Winter CO2 efflux from cold semiarid sagebrush shrublands distributed across the rain-to-snow transition zone

NASA Astrophysics Data System (ADS)

Fellows, A.; Flerchinger, G. N.; Lohse, K. A.; Seyfried, M. S.

2017-12-01

Predicting winter CO2 efflux across the rain-to-snow transition zone is challenging in the cold semiarid northern Great Basin, USA, complicated by steep environmental gradients and marked heterogeneity in ecosystem properties. We therefore examined winter CO2 efflux over 9 site-years using 4 eddy covariance towers located in the Reynolds Creek Critical Zone Observatory. The sites were sagebrush shrublands located at 1425, 1680, 2098, and 2111 m, and spanned a large part of the rain-to-snow transition zone. We focused on two objectives. First, we quantified winter CO2 efflux at the sites, and considered how these varied with elevation. Second, we used a within-site and cross-site analysis to examine the biological and physical factors that impact winter CO2 efflux. Winter conditions were identified using temperature, snow depth, and CO2 exchange measurements and included 12,922 observations. The duration of winter conditions increased from 90 to 180 days with elevation. Peak snow depth increased from < 30 to > 100 cm with elevation. Cumulative winter CO2 efflux accounted for > 10% of the total annual CO2 efflux, increased with elevation, and was a key component of net ecosystem production at some sites in some years. The importance of winter CO2 efflux was accentuated by the region's long winters and also dry summers that decreased water availability and decomposition during non-winter periods. Preliminary regressions examining air temperature, soil temperature, wind speed, snow depth, and gross carbon uptake indicated some of these factors control the rate of winter CO2 efflux and require consideration, but that additional work is needed to disentangle co-linearity and assess the importance of these factors within and between sites. These findings suggest a consideration of winter CO2 efflux is warranted in cold winter-wet semiarid ecosystems, particularly where winters are long and non-winter CO2 efflux is strongly limited by water availability.

Constraint of soil moisture on CO2 efflux from tundra lichen, moss, and tussock in Council, Alaska, using a hierarchical Bayesian model

NASA Astrophysics Data System (ADS)

Kim, Y.; Nishina, K.; Chae, N.; Park, S. J.; Yoon, Y. J.; Lee, B. Y.

2014-10-01

The tundra ecosystem is quite vulnerable to drastic climate change in the Arctic, and the quantification of carbon dynamics is of significant importance regarding thawing permafrost, changes to the snow-covered period and snow and shrub community extent, and the decline of sea ice in the Arctic. Here, CO2 efflux measurements using a manual chamber system within a 40 m × 40 m (5 m interval; 81 total points) plot were conducted within dominant tundra vegetation on the Seward Peninsula of Alaska, during the growing seasons of 2011 and 2012, for the assessment of driving parameters of CO2 efflux. We applied a hierarchical Bayesian (HB) model - a function of soil temperature, soil moisture, vegetation type, and thaw depth - to quantify the effects of environmental factors on CO2 efflux and to estimate growing season CO2 emissions. Our results showed that average CO2 efflux in 2011 was 1.4 times higher than in 2012, resulting from the distinct difference in soil moisture between the 2 years. Tussock-dominated CO2 efflux is 1.4 to 2.3 times higher than those measured in lichen and moss communities, revealing tussock as a significant CO2 source in the Arctic, with a wide area distribution on the circumpolar scale. CO2 efflux followed soil temperature nearly exponentially from both the observed data and the posterior medians of the HB model. This reveals that soil temperature regulates the seasonal variation of CO2 efflux and that soil moisture contributes to the interannual variation of CO2 efflux for the two growing seasons in question. Obvious changes in soil moisture during the growing seasons of 2011 and 2012 resulted in an explicit difference between CO2 effluxes - 742 and 539 g CO2 m-2 period-1 for 2011 and 2012, respectively, suggesting the 2012 CO2 emission rate was reduced to 27% (95% credible interval: 17-36%) of the 2011 emission, due to higher soil moisture from severe rain. The estimated growing season CO2 emission rate ranged from 0.86 Mg CO2 in 2012 to 1.20 Mg CO2 in 2011 within a 40 m × 40 m plot, corresponding to 86 and 80% of annual CO2 emission rates within the western Alaska tundra ecosystem, estimated from the temperature dependence of CO2 efflux. Therefore, this HB model can be readily applied to observed CO2 efflux, as it demands only four environmental factors and can also be effective for quantitatively assessing the driving parameters of CO2 efflux.

Winter and early spring CO2 efflux from tundra communities of northern Alaska

USGS Publications Warehouse

Fahnestock, J.T.; Jones, M.H.; Brooks, P.D.; Walker, D.A.; Welker, J.M.

1998-01-01

Carbon dioxide concentrations through snow were measured in different arctic tundra communities on the North Slope of Alaska during winter and early spring of 1996. Subnivean CO2 concentrations were always higher than atmospheric CO2. A steady state diffusion model was used to generate conservative estimates of CO2 flux to the atmosphere. The magnitude of CO2 efflux differed with tundra community type, and rates of carbon release increased from March to May. Winter CO2 efflux was highest in riparian and snow bed communities and lowest in dry heath, upland tussock, and wet sedge communities. Snow generally accrues earlier in winter and is deeper in riparian and snow bed communities compared with other tundra communities, which are typically windswept and do not accumulate much snow during the winter. These results support the hypothesis that early and deep snow accumulation may insulate microbial populations from very cold temperatures, allowing sites with earlier snow cover to sustain higher levels of activity throughout winter compared to communities that have later developing snow cover. Extrapolating our estimates of CO2 efflux to the entire snow-covered season indicates that total carbon flux during winter in the Arctic is 13-109 kg CO2-C ha-1, depending on the vegetation community type. Wintertime CO2 flux is a potentially important, yet largely overlooked, part of the annual carbon cycle of tundra, and carbon release during winter should be accounted for in estimates of annual carbon balance in arctic ecosystems. Copyright 1998 by the American Geophysical Union.

Vertical gradients and seasonal variation in stem CO2 efflux within a Norway spruce stand.

PubMed

Tarvainen, Lasse; Räntfors, Mats; Wallin, Göran

2014-05-01

Stem CO2 efflux is known to vary seasonally and vertically along tree stems. However, annual tree- and stand-scale efflux estimates are commonly based on measurements made only a few times a year, during daytime and at breast height. In this study, the effect of these simplifying assumptions on annual efflux estimates and their influence on the estimates of the importance of stems in stand-scale carbon cycling are evaluated. In order to assess the strength of seasonal, diurnal and along-stem variability in CO2 efflux, half-hourly measurements were carried out at three heights on three mature Norway spruce (Picea abies (L.) Karst.) trees over a period of 3 years. Making the common assumption of breast height efflux rates being representative of the entire stem was found to result in underestimations of 10-17% in the annual tree-scale CO2 efflux. Upscaling using only daytime measurements from breast height increased the underestimation to 15-20%. Furthermore, the results show that the strength of the vertical gradient varies seasonally, being strongest in the early summer and non-existent during the cool months. The observed seasonality in the vertical CO2 efflux gradient could not be explained by variation in stem temperature, temperature response of the CO2 efflux (Q10), outer-bark permeability, CO2 transport in the xylem or CO2 release from the phloem. However, the estimated CO2 concentration immediately beneath the bark was considerably higher in the upper stem during the main period of diameter growth, coinciding with the strongest vertical efflux gradient. These results suggest that higher growth rates in the upper stem are the main cause for the observed vertical variation in the stem CO2 effluxes. Furthermore, the results indicate that accounting for the vertical efflux variation is essential for assessments of the importance of stems in stand-scale carbon cycling. © The Author 2014. Published by Oxford University Press. All rights reserved.

Mind the gap: non-biological processes contributing to soil CO2 efflux.

PubMed

Rey, Ana

2015-05-01

Widespread recognition of the importance of soil CO2 efflux as a major source of CO2 to the atmosphere has led to active research. A large soil respiration database and recent reviews have compiled data, methods, and current challenges. This study highlights some deficiencies for a proper understanding of soil CO2 efflux focusing on processes of soil CO2 production and transport that have not received enough attention in the current soil respiration literature. It has mostly been assumed that soil CO2 efflux is the result of biological processes (i.e. soil respiration), but recent studies demonstrate that pedochemical and geological processes, such as geothermal and volcanic CO2 degassing, are potentially important in some areas. Besides the microbial decomposition of litter, solar radiation is responsible for photodegradation or photochemical degradation of litter. Diffusion is considered to be the main mechanism of CO2 transport in the soil, but changes in atmospheric pressure and thermal convection may also be important mechanisms driving soil CO2 efflux greater than diffusion under certain conditions. Lateral fluxes of carbon as dissolved organic and inorganic carbon occur and may cause an underestimation of soil CO2 efflux. Traditionally soil CO2 efflux has been measured with accumulation chambers assuming that the main transport mechanism is diffusion. New techniques are available such as improved automated chambers, CO2 concentration profiles and isotopic techniques that may help to elucidate the sources of carbon from soils. We need to develop specific and standardized methods for different CO2 sources to quantify this flux on a global scale. Biogeochemical models should include biological and non-biological CO2 production processes before we can predict the response of soil CO2 efflux to climate change. Improving our understanding of the processes involved in soil CO2 efflux should be a research priority given the importance of this flux in the global carbon budget. © 2014 John Wiley & Sons Ltd.

Relationship between root water uptake and soil respiration: A modeling perspective

NASA Astrophysics Data System (ADS)

Teodosio, Bertrand; Pauwels, Valentijn R. N.; Loheide, Steven P.; Daly, Edoardo

2017-08-01

Soil moisture affects and is affected by root water uptake and at the same time drives soil CO2 dynamics. Selecting root water uptake formulations in models is important since this affects the estimation of actual transpiration and soil CO2 efflux. This study aims to compare different models combining the Richards equation for soil water flow to equations describing heat transfer and air-phase CO2 production and flow. A root water uptake model (RWC), accounting only for root water compensation by rescaling water uptake rates across the vertical profile, was compared to a model (XWP) estimating water uptake as a function of the difference between soil and root xylem water potential; the latter model can account for both compensation (XWPRWC) and hydraulic redistribution (XWPHR). Models were compared in a scenario with a shallow water table, where the formulation of root water uptake plays an important role in modeling daily patterns and magnitudes of transpiration rates and CO2 efflux. Model simulations for this scenario indicated up to 20% difference in the estimated water that transpired over 50 days and up to 14% difference in carbon emitted from the soil. The models showed reduction of transpiration rates associated with water stress affecting soil CO2 efflux, with magnitudes of soil CO2 efflux being larger for the XWPHR model in wet conditions and for the RWC model as the soil dried down. The study shows the importance of choosing root water uptake models not only for estimating transpiration but also for other processes controlled by soil water content.

Vertical profile of branch CO2 efflux in a Norway spruce tree: a case study

NASA Astrophysics Data System (ADS)

Acosta, M.; Pavelka, M.

2012-04-01

Despite woody-tissue CO2 effluxes having been recognized as an important component of forest carbon budget due to the fraction of assimilates used and the dramatic increase in woody with stand development, there is limited research to determine the CO2 efflux vertical variability of woody-tissue components. For a better understanding and quantification of branch woody-tissue CO2 efflux in forest ecosystems, it is necessary to identify the environmental factors influencing it and the role of the branch distribution within the canopy. The proper assessment of this forest component will improve the knowledge of the ratio between ecosystem respiration and gross primary production at forest ecosystem. In order to achieve this goal, branch CO2 efflux of Norway spruce tree was measured in ten branches at five different whorls during the growing season 2004 (from June till October) in campaigns of 3-4 times per month at the Beskydy Mts., the Czech Republic, using a portable infrared gas analyzer operating as a closed system. Branch woody tissue temperature was measured continuously in ten minutes intervals for each sample position during the whole experiment period. On the basis of relation between CO2 efflux rate and woody tissue temperature a value of Q10 and normalized CO2 efflux rate (E10 - CO2 efflux rate at 10° C) were calculated for each sampled position. Estimated Q10 values ranged from 2.12 to 2.89 and E10 ranged from 0.41 to 1.19 ?molCO2m-2 s-1. Differences in branch CO2 efflux were found between orientations; East side branches presented higher efflux rate than west side branches. The highest branch CO2 efflux rate values were measured in August and the lowest in October, which were connected with woody tissue temperature and ontogenetic processes during these periods. Branch CO2 efflux was significantly and positively correlated with branch position within canopy and woody tissue temperature. Branches from the upper whorls showed higher respiration activity and seasonal dynamics than branches from the lower whorls. The results presented in this study serve primarily to demonstrate the importance of branch location within canopy from the point of view of the CO2 efflux. CO2 efflux from branch woody-tissue exhibited vertical differentiation among whorls that must be taken into account when collecting, analysis and interpreting data. The determination of CO2 efflux from individual components at ecosystem level is still needed to gain a better understanding of the carbon budget issues. Such data are important for evaluating effect of global climate or other possible influences on carbon cycling and sequestration in forest ecosystems. Acknowledgment: This work was support by the projects CZ.1.05/1.1.00/02.0073 from the Ministry of Education, Youth and Sports and LM2010007 from the Ministry of the Environmental of Czech Republic

Soil efflux and total emission rates of magmatic CO2 at the horseshoe lake tree kill, mammoth mountain, California, 1995-1999

USGS Publications Warehouse

Gerlach, T.M.; Doukas, M.P.; McGee, K.A.; Kessler, R.

2001-01-01

We report the results of eight soil CO2 efflux surveys by the closed circulation chamber method at the Horseshoe Lake tree kill (HLTK) - the largest tree kill on Mammoth Mountain. The surveys were undertaken from 1995 to 1999 to constrain total HLTK CO2 emissions and to evaluate occasional efflux surveys as a surveillance tool for the tree kills. HLTK effluxes range from 1 to > 10,000 g m -2 day -1 (grams CO2 per square meter per day); they are not normally distributed. Station efflux rates can vary by 7-35% during the course of the 8- to 16-h surveys. Disturbance of the upper 2 cm of ground surface causes effluxes to almost double. Semivariograms of efflux spatial covariance fit exponential or spherical models; they lack nugget effects. Efflux contour maps and total CO2 emission rates based on exponential, spherical, and linear kriging models of survey data are nearly identical; similar results are also obtained with triangulation models, suggesting that the kriging models are not seriously distorted by the lack of normal efflux distributions. In addition, model estimates of total CO2 emission rates are relatively insensitive to the measurement precision of the efflux rates and to the efflux value used to separate magmatic from forest soil sources of CO2. Surveys since 1997 indicate that, contrary to earlier speculations, a termination of elevated CO2 emissions at the HLTK is unlikely anytime soon. The HLTK CO2 efflux anomaly fluctuated greatly in size and intensity throughout the 1995-1999 surveys but maintained a N-S elongation, presumably reflecting fault control of CO2 transport from depth. Total CO2 emission rates also fluctuated greatly, ranging from 46 to 136 t day-1 (metric tons CO2 per day) and averaging 93 t day-1. The large inter-survey variations are caused primarily by external (meteorological) processes operating on time scales of hours to days. The externally caused variations can mask significant changes occurring at depth; a striking example is the masking of a degassing event generated at depth and detected by a soil gas sensor network in September 1997 while an efflux survey was in progress. Thus, occasional efflux surveys are not an altogether effective surveillance tool for the HLTK, and making them effective by greatly increasing their frequency may not be practical. Published by Elsevier Science B.V.

Variability in soil CO2 production and surface CO2 efflux across riparian-hillslope transitions

Treesearch

Vincent Jerald Pacific

2007-01-01

The spatial and temporal controls on soil CO2 production and surface CO2 efflux have been identified as an outstanding gap in our understanding of carbon cycling. I investigated both the spatial and temporal variability of soil CO2 concentrations and surface CO2 efflux across eight topographically distinct riparian-hillslope transitions in the ~300 ha subalpine upper-...

Sapwood temperature gradients between lower stems and the crown do not influence estimates of stand-level stem CO(2) efflux.

PubMed

Bowman, William P; Turnbull, Matthew H; Tissue, David T; Whitehead, David; Griffin, Kevin L

2008-10-01

Temperature plays a critical role in the regulation of respiration rates and is often used to scale measurements of respiration to the stand-level and calculate annual respiratory fluxes. Previous studies have indicated that failure to consider temperature gradients between sun-exposed stems and branches in the crown and shaded lower stems may result in errors when deriving stand-level estimates of stem CO(2) efflux. We measured vertical gradients in sapwood temperature in a mature lowland podocarp rain forest in New Zealand to: (1) estimate the effects of within-stem temperature variation on the vertical distribution of stem CO(2) efflux; and (2) use these findings to estimate stand-level stem CO(2) efflux for this forest. Large within-stem gradients in sapwood temperature (1.6 +/- 0.1 to 6.0 +/- 0.5 degrees C) were observed. However, these gradients did not significantly influence the stand-level estimate of stem CO(2) efflux in this forest (536 +/- 42 mol CO(2) ha(-1) day(-1)) or the vertical distribution of stem CO(2) efflux, because of the opposing effects of daytime warming and nighttime cooling on CO(2) efflux in the canopy, and the small fraction of the woody biomass in the crowns of forest trees. Our findings suggest that detailed measurements of within-stand temperature gradients are unlikely to greatly improve the accuracy of tree- or stand-level estimates of stem CO(2) efflux.

Moisture and substrate availability constrain soil trace gas fluxes in an eastern Amazonian regrowth forest

NASA Astrophysics Data System (ADS)

Vasconcelos, Steel S.; Zarin, Daniel J.; Capanu, Marinela; Littell, Ramon; Davidson, Eric A.; Ishida, Francoise Y.; Santos, Elisana B.; Araújo, Maristela M.; AragãO, DéBora V.; Rangel-Vasconcelos, LíVia G. T.; de Assis Oliveira, Francisco; McDowell, William H.; de Carvalho, Claudio José R.

2004-06-01

Changes in land-use and climate are likely to alter moisture and substrate availability in tropical forest soils, but quantitative assessment of the role of resource constraints as regulators of soil trace gas fluxes is rather limited. The primary objective of this study was to quantify the effects of moisture and substrate availability on soil trace gas fluxes in an Amazonian regrowth forest. We measured the efflux of carbon dioxide (CO2), nitric oxide (NO), nitrous oxide (N2O), and methane (CH4) from soil in response to two experimental manipulations. In the first, we increased soil moisture availability during the dry season by irrigation; in the second, we decreased substrate availability by continuous removal of aboveground litter. In the absence of irrigation, soil CO2 efflux decreased during the dry season while irrigation maintained soil CO2 efflux levels similar to the wet season. Large variations in soil CO2 efflux consistent with a significant moisture constraint on respiration were observed in response to soil wet-up and dry-down events. Annual soil C efflux for irrigated plots was 27 and 13% higher than for control plots in 2001 and 2002, respectively. Litter removal significantly reduced soil CO2 efflux; annual soil C efflux in 2002 was 28% lower for litter removal plots compared to control plots. The annual soil C efflux:litterfall C ratio for the control treatment (4.0-5.2) was consistent with previously reported values for regrowth forests that indicate a relatively large belowground C allocation. In general, fluxes of N2O and CH4 were higher during the wet season and both fluxes increased during dry-season irrigation. There was no seasonal effect on NO fluxes. Litter removal had no significant impact on N oxide or CH4 emissions. Net soil nitrification did not respond to dry-season irrigation, but was somewhat reduced by litter removal. Overall, these results demonstrate significant soil moisture and substrate constraints on soil trace gas emissions, particularly for CO2, and suggest that climate and land-use changes that alter moisture and substrate availability are therefore likely to have an impact on atmosphere chemistry.

Soil CO2 emissions from Northern Andean páramo ecosystems: effects of fallow agriculture.

PubMed

Cabaneiro, Ana; Fernandez, Irene; Pérez-Ventura, Luis; Carballas, Tarsy

2008-03-01

The effects of fallow agriculture on soil organic matter (SOM) dynamics and CO2 emissions were assessed in the tropical Andean páramo ecosystem. Possible changes during the cultivation-fallow cycle were monitored in four areas of the Quebrada Piñuelas valley (Venezuela). Uncultivated soils and plots at different stages of a complete cultivation--fallow cycle were incubated, and SOM mineralization kinetics was determined. Soils exhibited a low SOM mineralization activity, total CO2 evolved never reaching 3% of soil carbon, pointing to a stabilized SOM. Potential soil CO2 effluxes differed significantly according to their plot aspect: northeast (NE)-aspect soils presented higher CO2 effluxes than southwest (SW)-aspect soils. Soil CO2 emissions decreased after ploughing as compared to virgin páramo; low CO2 effluxes were still observed during cropping periods, increasing progressively to reach the highest values after 4-5 y of fallow. In all cases, experimental C mineralization data was fitted to a double exponential kinetic model. High soil labile C pool variability was observed, and two different trends were identified: NE-oriented soils showed more labile C and a wider range of values than SW-facing soils. Labile C positively correlated with CO2 effluxes and negatively with its instantaneous mineralization rate. The instantaneous mineralization rate of the recalcitrant C pool positively correlated with %C evolved as CO2 and negatively with soil C and Al2O3 contents, suggesting the importance of aluminum on SOM stability. The CO2 effluxes from these ecosystems, as well as the proportion of soil C released to the atmosphere, seem to depend not only on the size of the labile C pool but also on the accessibility of the more stabilized SOM. Therefore, fallow agriculture produces moderate changes in SOM quality and temporarily alters the CO2 emission capacity of these soils.

Biases of chamber methods for measuring soil CO2 efflux demonstrated with a laboratory apparatus.

Treesearch

S. Mark Nay; Kim G. Mattson; Bernard T. Bormann

1994-01-01

Investigators have historically measured soil CO2 efflux as an indicator of soil microbial and root activity and more recently in calculations of carbon budgets. The most common methods estimate CO2 efflux by placing a chamber over the soil surface and quantifying the amount of CO2 entering the...

Ecosystem CO2 and CH4 exchange in a mixed tundra and a fen within a hydrologically diverse Arctic landscape: 1. Modeling versus measurements

NASA Astrophysics Data System (ADS)

Grant, R. F.; Humphreys, E. R.; Lafleur, P. M.

2015-07-01

CO2 and CH4 exchange are strongly affected by hydrology in landscapes underlain by permafrost. Hypotheses for these effects in the model ecosys were tested by comparing modeled CO2 and CH4 exchange with CO2 fluxes measured by eddy covariance from 2006 to 2009, and with CH4 fluxes measured with surface chambers in 2008, along a topographic gradient at Daring Lake, NWT. In an upland tundra, rises in net CO2 uptake in warmer years were constrained by declines in CO2 influxes when vapor pressure deficits (D) exceeded 1.5 kPa and by rises in CO2 effluxes with greater active layer depth. Consequently, net CO2 uptake rose little with warming. In a lowland fen, CO2 influxes declined less with D and CO2 effluxes rose less with warming, so that rises in net CO2 uptake were greater than those in the tundra. Greater declines in CO2 influxes with warming in the tundra were modeled from greater soil-plant-atmosphere water potential gradients that developed under higher D in drained upland soil, and smaller rises in CO2 effluxes with warming in the fen were modeled from O2 constraints to heterotrophic and belowground autotrophic respiration from a shallow water table in poorly drained lowland soil. CH4 exchange modeled during July and August indicated very small influxes in the tundra and larger effluxes characterized by afternoon emission events caused by degassing of warming soil in the fen. Emissions of CH4 modeled from degassing during soil freezing in October-November contributed about one third of the annual total.

Estimating lake-atmosphere CO2 exchange

USGS Publications Warehouse

Anderson, D.E.; Striegl, Robert G.; Stannard, D.I.; Michmerhuizen, C.M.; McConnaughey, T.A.; LaBaugh, J.W.

1999-01-01

Lake-atmosphere CO2 flux was directly measured above a small, woodland lake using the eddy covariance technique and compared with fluxes deduced from changes in measured lake-water CO2 storage and with flux predictions from boundary-layer and surface-renewal models. Over a 3-yr period, lake-atmosphere exchanges of CO2 were measured over 5 weeks in spring, summer, and fall. Observed springtime CO2 efflux was large (2.3-2.7 ??mol m-2 s-1) immediately after lake-thaw. That efflux decreased exponentially with time to less than 0.2 ??mol m-2 s-1 within 2 weeks. Substantial interannual variability was found in the magnitudes of springtime efflux, surface water CO2 concentrations, lake CO2 storage, and meteorological conditions. Summertime measurements show a weak diurnal trend with a small average downward flux (-0.17 ??mol m-2 s-1) to the lake's surface, while late fall flux was trendless and smaller (-0.0021 ??mol m-2 s-1). Large springtime efflux afforded an opportunity to make direct measurement of lake-atmosphere fluxes well above the detection limits of eddy covariance instruments, facilitating the testing of different gas flux methodologies and air-water gas-transfer models. Although there was an overall agreement in fluxes determined by eddy covariance and those calculated from lake-water storage change in CO2, agreement was inconsistent between eddy covariance flux measurements and fluxes predicted by boundary-layer and surface-renewal models. Comparison of measured and modeled transfer velocities for CO2, along with measured and modeled cumulative CO2 flux, indicates that in most instances the surface-renewal model underpredicts actual flux. Greater underestimates were found with comparisons involving homogeneous boundary-layer models. No physical mechanism responsible for the inconsistencies was identified by analyzing coincidentally measured environmental variables.

Can we relate respiration rates of bark and wood with tissue nitrogen concentrations and branch-level CO2 fluxes across woody species?

NASA Astrophysics Data System (ADS)

Eller, A. S.; Wright, I.; Cernusak, L. A.

