion torque and implant stability quotient (ISQ) were recorded. The modified and original L&Z were strongly correlated (rho = 0.79; p < .001); Wilcoxon signed-rank test showed no significant difference in the distribution of bone type classification between pairs using the two methods (p = .538). Spearman correlation tested the association between primary stability parameters and bone type classifications (-0.34 to -0.57 [p < .001]). Tactile surgical perception has a minor influence on rating of subjective bone type for dental implant treatment using the L&Z classification. © 2015 Wiley Periodicals, Inc.

Experimental Investigation of Natural-Circulation Flow Behavior Under Low-Power/Low-Pressure Conditions in the Large-Scale PANDA Facility

DOE Office of Scientific and Technical Information (OSTI.GOV)

Auban, Olivier; Paladino, Domenico; Zboray, Robert

2004-12-15

Twenty-five tests have been carried out in the large-scale thermal-hydraulic facility PANDA to investigate natural-circulation and stability behavior under low-pressure/low-power conditions, when void flashing might play an important role. This work, which extends the current experimental database to a large geometric scale, is of interest notably with regard to the start-up procedures in natural-circulation-cooled boiling water reactors. It should help the understanding of the physical phenomena that may cause flow instability in such conditions and can be used for validation of thermal-hydraulics system codes. The tests were performed at a constant power, balanced by a specific condenser heat removal capacity.more » The test matrix allowed the reactor pressure vessel power and pressure to be varied, as well as other parameters influencing the natural-circulation flow. The power spectra of flow oscillations showed in a few tests a major and unique resonance peak, and decay ratios between 0.5 and 0.9 have been found. The remainder of the tests showed an even more pronounced stable behavior. A classification of the tests is presented according to the circulation modes (from single-phase to two-phase flow) that could be assumed and particularly to the importance and the localization of the flashing phenomenon.« less

Variety of RNAs in Peripheral Blood Cells, Plasma, and Plasma Fractions

PubMed Central

Kuligina, Elena V.; Bariakin, Dmitry N.; Kozlov, Vadim V.; Richter, Vladimir A.; Semenov, Dmitry V.

2017-01-01

Human peripheral blood contains RNA in cells and in extracellular membrane vesicles, microvesicles and exosomes, as well as in cell-free ribonucleoproteins. Circulating mRNAs and noncoding RNAs, being internalized, possess the ability to modulate vital processes in recipient cells. In this study, with SOLiD sequencing technology, we performed identification, classification, and quantification of RNAs from blood fractions: cells, plasma, plasma vesicles pelleted at 16,000g and 160,000g, and vesicle-depleted plasma supernatant of healthy donors and non-small cell lung cancer (NSCLC) patients. It was determined that 16,000g blood plasma vesicles were enriched with cell-free mitochondria and with a set of mitochondrial RNAs. The variable RNA set of blood plasma 160,000g pellets reflected the prominent contribution of U1, U5, and U6 small nuclear RNAs' fragments and at the same time was characterized by a remarkable depletion of small nucleolar RNAs. Besides microRNAs, the variety of fragments of mRNAs and snoRNAs dominated in the set of circulating RNAs differentially expressed in blood fractions of NSCLC patients. Taken together, our data emphasize that not only extracellular microRNAs but also circulating fragments of messenger and small nuclear/nucleolar RNAs represent prominent classes of circulating regulatory ncRNAs as well as promising circulating biomarkers for the development of disease diagnostic approaches. PMID:28127559

Label-free counting of circulating cells by in vivo photoacoustic flow cytometry

NASA Astrophysics Data System (ADS)

Zhou, Quanyu; Yang, Ping; Wang, Qiyan; Pang, Kai; Zhou, Hui; He, Hao; Wei, Xunbin

2018-02-01

Melanoma, developing from melanocytes, is the most serious type of skin cancer. Circulating melanoma cells, the prognosis marker for metastasis, are present in the circulation at the early stage. Thus, quantitative detection of rare circulating melanoma cells is essential for monitoring tumor metastasis and prognosis evaluation. Compared with in vitro assays, in vivo flow cytometry is able to identify circulating tumor cells without drawing blood. Here, we built in vivo photoacoustic flow cytometry based on the high absorption coefficient of melanoma cells, which is applied to labelfree counting of circulating melanoma cells in tumor-bearing mice.

7 CFR 51.2836 - Size classifications.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 2 2013-01-01 2013-01-01 false Size classifications. 51.2836 Section 51.2836...-Granex-Grano and Creole Types) Size Classifications § 51.2836 Size classifications. The size of onions may be specified in accordance with one of the following classifications. Size designation Minimum...

7 CFR 51.2836 - Size classifications.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 2 2014-01-01 2014-01-01 false Size classifications. 51.2836 Section 51.2836...-Granex-Grano and Creole Types) Size Classifications § 51.2836 Size classifications. The size of onions may be specified in accordance with one of the following classifications. Size designation Minimum...

Serum Progranulin Concentrations May Be Associated With Macrophage Infiltration Into Omental Adipose Tissue

PubMed Central

Youn, Byung-Soo; Bang, Sa-Ik; Klöting, Nora; Park, Ji Woo; Lee, Namseok; Oh, Ji-Eun; Pi, Kyung-Bae; Lee, Tae Hee; Ruschke, Karen; Fasshauer, Mathias; Stumvoll, Michael; Blüher, Matthias

2009-01-01

OBJECTIVE—Progranulin is an important molecule in inflammatory response. Chronic inflammation is frequently associated with central obesity and associated disturbances; however, the role of circulating progranulin in human obesity, type 2 diabetes, and dyslipidemia is unknown. RESEARCH DESIGN AND METHODS—For the measurement of progranulin serum concentrations, we developed an enzyme-linked immunosorbent assay (ELISA). Using this ELISA, we assessed circulating progranulin in a cross-sectional study of 209 subjects with a wide range of obesity, body fat distribution, insulin sensitivity, and glucose tolerance and in 60 individuals with normal (NGT) or impaired (IGT) glucose tolerance or type 2 diabetes before and after a 4-week physical training program. Progranulin mRNA and protein expression was measured in paired samples of omental and subcutaneous adipose tissue (adipocytes and cells of the stromal vascular fraction) from 55 lean or obese individuals. Measurement of Erk activation and chemotactic activity induced by progranulin in vitro was performed using THP-1–based cell migration assays. RESULTS—Progranulin serum concentrations were significantly higher in individuals with type 2 diabetes compared with NGT and in obese subjects with predominant visceral fat accumulation. Circulating progranulin significantly correlates with BMI, macrophage infiltration in omental adipose tissue, C-reactive protein (CRP) serum concentrations, A1C values, and total cholesterol. Multivariable linear regression analyses revealed CRP levels as the strongest independent predictor of circulating progranulin. The extent of in vitro progranulin-mediated chemotaxis is similar to that of monocyte chemoattractant protein-1 but independent of Gα. Moreover, in type 2 diabetes, but not in IGT and NGT individuals, physical training for 4 weeks resulted in significantly decreased circulating progranulin levels. CONCLUSIONS—Elevated progranulin serum concentrations are associated with visceral obesity, elevated plasma glucose, and dyslipidemia. We identified progranulin as a novel marker of chronic inflammation in obesity and type 2 diabetes that closely reflects omental adipose tissue macrophage infiltration. Physical training significantly reduces elevated circulating progranulin in patients with type 2 diabetes. PMID:19056610

Molecular epidemiological analysis of env and pol sequences in newly diagnosed HIV type 1-infected, untreated patients in Hungary.

PubMed

Mezei, Mária; Ay, Eva; Koroknai, Anita; Tóth, Renáta; Balázs, Andrea; Bakos, Agnes; Gyori, Zoltán; Bánáti, Ferenc; Marschalkó, Márta; Kárpáti, Sarolta; Minárovits, János

2011-11-01

The aim of our study was to monitor the diversity of HIV-1 strains circulating in Hungary and investigate the prevalence of resistance-associated mutations to reverse transcriptase (RT) and protease (PR) inhibitors in newly diagnosed, drug-naive patients. A total of 30 HIV-1-infected patients without prior antiretroviral treatment diagnosed during the period 2008-2010 were included into this study. Viral subtypes and the presence of RT, PR resistance-associated mutations were established by sequencing. Classification of HIV-1 strains showed that 29 (96.6%) patients were infected with subtype B viruses and one patient (3.3%) with subtype A virus. The prevalence of HIV-1 strains with transmitted drug resistance mutations in newly diagnosed individuals was 16.6% (5/30). This study showed that HIV-1 subtype B is still highly predominant in Hungary and documented a relatively high transmission rate of drug resistance in our country.

Hemocitical responses to environmental stress in invertebrates: a review.

PubMed

Perez, Danielli Giuliano; Fontanetti, Carmem Silvia

2011-06-01

Although invertebrates are recognized by the great facility to accumulate pollutants present in their environment and many of them are used as sentinel species in biomonitoring studies, little is known about the impact of toxicants on the immune system of these animals. In this regard, hemocytes play a fundamental role: these cells circulate freely through the hemolymph of invertebrates and act on the recognition of foreign material to the organism, mediating and effecting the cellular defense, such as phagocytosis, nodulation, and encapsulation. Different morphological types can be recognized but still there is controversy among the researchers about the exact classification of the hemocytes due to the diversity of techniques for the preservation and observation of these cells. In the present study, a review on the main hemocyte responses to environmental stress in different invertebrate organisms is presented, emphasizing the contamination by heavy metals. It is discussed parameters such as: alteration in the number of cells involved in the defense reaction, phagocytic activity, lysosomal responses, and production of reactive oxygen species.

Global digital data sets of soil type, soil texture, surface slope and other properties: Documentation of archived data tape

NASA Technical Reports Server (NTRS)

Staub, B.; Rosenzweig, C.; Rind, D.

1987-01-01

The file structure and coding of four soils data sets derived from the Zobler (1986) world soil file is described. The data were digitized on a one-degree square grid. They are suitable for large-area studies such as climate research with general circulation models, as well as in forestry, agriculture, soils, and hydrology. The first file is a data set of codes for soil unit, land-ice, or water, for all the one-degree square cells on Earth. The second file is a data set of codes for texture, land-ice, or water, for the same soil units. The third file is a data set of codes for slope, land-ice, or water for the same units. The fourth file is the SOILWRLD data set, containing information on soil properties of land cells of both Matthews' and Food and Agriculture Organization (FAO) sources. The fourth file reconciles land-classification differences between the two and has missing data filled in.

Diagnostic discrepancies in retinopathy of prematurity classification

PubMed Central

Campbell, J. Peter; Ryan, Michael C.; Lore, Emily; Tian, Peng; Ostmo, Susan; Jonas, Karyn; Chan, R.V. Paul; Chiang, Michael F.

2016-01-01

Objective To identify the most common areas for discrepancy in retinopathy of prematurity (ROP) classification between experts. Design Prospective cohort study. Subjects, Participants, and/or Controls 281 infants were identified as part of a multi-center, prospective, ROP cohort study from 7 participating centers. Each site had participating ophthalmologists who provided the clinical classification after routine examination using binocular indirect ophthalmoscopy (BIO), and obtained wide-angle retinal images, which were independently classified by two study experts. Methods Wide-angle retinal images (RetCam; Clarity Medical Systems, Pleasanton, CA) were obtained from study subjects, and two experts evaluated each image using a secure web-based module. Image-based classifications for zone, stage, plus disease, overall disease category (no ROP, mild ROP, Type II or pre-plus, and Type I) were compared between the two experts, and to the clinical classification obtained by BIO. Main Outcome Measures Inter-expert image-based agreement and image-based vs. ophthalmoscopic diagnostic agreement using absolute agreement and weighted kappa statistic. Results 1553 study eye examinations from 281 infants were included in the study. Experts disagreed on the stage classification in 620/1553 (40%) of comparisons, plus disease classification (including pre-plus) in 287/1553 (18%), zone in 117/1553 (8%), and overall ROP category in 618/1553 (40%). However, agreement for presence vs. absence of type 1 disease was >95%. There were no differences between image-based and clinical classification except for zone III disease. Conclusions The most common area of discrepancy in ROP classification is stage, although inter-expert agreement for clinically-significant disease such as presence vs. absence of type 1 and type 2 disease is high. There were no differences between image-based grading and the clinical exam in the ability to detect clinically-significant disease. This study provides additional evidence that image-based classification of ROP reliably detects clinically significant levels of ROP with high accuracy compared to the clinical exam. PMID:27238376

Analysis of the relationship between the monthly temperatures and weather types in Iberian Peninsula

NASA Astrophysics Data System (ADS)

Peña Angulo, Dhais; Trigo, Ricardo; Nicola, Cortesi; José Carlos, González-Hidalgo

2016-04-01

In this study, the relationship between the atmospheric circulation and weather types and the monthly average maximum and minimum temperatures in the Iberian Peninsula is modeled (period 1950-2010). The temperature data used were obtained from a high spatial resolution (10km x 10km) dataset (MOTEDAS dataset, Gonzalez-Hidalgo et al., 2015a). In addition, a dataset of Portuguese temperatures was used (obtained from the Portuguese Institute of Sea and Atmosphere). The weather type classification used was the one developed by Jenkinson and Collison, which was adapted for the Iberian Peninsula by Trigo and DaCamara (2000), using Sea Level Pressure data from NCAR/NCEP Reanalysis dataset (period 1951-2010). The analysis of the behaviour of monthly temperatures based on the weather types was carried out using a stepwise regression procedure of type forward to estimate temperatures in each cell of the considered grid, for each month, and for both maximum and minimum monthly average temperatures. The model selects the weather types that best estimate the temperatures. From the validation model it was obtained the error distribution in the time (months) and space (Iberian Peninsula). The results show that best estimations are obtained for minimum temperatures, during the winter months and in coastal areas. González-Hidalgo J.C., Peña-Angulo D., Brunetti M., Cortesi, C. (2015a): MOTEDAS: a new monthly temperature database for mainland Spain and the trend in temperature (1951-2010). International Journal of Climatology 31, 715-731. DOI: 10.1002/joc.4298

Forest habitat types of central Idaho

Treesearch

Robert Steele; Robert D. Pfister; Russell A. Ryker; Jay A. Kittams

1981-01-01

A land-classification system based upon potential natural vegetation is presented for the forests of central Idaho. It is based on reconnaissance sampling of about 800 stands. A hierarchical taxonomic classification of forest sites was developed using the habitat type concept. A total of eight climax series, 64 habitat types, and 55 additional phases of habitat types...

The new intra-articular calcaneal fracture classification system in term of sustentacular fragment configurations and incorporation of posterior calcaneal facet fractures with fracture components of the calcaneal body.

PubMed

Harnroongroj, Thossart; Harnroongroj, Thos; Suntharapa, Thongchai; Arunakul, Marut

2016-10-01

The aim of this study was to develop a new calcaneal fracture classification system which will consider sustentacular fragment configuration and relation of posterior calcaneal facet to calcaneal body. The new classification system used sustentacular fragment configuration and relation of posterior calcaneal facet fracture with fracture components of calcaneal body as key aspects of main types and subtypes. Between 2000 and 2014, 126 intraarticular calcaneal fractures were classified according to the new classification system by using computed tomography images. The new classification system was studied in term of reliability, correlation to choices of treatment, implant fixation and quality of fracture reduction. Types of sustentacular fragment comprised type A, B and C. Type A sustentacular fragment included sustentacular tali containing middle calcaneal facet. In Type B and C fractures sustentacular fragment included medial aspect and entire posterior calcaneal facet as a single unit, respectively. The fractures with type A, B and C sustentacular fragments were classified as main type A, B and C intra-articular calcaneal fractures. The main type A and B comprised 4 subtypes. Subtypes A1, A3, B1, and B3 associated with avulsion and bending fragments of calcaneal body. Subtype A2, B2, and B4 associated with burst calcaneal body. Subtype B4 was not found in the study. Main type C had no subtype and associated with burst calcaneal body. The data showed good reliability. The study showed that our new intra-articular calcaneal fracture classification system correlates to choices of treatment, implant fixation and quality of fracture reduction. Level IV, Study of Diagnostic Test. Copyright © 2016 Turkish Association of Orthopaedics and Traumatology. Production and hosting by Elsevier B.V. All rights reserved.

Validating the Danish adaptation of the World Health Organization's International Classification for Patient Safety classification of patient safety incident types

PubMed Central

Mikkelsen, Kim Lyngby; Thommesen, Jacob; Andersen, Henning Boje

2013-01-01

Objectives Validation of a Danish patient safety incident classification adapted from the World Health Organizaton's International Classification for Patient Safety (ICPS-WHO). Design Thirty-three hospital safety management experts classified 58 safety incident cases selected to represent all types and subtypes of the Danish adaptation of the ICPS (ICPS-DK). Outcome Measures Two measures of inter-rater agreement: kappa and intra-class correlation (ICC). Results An average number of incident types used per case per rater was 2.5. The mean ICC was 0.521 (range: 0.199–0.809) and the mean kappa was 0.513 (range: 0.193–0.804). Kappa and ICC showed high correlation (r = 0.99). An inverse correlation was found between the prevalence of type and inter-rater reliability. Results are discussed according to four factors known to determine the inter-rater agreement: skill and motivation of raters; clarity of case descriptions; clarity of the operational definitions of the types and the instructions guiding the coding process; adequacy of the underlying classification scheme. Conclusions The incident types of the ICPS-DK are adequate, exhaustive and well suited for classifying and structuring incident reports. With a mean kappa a little above 0.5 the inter-rater agreement of the classification system is considered ‘fair’ to ‘good’. The wide variation in the inter-rater reliability and low reliability and poor discrimination among the highly prevalent incident types suggest that for these types, precisely defined incident sub-types may be preferred. This evaluation of the reliability and usability of WHO's ICPS should be useful for healthcare administrations that consider or are in the process of adapting the ICPS. PMID:23287641

Photometric brown-dwarf classification. I. A method to identify and accurately classify large samples of brown dwarfs without spectroscopy

NASA Astrophysics Data System (ADS)

Skrzypek, N.; Warren, S. J.; Faherty, J. K.; Mortlock, D. J.; Burgasser, A. J.; Hewett, P. C.

2015-02-01

Aims: We present a method, named photo-type, to identify and accurately classify L and T dwarfs onto the standard spectral classification system using photometry alone. This enables the creation of large and deep homogeneous samples of these objects efficiently, without the need for spectroscopy. Methods: We created a catalogue of point sources with photometry in 8 bands, ranging from 0.75 to 4.6 μm, selected from an area of 3344 deg2, by combining SDSS, UKIDSS LAS, and WISE data. Sources with 13.0 0.8, were then classified by comparison against template colours of quasars, stars, and brown dwarfs. The L and T templates, spectral types L0 to T8, were created by identifying previously known sources with spectroscopic classifications, and fitting polynomial relations between colour and spectral type. Results: Of the 192 known L and T dwarfs with reliable photometry in the surveyed area and magnitude range, 189 are recovered by our selection and classification method. We have quantified the accuracy of the classification method both externally, with spectroscopy, and internally, by creating synthetic catalogues and accounting for the uncertainties. We find that, brighter than J = 17.5, photo-type classifications are accurate to one spectral sub-type, and are therefore competitive with spectroscopic classifications. The resultant catalogue of 1157 L and T dwarfs will be presented in a companion paper.

Large-scale classification of traffic signs under real-world conditions

NASA Astrophysics Data System (ADS)

Hazelhoff, Lykele; Creusen, Ivo; van de Wouw, Dennis; de With, Peter H. N.

2012-02-01

Traffic sign inventories are important to governmental agencies as they facilitate evaluation of traffic sign locations and are beneficial for road and sign maintenance. These inventories can be created (semi-)automatically based on street-level panoramic images. In these images, object detection is employed to detect the signs in each image, followed by a classification stage to retrieve the specific sign type. Classification of traffic signs is a complicated matter, since sign types are very similar with only minor differences within the sign, a high number of different signs is involved and multiple distortions occur, including variations in capturing conditions, occlusions, viewpoints and sign deformations. Therefore, we propose a method for robust classification of traffic signs, based on the Bag of Words approach for generic object classification. We extend the approach with a flexible, modular codebook to model the specific features of each sign type independently, in order to emphasize at the inter-sign differences instead of the parts common for all sign types. Additionally, this allows us to model and label the present false detections. Furthermore, analysis of the classification output provides the unreliable results. This classification system has been extensively tested for three different sign classes, covering 60 different sign types in total. These three data sets contain the sign detection results on street-level panoramic images, extracted from a country-wide database. The introduction of the modular codebook shows a significant improvement for all three sets, where the system is able to classify about 98% of the reliable results correctly.

A graduated food addiction classification approach significantly differentiates obesity among people with type 2 diabetes.

PubMed

Raymond, Karren-Lee; Kannis-Dymand, Lee; Lovell, Geoff P

2016-10-01

This study examined a graduated severity level approach to food addiction classification against associations with World Health Organization obesity classifications (body mass index, kg/m 2 ) among 408 people with type 2 diabetes. A survey including the Yale Food Addiction Scale and several demographic questions demonstrated four distinct Yale Food Addiction Scale symptom severity groups (in line with Diagnostic and Statistical Manual of Mental Disorders (5th ed.) severity indicators): non-food addiction, mild food addiction, moderate food addiction and severe food addiction. Analysis of variance with post hoc tests demonstrated each severity classification group was significantly different in body mass index, with each grouping being associated with increased World Health Organization obesity classifications. These findings have implications for diagnosing food addiction and implementing treatment and prevention methodologies of obesity among people with type 2 diabetes.

Three forms of immune myasthenia.

PubMed

Agius, Mark A; Richman, David P; Fairclough, Robert H; Aarli, Johan; Gilhus, Nils Erik; Romi, Fredrik

2003-09-01

We propose a new classification for immune myasthenia based on antibody pattern. The types of immune myasthenia presently characterized by known antibody targets segregate into three groups: type 1, in which the muscle target is the acetylcholine receptor only; type 2, in which titin antibodies are present in addition to acetylcholine receptor antibodies; and type 3, in which muscle-specific kinase antibodies are present in the absence of acetylcholine receptor antibodies. The immune target is unknown in the patients with immune myasthenia not associated with these antibodies. This classification has advantages over the present classifications as regards homogeneity of groups, etiology, mechanism of disease, and prognosis.