2013-12-01

Respiration from above-ground woody tissue is generally responsible for 5-15% of ecosystem respiration (~ 30% of total above-ground respiration). The CO2 respired by branches comes from both the sapwood and the living layers within the bark, but because there is considerable movement of respired CO2 within woody tissues (e.g. in the transpiration stream), and because the bark can present a considerable barrier to CO2 diffusion, it can be difficult to interpret measured CO2 efflux from intact branches in relation to the respiration rates of the component tissues, and to relative mass allocation to each. In this study we investigated these issues in 15 evergreen tree and shrub species native to the Sydney area in eastern Australia. We measured CO2 efflux and light-dependent refixation of respired CO2 in photosynthetic bark from the exterior surfaces of branches (0.5-1.5 cm in diameter), and measured the tissue-specific respiration rates of the bark and wood from those same branches. We also measured the nitrogen content and tissue density of the wood and bark to determine: 1) Among species, what is the relationship between %N and tissue respiration? 2) How is photosynthetic refixation of CO2 related to respiration and %N in the bark and underlying wood? and 3) What is the relationship between branch CO2 efflux and the respiration rates of the underlying wood and bark that make up the branch? Across the 15 species %N was a better predictor of respiration in wood than in bark. CO2 efflux measured from the exterior of the stem in the dark was positively correlated with photosynthetic refixation and explained ~40% of the variation in rates of refixation. Refixation rates were not strongly related to bark or wood %N. Differences among species in CO2 efflux rates were not well explained by differences in bark or wood %N and there was a stronger relationship between bark respiration and CO2 efflux than between wood respiration and CO2 efflux. These results suggest that the CO2 efflux rates measured on branch exterior surfaces may be driven more strongly by bark respiration than wood respiration and a better understanding of bark respiration will increase our ability to predict CO2 efflux from branches

Inside out: efflux of carbon dioxide from leaves represents more than leaf metabolism.

PubMed

Stutz, Samantha S; Anderson, Jeremiah; Zulick, Rachael; Hanson, David T

2017-05-17

High concentrations of inorganic carbon in the xylem, produced from root, stem, and branch respiration, travel via the transpiration stream and eventually exit the plant through distant tissues as CO2. Unlike previous studies that focused on the efflux of CO2 from roots and woody tissues, we focus on efflux from leaves and the potential effect on leaf respiration measurements. We labeled transported inorganic carbon, spanning reported xylem concentrations, with 13C and then manipulated transpiration rates in the dark in order to vary the rates of inorganic carbon supply to cut leaves from Brassica napus and Populus deltoides. We used tunable diode laser absorbance spectroscopy to directly measure the rate of gross 13CO2 efflux, derived from inorganic carbon supplied from outside of the leaf, relative to gross 12CO2 efflux generated from leaf cells. These experiemnts showed that 13CO2 efflux was dependent upon the rate of inorganic carbon supply to the leaf and the rate of transpiration. Our data show that the gross leaf efflux of xylem-transported CO2 is likely small in the dark when rates of transpiration are low. However, gross leaf efflux of xylem-transported CO2 could approach half the rate of leaf respiration in the light when transpiration rates and branch inorganic carbon concentrations are high, irrespective of the grossly different petiole morphologies in our experiment. © The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology.

The Impact of Diesel Oil Pollution on the Hydrophobicity and CO2 Efflux of Forest Soils.

PubMed

Hewelke, Edyta; Szatyłowicz, Jan; Hewelke, Piotr; Gnatowski, Tomasz; Aghalarov, Rufat

2018-01-01

The contamination of soil with petroleum products is a major environmental problem. Petroleum products are common soil contaminants as a result of human activities, and they are causing substantial changes in the biological (particularly microbiological) processes, chemical composition, structure and physical properties of soil. The main objective of this study was to assess the impact of soil moisture on CO 2 efflux from diesel-contaminated albic podzol soils. Two contamination treatments (3000 and 9000 mg of diesel oil per kg of soil) were prepared for four horizons from two forest study sites with different initial levels of soil water repellency. CO 2 emissions were measured using a portable infrared gas analyser (LCpro+, ADC BioScientific, UK) while the soil samples were drying under laboratory conditions (from saturation to air-dry). The assessment of soil water repellency was performed using the water drop penetration time test. An analysis of variance (ANVOA) was conducted for the CO 2 efflux data. The obtained results show that CO 2 efflux from diesel-contaminated soils is higher than efflux from uncontaminated soils. The initially water-repellent soils were found to have a bigger CO 2 efflux. The non-linear relationship between soil moisture content and CO 2 efflux only existed for the upper soil horizons, while for deeper soil horizons, the efflux is practically independent of soil moisture content. The contamination of soil by diesel leads to increased soil water repellency.

The effect of physical back-diffusion of 13CO2 tracer on the coupling between photosynthesis and soil CO2 efflux in grassland.

PubMed

Burri, Susanne; Sturm, Patrick; Baur, Thomas; Barthel, Matti; Knohl, Alexander; Buchmann, Nina

2014-01-01

Pulse labelling experiments provide a common tool to study short-term processes in the plant-soil system and investigate below-ground carbon allocation as well as the coupling of soil CO(2) efflux to photosynthesis. During the first hours after pulse labelling, the measured isotopic signal of soil CO(2) efflux is a combination of both physical tracer diffusion into and out of the soil as well as biological tracer release via root and microbial respiration. Neglecting physical back-diffusion can lead to misinterpretation regarding time lags between photosynthesis and soil CO(2) efflux in grassland or any ecosystem type where the above-ground plant parts cannot be labelled in gas-tight chambers separated from the soil. We studied the effects of physical (13)CO(2) tracer back-diffusion in pulse labelling experiments in grassland, focusing on the isotopic signature of soil CO(2) efflux. Having accounted for back-diffusion, the estimated time lag for first tracer appearance in soil CO(2) efflux changed from 0 to 1.81±0.56 h (mean±SD) and the time lag for maximum tracer appearance from 2.67±0.39 to 9.63±3.32 h (mean±SD). Thus, time lags were considerably longer when physical tracer diffusion was considered. Using these time lags after accounting for physical back-diffusion, high nocturnal soil CO(2) efflux rates could be related to daytime rates of gross primary productivity (R(2)=0.84). Moreover, pronounced diurnal patterns in the δ(13)C of soil CO(2) efflux were found during the decline of the tracer over 3 weeks. Possible mechanisms include diurnal changes in the relative contributions of autotrophic and heterotrophic soil respiration as well as their respective δ(13)C values. Thus, after accounting for physical back-diffusion, we were able to quantify biological time lags in the coupling of photosynthesis and soil CO(2) efflux in grassland at the diurnal time scale.

CO2 efflux from soils with seasonal water repellency

NASA Astrophysics Data System (ADS)

Urbanek, Emilia; Doerr, Stefan H.

2017-10-01

Soil carbon dioxide (CO2) emissions are strongly dependent on pore water distribution, which in turn can be modified by reduced wettability. Many soils around the world are affected by soil water repellency (SWR), which reduces infiltration and results in diverse moisture distribution. SWR is temporally variable and soils can change from wettable to water-repellent and vice versa throughout the year. Effects of SWR on soil carbon (C) dynamics, and specifically on CO2 efflux, have only been studied in a few laboratory experiments and hence remain poorly understood. Existing studies suggest soil respiration is reduced with increasing severity of SWR, but the responses of soil CO2 efflux to varying water distribution created by SWR are not yet known.Here we report on the first field-based study that tests whether SWR indeed reduces soil CO2 efflux, based on in situ measurements carried out over three consecutive years at a grassland and pine forest sites under the humid temperate climate of the UK.Soil CO2 efflux was indeed very low on occasions when soil exhibited consistently high SWR and low soil moisture following long dry spells. Low CO2 efflux was also observed when SWR was absent, in spring and late autumn when soil temperatures were low, but also in summer when SWR was reduced by frequent rainfall events. The highest CO2 efflux occurred not when soil was wettable, but when SWR, and thus soil moisture, was spatially patchy, a pattern observed for the majority of the measurement period. Patchiness of SWR is likely to have created zones with two different characteristics related to CO2 production and transport. Zones with wettable soil or low persistence of SWR with higher proportion of water-filled pores are expected to provide water with high nutrient concentration resulting in higher microbial activity and CO2 production. Soil zones with high SWR persistence, on the other hand, are dominated by air-filled pores with low microbial activity, but facilitating O2 supply and CO2 exchange between the soil and the atmosphere.The effects of soil moisture and SWR on soil CO2 efflux are strongly co-correlated, but the results of this study support the notion that SWR indirectly affects soil CO2 efflux by affecting soil moisture distribution. The appearance of SWR is influenced by moisture and temperature, but once present, SWR influences subsequent infiltration patterns and resulting soil water distribution, which in turn affects respiration. This study demonstrates that SWR can have contrasting effects on CO2 efflux. It can reduce it in dry soil zones by preventing their re-wetting, but, at the field soil scale and when spatially variable, it can also enhance overall CO2 efflux. Spatial variability in SWR and associated soil moisture distribution therefore need to be considered when evaluating the effects of SWR on soil C dynamics under current and predicted future climatic conditions.

The effect to the water stress to soil CO2 efflux in the Siberian boreal forest

NASA Astrophysics Data System (ADS)

Makhnykina, A. V.; Prokishkin, A. S.; Verkhovets, S. V.; Koshurnikova, N. N.

2017-12-01

The boreal forests in Siberia covered more than 70% area of this region. Due to the climate change this ecosystems represent a very sensitive and significant source of carbon. In forests, total ecosystem respiration tends to be dominated by soil respiration, which accounts for approximately 69% of this large flux (Janssens et al., 2001). Dynamic global vegetation models predict that soil respiration will increase more than total net primary productivity in response to warmer temperatures and increase in precipitation, the terrestrial carbon sink is expected to decline significantly (Bonan et al., 2003). The aim of the present study was to identify the response of the soil CO2 efflux to the different amount of water input for two highly differentiated years by the precipitation conditions in the middle taiga forests in Central Siberia. The study was conducted in the pine forests in Central Siberia (60°N, 90°E), Russia. We used the automated soil CO2 flux system LI-8100 for measuring the soil efflux. Soil temperature was measured with Soil Temperature Probe Type E in three depths 5, 10, 15 cm. Volumetric soil moisture was measured with Theta Probe Model ML2. We constructed the field experiment based on the addition of different amount of water (0%, 25%, 50% and 100% sites) after each rain event during the growing season. We found that the amount of precipitation have a huge impact to the value of soil CO2 efflux. For the more precipitated year (2015) the fluxes were almost twice higher compared to less precipitated year (2016). The max fluxes during the season in 2015 observed at the site without any water input there and the min one - for the 100% precipitation site (natural rain conditions). In 2016 we identified the opposite response: the max soil efflux demonstrated the site with 100% precipitation conditions (Fig. 1). We also detected the high dependence between the soil temperature and soil CO2 efflux for the site with 0% additional water input in more precipitated year (with excluding the precipitation factor). These findings confirmed that the increase of precipitation in the boreal forests will enhance soil CO2 efflux.

Interpretation and evaluation of combined measurement techniques for soil CO2 efflux: Discrete surface chambers and continuous soil CO2 concentration probes

Treesearch

Diego A. Riveros-Iregui; Brian L. McGlynn; Howard E. Epstein; Daniel L. Welsch

2008-01-01

Soil CO2 efflux is a large respiratory flux from terrestrial ecosystems and a critical component of the global carbon (C) cycle. Lack of process understanding of the spatiotemporal controls on soil CO2 efflux limits our ability to extrapolate from fluxes measured at point scales to scales useful for corroboration with other ecosystem level measures of C exchange....

Diurnal and seasonal patterns of ecosystem CO{sub 2} efflux from upland tundra in the foothills of the Brooks Range, Alaska, U.S.A.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Oberbauer, S.F.; Gillespie, C.T.; Cheng, Weixin

1996-08-01

Carbon dioxide efflux and soil microenvironment were measured in three upland tundra communities in the foothills of the Brooks Range in arctic Alaska to determine the magnitude of CO{sub 2} efflux rates and the relative importance of the belowground factors that influence them. Gas exchange and soil microenvironment measurements were made weekly between 14 June and 31 July 1990. The study communities included lichen-heath, a sparse community vegetated by lichens and dwarf ericaceous shrubs on rocky soils, moist Cassiope dwarf-shrub heath tundra, dominated by Carex and evergreen and deciduous shrubs on relatively deep organic soils, and dry Cassiope dwarf-shrub heathmore » of stone-stripe areas, which was of intermediate character. Rates of CO{sub 2} efflux were similar for the three communities until mid-season when they peaked at rates between 4.9 and 5.9 g m{sup {minus}2} d{sup {minus}1}. Following the mid-season peak, the rates in all three communities declined, particularly in the lichen-heath. Seasonal patterns of CO{sub 2} efflux, soil temperature, and soil moisture suggest changing limitations to CO{sub 2} efflux, soil temperature, and soil moisture suggest changing limitations to CO{sub 2} efflux over the course of the season. Rates of carbon dioxide efflux followed changes in soil temperature early in the season when soil moisture was highest. Mid-season efflux appeared to be limited by soil, moss, and lichen hydration until the end of July, when temperature again limited efflux. Differences between the communities were related to microenvironmental differences and probable differences in carbon quality. The presence of peat-forming mosses is suggested to play an important role in differences in efflux and micro-environment among the communities. 32 refs., 3 figs., 4 tab.« less

Reduced tillage and cover crops as a strategy for mitigating atmospheric CO2 increase through soil organic carbon sequestration in dry Mediterranean agroecosystems.

NASA Astrophysics Data System (ADS)

Almagro, María; Garcia-Franco, Noelia; de Vente, Joris; Boix-Fayos, Carolina; Díaz-Pereira, Elvira; Martínez-Mena, María

2016-04-01

The implementation of sustainable land management (SLM) practices in semiarid Mediterranean agroecosystems can be beneficial to maintain or enhance levels of soil organic carbon and mitigate current atmospheric CO2 increase. In this study, we assess the effects of different tillage treatments (conventional tillage (CT), reduced tillage (RT), reduced tillage combined with green manure (RTG), and no tillage (NT)) on soil CO2 efflux, aggregation and organic carbon stabilization in two semiarid organic rainfed almond (Prunus dulcis Mill., var. Ferragnes) orchards located in SE Spain Soil CO2 efflux, temperature and moisture were measured monthly between May 2012 and December 2014 (site 1), and between February 2013 and December 2014 (site 2). In site 1, soil CO2 efflux rates were also measured immediately following winter and spring tillage operations. Aboveground biomass inputs were estimated at the end of the growing season in each tillage treatment. Soil samples (0-15 cm) were collected in the rows between the trees (n=4) in October 2012. Four aggregate size classes were distinguished by sieving (large and small macroaggregates, free microaggregates, and free silt plus clay fraction), and the microaggregates occluded within macroaggregates (SMm) were isolated. Soil CO2efflux rates in all tillage treatments varied significantly during the year, following changes during the autumn, winter and early spring, or changes in soil moisture during late spring and summer. Repeated measures analyses of variance revealed that there were no significant differences in soil CO2 efflux between tillage treatments throughout the study period at both sites. Average annual values of C lost by soil respiration were slightly but not significantly higher under RT and RTG treatments (492 g C-CO2 m-2 yr-1) than under NT treatment (405 g C-CO2 m-2 yr-1) in site 1, while slightly but not significantly lower values were observed under RT and RTG treatments (468 and 439 g C-CO2 m-2 yr-1, respectively) than under CT treatment (399 g C-CO2 m-2 yr-1) in site 2. Tillage operations had a rapid but short-lived effect on soil CO2 efflux rates, with no significant influence on the annual soil CO2 emissions. The larger amounts of plant biomass incorporated into soil annually in the reduced tillage treatments compared to the conventional tillage treatment promoted soil aggregation and the physico-chemical soil organic carbon stabilization while soil CO2 emissions did not significantly increase. According to our results, reduced-tillage is strongly recommended as a beneficial SLM strategy for mitigating atmospheric CO2 increase through soil carbon sequestration and stabilization in semiarid Mediterranean agroecosystems.

Ethanol synthesis and aerobic respiration in the laboratory by leader segments of Douglas-fir seedlings from winter and spring.

PubMed

Joseph, Gladwin; Kelsey, Rick G

2004-05-01

Stem segments from terminal leaders of Douglas-fir, Pseudotsuga menziesii (Mirb.) Franco, seedlings were sampled in mid-December when cambial cells were dormant. The residual, debudded leaders were resampled again in early May when the cambium was metabolically active. May stems had higher constitutive ethanol concentrations than December stems. This was not the result of cambial hypoxia generated by rapid spring respiration rates, because when aerobic respiration was stimulated by incubating the stems in air at 30 degrees C ethanol production was induced in December, but not in May. Rapid respiration rates at 30 degrees C may have depleted O(2) supplies and induced ethanol production in December stems because dormant, thick-walled cambial cells may be less permeable to CO(2) and O(2), compared with metabolically active, thin-walled cambial cells in May. December stem segments incubated in a N(2) atmosphere at 30 degrees C synthesized 1.8 times more ethanol than segments from May, most likely because spring growth had reduced the soluble sugars available for fermentation. CO(2) efflux from May stems (after 5.5 h of incubation at 30 degrees C) was equal to December stems per unit volume, but greater than December stems per unit surface area. N(2)-induced ethanol concentrations were positively related with CO(2) efflux per unit volume, indicating that rapidly respiring leaders can maintain rapid fermentation rates, provided soluble sugars are readily available. N(2)-induced ethanol and CO(2) efflux per unit volume declined with increasing leader diameter in both seasons, whereas there were no relationships between CO(2) efflux per unit surface area and diameter. Cambium physiology and phenology influence the induction of fermentation and concentrations of ethanol produced in terminal leaders of Douglas-fir, and probably other conifers as well. This needs to be considered when comparing fermentation among species, or comparing individuals from different seasons, or disparate ages within a species.

Minimising methodological biases to improve the accuracy of partitioning soil respiration using natural abundance 13C.

PubMed

Snell, Helen S K; Robinson, David; Midwood, Andrew J

2014-11-15

Microbial degradation of soil organic matter (heterotrophic respiration) is a key determinant of net ecosystem exchange of carbon, but it is difficult to measure because the CO2 efflux from the soil surface is derived not only from heterotrophic respiration, but also from plant root and rhizosphere respiration (autotrophic). Partitioning total CO2 efflux can be achieved using the different natural abundance stable isotope ratios (δ(13)C) of root and soil CO2. Successful partitioning requires very accurate measurements of total soil efflux δ(13)CO2 and the δ(13)CO2 of the autotrophic and heterotrophic sources, which typically differ by just 2-8‰. In Scottish moorland and grass mesocosm studies we systematically tested some of the most commonly used techniques in order to identify and minimise methodological errors. Typical partitioning methods are to sample the total soil-surface CO2 efflux using a chamber, then to sample CO2 from incubated soil-free roots and root-free soil. We investigated the effect of collar depth on chamber measurements of surface efflux δ(13)CO2 and the effect of incubation time on estimates of end-member δ(13)CO2. (1) a 5 cm increase in collar depth affects the measurement of surface efflux δ(13)CO2 by -1.5‰ and there are fundamental inconsistencies between modelled and measured biases; (2) the heterotrophic δ(13)CO2 changes by up to -4‰ within minutes of sampling; we recommend using regression to estimate the in situ δ(13)CO2 values; (3) autotrophic δ(13)CO2 measurements are reliable if root CO2 is sampled within an hour of excavation; (4) correction factors should be used to account for instrument drift of up to 3‰ and concentration-dependent non-linearity of CRDS (cavity ringdown spectroscopy) analysis. Methodological biases can lead to large inaccuracies in partitioning estimates. The utility of stable isotope partitioning of soil CO2 efflux will be enhanced by consensus on the optimum measurement protocols and by minimising disturbance, particularly during chamber measurements. Copyright © 2014 John Wiley & Sons, Ltd.

Partitioning of soil CO2 efflux in un-manipulated and experimentally flooded plots of a temperate fen

NASA Astrophysics Data System (ADS)

Wunderlich, S.; Borken, W.

2012-05-01

Peatlands store large amounts of organic carbon, but the carbon stock is sensitive to changes in precipitation or water table manipulations. Restoration of drained peatlands by drain blocking and flooding is a common measure to conserve and augment the carbon stock of peatland soils. Here, we report to what extent flooding affected the contribution of heterotrophic and rhizosphere respiration to soil CO2 efflux in a grass-dominated mountain fen, Germany. Soil CO2 efflux was measured in three un-manipulated control plots and three flooded plots in two consecutive years. Flooding was achieved by permanent irrigation during the growing seasons. Radiocarbon signatures of CO2 from different sources including soil CO2 efflux, incubated peat cores and live grass roots were repeatedly analyzed for partitioning of soil CO2 efflux. Additionally, heterotrophic respiration and its radiocarbon signature were determined by eliminating rhizosphere respiration in trenched subplots (only control). In the control plots, rhizosphere respiration determined by 14C signatures contributed between 47 and 61% during the growing season, but was small (4%) immediately before budding. Trenching revealed a smaller rhizosphere contribution of 33% (2009) and 22% (2010) during growing seasons. Flooding reduced annual soil CO2 efflux of the fen by 42% in 2009 and by 30% in 2010. The reduction was smaller in 2010 mainly through naturally elevated water level in the control plots. A 1-week interruption of irrigation caused a strong short-lived increase in soil CO2 efflux, demonstrating the sensitivity of the fen to water table drawdown near the peat surface. The reduction in soil CO2 efflux in the flooded plots diminished the relative proportion of rhizosphere respiration from 56 to 46%, suggesting that rhizosphere respiration was slightly more sensitive to flooding than heterotrophic respiration. We conclude that the moderate decrease in rhizosphere respiration following flooding arises from a gradual change in vegetation in this fen ecosystem.

Partitioning of soil CO2 efflux in un-manipulated and experimentally flooded plots of a temperate fen

NASA Astrophysics Data System (ADS)

Wunderlich, S.; Borken, W.

2012-08-01

Peatlands store large amounts of organic carbon, but the carbon stock is sensitive to changes in precipitation or water table manipulations. Restoration of drained peatlands by drain blocking and flooding is a common measure to conserve and augment the carbon stock of peatland soils. Here, we report to what extent flooding affected the contribution of heterotrophic and rhizosphere respiration to soil CO2 efflux in a grass-dominated mountain fen in Germany. Soil CO2 efflux was measured in three un-manipulated control plots and three flooded plots in two consecutive years. Flooding was achieved by permanent irrigation during the growing seasons. Radiocarbon signatures of CO2 from different sources including soil CO2 efflux, incubated peat cores and live grass roots were repeatedly analyzed for partitioning of soil CO2 efflux. Additionally, heterotrophic respiration and its radiocarbon signature were determined by eliminating rhizosphere respiration in trenched subplots (only control). In the control plots, rhizosphere respiration determined by 14C signatures contributed between 47 and 61% during the growing season, but was small (4 ± 8%) immediately before budding. Trenching revealed a smaller rhizosphere contribution of 33 ± 8% (2009) and 22 ± 9% (2010) during growing seasons. Flooding reduced annual soil CO2 efflux of the fen by 42% in 2009 and by 30% in 2010. The reduction was smaller in 2010 mainly through naturally elevated water level in the control plots. A one-week interruption of irrigation caused a strong short-lived increase in soil CO2 efflux, demonstrating the sensitivity of the fen to water table drawdown near the peat surface. The reduction in soil CO2 efflux in the flooded plots diminished the relative proportion of rhizosphere respiration from 56 to 46%, suggesting that rhizosphere respiration was slightly more sensitive to flooding than heterotrophic respiration.

Improving the accuracy of the gradient method for determining soil carbon dioxide efflux

USDA-ARS?s Scientific Manuscript database

Continuous soil CO2 efflux (Fsoil) estimates can be obtained by the gradient method (GM), but the utility of the method is hindered by uncertainties in the application of published models for the diffusion coefficient (Ds). We compared two in-situ methods for determining Ds, one based calibrating th...

Seventeen years of monitoring diffuse CO2 emission from the Tenerife North-West Rift Zone (NWRZ) volcano, Canary Islands

NASA Astrophysics Data System (ADS)

Padilla, Germán D.; Evans, Bethany J.; Provis, Aaron R.; Asensio, María; Alonso, Mar; Calvo, David; Hernández, Pedro; Pérez, Nemesio M.

2017-04-01

Tenerife together and Gran Canaria are the central islands of the Canarian archipelago, which have developed a central volcanic complex characterized by the eruption of differentiated magmas. Tenerife is the largest of the Canary Islands (2100 km2) and at present, the North-West Rift-Zone (NWRZ) is one of the most active volcanic structures of the three volcanic rift-zone of the island, which has hosted two historical eruptions (Arenas Negras in 1706 and Chinyero in 1909). In order to monitor the volcanic activity of NWRZ, since the year 2000, 49 soil CO2 efflux surveys have been performed at NWRZ (more than 300 observation sites each one) to evaluate the temporal an spatial variations of CO2 efflux and their relationships with the volcanic-seismic activity. Measurements were performed in accordance with the accumulation chamber method. Spatial distribution maps were constructed following the sequential Gaussian simulation (sGs) procedure. To quantify the total CO2 emission from the studied area, 100 simulations for each survey have been performed. We report herein the results of the last diffuse CO2 efflux surveys at the NWRZ undertaken in July and October 2016 to constrain the total CO2 output from the studied area. During July and October 2016 surveys, soil CO2 efflux values ranged from non-detectable up to 32.4 and 53.7 g m-2 d-1, respectively. The total diffuse CO2 output released to atmosphere were estimated at 255 ± 9 and 338 ± 18 t d-1, respectively, values higher than the background CO2 emission estimated on 144 t d-1. Since 2000, soil CO2 efflux values have ranged from non-detectable up to 141 g m-2 d-1, with the highest values measured in May 2005 whereas total CO2 output ranged between 52 and 867 t d-1. Long-term variations in the total CO2 output have shown a temporal correlation with the onsets of seismic activity at Tenerife, supporting unrest of the volcanic system, as is also suggested by anomalous seismic activity recorded in the studied area during April 22-29, 2004 and also during October 2-3, 2016. Spatial distribution of soil CO2 efflux values also showed changes in magnitude and amplitude, with higher CO2 efflux values measured along a trending WNW-ESE zone. Subsurface magma movement is proposed as a cause for the observed changes in the total output of diffuse CO2 emission as well as for the spatial distribution of soil CO2 efflux. The increasing trend of total CO2 output suggests increasing pressurization of the volcanic-hydrothermal system, a mechanism capable of triggering dyke intrusion along the NWRZ of Tenerife in the near future or futures changes in the seismicity. This study demonstrates the importance of performing soil CO2 efflux surveys as an effective surveillance volcanic tool.

Precursory diffuse CO2 and H2S emission signatures of the 2011-2012 El Hierro submarine eruption, Canary Islands

NASA Astrophysics Data System (ADS)

Pérez, Nemesio M.; Padilla, Germán D.; Padrón, Eleazar; Hernández, Pedro A.; Melián, Gladys V.; Barrancos, José; Dionis, Samara; Nolasco, Dácil; Rodríguez, Fátima; Calvo, David; Hernández, Íñigo

2012-08-01

On October 12, 2011, a submarine eruption began 2 km off the coast of La Restinga, south of El Hierro Island. CO2 and H2S soil efflux were continuously measured during the period of volcanic unrest by using the accumulation chamber method at two different geochemical stations, HIE01 and HIE07. Recorded CO2 and H2S effluxes showed precursory signals that preceded the submarine eruption. Beginning in late August, the CO2 efflux time series started increasing at a relatively constant rate over one month, reaching a maximum of 19 gm-2d-1 one week before the onset of the submarine volcanic eruption. The H2S efflux time series at HIE07 showed a pulse in H2S emission just one day before the initiation of the submarine eruption, reaching peak values of 42 mg m-2 d-1, 10 times the average H2S efflux recorded during the observation period. Since CO2 and H2S effluxes are strongly influenced by external factors, we applied a multiple regression analysis to remove their contribution. A statistical analysis showed that the long-term trend of the filtered data is well correlated with the seismic energy. We find that these geochemical stations are important monitoring sites for evaluating the volcanic activity of El Hierro and that they demonstrate the potential of applying continuous monitoring of soil CO2 and H2S efflux to improve and optimize the detection of early warning signals of future volcanic unrest episodes at El Hierro. Continuous diffuse degassing studies would likely prove useful for monitoring other volcanoes during unrest episodes.

Differential soil respiration responses to changing hydrologic regimes

Treesearch

Vincent J. Pacific; Brian L. McGlynn; Diego A. Riveros-Iregui; Howard E. Epstein; Daniel L. Welsch

2009-01-01

Soil respiration is tightly coupled to the hydrologic cycle (i.e., snowmelt and precipitation timing and magnitude). We examined riparian and hillslope soil respiration across a wet (2005) and a dry (2006) growing season in a subalpine catchment. When comparing the riparian zones, cumulative CO2 efflux was 33% higher, and peak efflux occurred 17 days earlier during the...

Contrasting responses to drought of forest floor CO2 efflux in a loblolly pine plantation and a nearby Oak-Hickory forest

Treesearch

S. Palmroth; Chris A. Maier; Heather R. McCarthy; A. C. Oishi; H. S. Kim; Kurt H. Johnsen; Gabrial G. Katul; Ram Oren

2005-01-01

Forest floor C02 efflux (Fff) depends on vegetation type, climate, and soil physical properties. We assessed the effects of biological factors on Fff by comparing a maturing pine plantation (PP) and a nearby mature Oak-Hickory-type hardwood forest (HW). Fff was measured...

Seasonal Variability in Vadose zone biodegradation at a crude oil pipeline rupture site

USGS Publications Warehouse

Sihota, Natasha J.; Trost, Jared J.; Bekins, Barbara; Berg, Andrew M.; Delin, Geoffrey N.; Mason, Brent E.; Warren, Ean; Mayer, K. Ulrich

2016-01-01

Understanding seasonal changes in natural attenuation processes is critical for evaluating source-zone longevity and informing management decisions. The seasonal variations of natural attenuation were investigated through measurements of surficial CO2 effluxes, shallow soil CO2 radiocarbon contents, subsurface gas concentrations, soil temperature, and volumetric water contents during a 2-yr period. Surficial CO2 effluxes varied seasonally, with peak values of total soil respiration (TSR) occurring in the late spring and summer. Efflux and radiocarbon data indicated that the fractional contributions of natural soil respiration (NSR) and contaminant soil respiration (CSR) to TSR varied seasonally. The NSR dominated in the spring and summer, and CSR dominated in the fall and winter. Subsurface gas concentrations also varied seasonally, with peak values of CO2 and CH4 occurring in the fall and winter. Vadose zone temperatures and subsurface CO2 concentrations revealed a correlation between contaminant respiration and temperature. A time lag of 5 to 7 mo between peak subsurface CO2 concentrations and peak surface efflux is consistent with travel-time estimates for subsurface gas migration. Periods of frozen soils coincided with depressed surface CO2 effluxes and elevated CO2 concentrations, pointing to the temporary presence of an ice layer that inhibited gas transport. Quantitative reactive transport simulations demonstrated aspects of the conceptual model developed from field measurements. Overall, results indicated that source-zone natural attenuation (SZNA) rates and gas transport processes varied seasonally and that the average annual SZNA rate estimated from periodic surface efflux measurements is 60% lower than rates determined from measurements during the summer.

Respiratory fluxes in a Canary Islands pine forest.

PubMed

Wieser, Gerhard; Gruber, Andreas; Bahn, Michael; Catalá, Enrique; Carrillo, Estefanía; Jiménez, Maria Soledad; Morales, Domingo

2009-03-01

We estimated component and whole-ecosystem CO(2) efflux (R(ECO)) in a Pinus canariensis Chr. Sm. ex DC stand in Tenerife, Canary Islands, an ecotone with strong seasonal changes in soil water availability. From November 2006 to February 2008, we measured foliage, stem and soil CO(2) efflux by chamber techniques. Site-specific CO(2) efflux models obtained from these chamber measurements were then combined with half-hourly measurements of canopy, stem and soil temperature as well as soil water potential, leaf and stem surface area data for scaling up component-specific CO(2) efflux to R(ECO). Integrated over an entire year, R(ECO) was 938 g of C m(-2) in 2007 and comprised the following component fluxes: 77% from soil, 11% from stems and 12% from foliage. Whole-ecosystem CO(2) efflux varied markedly throughout the year. During the cold and wet season, R(ECO) generally followed the seasonal trends in temperature, and during the warm and dry summer, however, R(ECO) was significantly reduced because of limited soil water availability in the main rooting horizon.

Temporal and Spatial Variations in Soil CO2 Effluxes of Different Ecosystems

NASA Astrophysics Data System (ADS)

Liang, N.; Kim, S.; Shimoyama, K.; Kim, Y.; Hirano, T.; Takagi, K.; Suto, H.; Fujinuma, Y.; Inoue, G.

2005-12-01

Regional networks for measuring carbon sequestration or loss by terrestrial ecosystems on a year round basis have been in operation since the mid-1990s. However, continuous measurements of soil CO2 efflux, the largest component of ecosystem respiration have only been reported over similar time scales at a few of the sites. Reasons include the lack of automated measurement systems that are commercially available, and the need for frequent servicing to ensure accurate measurements. We have developed a multichannel automated chamber system that can be used for continuous measuring soil CO2 efflux during snow-free seasons. We installed the chamber systems in boreal forest in Alaska, tundra in west Siberia, temperate and cool-temperate forests in Japan and Korea, tropical seasonal forest in Thailand, and tropical rainforest in Malaysia. Annual soil CO2 efflux were measured to be about 5-6 tC ha-1 y-1 in the boreal and cool-temperate forests, 10 tC ha-1 y-1 in the temperate forests, and 26 tC ha-1 y-1 in the tropical rainforests. Efflux showed significant seasonality in the boreal and temperate forest that corresponding with the seasonal soil temperature. However, the wavelike efflux rates in the tropical forests were correlated with the seasonality of soil moisture. Soil CO2 efflux of forest ecosystems showed large spatial variation and was correlated with vegetation type and the chamber size.

Autotrophic and heterotrophic soil respiration determined with trenching, soil CO2 fluxes and 13CO2/12CO2 concentration gradients in a boreal forest ecosystem

NASA Astrophysics Data System (ADS)

Pumpanen, Jukka; Shurpali, Narasinha; Kulmala, Liisa; Kolari, Pasi; Heinonsalo, Jussi

2017-04-01

Soil CO2 efflux forms a substantial part of the ecosystem carbon balance, and it can contribute more than half of the annual ecosystem respiration. Recently assimilated carbon which has been fixed in photosynthesis during the previous days plays an important role in soil CO2 efflux, and its contribution is seasonally variable. Moreover, the recently assimilated C has been shown to stimulate the decomposition of recalcitrant C in soil and increase the mineralization of nitrogen, the most important macronutrient limiting gross primary productivity (GPP) in boreal ecosystems. Podzolic soils, typical in boreal zone, have distinctive layers with different biological and chemical properties. The biological activity in different soil layers has large seasonal variation due to vertical gradient in temperature, soil organic matter and root biomass. Thus, the source of CO2 and its components have a vertical gradient which is seasonally variable. The contribution of recently assimilated C and its seasonal as well as spatial variation in soil are difficult to assess without disturbing the system. The most common method of partitioning soil respiration into its components is trenching which entails the roots being cut or girdling where the flow of carbohydrates from the canopy to roots has been isolated by cutting of the phloem. Other methods for determining the contribution of autotrophic (Ra) and heterotrophic (Rh) respiration components in soil CO2 efflux are pulse labelling with 13CO2 or 14CO2 or the natural abundance of 13C and/or 14C isotopes. Also differences in seasonal and short-term temperature response of soil respiration have been used to separate Ra and Rh. We compared the seasonal variation in Ra and Rh using the trenching method and differences between seasonal and short-term temperature responses of soil respiration. I addition, we estimated the vertical variation in soil biological activity using soil CO2 concentration and the natural abundance of 13C and 12C in CO2 in different soil layers in a boreal forest in Southern Finland and compared them to seasonal variation in GPP. Our results show that Ra followed a seasonal variation in GPP with a time lag of about 2 weeks. The contribution of Ra on soil CO2 efflux was largest in July and August. There was also a distinct seasonal pattern in the vertical distribution of soil CO2 concentration and the abundances of natural isotopes 13C/12C in soil CO2 which reflected the changes in biological activity in the soil profile. Our results indicate that all methods were able to distinguish seasonal variability in Ra and Rh. The soil CO2 gradient method was able to reproduce the temporal variation in soil CO2 effluxes relatively well when compared to those measured with chambers. However, variation in soil moisture also causes significant variation in soil air CO2 concentrations which interferes with the variation resulted from soil temperatures and belowground allocation of carbon from recent photosynthate. Also, the assumptions used in gradient method calculations, such as soil porosity and transport distances have to be taken into account when interpreting the results.

Comparing ecosystem and soil respiration: Review and key challenges of tower-based and soil mesurements

USDA-ARS?s Scientific Manuscript database

The net ecosystem exchange (NEE) is the difference between ecosystem CO2 assimilation and CO2 losses to the atmosphere. Ecosystem respiration (Reco), the efflux of CO2 from the ecosystem to the atmosphere, includes the soil-to-atmosphere carbon flux (i.e., soil respiration; Rsoil) and aboveground pl...

A MIXED MODEL ANALYSIS OF SOIL CO2 EFFLUX AND NIGHT-TIME RESPIRATION RESPONSES TO ELEVATED CO2 AND TEMPERATURE

EPA Science Inventory

Abstract: We investigated the effects of elevated soil temperature and atmospheric CO2 on soil CO2 efflux and system respiration responses. The study was conducted in sun-lit controlled-environment chambers using two-year-old Douglas-fir seedlings grown in reconstructed litter-so...

DOES SOIL CO2 EFFLUX ACCLIMATIZETO ELEVATED TEMPERATURE AND CO2 DURING LONG-TERM TREATMENT OF DOUGLAS-FIR SEEDLINGS?

EPA Science Inventory

We investigated the effects of elevated soil temperature and atmospheric CO2 efflux (SCE) during the third an fourth years of study. We hypothesized that elevated temperature would stimulate SCE, and elevated CO2 would also stimulate SCE with the stimulation being greater at hig...

Contribution of the biological crust to the soil CO2 efflux in a Mediterranean ecosystem

NASA Astrophysics Data System (ADS)

Morillas, Lourdes; Bellucco, Veronica; Lo Cascio, Mauro; Marras, Serena; Spano, Donatella; Mereu, Simone

2016-04-01

Lately, the important role of the soil biological crust (hereafter biocrust) in Mediterranean ecosystems is emerging from a multitude of articles. It is becoming apparent that the biocrust has an important role in regulating ecosystem functions and that it interacts with the woody and herbaceous vegetation to a degree depending on the availability of water among other factors. Here we present the first results of a wider project and focus on the contribution of the biocrust to soil CO2 efflux, and on how the respiration of the biocrust responds to soil water content and temperature. A manipulative experiment was performed in a Mediterranean shrubland ecosystem in Sardinia (Italy) to assess the contribution of the bicocrust to soil CO2 efflux and to identify the main environmental drivers of the CO2 efflux in this ecosystem. For 19 months,in situ soil CO2 efflux was measured over three different surfaces: soil deprived of biocrust (hereafter Soil), biocrust (hereafter BC) and intact soil (hereafter Soil+BC). For these surfaces, three different approaches were used to investigate the dependency of CO2 efflux on soil temperature and soil water content, e.g. a simple linear regression, a multi-linear equation, and a modified version of the most common used Lloyd and Taylor model (Lloyd and Taylor, 1994). Results showed that CO2 effluxes emitted by Soil, BC and Soil+BC were differently driven by soil moisture and temperature: BC respiration was mainly controlled by soil moisture at 5 cm depth, whereas both soil temperature and water content at 20 cm depth determined Soil CO2 efflux. Soil temperature and water content at 5 cm depth drove Soil+BC respiration. We also found that biocrust can contribute substantially (up to 60%) to the total soil respiration depending on its moisture content. This contribution persists even in periods in which deeper soil layers are inactive, as small water pulses can activate lichens, mosses and cyanobacteria associated to the biocrust as well as the metabolism of carbon in soils, while deeper soil layers remain dormant. The important differences observed in CO2 efflux between Soil and Soil+BC suggest that projections on carbon budgets may underestimate soil CO2 efflux in spatially heterogeneous Mediterranean areas. Thus, our results highlight the relevance of accounting for the biocrust contribution to soil respiration and its responses to environmental drivers. The ongoing and planned activities to understand the full complexity of all factors determining respiration in water limited environments are briefly discussed. Lloyd, J., Taylor, J. A., 1994. On the temperature dependence of soil respiration. Funct. Ecol. 8, 315-323.

Dynamics of soil CO 2 efflux under varying atmospheric CO 2 concentrations reveal dominance of slow processes

Treesearch

Dohyoung Kim; Ram Oren; James S. Clark; Sari Palmroth; A. Christopher Oishi; Heather R. McCarthy; Chris A. Maier; Kurt Johnsen

2017-01-01

We evaluated the effect on soil CO2 efflux (FCO2) of sudden changes in photosynthetic rates by altering CO2 concentration in plots subjected to +200 ppmv for 15 years. Five-day intervals of exposure to elevated CO2 (eCO2) ranging 1.0–1.8 times ambient did not affect FCO2. FCO2 did not decrease until 4 months after termination of the long-term eCO2 treatment, longer...

Soil properties differently influence estimates of soil CO2 efflux from three chamber-based measurement systems

Treesearch

John R. Butnor; Kurt H. Johnsen; Chris A. Maier

2005-01-01

Soil C02 efflux is a major component of net ecosystem productivity (NEP) of forest systems. Combining data from multiple researchers for larger-scale modeling and assessment will only be valid if their methodologies provide directly comparable results. We conducted a series of laboratory and field tests to assess the presence and magnitude of...

Diffuse Carbon Dioxide Degassing Monitoring at Santa Ana-Izalco-Coatepeque Volcanic System, El Salvador, Central America

NASA Astrophysics Data System (ADS)

Olmos, R.; Barahona, F.; Cartagena, R.; Soriano, T.; Salazar, J.; Hernandez, P.; Perez, N.; Notsu, K.; Lopez, D.

2001-12-01

Santa Ana volcanic complex (0.22 Ma), located 40 Km west of San Salvador, comprises Santa Ana, Izalco, and Cerro Verde stratovolcanoes, the Coatepeque collapse caldera, as well as several cinder cones and explosion craters. Most recent activity has occurred at Izalco (1966) and Santa Ana which shows a permanent acidic crater lake with an intense fumarolic activity. In addition, Santa Ana exhibits a SO2-rich rising plume though no local seismicity has been reported. Weak fumarolic activity is also present at two locations within the Santa Ana volcanic complex: the summit crater of Izalco and Cerro Pacho at Coatepeque caldera. Other important structural features of this volcanic complex are two fault/fissure systems running NNW-SSE that can be identified by the alignment of the stratovolcanoes and numerous cinder cones and explosion craters. In January 2001, a 7.6 magnitude earthquake occurred about 150 Km SE of Santa Ana volcano. A soil gas and CO2 efflux survey was performed to evaluate the impact of this seismic event upon the diffuse degassing rates in Santa Ana volcanic complex in March 2001. A total of 450 soil gas and diffuse CO2 efflux measurements were carried out covering an area of 209.5 Km2. CO2 efflux ranged from non-detectable values to 293 gm-2d-1, with a median of 8.9 gm-2d-1 and an upper quartile of 5.2 gm-2d-1. The CO2 efflux spatial distribution reveals the existence of areas with CO2 efflux higher than 60 gm-2d-1 associated to the fault/fissure systems of NNW-SSE orientation. One of these areas, Cerro Pacho, was selected for the continuous monitoring of diffuse CO2 efflux in late May 2001. Secular variations of diffuse CO2 efflux ranged from 27.4 to 329 gm-2d-1 with a median of 130 gm-2d-1 and a quartile range of 59.3 gm-2d-1. An increasing trend of 43 gm-2d-1 was observed between May and August 2001 overlapped to high-frequency minor fluctuations related to meteorological variables' changes. However, a larger observation time-span is needed to understand the influence of the rainy-season and meteorological parameters in the observed CO2 efflux time series.

Greenhouse gas emissions are enhanced by wastewater discharge into New York City coastal estuaries

NASA Astrophysics Data System (ADS)

Brigham, B. A.; O'Mullan, G. D.; Bird, J. A.

2016-12-01

The Hudson River Estuary (HRE) receives significant inputs of untreated wastewater from sewer overflow from New York City (NYC) and other urban areas. These inputs deliver large, concentrated pulses of carbon (C) and nitrogen (N) into the estuary primarily during storm events. We hypothesized that sewage inputs would increase carbon dioxide (CO2) and methane (CH4) efflux from the HRE via two mechanism: (1) direct input of these gases into estuarine surface waters from NYC's wastewater treatment system; and (2) indirect in-situ microbial production in response to the C and N additions. To test these hypotheses, CO2, CH4, dissolved organic C and inorganic N concentrations were measured in both sewage outflow and in estuarine waters. Efflux of CO2 and CH4 were also quantified from sediment cores sampled from Flushing Bay (FB), which is in close proximity to sewage delivery outlets. Wastewater discharge was found to be both a direct input in wastewater and an indirect source of CO2 and CH4 via microbial respiration. Effluent concentrations of CH4 (125 ppm), CO2 (2200 ρCO2), dissolved organic C, ammonium, and nitrate surface water concentrations, were a minimum of 3 times greater than in estuarine surface water adjacent to the sewage delivery area and up to 20 times greater than concentrations found in regional HRE surface waters. Incubation experiments with FB sediment demonstrated that acetate additions stimulated CO2 efflux by + 1.25 and CH4 efflux by +10 times, compared with unamended controls. The magnitude of CH4 produced was +40 times greater than from sediments incubated from a non-sewage affected area with similar salinity levels. However, total C mineralization (6 µg C day-1 g-1 of dry soil) was a small portion of the C amendment indicating negligible priming. These data warrant study on larger regional scales to assess the broader climate impact likely driven by CH4 efflux that results from discharge of untreated wastewater into urban estuaries.

Inversely Estimating the Vertical Profile of the Soil CO2 Production Rate in a Deciduous Broadleaf Forest Using a Particle Filtering Method

PubMed Central

Sakurai, Gen; Yonemura, Seiichiro; Kishimoto-Mo, Ayaka W.; Murayama, Shohei; Ohtsuka, Toshiyuki; Yokozawa, Masayuki

2015-01-01

Carbon dioxide (CO2) efflux from the soil surface, which is a major source of CO2 from terrestrial ecosystems, represents the total CO2 production at all soil depths. Although many studies have estimated the vertical profile of the CO2 production rate, one of the difficulties in estimating the vertical profile is measuring diffusion coefficients of CO2 at all soil depths in a nondestructive manner. In this study, we estimated the temporal variation in the vertical profile of the CO2 production rate using a data assimilation method, the particle filtering method, in which the diffusion coefficients of CO2 were simultaneously estimated. The CO2 concentrations at several soil depths and CO2 efflux from the soil surface (only during the snow-free period) were measured at two points in a broadleaf forest in Japan, and the data were assimilated into a simple model including a diffusion equation. We found that there were large variations in the pattern of the vertical profile of the CO2 production rate between experiment sites: the peak CO2 production rate was at soil depths around 10 cm during the snow-free period at one site, but the peak was at the soil surface at the other site. Using this method to estimate the CO2 production rate during snow-cover periods allowed us to estimate CO2 efflux during that period as well. We estimated that the CO2 efflux during the snow-cover period (about half the year) accounted for around 13% of the annual CO2 efflux at this site. Although the method proposed in this study does not ensure the validity of the estimated diffusion coefficients and CO2 production rates, the method enables us to more closely approach the “actual” values by decreasing the variance of the posterior distribution of the values. PMID:25793387

Soil C02 efflux across four age classes of plantation loblolly pine (Pinus taeda L.) on the Virginia Piedmont

Treesearch

P. Eric Wiseman; John R. Seiler

2004-01-01

Soil CO2 efflux resulting from microbial and root respiration is a major component of the forest C cycle. In this investigation, we examined in detail how soil CO2 efflux differs both spatially and temporally with respect to stand age for loblolly pine (Pinus taeda L.) plantations on the Virginia Piedmont...

Carbon Dioxide Flux from Rice Paddy Soils in Central China: Effects of Intermittent Flooding and Draining Cycles

PubMed Central

Liu, Yi; Wan, Kai-yuan; Tao, Yong; Li, Zhi-guo; Zhang, Guo-shi; Li, Shuang-lai; Chen, Fang

2013-01-01

A field experiment was conducted to (i) examine the diurnal and seasonal soil carbon dioxide (CO2) fluxes pattern in rice paddy fields in central China and (ii) assess the role of floodwater in controlling the emissions of CO2 from soil and floodwater in intermittently draining rice paddy soil. The soil CO2 flux rates ranged from −0.45 to 8.62 µmol.m−2.s−1 during the rice-growing season. The net effluxes of CO2 from the paddy soil were lower when the paddy was flooded than when it was drained. The CO2 emissions for the drained conditions showed distinct diurnal variation with a maximum efflux observed in the afternoon. When the paddy was flooded, daytime soil CO2 fluxes reversed with a peak negative efflux just after midday. In draining/flooding alternating periods, a sudden pulse-like event of rapidly increasing CO2 efflux occured in response to re-flooding after draining. Correlation analysis showed a negative relation between soil CO2 flux and temperature under flooded conditions, but a positive relation was found under drained conditions. The results showed that draining and flooding cycles play a vital role in controlling CO2 emissions from paddy soils. PMID:23437170

Climate change interactions affect soil carbon dioxide efflux and microbial functioning in a post-harvest forest.

PubMed

McDaniel, M D; Kaye, J P; Kaye, M W; Bruns, M A

2014-04-01

Forest disturbances, including whole-tree harvest, will increase with a growing human population and its rising affluence. Following harvest, forests become sources of C to the atmosphere, partly because wetter and warmer soils (relative to pre-harvest) increase soil CO2 efflux. This relationship between soil microclimate and CO2 suggests that climate changes predicted for the northeastern US may exacerbate post-harvest CO2 losses. We tested this hypothesis using a climate-manipulation experiment within a recently harvested northeastern US forest with warmed (H; +2.5 °C), wetted (W; +23% precipitation), warmed + wetted (H+W), and ambient (A) treatments. The cumulative soil CO2 effluxes from H and W were 35% (P = 0.01) and 22% (P = 0.07) greater than A. However, cumulative efflux in H+W was similar to A and W, and 24% lower than in H (P = 0.02). These findings suggest that with higher precipitation soil CO2 efflux attenuates rapidly to warming, perhaps due to changes in substrate availability or microbial communities. Microbial function measured as CO2 response to 15 C substrates in warmed soils was distinct from non-warmed soils (P < 0.001). Furthermore, wetting lowered catabolic evenness (P = 0.04) and fungi-to-bacteria ratios (P = 0.03) relative to non-wetted treatments. A reciprocal transplant incubation showed that H+W microorganisms had lower laboratory respiration on their home soils (i.e., home substrates) than on soils from other treatments (P < 0.01). We inferred that H+W microorganisms may use a constrained suite of C substrates that become depleted in their "home" soils, and that in some disturbed ecosystems, a precipitation-induced attenuation (or suppression) of soil CO2 efflux to warming may result from fine-tuned microbe-substrate linkages.

Geochemical monitoring of the Tenerife North-East Rift Zone (NERZ) volcano (Canary Islands) by means of diffuse CO_{2} degassing surveys

NASA Astrophysics Data System (ADS)

Barrancos, José; O'Neill, Ryan; Gould, Catherine E.; Padilla, Germán; Rodríguez, Fátima; Amonte, Cecilia; Padrón, Eleazar; Pérez, Nemesio M.