Influenza Vaccine Effectiveness in the Netherlands from 2003/2004 through 2013/2014: The Importance of Circulating Influenza Virus Types and Subtypes

PubMed Central

Dijkstra, Frederika; van Doorn, Eva; Bijlsma, Maarten J.; Donker, Gé A.; de Lange, Marit M. A.; Cadenau, Laura M.; Hak, Eelko; Meijer, Adam

2017-01-01

Influenza vaccine effectiveness (IVE) varies over different influenza seasons and virus (sub)types/lineages. To assess the association between IVE and circulating influenza virus (sub)types/lineages, we estimated the overall and (sub)type specific IVE in the Netherlands. We conducted a test-negative case control study among subjects with influenza-like illness or acute respiratory tract infection consulting the Sentinel Practices over 11 influenza seasons (2003/2004 through 2013/2014) in the Netherlands. The adjusted IVE was estimated using generalized linear mixed modelling and multiple logistic regression. In seven seasons vaccine strains did not match the circulating viruses. Overall adjusted IVE was 40% (95% CI 18 to 56%) and 20% (95% CI -5 to 38%) when vaccine (partially)matched and mismatched the circulating viruses, respectively. When A(H3N2) was the predominant virus, IVE was 38% (95% CI 14 to 55%). IVE against infection with former seasonal A(H1N1) virus was 83% (95% CI 52 to 94%), and with B virus 67% (95% CI 55 to 76%). In conclusion IVE estimates were particularly low when vaccine mismatched the circulating viruses and A(H3N2) was the predominant influenza virus subtype. Tremendous effort is required to improve vaccine production procedure and to explore the factors that influence the IVE against A(H3N2) virus. PMID:28068386

7 CFR 30.31 - Classification of leaf tobacco.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 2 2013-01-01 2013-01-01 false Classification of leaf tobacco. 30.31 Section 30.31... REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.31 Classification of leaf tobacco. For the purpose of this classification leaf tobacco shall...

7 CFR 30.31 - Classification of leaf tobacco.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 2 2012-01-01 2012-01-01 false Classification of leaf tobacco. 30.31 Section 30.31... REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.31 Classification of leaf tobacco. For the purpose of this classification leaf tobacco shall...

7 CFR 30.31 - Classification of leaf tobacco.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 2 2010-01-01 2010-01-01 false Classification of leaf tobacco. 30.31 Section 30.31... REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.31 Classification of leaf tobacco. For the purpose of this classification leaf tobacco shall...

7 CFR 30.31 - Classification of leaf tobacco.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 2 2011-01-01 2011-01-01 false Classification of leaf tobacco. 30.31 Section 30.31... REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.31 Classification of leaf tobacco. For the purpose of this classification leaf tobacco shall...

7 CFR 30.31 - Classification of leaf tobacco.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 2 2014-01-01 2014-01-01 false Classification of leaf tobacco. 30.31 Section 30.31... REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.31 Classification of leaf tobacco. For the purpose of this classification leaf tobacco shall...

Modified Low Density Lipoprotein and Lipoprotein-Containing Circulating Immune Complexes as Diagnostic and Prognostic Biomarkers of Atherosclerosis and Type 1 Diabetes Macrovascular Disease

PubMed Central

Orekhov, Alexander N.; Bobryshev, Yuri V.; Sobenin, Igor A.; Melnichenko, Alexandra A.; Chistiakov, Dimitry A.

2014-01-01

In atherosclerosis; blood low-density lipoproteins (LDL) are subjected to multiple enzymatic and non-enzymatic modifications that increase their atherogenicity and induce immunogenicity. Modified LDL are capable of inducing vascular inflammation through activation of innate immunity; thus, contributing to the progression of atherogenesis. The immunogenicity of modified LDL results in induction of self-antibodies specific to a certain type of modified LDL. The antibodies react with modified LDL forming circulating immune complexes. Circulating immune complexes exhibit prominent immunomodulatory properties that influence atherosclerotic inflammation. Compared to freely circulating modified LDL; modified LDL associated with the immune complexes have a more robust atherogenic and proinflammatory potential. Various lipid components of the immune complexes may serve not only as diagnostic but also as essential predictive markers of cardiovascular events in atherosclerosis. Accumulating evidence indicates that LDL-containing immune complexes can also serve as biomarker for macrovascular disease in type 1 diabetes. PMID:25050779

Improving crop classification through attention to the timing of airborne radar acquisitions

NASA Technical Reports Server (NTRS)

Brisco, B.; Ulaby, F. T.; Protz, R.

1984-01-01

Radar remote sensors may provide valuable input to crop classification procedures because of (1) their independence of weather conditions and solar illumination, and (2) their ability to respond to differences in crop type. Manual classification of multidate synthetic aperture radar (SAR) imagery resulted in an overall accuracy of 83 percent for corn, forest, grain, and 'other' cover types. Forests and corn fields were identified with accuracies approaching or exceeding 90 percent. Grain fields and 'other' fields were often confused with each other, resulting in classification accuracies of 51 and 66 percent, respectively. The 83 percent correct classification represents a 10 percent improvement when compared to similar SAR data for the same area collected at alternate time periods in 1978. These results demonstrate that improvements in crop classification accuracy can be achieved with SAR data by synchronizing data collection times with crop growth stages in order to maximize differences in the geometric and dielectric properties of the cover types of interest.

Land Covers Classification Based on Random Forest Method Using Features from Full-Waveform LIDAR Data

NASA Astrophysics Data System (ADS)

Ma, L.; Zhou, M.; Li, C.

2017-09-01

In this study, a Random Forest (RF) based land covers classification method is presented to predict the types of land covers in Miyun area. The returned full-waveforms which were acquired by a LiteMapper 5600 airborne LiDAR system were processed, including waveform filtering, waveform decomposition and features extraction. The commonly used features that were distance, intensity, Full Width at Half Maximum (FWHM), skewness and kurtosis were extracted. These waveform features were used as attributes of training data for generating the RF prediction model. The RF prediction model was applied to predict the types of land covers in Miyun area as trees, buildings, farmland and ground. The classification results of these four types of land covers were obtained according to the ground truth information acquired from CCD image data of the same region. The RF classification results were compared with that of SVM method and show better results. The RF classification accuracy reached 89.73% and the classification Kappa was 0.8631.

Profiting from Knowledge Circulation: The Gains from University-Industry Interaction

ERIC Educational Resources Information Center

van der Sijde, P. C.

2012-01-01

In this paper the concept of knowledge circulation is explored and placed in a social systems approach that distinguishes four types of "capital": cultural, strategic, network and economic. Knowledge circulation is a form of university-industry interaction that accommodates the objectives of what are, in many respects, unequal partners and…

Classification and area estimation of land covers in Kansas using ground-gathered and LANDSAT digital data

NASA Technical Reports Server (NTRS)

May, G. A.; Holko, M. L.; Anderson, J. E.

1983-01-01

Ground-gathered data and LANDSAT multispectral scanner (MSS) digital data from 1981 were analyzed to produce a classification of Kansas land areas into specific types called land covers. The land covers included rangeland, forest, residential, commercial/industrial, and various types of water. The analysis produced two outputs: acreage estimates with measures of precision, and map-type or photo products of the classification which can be overlaid on maps at specific scales. State-level acreage estimates were obtained and substate-level land cover classification overlays and estimates were generated for selected geographical areas. These products were found to be of potential use in managing land and water resources.

A non-parametric, supervised classification of vegetation types on the Kaibab National Forest using decision trees

Treesearch

Suzanne M. Joy; R. M. Reich; Richard T. Reynolds

2003-01-01

Traditional land classification techniques for large areas that use Landsat Thematic Mapper (TM) imagery are typically limited to the fixed spatial resolution of the sensors (30m). However, the study of some ecological processes requires land cover classifications at finer spatial resolutions. We model forest vegetation types on the Kaibab National Forest (KNF) in...

A statistical approach to root system classification

PubMed Central

Bodner, Gernot; Leitner, Daniel; Nakhforoosh, Alireza; Sobotik, Monika; Moder, Karl; Kaul, Hans-Peter

2013-01-01

Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for “plant functional type” identification in ecology can be applied to the classification of root systems. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. The study demonstrates that principal component based rooting types provide efficient and meaningful multi-trait classifiers. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems) is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Rooting types emerging from measured data, mainly distinguished by diameter/weight and density dominated types. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement techniques are essential. PMID:23914200

Comparison Between Supervised and Unsupervised Classifications of Neuronal Cell Types: A Case Study

PubMed Central

Guerra, Luis; McGarry, Laura M; Robles, Víctor; Bielza, Concha; Larrañaga, Pedro; Yuste, Rafael

2011-01-01

In the study of neural circuits, it becomes essential to discern the different neuronal cell types that build the circuit. Traditionally, neuronal cell types have been classified using qualitative descriptors. More recently, several attempts have been made to classify neurons quantitatively, using unsupervised clustering methods. While useful, these algorithms do not take advantage of previous information known to the investigator, which could improve the classification task. For neocortical GABAergic interneurons, the problem to discern among different cell types is particularly difficult and better methods are needed to perform objective classifications. Here we explore the use of supervised classification algorithms to classify neurons based on their morphological features, using a database of 128 pyramidal cells and 199 interneurons from mouse neocortex. To evaluate the performance of different algorithms we used, as a “benchmark,” the test to automatically distinguish between pyramidal cells and interneurons, defining “ground truth” by the presence or absence of an apical dendrite. We compared hierarchical clustering with a battery of different supervised classification algorithms, finding that supervised classifications outperformed hierarchical clustering. In addition, the selection of subsets of distinguishing features enhanced the classification accuracy for both sets of algorithms. The analysis of selected variables indicates that dendritic features were most useful to distinguish pyramidal cells from interneurons when compared with somatic and axonal morphological variables. We conclude that supervised classification algorithms are better matched to the general problem of distinguishing neuronal cell types when some information on these cell groups, in our case being pyramidal or interneuron, is known a priori. As a spin-off of this methodological study, we provide several methods to automatically distinguish neocortical pyramidal cells from interneurons, based on their morphologies. © 2010 Wiley Periodicals, Inc. Develop Neurobiol 71: 71–82, 2011 PMID:21154911

Acromioclavicular joint dislocations: radiological correlation between Rockwood classification system and injury patterns in human cadaver species.

PubMed

Eschler, Anica; Rösler, Klaus; Rotter, Robert; Gradl, Georg; Mittlmeier, Thomas; Gierer, Philip

2014-09-01

The classification system of Rockwood and Young is a commonly used classification for acromioclavicular joint separations subdividing types I-VI. This classification hypothesizes specific lesions to anatomical structures (acromioclavicular and coracoclavicular ligaments, capsule, attached muscles) leading to the injury. In recent literature, our understanding for anatomical correlates leading to the radiological-based Rockwood classification is questioned. The goal of this experimental-based investigation was to approve the correlation between the anatomical injury pattern and the Rockwood classification. In four human cadavers (seven shoulders), the acromioclavicular and coracoclavicular ligaments were transected stepwise. Radiological correlates were recorded (Zanca view) with 15-kg longitudinal tension applied at the wrist. The resulting acromio- and coracoclavicular distances were measured. Radiographs after acromioclavicular ligament transection showed joint space enlargement (8.6 ± 0.3 vs. 3.1 ± 0.5 mm, p < 0.05) and no significant change in coracoclavicular distance (10.4 ± 0.9 vs. 10.0 ± 0.8 mm). According to the Rockwood classification only type I and II lesions occurred. After additional coracoclavicular ligament cut, the acromioclavicular joint space width increased to 16.7 ± 2.7 vs. 8.6 ± 0.3 mm, p < 0.05. The mean coracoclavicular distance increased to 20.6 ± 2.1 mm resulting in type III-V lesions concerning the Rockwood classification. Trauma with intact coracoclavicular ligaments did not result in acromioclavicular joint lesions higher than Rockwood type I and II. The clinical consequence for reconstruction of low-grade injuries might be a solely surgical approach for the acromioclavicular ligaments or conservative treatment. High-grade injuries were always based on additional structural damage to the coracoclavicular ligaments. Rockwood type V lesions occurred while muscle attachments were intact.

Forest habitat types of eastern Idaho-western Wyoming

Treesearch

Robert Steele; Stephen V. Cooper; David M. Ondov; David W. Roberts; Robert D. Pfister

1983-01-01

A land-classification system based upon potential natural vegetation is presented for the forests of central Idaho. It is based on reconnaissance sampling of about 980 stands. A hierarchical taxonomic classification of forest sites was developed using the habitat type concept. A total of six climax series, 58 habitat types, and 24 additional phases of habitat types are...

Nationwide classification of forest types of India using remote sensing and GIS.

PubMed

Reddy, C Sudhakar; Jha, C S; Diwakar, P G; Dadhwal, V K

2015-12-01

India, a mega-diverse country, possesses a wide range of climate and vegetation types along with a varied topography. The present study has classified forest types of India based on multi-season IRS Resourcesat-2 Advanced Wide Field Sensor (AWiFS) data. The study has characterized 29 land use/land cover classes including 14 forest types and seven scrub types. Hybrid classification approach has been used for the classification of forest types. The classification of vegetation has been carried out based on the ecological rule bases followed by Champion and Seth's (1968) scheme of forest types in India. The present classification scheme has been compared with the available global and national level land cover products. The natural vegetation cover was estimated to be 29.36% of total geographical area of India. The predominant forest types of India are tropical dry deciduous and tropical moist deciduous. Of the total forest cover, tropical dry deciduous forests occupy an area of 2,17,713 km(2) (34.80%) followed by 2,07,649 km(2) (33.19%) under tropical moist deciduous forests, 48,295 km(2) (7.72%) under tropical semi-evergreen forests and 47,192 km(2) (7.54%) under tropical wet evergreen forests. The study has brought out a comprehensive vegetation cover and forest type maps based on inputs critical in defining the various categories of vegetation and forest types. This spatially explicit database will be highly useful for the studies related to changes in various forest types, carbon stocks, climate-vegetation modeling and biogeochemical cycles.

Gender classification under extended operating conditions

NASA Astrophysics Data System (ADS)

Rude, Howard N.; Rizki, Mateen

2014-06-01

Gender classification is a critical component of a robust image security system. Many techniques exist to perform gender classification using facial features. In contrast, this paper explores gender classification using body features extracted from clothed subjects. Several of the most effective types of features for gender classification identified in literature were implemented and applied to the newly developed Seasonal Weather And Gender (SWAG) dataset. SWAG contains video clips of approximately 2000 samples of human subjects captured over a period of several months. The subjects are wearing casual business attire and outer garments appropriate for the specific weather conditions observed in the Midwest. The results from a series of experiments are presented that compare the classification accuracy of systems that incorporate various types and combinations of features applied to multiple looks at subjects at different image resolutions to determine a baseline performance for gender classification.

Microscale Laminar Vortices for High-Purity Extraction and Release of Circulating Tumor Cells.

PubMed

Hur, Soojung Claire; Che, James; Di Carlo, Dino

2017-01-01

Circulating tumor cells (CTCs) are disseminated tumor cells that reflect the tumors of origin and can provide a liquid biopsy that would potentially enable noninvasive tumor profiling, treatment monitoring, and identification of targeted treatments. Accurate and rapid purification of CTCs holds great potential to improve cancer care but the task remains technically challenging. Microfluidic isolation of CTCs within microscale vortices enables high-throughput and size-based purification of rare CTCs from bodily fluids. Collected cells are highly pure, viable, and easily accessible, allowing seamless integration with various downstream applications. Here, we describe how to fabricate the High-Throughput Vortex Chip (Vortex-HT) and to process diluted whole blood for CTC collection. Lastly, immunostaining and imaging protocols for CTC classification and corresponding CTC image galleries are reported.

Neyman-Pearson classification algorithms and NP receiver operating characteristics

PubMed Central

Tong, Xin; Feng, Yang; Li, Jingyi Jessica

2018-01-01

In many binary classification applications, such as disease diagnosis and spam detection, practitioners commonly face the need to limit type I error (that is, the conditional probability of misclassifying a class 0 observation as class 1) so that it remains below a desired threshold. To address this need, the Neyman-Pearson (NP) classification paradigm is a natural choice; it minimizes type II error (that is, the conditional probability of misclassifying a class 1 observation as class 0) while enforcing an upper bound, α, on the type I error. Despite its century-long history in hypothesis testing, the NP paradigm has not been well recognized and implemented in classification schemes. Common practices that directly limit the empirical type I error to no more than α do not satisfy the type I error control objective because the resulting classifiers are likely to have type I errors much larger than α, and the NP paradigm has not been properly implemented in practice. We develop the first umbrella algorithm that implements the NP paradigm for all scoring-type classification methods, such as logistic regression, support vector machines, and random forests. Powered by this algorithm, we propose a novel graphical tool for NP classification methods: NP receiver operating characteristic (NP-ROC) bands motivated by the popular ROC curves. NP-ROC bands will help choose α in a data-adaptive way and compare different NP classifiers. We demonstrate the use and properties of the NP umbrella algorithm and NP-ROC bands, available in the R package nproc, through simulation and real data studies. PMID:29423442

Neyman-Pearson classification algorithms and NP receiver operating characteristics.

PubMed

Tong, Xin; Feng, Yang; Li, Jingyi Jessica

2018-02-01

In many binary classification applications, such as disease diagnosis and spam detection, practitioners commonly face the need to limit type I error (that is, the conditional probability of misclassifying a class 0 observation as class 1) so that it remains below a desired threshold. To address this need, the Neyman-Pearson (NP) classification paradigm is a natural choice; it minimizes type II error (that is, the conditional probability of misclassifying a class 1 observation as class 0) while enforcing an upper bound, α, on the type I error. Despite its century-long history in hypothesis testing, the NP paradigm has not been well recognized and implemented in classification schemes. Common practices that directly limit the empirical type I error to no more than α do not satisfy the type I error control objective because the resulting classifiers are likely to have type I errors much larger than α, and the NP paradigm has not been properly implemented in practice. We develop the first umbrella algorithm that implements the NP paradigm for all scoring-type classification methods, such as logistic regression, support vector machines, and random forests. Powered by this algorithm, we propose a novel graphical tool for NP classification methods: NP receiver operating characteristic (NP-ROC) bands motivated by the popular ROC curves. NP-ROC bands will help choose α in a data-adaptive way and compare different NP classifiers. We demonstrate the use and properties of the NP umbrella algorithm and NP-ROC bands, available in the R package nproc, through simulation and real data studies.

A new classification and treatment protocol for gynecomastia.

PubMed

Ratnam, B Venkata

2009-01-01

It is not uncommon to encounter patients who have undergone surgery for gynecomastia but who were not fully satisfied with the results. Although various approaches and techniques based on presurgical classification systems aimed at yielding the best possible surgical outcomes have been offered, standardized recommendation that is generally accepted by surgeons is lacking. The author reports on a new classification system and treatment protocol for the surgical treatment of gynecomastia. A system was developed that classifies patients into 3 types based on skin elasticity, presence of an inframammary fold (IMF), and mammary ptosis. Surgical excision of the breast mass was followed by a combination of destruction of the IMF, ultrasound-assisted lipoplasty (UAL) of the chest wall, ultrasound stimulation of the breast skin, and periareolar deepithelialization, depending on the gyneocomastia classification. This classification and the treatment protocol were applied to 30 patients, 13 to 60 years of age, between January 2005 and December 2007. Among these patients, 12 were classified as type 1, 6 as type 2, and 12 as type 3. Follow-up ranged from 3 to 18 months. Complications were common to all types of cases and techniques. They included 2 hematomas, 1 wound dehiscence, 5 cases of residual gynecomastia in those patients who underwent UAL alone, and 3 minor aesthetic problems near areolae. The proposed new classification and treatment protocol were found to help solve problems associated with surgical outcomes for all types of gynecomastia, although the issue of residual gynecomastia in patients undergoing UAL alone requires further study.

Multifocal humeral fractures.

PubMed

Maresca, A; Pascarella, R; Bettuzzi, C; Amendola, L; Politano, R; Fantasia, R; Del Torto, M

2014-02-01

Multifocal humeral fractures are extremely rare. These may affect the neck and the shaft, the shaft alone, or the diaphysis and the distal humerus. There is no classification of these fractures in the literature. From 2004 to 2010, 717 patients with humeral fracture were treated surgically at our department. Thirty-five patients presented with an associated fracture of the proximal and diaphyseal humerus: synthesis was performed with plate and screws in 34 patients, and the remaining patient had an open fracture that was treated with an external fixator. Mean follow-up was 3 years and 3 months. A classification is proposed in which type A fractures are those affecting the proximal and the humeral shaft, type B the diaphysis alone, and type C the diaphysis in association with the distal humerus. Type A fractures are then divided into three subgroups: A-I, undisplaced fracture of the proximal humerus and displaced shaft fracture; A-II: displaced fracture of the proximal and humeral shaft; and A-III: multifragmentary fracture affecting the proximal humerus and extending to the diaphysis. Multifocal humeral fractures are very rare and little described in the literature, both for classification and treatment. The AO classification describes bifocal fracture of the humeral diaphysis, type B and C. The classification suggested in this article mainly concerns fractures involving the proximal and humeral shaft. A simple classification of multifocal fractures is suggested to help the surgeon choose the most suitable type of synthesis for surgical treatment. Copyright © 2013 Elsevier Ltd. All rights reserved.

Vessel Classification in Cosmo-Skymed SAR Data Using Hierarchical Feature Selection

NASA Astrophysics Data System (ADS)

Makedonas, A.; Theoharatos, C.; Tsagaris, V.; Anastasopoulos, V.; Costicoglou, S.

2015-04-01

SAR based ship detection and classification are important elements of maritime monitoring applications. Recently, high-resolution SAR data have opened new possibilities to researchers for achieving improved classification results. In this work, a hierarchical vessel classification procedure is presented based on a robust feature extraction and selection scheme that utilizes scale, shape and texture features in a hierarchical way. Initially, different types of feature extraction algorithms are implemented in order to form the utilized feature pool, able to represent the structure, material, orientation and other vessel type characteristics. A two-stage hierarchical feature selection algorithm is utilized next in order to be able to discriminate effectively civilian vessels into three distinct types, in COSMO-SkyMed SAR images: cargos, small ships and tankers. In our analysis, scale and shape features are utilized in order to discriminate smaller types of vessels present in the available SAR data, or shape specific vessels. Then, the most informative texture and intensity features are incorporated in order to be able to better distinguish the civilian types with high accuracy. A feature selection procedure that utilizes heuristic measures based on features' statistical characteristics, followed by an exhaustive research with feature sets formed by the most qualified features is carried out, in order to discriminate the most appropriate combination of features for the final classification. In our analysis, five COSMO-SkyMed SAR data with 2.2m x 2.2m resolution were used to analyse the detailed characteristics of these types of ships. A total of 111 ships with available AIS data were used in the classification process. The experimental results show that this method has good performance in ship classification, with an overall accuracy reaching 83%. Further investigation of additional features and proper feature selection is currently in progress.

Classification of Children Intelligence with Fuzzy Logic Method

NASA Astrophysics Data System (ADS)

Syahminan; ika Hidayati, Permata

2018-04-01

Intelligence of children s An Important Thing To Know The Parents Early on. Typing Can be done With a Child’s intelligence Grouping Dominant Characteristics Of each Type of Intelligence. To Make it easier for Parents in Determining The type of Children’s intelligence And How to Overcome them, for It Created A Classification System Intelligence Grouping Children By Using Fuzzy logic method For determination Of a Child’s degree of intelligence type. From the analysis We concluded that The presence of Intelligence Classification systems Pendulum Children With Fuzzy Logic Method Of determining The type of The Child’s intelligence Can be Done in a way That is easier And The results More accurate Conclusions Than Manual tests.

Analysis of the full genome of human group C rotaviruses reveals lineage diversification and reassortment.

PubMed

Medici, Maria Cristina; Tummolo, Fabio; Martella, Vito; Arcangeletti, Maria Cristina; De Conto, Flora; Chezzi, Carlo; Fehér, Enikő; Marton, Szilvia; Calderaro, Adriana; Bányai, Krisztián

2016-08-01

Group C rotaviruses (RVC) are enteric pathogens of humans and animals. Whole-genome sequences are available only for few RVCs, leaving gaps in our knowledge about their genetic diversity. We determined the full-length genome sequence of two human RVCs (PR2593/2004 and PR713/2012), detected in Italy from hospital-based surveillance for rotavirus infection in 2004 and 2012. In the 11 RNA genomic segments, the two Italian RVCs segregated within separate intra-genotypic lineages showed variation ranging from 1.9 % (VP6) to 15.9 % (VP3) at the nucleotide level. Comprehensive analysis of human RVC sequences available in the databases allowed us to reveal the existence of at least two major genome configurations, defined as type I and type II. Human RVCs of type I were all associated with the M3 VP3 genotype, including the Italian strain PR2593/2004. Conversely, human RVCs of type II were all associated with the M2 VP3 genotype, including the Italian strain PR713/2012. Reassortant RVC strains between these major genome configurations were identified. Although only a few full-genome sequences of human RVCs, mostly of Asian origin, are available, the analysis of human RVC sequences retrieved from the databases indicates that at least two intra-genotypic RVC lineages circulate in European countries. Gathering more sequence data is necessary to develop a standardized genotype and intra-genotypic lineage classification system useful for epidemiological investigations and avoiding confusion in the literature.

A hybrid approach to software repository retrieval: Blending faceted classification and type signatures

NASA Technical Reports Server (NTRS)

Eichmann, David A.

1992-01-01

We present a user interface for software reuse repository that relies both on the informal semantics of faceted classification and the formal semantics of type signatures for abstract data types. The result is an interface providing both structural and qualitative feedback to a software reuser.

ASIST SIG/CR Classification Workshop 2000: Classification for User Support and Learning.

ERIC Educational Resources Information Center

Soergel, Dagobert

2001-01-01

Reports on papers presented at the 62nd Annual Meeting of ASIST (American Society for Information Science and Technology) for the Special Interest Group in Classification Research (SIG/CR). Topics include types of knowledge; developing user-oriented classifications, including domain analysis; classification in the user interface; and automatic…

Basis of Criminalistic Classification of a Person in Republic Kazakhstan and Republic Mongolia

ERIC Educational Resources Information Center

Abdilov, Kanat S.; Zusbaev, Baurzan T.; Naurysbaev, Erlan A.; Nukiev, Berik A.; Nurkina, Zanar B.; Myrzahanov, Erlan N.; Urazalin, Galym T.

2016-01-01

In this article reviewed problems of the criminalistic classification building of a person. In the work were used legal formal, logical, comparative legal methods. The author describes classification kinds. Reveal the meaning of classification in criminalistic systematics. Shows types of grounds of criminalistic classification of a person.…

New Classification of Focal Cortical Dysplasia: Application to Practical Diagnosis

PubMed Central

Bae, Yoon-Sung; Kang, Hoon-Chul; Kim, Heung Dong; Kim, Se Hoon

2012-01-01

Background and Purpose: Malformation of cortical development (MCD) is a well-known cause of drug-resistant epilepsy and focal cortical dysplasia (FCD) is the most common neuropathological finding in surgical specimens from drug-resistant epilepsy patients. Palmini’s classification proposed in 2004 is now widely used to categorize FCD. Recently, however, Blumcke et al. recommended a new system for classifying FCD in 2011. Methods: We applied the new classification system in practical diagnosis of a sample of 117 patients who underwent neurosurgical operations due to drug-resistant epilepsy at Severance Hospital in Seoul, Korea. Results: Among 117 cases, a total of 16 cases were shifted to other FCD subtypes under the new classification system. Five cases were reclassified to type IIIa and five cases were categorized as dual pathology. The other six cases were changed within the type I category. Conclusions: The most remarkable changes in the new classification system are the advent of dual pathology and FCD type III. Thus, it will be very important for pathologists and clinicians to discriminate between these new categories. More large-scale research needs to be conducted to elucidate the clinical influence of the alterations within the classification of type I disease. Although the new FCD classification system has several advantages compared to the former, the correlation with clinical characteristics is not yet clear. PMID:24649461

Using Landsat MSS data with soils information to identify wetland habitats

NASA Technical Reports Server (NTRS)

Ernst, C. L.; Hoffer, R. M.

1981-01-01

A previous study showed that certain fresh water wetland vegetation types can be spectrally separated when a maximum likelihood classification procedure is applied to Landsat spectral data. However, wetland and upland types which have similar vegetative life forms (e.g., upland hardwoods and hardwood swamps) are often confused because of spectral similarity. Therefore, the current investigation attempts to differentiate similar wetland and upland types by combining Landsat multispectral scanner (MSS) data with soils information. The Pigeon River area in northern Indiana used in the earlier study was also employed in this investigation. A layered classification algorithm which combined soils and spectral data was used to generate a wetland classification. The results of the spectral/soils wetland classification are compared to the previous classification that had been based on spectral data alone. The results indicate wetland habitat mapping can be improved by combining soils and other ancillary data with Landsat spectral data.

Beyond "Classroom" Technology: The Equipment Circulation Program at Rasmuson Library, University of Alaska Fairbanks

ERIC Educational Resources Information Center

Jensen, Karen

2008-01-01

The library at the University of Alaska Fairbanks offers a unique equipment lending program through its Circulation Desk. The program features a wide array of equipment types, generous circulation policies, and unrestricted borrowing, enabling students, staff, and faculty to experiment with the latest in audio, video, and computer technologies,…

Literature review of the epidemiology of influenza B disease in 15 countries in the Asia-Pacific region.

PubMed

Jennings, Lance; Huang, Qiu Sue; Barr, Ian; Lee, Ping-Ing; Kim, Woo Joo; Buchy, Philippe; Sanicas, Melvin; Mungall, Bruce A; Chen, Jing

2018-05-01

Influenza control strategies focus on the use of trivalent influenza vaccines containing two influenza A virus subtypes and one of the two circulating influenza type B lineages (Yamagata or Victoria). Mismatches between the vaccine B lineage and the circulating lineage have been regularly documented in many countries, including those in the Asia-Pacific region. We conducted a literature review with the aim of understanding the relative circulation of influenza B viruses in Asia-Pacific countries. PubMed and Western Pacific Region Index Medicus were searched for relevant articles on influenza type B published since 1990 in English language for 15 Asia-Pacific countries. Gray literature was also accessed. From 4834 articles identified, 121 full-text articles were analyzed. Influenza was reported as an important cause of morbidity in the Asia-Pacific region, affecting all age groups. In all 15 countries, influenza B was identified and associated with between 0% and 92% of laboratory-confirmed influenza cases in any one season/year. Influenza type B appeared to cause more illness in children aged between 1 and 10 years than in other age groups. Epidemiological data for the two circulating influenza type B lineages remain limited in several countries in the Asia-Pacific, although the co-circulation of both lineages was seen in countries where strain surveillance data were available. Mismatches between circulating B lineages and vaccine strains were observed in all countries with available data. The data suggest that a shift from trivalent to quadrivalent seasonal influenza vaccines could provide additional benefits by providing broader protection. © 2017 The Authors. Influenza and Other Respiratory Viruses Published by John Wiley & Sons Ltd.

Classification bias in commercial business lists for retail food stores in the U.S.

PubMed

Han, Euna; Powell, Lisa M; Zenk, Shannon N; Rimkus, Leah; Ohri-Vachaspati, Punam; Chaloupka, Frank J

2012-04-18

Aspects of the food environment such as the availability of different types of food stores have recently emerged as key modifiable factors that may contribute to the increased prevalence of obesity. Given that many of these studies have derived their results based on secondary datasets and the relationship of food stores with individual weight outcomes has been reported to vary by store type, it is important to understand the extent to which often-used secondary data correctly classify food stores. We evaluated the classification bias of food stores in Dun & Bradstreet (D&B) and InfoUSA commercial business lists. We performed a full census in 274 randomly selected census tracts in the Chicago metropolitan area and collected detailed store attributes inside stores for classification. Store attributes were compared by classification match status and store type. Systematic classification bias by census tract characteristics was assessed in multivariate regression. D&B had a higher classification match rate than InfoUSA for supermarkets and grocery stores, while InfoUSA was higher for convenience stores. Both lists were more likely to correctly classify large supermarkets, grocery stores, and convenience stores with more cash registers and different types of service counters (supermarkets and grocery stores only). The likelihood of a correct classification match for supermarkets and grocery stores did not vary systemically by tract characteristics whereas convenience stores were more likely to be misclassified in predominately Black tracts. Researches can rely on classification of food stores in commercial datasets for supermarkets and grocery stores whereas classifications for convenience and specialty food stores are subject to some systematic bias by neighborhood racial/ethnic composition.

Classification bias in commercial business lists for retail food stores in the U.S.

PubMed Central

2012-01-01

Background Aspects of the food environment such as the availability of different types of food stores have recently emerged as key modifiable factors that may contribute to the increased prevalence of obesity. Given that many of these studies have derived their results based on secondary datasets and the relationship of food stores with individual weight outcomes has been reported to vary by store type, it is important to understand the extent to which often-used secondary data correctly classify food stores. We evaluated the classification bias of food stores in Dun & Bradstreet (D&B) and InfoUSA commercial business lists. Methods We performed a full census in 274 randomly selected census tracts in the Chicago metropolitan area and collected detailed store attributes inside stores for classification. Store attributes were compared by classification match status and store type. Systematic classification bias by census tract characteristics was assessed in multivariate regression. Results D&B had a higher classification match rate than InfoUSA for supermarkets and grocery stores, while InfoUSA was higher for convenience stores. Both lists were more likely to correctly classify large supermarkets, grocery stores, and convenience stores with more cash registers and different types of service counters (supermarkets and grocery stores only). The likelihood of a correct classification match for supermarkets and grocery stores did not vary systemically by tract characteristics whereas convenience stores were more likely to be misclassified in predominately Black tracts. Conclusion Researches can rely on classification of food stores in commercial datasets for supermarkets and grocery stores whereas classifications for convenience and specialty food stores are subject to some systematic bias by neighborhood racial/ethnic composition. PMID:22512874

Detection of Poliovirus Circulation by Environmental Surveillance in the Absence of Clinical Cases in Israel and the Palestinian Authority

PubMed Central

Manor, Y.; Handsher, R.; Halmut, T.; Neuman, M.; Bobrov, A.; Rudich, H.; Vonsover, A.; Shulman, L.; Kew, O.; Mendelson, E.

1999-01-01

The global eradication of poliomyelitis, believed to be achievable around the year 2000, relies on strategies which include high routine immunization coverage and mass vaccination campaigns, along with continuous monitoring of wild-type virus circulation by using the laboratory-based acute flaccid paralysis (AFP) surveillance. Israel and the Palestinian Authority are located in a geographical region in which poliovirus is still endemic but have been free of poliomyelitis since 1988 as a result of intensive immunization programs and mass vaccination campaigns. To monitor the wild-type virus circulation, environmental surveillance of sewage samples collected monthly from 25 to 30 sites across the country was implemented in 1989 and AFP surveillance began in 1994. The sewage samples were processed in the laboratory with a double-selective tissue culture system, which enabled economical processing of large number of samples. Between 1989 and 1997, 2,294 samples were processed, and wild-type poliovirus was isolated from 17 of them in four clusters, termed “silent outbreaks,” in September 1990 (type 3), between May and September 1991 (type 1), between October 1994 and June 1995 (type 1), and in December 1996 (type 1). Fifteen of the 17 positive samples were collected in the Gaza Strip, 1 was collected in the West Bank, and 1 was collected in the Israeli city of Ashdod, located close to the Gaza Strip. The AFP surveillance system failed to detect the circulating wild-type viruses. These findings further emphasize the important role that environmental surveillance can play in monitoring the eradication of polioviruses. PMID:10325305

Automated spectral classification and the GAIA project

NASA Technical Reports Server (NTRS)

Lasala, Jerry; Kurtz, Michael J.

1995-01-01

Two dimensional spectral types for each of the stars observed in the global astrometric interferometer for astrophysics (GAIA) mission would provide additional information for the galactic structure and stellar evolution studies, as well as helping in the identification of unusual objects and populations. The classification of the large quantity generated spectra requires that automated techniques are implemented. Approaches for the automatic classification are reviewed, and a metric-distance method is discussed. In tests, the metric-distance method produced spectral types with mean errors comparable to those of human classifiers working at similar resolution. Data and equipment requirements for an automated classification survey, are discussed. A program of auxiliary observations is proposed to yield spectral types and radial velocities for the GAIA-observed stars.

Commission 45: Spectral Classification

NASA Astrophysics Data System (ADS)

Giridhar, Sunetra; Gray, Richard O.; Corbally, Christopher J.; Bailer-Jones, Coryn A. L.; Eyer, Laurent; Irwin, Michael J.; Kirkpatrick, J. Davy; Majewski, Steven; Minniti, Dante; Nordström, Birgitta

This report gives an update of developments (since the last General Assembly at Prague) in the areas that are of relevance to the commission. In addition to numerous papers, a new monograph entitled Stellar Spectral Classification with Richard Gray and Chris Corbally as leading authors will be published by Princeton University Press as part of their Princeton Series in Astrophysics in April 2009. This book is an up-to-date and encyclopedic review of stellar spectral classification across the H-R diagram, including the traditional MK system in the blue-violet, recent extensions into the ultraviolet and infrared, the newly defined L-type and T-type spectral classes, as well as spectral classification of carbon stars, S-type stars, white dwarfs, novae, supernovae and Wolf-Rayet stars.

Role of Extracellular miR-122 in Breast Cancer Metastasis

DTIC Science & Technology

2015-02-01

endothelial, lung fibroblasts, and brain astrocyte niche cells through secreting exosomal miR-122, a miRNA whose level in the circulation predicts metastasis...Our results demonstrate that cancer cells are capable of influencing how niche cells metabolize glucose through exosome secretion of miR-122 and the... exosome , miRNA, glucose metabolism, PKM2, GLUT1, niche adaption 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF ABSTRACT 18. NUMBER OF PAGES

Neuro-classification of multi-type Landsat Thematic Mapper data

NASA Technical Reports Server (NTRS)

Zhuang, Xin; Engel, Bernard A.; Fernandez, R. N.; Johannsen, Chris J.

1991-01-01

Neural networks have been successful in image classification and have shown potential for classifying remotely sensed data. This paper presents classifications of multitype Landsat Thematic Mapper (TM) data using neural networks. The Landsat TM Image for March 23, 1987 with accompanying ground observation data for a study area In Miami County, Indiana, U.S.A. was utilized to assess recognition of crop residues. Principal components and spectral ratio transformations were performed on the TM data. In addition, a layer of the geographic information system (GIS) for the study site was incorporated to generate GIS-enhanced TM data. This paper discusses (1) the performance of neuro-classification on each type of data, (2) how neural networks recognized each type of data as a new image and (3) comparisons of the results for each type of data obtained using neural networks, maximum likelihood, and minimum distance classifiers.

46 CFR 132.210 - Classification.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 4 2011-10-01 2011-10-01 false Classification. 132.210 Section 132.210 Shipping COAST... Portable and Semiportable Fire Extinguishers § 132.210 Classification. (a) Each portable fire extinguisher... Classification Type Size Halon 1211, 1301, and 1211-1301 mixtures kgs. (lbs.) Foam, liters (gallons) Carbon...

46 CFR 132.210 - Classification.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 4 2014-10-01 2014-10-01 false Classification. 132.210 Section 132.210 Shipping COAST... Portable and Semiportable Fire Extinguishers § 132.210 Classification. (a) Each portable fire extinguisher... Classification Type Size Halon 1211, 1301, and 1211-1301 mixtures kgs. (lbs.) Foam, liters (gallons) Carbon...

46 CFR 132.210 - Classification.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 4 2012-10-01 2012-10-01 false Classification. 132.210 Section 132.210 Shipping COAST... Portable and Semiportable Fire Extinguishers § 132.210 Classification. (a) Each portable fire extinguisher... Classification Type Size Halon 1211, 1301, and 1211-1301 mixtures kgs. (lbs.) Foam, liters (gallons) Carbon...

46 CFR 132.210 - Classification.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 4 2013-10-01 2013-10-01 false Classification. 132.210 Section 132.210 Shipping COAST... Portable and Semiportable Fire Extinguishers § 132.210 Classification. (a) Each portable fire extinguisher... Classification Type Size Halon 1211, 1301, and 1211-1301 mixtures kgs. (lbs.) Foam, liters (gallons) Carbon...

75 FR 54419 - Notice: Elimination of Expiration Dates for Classification Approvals

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-07

.... PHMSA-2010-0245; Notice No. 10-6] Notice: Elimination of Expiration Dates for Classification Approvals... 2005, PHMSA initiated a policy imposing a 5-year expiration date on firework classification approvals... include all types of classification approvals, including explosives, oxidizing substances, organic...

46 CFR 132.210 - Classification.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 4 2010-10-01 2010-10-01 false Classification. 132.210 Section 132.210 Shipping COAST... Portable and Semiportable Fire Extinguishers § 132.210 Classification. (a) Each portable fire extinguisher... Classification Type Size Halon 1211, 1301, and 1211-1301 mixtures kgs. (lbs.) Foam, liters (gallons) Carbon...

33 CFR 145.05 - Classification of fire extinguishers.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Classification of fire... SECURITY (CONTINUED) OUTER CONTINENTAL SHELF ACTIVITIES FIRE-FIGHTING EQUIPMENT § 145.05 Classification of....05(c)—Portable and Semiportable Extinguishers Classification Type Size Soda-acid and water, gallons...

Classification and description of world formation types. Part II (Description of formation types)

Treesearch

D. Faber-Langendoen; T. Keeler-Wolf; D. Meidinger; C. Josse; A. Weakley; D. Tart; G. Navarro; B. Hoagland; S. Ponomarenko; J.P. Saucier; G. Fults; E. Helmer

2012-01-01

A vegetation-ecologic classification approach has been developed in which a combination of vegetation attributes (physiognomy, structure, and floristics) and their response to ecological and biogeographic factors are used as the basis for classifying vegetation types (Faber-Langendoen et al. 2012). This approach can help support international, national and subnational...

Texture as a basis for acoustic classification of substrate in the nearshore region

NASA Astrophysics Data System (ADS)

Dennison, A.; Wattrus, N. J.

2016-12-01

Segmentation and classification of substrate type from two locations in Lake Superior, are predicted using multivariate statistical processing of textural measures derived from shallow-water, high-resolution multibeam bathymetric data. During a multibeam sonar survey, both bathymetric and backscatter data are collected. It is well documented that the statistical characteristic of a sonar backscatter mosaic is dependent on substrate type. While classifying the bottom-type on the basis on backscatter alone can accurately predict and map bottom-type, it lacks the ability to resolve and capture fine textural details, an important factor in many habitat mapping studies. Statistical processing can capture the pertinent details about the bottom-type that are rich in textural information. Further multivariate statistical processing can then isolate characteristic features, and provide the basis for an accurate classification scheme. Preliminary results from an analysis of bathymetric data and ground-truth samples collected from the Amnicon River, Superior, Wisconsin, and the Lester River, Duluth, Minnesota, demonstrate the ability to process and develop a novel classification scheme of the bottom type in two geomorphologically distinct areas.

Encoders for block-circulant LDPC codes

NASA Technical Reports Server (NTRS)

Andrews, Kenneth; Dolinar, Sam; Thorpe, Jeremy

2005-01-01

In this paper, we present two encoding methods for block-circulant LDPC codes. The first is an iterative encoding method based on the erasure decoding algorithm, and the computations required are well organized due to the block-circulant structure of the parity check matrix. The second method uses block-circulant generator matrices, and the encoders are very similar to those for recursive convolutional codes. Some encoders of the second type have been implemented in a small Field Programmable Gate Array (FPGA) and operate at 100 Msymbols/second.

[Joint endoprosthesis pathology. Histopathological diagnostics and classification].

PubMed

Krenn, V; Morawietz, L; Jakobs, M; Kienapfel, H; Ascherl, R; Bause, L; Kuhn, H; Matziolis, G; Skutek, M; Gehrke, T

2011-05-01

Prosthesis durability has steadily increased with high 10-year rates of 88-95%. However, four pathogenetic groups of diseases can decrease prosthesis durability: (1) periprosthetic wear particle disease (aseptic loosening) (2) bacterial infection (septic loosening) (3) periprosthetic ossification, and (4) arthrofibrosis. The histopathological "extended consensus classification of periprosthetic membranes" includes four types of membranes, arthrofibrosis, and osseous diseases of endoprosthetics: The four types of neosynovia are: wear particle-induced type (type I), mean prosthesis durability (MPD) in years 12.0; infectious type (type II), MPD 2.5; combined type (type III) MPD 4.2; and indeterminate type (type IV), MPD 5.5. Arthrofibrosis can be determined in three grades: grade 1 needs clinical information to be differentiated from a type IV membrane, and grades 2 & 3 can be diagnosed histopathologically. Periprosthetic ossification, osteopenia-induced fractures, and aseptic osteonecrosis can be histopathologically diagnosed safely with clinical information. The extended consensus classification of periprosthetic membranes may be a diagnostic groundwork for a future national endoprosthesis register.

Review of Carbonate Breccia Genetic Classification in West Hill, Beijing

NASA Astrophysics Data System (ADS)

Yang, Shuran; Danek, Tomas; Cheng, Xianfeng; Huang, Qianrui

2017-12-01

This thesis proposes genetic classification for carbonate breccia in West Hill, Beijing, summarizes the genesis mechanism and features of 14 types of carbonate breccia there, and raises research questions. Not at all of types were included in this classification, mainly which are not so commonly discussed, such as impact breccia formed by meteorolite. Among other things, it raises the issue of overlapping the concept, which requires further research.

Classification of Strawberry Fruit Shape by Machine Learning

NASA Astrophysics Data System (ADS)

Ishikawa, T.; Hayashi, A.; Nagamatsu, S.; Kyutoku, Y.; Dan, I.; Wada, T.; Oku, K.; Saeki, Y.; Uto, T.; Tanabata, T.; Isobe, S.; Kochi, N.

2018-05-01

Shape is one of the most important traits of agricultural products due to its relationships with the quality, quantity, and value of the products. For strawberries, the nine types of fruit shape were defined and classified by humans based on the sampler patterns of the nine types. In this study, we tested the classification of strawberry shapes by machine learning in order to increase the accuracy of the classification, and we introduce the concept of computerization into this field. Four types of descriptors were extracted from the digital images of strawberries: (1) the Measured Values (MVs) including the length of the contour line, the area, the fruit length and width, and the fruit width/length ratio; (2) the Ellipse Similarity Index (ESI); (3) Elliptic Fourier Descriptors (EFDs), and (4) Chain Code Subtraction (CCS). We used these descriptors for the classification test along with the random forest approach, and eight of the nine shape types were classified with combinations of MVs + CCS + EFDs. CCS is a descriptor that adds human knowledge to the chain codes, and it showed higher robustness in classification than the other descriptors. Our results suggest machine learning's high ability to classify fruit shapes accurately. We will attempt to increase the classification accuracy and apply the machine learning methods to other plant species.