2017-04-01

Tenerife is the largest of the Canary Islands (2100 km2) and the North East Rift (NERZ) volcano is one of the three active volcanic rift-zones of the island (210 km2). The last eruptive activity at NERZ volcano occurred in 1704 and 1705, with three volcanic eruptions: Siete Fuentes, Fasnia and Arafo. In order to provide a multidisciplinary approach to monitor potential volcanic activity changes at the NERZ volcano, diffuse CO2 emission surveys have been undertaken in a yearly basis since 2001. This study shows the results of the last soil CO2 efflux survey undertaken in summer 2016, with 600 soil gas sampling sites homogenously distributed. Soil CO2 efflux measurements were performed at the surface environment by means of a portable non-dispersive infrared spectrophotometer (NDIR) LICOR Li800 following the accumulation chamber method. Soil CO2 efflux values ranged from non-detectable (˜0.5 g m-2 d-1) up to 70 g m-2 d-1, with an average value of 8.8 g m-2 d-1. In order to distinguish the existence of different geochemical populations on the soil CO2 efflux data, a Sinclair graphical analysis was done. The average value of background population was 2.9 g m-2 d-1 and that of peak population was 67.8 g m-2 d-1, value that has been increasing since the year 2014. To quantify the total CO2 emission rate from the NERZ volcano a sequential Gaussian simulation (sGs) was used as interpolation method to construct soil CO2 emission contour maps. The diffuse CO2 emission rate for the studied area was estimated in 1,675 ± 47 t d-1. If we compare the 2016 results with those ones obtained in previous surveys since 2001, two main pulses on diffuse CO2 emission are identified, the first one in 2007 and the second one between during 2014 and 2016. This long-term variation on the diffuse CO2 emission doesn't seem to be masked by the external-meteorological variations. However, the first peak precedes the anomalous seismicity recorded in and around Tenerife Island between 2009 and 2011, suggesting changes in strain-stress at depth as a possible cause of the observed changes in the diffuse CO2 emission rate. On the other hand, the second peak seems to be related to later changes in the seismicity, such as the seismic activity that occurred in Tenerife at the end of 2016. Again, this study demonstrates the importance of studies of soil CO2 efflux at the NERZ volcano of Tenerife island as an effective volcanic monitoring tool.

Carbon dioxide efflux from soil with poultry litter applications in conventional and conservation tillage systems in northern Alabama.

PubMed

Roberson, T; Reddy, K C; Reddy, S S; Nyakatawa, E Z; Raper, R L; Reeves, D W; Lemunyon, J

2008-01-01

Increased CO2 release from soils resulting from agricultural practices such as tillage has generated concerns about contributions to global warming. Maintaining current levels of soil C and/or sequestering additional C in soils are important mechanisms to reduce CO2 in the atmosphere through production agriculture. We conducted a study in northern Alabama from 2003 to 2006 to measure CO2 efflux and C storage in long-term tilled and non-tilled cotton (Gossypium hirsutum L.) plots receiving poultry litter or ammonium nitrate (AN). Treatments were established in 1996 on a Decatur silt loam (clayey, kaolinitic thermic, Typic Paleudults) and consisted of conventional-tillage (CT), mulch-tillage (MT), and no-tillage (NT) systems with winter rye [Secale cereale (L.)] cover cropping and AN and poultry litter (PL) as nitrogen sources. Cotton was planted in 2003, 2004, and 2006. Corn was planted in 2005 as a rotation crop using a no-till planter in all plots, and no fertilizer was applied. Poultry litter application resulted in higher CO2 emission from soil compared with AN application regardless of tillage system. In 2003 and 2006, CT (4.39 and 3.40 micromol m(-2) s(-1), respectively) and MT (4.17 and 3.39 micromol m(-2) s(-1), respectively) with PL at 100 kg N ha(-1) (100 PLN) recorded significantly higher CO2 efflux compared with NT with 100 PLN (2.84 and 2.47 micromol m(-2) s(-1), respectively). Total soil C at 0- to 15-cm depth was not affected by tillage but significantly increased with PL application and winter rye cover cropping. In general, cotton produced with NT conservation tillage in conjunction with PL and winter rye cover cropping reduced CO2 emissions and sequestered more soil C compared with control treatments.

Sustained effects of atmospheric [CO2] and nitrogen availability on forest soil CO2 efflux

Treesearch

A. Christopher Oishi; Sari Palmroth; Kurt H. Johnsen; Heather R. McCarthy; Ram Oren

2014-01-01

Soil CO2 efflux (Fsoil) is the largest source of carbon from forests and reflects primary productivity as well as how carbon is allocated within forest ecosystems. Through early stages of stand development, both elevated [CO2] and availability of soil nitrogen (N; sum of mineralization, deposition, and fixation) have been shown to increase gross primary productivity,...

Large CO 2 effluxes at night and during synoptic weather events significantly contribute to CO 2 emissions from a reservoir

DOE PAGES

Liu, Heping; Zhang, Qianyu; Katul, Gabriel G.; ...

2016-05-24

CO 2 emissions from inland waters are commonly determined by indirect methods that are based on the product of a gas transfer coefficient and the concentration gradient at the air water interface (e.g., wind-based gas transfer models). The measurements of concentration gradient are typically collected during the day in fair weather throughout the course of a year. Direct measurements of eddy covariance CO 2 fluxes from a large inland water body (Ross Barnett reservoir, Mississippi, USA) show that CO 2 effluxes at night are approximately 70% greater than those during the day. At longer time scales, frequent synoptic weather eventsmore » associated with extratropical cyclones induce CO 2 flux pulses, resulting in further increase in annual CO 2 effluxes by 16%. Therefore, CO 2 emission rates from this reservoir, if these diel and synoptic processes are under-sampled, are likely to be underestimated by approximately 40%. Our results also indicate that the CO 2 emission rates from global inland waters reported in the literature, when based on indirect methods, are likely underestimated. Field samplings and indirect modeling frameworks that estimate CO 2 emissions should account for both daytime-nighttime efflux difference and enhanced emissions during synoptic weather events. Furthermore, the analysis here can guide carbon emission sampling to improve regional carbon estimates.« less

Large CO 2 effluxes at night and during synoptic weather events significantly contribute to CO 2 emissions from a reservoir

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Heping; Zhang, Qianyu; Katul, Gabriel G.

CO 2 emissions from inland waters are commonly determined by indirect methods that are based on the product of a gas transfer coefficient and the concentration gradient at the air water interface (e.g., wind-based gas transfer models). The measurements of concentration gradient are typically collected during the day in fair weather throughout the course of a year. Direct measurements of eddy covariance CO 2 fluxes from a large inland water body (Ross Barnett reservoir, Mississippi, USA) show that CO 2 effluxes at night are approximately 70% greater than those during the day. At longer time scales, frequent synoptic weather eventsmore » associated with extratropical cyclones induce CO 2 flux pulses, resulting in further increase in annual CO 2 effluxes by 16%. Therefore, CO 2 emission rates from this reservoir, if these diel and synoptic processes are under-sampled, are likely to be underestimated by approximately 40%. Our results also indicate that the CO 2 emission rates from global inland waters reported in the literature, when based on indirect methods, are likely underestimated. Field samplings and indirect modeling frameworks that estimate CO 2 emissions should account for both daytime-nighttime efflux difference and enhanced emissions during synoptic weather events. Furthermore, the analysis here can guide carbon emission sampling to improve regional carbon estimates.« less

Relationships between stem CO2 efflux, substrate supply, and growth in young loblolly pine trees

Treesearch

Chris A. Maier; Kurt H. Johnsen; Barton D. Clinton; Kim H. Ludovici

2009-01-01

We examined the relationships between stem CO2 efflux (Es), diametergrowth, and nonstructural carbohydrate concentration in loblolly pine trees. Carbohydratesupply was altered via stem girdling during rapid stem growth in the

The partitioning of litter carbon during litter decomposition under different rainfall patterns: a laboratory study

NASA Astrophysics Data System (ADS)

Yang, X.; Szlavecz, K. A.; Langley, J. A.; Pitz, S.; Chang, C. H.

2017-12-01

Quantifying litter C into different C fluxes during litter decomposition is necessary to understand carbon cycling under changing climatic conditions. Rainfall patterns are predicted to change in the future, and their effects on the fate of litter carbon are poorly understood. Soils from deciduous forests in Smithsonian Environmental Research Center (SERC) in Maryland, USA were collected to reconstruct soil columns in the lab. 13C labeled tulip poplar leaf litter was used to trace carbon during litter decomposition. Top 1% and the mean of 15-minute historical precipitation data from nearby weather stations were considered as extreme and control rainfall intensity, respectively. Both intensity and frequency of rainfall were manipulated, while the total amount was kept constant. A pulse of CO2 efflux was detected right after each rainfall event in the soil columns with leaf litter. After the first event, CO2 efflux of the control rainfall treatment soils increased to threefold of the CO2 efflux before rain event and that of the extreme treatment soils increased to fivefold. However, in soils without leaf litter, CO2 efflux was suppressed right after rainfall events. After each rainfall event, the leaf litter contribution to CO2 efflux first showed an increase, decreased sharply in the following two days, and then stayed relatively constant. In soil columns with leaf litter, the order of cumulative CO2 efflux was control > extreme > intermediate. The order of cumulative CO2 efflux in the bare soil treatment was extreme > intermediate > control. The order of volume of leachate from different treatments was extreme > intermediate > control. Our initial results suggest that more intense rainfall events result in larger pulses of CO2, which is rarely measured in the field. Additionally, soils with and without leaf litter respond differently to precipitation events. This is important to consider in temperate regions where leaf litter cover changes throughout the year. Including the rainfall pattern as a parameter to the partitioning of litter carbon could help better project soil carbon cycling in the Mid-Atlantic region.

Seasonal patterns in soil surface CO2 flux under snow cover in 50 and 300 year old subalpine forests

Treesearch

Robert M. Hubbard; Michael G. Ryan; Kelly Elder; Charles C. Rhoades

2005-01-01

Soil CO2 flux can contribute as much as 60-80% of total ecosystem respiration in forests. Although considerable research has focused on quantifying this flux during the growing season, comparatively little effort has focused on non-growing season fluxes. We measured soil CO2 efflux through snow in 50 and 300 year old subalpine forest stands near Fraser CO. Our...

Biochar has no effect on soil respiration across Chinese agricultural soils.

PubMed

Liu, Xiaoyu; Zheng, Jufeng; Zhang, Dengxiao; Cheng, Kun; Zhou, Huimin; Zhang, Afeng; Li, Lianqing; Joseph, Stephen; Smith, Pete; Crowley, David; Kuzyakov, Yakov; Pan, Genxing

2016-06-01

Biochar addition to soil has been widely accepted as an option to enhance soil carbon sequestration by introducing recalcitrant organic matter. However, it remains unclear whether biochar will negate the net carbon accumulation by increasing carbon loss through CO2 efflux from soil (soil respiration). The objectives of this study were to address: 1) whether biochar addition increases soil respiration; and whether biochar application rate and biochar type (feedstock and pyrolyzing system) affect soil respiration. Two series of field experiments were carried out at 8 sites representing the main crop production areas in China. In experiment 1, a single type of wheat straw biochar was amended at rates of 0, 20 and 40 tha(-1) in four rice paddies and three dry croplands. In experiment 2, four types of biochar (varying in feedstock and pyrolyzing system) were amended at rates of 0 and 20 tha(-1) in a rice paddy under rice-wheat rotation. Results showed that biochar addition had no effect on CO2 efflux from soils consistently across sites, although it increased topsoil organic carbon stock by 38% on average. Meanwhile, CO2 efflux from soils amended with 40 t of biochar did not significantly higher than soils amended with 20 t of biochar. While the biochars used in Experiment 2 had different carbon pools and physico-chemical properties, they had no effect on soil CO2 efflux. The soil CO2 efflux following biochar addition could be hardly explained by the changes in soil physic-chemical properties and in soil microbial biomass. Thus, we argue that biochar will not negate the net carbon accumulation by increasing carbon loss through CO2 efflux in agricultural soils. Copyright © 2016. Published by Elsevier B.V.

Coenzyme Q1 redox metabolism during passage through the rat pulmonary circulation and the effect of hyperoxia

PubMed Central

Audi, Said H.; Merker, Marilyn P.; Krenz, Gary S.; Ahuja, Taniya; Roerig, David L.; Bongard, Robert D.

2008-01-01

The objective was to evaluate the pulmonary disposition of the ubiquinone homolog coenzyme Q1 (CoQ1) on passage through lungs of normoxic (exposed to room air) and hyperoxic (exposed to 85% O2 for 48 h) rats. CoQ1 or its hydroquinone (CoQ1H2) was infused into the arterial inflow of isolated, perfused lungs, and the venous efflux rates of CoQ1H2 and CoQ1 were measured. CoQ1H2 appeared in the venous effluent when CoQ1 was infused, and CoQ1 appeared when CoQ1H2 was infused. In normoxic lungs, CoQ1H2 efflux rates when CoQ1 was infused decreased by 58 and 33% in the presence of rotenone (mitochondrial complex I inhibitor) and dicumarol [NAD(P)H-quinone oxidoreductase 1 (NQO1) inhibitor], respectively. Inhibitor studies also revealed that lung CoQ1H2 oxidation was via mitochondrial complex III. In hyperoxic lungs, CoQ1H2 efflux rates when CoQ1 was infused decreased by 23% compared with normoxic lungs. Based on inhibitor effects and a kinetic model, the effect of hyperoxia could be attributed predominantly to 47% decrease in the capacity of complex I-mediated CoQ1 reduction, with no change in the other redox processes. Complex I activity in lung homogenates was also lower for hyperoxic than for normoxic lungs. These studies reveal that lung complexes I and III and NQO1 play a dominant role in determining the vascular concentration and redox status of CoQ1 during passage through the pulmonary circulation, and that exposure to hyperoxia decreases the overall capacity of the lung to reduce CoQ1 to CoQ1H2 due to a depression in complex I activity. PMID:18703762

Coenzyme Q1 redox metabolism during passage through the rat pulmonary circulation and the effect of hyperoxia.

PubMed

Audi, Said H; Merker, Marilyn P; Krenz, Gary S; Ahuja, Taniya; Roerig, David L; Bongard, Robert D

2008-10-01

The objective was to evaluate the pulmonary disposition of the ubiquinone homolog coenzyme Q(1) (CoQ(1)) on passage through lungs of normoxic (exposed to room air) and hyperoxic (exposed to 85% O(2) for 48 h) rats. CoQ(1) or its hydroquinone (CoQ(1)H(2)) was infused into the arterial inflow of isolated, perfused lungs, and the venous efflux rates of CoQ(1)H(2) and CoQ(1) were measured. CoQ(1)H(2) appeared in the venous effluent when CoQ(1) was infused, and CoQ(1) appeared when CoQ(1)H(2) was infused. In normoxic lungs, CoQ(1)H(2) efflux rates when CoQ(1) was infused decreased by 58 and 33% in the presence of rotenone (mitochondrial complex I inhibitor) and dicumarol [NAD(P)H-quinone oxidoreductase 1 (NQO1) inhibitor], respectively. Inhibitor studies also revealed that lung CoQ(1)H(2) oxidation was via mitochondrial complex III. In hyperoxic lungs, CoQ(1)H(2) efflux rates when CoQ(1) was infused decreased by 23% compared with normoxic lungs. Based on inhibitor effects and a kinetic model, the effect of hyperoxia could be attributed predominantly to 47% decrease in the capacity of complex I-mediated CoQ(1) reduction, with no change in the other redox processes. Complex I activity in lung homogenates was also lower for hyperoxic than for normoxic lungs. These studies reveal that lung complexes I and III and NQO1 play a dominant role in determining the vascular concentration and redox status of CoQ(1) during passage through the pulmonary circulation, and that exposure to hyperoxia decreases the overall capacity of the lung to reduce CoQ(1) to CoQ(1)H(2) due to a depression in complex I activity.

Root-derived CO2 efflux via xylem stream rivals soil CO2 efflux

Treesearch

Doug P. Aubrey; Robert O. Teskey

2009-01-01

Respiration consumes a large portion of annual gross primary productivity in forest ecosystems and is dominated by belowground metabolism. Here, we present evidence of a previously unaccounted for internal CO2 flux of large magnitude from tree roots through stems. If this pattern is shown to persist over time and in other forests, it suggests...

Dynamics of carbon dioxide emission at Mammoth Mountain, California

USGS Publications Warehouse

Rogie, J.D.; Kerrick, Derrill M.; Sorey, M.L.; Chiodini, G.; Galloway, D.L.

2001-01-01

Mammoth Mountain, a dormant volcano in the eastern Sierra Nevada, California, has been passively degassing large quantities of cold magmatic CO2 since 1990 following a 6-month-long earthquake swarm associated with a shallow magmatic intrussion in 1989. A search for any link between gas discharge and volcanic hazard at this popular recreation area led us to initiate a detailed study of the degassing process in 1997. Our continuous monitoring results elucidate some of the physical controls that influence dynamics in flank CO2 degassing at this volcano. High coherence between variations in CO2 efflux and variations in atmospheric pressure and wind speed imply that meteorological parameters account for much, if not all of the variability in CO2 efflux rates. Our results help explain differences among previously published estimates of CO2 efflux at Mammoth Mountain and indicate that the long-term (annual) CO2 degassing rate has in fact remained constant since ~ 1997. Discounting the possibility of large meteorologically driven temporal variations in gas efflux at other volcanoes may result in spurious interpretations of transients do not reflect actual geologic processes. ?? 2001 Elsevier Science B.V. All rights reserved.

Drought effects on soil CO

NASA Astrophysics Data System (ADS)

van Straaten, O.; Veldkamp, E.; Köhler, M.; Anas, I.

2009-12-01

Climate change induced droughts pose a serious threat to ecosystems across the tropics and sub-tropics, particularly to those areas not adapted to natural dry periods. In order to study the vulnerability of cacao (Theobroma cacao) - Gliricidia sepium agroforestry plantations to droughts a large scale throughfall displacement roof was built in Central Sulawesi, Indonesia. In this 19-month replicated experiment, we measured soil surface CO2 efflux (soil respiration) in three simulated drought plots compared with three adjacent control plots. Soil respiration rates peaked at intermediate soil moisture and decreased under increasingly dry conditions (drought induced), but also decreased when soils became water saturated, as evidenced in control plots. The simulated drought plots exhibited a slight decrease in soil respiration compared to the control plots (average 13% decrease). The strength of the drought effect was spatially variable - while some measurement chamber sites reacted strongly ("responsive") to the decrease in soil water content (up to R2=0.70) (n=11), others did not react at all ("non-responsive") (n=7). The degree of soil CO2 respiration drought response was highest around cacao tree stems and decreased with distance from the stem (R2=0.22). A significant correlation was measured between "responsive" soil respiration chamber sites and sap flux density ratios of cacao (R=0.61) and Gliricidia (R=0.65). Leaf litter CO2 respiration decreased as conditions became drier. During dry periods the litter layer contributed approximately 3-4% of the total CO2 efflux and up to 40% during wet periods. A CO2 flush was recorded during the rewetting phase that lasted for approximately two weeks, during which time accumulated labile carbon stocks mineralized. The net effect on soil CO2 emissions over the duration of the experiment was neutral, control plots respired 11.1±0.5 Mg C ha-1 yr-1, while roof plots respired 10.5±0.5 Mg C ha-1 yr-1.

Impact of grazing intensity on seasonal variations in soil organic carbon and soil CO2 efflux in two semiarid grasslands in southern Botswana

PubMed Central

Thomas, Andrew D.

2012-01-01

Biological soil crusts (BSCs) are an important source of organic carbon, and affect a range of ecosystem functions in arid and semiarid environments. Yet the impact of grazing disturbance on crust properties and soil CO2 efflux remain poorly studied, particularly in African ecosystems. The effects of burial under wind-blown sand, disaggregation and removal of BSCs on seasonal variations in soil CO2 efflux, soil organic carbon, chlorophyll a and scytonemin were investigated at two sites in the Kalahari of southern Botswana. Field experiments were employed to isolate CO2 efflux originating from BSCs in order to estimate the C exchange within the crust. Organic carbon was not evenly distributed through the soil profile but concentrated in the BSC. Soil CO2 efflux was higher in Kalahari Sand than in calcrete soils, but rates varied significantly with seasonal changes in moisture and temperature. BSCs at both sites were a small net sink of C to the soil. Soil CO2 efflux was significantly higher in sand soils where the BSC was removed, and on calcrete where the BSC was buried under sand. The BSC removal and burial under sand also significantly reduced chlorophyll a, organic carbon and scytonemin. Disaggregation of the soil crust, however, led to increases in chlorophyll a and organic carbon. The data confirm the importance of BSCs for C cycling in drylands and indicate intensive grazing, which destroys BSCs through trampling and burial, will adversely affect C sequestration and storage. Managed grazing, where soil surfaces are only lightly disturbed, would help maintain a positive carbon balance in African drylands. PMID:23045706

Seasonal dynamics of soil CO2 efflux and soil profile CO2 concentrations in arboretum of Moscow botanical garden

NASA Astrophysics Data System (ADS)

Goncharova, Olga; Udovenko, Maria; Matyshak, Georgy

2016-04-01

To analyse and predict recent and future climate change on a global scale exchange processes of greenhouse gases - primarily carbon dioxide - over various ecosystems are of rising interest. In order to upscale land-use dependent sources and sinks of CO2, knowledge of the local variability of carbon fluxes is needed. Among terrestrial ecosystems, urban areas play an important role because most of anthropogenic emissions of carbon dioxide originate from these areas. On the other hand, urban soils have the potential to store large amounts of soil organic carbon and, thus, contribute to mitigating increases in atmospheric CO2 concentrations. Research objectives: 1) estimate the seasonal dynamics of carbon dioxide production (emission - closed chamber technique and profile concentration - soil air sampling tubes method) by soils of Moscow State University Botanical Garden Arboretum planted with Picea obovata and Pinus sylvestris, 1) identification the factors that control CO2 production. The study was conducted with 1-2 weeks intervals between October 2013 and November 2015 at two sites. Carbon dioxide soil surface efflux during the year ranged from 0 to 800 mgCO2/(m2hr). Efflux values above 0 mgCO2/(m2hr) was observed during the all cold period except for only 3 weeks. Soil CO2 concentration ranged from 1600-3000 ppm in upper 10-cm layer to 10000-40000 ppm at a depth of 60 cm. The maximum concentrations of CO2 were recorded in late winter and late summer. We associate it with high biological activity (both heterotrophic and autotrophic) during the summer, and with physical gas jamming in the winter. The high value of annual CO2 production of the studied soils is caused by high organic matter content, slightly alkaline reaction, good structure and texture of urban soils. Differences in soil CO2 production by spruce and pine urban forest soils (in the pine forest 1.5-2.0 times higher) are caused by urban soil profiles construction, but not temperature regimes. Seasonal dynamics of CO2 production are the same for both soils and associated with seasonal changes in climatic parameters (temperature and moisture). CO2 efflux in the annual cycle correlates well with the soil temperature at a depth of 10 cm (r2 = 0.7). In the dry summer months, efflux largely depends on soil moisture. Soil CO2 efflux decreased by 1.5 - 2 times during the dry season.

Genotype and plant trait effects on soil CO2 efflux responses to altered precipitation in switchgrass

USDA-ARS?s Scientific Manuscript database

Background/Question/Methods Global climate change models predict increasing drought during the growing season, which will alter many ecosystem processes including soil CO2 efflux (JCO2), with potential consequences for carbon retention in soils. Soil moisture, soil temperature and plant traits such...

Effects of experimental warming on soil temperature, moisture and respiration in northern Mongolia

NASA Astrophysics Data System (ADS)

Sharkhuu, A.; Plante, A. F.; Casper, B. B.; Helliker, B. R.; Liancourt, P.; Boldgiv, B.; Petraitis, P.

2010-12-01

Mean annual air temperature in the Lake Hövsgöl region of northern Mongolia has increased by 1.8 °C over the last 40 years, greater than global average temperature increases. A decrease of soil moisture due to changes in precipitation regime is also predicted over the northern region of Mongolia. Warmer temperatures generally result in higher soil CO2 efflux, but responses of soil efflux to climate change may differ among ecosystems due to response variations in soil temperature and moisture regime. The objectives of our study were to examine the environmental responses (soil temperature and moisture) to experimental warming, and to test responses of soil CO2 efflux to experimental warming, in three different ecozones. The experimental site is located in Dalbay Valley, on the eastern shore of Lake Hövsgöl in northern Mongolia (51.0234° N 100.7600° E; 1670 m elevation). Replicate plots with ITEX-style open-top passive warming chambers (OTC) and non-warmed control areas were installed in three ecosystems: (1) semi-arid grassland on the south-facing slope not underlain by permafrost, (2) riparian zone, and (3) larch forest on the north-facing slope underlain by permafrost. Aboveground air temperature and belowground soil temperature and moisture (10 and 20 cm) were monitored using sensors and dataloggers. Soil CO2 efflux was measured periodically using a portable infra-red gas analyzer with an attached soil respiration chamber. The warming chambers were installed and data collected during the 2009 and 2010 growing seasons. Passive warming chambers increased nighttime air temperatures; more so in grassland compared to the forest. Increases in daytime air temperatures were observed in the grassland, but were not significant in the riparian and forest areas. Soil temperatures in warmed plots were consistently higher in all three ecozones at 10 cm depth but not at 20 cm depth. Warming chambers had a slight drying effect in the grassland, but no consistent effect in forest and riparian areas. Measured soil CO2 efflux rates were highest in riparian area, and lowest in the grassland. Initial results of soil efflux measurements suggest that the effect of warming treatment significantly depends on the ecosystem type: soil efflux rates differed between warming treatments in forest plots, but not in riparian and grassland plots.

Experimental warming in a dryland community reduced plant photosynthesis and soil CO2 efflux although the relationship between the fluxes remained unchanged

USGS Publications Warehouse

Wertin, Timothy M.; Belnap, Jayne; Reed, Sasha C.