A new classification scheme of plastic wastes based upon recycling labels

DOE Office of Scientific and Technical Information (OSTI.GOV)

Özkan, Kemal, E-mail: kozkan@ogu.edu.tr; Ergin, Semih, E-mail: sergin@ogu.edu.tr; Işık, Şahin, E-mail: sahini@ogu.edu.tr

Highlights: • PET, HPDE or PP types of plastics are considered. • An automated classification of plastic bottles based on the feature extraction and classification methods is performed. • The decision mechanism consists of PCA, Kernel PCA, FLDA, SVD and Laplacian Eigenmaps methods. • SVM is selected to achieve the classification task and majority voting technique is used. - Abstract: Since recycling of materials is widely assumed to be environmentally and economically beneficial, reliable sorting and processing of waste packaging materials such as plastics is very important for recycling with high efficiency. An automated system that can quickly categorize thesemore » materials is certainly needed for obtaining maximum classification while maintaining high throughput. In this paper, first of all, the photographs of the plastic bottles have been taken and several preprocessing steps were carried out. The first preprocessing step is to extract the plastic area of a bottle from the background. Then, the morphological image operations are implemented. These operations are edge detection, noise removal, hole removing, image enhancement, and image segmentation. These morphological operations can be generally defined in terms of the combinations of erosion and dilation. The effect of bottle color as well as label are eliminated using these operations. Secondly, the pixel-wise intensity values of the plastic bottle images have been used together with the most popular subspace and statistical feature extraction methods to construct the feature vectors in this study. Only three types of plastics are considered due to higher existence ratio of them than the other plastic types in the world. The decision mechanism consists of five different feature extraction methods including as Principal Component Analysis (PCA), Kernel PCA (KPCA), Fisher’s Linear Discriminant Analysis (FLDA), Singular Value Decomposition (SVD) and Laplacian Eigenmaps (LEMAP) and uses a simple experimental setup with a camera and homogenous backlighting. Due to the giving global solution for a classification problem, Support Vector Machine (SVM) is selected to achieve the classification task and majority voting technique is used as the decision mechanism. This technique equally weights each classification result and assigns the given plastic object to the class that the most classification results agree on. The proposed classification scheme provides high accuracy rate, and also it is able to run in real-time applications. It can automatically classify the plastic bottle types with approximately 90% recognition accuracy. Besides this, the proposed methodology yields approximately 96% classification rate for the separation of PET or non-PET plastic types. It also gives 92% accuracy for the categorization of non-PET plastic types into HPDE or PP.« less

Classification of human coronary atherosclerotic plaques using ex vivo high-resolution multicontrast-weighted MRI compared with histopathology.

PubMed

Li, Tao; Li, Xin; Zhao, Xihai; Zhou, Weihua; Cai, Zulong; Yang, Li; Guo, Aitao; Zhao, Shaohong

2012-05-01

The objective of our study was to evaluate the feasibility of ex vivo high-resolution multicontrast-weighted MRI to accurately classify human coronary atherosclerotic plaques according to the American Heart Association classification. Thirteen human cadaver heart specimens were imaged using high-resolution multicontrast-weighted MR technique (T1-weighted, proton density-weighted, and T2-weighted). All MR images were matched with histopathologic sections according to the landmark of the bifurcation of the left main coronary artery. The sensitivity and specificity of MRI for the classification of plaques were determined, and Cohen's kappa analysis was applied to evaluate the agreement between MRI and histopathology in the classification of atherosclerotic plaques. One hundred eleven MR cross-sectional images obtained perpendicular to the long axis of the proximal left anterior descending artery were successfully matched with the histopathologic sections. For the classification of plaques, the sensitivity and specificity of MRI were as follows: type I-II (near normal), 60% and 100%; type III (focal lipid pool), 80% and 100%; type IV-V (lipid, necrosis, fibrosis), 96.2% and 88.2%; type VI (hemorrhage), 100% and 99.0%; type VII (calcification), 93% and 100%; and type VIII (fibrosis without lipid core), 100% and 99.1%, respectively. Isointensity, which indicates lipid composition on histopathology, was detected on MRI in 48.8% of calcified plaques. Agreement between MRI and histopathology for plaque classification was 0.86 (p < 0.001). Ex vivo high-resolution multicontrast-weighted MRI can accurately classify advanced atherosclerotic plaques in human coronary arteries.

Hyperspectral Imaging Analysis for the Classification of Soil Types and the Determination of Soil Total Nitrogen

PubMed Central

Jia, Shengyao; Li, Hongyang; Wang, Yanjie; Tong, Renyuan; Li, Qing

2017-01-01

Soil is an important environment for crop growth. Quick and accurately access to soil nutrient content information is a prerequisite for scientific fertilization. In this work, hyperspectral imaging (HSI) technology was applied for the classification of soil types and the measurement of soil total nitrogen (TN) content. A total of 183 soil samples collected from Shangyu City (People’s Republic of China), were scanned by a near-infrared hyperspectral imaging system with a wavelength range of 874–1734 nm. The soil samples belonged to three major soil types typical of this area, including paddy soil, red soil and seashore saline soil. The successive projections algorithm (SPA) method was utilized to select effective wavelengths from the full spectrum. Pattern texture features (energy, contrast, homogeneity and entropy) were extracted from the gray-scale images at the effective wavelengths. The support vector machines (SVM) and partial least squares regression (PLSR) methods were used to establish classification and prediction models, respectively. The results showed that by using the combined data sets of effective wavelengths and texture features for modelling an optimal correct classification rate of 91.8%. could be achieved. The soil samples were first classified, then the local models were established for soil TN according to soil types, which achieved better prediction results than the general models. The overall results indicated that hyperspectral imaging technology could be used for soil type classification and soil TN determination, and data fusion combining spectral and image texture information showed advantages for the classification of soil types. PMID:28974005

Towards a needle-free diagnosis of malaria: in vivo identification and classification of red and white blood cells containing haemozoin.

PubMed

Burnett, Jennifer L; Carns, Jennifer L; Richards-Kortum, Rebecca

2017-11-07

Optical detection of circulating haemozoin has been suggested as a needle free method to diagnose malaria using in vivo microscopy. Haemozoin is generated within infected red blood cells by the malaria parasite, serving as a highly specific, endogenous biomarker of malaria. However, phagocytosis of haemozoin by white blood cells which persist after the infection is resolved presents the potential for false positive diagnosis; therefore, the focus of this work is to identify a feature of the haemozoin signal to discriminate between infected red blood cells and haemozoin-containing white blood cells. Conventional brightfield microscopy of thin film blood smears was used to analyse haemozoin absorbance signal in vitro. Cell type and parasite maturity were morphologically determined using colocalized DAPI staining. The ability of features to discriminate between infected red blood cells and haemozoin-containing white blood cells was evaluated using images of smears from subjects infected with two species of Plasmodium, Plasmodium yoelii and Plasmodium falciparum. Discriminating features identified by blood smear microscopy were characterized in vivo in P. yoelii-infected mice. Two features of the haemozoin signal, haemozoin diameter and normalized intensity difference, were identified as potential parameters to differentiate infected red blood cells and haemozoin-containing white blood cells. Classification performance was evaluated using the area under the receiver operating characteristic curve, with area under the curve values of 0.89 for the diameter parameter and 0.85 for the intensity parameter when assessed in P. yoelii samples. Similar results were obtained from P. falciparum blood smears, showing an AUC of 0.93 or greater for both classification features. For in vivo investigations, the intensity-based metric was the best classifier, with an AUC of 0.91. This work demonstrates that size and intensity features of haemozoin absorbance signal collected by in vivo microscopy are effective classification metrics to discriminate infected red blood cells from haemozoin-containing white blood cells. This reduces the potential for false positive results associated with optical imaging strategies for in vivo diagnosis of malaria based on the endogenous biomarker haemozoin.

Morphology of Mesiobuccal Root Canals of Maxillary First Molars: a comparison of CBCT scanning and Cross-sectioning.

PubMed

Lyra, Carina Maria; Delai, Débora; Pereira, Keila Cristina Rausch; Pereira, Guy Martins; Pasternak Júnior, Bráulio; Oliveira, César Augusto Pereira

2015-10-01

The aim of this study was to evaluate the mesiobuccal root of maxillary first molars, according to the root canal configuration, prevalence and location of isthmuses at 3 and 6 mm from the apex, comparing cone-beam computed tomography (CBCT) analysis and cross sectioning of roots by thirds. Images of the mesiobuccal root of 100 maxillary first molars were acquired by CBCT and then roots were cross-sectioned into two parts, starting at 3 mm from the apex. Data were recorded and analyzed according to Weine's classification for root canal configuration, and Hsu and Kim's classification for isthmuses. In the analysis of CBCT images, 8 root canals were classified as type I, 57 as type II, 35 as type III. In the cross-sectioning technique, 19 root canals were classified as type I, 60 as type II, 20 as type III and 1 as type IV. The classification of isthmuses was predominantly type I in both CBCT and cross-sectioning evaluations for sections at 3 mm from the apex, while for sections at 6 mm from the apex, the classification of isthmuses was predominantly types V and II in CBCT and cross-sectioning evaluations, respectively. The cross-sectioning technique showed better results in detection of the internal morphology of root canals than CBCT scanning.

Domain Drivers in the Modularization of FLOSS Systems

NASA Astrophysics Data System (ADS)

Capiluppi, Andrea

The classification of software systems into types has been achieved in the past by observing both their specifications and behavioral patterns: the SPE classification, for instance, and its further supplements and refinements, has identified the S-type (i.e., fully specified), the P-type (i.e., specified but dependent on the context) and the E-type (i.e., addressing evolving problems) among the software systems.

Circulating 25-hydroxyvitamin D, IRS1 variant rs2943641 and insulin resistance: replication of a gene-nutrient interaction in four populations of different ancestries

USDA-ARS?s Scientific Manuscript database

Associations of either insulin receptor substrate 1 (IRS1) variants or circulating 25-hydroxyvitamin D (25(OH)D) with type 2 diabetes and insulin resistance are inconsistent. This study sought to determine whether circulating 25(OH)D modulates the association of a potentially functional variant at I...

7 CFR 51.3198 - Size classifications.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 2 2012-01-01 2012-01-01 false Size classifications. 51.3198 Section 51.3198... STANDARDS) United States Standards for Grades of Bermuda-Granex-Grano Type Onions Size Classifications § 51.3198 Size classifications. Size shall be specified in connection with the grade in terms of minimum...

7 CFR 51.3198 - Size classifications.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 2 2011-01-01 2011-01-01 false Size classifications. 51.3198 Section 51.3198... STANDARDS) United States Standards for Grades of Bermuda-Granex-Grano Type Onions Size Classifications § 51.3198 Size classifications. Size shall be specified in connection with the grade in terms of minimum...

7 CFR 51.3198 - Size classifications.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 2 2010-01-01 2010-01-01 false Size classifications. 51.3198 Section 51.3198... STANDARDS) United States Standards for Grades of Bermuda-Granex-Grano Type Onions Size Classifications § 51.3198 Size classifications. Size shall be specified in connection with the grade in terms of minimum...

Microparticle Shedding by Erythrocytes, Monocytes and Vascular Smooth Muscular Cells Is Reduced by Aspirin in Diabetic Patients.

PubMed

Chiva-Blanch, Gemma; Suades, Rosa; Padró, Teresa; Vilahur, Gemma; Peña, Esther; Ybarra, Juan; Pou, Jose M; Badimon, Lina

2016-07-01

Diabetes mellitus is associated with an enhanced risk for cardiovascular disease and its prevalence is increasing. Diabetes induces metabolic stress on blood and vascular cells, promoting platelet activation and vascular dysfunction. The level of vascular cell activation can be measured by the number and phenotype of microparticles found in the circulation. The aim of this study was to investigate the effect of a platelet-inhibitory dose of aspirin on the number and type of microparticles shed to the circulation. Forty-three diabetic patients were enrolled in the study and received a daily dose of 100mg of aspirin for 10 days to cover the average platelet life-span in the circulation. Before and after the intervention period, circulating microparticles were characterized and quantified by flow cytometry. Type 1 diabetic patients had about twice the number of tissue factor-positive circulating microparticles (derived both from platelets and monocytes) and endothelial-derived E-selectin positive microparticles than type 2 diabetic patients. Aspirin therapy significantly inhibited platelets since cyclooxygenase 1 derived thromboxane generation levels were reduced by 99%. Microparticles derived from erythrocytes, activated monocytes, and smooth muscle cells were significantly reduced after 10 days of aspirin administration. These results indicate that: a) vascular and blood cells in type 1 diabetic patients are exposed to more sustained stress shown by their specific microparticle origin and levels; b) aspirin therapy inhibits vascular wall cell activation and microparticle shedding, and c) the effects of aspirin are similar in type 1 and 2 diabetes. Copyright © 2016 Sociedad Española de Cardiología. Published by Elsevier España, S.L.U. All rights reserved.

A Classification of Statistics Courses (A Framework for Studying Statistical Education)

ERIC Educational Resources Information Center

Turner, J. C.

1976-01-01

A classification of statistics courses in presented, with main categories of "course type,""methods of presentation,""objectives," and "syllabus." Examples and suggestions for uses of the classification are given. (DT)

Clinically orientated classification incorporating shoulder balance for the surgical treatment of adolescent idiopathic scoliosis.

PubMed

Elsebaie, H B; Dannawi, Z; Altaf, F; Zaidan, A; Al Mukhtar, M; Shaw, M J; Gibson, A; Noordeen, H

2016-02-01

The achievement of shoulder balance is an important measure of successful scoliosis surgery. No previously described classification system has taken shoulder balance into account. We propose a simple classification system for AIS based on two components which include the curve type and shoulder level. Altogether, three curve types have been defined according to the size and location of the curves, each curve pattern is subdivided into type A or B depending on the shoulder level. This classification was tested for interobserver reproducibility and intraobserver reliability. A retrospective analysis of the radiographs of 232 consecutive cases of AIS patients treated surgically between 2005 and 2009 was also performed. Three major types and six subtypes were identified. Type I accounted for 30 %, type II 28 % and type III 42 %. The retrospective analysis showed three patients developed a decompensation that required extension of the fusion. One case developed worsening of shoulder balance requiring further surgery. This classification was tested for interobserver and intraobserver reliability. The mean kappa coefficients for interobserver reproducibility ranged from 0.89 to 0.952, while the mean kappa value for intraobserver reliability was 0.964 indicating a good-to-excellent reliability. The treatment algorithm guides the spinal surgeon to achieve optimal curve correction and postoperative shoulder balance whilst fusing the smallest number of spinal segments. The high interobserver reproducibility and intraobserver reliability makes it an invaluable tool to describe scoliosis curves in everyday clinical practice.

Border Lakes land-cover classification

Treesearch

Marvin Bauer; Brian Loeffelholz; Doug Shinneman

2009-01-01

This document contains metadata and description of land-cover classification of approximately 5.1 million acres of land bordering Minnesota, U.S.A. and Ontario, Canada. The classification focused on the separation and identification of specific forest-cover types. Some separation of the nonforest classes also was performed. The classification was derived from multi-...

The Extension of Holland's Occupational Classification to All Occupations in the Dictionary of Occupational Titles.

ERIC Educational Resources Information Center

Viernstein, Mary Cowan

Two methods are presented for extending Holland's occupational classification to include all occupations in the Dictionary of Occupational Titles (DOT). Holland's classification is based on a theory of personality types, with occupations in the classification organized into major categories (Realistic, Investigative, Artistic, Social,…

Extensions to the Speech Disorders Classification System (SDCS)

ERIC Educational Resources Information Center

Shriberg, Lawrence D.; Fourakis, Marios; Hall, Sheryl D.; Karlsson, Heather B.; Lohmeier, Heather L.; McSweeny, Jane L.; Potter, Nancy L.; Scheer-Cohen, Alison R.; Strand, Edythe A.; Tilkens, Christie M.; Wilson, David L.

2010-01-01

This report describes three extensions to a classification system for paediatric speech sound disorders termed the Speech Disorders Classification System (SDCS). Part I describes a classification extension to the SDCS to differentiate motor speech disorders from speech delay and to differentiate among three sub-types of motor speech disorders.…

Halitosis: a new definition and classification.

PubMed

Aydin, M; Harvey-Woodworth, C N

2014-07-11

There is no universally accepted, precise definition, nor standardisation in terminology and classification of halitosis. To propose a new definition, free from subjective descriptions (faecal, fish odour, etc), one-time sulphide detector readings and organoleptic estimation of odour levels, and excludes temporary exogenous odours (for example, from dietary sources). Some terms previously used in the literature are revised. A new aetiologic classification is proposed, dividing pathologic halitosis into Type 1 (oral), Type 2 (airway), Type 3 (gastroesophageal), Type 4 (blood-borne) and Type 5 (subjective). In reality, any halitosis complaint is potentially the sum of these types in any combination, superimposed on the Type 0 (physiologic odour) present in health. This system allows for multiple diagnoses in the same patient, reflecting the multifactorial nature of the complaint. It represents the most accurate model to understand halitosis and forms an efficient and logical basis for clinical management of the complaint.

Oxfordshire community stroke project clinical stroke syndrome and appearances of tissue and vascular lesions on pretreatment ct in hyperacute ischemic stroke among the first 510 patients in the Third International Stroke Trial (IST-3).

PubMed

Kobayashi, Adam; Wardlaw, Joanna M; Lindley, Richard I; Lewis, Steff C; Sandercock, Peter A G; Czlonkowska, Anna

2009-03-01

The Oxfordshire Community Stroke Project (OCSP) clinical stroke syndrome classification correlates well with the stroke lesion in established ischemic stroke, but there are few data in patients with hyperacute stroke. We wished to assess whether the OCSP correlated with the site and size of the ischemic lesion and location of cerebral vessel lesion on computed tomography (CT) in hyperacute stroke. Prospective study of ischemic stroke patients presenting within 6 hours of onset in the Third International Stroke Trial (IST-3), a randomized, controlled trial of rt-PA. OCSP syndrome was assigned by a computer-based algorithm. The CT assessment was made by a neuroradiologist blinded to clinical details. We assessed baseline data and CT findings for the first 510 patients; early tissue ischemic changes were present in 329/510 (65%) total anterior circulation syndrome (TACS) - 79%; partial anterior circulation syndrome (PACS) - 57%, lacunar syndrome (LACS) - 40%; posterior circulation syndrome (POCS) - 33%. The site and size of ischemic change on CT was compatible with the clinical syndrome in 79%, 37%, 2%, and 14%, respectively. Assuming that all patients with a normal CT scan will develop an incompatible lesion these numbers reflected the "worst possible scenario." For the "best possible scenario" we presumed that those with a normal CT will develop concordant ischemic change and the proportions were 100%, 80%, 62% and 81%, respectively. The hyperattenuated artery sign was seen in 206/510 (40%); (TACS 54%; PACS 35%, LACS 5%, and POCS 19%). Within 6 hours of stroke, in patients with a nonlacunar syndrome, the OCSP syndrome correlated well with the pattern of ischemic change on CT. For clinicians who wish to restrict the use of thrombolytic therapy to large-artery ischemic stroke, concordance of clinical and CT appearances may give greater confidence in making therapeutic decisions in hyperacute stroke. In centers where immediate access to MR is limited, use of the classification may help focus use of MR on patients with suspected LACS and POCS. The utility of the classification may further increase if IST-3 establishes that the OCSP syndrome significantly modifies response to thrombolytic therapy.

Money circulation networks reveal emerging geographical communities

NASA Astrophysics Data System (ADS)

Brockmann, D.; Theis, F.; David, V.

2008-03-01

Geographical communities and their boundaries are key determinants of various spatially extended dynamical phenomena. Examples are migration dynamics of species, the spread of infectious diseases, bioinvasive processes, and the spatial evolution of language. We address the question to what extend multiscale human transportation networks encode geographical community structures, how they differ from geopolitical classifications, whether they are spatially coherent, and analyse their structure as a function of length scale. Our analysis is based on a proxy network for human transportation obtained from the geographic circulation of more than 10 million dollar bills in the United States recorded at the bill tracking website www.wheresgeorge.com. The data extends that of a previous study (Brockmann et al., Nature 2006) on the discovery of scaling laws of human travel by an order of magnitude and permits an approach to multiscale human transportation from a network perspective.

What's in a Name? A Comparison of Methods for Classifying Predominant Type of Maltreatment

ERIC Educational Resources Information Center

Lau, A.S.; Leeb, R.T.; English, D.; Graham, J.C.; Briggs, E.C.; Brody, K.E.; Marshall, J.M.

2005-01-01

Objective:: The primary aim of the study was to identify a classification scheme, for determining the predominant type of maltreatment in a child's history that best predicts differences in developmental outcomes. Method:: Three different predominant type classification schemes were examined in a sample of 519 children with a history of alleged…

Coniferous forest habitat types of central and southern Utah

Treesearch

Andrew P. Youngblood; Ronald L. Mauk

1985-01-01

A land-classification system based upon potential natural vegetation is presented for the coniferous forests of central and southern Utah. It is based on reconnaissance sampling of about 720 stands. A hierarchical taxonomic classification of forest sites was developed using the habitat type concept. Seven climax series, 37 habitat types, and six additional phases of...

Forest habitat types of Montana

Treesearch

Robert D. Pfister; Bernard L. Kovalchik; Stephen F. Arno; Richard C. Presby

1977-01-01

A land-classification system based upon potential natural vegetation is presented for the forests of Montana. It is based on an intensive 4-year study and reconnaissance sampling of about 1,500 stands. A hierarchical classification of forest sites was developed using the habitat type concept. A total of 9 climax series, 64 habitat types, and 37 additional phases of...

Does the Modified Gartland Classification Clarify Decision Making?

PubMed

Leung, Sophia; Paryavi, Ebrahim; Herman, Martin J; Sponseller, Paul D; Abzug, Joshua M

2018-01-01

The modified Gartland classification system for pediatric supracondylar fractures is often utilized as a communication tool to aid in determining whether or not a fracture warrants operative intervention. This study sought to determine the interobserver and intraobserver reliability of the Gartland classification system, as well as to determine whether there was agreement that a fracture warranted operative intervention regardless of the classification system. A total of 200 anteroposterior and lateral radiographs of pediatric supracondylar humerus fractures were retrospectively reviewed by 3 fellowship-trained pediatric orthopaedic surgeons and 2 orthopaedic residents and then classified as type I, IIa, IIb, or III. The surgeons then recorded whether they would treat the fracture nonoperatively or operatively. The κ coefficients were calculated to determine interobserver and intraobserver reliability. Overall, the Wilkins-modified Gartland classification has low-moderate interobserver reliability (κ=0.475) and high intraobserver reliability (κ=0.777). A low interobserver reliability was found when differentiating between type IIa and IIb (κ=0.240) among attendings. There was moderate-high interobserver reliability for the decision to operate (κ=0.691) and high intraobserver reliability (κ=0.760). Decreased interobserver reliability was present for decision to operate among residents. For fractures classified as type I, the decision to operate was made 3% of the time and 27% for type IIa. The decision was made to operate 99% of the time for type IIb and 100% for type III. There is almost full agreement for the nonoperative treatment of Type I fractures and operative treatment for type III fractures. There is agreement that type IIb fractures should be treated operatively and that the majority of type IIa fractures should be treated nonoperatively. However, the interobserver reliability for differentiating between type IIa and IIb fractures is low. Our results validate the Gartland classfication system as a method to help direct treatment of pediatric supracondylar humerus fractures, although the modification of the system, IIa versus IIb, seems to have limited reliability and utility. Terminology based on decision to treat may lead to a more clinically useful classification system in the evaluation and treatment of pediatric supracondylar humerus fractures. Level III-diagnostic studies.

The search for structure - Object classification in large data sets. [for astronomers

NASA Technical Reports Server (NTRS)

Kurtz, Michael J.

1988-01-01

Research concerning object classifications schemes are reviewed, focusing on large data sets. Classification techniques are discussed, including syntactic, decision theoretic methods, fuzzy techniques, and stochastic and fuzzy grammars. Consideration is given to the automation of MK classification (Morgan and Keenan, 1973) and other problems associated with the classification of spectra. In addition, the classification of galaxies is examined, including the problems of systematic errors, blended objects, galaxy types, and galaxy clusters.

Automated connectionist-geostatistical classification as an approach to identify sea ice and land ice types, properties and provinces

NASA Astrophysics Data System (ADS)

Goetz-Weiss, L. R.; Herzfeld, U. C.; Trantow, T.; Hunke, E. C.; Maslanik, J. A.; Crocker, R. I.

2016-12-01

An important problem in model-data comparison is the identification of parameters that can be extracted from observational data as well as used in numerical models, which are typically based on idealized physical processes. Here, we present a suite of approaches to characterization and classification of sea ice and land ice types, properties and provinces based on several types of remote-sensing data. Applications will be given to not only illustrate the approach, but employ it in model evaluation and understanding of physical processes. (1) In a geostatistical characterization, spatial sea-ice properties in the Chukchi and Beaufort Sea and in Elsoon Lagoon are derived from analysis of RADARSAT and ERS-2 SAR data. (2) The analysis is taken further by utilizing multi-parameter feature vectors as inputs for unsupervised and supervised statistical classification, which facilitates classification of different sea-ice types. (3) Characteristic sea-ice parameters, as resultant from the classification, can then be applied in model evaluation, as demonstrated for the ridging scheme of the Los Alamos sea ice model, CICE, using high-resolution altimeter and image data collected from unmanned aircraft over Fram Strait during the Characterization of Arctic Sea Ice Experiment (CASIE). The characteristic parameters chosen in this application are directly related to deformation processes, which also underly the ridging scheme. (4) The method that is capable of the most complex classification tasks is the connectionist-geostatistical classification method. This approach has been developed to identify currently up to 18 different crevasse types in order to map progression of the surge through the complex Bering-Bagley Glacier System, Alaska, in 2011-2014. The analysis utilizes airborne altimeter data and video image data and satellite image data. Results of the crevasse classification are compare to fracture modeling and found to match.

Forest vegetation of the Black Hills National Forest of South Dakota and Wyoming: A habitat type classification

Treesearch

George R. Hoffman; Robert R. Alexander

1987-01-01

A vegetation classification based on concepts and methods developed by Daubenmire was used to identify 12 forest habitat types and one shrub habitat type in the Black Hills. Included were two habitat types in the Quercus macrocarpa series, seven in the Pinus ponderosa series, one in the Populus tremuloides series, two in the Picea glaucci series, and one in the...

Loss of 5α-Reductase Type 1 Accelerates the Development of Hepatic Steatosis but Protects Against Hepatocellular Carcinoma in Male Mice

PubMed Central

Dowman, Joanna K.; Hopkins, Laurence J.; Reynolds, Gary M.; Armstrong, Matthew J.; Nasiri, Maryam; Nikolaou, Nikolaos; van Houten, E. Leonie A. F.; Visser, Jenny A.; Morgan, Stuart A.; Lavery, Gareth G.; Oprescu, Andrei; Hübscher, Stefan G.; Newsome, Philip N.

2013-01-01

Nonalcoholic fatty liver disease (NAFLD) has been associated with glucocorticoid excess and androgen deficiency, yet in the majority of patients with steatohepatitis, circulating cortisol and androgen levels are normal. The enzyme 5α-reductase (5αR) has a critical role in androgen and glucocorticoid action. We hypothesize that 5αR has an important role in the pathogenesis of steatohepatitis through regulation of intracrine/paracrine hormone availability. Human liver samples from patients with NAFLD and normal donor tissue were used for gene expression and immunohistochemical analysis. NAFLD samples were scored using the Kleiner classification. In addition, 5αR1−/−, 5αR2−/−, and wild-type (WT) mice were fed normal chow or American lifestyle-induced obesity syndrome (ALIOS) diet for 6 or 12 months. Liver histology was graded and staged. Hepatic and circulating free fatty acid and triglyceride levels were quantified, and gene and protein expression was measured by real-time PCR and immunohistochemistry. 5αR1 and -2 were highly expressed in human liver, and 5αR1 protein expression increased with severity of NAFLD. 5αR1−/− (but not 5αR2−/−) mice fed an ALIOS diet developed greater hepatic steatosis than WT mice, and hepatic mRNA expression of genes involved in insulin signaling was decreased. Furthermore, 60% of WT mice developed focal hepatocellular lesions consistent with hepatocellular carcinoma after 12 months of the ALIOS diet, compared with 20% of 5αR2−/− and 0% of 5αR1−/− mice (P < .05). 5αR1 deletion accelerates the development of hepatic steatosis but may protect against the development of NAFLD-related hepatocellular neoplasia and therefore has potential as a therapeutic target. PMID:24080367

Phacomatosis pigmento-pigmentaria: should we add a new type of phacomatosis? Fact and controversies.

PubMed

Wolf, Ronni; Wolf, Danny; Ruocco, Vincenzo; Baroni, Adone; Ruocco, Eleonora

2013-01-01

There are currently five types of recognized phacomatosis pigmentovascularis plus one more, phacomatosis pigmentokeratotica, making six types altogether. Should we stop here and consider the classification as being complete? Or, do we leave room to add more types or, alternatively, lump the ones we have together and shorten the list? We present our reasons for adding one or two new types of phacomatoses to the current classification, in full recognition that it is already complicated and somewhat cumbersome. We consider that the benefits of doing so outweigh any additional strain on the already complicated classification. We expect that this might not sit well with some of our colleagues, but we are prepared to do battle. Copyright © 2013 Elsevier Inc. All rights reserved.

The Effect of Omega-3 on Circulating Adiponectin in Adults with Type 2 Diabetes Mellitus: A Systematic Review and Meta-Analysis of Randomized Controlled Trials.

PubMed

Bahreini, Mehdi; Ramezani, Amir-Hossein; Shishehbor, Farideh; Mansoori, Anahita

2018-01-04

Whether consumption of omega-3 affects circulating adiponectin has not been established. The objective of this study was to evaluate the effect of omega-3 (food or supplement) on circulating adiponectin in patients with type 2 diabetes through a systematic review of meta-analyses of randomized controlled trials. PubMed, Scopus and Web of Science were searched for relevant studies through May 2016. Two researchers screened and abstracted the literature independently. Pooled estimates were obtained using the random-effects models. Overall, omega-3 increased adiponectin by 0.57 µg/mL (95% confidence interval [CI] 0.15 to 1.31; p=0.01, I-square=74.2% p for heterogeneity <0.001). The source of observed heterogeneity was explored by subgroup analyses. In subgroup analyses, adiponectin levels increased only in those who had consumed omega-3 for more than 8 weeks. This systematic review and meta-analysis of randomized, placebo-controlled clinical trials suggests that omega-3 in patients with type 2 diabetes increases circulating adiponectin. These findings support the potentially beneficial effects of dietary omega-3 in patients with type 2 diabetes on pathways related to adiponectin metabolism. Copyright © 2017 Diabetes Canada. Published by Elsevier Inc. All rights reserved.

Multilocus sequence typing of Chlamydia trachomatis among men who have sex with men reveals cocirculating strains not associated with specific subpopulations.

PubMed

Bom, Reinier J M; Matser, Amy; Bruisten, Sylvia M; van Rooijen, Martijn S; Heijman, Titia; Morré, Servaas A; de Vries, Henry J C; Schim van der Loeff, Maarten F

2013-09-01

Previous studies identified specific Chlamydia trachomatis strains circulating among men who have sex with men (MSM). This study investigates whether distinct C. trachomatis strains circulate among subpopulations within the MSM community. Participants were recruited at the sexually transmitted infection clinic of the Public Health Service of Amsterdam from 2008 to 2009. C. trachomatis samples were typed using multilocus sequence typing. Epidemiological and clinical data were derived from questionnaires and patient records. Typing of 277 samples from 260 MSM identified distinct C. trachomatis strains circulating concurrently over time. Men with lymphogranuloma venereum (LGV)-inducing strains were more likely to be infected with human immunodeficiency virus, more often had a history of STI, and had a higher frequency of risky sexual behavior. No such associations were found for non-LGV-inducing strains. MSM infected with heterosexual-associated strains were often younger (P = .04) and more often reported sex with women (P = .03), compared with men infected with MSM-associated strains. With the exception of LGV-inducing strains, no evidence was found that different C. trachomatis strains circulated in distinct subpopulations of MSM. This indicates that no separate transmission networks for C. trachomatis among MSM existed. However, younger MSM and bisexuals were more often infected with heterosexual-associated C. trachomatis strains.

Millimeter wave complementary metal-oxide-semiconductor on-chip hexagonal nano-ferrite circulator

NASA Astrophysics Data System (ADS)

Chao, Liu; Oukacha, Hassan; Fu, Enjin; Koomson, Valencia Joyner; Afsar, Mohammed N.

2015-05-01

Hexagonal ferrites such as M-type BaFe12O19 and SrFe12O19 have strong uniaxial anisotropic magnetic field and remanent magnetism. The nano-sized ferrite powder exhibits high compatibility and processability in composite material. New magnetic devices using the M-type ferrite materials can work in the tens of GHz frequency range from microwave to millimeter wave without the application of strong external magnetic field. The micro- and nano-sized hexagonal ferrite can be conveniently utilized to fabricate magnetic components integrated in CMOS integrated circuits as thin as several micrometers. The micro-fabrication method of such nano ferrite device is presented in this paper. A circulator working at 60 GHz is designed and integrated into the commercial CMOS process. The circulator exhibits distinct circulation properties in the frequency range from 56 GHz to 58 GHz.

Evaluation of Two Commercial Enzyme-Linked Immunosorbent Assay Kits for the Detection of Human Circulating Metrnl.

PubMed

Zheng, Si-Li; Li, Zhi-Yong; Zhang, Zheng; Wang, Dong-Sheng; Xu, Jian; Miao, Chao-Yu

2018-04-01

Metrnl is a newly discovered secreted protein with neurotrophic activity and metabolic effect, while in earlier studies its circulating level in human was not explored. We evaluated two commercial enzyme-linked immunosorbent assay kits (DY7867-05, R&D Systems and SK00478-02, Aviscera Bioscience) for the detection of human circulating Metrnl. The DY7867-05 kit showed superiority over the SK00478-02 kit since it generated better curve fitting degree, smaller variation among tests, higher inter-assay reproducibility and better specificity, and could effectively detect human Metrnl in six types of blood samples. Subsequent analysis was performed using the DY7867-05 kit. Sample storage conditions were investigated. No gender difference in circulating Metrnl levels was found, while people with newly diagnosed type 2 diabetes mellitus (T2DM) had significantly lower Metrnl levels compared to the healthy controls.

The World Bank Photo Library. A Report on Classification, Indexing, and Retrieval of Slide Collection; Organization and Circulation of Visual Materials and Matters Relating to Photo Library Administration.

ERIC Educational Resources Information Center

Bikshapathi, Adepu

The World Bank, a specialized agency of the United Nations, is devoted to promoting the economic development of its member nations. Its photo library, with a collection of nearly 25,000 black-and-white photographs and color slides, serves as a resource center for various activities of the Bank and other organizations. Intended as a background…

Classification of Cowpox Viruses into Several Distinct Clades and Identification of a Novel Lineage

PubMed Central

Franke, Annika; Pfaff, Florian; Jenckel, Maria; Hoffmann, Bernd; Höper, Dirk; Antwerpen, Markus; Meyer, Hermann; Beer, Martin; Hoffmann, Donata

2017-01-01

Cowpox virus (CPXV) was considered as uniform species within the genus Orthopoxvirus (OPV). Previous phylogenetic analysis indicated that CPXV is polyphyletic and isolates may cluster into different clades with two of these clades showing genetic similarities to either variola (VARV) or vaccinia viruses (VACV). Further analyses were initiated to assess both the genetic diversity and the evolutionary background of circulating CPXVs. Here we report the full-length sequences of 20 CPXV strains isolated from different animal species and humans in Germany. A phylogenetic analysis of altogether 83 full-length OPV genomes confirmed the polyphyletic character of the species CPXV and suggested at least four different clades. The German isolates from this study mainly clustered into two CPXV-like clades, and VARV- and VACV-like strains were not observed. A single strain, isolated from a cotton-top tamarin, clustered distantly from all other CPXVs and might represent a novel and unique evolutionary lineage. The classification of CPXV strains into clades roughly followed their geographic origin, with the highest clade diversity so far observed for Germany. Furthermore, we found evidence for recombination between OPV clades without significant disruption of the observed clustering. In conclusion, this analysis markedly expands the number of available CPXV full-length sequences and confirms the co-circulation of several CPXV clades in Germany, and provides the first data about a new evolutionary CPXV lineage. PMID:28604604

Noninvasive prenatal detection of sex chromosomal aneuploidies by sequencing circulating cell-free DNA from maternal plasma.

PubMed

Mazloom, Amin R; Džakula, Željko; Oeth, Paul; Wang, Huiquan; Jensen, Taylor; Tynan, John; McCullough, Ron; Saldivar, Juan-Sebastian; Ehrich, Mathias; van den Boom, Dirk; Bombard, Allan T; Maeder, Margo; McLennan, Graham; Meschino, Wendy; Palomaki, Glenn E; Canick, Jacob A; Deciu, Cosmin

2013-06-01

Whole-genome sequencing of circulating cell free (ccf) DNA from maternal plasma has enabled noninvasive prenatal testing for common autosomal aneuploidies. The purpose of this study was to extend the detection to include common sex chromosome aneuploidies (SCAs): [47,XXX], [45,X], [47,XXY], and [47,XYY] syndromes. Massively parallel sequencing was performed on ccf DNA isolated from the plasma of 1564 pregnant women with known fetal karyotype. A classification algorithm for SCA detection was constructed and trained on this cohort. Another study of 411 maternal samples from women with blinded-to-laboratory fetal karyotypes was then performed to determine the accuracy of the classification algorithm. In the training cohort, the new algorithm had a detection rate (DR) of 100% (95%CI: 82.3%, 100%), a false positive rate (FPR) of 0.1% (95%CI: 0%, 0.3%), and nonreportable rate of 6% (95%CI: 4.9%, 7.4%) for SCA determination. The blinded validation yielded similar results: DR of 96.2% (95%CI: 78.4%, 99.8%), FPR of 0.3% (95%CI: 0%, 1.8%), and nonreportable rate of 5% (95%CI: 3.2%, 7.7%) for SCA determination Noninvasive prenatal identification of the most common sex chromosome aneuploidies is possible using ccf DNA and massively parallel sequencing with a high DR and a low FPR. © 2013 John Wiley & Sons, Ltd.

Central sympathoexcitatory actions of angiotensin II: role of type 1 angiotensin II receptors.

PubMed

DiBona, G F

1999-01-01

The role of the renin-angiotensin system in the control of sympathetic nerve activity is reviewed. Two general mechanisms are considered, one that involves the effects of circulating angiotensin II (AngII) on the central nervous system and a second that involves the central nervous system effects of AngII that originates within the central nervous system. The role of type 1 AngII receptors in discrete brain sites that mediate the sympathoexcitatory actions of AngII of either circulating or central nervous system origin is examined. AngII of circulating origin has ready access to the subfornical organ and area postrema, where it can bind to type 1 AngII receptors on neurons whose connections to the nucleus tractus solitarius and rostral ventrolateral medulla result in sympathoexcitation. In the rostral ventrolateral medulla, angiotensin peptides of central nervous system origin, likely involving angiotensin species in addition to AngII and binding to receptors other than type 1 or 2 AngII receptors, tonically support sympathetic nerve activity.

Identification and classification of traditional Chinese medicine syndrome types among senior patients with vascular mild cognitive impairment using latent tree analysis.

PubMed

Fu, Chen; Zhang, Nevin Lianwen; Chen, Bao-Xin; Chen, Zhou Rong; Jin, Xiang Lan; Guo, Rong-Juan; Chen, Zhi-Gang; Zhang, Yun-Ling

2017-05-01

To treat patients with vascular mild cognitive impairment (VMCI) using traditional Chinese medicine (TCM), it is necessary to classify the patients into TCM syndrome types and to apply different treatments to different types. In this paper, we investigate how to properly carry out the classification for patients with VMCI aged 50 or above using a novel data-driven method known as latent tree analysis (LTA). A cross-sectional survey on VMCI was carried out in several regions in Northern China between February 2008 and February 2012 which resulted in a data set that involves 803 patients and 93 symptoms. LTA was performed on the data to reveal symptom co-occurrence patterns, and the patients were partitioned into clusters in multiple ways based on the patterns. The patient clusters were matched up with syndrome types, and population statistics of the clusters are used to quantify the syndrome types and to establish classification rules. Eight syndrome types are identified: Qi deficiency, Qi stagnation, Blood deficiency, Blood stasis, Phlegm-dampness, Fire-heat, Yang deficiency, and Yin deficiency. The prevalence and symptom occurrence characteristics of each syndrome type are determined. Quantitative classification rules are established for determining whether a patient belongs to each of the syndrome types. A solution for the TCM syndrome classification problem for patients with VMCI and aged 50 or above is established based on the LTA of unlabeled symptom survey data. The results can be used as a reference in clinic practice to improve the quality of syndrome differentiation and to reduce diagnosis variances across physicians. They can also be used for patient selection in research projects aimed at finding biomarkers for the syndrome types and in randomized control trials aimed at determining the efficacy of TCM treatments of VMCI.

Linking storm surge activity and circulation variability along the Spanish coast through a synoptic pattern classification

NASA Astrophysics Data System (ADS)

Rasilla Álvarez, Domingo; Garcia Codrón, Juan Carlos

2010-05-01

The potentially negative consequences resulting from the estimations of global sea level rising along the current century are a matter of serious concern in many coastal areas worldwide. Most of the negative consequences of the sea level variability, such as flooding or erosion, are linked to episodic events of strong atmospheric forcing represented by deep atmospheric disturbances, especially if they combine with extreme astronomical high tides. Moreover, the interaction between the prevailing flows during such events and the actual orientation of the coast line might accelerate or mitigate such impacts. This contribution analyses sea surge variations measured at five tide-gauge stations located around the Iberian Peninsula and their relationships with regional scale circulation patterns with local-scale winds. Its aim is to improve the knowledge of surge related-coastal-risks by analysing the relationship between surges and their atmospheric forcing factors at different spatial scales. The oceanographic data set consists of hourly data from 5 tide gauge stations (Santander, Vigo, Bonanza, Málaga, Valencia and Barcelona) disseminated along the Spanish coastline, provided by Puertos del Estado. To explore the atmospheric mechanisms responsible for the sign and magnitude of sea surges, a regional Eulerian approach (a synoptic typing) were combined with a larger-scale Lagrangian method, based on the analysis of storm-tracks over the Atlantic and local information (synop reports) obtained from the closest meteorological stations to the tide gauges. The synoptic catalogue was obtained following a procedure that combines Principal Component Analysis (PCA) for reduction purposes and clustering (Ward plus K-means) to define the circulation types. Sea level pressure, surface 10m U and V wind components gridded data were obtained from NCEP Reanalysis, while storm tracks and cyclone statistics were extracted from the CDC Map Room Climate Products Storm Track Data (http://www.cdc.noaa.gov/map/clim/st_data.html). The second task was to evaluate the performance of each circulation type on the spatial patterns of a daily fire danger risk index (Canadian Fire Weather Index, FWI). Finally, anomaly maps of several surface and low level climate variables, corresponding to the dates of ignition of the very large forest fires within each synoptic pattern, were calculated to provide insight of the specific conditions associated to those extreme events. A principal component analysis upon 6 hourly residuals highlighted the homogeneous behaviour of the tide gauges and provided a regional quantitative index to identify the largest storm surges. The leading PCA displayed a homogeneous spatial pattern, describing the low frequency variability along the entire coast, in spite of different orientations of the coast, accounting for more than 80% of the total variability. The second PCA displayed opposite phases between the Atlantic and the Mediterranean. Furthermore, the results suggest that surges are a regional rather than local phenomenon, probably related to the same single physical forcing. The comparison between extreme surge events and circulation patterns highlighted that single physical mechanism is represented by extratropical cyclonic disturbances located at the north-western corner of the Iberian Peninsula, responsible for an environment characterized by low pressure readings and westerly-southwesterly winds. That wind pattern acquires an onshore component in the Atlantic coast, but becomes offshore in the Mediterranean. So, the main mechanism responsible for those storm surges is the inverse barometer effect, being the wind dragging secondary. The main physical forcing of the storm surges, the extratropical cyclones, have experience a reduction of this frequency and a marked reduction in their strength since 1950, replaced by stable circulations. Both conditions suggest a long term reduction of the frequency and the magnitude of storm surges.

Circulating MicroRNA-122 Is Associated With the Risk of New-Onset Metabolic Syndrome and Type 2 Diabetes

PubMed Central

Skroblin, Philipp; Moschen, Alexander R.; Yin, Xiaoke; Kaudewitz, Dorothee; Zampetaki, Anna; Barwari, Temo; Whitehead, Meredith; Ramírez, Cristina M.; Goedeke, Leigh; Rotllan, Noemi; Bonora, Enzo; Hughes, Alun D.; Santer, Peter; Fernández-Hernando, Carlos; Tilg, Herbert; Willeit, Johann; Kiechl, Stefan

2017-01-01

MicroRNA-122 (miR-122) is abundant in the liver and involved in lipid homeostasis, but its relevance to the long-term risk of developing metabolic disorders is unknown. We therefore measured circulating miR-122 in the prospective population-based Bruneck Study (n = 810; survey year 1995). Circulating miR-122 was associated with prevalent insulin resistance, obesity, metabolic syndrome, type 2 diabetes, and an adverse lipid profile. Among 92 plasma proteins and 135 lipid subspecies quantified with mass spectrometry, it correlated inversely with zinc-α-2-glycoprotein and positively with afamin, complement factor H, VLDL-associated apolipoproteins, and lipid subspecies containing monounsaturated and saturated fatty acids. Proteomics analysis of livers from antagomiR-122–treated mice revealed novel regulators of hepatic lipid metabolism that are responsive to miR-122 inhibition. In the Anglo-Scandinavian Cardiac Outcomes Trial (ASCOT, n = 155), 12-month atorvastatin reduced circulating miR-122. A similar response to atorvastatin was observed in mice and cultured murine hepatocytes. Over up to 15 years of follow-up in the Bruneck Study, multivariable adjusted risk ratios per one-SD higher log miR-122 were 1.60 (95% CI 1.30–1.96; P < 0.001) for metabolic syndrome and 1.37 (1.03–1.82; P = 0.021) for type 2 diabetes. In conclusion, circulating miR-122 is strongly associated with the risk of developing metabolic syndrome and type 2 diabetes in the general population. PMID:27899485

46 CFR 151.10-1 - Barge hull classifications.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 5 2011-10-01 2011-10-01 false Barge hull classifications. 151.10-1 Section 151.10-1... classifications. (a) Each barge constructed or converted in conformance with this subpart shall be assigned a hull... the hull type classification for the service for which they were originally approved. Changes in...