2016-01-01

1. Drylands represent our planet's largest terrestrial biome and, due to their extensive area, maintain large stocks of carbon (C). Accordingly, understanding how dryland C cycling will respond to climate change is imperative for accurately forecasting global C cycling and future climate. However, it remains difficult to predict how increased temperature will affect dryland C cycling, as substantial uncertainties surround the potential responses of the two main C fluxes: plant photosynthesis and soil CO2 efflux. In addition to a need for an improved understanding of climate effects on individual dryland C fluxes, there is also notable uncertainty regarding how climate change may influence the relationship between these fluxes.2. To address this important knowledge gap, we measured a growing season's in situphotosynthesis, plant biomass accumulation, and soil CO2 efflux of mature Achnatherum hymenoides (a common and ecologically important C3 bunchgrass growing throughout western North America) exposed to ambient or elevated temperature (+2°C above ambient, warmed via infrared lamps) for three years.3. The 2°C increase in temperature caused a significant reduction in photosynthesis, plant growth, and soil CO2 efflux. Of important note, photosynthesis and soil respiration appeared tightly coupled and the relationship between these fluxes was not altered by the elevated temperature treatment, suggesting C fixation's strong control of both above-ground and below-ground dryland C cycling. Leaf water use efficiency was substantially increased in the elevated temperature treatment compared to the control treatment.4. Taken together, our results suggest notable declines in photosynthesis with relatively subtle warming, reveal strong coupling between above- and below-ground C fluxes in this dryland, and highlight temperature's strong effect on fundamental components of dryland C and water cycles.

The Effect of CO 2 on the Measurement of 220Rn and 222Rn with Instruments Utilising Electrostatic Precipitation

DOE PAGES

Lane-Smith, Derek; Sims, Kenneth

2013-06-09

In some volcanic systems, thoron and radon activity and CO 2 flux, in soil and fumaroles, show a relationship between ( 220Rn/ 222Rn) and CO 2 efflux. It is theorized that deep, magmatic sources of gas are characterized by high 222Rn activity and high CO 2 efflux, whereas shallow sources are indicated by high 220Rn activity and relatively low CO 2 efflux. In this paper we evaluate whether the observed inverse relationship is a true geochemical signal, or potentially an analytical artifact of high CO 2 concentrations. We report results from a laboratory experiment using the RAD7 radon detector, knownmore » 222Rn (radon) and 220Rn (thorn), and a controllable percentage of CO 2 in the carrier gas. Our results show that for every percentage of CO 2, the 220Rn reading should be multiplied by 1.019, the 222Rn radon should be multiplied by 1.003 and the 220Rn/ 222Rn ratio should be multiplied by 1.016 to correct for the presence of the CO 2.« less

The Effect of CO 2 on the Measurement of 220Rn and 222Rn with Instruments Utilising Electrostatic Precipitation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lane-Smith, Derek; Sims, Kenneth

In some volcanic systems, thoron and radon activity and CO 2 flux, in soil and fumaroles, show a relationship between ( 220Rn/ 222Rn) and CO 2 efflux. It is theorized that deep, magmatic sources of gas are characterized by high 222Rn activity and high CO 2 efflux, whereas shallow sources are indicated by high 220Rn activity and relatively low CO 2 efflux. In this paper we evaluate whether the observed inverse relationship is a true geochemical signal, or potentially an analytical artifact of high CO 2 concentrations. We report results from a laboratory experiment using the RAD7 radon detector, knownmore » 222Rn (radon) and 220Rn (thorn), and a controllable percentage of CO 2 in the carrier gas. Our results show that for every percentage of CO 2, the 220Rn reading should be multiplied by 1.019, the 222Rn radon should be multiplied by 1.003 and the 220Rn/ 222Rn ratio should be multiplied by 1.016 to correct for the presence of the CO 2.« less

Rate of Belowground Carbon Allocation Differs with Successional Habit of Two Afromontane Trees

PubMed Central

Shibistova, Olga; Yohannes, Yonas; Boy, Jens; Richter, Andreas; Wild, Birgit; Watzka, Margarethe; Guggenberger, Georg

2012-01-01

Background Anthropogenic disturbance of old-growth tropical forests increases the abundance of early successional tree species at the cost of late successional ones. Quantifying differences in terms of carbon allocation and the proportion of recently fixed carbon in soil CO2 efflux is crucial for addressing the carbon footprint of creeping degradation. Methodology We compared the carbon allocation pattern of the late successional gymnosperm Podocarpus falcatus (Thunb.) Mirb. and the early successional (gap filling) angiosperm Croton macrostachyus Hochst. es Del. in an Ethiopian Afromontane forest by whole tree 13CO2 pulse labeling. Over a one-year period we monitored the temporal resolution of the label in the foliage, the phloem sap, the arbuscular mycorrhiza, and in soil-derived CO2. Further, we quantified the overall losses of assimilated 13C with soil CO2 efflux. Principal Findings 13C in leaves of C. macrostachyus declined more rapidly with a larger size of a fast pool (64% vs. 50% of the assimilated carbon), having a shorter mean residence time (14 h vs. 55 h) as in leaves of P. falcatus. Phloem sap velocity was about 4 times higher for C. macrostachyus. Likewise, the label appeared earlier in the arbuscular mycorrhiza of C. macrostachyus and in the soil CO2 efflux as in case of P. falcatus (24 h vs. 72 h). Within one year soil CO2 efflux amounted to a loss of 32% of assimilated carbon for the gap filling tree and to 15% for the late successional one. Conclusions Our results showed clear differences in carbon allocation patterns between tree species, although we caution that this experiment was unreplicated. A shift in tree species composition of tropical montane forests (e.g., by degradation) accelerates carbon allocation belowground and increases respiratory carbon losses by the autotrophic community. If ongoing disturbance keeps early successional species in dominance, the larger allocation to fast cycling compartments may deplete soil organic carbon in the long run. PMID:23049813

Rate of belowground carbon allocation differs with successional habit of two afromontane trees.

PubMed

Shibistova, Olga; Yohannes, Yonas; Boy, Jens; Richter, Andreas; Wild, Birgit; Watzka, Margarethe; Guggenberger, Georg

2012-01-01

Anthropogenic disturbance of old-growth tropical forests increases the abundance of early successional tree species at the cost of late successional ones. Quantifying differences in terms of carbon allocation and the proportion of recently fixed carbon in soil CO(2) efflux is crucial for addressing the carbon footprint of creeping degradation. We compared the carbon allocation pattern of the late successional gymnosperm Podocarpus falcatus (Thunb.) Mirb. and the early successional (gap filling) angiosperm Croton macrostachyus Hochst. es Del. in an Ethiopian Afromontane forest by whole tree (13)CO(2) pulse labeling. Over a one-year period we monitored the temporal resolution of the label in the foliage, the phloem sap, the arbuscular mycorrhiza, and in soil-derived CO(2). Further, we quantified the overall losses of assimilated (13)C with soil CO(2) efflux. (13)C in leaves of C. macrostachyus declined more rapidly with a larger size of a fast pool (64% vs. 50% of the assimilated carbon), having a shorter mean residence time (14 h vs. 55 h) as in leaves of P. falcatus. Phloem sap velocity was about 4 times higher for C. macrostachyus. Likewise, the label appeared earlier in the arbuscular mycorrhiza of C. macrostachyus and in the soil CO(2) efflux as in case of P. falcatus (24 h vs. 72 h). Within one year soil CO(2) efflux amounted to a loss of 32% of assimilated carbon for the gap filling tree and to 15% for the late successional one. Our results showed clear differences in carbon allocation patterns between tree species, although we caution that this experiment was unreplicated. A shift in tree species composition of tropical montane forests (e.g., by degradation) accelerates carbon allocation belowground and increases respiratory carbon losses by the autotrophic community. If ongoing disturbance keeps early successional species in dominance, the larger allocation to fast cycling compartments may deplete soil organic carbon in the long run.

Diurnal hysteresis between soil CO2 and soil temperature is controlled by soil water content

Treesearch

Diego A. Riveros-Iregui; Ryan E. Emanuel; Daniel J. Muth; L. McGlynn Brian; Howard E. Epstein; Daniel L. Welsch; Vincent J. Pacific; Jon M. Wraith

2007-01-01

Recent years have seen a growing interest in measuring and modeling soil CO2 efflux, as this flux represents a large component of ecosystem respiration and is a key determinant of ecosystem carbon balance. Process-based models of soil CO2 production and efflux, commonly based on soil temperature, are limited by nonlinearities such as the observed diurnal hysteresis...

Unraveling carbohydrate transport mechanisms in young beech trees (Fagus sylvatica f. purpurea) by 13CO2 efflux measurements from stem and soil

NASA Astrophysics Data System (ADS)

Thoms, Ronny; Muhr, Jan; Keitel, Claudia; Kayler, Zachary; Gavrichkova, Olga; Köhler, Michael; Gessler, Arthur; Gleixner, Gerd

2016-04-01

Transport mechanisms of soluble carbohydrates and diurnal CO2 efflux from tree stems and surrounding soil are well studied. However, the effect of transport carbohydrates on respiration and their interaction with storage processes is largely unknown. Therefore, we performed a set of 13CO2 pulse labeling experiments on young trees of European beech (Fagus sylvatica f. purpurea). We labeled the whole tree crowns in a closed transparent plastic chamber with 99% 13CO2 for 30 min. In one experiment, only a single branch was labeled and removed 36 hours after labeling. In all experiments, we continuously measured the 13CO2 efflux from stem, branch and soil and sampled leaf and stem material every 3 h for 2 days, followed by a daily sampling of leaves in the successive 5 days. The compound specific δ 13C value of extracted soluble carbohydrates from leaf and stem material was measured by high-performance liquid chromatography linked with an isotope ratio mass spectrometer (HPLC-IRMS). The 13CO2 signal from soil respiration occurred only few hours after labeling indicating a very high transport rate of carbohydrates from leaf to roots and to the rhizosphere. The label was continuously depleted within the next 5 days. In contrast, we observed a remarkable oscillating pattern of 13CO2 efflux from the stem with maximum 13CO2 enrichment at noon and minima at night time. This oscillation suggests that enriched carbohydrates are respired during the day, whereas in the night the enriched sugars are not respired. The observed oscillation in stem 13CO2 enrichment remained unchanged even when only single branches were labelled and cut right afterwards. Thus, storage and conversion of carbohydrates only occurred within the stem. The δ13C patterns of extracted soluble carbohydrates showed, that a transformation of transitory starch to carbohydrates and vice versa was no driver of the oscillating 13CO2 efflux from the stem. Carbohydrates might have been transported in the phloem to the location of biosynthesis further to a storage pool from which they are respired during the day. Keywords: 13CO2 efflux, oscillating pattern, carbohydrates, transitory starch

The magnitude and variability of soil-surface CO2 efflux increase with temperature in Hawaiian tropical montane wet forests

Treesearch

Creighton M. Litton; Christian P. Giardina; Jeremy K. Albano; Michael S. Long; Gregory P. Asner

2011-01-01

Soil-surface CO2 efflux (FS; ‘soil respiration’) accounts for 50% of the CO2 released annually by the terrestrial biosphere to the atmosphere, and the magnitude and variability of this flux are likely to be sensitive to climate change. We measured FS in nine permanent plots along a 5.2C mean annual...

Transient changes in transpiration, and stem and soil CO2 efflux in longleaf pine (Pinus palustris Mill.) following fire-induced leaf area reduction

Treesearch

Barton Clinton; Chris Maier; Chelcy Ford; Robert Mitchell

2011-01-01

In 20-year-old longleaf pine, we examined short-term effects of reduced live leaf area (A L) via canopy scorching on sap flow (Q; kg H2O h−1), transpiration per unit leaf area (E L; mm day−1), stem CO2 efflux (R stem; μmol m−2 s−1) and soil CO2 efflux (R soil; μmol m−2 s−1) over a 2-week period during early summer. R stem and Q were measured at two positions (1.3-m or...

Integrated In Situ Sensing and Modeling to Assess Carbon Dioxide Emissions from Tropical Wet Forest Soils: The Role of Leaf Cutter Ant Atta Cepholotes

NASA Astrophysics Data System (ADS)

Harmon, T. C.; Fernandez Bou, A. S.; Dierick, D.; Oberbauer, S. F.; Schwendenmann, L.; Swanson, A. C.; Zelikova, T. J.

2016-12-01

This project focuses on the role of leaf cutter ants (LCA) Atta cepholotes in carbon cycling in neotropical wet forests. LCA are abundant in these forests and workers cut and carry vegetation fragments to their nests, where symbiotic fungi break down the plant material and produce the fungal hyphae on which the ants feed. LCA are the dominant herbivores in tropical forest ecosystems, removing 10-50% of vegetation annually. Their nests can achieve large sizes, extending several meters belowground and covering 50 square meters or more of the forest floor. We monitored soil moisture, temperature, and soil CO2 concentrations continuously in nest and control sites at La Selva Biological Station, Costa Rica. Intermittently, we also assessed soil respiration and LCA nest vent fluxes. Observed soil CO2 concentrations varied markedly with soil moisture conditions, ranging from a few thousand to over 60,000 ppm(v). Accordingly, soil CO2 surface efflux varied temporally by an order of magnitude or more (typical range 0.5 to 5 mmol CO2 m-2 s-1) for the same location as a consequence of soil moisture fluctuations. LCA nest vents equivalent CO2 efflux rates (accounting for vent diameter) can be substantially greater than soil surface values, with observed values ranging from about 1 to 50 mmol m-2 s-1 (it is worth noting that correcting for vent diameters yields equivalent CO2 efflux rates greater than 1000 mmol m-2 s-1). Similar to the soil surface efflux, vent efflux varied temporally by factors of 3 or more, suggesting a potential link between the vent productivity and nest activity, moisture content of surrounding soil, and atmospheric conditions (e.g., air temperature, wind). Using a soil model (Hydrus-1D) to account for unsaturated flow, heat transfer, CO2 production and diffusive transport, we captured moisture and temperature dynamics and the order of magnitude of observed CO2 concentration. Modelled surface fluxes also agreed well with observed soil surface CO2 efflux. These results contribute to our understanding of CO2 production and transport in tropical soils, and the role played by the LCA in the soil carbon cycle.

Xylem transport of root-derived CO2: An alternative flux pathway of substantial importance for understanding the components of ecosystem respiration

NASA Astrophysics Data System (ADS)

Aubrey, D. P.; Teskey, R. O.

2011-12-01

Forest ecosystem respiration releases one of the largest annual CO2 fluxes of the global carbon cycle and is dominated by belowground autotrophic and heterotrophic contributions. A mechanistic understanding of forest respiratory flux pathways is imperative to understanding carbon cycling in forests. We recently demonstrated that, on a daily basis, the amount of CO2 that fluxes upward from tree root systems into stems via the xylem stream rivals the amount of CO2 diffusing from the soil surface. However, our original observations were limited to only four individual eastern cottonwood (Populus deltoides L.) trees over a single week where environmental conditions remained similar. Here, we expand our investigation to an entire growing season using nine trees. We calculated the internal transport of root-derived CO2 as the product of sap flow and dissolved CO2 concentration ([CO2]) in the xylem at the base of the stem and measured soil CO2 efflux using the [CO2] gradient approach. We then compared the magnitude of these two flux pathways throughout the growing season. The internal transport of root-derived CO2 was equivalent to one-third of the total belowground respiration throughout the growing season. This indicates that autotrophic respiration was substantially higher than previously estimated, and also higher than heterotrophic soil respiration. The quantity of internally transported CO2 was influenced by both seasonal and daily environmental factors that influenced sap flow rates. We observed high concentrations of CO2 in xylem sap which ranged from 1% to 20% [CO2] among and within individual trees through time. Our results provide evidence that belowground autotrophic respiration consumes a larger amount-and stem respiration consumes a smaller amount-of carbohydrates than previously realized. The magnitude of the internal pathway for root-derived CO2 flux highlights the inadequacy of using the CO2 efflux from the soil surface to the atmosphere alone to measure root respiration. We suggest the internal transport of root-derived CO2 should be measured concurrently with CO2 efflux to the atmosphere to more fully understand the components of ecosystem respiration.

Nitrate and Ammonium Induced Photosynthetic Suppression in N-Limited Selenastrum minutum: II. Effects of NO(3) and NH(4) Addition to CO(2) Efflux in the Light.

PubMed

Birch, D G; Elrifi, I R; Turpin, D H

1986-11-01

The effects of nitrate and ammonium addition on net and gross photosynthesis, CO(2) efflux and the dissolved inorganic carbon compensation point of nitrogen-limited Selenastrum minutum Naeg. Collins (Chlorophyta) were studied. Cultures pulsed with nitrate or ammonium exhibited a marked decrease in both net and gross photosynthetic carbon fixation. During this period of suppression the specific activity of exogenous dissolved inorganic carbon decreased rapidly in comparison to control cells indicating an increase in the rate of CO(2) efflux in the light. The nitrate and ammmonium induced rates of CO(2) efflux were 31.0 and 33.8 micromoles CO(2) per milligram chlorophyll per hour, respectively, and represented 49 and 48% of the rate of gross photosynthesis. Nitrate addition to cells at dissolved inorganic carbon compensation point caused an increase in compensation point while ammonium had no effect. In the presence of the tricarboxylic acid cycle inhibitor fluoroacetate, the nitrate-induced change in compensation point was greatly reduced suggesting the source of this CO(2) was the tricarboxylic acid cycle. These results are consistent with the mechanism of N-induced photosynthetic suppression outlined by Elrifi and Turpin (1986 Plant Physiol 81: 273-279).

Environmental forcing does not induce diel or synoptic variation in the carbon isotope content of forest soil respiration

DOE PAGES

Bowling, D. R.; Egan, J. E.; Hall, S. J.; ...

2015-08-31

Recent studies have examined temporal fluctuations in the amount and carbon isotope content (δ 13C) of CO 2 produced by the respiration of roots and soil organisms. These changes have been correlated with diel cycles of environmental forcing (e.g., sunlight and soil temperature) and with synoptic-scale atmospheric motion (e.g., rain events and pressure-induced ventilation). We used an extensive suite of measurements to examine soil respiration over 2 months in a subalpine forest in Colorado, USA (the Niwot Ridge AmeriFlux forest). Observations included automated measurements of CO 2 and δ 13C of CO 2 in the soil efflux, the soil gasmore » profile, and forest air. There was strong diel variability in soil efflux but no diel change in the δ 13C of the soil efflux (δ R) or the CO 2 produced by biological activity in the soil (δ J). Following rain, soil efflux increased significantly, but δ R and δ J did not change. Temporal variation in the δ 13C of the soil efflux was unrelated to measured environmental variables, and we failed to find an explanation for this unexpected result. Measurements of the δ 13C of the soil efflux with chambers agreed closely with independent observations of the isotopic composition of soil CO 2 production derived from soil gas well measurements. Deeper in the soil profile and at the soil surface, results confirmed established theory regarding diffusive soil gas transport and isotopic fractionation. Deviation from best-fit diffusion model results at the shallower depths illuminated a pump-induced ventilation artifact that should be anticipated and avoided in future studies. There was no evidence of natural pressure-induced ventilation of the deep soil. However, higher variability in δ 13C of the soil efflux relative to δ 13C of production derived from soil profile measurements was likely caused by transient pressure-induced transport with small horizontal length scales.« less

Impacts of fire on sources of soil CO2 efflux in a dry Amazon rain forest.

PubMed

Metcalfe, Daniel B; Rocha, Wanderley; Balch, Jennifer K; Brando, Paulo M; Doughty, Christopher E; Malhi, Yadvinder

2018-05-10

Fire at the dry southern margin of the Amazon rainforest could have major consequences for regional soil carbon (C) storage and ecosystem carbon dioxide (CO 2 ) emissions, but relatively little information exists about impacts of fire on soil C cycling within this sensitive ecotone. We measured CO 2 effluxes from different soil components (ground surface litter, roots, mycorrhizae, soil organic matter) at a large-scale burn experiment designed to simulate a severe but realistic potential future scenario for the region (Fire plot) in Mato Grosso, Brazil, over one year, and compared these measurements to replicated data from a nearby, unmodified Control plot. After four burns over five years, soil CO 2 efflux (R s ) was ~ 5.5 t C ha -1 yr -1 lower on the Fire plot compared to the Control. Most of the Fire plot R s reduction was specifically due to lower ground surface litter and root respiration. Mycorrhizal respiration on both plots was around ~ 20% of R s . Soil surface temperature appeared to be more important than moisture as a driver of seasonal patterns in R s at the site. Regular fire events decreased the seasonality of R s at the study site, due to apparent differences in environmental sensitivities among biotic and abiotic soil components. These findings may contribute towards improved predictions of the amount and temporal pattern of C emissions across the large areas of tropical forest facing increasing fire disturbances associated with climate change and human activities. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Soil CO2 concentrations and efflux dynamics of a tree island in the Pantanal wetland

NASA Astrophysics Data System (ADS)

Lathuillière, Michael J.; Pinto, Osvaldo B.; Johnson, Mark S.; Jassal, Rachhpal S.; Dalmagro, Higo J.; Leite, Nei K.; Speratti, Alicia B.; Krampe, Daniela; Couto, Eduardo G.

2017-08-01

The Pantanal is the largest tropical wetland on the planet, and yet little information is available on the biome's carbon cycle. We used an automatic station to measure soil CO2 concentrations and oxidation-reduction potential over the 2014 and 2015 flood cycles of a tree island in the Pantanal that is immune to inundation during the wetland's annual flooding. The soil CO2 concentration profile was then used to estimate soil CO2 efflux over the two periods. In 2014, subsurface soil saturation at 0.30 m depth created conditions in that layer that led to CO2 buildup close to 200,000 ppm and soil oxidation-reduction potential below -300 mV, conditions that were not repeated in 2015 due to annual variability in soil saturation at the site. Mean CO2 efflux over the 2015 flood cycle was 0.023 ± 0.103 mg CO2-C m-2 s-1 representing a total annual efflux of 593 ± 2690 mg CO2-C m-2 y-1. Unlike a nearby tree island site that experiences full inundation during the wet season, here the soil dried quickly following repeated rain events throughout the year, which led to the release of CO2 pulses from the soil. This study highlights not only the complexity and heterogeneity in the Pantanal's carbon balance based on differences in topography, flood cycles, and vegetation but also the challenges of applying the gradient method in the Pantanal due to deviations from steady state conditions.

Sediment carbon and nutrient fluxes from cleared and intact temperate mangrove ecosystems and adjacent sandflats.

PubMed

Bulmer, Richard H; Schwendenmann, Luitgard; Lohrer, Andrew M; Lundquist, Carolyn J

2017-12-01

The loss of mangrove ecosystems is associated with numerous impacts on coastal and estuarine function, including sediment carbon and nutrient cycling. In this study we compared in situ fluxes of carbon dioxide (CO 2 ) from the sediment to the atmosphere, and fluxes of dissolved inorganic nutrients and oxygen across the sediment-water interface, in intact and cleared mangrove and sandflat ecosystems in a temperate estuary. Measurements were made 20 and 25months after mangrove clearance, in summer and winter, respectively. Sediment CO 2 efflux was over two-fold higher from cleared than intact mangrove ecosystems at 20 and 25months after mangrove clearance. The higher CO 2 efflux from the cleared site was explained by an increase in respiration of dead root material along with sediment disturbance following mangrove clearance. In contrast, sediment CO 2 efflux from the sandflat site was negligible (≤9.13±1.18mmolm -2 d -1 ), associated with lower sediment organic matter content. The fluxes of inorganic nutrients (NH 4 + , NO x and PO 4 3- ) from intact and cleared mangrove sediments were low (≤20.37±18.66μmolm -2 h - 1 ). The highest NH 4 + fluxes were measured at the sandflat site (69.21±13.49μmolm -2 h - 1 ). Lower inorganic nutrient fluxes within the cleared and intact mangrove sites compared to the sandflat site were associated with lower abundance of larger burrowing macrofauna. Further, a higher fraction of organic matter, silt and clay content in mangrove sediments may have limited nutrient exchange. Copyright © 2017 Elsevier B.V. All rights reserved.

Soil respiration contributes substantially to urban carbon fluxes in the greater Boston area.

PubMed

Decina, Stephen M; Hutyra, Lucy R; Gately, Conor K; Getson, Jackie M; Reinmann, Andrew B; Short Gianotti, Anne G; Templer, Pamela H

2016-05-01

Urban areas are the dominant source of U.S. fossil fuel carbon dioxide (FFCO2) emissions. In the absence of binding international treaties or decisive U.S. federal policy for greenhouse gas regulation, cities have also become leaders in greenhouse gas reduction efforts through climate action plans. These plans focus on anthropogenic carbon flows only, however, ignoring a potentially substantial contribution to atmospheric carbon dioxide (CO2) concentrations from biological respiration. Our aim was to measure the contribution of CO2 efflux from soil respiration to atmospheric CO2 fluxes using an automated CO2 efflux system and to use these measurements to model urban soil CO2 efflux across an urban area. We find that growing season soil respiration is dramatically enhanced in urban areas and represents levels of CO2 efflux of up to 72% of FFCO2 within greater Boston's residential areas, and that soils in urban forests, lawns, and landscaped cover types emit 2.62 ± 0.15, 4.49 ± 0.14, and 6.73 ± 0.26 μmolCO2 m(-2) s(-1), respectively, during the growing season. These rates represent up to 2.2 times greater soil respiration than rates found in nearby rural ecosystems in central Massachusetts (MA), a potential consequence of imported carbon amendments, such as mulch, within a general regime of landowner management. As the scientific community moves rapidly towards monitoring, reporting, and verification of CO2 emissions using ground based approaches and remotely-sensed observations to measure CO2 concentrations, our results show that measurement and modeling of biogenic urban CO2 fluxes will be a critical component for verification of urban climate action plans. Copyright © 2016 Elsevier Ltd. All rights reserved.

Peatland simulator connecting drainage, nutrient cycling, forest growth, economy and GHG efflux in boreal and tropical peatlands

NASA Astrophysics Data System (ADS)

Lauren, Ari; Hökkä, Hannu; Launiainen, Samuli; Palviainen, Marjo; Lehtonen, Aleksi

2016-04-01

Forest growth in peatlands is nutrient limited; principal source of nutrients is the decomposition of organic matter. Excess water decreases O2 diffusion and slows down the nutrient release. Drainage increases organic matter decomposition, CO2 efflux, and nutrient supply, and enhances the growth of forest. Profitability depends on costs, gained extra yield and its allocation into timber assortments, and the rate of interest. We built peatland simulator Susi to define and parameterize these interrelations. We applied Susi-simulator to compute water and nutrient processes, forest growth, and CO2 efflux of forested drained peatland. The simulator computes daily water fluxes and storages in two dimensions for a peatland forest strip located between drainage ditches. The CO2 efflux is made proportional to peat bulk density, soil temperature and O2 availability. Nutrient (N, P, K) release depends on decomposition and peat nutrient content. Growth limiting nutrient is detected by comparing the need and supply of nutrients. Increased supply of growth limiting nutrient is used to quantify the forest growth response to improved drainage. The extra yield is allocated into pulpwood and sawlogs based on volume of growing stock. The net present values of ditch cleaning operation and the gained extra yield are computed under different rates of interest to assess the profitability of the ditch cleaning. The hydrological sub-models of Susi-simulator were first parameterized using daily water flux data from Hyytiälä SMEAR II-site, after which the predictions were tested against independent hydrologic data from two drained peatland forests in Southern Finland. After verification of the hydrologic model, the CO2 efflux, nutrient release and forest growth proportionality hypothesis was tested and model performance validated against long-term forest growth and groundwater level data from 69 forested peatland sample plots in Central Finland. The results showed a clear relation between the stand growth, nutrient availability, and CO2 efflux. Potassium was the main limiting factor for the forest growth. This indicates that management aiming at decreasing heterotrophic CO2 efflux by raising the ground water table will decrease the forest growth. From the C balance perspective the growth rate of the tree stand becomes essential. Modelling approach enables a search for an optimal management schedule for producing timber in situation when there is a price given for release of C. Ditch network maintenance by ditch cleaning becomes profitable if: i) the initial drainage is very poor, ii) the availability of the critical nutrient is sufficient, iii) during prolonged rainy conditions, and iv) the tree stand is Scots pine (Pinus sylvestris) dominated and v) in a phase where most of the extra yield is allocated into sawlogs. The simulator and its holistic approach has been successfully implemented in both tropical pulpwood plantations in Sumatra, Indonesia and in Finnish boreal forests.

CO2-efflux measurements for evaluating source zone natural attenuation rates in a petroleum hydrocarbon contaminated aquifer.

PubMed

Sihota, Natasha J; Singurindy, Olga; Mayer, K Ulrich

2011-01-15

In order to gain regulatory approval for source zone natural attenuation (SZNA) at hydrocarbon-contaminated sites, knowledge regarding the extent of the contamination, its tendency to spread, and its longevity is required. However, reliable quantification of biodegradation rates, an important component of SZNA, remains a challenge. If the rate of CO(2) gas generation associated with contaminant degradation can be determined, it may be used as a proxy for the overall rate of subsurface biodegradation. Here, the CO(2)-efflux at the ground surface is measured using a dynamic closed chamber (DCC) method to evaluate whether this technique can be used to assess the areal extent of the contaminant source zone and the depth-integrated rate of contaminant mineralization. To this end, a field test was conducted at the Bemidji, MN, crude oil spill site. Results indicate that at the Bemidji site the CO(2)-efflux method is able to both delineate the source zone and distinguish between the rates of natural soil respiration and contaminant mineralization. The average CO(2)-efflux associated with contaminant degradation in the source zone is estimated at 2.6 μmol m(-2) s(-1), corresponding to a total petroleum hydrocarbon mineralization rate (expressed as C(10)H(22)) of 3.3 g m(-2) day(-1).

Biochar from sugarcane filtercake reduces soil CO2 emissions relative to raw residue and improves water retention and nutrient availability in a highly-weathered tropical soil.

PubMed

Eykelbosh, Angela Joy; Johnson, Mark S; Santos de Queiroz, Edmar; Dalmagro, Higo José; Guimarães Couto, Eduardo

2014-01-01

In Brazil, the degradation of nutrient-poor Ferralsols limits productivity and drives agricultural expansion into pristine areas. However, returning agricultural residues to the soil in a stabilized form may offer opportunities for maintaining or improving soil quality, even under conditions that typically promote carbon loss. We examined the use of biochar made from filtercake (a byproduct of sugarcane processing) on the physicochemical properties of a cultivated tropical soil. Filtercake was pyrolyzed at 575°C for 3 h yielding a biochar with increased surface area and porosity compared to the raw filtercake. Filtercake biochar was primarily composed of aromatic carbon, with some residual cellulose and hemicellulose. In a three-week laboratory incubation, CO2 effluxes from a highly weathered Ferralsol soil amended with 5% biochar (dry weight, d.w.) were roughly four-fold higher than the soil-only control, but 23-fold lower than CO2 effluxes from soil amended with 5% (d.w.) raw filtercake. We also applied vinasse, a carbon-rich liquid waste from bioethanol production typically utilized as a fertilizer on sugarcane soils, to filtercake- and biochar-amended soils. Total CO2 efflux from the biochar-amended soil in response to vinasse application was only 5% of the efflux when vinasse was applied to soil amended with raw filtercake. Furthermore, mixtures of 5 or 10% biochar (d.w.) in this highly weathered tropical soil significantly increased water retention within the plant-available range and also improved nutrient availability. Accordingly, application of sugarcane filtercake as biochar, with or without vinasse application, may better satisfy soil management objectives than filtercake applied to soils in its raw form, and may help to build soil carbon stocks in sugarcane-cultivating regions.

Biochar from Sugarcane Filtercake Reduces Soil CO2 Emissions Relative to Raw Residue and Improves Water Retention and Nutrient Availability in a Highly-Weathered Tropical Soil

PubMed Central

Eykelbosh, Angela Joy; Johnson, Mark S.; Santos de Queiroz, Edmar; Dalmagro, Higo José; Guimarães Couto, Eduardo

2014-01-01

In Brazil, the degradation of nutrient-poor Ferralsols limits productivity and drives agricultural expansion into pristine areas. However, returning agricultural residues to the soil in a stabilized form may offer opportunities for maintaining or improving soil quality, even under conditions that typically promote carbon loss. We examined the use of biochar made from filtercake (a byproduct of sugarcane processing) on the physicochemical properties of a cultivated tropical soil. Filtercake was pyrolyzed at 575°C for 3 h yielding a biochar with increased surface area and porosity compared to the raw filtercake. Filtercake biochar was primarily composed of aromatic carbon, with some residual cellulose and hemicellulose. In a three-week laboratory incubation, CO2 effluxes from a highly weathered Ferralsol soil amended with 5% biochar (dry weight, d.w.) were roughly four-fold higher than the soil-only control, but 23-fold lower than CO2 effluxes from soil amended with 5% (d.w.) raw filtercake. We also applied vinasse, a carbon-rich liquid waste from bioethanol production typically utilized as a fertilizer on sugarcane soils, to filtercake- and biochar-amended soils. Total CO2 efflux from the biochar-amended soil in response to vinasse application was only 5% of the efflux when vinasse was applied to soil amended with raw filtercake. Furthermore, mixtures of 5 or 10% biochar (d.w.) in this highly weathered tropical soil significantly increased water retention within the plant-available range and also improved nutrient availability. Accordingly, application of sugarcane filtercake as biochar, with or without vinasse application, may better satisfy soil management objectives than filtercake applied to soils in its raw form, and may help to build soil carbon stocks in sugarcane-cultivating regions. PMID:24897522

Predicting Soil CO2 Efflux Rates in the Loblolly Pine Ecosystem Across the Region

Treesearch

Christopher Gough; John Seiler; Eric Wiseman

2004-01-01

Patterns in soil CO2 efflux (Ec) over a short rotation were examined using a chronosequence approach on South Carolina Coastal Plain and Virginia Piedmont loblolly pine (Pinus taeda L.) stands. Ec was measured over an entire year in four separate age classes at both measurement...

DECLINE IN SOIL CO2 EFFLUX FOLLOWING TREE GIRTLING IN MATURE BEECH AND SPRUCE STANDS IN GERMANY

EPA Science Inventory

Studies were undertaken to estimate the contribution of autotrophic respiration to total soil CO2 efflux in stands of mature European beech (Fagus sylvatica) and Norway spruce (Picea abies) near Freising, Germany. Five mature trees of each species were girdled to eliminate carbo...

Influence of repeated canopy scorching on soil CO2 efflux

Treesearch

DP Aubrey; B Martazavi; Joseph O' Brien; JD McGee; JJ Hendricks; KA Kuehn; RJ Mitchell

2012-01-01

Forest ecosystems experience various disturbances that can affect belowground carbon cycling to different degrees. Here, we investigate if successive annual foliar scorching events will result in a large and rapid decline in soil CO2 efflux, similar to that observed in girdling studies. Using the fire-adapted longleaf pine (Pinus...

Carbon dioxide effluxes and their environmental controls in sagebrush steppe ecosystems along an elevation gradient in the Reynolds Creek Critical Zone Observatory

NASA Astrophysics Data System (ADS)

Lohse, K. A.; Fellows, A.; Flerchinger, G. N.; Seyfried, M. S.

2017-12-01

The spatial and temporal variation of carbon dioxide effluxes and their environmental controls are poorly constrained in cold shrub steppe ecosystems. The objectives of this study were to 1) analyze environmental parameters in determining soil CO2 efflux, 2) assess the level of agreement between manual chambers and force diffusion (FD) soil CO2 efflux chambers, when both measurements are extrapolated across the growing season, and lastly to compare respiration fluxes to modeled ecosystem respiration fluxes. We installed FD chambers at four sites co-located with eddy covariance (EC) towers and soil moisture and temperature sensors along an elevation gradient in the Reynolds Creek Critical Zone Observatory in SW Idaho. FD chamber fluxes were collected continuously at 15-minute intervals. We sampled soil CO2 efflux with manual chambers at plant and interplant spaces in five plots at each site biweekly to monthly during the growing season. The sites included a Wyoming big sagebrush site, a low sagebrush site, a post-fire mountain big sagebrush site, and a mountain big sagebrush site located at elevations of 1425, 1680, 1808 and 2111 m. Climate variation followed the montane elevation gradient; mean annual precipitation (MAP) at the sites is 290, 337, 425, and 795 mm, respectively, and mean annual temperature is 8.9, 8.4, 6.1, 5.4°C. Automated force diffusion chambers detected large differences in carbon dioxide pulse dynamics along the elevation gradient. Growing season carbon dioxide fluxes were 3 times higher at the 425 mm MAP site compared than the lowest elevation sites at 290 and 337 MAP sites and >1.5 higher than the 795 mm MAP site over the same period. Manual fluxes showed similar seasonal patterns as FD chamber fluxes but often higher and greater spatial variability in fluxes than FD chamber fluxes. Plant and interplant flux differences were surprisingly similar, especially at higher elevations. Soil respiration ranged from 0.2-0.48 of ecosystem respiration suggesting that aboveground maintenance costs were relatively high at all of these sites. We conclude that coupled FD chamber, EC tower, and manual estimates hold promise in helping to partition and scale carbon fluxes from the plot to landscape scale.

Soil CO2, CH4 and N2O effluxes and concentrations in soil profiles down to 15.5m depth in eucalypt plantations under contrasted rainfall regimes

NASA Astrophysics Data System (ADS)

Germon, A.; Nouvellon, Y.; Christophe, J.; Chapuis-Lardy, L.; Robin, A.; Rosolem, C. A.; Gonçalves, J. L. D. M.; Guerrini, I. A.; Laclau, J. P.

2017-12-01

Silvicultural practices in planted forests affect the fluxes of greenhouse gases at the soil surface and the major factors driving greenhouse gas production in forest soils (substrate supply, temperature, water content,…) vary with soil depth. Our study aimed to assess the consequences of drought on the temporal variability of CO2, CH4 and N2O fluxes throughout very deep soil profiles in Eucalyptus grandis plantations 3 months before the harvest then in coppice, the first 18 months after clear-cutting. Two treatments were compared: one with 37% of throughfall excluded by plastic sheets (TE), and one without rainfall exclusion (WE). Measurements of soil CO2 efflux were made every two weeks for 30 months using a closed-path Li8100 system in both treatment. Every two weeks for 21 months, CO2, CH4 and N2O surface effluxes were measured using the closed-chamber method and concentrations in the soil were measured at 7 depths down to 15.5 m in both TE and WE. At most measurement dates, soil CO2 efflux were significantly higher in TE than in WE. Across the two treatments and the measurement dates, CO2 concentrations increased from 4446 ± 2188 ppm at 10 cm deep to 15622 ± 3523 ppm at 15.5 m, CH4 concentrations increased from 0.41 ± 0.17 ppm at 10 cm deep to 0.77 ± 0.24 ppm at 15.5 m and N2O concentrations remained roughly constant and were on average 478 ± 55 ppb between soil surface and 15.5 m deep. CO2 and N2O concentrations were on average 20.7 and 7.6% lower in TE than in WE, respectively, across the sampling depths. However, CH4 concentrations in TE were on average 44.4% higher than in WE, throughout the soil profile. Those results suggest that extended drought periods might reduce the production of CO2 and N2O but increase the accumulation of CH4 in eucalypt plantations established in deep tropical soils. Very deep tropical soils cover huge areas worldwide and improving our understanding of the spatiotemporal dynamics of gas concentrations in deep soil layers is essential to: i) quantify more accurately C source/sink fluxes as part of the global carbon budget, ii) improve the current biogeochemical models predicting the effect of drought periods on greenhouse gas effluxes, and iii) identify more sustainable silvicultural practices for tropical planted forests in a context of climate change.

Quantifying the magnitude and spatiotemporal variation of aquatic CO2 fluxes in a sub-tropical karst catchment, Southwest China

NASA Astrophysics Data System (ADS)

Ding, Hu; Waldron, Susan; Newton, Jason; Garnett, Mark H.

2017-04-01

The role played by rivers in regional and global C budgets is receiving increasing attention. A large portion of the carbon transported via inland waters is returned to the atmosphere by carbon dioxide evasion from rivers and lakes. Karst landscapes represent an important C store on land, and are also considered to play an important role in climate regulation by consuming atmospheric CO2 during chemical weathering. However, we cannot be certain how effective this sink is if we do not know how efficiently the rivers draining karst landscapes remobilise weathered C to the atmosphere as CO2. pCO2 in karst waters is generally greater than atmospheric equilibrium, indicating that there can be a net CO2 efflux to the atmosphere. However, measurement confirming this and quantifying flux rates has been rarely conducted. Using a floating chamber method, in 2016 we directly measured CO2 fluxes from spatially distributed freshwaters (springs, sinkholes, streams and reservoirs/ponds) in the Houzhai Catchment, a karst region in SW China. Fluxes ranged from -0.5 to +267.4 μmol CO2 m-2s-1, and most sites showed seasonal variations with higher CO2 efflux rates in the wet (April - September) than dry season (October - March). There was a significant positive relationship between CO2 efflux and flow velocity, indicating that hydraulic controls on CO2 efflux from flowing water are important, while for water with little movement (sinkholes and reservoirs/ponds), pCO2 appears a more important control on efflux rates. Conditions similar to this study area may exist in many sub-tropical rivers that drain karst landscapes in South China. These waters are rich in DIC which can be an order of magnitude greater than some non-karst catchments. The large DIC pool has the potential to be a considerable source of free CO2 to the atmosphere. Considering that carbonate lithology covers a significant part of the Earth's surface, CO2 evasion in fluvial water from these regions is expected to contribute notably to the annual carbon dioxide release from global freshwater systems, thus must be better represented in global spatial analyses of CO2 evasion. This research advances this need.

Increased belowground C release during initial plant development of Populus deltoides x nigra grown under light and C reserve limited conditions

NASA Astrophysics Data System (ADS)

Studer, Mirjam S.; Siegwolf, Rolf T. W.; Schmidt, Michael W. I.; Abiven, Samuel

2014-05-01

Plants might be a key factor for the long-term stabilisation of carbon (C) in the soil, e.g. through enhanced physical protection of root-derived C against microbial decomposition in soil aggregates. On the other hand C released by the plants into the soil might promote the decomposition of native soil organic matter (SOM) through the stimulation of microbial activity. We measured the C budget of developing plant-soil systems (Populus deltoides x nigra, Cambisol soil) in the laboratory under controlled environmental conditions. In order to distinguish plant-derived from native C in the SOM and the soil CO2 efflux, we labelled the poplar shoots continuously with 13C-CO2 from first emergence of leaves (sprouting from stem cuttings). Throughout the experiment the CO2 fluxes (photosynthetic assimilation, dark respiratory loss, soil CO2 efflux) were measured frequently (every 30 min) and the 13C was traced in the soil CO2 efflux (1-2 times a week). After 10 weeks the plant-soil systems were destructively harvested and the distribution of the 13C distribution was analysed. The plants developed slowly (compared to previous experiments), most likely due to limitation in C reserves (long term cutting storage) and C supply (low light intensities). The amount of 13C recovered in the roots, microbial biomass and soil CO2 efflux was directly correlated with the leaf area of the different plant individuals. After 3-4 weeks of plant development we observed a high peak in the total soil CO2 efflux. During this time the relative belowground C release was increased massively over the basal rate of 17 % of net C assimilated, whereby the variability between the plant individuals was large. The smallest plants, i.e. the plants that were most resource limited, obtained the highest belowground C release accounting at the peak time for up to 57 % of net assimilated C. We hypothesize that the plants released specific compounds, which either directly (enzymatically) or indirectly (priming) enhanced the decomposition of native SOM as a survival mechanisms (e.g. mine for nutrients). The results of this study confirm linear correlations between aboveground plant traits (leaf area) and belowground C allocation into roots, microbial biomass and plant-derived respiration. However it also highlights that plant-soil systems are not permanently in a steady state. C allocation patterns can change massively when the plant is under stress, which affects other fluxes within the terrestrial C cycle, such as the microbial decomposition of SOM.

Annual soil CO_{2} production in Moscow Botanical Garden (Russia).

NASA Astrophysics Data System (ADS)

Udovenko, Maria; Goncharova, Olga; Matyshak, Georgy

2017-04-01

Soil respiration is an essential component of the carbon cycle, determining 25-40 % of carbon dioxide in the atmosphere. Urban soils are subject to significant anthropogenic influences. Anthropogenic impact affects both the plants and the soil microbiota. So, soil CO2 efflux and soil profile CO2 concentration probably differ in urban and natural soils. Influence of abiotic factors on soil carbon dioxide production is explored insufficiently. The research of their impact on soil carbon dioxide production is necessary to predict soil response to anthropogenic climate change. The aim of this study was estimation of annual soil CO2 production and the impact of climatic factors on it. The research took place in Moscow State University Botanical Garden Arboretum (southern taiga). Investigations were carried out at two sites: the areas planted with Picea obovata and Carpinus betulus. The study was conducted with 1-2 weeks intervals between November 2014 and December 2015. Emission measurement were carried out by closed chamber technique, profile concentration were measured by soil air sampling tubes method. Annual carbon dioxide soil surface efflux of soil planted with Picea obovata was 1370 gCO2/(m2 * year), soil planted with Carpinus betulus - 1590 gCO2/(m2 * year). Soil CO2 concentration increased with depth in average of 3300 to 12000 ppm (at 80 cm depth). Maximum concentration values are confined to the end of vegetation period (high biological activity) and to beginning of spring (spring ice cover of soil prevents CO2 emission). Soil CO2 efflux depends on soil temperature at 10 cm depth (R = 0.89; p <0.05), in a less degree it correlate with soil surface temperature and with soil temperature at 20 cm depth (r=0.88; p<0.05). Soil moisture has a little effect on CO2 efflux in the annual cycle (r=-0.16; p<0.05). However in vegetation period efflux of carbon dioxide largely depends on soil moisture, due to the fact, that soil moisture is limiting factor for soil microbiota activity and plant respiration.

Soil microbial respiration (CO2) of natural and anthropogenically-transformed ecosystems in Moscow region, Russia

NASA Astrophysics Data System (ADS)

Ivashchenko, Kristina; Ananyeva, Nadezhda; Rogovaya, Sofia; Vasenev, Viacheslav

2016-04-01

The CO2 concentration in modern atmosphere is increasing and one of the most reasons of it is land use changing. It is related not only with soil plowing, but also with growing urbanization and, thereby, forming the urban ecosystems. Such conversion of soil cover might be affected by efflux CO2 from soil into atmosphere. The soil CO2 efflux mainly supplies by soil microorganisms respiration (contribution around 70-90%) and plant roots respiration. Soil microbial respiration (MR) is determined in the field (in situ) and laboratory (in vitro) conditions. The measurement of soil MR in situ is labour-consuming, and for district, region and country areas it is difficult carried. We suggest to define the MR of the upper highest active 10 cm mineral soil layer (in vitro) followed by the accounting of area for different ecosystems in large region of Russia. Soils were sampled (autumn, 2011) in natural (forest, meadow) and anthropogenically-transformed (arable, urban) ecosystems of Sergiev-Posad, Taldom, Voskresenk, Shatura, Serpukhov and Serbryanye Prudy districts in Moscow region. In soil samples (total 156) the soil MR (24 h, 22°C, 60% WHC) were measured after preincubation procedure (7 d., 22°C, 55% WHC). The soil MR ranged from 0.13 (urban) to 5.41 μg CO2-C g-1 h-1 (meadow), the difference between these values was 42 times. Then, the soil MR values (per unit soil weight) were calculated per unit soil area (1 m2), the layer thickness of which was 0.1 m (soil volume weight was equaled 1 g cm-3). The high MR values were noted for forests soil (832-1410 g CO2-C m-2 yr-1) of studied districts, and the low MR values were for arable and urban soils (by 1.6-3.2 and 1.3-2.7 times less compared to forests, respectively). The MR rate of urban soil in Voskresenk district was comparable to that of corresponding meadows and it was even higher (in average by 2.3 times) in Serpukhov district. The soil MR rate of studied cities was higher by 20%, than in corresponding arable soils (438-517 g CO2-C m-2 yr-1). Furthermore, we took into account the area of different ecosystems, which achieves 47% for forests, 6, 30 and 5% for meadows, arable and cities, respectively, of total area in studied districts. It turns that the soil MR of forests area was highest reaching 281-1391 thousand tons CO2-C yr-1. The soil MR of meadows area was reached 15-76 thousand tons CO2-C yr-1, that was by 1.6-2.7 times lower than those in cities of the most urbanized districts (Sergiev-Posad, Voskresenk and Serpukhov). Suggested approach allows us to compare soil MR (main biogenic CO2 source) of different ecosystems' area in Moscow region. It was shown that urban soils might be significant source of CO2 in atmosphere, therefore they should be taken into account for balance calculation of carbon cycle, and especially at regional level. This approach might useful for express assessment of microbial soil CO2 efflux, soil ecological monitoring, and predictive estimation of soil CO2 efflux for a wide range of ecosystems, including human activities disturbed ones.

Soil respiration and aboveground litter dynamics of a tropical transitional forest in northwest Mato Grosso, Brazil

NASA Astrophysics Data System (ADS)

Valentini, Carla Maria Abido; Sanches, Luciana; de Paula, Sérgio Roberto; Vourlitis, George Louis; de Souza Nogueira, José; Pinto, Osvaldo Borges; de Almeida Lobo, Francisco

2008-12-01

Measurements of soil CO2 efflux, litter production, and the surface litter pool biomass were made over a 1 year period in a tropical transitional forest near Sinop, Mato Grosso, Brazil with the aim of quantifying the seasonal variation in soil respiration and litter decomposition and the annual contribution of litter decomposition to soil CO2 efflux. Average annual soil CO2 efflux (+/-95% confidence interval (CI)) was 7.91 +/- 1.16 g C m-2 d-1. Soil CO2 efflux was highest during the November-February wet season (9.15 +/- 0.90 g C m-2 d-1) and lowest during the May-September dry season (6.19 +/- 1.40 g C m-2 d-1), and over 60% of the variation in seasonal soil CO2 efflux was explained by seasonal variations in soil temperature and moisture. Mass balance estimates of mean (+/-95% CI) decomposition rates were statistically different between the wet and dry seasons (0.66 +/- 0.08 and 1.65 +/- 0.10 g C m-2 d-1, respectively), and overall, decomposition of leaf litter comprised 16% of the average annual soil respiration. Leaf litter production was higher during the dry season, and mean (+/-95% CI) leaf litter fall (5.6 +/- 1.7 Mg ha-1) comprised 73% of the total litter fall (7.8 +/- 2.3 Mg ha-1). Average (+/-95% CI) annual litter pool biomass was estimated to be 5.5 +/- 0.3 Mg ha-1, which was similar to the measured pool size (5.7 +/- 2.2 Mg ha-1). Overall, seasonal variations in environmental variables, specifically water availability (soil moisture and rainfall), had a profound influence on litter production, soil respiration, and surface litter decomposition.

Calibrating soil respiration measures with a dynamic flux apparatus using artificial soil media of varying porosity

Treesearch

John R. Butnor; Kurt H. Johnsen

2004-01-01

Measurement of soil respiration to quantify ecosystem carbon cyclingrequires absolute, not relative, estimates of soil CO2 efflux. We describe a novel, automated efflux apparatus that can be used to test the accuracy of chamber-based soil respiration measurements by generating known CO2 fluxes. Artificial soil is supported...

Non-growing season soil CO2 efflux patterns in five land-use types in northern China

USDA-ARS?s Scientific Manuscript database

Overgrazing and unsuitable farming practices have led to grassland degradation in northern China. This studhy examined soil CO2 efflux (Fc) from five land-use types during the non-growing season on the southeastern edge of the Mongolian Plateau in China. The land-use types included three native v...