46 CFR 76.50-5 - Classification.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 3 2011-10-01 2011-10-01 false Classification. 76.50-5 Section 76.50-5 Shipping COAST... Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing systems shall be... extinguishing systems are set forth in table 76.50-5(c). Table 76.50-5(c) Classification Type Size Soda acid and...

46 CFR 95.50-5 - Classification.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 4 2011-10-01 2011-10-01 false Classification. 95.50-5 Section 95.50-5 Shipping COAST... Details § 95.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing... extinguishing systems are set forth in Table 95.50-5(c). Table 95.50-5(c) Classification Type Size Soda-acid and...

46 CFR 193.50-5 - Classification.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 7 2010-10-01 2010-10-01 false Classification. 193.50-5 Section 193.50-5 Shipping COAST... Details § 193.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire...) Classification Type Size Soda-acid and water, gals. Foam, gals. Carbon dioxide, lbs. Dry chemical, lbs. A II 21/2...

46 CFR 193.50-5 - Classification.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 7 2011-10-01 2011-10-01 false Classification. 193.50-5 Section 193.50-5 Shipping COAST... Details § 193.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire...) Classification Type Size Soda-acid and water, gals. Foam, gals. Carbon dioxide, lbs. Dry chemical, lbs. A II 21/2...

46 CFR 76.50-5 - Classification.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 3 2010-10-01 2010-10-01 false Classification. 76.50-5 Section 76.50-5 Shipping COAST... Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing systems shall be... extinguishing systems are set forth in table 76.50-5(c). Table 76.50-5(c) Classification Type Size Soda acid and...

46 CFR 76.50-5 - Classification.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 3 2014-10-01 2014-10-01 false Classification. 76.50-5 Section 76.50-5 Shipping COAST... Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing systems shall be... extinguishing systems are set forth in table 76.50-5(c). Table 76.50-5(c) Classification Type Size Soda acid and...

46 CFR 193.50-5 - Classification.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 7 2012-10-01 2012-10-01 false Classification. 193.50-5 Section 193.50-5 Shipping COAST... Details § 193.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire...) Classification Type Size Soda-acid and water, gals. Foam, gals. Carbon dioxide, lbs. Dry chemical, lbs. A II 21/2...

46 CFR 95.50-5 - Classification.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 4 2012-10-01 2012-10-01 false Classification. 95.50-5 Section 95.50-5 Shipping COAST... Details § 95.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing... extinguishing systems are set forth in Table 95.50-5(c). Table 95.50-5(c) Classification Type Size Soda-acid and...

46 CFR 95.50-5 - Classification.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 4 2013-10-01 2013-10-01 false Classification. 95.50-5 Section 95.50-5 Shipping COAST... Details § 95.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing... extinguishing systems are set forth in Table 95.50-5(c). Table 95.50-5(c) Classification Type Size Soda-acid and...

46 CFR 76.50-5 - Classification.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 3 2013-10-01 2013-10-01 false Classification. 76.50-5 Section 76.50-5 Shipping COAST... Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing systems shall be... extinguishing systems are set forth in table 76.50-5(c). Table 76.50-5(c) Classification Type Size Soda acid and...

46 CFR 76.50-5 - Classification.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 3 2012-10-01 2012-10-01 false Classification. 76.50-5 Section 76.50-5 Shipping COAST... Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing systems shall be... extinguishing systems are set forth in table 76.50-5(c). Table 76.50-5(c) Classification Type Size Soda acid and...

46 CFR 193.50-5 - Classification.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 7 2013-10-01 2013-10-01 false Classification. 193.50-5 Section 193.50-5 Shipping COAST... Details § 193.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire...) Classification Type Size Soda-acid and water, gals. Foam, gals. Carbon dioxide, lbs. Dry chemical, lbs. A II 21/2...

46 CFR 193.50-5 - Classification.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 7 2014-10-01 2014-10-01 false Classification. 193.50-5 Section 193.50-5 Shipping COAST... Details § 193.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire...) Classification Type Size Soda-acid and water, gals. Foam, gals. Carbon dioxide, lbs. Dry chemical, lbs. A II 21/2...

46 CFR 95.50-5 - Classification.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 4 2014-10-01 2014-10-01 false Classification. 95.50-5 Section 95.50-5 Shipping COAST... Details § 95.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing... extinguishing systems are set forth in Table 95.50-5(c). Table 95.50-5(c) Classification Type Size Soda-acid and...

46 CFR 95.50-5 - Classification.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 4 2010-10-01 2010-10-01 false Classification. 95.50-5 Section 95.50-5 Shipping COAST... Details § 95.50-5 Classification. (a) Hand portable fire extinguishers and semiportable fire extinguishing... extinguishing systems are set forth in Table 95.50-5(c). Table 95.50-5(c) Classification Type Size Soda-acid and...

7 CFR 30.1 - Definitions of terms used in classification of leaf tobacco.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 2 2010-01-01 2010-01-01 false Definitions of terms used in classification of leaf... STANDARD CONTAINER REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.1 Definitions of terms used in classification of leaf tobacco. For the...

7 CFR 30.1 - Definitions of terms used in classification of leaf tobacco.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 2 2014-01-01 2014-01-01 false Definitions of terms used in classification of leaf... STANDARD CONTAINER REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.1 Definitions of terms used in classification of leaf tobacco. For the...

7 CFR 30.1 - Definitions of terms used in classification of leaf tobacco.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 2 2011-01-01 2011-01-01 false Definitions of terms used in classification of leaf... STANDARD CONTAINER REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.1 Definitions of terms used in classification of leaf tobacco. For the...

7 CFR 30.1 - Definitions of terms used in classification of leaf tobacco.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 2 2013-01-01 2013-01-01 false Definitions of terms used in classification of leaf... STANDARD CONTAINER REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.1 Definitions of terms used in classification of leaf tobacco. For the...

7 CFR 30.1 - Definitions of terms used in classification of leaf tobacco.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 2 2012-01-01 2012-01-01 false Definitions of terms used in classification of leaf... STANDARD CONTAINER REGULATIONS TOBACCO STOCKS AND STANDARDS Classification of Leaf Tobacco Covering Classes, Types and Groups of Grades § 30.1 Definitions of terms used in classification of leaf tobacco. For the...

Lauren classification and individualized chemotherapy in gastric cancer.

PubMed

Ma, Junli; Shen, Hong; Kapesa, Linda; Zeng, Shan

2016-05-01

Gastric cancer is one of the most common malignancies worldwide. During the last 50 years, the histological classification of gastric carcinoma has been largely based on Lauren's criteria, in which gastric cancer is classified into two major histological subtypes, namely intestinal type and diffuse type adenocarcinoma. This classification was introduced in 1965, and remains currently widely accepted and employed, since it constitutes a simple and robust classification approach. The two histological subtypes of gastric cancer proposed by the Lauren classification exhibit a number of distinct clinical and molecular characteristics, including histogenesis, cell differentiation, epidemiology, etiology, carcinogenesis, biological behaviors and prognosis. Gastric cancer exhibits varied sensitivity to chemotherapy drugs and significant heterogeneity; therefore, the disease may be a target for individualized therapy. The Lauren classification may provide the basis for individualized treatment for advanced gastric cancer, which is increasingly gaining attention in the scientific field. However, few studies have investigated individualized treatment that is guided by pathological classification. The aim of the current review is to analyze the two major histological subtypes of gastric cancer, as proposed by the Lauren classification, and to discuss the implications of this for personalized chemotherapy.

Lossless Compression of Classification-Map Data

NASA Technical Reports Server (NTRS)

Hua, Xie; Klimesh, Matthew

2009-01-01

A lossless image-data-compression algorithm intended specifically for application to classification-map data is based on prediction, context modeling, and entropy coding. The algorithm was formulated, in consideration of the differences between classification maps and ordinary images of natural scenes, so as to be capable of compressing classification- map data more effectively than do general-purpose image-data-compression algorithms. Classification maps are typically generated from remote-sensing images acquired by instruments aboard aircraft (see figure) and spacecraft. A classification map is a synthetic image that summarizes information derived from one or more original remote-sensing image(s) of a scene. The value assigned to each pixel in such a map is the index of a class that represents some type of content deduced from the original image data for example, a type of vegetation, a mineral, or a body of water at the corresponding location in the scene. When classification maps are generated onboard the aircraft or spacecraft, it is desirable to compress the classification-map data in order to reduce the volume of data that must be transmitted to a ground station.

LANDSAT applications to wetlands classification in the upper Mississippi River Valley. Ph.D. Thesis. Final Report

NASA Technical Reports Server (NTRS)

Lillesand, T. M.; Werth, L. F. (Principal Investigator)

1980-01-01

A 25% improvement in average classification accuracy was realized by processing double-date vs. single-date data. Under the spectrally and spatially complex site conditions characterizing the geographical area used, further improvement in wetland classification accuracy is apparently precluded by the spectral and spatial resolution restrictions of the LANDSAT MSS. Full scene analysis of scanning densitometer data extracted from scale infrared photography failed to permit discrimination of many wetland and nonwetland cover types. When classification of photographic data was limited to wetland areas only, much more detailed and accurate classification could be made. The integration of conventional image interpretation (to simply delineate wetland boundaries) and machine assisted classification (to discriminate among cover types present within the wetland areas) appears to warrant further research to study the feasibility and cost of extending this methodology over a large area using LANDSAT and/or small scale photography.

An automatic taxonomy of galaxy morphology using unsupervised machine learning

NASA Astrophysics Data System (ADS)

Hocking, Alex; Geach, James E.; Sun, Yi; Davey, Neil

2018-01-01

We present an unsupervised machine learning technique that automatically segments and labels galaxies in astronomical imaging surveys using only pixel data. Distinct from previous unsupervised machine learning approaches used in astronomy we use no pre-selection or pre-filtering of target galaxy type to identify galaxies that are similar. We demonstrate the technique on the Hubble Space Telescope (HST) Frontier Fields. By training the algorithm using galaxies from one field (Abell 2744) and applying the result to another (MACS 0416.1-2403), we show how the algorithm can cleanly separate early and late type galaxies without any form of pre-directed training for what an 'early' or 'late' type galaxy is. We then apply the technique to the HST Cosmic Assembly Near-infrared Deep Extragalactic Legacy Survey (CANDELS) fields, creating a catalogue of approximately 60 000 classifications. We show how the automatic classification groups galaxies of similar morphological (and photometric) type and make the classifications public via a catalogue, a visual catalogue and galaxy similarity search. We compare the CANDELS machine-based classifications to human-classifications from the Galaxy Zoo: CANDELS project. Although there is not a direct mapping between Galaxy Zoo and our hierarchical labelling, we demonstrate a good level of concordance between human and machine classifications. Finally, we show how the technique can be used to identify rarer objects and present lensed galaxy candidates from the CANDELS imaging.

Accuracy of circulating histones in predicting persistent organ failure and mortality in patients with acute pancreatitis.

PubMed

Liu, T; Huang, W; Szatmary, P; Abrams, S T; Alhamdi, Y; Lin, Z; Greenhalf, W; Wang, G; Sutton, R; Toh, C H

2017-08-01

Early prediction of acute pancreatitis severity remains a challenge. Circulating levels of histones are raised early in mouse models and correlate with disease severity. It was hypothesized that circulating histones predict persistent organ failure in patients with acute pancreatitis. Consecutive patients with acute pancreatitis fulfilling inclusion criteria admitted to Royal Liverpool University Hospital were enrolled prospectively between June 2010 and March 2014. Blood samples were obtained within 48 h of abdominal pain onset and relevant clinical data during the hospital stay were collected. Healthy volunteers were enrolled as controls. The primary endpoint was occurrence of persistent organ failure. The predictive values of circulating histones, clinical scores and other biomarkers were determined. Among 236 patients with acute pancreatitis, there were 156 (66·1 per cent), 57 (24·2 per cent) and 23 (9·7 per cent) with mild, moderate and severe disease respectively, according to the revised Atlanta classification. Forty-seven healthy volunteers were included. The area under the receiver operating characteristic (ROC) curve (AUC) for circulating histones in predicting persistent organ failure and mortality was 0·92 (95 per cent c.i. 0·85 to 0·99) and 0·96 (0·92 to 1·00) respectively; histones were at least as accurate as clinical scores or biochemical markers. For infected pancreatic necrosis and/or sepsis, the AUC was 0·78 (0·62 to 0·94). Histones did not predict or correlate with local pancreatic complications, but correlated negatively with leucocyte cell viability (r = -0·511, P = 0·001). Quantitative assessment of circulating histones in plasma within 48 h of abdominal pain onset can predict persistent organ failure and mortality in patients with acute pancreatitis. Early death of immune cells may contribute to raised circulating histone levels in acute pancreatitis. © 2017 The Authors. BJS published by John Wiley & Sons Ltd on behalf of BJS Society Ltd.

The Impact of Multiple Types of Child Maltreatment on Subsequent Risk Behaviors among Women during the Transition from Adolescence to Young Adulthood

ERIC Educational Resources Information Center

Hahm, Hyeouk Chris; Lee, Yoona; Ozonoff, Al; Van Wert, Michael J.

2010-01-01

The purpose of this study was to investigate how different types of child maltreatment, independently and collectively, impact a wide range of risk behaviors that fall into three domains: sexual risk behaviors, delinquency, and suicidality. Cumulative classification and Expanded Hierarchical Type (EHT) classification approaches were used to…

Improving galaxy morphologies for SDSS with Deep Learning

NASA Astrophysics Data System (ADS)

Domínguez Sánchez, H.; Huertas-Company, M.; Bernardi, M.; Tuccillo, D.; Fischer, J. L.

2018-05-01

We present a morphological catalogue for ˜670 000 galaxies in the Sloan Digital Sky Survey in two flavours: T-type, related to the Hubble sequence, and Galaxy Zoo 2 (GZ2 hereafter) classification scheme. By combining accurate existing visual classification catalogues with machine learning, we provide the largest and most accurate morphological catalogue up to date. The classifications are obtained with Deep Learning algorithms using Convolutional Neural Networks (CNNs). We use two visual classification catalogues, GZ2 and Nair & Abraham (2010), for training CNNs with colour images in order to obtain T-types and a series of GZ2 type questions (disc/features, edge-on galaxies, bar signature, bulge prominence, roundness, and mergers). We also provide an additional probability enabling a separation between pure elliptical (E) from S0, where the T-type model is not so efficient. For the T-type, our results show smaller offset and scatter than previous models trained with support vector machines. For the GZ2 type questions, our models have large accuracy (>97 per cent), precision and recall values (>90 per cent), when applied to a test sample with the same characteristics as the one used for training. The catalogue is publicly released with the paper.

An AERONET-Based Aerosol Classification Using the Mahalanobis Distance

NASA Technical Reports Server (NTRS)

Hamill, Patrick; Giordano, Marco; Ward, Carolyne; Giles, David; Holben, Brent

2016-01-01

We present an aerosol classification based on AERONET aerosol data from 1993 to 2012. We used the AERONET Level 2.0 almucantar aerosol retrieval products to define several reference aerosol clusters which are characteristic of the following general aerosol types: Urban-Industrial, Biomass Burning, Mixed Aerosol, Dust, and Maritime. The classification of a particular aerosol observation as one of these aerosol types is determined by its five-dimensional Mahalanobis distance to each reference cluster. We have calculated the fractional aerosol type distribution at 190 AERONET sites, as well as the monthly variation in aerosol type at those locations. The results are presented on a global map and individually in the supplementary material. Our aerosol typing is based on recognizing that different geographic regions exhibit characteristic aerosol types. To generate reference clusters we only keep data points that lie within a Mahalanobis distance of 2 from the centroid. Our aerosol characterization is based on the AERONET retrieved quantities, therefore it does not include low optical depth values. The analysis is based on point sources (the AERONET sites) rather than globally distributed values. The classifications obtained will be useful in interpreting aerosol retrievals from satellite borne instruments.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mainzer, A.; Masiero, J.; Bauer, J.

We have combined the NEOWISE and Sloan Digital Sky Survey data to study the albedos of 24,353 asteroids with candidate taxonomic classifications derived using Sloan photometry. We find a wide range of moderate to high albedos for candidate S-type asteroids that are analogous to the S complex defined by previous spectrophotometrically based taxonomic systems. The candidate C-type asteroids, while generally very dark, have a tail of higher albedos that overlaps the S types. The albedo distribution for asteroids with a photometrically derived Q classification is extremely similar to those of the S types. Asteroids with similar colors to (4) Vestamore » have higher albedos than the S types, and most have orbital elements similar to known Vesta family members. Finally, we show that the relative reflectance at 3.4 and 4.6 {mu}m is higher for D-type asteroids and suggest that their red visible and near-infrared spectral slope extends out to these wavelengths. Understanding the relationship between size, albedo, and taxonomic classification is complicated by the fact that the objects with classifications were selected from the visible/near-infrared Sloan Moving Object Catalog, which is biased against fainter asteroids, including those with lower albedos.« less

An updated evolutionary classification of CRISPR–Cas systems

PubMed Central

Makarova, Kira S.; Wolf, Yuri I.; Alkhnbashi, Omer S.; Costa, Fabrizio; Shah, Shiraz A.; Saunders, Sita J.; Barrangou, Rodolphe; Brouns, Stan J. J.; Charpentier, Emmanuelle; Haft, Daniel H.; Horvath, Philippe; Moineau, Sylvain; Mojica, Francisco J. M.; Terns, Rebecca M.; Terns, Michael P.; White, Malcolm F.; Yakunin, Alexander F.; Garrett, Roger A.; van der Oost, John; Backofen, Rolf; Koonin, Eugene V.

2017-01-01

The evolution of CRISPR–cas loci, which encode adaptive immune systems in archaea and bacteria, involves rapid changes, in particular numerous rearrangements of the locus architecture and horizontal transfer of complete loci or individual modules. These dynamics complicate straightforward phylogenetic classification, but here we present an approach combining the analysis of signature protein families and features of the architecture of cas loci that unambiguously partitions most CRISPR–cas loci into distinct classes, types and subtypes. The new classification retains the overall structure of the previous version but is expanded to now encompass two classes, five types and 16 subtypes. The relative stability of the classification suggests that the most prevalent variants of CRISPR–Cas systems are already known. However, the existence of rare, currently unclassifiable variants implies that additional types and subtypes remain to be characterized. PMID:26411297

Application of classical thermodynamic principles to the study of oceanic overturning circulation

NASA Astrophysics Data System (ADS)

Gade, Herman G.; Gustafsson, Karin E.

2004-08-01

Stationary deep-reaching overturning circulation in the ocean is studied by means of classical thermodynamic methods employing closed cycles in pV-space (p, pressure; V, volume). From observed (or computed) density fields, the pV-method may be used to infer the power required for driving a circulation with a given mass flux, or, if the available power is known, the resulting mass flux of the circulation may be assessed. Here, the circulation is assumed to be driven by diapycnal mixing caused by internal disturbances of meteorological and tidal origin and from transfer of geothermal heat through the ocean bottom. The analysis is developed on the basis that potential energy produced by any of these mechanisms is available for driving a circulation of the water masses above its level of generation. The method also takes into account secondary generated potential energy resulting from turbulence developed by the ensuing circulation.Models for different types of circulation are developed and applied to four types of hemispheric circulation with deep-water formation, convection and sinking in an idealized North Atlantic. Our calculations show that the energy input must exceed 15 J kg1 for a cycle to the bottom to exist. An energy supply of 2 TW would in that case support a constant vertical mass flux of 3.2 G kg s1 (3.1 Sv). Computed mass fluxes reaching the surface in the subtropics, corresponding to the same energy input, range between 2.3 5.2 G kg s1, depending on the type of convection/sinking involved. Much higher flux values ensue with ascending water masses reaching the surface at higher geographical latitudes.The study reveals also that compressibility of sea water does not enhance the circulation. An incompressible system, operating within the same mass flux and temperature range, would require about 25% less energy supply, provided that the circulation comprises the same water masses. It is furthermore shown that the meridional distribution of surface salinity, with higher values in the tropics and lower values in regions of deep-water formation, actually enhances the circulation in comparison with one of a more uniform surface salinity. With a homohaline North Atlantic, operating within the same temperature range as presently observed, an increase of 66% of power supply would be required in order that the mass flux of the overturning circulation should remain the same.

The vegetation of the Grand River/Cedar River, Sioux, and Ashland Districts of the Custer National Forest: a habitat type classification.

Treesearch

Paul L. Hansen; George R. Hoffman

1988-01-01

A vegetation classification was developed, using the methods and concepts of Daubenmire, on the Ashland, Sioux, and Grand River/Cedar River Districts of the Custer National Forest. Of the 26 habitat types delimited and described, eight were steppe, nine shrub-steppe, four woodland, and five forest. Two community types also were described. A key to the habitat types and...

Using methods from the data mining and machine learning literature for disease classification and prediction: A case study examining classification of heart failure sub-types

PubMed Central

Austin, Peter C.; Tu, Jack V.; Ho, Jennifer E.; Levy, Daniel; Lee, Douglas S.

2014-01-01

Objective Physicians classify patients into those with or without a specific disease. Furthermore, there is often interest in classifying patients according to disease etiology or subtype. Classification trees are frequently used to classify patients according to the presence or absence of a disease. However, classification trees can suffer from limited accuracy. In the data-mining and machine learning literature, alternate classification schemes have been developed. These include bootstrap aggregation (bagging), boosting, random forests, and support vector machines. Study design and Setting We compared the performance of these classification methods with those of conventional classification trees to classify patients with heart failure according to the following sub-types: heart failure with preserved ejection fraction (HFPEF) vs. heart failure with reduced ejection fraction (HFREF). We also compared the ability of these methods to predict the probability of the presence of HFPEF with that of conventional logistic regression. Results We found that modern, flexible tree-based methods from the data mining literature offer substantial improvement in prediction and classification of heart failure sub-type compared to conventional classification and regression trees. However, conventional logistic regression had superior performance for predicting the probability of the presence of HFPEF compared to the methods proposed in the data mining literature. Conclusion The use of tree-based methods offers superior performance over conventional classification and regression trees for predicting and classifying heart failure subtypes in a population-based sample of patients from Ontario. However, these methods do not offer substantial improvements over logistic regression for predicting the presence of HFPEF. PMID:23384592

Question analysis for Indonesian comparative question

NASA Astrophysics Data System (ADS)

Saelan, A.; Purwarianti, A.; Widyantoro, D. H.