Wood CO2 efflux in a primary tropical rain forest

Treesearch

Molly A. Cavaleri; Steven F. Oberbauer; Michael G. Ryan

2006-01-01

The balance between photosynthesis and plant respiration in tropical forests may substantially affect the global carbon cycle. Woody tissue CO2 efflux is a major component of total plant respiration, but estimates of ecosystem-scale rates are uncertain because of poor sampling in the upper canopy and across landscapes. To overcome these problems, we used a portable...

Critical evaluation of 13C natural abundance techniques to partition soil-surface CO2 efflux

NASA Astrophysics Data System (ADS)

Snell, H.; Midwood, A. J.; Robinson, D.

2013-12-01

Soil is the largest terrestrial store of carbon and the flux of CO2 from soils to the atmosphere is estimated at around 98 Pg (98 billion tonnes) of carbon per year. The CO2 efflux from the soil surface is derived from plant root and rhizosphere respiration (autotrophically fuelled) and microbial degradation of soil organic matter (heterotrophic respiration). Heterotrophic respiration is a key determinant of an ecosystem's long-term C balance, but one that is difficult to measure in the field. One approach involves partitioning the total soil-surface CO2 efflux between heterotrophic and autotrophic components; this can be done using differences in the natural abundance stable isotope ratios (δ13C) of autotrophic and heterotrophic CO2 as the end-members of a simple mixing model. In most natural, temperate ecosystems, current and historical vegetation cover (and therefore also plant-derived soil organic matter) is produced from C3 photosynthesis so the difference in δ13C between the autotrophic and heterotrophic CO2 sources is small. Successful partitioning therefore requires accurate and precise measurements of the δ13CO2 of the autotrophic and heterotrophic end-members (obtained by measuring the δ13CO2 of soil-free roots and root-free soil) and of total soil CO2 efflux. There is currently little consensus on the optimum measurement protocols. Here we systematically tested some of the most commonly used techniques to identify and minimise methodological errors. Using soil-surface chambers to sample total CO2 efflux and a cavity ring-down spectrometer to measure δ13CO2 in a partitioning study on a Scottish moorland, we found that: using soil-penetrating collars leads to a more depleted chamber measurement of total soil δ13CO2 as a result of severing roots and fungal hyphae or equilibrating with δ13CO2 at depth or both; root incubations provide an accurate estimate of in-situ root respired δ13CO2 provided they are sampled within one hour; the δ13CO2 from root-free soil changes rapidly during incubation and even CO2 sampled very soon after excavation is unlikely to give an accurate estimate of the heterotrophic isotope end-member, to solve this we applied non-linear regressions to the change in δ13CO2 with time to derive the heterotrophic end-member in undisturbed soil.

Three-year decline of magmatic CO2 emissions from soils of a Mammoth Mountain tree kill: Horseshoe Lake, CA, 1995-1997

USGS Publications Warehouse

Gerlach, T.M.; Doukas, M.P.; McGee, K.A.; Kessler, R.

1998-01-01

We used the closed chamber method to measure soil CO2 efflux over a three-year period at the Horseshoe Lake tree kill (HLTK) - the largest tree kill on Mammoth Mountain in central eastern California. Efflux contour maps show a significant decline in the areas and rates of CO2 emission from 1995 to 1997. The emission rate fell from 350 t d-1 (metric tons per day) in 1995 to 130 t d-1 in 1997. The trend suggests a return to background soil CO2 efflux levels by early to mid 1999 and may reflect exhaustion of CO2 in a deep reservoir of accumulated gas and/or mechanical closure or sealing of fault conduits transmitting gas to the surface. However, emissions rose to 220 t d-1 on 23 September 1997 at the onset of a degassing event that lasted until 5 December 1997. Recent reservoir recharge and/or extension-enhanced gas flow may have caused the degassing event.

Soil respiration dynamics in the middle taiga of Central Siberia region

NASA Astrophysics Data System (ADS)

Makhnykina, Anastasia; Prokushkin, Anatoly; Polosukhina, Daria

2017-04-01

A large amount of carbon in soil is released to the atmosphere through soil respiration, which is the main pathway of transferring carbon from terrestrial ecosystems (Comstedt et al., 2011). Considering that boreal forests is a large terrestrial sink (Tans et al., 1990) and represent approximately 11 % of the Earth's total land area (Gower et al., 2001), even a small change in soil respiration could significantly intensify - or mitigate - current atmospheric increases of CO2, with potential feedbacks to climate change. The objectives of the present study are: (a) to study the dynamic of CO2 emission from the soil surface during summer season (from May to October); (b) to identify the reaction of soil respiration to different amount of precipitation as the main limiting factor in the region. The research was located in the pine forests in Central Siberia (60°N, 90°E), Russia. Sample plots were represented by the lichen pine forest, moss pine forest, mixed forest and anthropogenic destroyed area. We used the automated soil CO2 flux system based on the infrared gas analyzer -LI-8100 for measuring the soil efflux. Soil temperature was measured with Soil Temperature Probe Type E in three depths -5, 10, 15 cm. Volumetric soil moisture was measured with Theta Probe Model ML2. The presence and type of ground cover substantially affects the value of soil respiration fluxes. The carbon dioxide emission from the soil surface averaged 5.4 ±2.3 μmol CO2 m-2 s-1. The destroyed area without plant cover demonstrated the lowest soil respiration (0.1-5.6 μmol CO2 m-2 s-1). The lowest soil respiration among forested areas was observed in the feathermoss pine forest. The lichen pine forest was characterized by the intermediate values of soil respiration. The maximum soil respiration values and seasonal fluctuations were obtained in the mixed forest (2.3-29.3 μmol CO2 m-2 s-1). The analysis of relation between soil CO2 efflux and climatic conditions identified the parameters with highest soil efflux rates. The influence of soil temperature on the soil CO2 efflux showed that an increase of soil efflux was observed from 0 °C to 16 °C. The temperature of more than 16 °C led to the inhibition of soil respiration process. The investigation of relationship between soil CO2 efflux and soil moisture revealed that the moisture from 0 to 0.3 m-3m-3 resulted in an increase of soil efflux. The moisture of more than 0.3 m-3m-3 led to the inhibition of soil respiration. Our study suggested that the decline of the rainfall and increase of temperature due to climate change could significantly decrease the CO2 emission from the Siberian boreal forests.

Variation in foliar respiration and wood CO2 efflux rates among species and canopy layers in a wet tropical forest.

PubMed

Asao, Shinichi; Bedoya-Arrieta, Ricardo; Ryan, Michael G

2015-02-01

As tropical forests respond to environmental change, autotrophic respiration may consume a greater proportion of carbon fixed in photosynthesis at the expense of growth, potentially turning the forests into a carbon source. Predicting such a response requires that we measure and place autotrophic respiration in a complete carbon budget, but extrapolating measurements of autotrophic respiration from chambers to ecosystem remains a challenge. High plant species diversity and complex canopy structure may cause respiration rates to vary and measurements that do not account for this complexity may introduce bias in extrapolation more detrimental than uncertainty. Using experimental plantations of four native tree species with two canopy layers, we examined whether species and canopy layers vary in foliar respiration and wood CO2 efflux and whether the variation relates to commonly used scalars of mass, nitrogen (N), photosynthetic capacity and wood size. Foliar respiration rate varied threefold between canopy layers, ∼0.74 μmol m(-2) s(-1) in the overstory and ∼0.25 μmol m(-2) s(-1) in the understory, but little among species. Leaf mass per area, N and photosynthetic capacity explained some of the variation, but height explained more. Chamber measurements of foliar respiration thus can be extrapolated to the canopy with rates and leaf area specific to each canopy layer or height class. If area-based rates are sampled across canopy layers, the area-based rate may be regressed against leaf mass per area to derive the slope (per mass rate) to extrapolate to the canopy using the total leaf mass. Wood CO2 efflux varied 1.0-1.6 μmol m(-2) s(-1) for overstory trees and 0.6-0.9 μmol m(-2) s(-1) for understory species. The variation in wood CO2 efflux rate was mostly related to wood size, and little to species, canopy layer or height. Mean wood CO2 efflux rate per surface area, derived by regressing CO2 efflux per mass against the ratio of surface area to mass, can be extrapolated to the stand using total wood surface area. The temperature response of foliar respiration was similar for three of the four species, and wood CO2 efflux was similar between wet and dry seasons. For these species and this forest, vertical sampling may yield more accurate estimates than would temporal sampling. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Kinetic bottlenecks to chemical exchange rates for deep-sea animals - Part 2: Carbon Dioxide

NASA Astrophysics Data System (ADS)

Hofmann, A. F.; Peltzer, E. T.; Brewer, P. G.

2013-04-01

Increased ocean acidification from fossil fuel CO2 invasion, from temperature-driven changes in respiration, and from possible leakage from sub-seabed geologic CO2 disposal has aroused concern over the impacts of elevated CO2 concentrations on marine life. Discussion of these impacts has so far focused only on changes in the oceanic bulk fluid properties (ΔpH, Δ[∑ CO2], etc.) as the critical variable and with a major focus on carbonate shell formation. Here we describe the rate problem for animals that must export CO2 at about the same rate at which O2 is consumed. We analyse the basic properties controlling CO2 export within the diffusive boundary layer around marine animals in an ocean changing in temperature (T) and CO2 concentration in order to compare the challenges posed by O2 uptake under stress with the equivalent problem of CO2 expulsion. The problem is more complex than that for a non-reactive gas, since with CO2 the influence of the seawater carbonate acid-base system needs to be considered. These reactions significantly facilitate CO2 efflux compared to O2 intake at equal temperature, pressure and fluid flow rate under typical oceanic concentrations. The effect of these reactions can be described by an enhancement factor, similar to that widely used for CO2 invasion at the sea surface. While organisms do need to actively regulate flow over their surface to thin the boundary layer to take up enough O2, this seems to be not necessary to facilitate CO2 efflux. Instead, the main impacts of rising oceanic CO2 will most likely be those associated with classical ocean acidification science. Regionally, as with O2, the combination of T, P and pH/pCO2 creates a zone of maximum CO2 stress at around 1000 m depth.

Carbon dioxide efflux from a 550 m3 soil across a range of soul temperatues

Treesearch

Ramesh Murthy; Kevin L. Griffin; Stanley J. Zarnoch; Philip M. Dougherty; Barbara Watson; Joost Van Haren; Randy L. Patterson; Tilka Mahato

2003-01-01

Because of scaling problems point measurements of soil CO2 efflux on a small volume of soil may not necessarily reflect an overall community response. The aim of this study was to test this hypothesis in the Biosphere 2 facility and achieve the following broad goals: (1) investigate soil net CO2 exchange–temperature...

Effect of soil compaction and biomass removal on soil CO2 efflux in a Missouri forest

Treesearch

Felix, Jr. Ponder

2005-01-01

Forest disturbances associated with harvesting activities can affect soil properties and soil respiration. A soda-lime technique was used to measure soil carbon dioxide (CO2) efflux rates in clearcut plots of a Missouri oak-hickory (Quercus spp. L.-Carya spp. Nutt.) forest 4 years after being treated with two levels of forest...

Soil CO2 efflux in loblolly pine (Pinus taeda L.) plantations on the virginia Piedmond and South Carolina coastal plain over a rotation-length chronosequence

Treesearch

Christopher M. Gough; John R. Seiler; P. Eric Wiseman; Christopher A. Maier

2005-01-01

We measured soil surface CO2 efflux (Fx) in loblolly pine stands (Pinus taeda L.) located on the Virginia Piedmont (VA) and South Carolina Coastal Plain (SC) in efforts to assess the impact climate, productivity, and cultural practices have on Fs in the managed loblolly pine...

Comparison of surficial CO2 efflux to other measures of subsurface crude oil degradation.

PubMed

Warren, Ean; Sihota, Natasha J; Hostettler, Frances D; Bekins, Barbara A

2014-08-01

At a spill site near Bemidji, Minnesota, crude oil at the water table has been undergoing anaerobic biodegradation for over 30years. Previous work at this site has shown that methane produced from biodegradation of the oil migrates upward and is oxidized in a methanotrophic zone midway between the water table and the surface. To compare microbial activity measurement methods from multiple locations in the oil body, surficial carbon dioxide efflux, methanogen and methanotroph concentrations, and oil degradation state were collected. Carbon dioxide effluxes over the oil body averaged more than four times those at the background site. Methanotrophic bacteria concentrations measured using pmoA were over 10(5) times higher above the oil-contaminated sediments compared with the background site. Methanogenic archaea measured using mcrA ranged from 10(5) to over 10(7) in the oil and were below detection in the background. Methanogens correlated very well with methanotroph concentrations (r=0.99), n-alkylcyclohexane losses as a proxy for degradation state (r=-0.96), and somewhat less well with carbon dioxide efflux (r=0.92). Carbon dioxide efflux similarly correlated to methanotroph concentrations (r=0.90) and n-alkylcyclohexane losses (r=-0.91). Published by Elsevier B.V.

Comparison of surficial CO2 efflux to other measures of subsurface crude oil degradation

USGS Publications Warehouse

Warren, Ean; Sihota, Natasha J.; Hostettler, Frances D.; Bekins, Barbara A.

2014-01-01

At a spill site near Bemidji, Minnesota, crude oil at the water table has been undergoing anaerobic biodegradation for over 30 years. Previous work at this site has shown that methane produced from biodegradation of the oil migrates upward and is oxidized in a methanotrophic zone midway between the water table and the surface. To compare microbial activity measurement methods from multiple locations in the oil body, surficial carbon dioxide efflux, methanogen and methanotroph concentrations, and oil degradation state were collected. Carbon dioxide effluxes over the oil body averaged more than four times those at the background site. Methanotrophic bacteria concentrations measured using pmoA were over 105 times higher above the oil-contaminated sediments compared with the background site. Methanogenic archaea measured using mcrA ranged from 105 to over 107 in the oil and were below detection in the background. Methanogens correlated very well with methanotroph concentrations (r = 0.99), n-alkylcyclohexane losses as a proxy for degradation state (r = − 0.96), and somewhat less well with carbon dioxide efflux (r = 0.92). Carbon dioxide efflux similarly correlated to methanotroph concentrations (r = 0.90) and n-alkylcyclohexane losses (r = − 0.91).

Long– and short-term precipitation effects on soil CO2 efflux and total belowground carbon allocation

Treesearch

Chelcy R. Ford; Jason McGee; Francesca Scandellari; Erik A. Hobbie; Robert J. Mitchell

2012-01-01

Soil CO2 efflux (Esoil), the main pathway of C movement from the biosphere to the atmosphere, is critical to the terrestrial C cycle but how precipitation and soil moisture influence Esoil remains poorly understood. Here, we irrigated a longleaf pine wiregrass savanna for six years; this increased soil moisture by 41.2%. We tested how an altered precipitation regime...

Can current moisture responses predict soil CO2 efflux under altered precipitation regimes? A synthesis of manipulation experiments

Treesearch

S. Vicca; M. Bahn; M. Estiarte; E. E. van Loon; R. Vargas; G. Alberti; P. Ambus; M. A. Arain; C. Beier; L. P. Bentley; W. Borken; N. Buchmann; S. L. Collins; G. de Dato; J. S. Dukes; C. Escolar; P. Fay; G. Guidolotti; P. J. Hanson; A. Kahmen; G. Kröel-Dulay; T. Ladreiter-Knauss; K. S. Larsen; E. Lellei-Kovacs; E. Lebrija-Trejos; F. T. Maestre; S. Marhan; M. Marshall; P. Meir; Y. Miao; J. Muhr; P. A. Niklaus; R. Ogaya; J. Peñuelas; C. Poll; L. E. Rustad; K. Savage; A. Schindlbacher; I. K. Schmidt; A. R. Smith; E. D. Sotta; V. Suseela; A. Tietema; N. van Gestel; O. van Straaten; S. Wan; U. Weber; I. A. Janssens

2014-01-01

As a key component of the carbon cycle, soil CO2 efflux (SCE) is being increasingly studied to improve our mechanistic understanding of this important carbon flux. Predicting ecosystem responses to climate change often depends an extrapolation of current relationships between ecosystem processes and their climatic drivers to conditions not yet experienced by the...

Seasonal patterns in carbon dioxide in 15 mid-continent (USA) reservoirs

USGS Publications Warehouse

Jones, John R.; Obrecht, Daniel V.; Graham, Jennifer L.; Balmer, Michelle B.; Filstrup, Christopher T.; Downing, John A.

2016-01-01

Evidence suggests that lakes are important sites for atmospheric CO2 exchange and so play a substantial role in the global carbon budget. Previous research has 2 weaknesses: (1) most data have been collected only during the open-water or summer seasons, and (2) data are concentrated principally on natural lakes in northern latitudes. Here, we report on the full annual cycle of atmospheric CO2 exchanges of 15 oligotrophic to eutrophic reservoirs in the Glacial Till Plains of the United States. With one exception, these reservoirs showed an overall loss of CO2 during the year, with most values within the lower range reported for temperate lakes. There was a strong cross-system seasonal pattern: an average of 70% of total annual CO2 efflux occurred by the end of spring mixis; some 20% of annual flux was reabsorbed during summer stratification; and the remaining 50% of efflux was lost during autumnal mixing. Net annual flux was negatively correlated with depth and positively correlated with both water residence time and DOC, with the smallest annual CO2 efflux measured in shallow fertile impoundments. Strong correlations yield relationships allowing regional up-scaling of CO2 evasion. Understanding lacustrine CO2 uptake and evasion requires seasonal analyses across the full range of lake trophic states and morphometric attributes.

Effect of crustose lichen on soil CO2 efflux in sphagnum moss regime of tundra, west Alaska

NASA Astrophysics Data System (ADS)

Kim, Y.; Park, S. J.; Suzuki, R.; Lee, B. Y.

2017-12-01

Increasing ambient temperatures across the Arctic have induced changes in plant extent and phenology, degradation of permafrost, snow depth and covered extent, decomposition of soil organic matter, and subsequently, soil carbon emission to the atmosphere. However, there is fully not understood on the effect of crustose lichen on soil CO2 emission to the atmosphere. Although the spores of lichen are spread by wind and animals, the crustose lichen is infected to the only sphagnum moss widely distributed in the Arctic, and is terminally killed the moss. Here, we report the research findings on the soil CO2 efflux-measurement with forced diffusion (FD) chamber system that is continuously monitored in sphagnum moss regime of west Alaska for the growing season of 2016. The environmental parameters (e.g., soil temperature and moisture) were measured at intact and infected sphagnum moss regime. The FD chamber is measured at an interval of 10-min and 30-min, which is not significant difference between both intervals (R2 = 0.94; n = 1360; RMSE = 0.043; p < 0.001) based on a one-way ANOVA at the 95% confidence level. Mean soil CO2 effluxes (standard deviation) in June, July, August, and September of 2016 were 0.47(0.22), 0.52(0.21), 0.55(0.31), and 0.32(0.54) in infected sphagnum moss, and 0.27(0.47), 0.45(0.17), 0.50(0.22), and 0.31(0.49) in intact sphagnum moss, respectively. This finding demonstrates that 1) soil CO2 in infected sphagnum moss is one of atmospheric CO2 source in June and July, and 2) soil CO2 efflux is not significant difference between both regimes for August and September of 2016.

Diffuse CO2 degassing monitoring for the volcanic surveillance of Tenerife North-East Rift Zone (NERZ) volcano, Canary Islands

NASA Astrophysics Data System (ADS)

Rodríguez, F.; Thomas, G. E.; Wong, T.; García, E.; Melián, G.; Padron, E.; Asensio-Ramos, M.; Hernández, P. A.; Perez, N. M.

2017-12-01

The North East Rift zone of Tenerife Island (NERZ, 210 km2) is one of the three major volcanic rift-zones of the island. The most recent eruptive activity along the NERZ took place in the 1704-1705 period with eruptions of Siete Fuentes, Fasnia and Arafo volcanoes. Since fumarolic activity is nowadays absent at the NERZ, soil CO2 degassing monitoring represent a potential geochemical tool for its volcanic surveillance. The aim of this study is to report the results of the last CO2 efflux survey performed in June 2017, with 658 sampling sites. In-situ measurements of CO2 efflux from the surface environment of the NERZ were performed by means of a portable non-dispersive infrared spectrophotometer (NDIR) following the accumulation chamber method. To quantify the total CO2 emission, soil CO2 efflux spatial distribution maps were constructed using Sequential Gaussian Simulation (SGS) as interpolation method. The diffuse CO2 emission values ranged between 0 - 41.1 g m-2 d-1. The probability plot technique applied to the data allowed to distinguish two different geochemical populations; background (B) and peak (P) represented by 81.8% and 18.2% of the total data, respectively, with geometric means of 3.9 and 15.0 g m-2 d-1, respectively. The average map constructed with 100 equiprobable simulations showed an emission rate of 1,361±35 t d-1. This value relatively higher than the background average of CO2 emission estimated on 415 t d-1 and slightly higher than the background range of 148 t d-1 (-1σ) and 1,189 t d-1 (+1σ) observed at the NERZ. This study reinforces the importance of performing soil CO2 efflux surveys as an effective surveillance volcanic tool in the NERZ.

Precipitation pulse dynamics of carbon sequestration and efflux in highly weatherable soils

NASA Astrophysics Data System (ADS)

Barron-Gafford, G.; Minor, R.; Van Haren, J. L.; Dontsova, K.; Troch, P. A.

2013-12-01

Soils are the primary pool for terrestrial carbon on Earth, and loss of that carbon to the atmosphere or hydrosphere represents a significant efflux that can impact a host of other downstream processes. Soil respiration (Rsoil), the efflux of CO2 to the atmosphere, represents the major pathway by which carbon is lost from the soil system in more weathered soils. However, in newly formed soils, chemical weathering can significantly deplete soil CO2 concentrations. As vegetation colonizes these soils, multiple interacting and contradictory pathways evolve such that soil CO2 concentrations increase in response to plant inputs but are decreased through chemical reactions. Furthermore, abiotic drivers of soil temperature and moisture likely differentially affect these processes. Understanding the bio-geo-chemical drivers and feedbacks associated with soil CO2 production and efflux in the critical zone necessitates an integrated science approach, drawing on input from plant physiologists, bio- and geochemists, and hydrologists. Here, we created a series of 1-meter deep mesocosms filled with granular basalt that supported either a woody mesquite shrub, a bunchgrass, or was left as bare soil. Use of multiple plant functional types allowed us to explore the impacts of plant structure (primarily rooting profiles) on critical zone function in terms of water and carbon exchange surrounding precipitation pulse dynamics. Each mesocosm was outfitted with an array of soil moisture, temperature, water potential, and CO2 concentration sensors at the near-surface, 30, 55, and 80cm depths to quantify patterns of soil moisture and respiratory CO2 efflux in response to rainfall events of varying magnitude and intervening periods of drought. Five replicates of each were maintained under current ambient or projected (+4oC) air temperatures. In addition, we used minirhizotrons to quantify the response of roots to episodic rainfall and confirm differences among plant types and collected soils solution samples to quantify dissolved inorganic carbon (DIC), pH, and other solute concentrations. Importantly, we found Rsoil dynamics to be nearly in direct contrast to our classic understanding of patterns of soil CO2 efflux after rain events. Rsoil rates declined immediately upon wetting and gradually increased to pre-rain rates as the soils dried. Investigation into soil CO2 profile data showed that CO2 concentrations just below the surface declined significantly from near-ambient levels to near ~50ppm, which would directly impact rates of Rsoil. We detected differences among plant functional types in terms of rooting depth, water use, photosynthetic uptake, base rates of Rsoil, the time required to return to pre-rain rates of Rsoil, and the rates of soil weathering. Combining aboveground measurements of carbon uptake with these belowground estimates of carbon pools and efflux will allow us to make much more informed projections of carbon dynamics within highly weatherable soils across a range of global climate change projections and plant functional types.

Soil respiration and aboveground litter dynamics of a tropical transitional forest in northwest Mato Grosso, Brazil

NASA Astrophysics Data System (ADS)

Valentini, Carla Maria Abido; Sanches, Luciana; de Paula, SéRgio Roberto; Vourlitis, George Louis; de Souza Nogueira, José; Pinto, Osvaldo Borges; de Almeida Lobo, Francisco

2008-03-01

Measurements of soil CO2 efflux, litter production, and the surface litter pool biomass were made over a 1 year period in a tropical transitional forest near Sinop, Mato Grosso, Brazil with the aim of quantifying the seasonal variation in soil respiration and litter decomposition and the annual contribution of litter decomposition to soil CO2 efflux. Average annual soil CO2 efflux (±95% confidence interval (CI)) was 7.91 ± 1.16 g C m-2 d-1. Soil CO2 efflux was highest during the November-February wet season (9.15 ± 0.90 g C m-2 d-1) and lowest during the May-September dry season (6.19 ± 1.40 g C m-2 d-1), and over 60% of the variation in seasonal soil CO2 efflux was explained by seasonal variations in soil temperature and moisture. Mass balance estimates of mean (±95% CI) decomposition rates were statistically different between the wet and dry seasons (0.66 ± 0.08 and 1.65 ± 0.10 g C m-2 d-1, respectively), and overall, decomposition of leaf litter comprised 16% of the average annual soil respiration. Leaf litter production was higher during the dry season, and mean (±95% CI) leaf litter fall (5.6 ± 1.7 Mg ha-1) comprised 73% of the total litter fall (7.8 ± 2.3 Mg ha-1). Average (±95% CI) annual litter pool biomass was estimated to be 5.5 ± 0.3 Mg ha-1, which was similar to the measured pool size (5.7 ± 2.2 Mg ha-1). Overall, seasonal variations in environmental variables, specifically water availability (soil moisture and rainfall), had a profound influence on litter production, soil respiration, and surface litter decomposition.

Soil Carbon Budget During Establishment of Short Rotation Woody Crops

NASA Astrophysics Data System (ADS)

Coleman, M. D.