2017-01-01

Information seeking is one of human needs today. Comparing things using search engine surely take more times than search only one thing. In this paper, we analyzed comparative questions for comparative question answering system. Comparative question is a question that comparing two or more entities. We grouped comparative questions into 5 types: selection between mentioned entities, selection between unmentioned entities, selection between any entity, comparison, and yes or no question. Then we extracted 4 types of information from comparative questions: entity, aspect, comparison, and constraint. We built classifiers for classification task and information extraction task. Features used for classification task are bag of words, whether for information extraction, we used lexical, 2 previous and following words lexical, and previous label as features. We tried 2 scenarios: classification first and extraction first. For classification first, we used classification result as a feature for extraction. Otherwise, for extraction first, we used extraction result as features for classification. We found that the result would be better if we do extraction first before classification. For the extraction task, classification using SMO gave the best result (88.78%), while for classification, it is better to use naïve bayes (82.35%).

Combining dispersion modelling with synoptic patterns to understand the wind-borne transport into the UK of the bluetongue disease vector

NASA Astrophysics Data System (ADS)

Burgin, Laura; Ekström, Marie; Dessai, Suraje

2017-07-01

Bluetongue, an economically important animal disease, can be spread over long distances by carriage of insect vectors ( Culicoides biting midges) on the wind. The weather conditions which influence the midge's flight are controlled by synoptic scale atmospheric circulations. A method is proposed that links wind-borne dispersion of the insects to synoptic circulation through the use of a dispersion model in combination with principal component analysis (PCA) and cluster analysis. We illustrate how to identify the main synoptic situations present during times of midge incursions into the UK from the European continent. A PCA was conducted on high-pass-filtered mean sea-level pressure data for a domain centred over north-west Europe from 2005 to 2007. A clustering algorithm applied to the PCA scores indicated the data should be divided into five classes for which averages were calculated, providing a classification of the main synoptic types present. Midge incursion events were found to mainly occur in two synoptic categories; 64.8% were associated with a pattern displaying a pressure gradient over the North Atlantic leading to moderate south-westerly flow over the UK and 17.9% of the events occurred when high pressure dominated the region leading to south-easterly or easterly winds. The winds indicated by the pressure maps generally compared well against observations from a surface station and analysis charts. This technique could be used to assess frequency and timings of incursions of virus into new areas on seasonal and decadal timescales, currently not possible with other dispersion or biological modelling methods.

Employment characteristics of a complex adult congenital heart disease cohort.

PubMed

Pickup, L; Gaffey, T; Clift, P; Bowater, S; Thorne, S; Hudsmith, L

2017-08-01

Due to advances in surgical techniques and subsequent management, there have been remarkable improvements in the survival of patients with congenital heart disease. In particular, larger numbers of patients with complex disease are now living into adulthood and are entering the workforce. To establish the types of employment complex adult congenital heart disease (ACHD) patients are engaged in, based on the largest cohort of patients with a single-ventricle circulation in the UK. Records of all patients with a univentricular (Fontan) circulation at the Queen Elizabeth Hospital were reviewed. Employment status was categorized according to the Standard Occupational Classification criteria (2010). A total of 210 patient records were reviewed. There was the same proportion of professionals in our cohort compared to the rest of the UK (20% versus 20%). There were greater proportions working in the caring, leisure and other service occupations (15% versus 9%), the elementary occupations (17% versus 11%), sales and customer service occupations (14% versus 8%) and administrative and secretarial occupations (12% versus 11%). The reverse trend was observed for associate professions and technical occupations (7% versus 14%), skilled trades (10% versus 11%), process, plant and machine operatives (3% versus 6%) and managers, directors and senior officials (2% versus 10%). The data show that ACHD patients with a single ventricle are engaged in a diverse range of occupations. It is essential that early education and employment advice are given to this cohort to maximize future employment potential. © The Author 2017. Published by Oxford University Press on behalf of the Society of Occupational Medicine. All rights reserved. For Permissions, please email: journals.permissions@oup.com

Bolivian satellite technology program on ERTS natural resources

NASA Technical Reports Server (NTRS)

Brockmann, H. C. (Principal Investigator); Bartoluccic C., L.; Hoffer, R. M.; Levandowski, D. W.; Ugarte, I.; Valenzuela, R. R.; Urena E., M.; Oros, R.

1977-01-01

The author has identified the following significant results. Application of digital classification for mapping land use permitted the separation of units at more specific levels in less time. A correct classification of data in the computer has a positive effect on the accuracy of the final products. Land use unit comparison with types of soils as represented by the colors of the coded map showed a class relation. Soil types in relation to land cover and land use demonstrated that vegetation was a positive factor in soils classification. Groupings of image resolution elements (pixels) permit studies of land use at different levels, thereby forming parameters for the classification of soils.

Real-time classification of vehicles by type within infrared imagery

NASA Astrophysics Data System (ADS)

Kundegorski, Mikolaj E.; Akçay, Samet; Payen de La Garanderie, Grégoire; Breckon, Toby P.

2016-10-01

Real-time classification of vehicles into sub-category types poses a significant challenge within infra-red imagery due to the high levels of intra-class variation in thermal vehicle signatures caused by aspects of design, current operating duration and ambient thermal conditions. Despite these challenges, infra-red sensing offers significant generalized target object detection advantages in terms of all-weather operation and invariance to visual camouflage techniques. This work investigates the accuracy of a number of real-time object classification approaches for this task within the wider context of an existing initial object detection and tracking framework. Specifically we evaluate the use of traditional feature-driven bag of visual words and histogram of oriented gradient classification approaches against modern convolutional neural network architectures. Furthermore, we use classical photogrammetry, within the context of current target detection and classification techniques, as a means of approximating 3D target position within the scene based on this vehicle type classification. Based on photogrammetric estimation of target position, we then illustrate the use of regular Kalman filter based tracking operating on actual 3D vehicle trajectories. Results are presented using a conventional thermal-band infra-red (IR) sensor arrangement where targets are tracked over a range of evaluation scenarios.

Monograph use at an academic health sciences library: the first three years of shelf life

PubMed Central

Blecic, Deborah D.

2000-01-01

Objective: To study the circulation of monographs during the first three years of shelf life at an academic health sciences library. Method: A record was kept of monographs added to the circulating collection from mid-1994 to mid-1995. After three years, each monograph was located and the number of times it circulated during the first, second, and third year of shelf life determined by counting checkout stamps on the circulation slip. Results: Of the 1,958 monographs studied, 1,674 had complete data for the first three years of shelf life. Of those 1,674 titles, 81.48% circulated at least once. A total of 7,659 circulations were recorded; 38.69% occurred in the first year of shelf life, 32.37% in the second year, and 28.95% in the third year. The data did not fit the well-known 80/20 rule. Instead, approximately 38% of monographs accounted for 80% of circulation. A small percentage, 2.21%, of monographs accounted for a substantial percentage of circulation, 21.84%. Conclusions: A large percentage of the monographs circulated and use did not decline sharply with age within the first three years of shelf life, indicating a high demand for monographs at this academic health sciences library. These results, combined with the findings of earlier studies, suggested two possibilities. First, academic health sciences libraries might exhibit use of a higher percentage of monograph acquisitions than other types of libraries; or, second, a low monograph-to-user ratio might result in a higher percentage of monographs being used. Perhaps both factors contributed to the results found in this study. Further investigation would be needed to determine the extent to which library type and monograph-to-user ratio influenced monograph use. PMID:10783969

Extreme weather events in southern Germany - Climatological risk and development of a large-scale identification procedure

NASA Astrophysics Data System (ADS)

Matthies, A.; Leckebusch, G. C.; Rohlfing, G.; Ulbrich, U.

2009-04-01

Extreme weather events such as thunderstorms, hail and heavy rain or snowfall can pose a threat to human life and to considerable tangible assets. Yet there is a lack of knowledge about present day climatological risk and its economic effects, and its changes due to rising greenhouse gas concentrations. Therefore, parts of economy particularly sensitve to extreme weather events such as insurance companies and airports require regional risk-analyses, early warning and prediction systems to cope with such events. Such an attempt is made for southern Germany, in close cooperation with stakeholders. Comparing ERA40 and station data with impact records of Munich Re and Munich Airport, the 90th percentile was found to be a suitable threshold for extreme impact relevant precipitation events. Different methods for the classification of causing synoptic situations have been tested on ERA40 reanalyses. An objective scheme for the classification of Lamb's circulation weather types (CWT's) has proved to be most suitable for correct classification of the large-scale flow conditions. Certain CWT's have been turned out to be prone to heavy precipitation or on the other side to have a very low risk of such events. Other large-scale parameters are tested in connection with CWT's to find out a combination that has the highest skill to identify extreme precipitation events in climate model data (ECHAM5 and CLM). For example vorticity advection in 700 hPa shows good results, but assumes knowledge of regional orographic particularities. Therefore ongoing work is focused on additional testing of parameters that indicate deviations of a basic state of the atmosphere like the Eady Growth Rate or the newly developed Dynamic State Index. Evaluation results will be used to estimate the skill of the regional climate model CLM concerning the simulation of frequency and intensity of the extreme weather events. Data of the A1B scenario (2000-2050) will be examined for a possible climate change signal.

Assimilation of a knowledge base and physical models to reduce errors in passive-microwave classifications of sea ice

NASA Technical Reports Server (NTRS)

Maslanik, J. A.; Key, J.

1992-01-01

An expert system framework has been developed to classify sea ice types using satellite passive microwave data, an operational classification algorithm, spatial and temporal information, ice types estimated from a dynamic-thermodynamic model, output from a neural network that detects the onset of melt, and knowledge about season and region. The rule base imposes boundary conditions upon the ice classification, modifies parameters in the ice algorithm, determines a `confidence' measure for the classified data, and under certain conditions, replaces the algorithm output with model output. Results demonstrate the potential power of such a system for minimizing overall error in the classification and for providing non-expert data users with a means of assessing the usefulness of the classification results for their applications.

The Psychosomatic Disorders Pertaining to Dental Practice with Revised Working Type Classification

PubMed Central

2014-01-01

Psychosomatic disorders are defined as disorders characterized by physiological changes that originate partially from emotional factors. This article aims to discuss the psychosomatic disorders of the oral cavity with a revised working type classification. The author has added one more subset to the existing classification, i.e., disorders caused by altered perception of dentofacial form and function, which include body dysmorphic disorder. The author has also inserted delusional halitosis under the miscellaneous disorders classification of psychosomatic disorders and revised the already existing classification proposed for the psychosomatic disorders pertaining to dental practice. After the inclusion of the subset (disorders caused by altered perception of dentofacial form and function), the terminology "psychosomatic disorders of the oral cavity" is modified to "psychosomatic disorders pertaining to dental practice". PMID:24478896

The psychosomatic disorders pertaining to dental practice with revised working type classification.

PubMed

Shamim, Thorakkal

2014-01-01

Psychosomatic disorders are defined as disorders characterized by physiological changes that originate partially from emotional factors. This article aims to discuss the psychosomatic disorders of the oral cavity with a revised working type classification. The author has added one more subset to the existing classification, i.e., disorders caused by altered perception of dentofacial form and function, which include body dysmorphic disorder. The author has also inserted delusional halitosis under the miscellaneous disorders classification of psychosomatic disorders and revised the already existing classification proposed for the psychosomatic disorders pertaining to dental practice. After the inclusion of the subset (disorders caused by altered perception of dentofacial form and function), the terminology "psychosomatic disorders of the oral cavity" is modified to "psychosomatic disorders pertaining to dental practice".

Classification of nasolabial folds in Asians and the corresponding surgical approaches: By Shanghai 9th People's Hospital.

PubMed

Zhang, Lu; Tang, Meng-Yao; Jin, Rong; Zhang, Ying; Shi, Yao-Ming; Sun, Bao-Shan; Zhang, Yu-Guang

2015-07-01

One of the earliest signs of aging appears in the nasolabial fold, which is a special anatomical region that requires many factors for comprehensive assessment. Hence, it is inadequate to rely on a single index to facilitate the classification of nasolabial folds. Through clinical observation, we have observed that traditional filling treatments provide little improvement for some patients, which prompted us to seek a more specific and scientific classification standard and assessment system. A total of 900 patients who sought facial rejuvenation treatment in Shanghai 9th People's Hospital were invited in this study. We observed the different nasolabial fold traits for different age groups and in different states, and the results were compared with the Wrinkle Severity Rating Scale (WSRS). We summarized the data, presented a classification scheme, and proposed a selection of treatment options. Consideration of the anatomical and histological features of nasolabial folds allowed us to divide nasolabial folds into five types, namely the skin type, fat pad type, muscular type, bone retrusion type, and hybrid type. Because different types of nasolabial folds require different treatments, it is crucial to accurately assess and correctly classify the conditions. Copyright © 2015 British Association of Plastic, Reconstructive and Aesthetic Surgeons. Published by Elsevier Ltd. All rights reserved.

40 CFR 152.160 - Scope.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE REGISTRATION AND CLASSIFICATION PROCEDURES Classification of Pesticides § 152.160 Scope. (a) Types of classification. A pesticide product may be unclassified, or it may be classified for restricted use or for...

40 CFR 152.160 - Scope.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE REGISTRATION AND CLASSIFICATION PROCEDURES Classification of Pesticides § 152.160 Scope. (a) Types of classification. A pesticide product may be unclassified, or it may be classified for restricted use or for...

40 CFR 152.160 - Scope.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE REGISTRATION AND CLASSIFICATION PROCEDURES Classification of Pesticides § 152.160 Scope. (a) Types of classification. A pesticide product may be unclassified, or it may be classified for restricted use or for...

40 CFR 152.160 - Scope.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE REGISTRATION AND CLASSIFICATION PROCEDURES Classification of Pesticides § 152.160 Scope. (a) Types of classification. A pesticide product may be unclassified, or it may be classified for restricted use or for...

40 CFR 152.160 - Scope.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE REGISTRATION AND CLASSIFICATION PROCEDURES Classification of Pesticides § 152.160 Scope. (a) Types of classification. A pesticide product may be unclassified, or it may be classified for restricted use or for...

Multi-class biological tissue classification based on a multi-classifier: Preliminary study of an automatic output power control for ultrasonic surgical units.

PubMed

Youn, Su Hyun; Sim, Taeyong; Choi, Ahnryul; Song, Jinsung; Shin, Ki Young; Lee, Il Kwon; Heo, Hyun Mu; Lee, Daeweon; Mun, Joung Hwan

2015-06-01

Ultrasonic surgical units (USUs) have the advantage of minimizing tissue damage during surgeries that require tissue dissection by reducing problems such as coagulation and unwanted carbonization, but the disadvantage of requiring manual adjustment of power output according to the target tissue. In order to overcome this limitation, it is necessary to determine the properties of in vivo tissues automatically. We propose a multi-classifier that can accurately classify tissues based on the unique impedance of each tissue. For this purpose, a multi-classifier was built based on single classifiers with high classification rates, and the classification accuracy of the proposed model was compared with that of single classifiers for various electrode types (Type-I: 6 mm invasive; Type-II: 3 mm invasive; Type-III: surface). The sensitivity and positive predictive value (PPV) of the multi-classifier by cross checks were determined. According to the 10-fold cross validation results, the classification accuracy of the proposed model was significantly higher (p<0.05 or <0.01) than that of existing single classifiers for all electrode types. In particular, the classification accuracy of the proposed model was highest when the 3mm invasive electrode (Type-II) was used (sensitivity=97.33-100.00%; PPV=96.71-100.00%). The results of this study are an important contribution to achieving automatic optimal output power adjustment of USUs according to the properties of individual tissues. Copyright © 2015 Elsevier Ltd. All rights reserved.

Post-treatment glenoid classification system for total shoulder arthroplasty.

PubMed

Churchill, R Sean

2012-04-01

Over the past 10 years, numerous advancements in glenoid preparation and resurfacing have occurred. Current glenoid classification systems are either focused solely on the patient's preoperative glenoid bone configuration or on the available glenoid bone stock in revision arthroplasty cases. While these systems provide value in preoperative planning, they fail to properly classify the surgical reconstruction completed. A literature review of common bone preparation methods and sources of glenoid prosthetic failure was performed. Based upon this review, a classification system for grading the status of the glenoid after prosthetic implantation was developed. A 6 category, post-treatment, glenoid classification system is proposed: type 0: no reaming; type I: glenoid reaming into but not through the subchondral bone; type II: glenoid reaming which perforates through <50% of the subchondral bone surface area; type III: glenoid reaming which perforates through >50% of the subchondral bone surface area; type IV: use of structural bone graft; and type V: use of a posterior augmented glenoid prosthesis. Types I-III are further subdivided into subtype A which have 100% bone support of the prosthesis, and subtype B which have a region of unsupported prosthesis. The classification system proposed addresses the surgical management of the glenoid during prosthetic replacement. This unique approach to classifying the glenoid following surgical intervention will allow direct follow-up comparison of similarly treated glenoid replacements. Future multicenter studies, possibly through joint registry databases, could then determine the long-term efficacy of the various glenoid preparation methods. Copyright © 2012 Journal of Shoulder and Elbow Surgery Board of Trustees. Published by Mosby, Inc. All rights reserved.

A Study with Computer-Based Circulation Data of the Non-Use and Use of a Large Academic Library. Final Report.

ERIC Educational Resources Information Center

Lubans, John, Jr.; And Others

Computer-based circulation systems, it is widely believed, can be utilized to provide data for library use studies. The study described in this report involves using such a data base to analyze aspects of library use and non-use and types of users. Another major objective of this research was the testing of machine-readable circulation data…

Outcomes of early carotid stenting and angioplasty in large-vessel anterior circulation strokes treated with mechanical thrombectomy and intravenous thrombolytics.

PubMed

Mehta, T; Desai, N; Mehta, K; Parikh, R; Male, S; Hussain, M; Ollenschleger, M; Spiegel, G; Grande, A; Ezzeddine, M; Jagadeesan, B; Tummala, R; McCullough, L

2018-01-01

Introduction Proximal cervical internal carotid artery stenosis greater than 50% merits revascularization to mitigate the risk of stroke recurrence among large-vessel anterior circulation strokes undergoing mechanical thrombectomy. Carotid artery stenting necessitates the use of antiplatelets, and there is a theoretical increased risk of hemorrhagic transformation given that such patients may already have received intravenous thrombolytics and have a significant infarct burden. We investigate the outcomes of large-vessel anterior circulation stroke patients treated with intravenous thrombolytics receiving same-day carotid stenting or selective angioplasty compared to no carotid intervention. Materials and methods The study cohort was obtained from the National (Nationwide) Inpatient Sample database between 2006 and 2014, using International Statistical Classification of Diseases, ninth revision discharge diagnosis and procedure codes. A total of 11,825 patients with large-vessel anterior circulation stroke treated with intravenous thrombolytic and mechanical thrombectomy on the same day were identified. The study population was subdivided into three subgroups: no carotid intervention, same-day carotid angioplasty without carotid stenting, and same-day carotid stenting. Outcomes were assessed with respect to mortality, significant disability at discharge, hemorrhagic transformation, and requirement of percutaneous endoscopic gastronomy tube placement, prolonged mechanical ventilation, or craniotomy. Results This study found no statistically significant difference in patient outcomes in those treated with concurrent carotid stenting compared to no carotid intervention in terms of morbidity or mortality. Conclusions If indicated, it is reasonable to consider concurrent carotid stenting and/or angioplasty for large-vessel anterior circulation stroke patients treated with mechanical thrombectomy who also receive intravenous thrombolytics.

[Nursing care in fluorescein angiography].

PubMed

Santos-Blanco, Feliciano

2008-01-01

Fluoresceinic angiography of the ocular fundus is a diagnostic technique to study retinal and choroidal circulation. This technique consists of parenteral administration of 500 mg of sodium fluorescein 10% and photographing the fluorescence in the eye vessels. Although this substance is fairly safe, it may also produce mild, moderate or severe local and/or general adverse reactions. The nursing process is routinely used in hospital units but not always in outpatient clinics, even through the use of invasive procedures with intravenous medication administration is common. Therefore, nurses, as those reponsible for intravenous administration, should use the nursing process to guarantee the quality of care required by the patient. To do this, we describe an individualized care plan based on evaluation by Marjorie Gordon's functional health patterns, NANDA's nursing diagnoses Taxonomy II, Nursing Outcomes Classification (NOC), Nursing Interventions Classifications (NIC) and potential complications of the procedure.

On the role of snow cover ablation variability and synoptic-scale atmospheric forcings at the sub-basin scale within the Great Lakes watershed

NASA Astrophysics Data System (ADS)

Suriano, Zachary J.

2018-02-01

Synoptic-scale atmospheric conditions play a critical role in determining the frequency and intensity of snow cover ablation in the mid-latitudes. Using a synoptic classification technique, distinct regional circulation patterns influencing the Great Lakes basin of North America are identified and examined in conjunction with daily snow ablation events from 1960 to 2009. This approach allows for the influence of each synoptic weather type on ablation to be examined independently and for the monthly and inter-annual frequencies of the weather types to be tracked over time. Because of the spatial heterogeneity of snow cover and the relatively large geographic extent of the Great Lakes basin, snow cover ablation events and the synoptic-scale patterns that cause them are examined for each of the Great Lakes watershed's five primary sub-basins to understand the regional complexities of snow cover ablation variability. Results indicate that while many synoptic weather patterns lead to ablation across the basins, they can be generally grouped into one of only a few primary patterns: southerly flow, high-pressure overhead, and rain-on-snow patterns. As expected, the patterns leading to ablation are not necessarily consistent between the five sub-basins due to the seasonality of snow cover and the spatial variability of temperature, moisture, wind, and incoming solar radiation associated with the particular synoptic weather types. Significant trends in the inter-annual frequency of ablation-inducing synoptic types do exist for some sub-basins, indicating a potential change in the hydrologic impact of these patterns over time.

Terminology and classification of muscle injuries in sport: The Munich consensus statement

PubMed Central

Mueller-Wohlfahrt, Hans-Wilhelm; Haensel, Lutz; Mithoefer, Kai; Ekstrand, Jan; English, Bryan; McNally, Steven; Orchard, John; van Dijk, C Niek; Kerkhoffs, Gino M; Schamasch, Patrick; Blottner, Dieter; Swaerd, Leif; Goedhart, Edwin; Ueblacker, Peter

2013-01-01

Objective To provide a clear terminology and classification of muscle injuries in order to facilitate effective communication among medical practitioners and development of systematic treatment strategies. Methods Thirty native English-speaking scientists and team doctors of national and first division professional sports teams were asked to complete a questionnaire on muscle injuries to evaluate the currently used terminology of athletic muscle injury. In addition, a consensus meeting of international sports medicine experts was established to develop practical and scientific definitions of muscle injuries as well as a new and comprehensive classification system. Results The response rate of the survey was 63%. The responses confirmed the marked variability in the use of the terminology relating to muscle injury, with the most obvious inconsistencies for the term strain. In the consensus meeting, practical and systematic terms were defined and established. In addition, a new comprehensive classification system was developed, which differentiates between four types: functional muscle disorders (type 1: overexertion-related and type 2: neuromuscular muscle disorders) describing disorders without macroscopic evidence of fibre tear and structural muscle injuries (type 3: partial tears and type 4: (sub)total tears/tendinous avulsions) with macroscopic evidence of fibre tear, that is, structural damage. Subclassifications are presented for each type. Conclusions A consistent English terminology as well as a comprehensive classification system for athletic muscle injuries which is proven in the daily practice are presented. This will help to improve clarity of communication for diagnostic and therapeutic purposes and can serve as the basis for future comparative studies to address the continued lack of systematic information on muscle injuries in the literature. What are the new things Consensus definitions of the terminology which is used in the field of muscle injuries as well as a new comprehensive classification system which clearly defines types of athletic muscle injuries. Level of evidence Expert opinion, Level V. PMID:23080315

Fuel Type Classification and Fuel Loading in Central Interior, Korea: Uiseong-Gun

Treesearch

Myoung Soo Won; Kyo Sang Koo; Myung Bo Lee; Si Young Lee

2006-01-01

The objective of this study is classification of fuel type and calculation of fuel loading to assess forest fire hazard by fuel characteristics at Uiseong-gun, Gyeongbuk located in the central interior of Korea. A database was constructed of eight factors such as forest type and topography using ArcGIS 9.1 GIS programs. An on-site survey was conducted for investigating...

A new dynamical index for classification of cold surge types over East Asia

NASA Astrophysics Data System (ADS)

Park, Tae-Won; Ho, Chang-Hoi; Jeong, Jee-Hoon; Heo, Jin-Woo; Deng, Yi

2015-11-01

The cold surges over East Asia can be classified into wave-train type and blocking type according to their dynamic origins. In the present study, two dynamic indices are proposed to objectively identify cold surge types using potential temperature ( θ) on the dynamic tropopause at 2-potential vorticity units (2-PVU) surface. The two indices are designed to represent primary characteristics of the two types of cold surge. The wave-train index ( WI) is defined as a difference of anomalous θ on the 2-PVU surface between the western North Pacific and northeast China, which captures a southward (northward) intrusion of cold (warm) air mass related to the trough-ridge pattern. The blocking index ( BI) is defined as a difference of anomalous θ between the subarctic region and northeast China, which indicates air mass overturning related to a reversal of the usual meridional θ gradient commonly observed in the occurrence of blocking type cold surge. Composite analyses based on the distribution of the WI and BI clearly demonstrate the dynamic evolutions of corresponding cold surge types. The wave-train cold surge is associated with a southeastward expansion of the Siberian High and northerly wind near surface, which is caused by growing baroclinic waves. During the blocking cold surge, a geopotential height dipole indicating the subarctic blocking and deepening of East Asian coastal trough induces a southward expansion of the Siberian High and northeasterly wind. Compared to the wave-train type, the blocking cold surge exhibits a longer duration and stronger intensity. In the new framework of these dynamic indices, we can detect a third type of cold surge when both the wave-train and the blocking occur together. In addition, we can exclude the events that do not have the essential features of the upper tropospheric disturbances or the subarctic anticyclonic circulation, which are responsible for cold surge occurrence, using the new indices.

Detection of inter-patient left and right bundle branch block heartbeats in ECG using ensemble classifiers

PubMed Central

2014-01-01

Background Left bundle branch block (LBBB) and right bundle branch block (RBBB) not only mask electrocardiogram (ECG) changes that reflect diseases but also indicate important underlying pathology. The timely detection of LBBB and RBBB is critical in the treatment of cardiac diseases. Inter-patient heartbeat classification is based on independent training and testing sets to construct and evaluate a heartbeat classification system. Therefore, a heartbeat classification system with a high performance evaluation possesses a strong predictive capability for unknown data. The aim of this study was to propose a method for inter-patient classification of heartbeats to accurately detect LBBB and RBBB from the normal beat (NORM). Methods This study proposed a heartbeat classification method through a combination of three different types of classifiers: a minimum distance classifier constructed between NORM and LBBB; a weighted linear discriminant classifier between NORM and RBBB based on Bayesian decision making using posterior probabilities; and a linear support vector machine (SVM) between LBBB and RBBB. Each classifier was used with matching features to obtain better classification performance. The final types of the test heartbeats were determined using a majority voting strategy through the combination of class labels from the three classifiers. The optimal parameters for the classifiers were selected using cross-validation on the training set. The effects of different lead configurations on the classification results were assessed, and the performance of these three classifiers was compared for the detection of each pair of heartbeat types. Results The study results showed that a two-lead configuration exhibited better classification results compared with a single-lead configuration. The construction of a classifier with good performance between each pair of heartbeat types significantly improved the heartbeat classification performance. The results showed a sensitivity of 91.4% and a positive predictive value of 37.3% for LBBB and a sensitivity of 92.8% and a positive predictive value of 88.8% for RBBB. Conclusions A multi-classifier ensemble method was proposed based on inter-patient data and demonstrated a satisfactory classification performance. This approach has the potential for application in clinical practice to distinguish LBBB and RBBB from NORM of unknown patients. PMID:24903422

Detection of inter-patient left and right bundle branch block heartbeats in ECG using ensemble classifiers.

PubMed

Huang, Huifang; Liu, Jie; Zhu, Qiang; Wang, Ruiping; Hu, Guangshu

2014-06-05

Left bundle branch block (LBBB) and right bundle branch block (RBBB) not only mask electrocardiogram (ECG) changes that reflect diseases but also indicate important underlying pathology. The timely detection of LBBB and RBBB is critical in the treatment of cardiac diseases. Inter-patient heartbeat classification is based on independent training and testing sets to construct and evaluate a heartbeat classification system. Therefore, a heartbeat classification system with a high performance evaluation possesses a strong predictive capability for unknown data. The aim of this study was to propose a method for inter-patient classification of heartbeats to accurately detect LBBB and RBBB from the normal beat (NORM). This study proposed a heartbeat classification method through a combination of three different types of classifiers: a minimum distance classifier constructed between NORM and LBBB; a weighted linear discriminant classifier between NORM and RBBB based on Bayesian decision making using posterior probabilities; and a linear support vector machine (SVM) between LBBB and RBBB. Each classifier was used with matching features to obtain better classification performance. The final types of the test heartbeats were determined using a majority voting strategy through the combination of class labels from the three classifiers. The optimal parameters for the classifiers were selected using cross-validation on the training set. The effects of different lead configurations on the classification results were assessed, and the performance of these three classifiers was compared for the detection of each pair of heartbeat types. The study results showed that a two-lead configuration exhibited better classification results compared with a single-lead configuration. The construction of a classifier with good performance between each pair of heartbeat types significantly improved the heartbeat classification performance. The results showed a sensitivity of 91.4% and a positive predictive value of 37.3% for LBBB and a sensitivity of 92.8% and a positive predictive value of 88.8% for RBBB. A multi-classifier ensemble method was proposed based on inter-patient data and demonstrated a satisfactory classification performance. This approach has the potential for application in clinical practice to distinguish LBBB and RBBB from NORM of unknown patients.

An empirical comparison of different approaches for combining multimodal neuroimaging data with support vector machine

PubMed Central

Pettersson-Yeo, William; Benetti, Stefania; Marquand, Andre F.; Joules, Richard; Catani, Marco; Williams, Steve C. R.; Allen, Paul; McGuire, Philip; Mechelli, Andrea

2014-01-01

In the pursuit of clinical utility, neuroimaging researchers of psychiatric and neurological illness are increasingly using analyses, such as support vector machine, that allow inference at the single-subject level. Recent studies employing single-modality data, however, suggest that classification accuracies must be improved for such utility to be realized. One possible solution is to integrate different data types to provide a single combined output classification; either by generating a single decision function based on an integrated kernel matrix, or, by creating an ensemble of multiple single modality classifiers and integrating their predictions. Here, we describe four integrative approaches: (1) an un-weighted sum of kernels, (2) multi-kernel learning, (3) prediction averaging, and (4) majority voting, and compare their ability to enhance classification accuracy relative to the best single-modality classification accuracy. We achieve this by integrating structural, functional, and diffusion tensor magnetic resonance imaging data, in order to compare ultra-high risk (n = 19), first episode psychosis (n = 19) and healthy control subjects (n = 23). Our results show that (i) whilst integration can enhance classification accuracy by up to 13%, the frequency of such instances may be limited, (ii) where classification can be enhanced, simple methods may yield greater increases relative to more computationally complex alternatives, and, (iii) the potential for classification enhancement is highly influenced by the specific diagnostic comparison under consideration. In conclusion, our findings suggest that for moderately sized clinical neuroimaging datasets, combining different imaging modalities in a data-driven manner is no “magic bullet” for increasing classification accuracy. However, it remains possible that this conclusion is dependent on the use of neuroimaging modalities that had little, or no, complementary information to offer one another, and that the integration of more diverse types of data would have produced greater classification enhancement. We suggest that future studies ideally examine a greater variety of data types (e.g., genetic, cognitive, and neuroimaging) in order to identify the data types and combinations optimally suited to the classification of early stage psychosis. PMID:25076868

An empirical comparison of different approaches for combining multimodal neuroimaging data with support vector machine.

PubMed

Pettersson-Yeo, William; Benetti, Stefania; Marquand, Andre F; Joules, Richard; Catani, Marco; Williams, Steve C R; Allen, Paul; McGuire, Philip; Mechelli, Andrea

2014-01-01

In the pursuit of clinical utility, neuroimaging researchers of psychiatric and neurological illness are increasingly using analyses, such as support vector machine, that allow inference at the single-subject level. Recent studies employing single-modality data, however, suggest that classification accuracies must be improved for such utility to be realized. One possible solution is to integrate different data types to provide a single combined output classification; either by generating a single decision function based on an integrated kernel matrix, or, by creating an ensemble of multiple single modality classifiers and integrating their predictions. Here, we describe four integrative approaches: (1) an un-weighted sum of kernels, (2) multi-kernel learning, (3) prediction averaging, and (4) majority voting, and compare their ability to enhance classification accuracy relative to the best single-modality classification accuracy. We achieve this by integrating structural, functional, and diffusion tensor magnetic resonance imaging data, in order to compare ultra-high risk (n = 19), first episode psychosis (n = 19) and healthy control subjects (n = 23). Our results show that (i) whilst integration can enhance classification accuracy by up to 13%, the frequency of such instances may be limited, (ii) where classification can be enhanced, simple methods may yield greater increases relative to more computationally complex alternatives, and, (iii) the potential for classification enhancement is highly influenced by the specific diagnostic comparison under consideration. In conclusion, our findings suggest that for moderately sized clinical neuroimaging datasets, combining different imaging modalities in a data-driven manner is no "magic bullet" for increasing classification accuracy. However, it remains possible that this conclusion is dependent on the use of neuroimaging modalities that had little, or no, complementary information to offer one another, and that the integration of more diverse types of data would have produced greater classification enhancement. We suggest that future studies ideally examine a greater variety of data types (e.g., genetic, cognitive, and neuroimaging) in order to identify the data types and combinations optimally suited to the classification of early stage psychosis.

An unbalanced spectra classification method based on entropy

NASA Astrophysics Data System (ADS)

Liu, Zhong-bao; Zhao, Wen-juan

2017-05-01

How to solve the problem of distinguishing the minority spectra from the majority of the spectra is quite important in astronomy. In view of this, an unbalanced spectra classification method based on entropy (USCM) is proposed in this paper to deal with the unbalanced spectra classification problem. USCM greatly improves the performances of the traditional classifiers on distinguishing the minority spectra as it takes the data distribution into consideration in the process of classification. However, its time complexity is exponential with the training size, and therefore, it can only deal with the problem of small- and medium-scale classification. How to solve the large-scale classification problem is quite important to USCM. It can be easily obtained by mathematical computation that the dual form of USCM is equivalent to the minimum enclosing ball (MEB), and core vector machine (CVM) is introduced, USCM based on CVM is proposed to deal with the large-scale classification problem. Several comparative experiments on the 4 subclasses of K-type spectra, 3 subclasses of F-type spectra and 3 subclasses of G-type spectra from Sloan Digital Sky Survey (SDSS) verify USCM and USCM based on CVM perform better than kNN (k nearest neighbor) and SVM (support vector machine) in dealing with the problem of rare spectra mining respectively on the small- and medium-scale datasets and the large-scale datasets.

Human rotavirus vaccine Rotarix™ provides protection against diverse circulating rotavirus strains in African infants: a randomized controlled trial.

PubMed

Steele, Andrew Duncan; Neuzil, Kathleen M; Cunliffe, Nigel A; Madhi, Shabir A; Bos, Pieter; Ngwira, Bagrey; Witte, Desiree; Todd, Stacy; Louw, Cheryl; Kirsten, Mari; Aspinall, Sanet; Van Doorn, Leen Jan; Bouckenooghe, Alain; Suryakiran, Pemmaraju V; Han, Htay Htay

2012-09-13

Rotaviruses are the most important cause of severe acute gastroenteritis worldwide in children <5 years of age. The human, G1P[8] rotavirus vaccine Rotarix™ significantly reduced severe rotavirus gastroenteritis episodes in a Phase III clinical trial conducted in infants in South Africa and Malawi. This paper examines rotavirus vaccine efficacy in preventing severe rotavirus gastroenteritis, during infancy, caused by the various G and P rotavirus types encountered during the first rotavirus-season. Healthy infants aged 5-10 weeks were enrolled and randomized into three groups to receive either two (10 and 14 weeks) or three doses of Rotarix™ (together forming the pooled Rotarix™ group) or three doses of placebo at a 6,10,14-week schedule. Weekly home visits were conducted to identify gastroenteritis episodes. Rotaviruses were detected by ELISA and genotyped by RT-PCR and nucleotide sequencing. The percentage of infants with severe rotavirus gastroenteritis caused by the circulating G and P types from 2 weeks post-last dose until one year of age and the corresponding vaccine efficacy was calculated with 95% CI. Overall, 4939 infants were vaccinated and 4417 (pooled Rotarix™ = 2974; placebo = 1443) were included in the per protocol efficacy cohort. G1 wild-type was detected in 23 (1.6%) severe rotavirus gastroenteritis episodes from the placebo group. This was followed in order of detection by G12 (15 [1%] in placebo) and G8 types (15 [1%] in placebo). Vaccine efficacy against G1 wild-type, G12 and G8 types were 64.1% (95% CI: 29.9%; 82%), 51.5% (95% CI:-6.5%; 77.9%) and 64.4% (95% CI: 17.1%; 85.2%), respectively. Genotype P[8] was the predominant circulating P type and was detected in 38 (2.6%) severe rotavirus gastroenteritis cases in placebo group. The remaining circulating P types comprised of P[4] (20 [1.4%] in placebo) and P[6] (13 [0.9%] in placebo). Vaccine efficacy against P[8] was 59.1% (95% CI: 32.8%; 75.3%), P[4] was 70.9% (95% CI: 37.5%; 87.0%) and P[6] was 55.2% (95% CI: -6.5%; 81.3%) Rotarix™ vaccine demonstrated efficacy against severe gastroenteritis caused by diverse circulating rotavirus types. These data add to a growing body of evidence supporting heterotypic protection provided by Rotarix™. NCT00241644.

Type 2 diabetes mellitus coincident with pulmonary tuberculosis is associated with heightened systemic type 1, type 17, and other proinflammatory cytokines.

PubMed

Kumar, Nathella Pavan; Sridhar, Rathinam; Banurekha, Vaithilingam V; Jawahar, Mohideen S; Fay, Michael P; Nutman, Thomas B; Babu, Subash

2013-10-01

Type 2 diabetes mellitus is a major risk factor for the development of active tuberculosis, although the biological basis underlying this susceptibility remains poorly characterized. To identify the influence of coincident diabetes mellitus on cytokine levels in pulmonary tuberculosis, we examined circulating levels of a panel of cytokines and chemokines in the plasma of individuals with tuberculosis with diabetes and compared them with those of individuals without diabetes. Tuberculosis with diabetes is characterized by elevated circulating levels of type 1 (IFN-γ, tumor necrosis factor-α, and IL-2), type 2 (IL-5), and type 17 (IL-17A) cytokines but decreased circulating levels of IL-22. This was associated with increased systemic levels of other proinflammatory cytokines (IL-1β, IL-6, and IL-18) and an antiinflammatory cytokine (IL-10) but not type 1 IFNs. Moreover, tuberculosis antigen-stimulated whole blood also showed increased levels of proinflammatory cytokines. Finally, type 1 and type 17 cytokines in plasma exhibit a significant positive correlation with hemoglobin A1C levels, indicating that impaired control of diabetes is associated with this proinflammatory milieu. Multivariate analysis revealed that the association of proinflammatory cytokines with diabetes mellitus was not influenced by age, sex, or other metabolic parameters. Our data reveal that tuberculosis with diabetes is characterized by heightened cytokine responsiveness, indicating that chronic inflammation underlying type 2 diabetes potentially contributes to increased immune pathology and poor control in tuberculosis infection.

Coast redwood ecological types of southern Monterey County, California

Treesearch

Mark Borchert; Daniel Segotta; Michael D. Purser

1988-01-01

An ecological classification system has been developed for the Pacific Southwest Region of the Forest Service. As part of this classification effort, coast redwood (Sequoia sempervirens) forests of southern Monterey County in the Los Padres National Forest were classified into six ecological types using vegetation, soils and geomorphology taken from...

Enhancing Vocabulary Acquisition Through Reading: A Hierarchy of Text-Related Exercise Types.

ERIC Educational Resources Information Center

Paribakht, T. Sima; Wesche, Marjorie

1996-01-01

Presents a classification scheme for reading-related exercises advocated in English-as-a-Foreign-Language textbooks. The scheme proposes a hierarchy of the degree and type of mental processing required by various vocabulary exercises. The categories of classification are selective attention, recognition, manipulation, interpretation and…

9 CFR 146.43 - Terminology and classification; meat-type turkey slaughter plants.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; meat-type turkey slaughter plants. 146.43 Section 146.43 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE LIVESTOCK IMPROVEMENT NATIONAL POULTRY IMPROVEMENT PLAN FOR...

9 CFR 146.33 - Terminology and classification; meat-type chicken slaughter plants.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Terminology and classification; meat-type chicken slaughter plants. 146.33 Section 146.33 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE LIVESTOCK IMPROVEMENT NATIONAL POULTRY IMPROVEMENT...

Annual crop type classification of the U.S. Great Plains for 2000 to 2011

USGS Publications Warehouse

Howard, Daniel M.; Wylie, Bruce K.

2014-01-01

The purpose of this study was to increase the spatial and temporal availability of crop classification data. In this study, nearly 16.2 million crop observation points were used in the training of the US Great Plains classification tree crop type model (CTM). Each observation point was further defined by weekly Normalized Difference Vegetation Index, annual climate, and a number of other biogeophysical environmental characteristics. This study accounted for the most prevalent crop types in the region, including, corn, soybeans, winter wheat, spring wheat, cotton, sorghum, and alfalfa. Annual CTM crop maps of the US Great Plains were created for 2000 to 2011 at a spatial resolution of 250 meters. The CTM achieved an 87 percent classification success rate on 1.8 million observation points that were withheld from model training. Product validation was performed on greater than 15,000 county records with a coefficient of determination of R2 = 0.76.

The Reliability of Galaxy Classifications by Citizen Scientists

NASA Astrophysics Data System (ADS)

Francis, Lennox; Kautsch, Stefan J.; Bizyaev, Dmitry

2017-01-01

Citizen scientists are becoming more and more important in helping professionals working through big data. An example in astronomy is crowdsourced galaxy classification. But how reliable are these classifications for studies of galaxy evolution? We present a tool in order to investigate those morphological classifications and test it on a diverse population on our campus. We observe a slight offset towards earlier Hubble types in the crowdsourced morphologies, when compared to professional classifications.

Circulating Selenium and Prostate Cancer Risk: A Mendelian Randomization Analysis.

PubMed

Yarmolinsky, James; Bonilla, Carolina; Haycock, Philip C; Langdon, Ryan J Q; Lotta, Luca A; Langenberg, Claudia; Relton, Caroline L; Lewis, Sarah J; Evans, David M; Davey Smith, George; Martin, Richard M

2018-05-17

In the Selenium and Vitamin E Cancer Prevention Trial (SELECT), selenium supplementation (causing a median 114 μg/L increase in circulating selenium) did not lower overall prostate cancer risk, but increased risk of high-grade prostate cancer and type 2 diabetes. Mendelian randomization analysis uses genetic variants to proxy modifiable risk factors and can strengthen causal inference in observational studies. We constructed a genetic instrument comprising 11 single nucleotide polymorphisms robustly (P < 5 × 10-8) associated with circulating selenium in genome-wide association studies. In a Mendelian randomization analysis of 72 729 men in the PRACTICAL Consortium (44 825 case subjects, 27 904 control subjects), 114 μg/L higher genetically elevated circulating selenium was not associated with prostate cancer (odds ratio [OR] = 1.01, 95% confidence interval [CI] = 0.89 to 1.13). In concordance with findings from SELECT, selenium was weakly associated with advanced (including high-grade) prostate cancer (OR = 1.21, 95% CI = 0.98 to 1.49) and type 2 diabetes (OR = 1.18, 95% CI = 0.97 to 1.43; in a type 2 diabetes genome-wide association study meta-analysis with up to 49 266 case subjects and 249 906 control subjects). Our Mendelian randomization analyses do not support a role for selenium supplementation in prostate cancer prevention and suggest that supplementation could have adverse effects on risks of advanced prostate cancer and type 2 diabetes.

The onset of modern-like Atlantic meridional overturning circulation at the Eocene-Oligocene transition: Evidence, causes, and possible implications for global cooling

NASA Astrophysics Data System (ADS)

Abelson, Meir; Erez, Jonathan

2017-06-01

A compilation of benthic δ18O from the whole Atlantic and the Southern Ocean (Atlantic sector) shows two major jumps in the interbasinal gradient of δ18O (Δδ18O) during the Eocene and the Oligocene: one at ˜40 Ma and the second concomitant with the isotopic event of the Eocene-Oligocene transition (EOT), ˜33.7 Ma ago. From previously published circulation models and proxies, we show that the first Δδ18O jump reflects the thermal isolation of Antarctica associated with the proto-Antarctic circumpolar current (ACC). The second marks the onset of interhemispheric northern-sourced circulation cell, similar to the modern Atlantic meridional overturning circulation (AMOC). The onset of AMOC-like circulation slightly preceded (100-300 kyr) the EOT, as we show by the high-resolution profiles of δ18O and δ13C previously published from DSDP/ODP sites in the Southern Ocean and South Atlantic. These events coincide with the onset of antiestuarine circulation between the Nordic seas and the North Atlantic which started around the EOT and may be connected to the deepening of the Greenland-Scotland Ridge. We suggest that while the shallow proto-ACC supplied the energy for deep ocean convection in the Southern Hemisphere, the onset of the interhemispheric northern circulation cell was due to the significant EOT intensification of deepwater formation in the North Atlantic driven by the Nordic antiestuarine circulation. This onset of the interhemispheric northern-sourced circulation cell could have prompted the EOT global cooling.