2003-12-01

Carbon budgets were monitored following forest harvest and during re-establishment of short rotation woody crops. Soil CO2 efflux was monitored using infared gas analyzer methods, fine root production was estimated with minirhizotrons, above ground litter inputs were trapped, coarse root inputs were estimated with developed allometric relationships, and soil carbon pools were measured in loblolly pine and cottonwood plantations. Our carbon budget allows evaluation of errors, as well as quantifying pools and fluxes in developing stands during non-steady-state conditions. Soil CO2 efflux was larger than the combined inputs from aboveground litter fall and root production. Fine-root production increased during stand development; however, mortality was not yet equivalent to production, showing the belowground carbon budget was not yet in equilibrium and root carbon standing crop was accruing. Belowground production was greater in cottonwood than pine, but the level of pine soil CO2 efflux was equal to or greater than that of cottonwood, indicating heterotrophic respiration was higher for pine. Comparison of unaccounted efflux with soil organic carbon changes provides verification of loss or accrual.

Precursory diffuse carbon dioxide degassing signature related to a 5.1 magnitude earthquake in El Salvador, Central America

NASA Astrophysics Data System (ADS)

Salazar, J. M. L.; Pérez, N. M.; Hernández, P. A.; Soriano, T.; Barahona, F.; Olmos, R.; Cartagena, R.; López, D. L.; Lima, R. N.; Melián, G.; Galindo, I.; Padrón, E.; Sumino, H.; Notsu, K.

2002-12-01

Anomalous changes in the diffuse emission of carbon dioxide have been observed before some of the aftershocks of the 13 February 2001 El Salvador earthquake (magnitude 6.6). A significant increase in soil CO 2 efflux was detected 8 days before a 5.1 magnitude earthquake on 8 May 2001 25 km away from the observation site. In addition, pre- and co-seismic CO 2 efflux variations have also been observed related to the onset of a seismic swarm beneath San Vicente volcano on May 2001. Strain changes and/or fluid pressure fluctuations prior to earthquakes in the crust are hypothesized to be responsible for the observed variations in gas efflux at the surface environment of San Vicente volcano.

Precursory diffuse CO2 emission signature of the 2011 El Hierro submarine eruption, Canary Islands

NASA Astrophysics Data System (ADS)

Pérez, N. M.; Padilla, G. D.; Padrón, E.; Hernández, P. A.; Melián, G. V.; Barrancos, J.; Dionis, S.; Rodríguez, F.; Nolasco, D.; Calvo, D.; Hernández, I.; Peraza, M. D.

2012-04-01

El Hierro is the youngest and southernmost island of the Canarian archipelago and represents the summit of a volcanic shield elevating from the surrounding seafloor at depth of 4000 m to up to 1501 m above sea level. The island is believed to be near the present hotspot location in the Canaries with the oldest subaerial rocks dated at 1.12 Ma. The subaerial parts of the El Hierro rift zones (NE, NW and S Ridges) are characterized by tightly aligned dyke complexes with clusters of cinder cones as their surface expressions. Since 16 July, an anomalous seismicity at El Hierro Island was recorded by IGN seismic network. Volcanic tremor started at 05:15 on 10 October, followed on the afternoon of 12 October by a green discolouration of seawater, strong bubbling and degassing, and abundant bombs on a decimetre scale found floating on the ocean surface offshore, southwest of La Restinga village, indicating the occurrence of a submarine volcanic eruption at approximately 2 km far the coast line of La Restinga. Further episodes have occurred during November, December 2011 and January 2012, with turbulent water, foam rings, and volcanic material again reaching the sea surface. In order to improve the volcanic surveillance program of El Hierro Island and to provide a multidisciplinary approach, a continuous geochemical station to measure CO2 efflux was installed on September 2003 in Llanos de Guillen, the interception center of the three volcanic-rift zones of the island, with the aim of detecting changes in the diffuse emission of CO2 related to the seismic or volcanic activity. The station measures on an hourly basis the CO2 and H2S efflux, the CO2 and H2S air concentrations, the soil water content and temperature and the atmospheric parameters: wind speed and direction, air temperature and humidity and barometric pressure. The meteorological parameters together with the air CO2 concentration are measured 1 m above the ground and the soil water content and soil temperature are measured 40-cm deep, and recorded contemporaneously with CO2 efflux. Although time series of CO2 efflux showed background (4-5 g m-2 d-1) values before the July 16, when the seismic unrest started, and still August 30, some significant increases up to 10 g m-2 d-1 was measured prior the occurrence of peaks on the seismic energy release. Since the end of August, coinciding with a migration of the hypocenters of the seismic activity toward the south part of the island, the CO2 efflux time series started a relatively constant increase during 1 month, reaching a maximum of 19 g m-2 d-1 one week before the occurrence of the submarine volcanic eruption. Since October 5 till present, including the whole eruptive period, the CO2 efflux time series have shown a general decrease trend but with some significant emission peaks prior the occurrence of important seismic energy release episodes. This station has revealed as an important observation point to evaluate the volcanic activity of El Hierro Island since diffuse degassing of carbon dioxide seems to be associated with fluid pressure fluctuations in the volcanic system. These results demonstrated the potential of applying continuous monitoring of soil CO2 efflux to improve and optimize the detection of early warning signals of future volcanic unrest episodes at El Hierro.

Reindeer grazing in subarctic boreal forest - influences on the soil carbon dynamics

NASA Astrophysics Data System (ADS)

Koster, Kajar; Berninger, Frank; Köster, Egle; Pumpanen, Jukka

2015-04-01

Reindeer (Rangifer tarandus L.) are the most important large mammalian herbivores in the northern ecosystems , which have many effects on plant diversity, soil nutrient cycling and soil organic matter decomposition. Changes caused by reindeer in vegetation have indirect effects on physical features of the soil e.g. soil microclimate, root biomass and also on soil C dynamics. Earlier, the role of reindeer grazing in ground vegetation dynamics and in soil carbon (C) dynamics has been mostly investigated in open tundra heaths. The objectives of this study were to examine if and how the reindeer grazing (and the possible temperature changes in soil caused by heavy grazing) is affecting the soil C dynamics (CO2 efflux from the soil, C storage in soil, microbial biomass in the soil). In a field experiment in Finnish Lapland, in Värriö Strict Nature Reserve (67° 46' N, 29° 35' E) we have assessed the changes occurring in above- and belowground biomasses, and soil C dynamics (CO2 efflux, soil C content, soil microbial biomass C) among areas grazed and ungrazed by reindeer. Our study areas are located in the northern boreal subarctic coniferous forest at the zone of the last intact forest landscapes in Fennoscandia, where large areas of relatively undisturbed subarctic Scots pine (Pinus sylvestris L.) forests can still be found. The sample plots located in the Värriö Strict Nature Reserve (10 sample plots in total established in year 2013) are situated along the borderline between Finland and Russia, where the ungrazed area was excluded from the reindeer grazing already in 1918, to prevent the Finnish reindeer from going to the Russian side and there are not many reindeer on Russian side of the area. To characterize the stands we have established circular sample plots on areas with a radius of 11.28 m, where different tree characteristics were measured (diameter at 1.3 m, height, height of a tree, crown height, crown diameter, stand age, etc.). On every sample plot, four 0.5 x 0.5 m ground vegetation squares were established for species composition and recovery measurements. The squares were photographed for ground vegetation coverage analyses and definition of species composition. Ground vegetation biomass was determined from 4 sample squares (0.2 x 0.2 m) located systematically inside the circular sample plots (close to the ground vegetation squares). For soil C content measurements 5 soil cores (150 mm in length and 50 mm in diameter) were taken from every sample plot in Värriö and in Sodankylä. The soil cores were divided according to the morphological soil horizons; to litter and organic layer (F-horizon) and humus layer (O-horizon). The layers in mineral soil were divided to eluvial (A-horizon) and illuvial (B-horizon), and sieved. All roots were separated for root biomass calculations. The soil C content was measured with an elemental analyser (varioMAX CN elemental analyser, Elementar Analysensysteme GmbH, Germany). The soil respiration rates were measured only in Värriö study areas. In order to determine the CO2 efflux from soil to atmosphere, manual chamber measurements with a diffusion type CO2 probe (GMP343), were performed on 6 collars at each sample plot from June till September (five times per collar) at measuring intervals of two weeks. Soil microbial biomass was measured from five soil samples (soil from lower humus layer) per sample plot in Värriö. To determine the soil microbial C biomass (Cmic) and soil microbial N biomass (Nmic) chloroform fumigation direct extraction method was used. The average soil temperatures during the growing season (from June till September) were similar in all sample plots in Värriö, ranging from 10.9 to 11.5 ° C. There were also no differences between daily average temperatures or soil moisture between grazed and ungrazed areas. There was no statistically significant effect of reindeer grazing on soil C content, although it was mainly higher in grazed area compared to the ungrazed area. Also there was no significant differences in the soil CO2 efflux between the grazed and ungrazed area. This means that although the soil CO2 efflux was mostly lower in the ungrazed area, reindeer herding had no significant influence on the soil CO2 efflux. The CO2 effluxes were lowest in June. In July and August, the CO2 effluxes were more than two times higher compared to June. The microbial biomass C (Cmic) measured from humus horizon was lower in the grazed areas compared to the ungrazed areas, but the difference was not statistically significant. However, the microbial biomass N (Nmic) was significantly lower (p > 0.05) in the grazed areas compared to the ungrazed areas. We found also that grazing decreased significantly the biomass and cover of lichens in the coniferous forests. In Sodankylä the biomass of lichens was decreased around 74% due to grazing. In Värriö the decrease was even bigger, there the amount of lichen biomass was decreased more than 90% due to reindeer grazing. Ttal above ground biomass was higher in the area where no reindeer grazing had occurred. Moreover, the tree biomass was higher in the area with no grazing and tree regeneration was heavily affected by grazing, as we had much less tree regeneration in the grazed areas compared to the ungrazed areas.

Impact of heme oxygenase-1 on cholesterol synthesis, cholesterol efflux and oxysterol formation in cultured astroglia.

PubMed

Hascalovici, Jacob R; Song, Wei; Vaya, Jacob; Khatib, Soliman; Fuhrman, Bianca; Aviram, Michael; Schipper, Hyman M

2009-01-01

Up-regulation of heme oxygenase-1 (HO-1) and altered cholesterol (CH) metabolism are characteristic of Alzheimer-diseased neural tissues. The liver X receptor (LXR) is a molecular sensor of CH homeostasis. In the current study, we determined the effects of HO-1 over-expression and its byproducts iron (Fe(2+)), carbon monoxide (CO) and bilirubin on CH biosynthesis, CH efflux and oxysterol formation in cultured astroglia. HO-1/LXR interactions were also investigated in the context of CH efflux. hHO-1 over-expression for 3 days ( approximately 2-3-fold increase) resulted in a 30% increase in CH biosynthesis and a two-fold rise in CH efflux. Both effects were abrogated by the competitive HO inhibitor, tin mesoporphyrin. CO, released from administered CORM-3, significantly enhanced CH biosynthesis; a combination of CO and iron stimulated CH efflux. Free iron increased oxysterol formation three-fold. Co-treatment with LXR antagonists implicated LXR activation in the modulation of CH homeostasis by heme degradation products. In Alzheimer's disease and other neuropathological states, glial HO-1 induction may transduce ambient noxious stimuli (e.g. beta-amyloid) into altered patterns of glial CH homeostasis. As the latter may impact synaptic plasticity and neuronal repair, modulation of glial HO-1 expression (by pharmacological or other means) may confer neuroprotection in patients with degenerative brain disorders.

Are closed landfills free of CH_{4} emissions? A case study of Arico's landfill, Tenerife, Canary Islands

NASA Astrophysics Data System (ADS)

Barrancos, José; Cook, Jenny; Phillips, Victoria; Asensio-Ramos, María; Melián, Gladys; Hernández, Pedro A.; Pérez, Nemesio M.

2016-04-01

Landfills are authentic chemical and biological reactors that introduce in the environment a wide amount of gas pollutants (CO2, CH4, volatile organic compounds, etc.) and leachates. Even after years of being closed, a significant amount of landfill gas could be released to the atmosphere through the surface in a diffuse form, also known as non-controlled emission. The study of the spatial-temporal distribution of diffuse emissions provides information of how a landfill degassing takes place. The main objective of this study was to estimate the diffuse uncontrolled emission of CH4 into the atmosphere from the closed Arico's landfill (0.3 km2) in Tenerife Island, Spain. To do so, a non-controlled biogenic gas emission survey of nearly 450 sampling sites was carried out during August 2015. Surface gas sampling and surface landfill CO2 efflux measurements were carried out at each sampling site by means of a portable non-dispersive infrared spectrophotometer (NDIR) model LICOR Li800 following the accumulation chamber method. Landfill gases, CO2 and CH4, were analyzed using a double channel VARIAN 4900 micro-GC. The CH4 efflux was computed combining CO2 efflux and CH4/CO2 ratio in the landfill's surface gas. To quantify the total CH4 emission, CH4 efflux contour map was constructed using sequential Gaussian simulation (sGs) as interpolation method. The total diffuse CH4 emission was estimated in 2.2 t d-1, with CH4 efflux values ranging from 0-922 mg m-2 d-1. This type of studies provides knowledge of how a landfill degasses and serves to public and private entities to establish effective systems for extraction of biogas. This aims not only to achieve higher levels of controlled gas release from landfills resulting in a higher level of energy production but also will contribute to minimize air pollution caused by them.

Carbon Dioxide Impacts in the Deep-Sea: Is Maintaining a Metabolically Required CO2 Efflux Rate Challenging?

NASA Astrophysics Data System (ADS)

Peltzer, E. T.; Hofmann, A. F.; Brewer, P. G.

2011-12-01

Increasing ocean acidification from fossil fuel CO2 invasion, from temperature driven changes in respiration, and from possible leakage from sub-seabed geologic CO2 disposal has aroused concern over the impacts of elevated CO2 concentrations on marine life. Here we describe the rate problem for animals who must export CO2 at about the same rate at which O2 is consumed. We analyze the basic properties controlling CO2 export within the diffusive boundary of marine animals in a changing ocean in order to compare the challenges posed by O2 uptake under stress with the equivalent problem of CO2 expulsion. The problem is more complex than that for a non-reactive gas since, as with gas exchange of CO2 at the air-sea interface, the influence of the ensemble of reactions within the CO2 - HCO3- - CO3= acid-base system needs to be considered. These reactions appear as an enhancement factor which significantly facilitates CO2 efflux compared to O2 intake at equal temperature, pressure and flow rate under typical oceanic concentrations. Possibly as an adaptation to this chemical advantage marine animals typically can respond to external CO2 stress simply by metabolic adjustment. This is energetically more favorable than having to resort to mechanically increasing flow over their surface to thin the boundary layer as is required to alleviate O2 stress. Regionally as with O2 the combination of T, P, and pH/pCO2 creates a zone of maximum CO2 stress at around 1000 m depth. But the net result is that the combination of an increase in T combined with declining O2 poses a greater respiratory challenge to marine life than does increasing CO2. The relationships developed here allow a more accurate prediction of the impacts on marine life from the combined effects of changing T, O2, and CO2 than can be estimated from single variable studies.

Short-term variations of diffuse CO2 emission from the summit crater of Teide volcano, Tenerife, Canary Islands

NASA Astrophysics Data System (ADS)

Melián, Gladys V.; Ocampo, Stephany; Nisbet, Andrew; McKnight, Samara; Monzón, Tania; Asensio-Ramos, María; Alonso, Mar; Rodríguez, Fátima; García-Merino, Marta; Amonte, Cecilia; Pérez, Nemesio M.

2017-04-01

Teide volcano in Tenerife, Canary Islands, is characterized by the presence of a weak fumarolic system, steamy ground, and high rates of diffuse CO2 degassing all around this area. The temperature of the fumaroles (83˚ C) corresponds to the boiling point of water at discharge conditions. Previous diffuse CO2 surveys have shown to be an important tool to detect early warnings of possible impending volcanic unrests at Tenerife Island (Melián et al., 2012; Pérez et al., 2013). During June, July and August 2016, twelve soil gas surveys were performed at the summit crater of Teide volcano in order to evaluate short-term variations of diffuse CO2 degassing pattern. Soil CO2 efflux and soil temperature were always measured at the same 38 observation sites homogeneously distributed within an area of about 6,972 m2 inside the summit crater. Soil CO2 diffuse effluxes were estimated according to the accumulation chamber method and using a non-dispersive infrared (NDIR) LICOR-820 CO2analyzer. Soil CO2 efflux values presented a range from non-detectable (˜0.5 gṡm-2ṡd-1) to 10.8 kgṡm-2ṡd-1, with an average value of 2.7 kgṡm-2ṡd-1, while soil temperature ranged from 13.1 to 83.6˚ C with a mean value of 55.6˚ C. Sequential Gaussian simulations (sGs) were used for mapping and estimate the volcanic diffuse CO2 emission at each survey. The highest values of diffuse CO2 efflux were measured along the east (>8 kgṡm-2ṡd-1) and west (>5 kgṡm-2ṡd-1) sectors of the crater. Areas with highest diffuse CO2 effluxes were also characterized by a relatively high soil temperature (>60˚ C) and by an intense hydrothermal alteration. Weekly diffuse CO2 emission variations from the summit crater during the study period showed a range between 13.5 and 24.7 tṡd-1 with an average value of 18.9 tṡd-1. During these 3 months, the seismic activity rate was about 10 seismic events per month registered by the Instituto Geográfico Nacional (IGN; http://www.ign.es). We compared these observed weekly variations with monthly variations of a longer period with similar seismic rate such as 2014 (about 8 seismic events per month, and values ranged from 15.6 to 22.4 tṡd-1, and an average value of 19.0 tṡd-1. These values are in the same order than the observed during our study. However, for a longer period of observation, from 1999 to 2010, diffuse CO2 emission rates varied from 2.2 to 36.3 tṡd-1, with a mean value of 15.7 tṡd-1 (Melián et al., 2012). The long-term variations observed in the diffuse CO2 emission rates during this period of 10 years were significantly higher than short-term variations observed in the period of study. It is also important to note that the volcanic-seismic crisis of 2004 occurred with an increase on the CO2 emission from Teide summit crater (Melián et al., 2012). This study shows that during periods of seismic tranquility, diffuse CO2 emission rates will not suffer significant variations, whether performed on a weekly or monthly basis. References: Melián et al., 2012. Bull. Volcanol. DOI 10.1007/s00445-012-0613-1 Pérez et al., 2013. J. Geol. Soc. DOI 10.1144/jgs2012-125 .

Role of tangeretin as a potential bioavailability enhancer for silybin: Pharmacokinetic and pharmacological studies.

PubMed

Yuan, Zhong-Wen; Li, Ya-Zhuo; Liu, Zhong-Qiu; Feng, Sen-Ling; Zhou, Hua; Liu, Chang-Xiao; Liu, Liang; Xie, Ying

2018-02-01

Biological responses of a variety of naturally occurring compounds in vivo were restrained by their poor oral bioavailability. Silybin, as one of the active ingredients of silymarin, has presented promising bioactivity for the treatment of chronic liver diseases and cancer. However, its exposure in body was limited. In this study, silybin was demonstrated to be substrates of both BCRP and MRP2 by utilizing monolayer Caco-2 cell model and confirmed in MDCK cells overexpressing specific efflux transporter. Of all compounds screened, tangeretin, a potent inhibitor of efflux transporters of BCRP, MRP2 and P-gp, was able to enhance exposure of silybin by inhibiting functions of the barriers mediating transcellular transport. Moreover, study carried out in sandwich-cultured rat hepatocyte (SCH) model showed that the biliary excretion index (BEI) and in vitro biliary clearance of silybin decreased as levels of tangeretin increased, indicating efflux transporters mediating biliary excretion of silybin might be involved. Pharmacokinetic behaviors of silybin in rats were altered by co-administration of tangeretin, in terms of increased AUC and Cmax of silybin by comparing with that of silybin given alone. In addition, results coming from CCl 4 -induced acute liver injury rat model revealed that protection effect of silybin against liver damage in the presence of tangeretin was significantly enhanced. All these data were evident that efflux transporters play a critical role in transcellular transport of silybin and account for its low bioavailability. Enhanced bioavailability of silybin with co-administration of tangeretin by significantly inhibiting the efflux transporters further boost its bioactivity which is of particular importance in clinical use. Copyright © 2017. Published by Elsevier Ltd.

A comparison of CO2 dynamics and air-water fluxes in a river-dominated estuary and a mangrove-dominated marine estuary

NASA Astrophysics Data System (ADS)

Akhand, Anirban; Chanda, Abhra; Manna, Sudip; Das, Sourav; Hazra, Sugata; Roy, Rajdeep; Choudhury, S. B.; Rao, K. H.; Dadhwal, V. K.; Chakraborty, Kunal; Mostofa, K. M. G.; Tokoro, T.; Kuwae, Tomohiro; Wanninkhof, Rik

2016-11-01

The fugacity of CO2 (fCO2 (water)) and air-water CO2 flux were compared between a river-dominated anthropogenically disturbed open estuary, the Hugli, and a comparatively pristine mangrove-dominated semiclosed marine estuary, the Matla, on the east coast of India. Annual mean salinity of the Hugli Estuary (≈7.1) was much less compared to the Matla Estuary (≈20.0). All the stations of the Hugli Estuary were highly supersaturated with CO2 (annual mean 2200 µatm), whereas the Matla was marginally oversaturated (annual mean 530 µatm). During the postmonsoon season, the outer station of the Matla Estuary was under saturated with respect to CO2 and acted as a sink. The annual mean CO2 emission from the Hugli Estuary (32.4 mol C m-2 yr-1) was 14 times higher than the Matla Estuary (2.3 mol C m-2 yr-1). CO2 efflux rate from the Hugli Estuary has increased drastically in the last decade, which is attributed to increased runoff from the river-dominated estuary.

Nitrate and Ammonium Induced Photosynthetic Suppression in N-Limited Selenastrum minutum1

PubMed Central

Birch, Douglas G.; Elrifi, Ivor R.; Turpin, David H.

1986-01-01

The effects of nitrate and ammonium addition on net and gross photosynthesis, CO2 efflux and the dissolved inorganic carbon compensation point of nitrogen-limited Selenastrum minutum Naeg. Collins (Chlorophyta) were studied. Cultures pulsed with nitrate or ammonium exhibited a marked decrease in both net and gross photosynthetic carbon fixation. During this period of suppression the specific activity of exogenous dissolved inorganic carbon decreased rapidly in comparison to control cells indicating an increase in the rate of CO2 efflux in the light. The nitrate and ammmonium induced rates of CO2 efflux were 31.0 and 33.8 micromoles CO2 per milligram chlorophyll per hour, respectively, and represented 49 and 48% of the rate of gross photosynthesis. Nitrate addition to cells at dissolved inorganic carbon compensation point caused an increase in compensation point while ammonium had no effect. In the presence of the tricarboxylic acid cycle inhibitor fluoroacetate, the nitrate-induced change in compensation point was greatly reduced suggesting the source of this CO2 was the tricarboxylic acid cycle. These results are consistent with the mechanism of N-induced photosynthetic suppression outlined by Elrifi and Turpin (1986 Plant Physiol 81: 273-279). PMID:16665097

Bursts of CO2 released during freezing offer a new perspective on avoidance of winter embolism in trees.

PubMed

Lintunen, A; Lindfors, L; Kolari, P; Juurola, E; Nikinmaa, E; Hölttä, T

2014-12-01

Woody plants can suffer from winter embolism as gas bubbles are formed in the water-conducting conduits when freezing occurs: gases are not soluble in ice, and the bubbles may expand and fill the conduits with air during thawing. A major assumption usually made in studies of winter embolism formation is that all of the gas dissolved in the xylem sap is trapped within the conduits and forms bubbles during freezing. The current study tested whether this assumption is actually valid, or whether efflux of gases from the stem during freezing reduces the occurrence of embolism. CO2 efflux measurements were conducted during freezing experiments for saplings of three Scots pine (Pinus sylvestris) and three Norway spruce (Picea abies) trees under laboratory conditions, and the magnitudes of the freezing-related bursts of CO2 released from the stems were analysed using a previously published mechanistic model of CO2 production, storage, diffusion and efflux from a tree stem. The freezing-related bursts of CO2 released from a mature Scots pine tree growing in field conditions were also measured and analysed. Substantial freezing-related bursts of CO2 released from the stem were found to occur during both the laboratory experiments and under field conditions. In the laboratory, the fraction of CO2 released from the stem ranged between 27 and 96 % of the total CO2 content within the stem. All gases dissolved in the xylem sap are not trapped within the ice in the stem during freezing, as has previously been assumed, thus adding a new dimension to the understanding of winter embolism formation. The conduit water volume not only determines the volume of bubbles formed during freezing, but also the efficiency of gas efflux out of the conduit during the freezing process. © The Author 2014. Published by Oxford University Press on behalf of the Annals of Botany Company.

Biogeochemistry of a treeline watershed, northwestern Alaska

USGS Publications Warehouse

Stottlemyer, R.

2001-01-01

Since 1950, mean annual temperatures in northwestern Alaska have increased. Change in forest floor and soil temperature or moisture could alter N mineralization rates, production of dissolved organic carbon (DOC) and organic nitrogen (DON), and their export to the aquatic ecosystem. In 1990, we began study of nutrient cycles in the 800-ha Asik watershed, located at treeline in the Noatak National Preserve, northwestern Alaska. This paper summarizes relationships between topographic aspect, soil temperature and moisture, inorganic and organic N pools, C pools, CO2 efflux, growing season net N mineralization rates, and stream water chemistry. Forest floor (O2) C/N ratios, C pools, temperature, and moisture were greater on south aspects. More rapid melt of the soil active layer (zone of annual freeze-thaw) and permafrost accounted for the higher moisture. The O2 C and N content were correlated with moisture, inorganic N pools, CO2 efflux, and inversely with temperature. Inorganic N pools were correlated with temperature and CO2 efflux. Net N mineralization rates were positive in early summer, and correlated with O2 moisture, temperature, and C and N pools. Net nitrification rates were inversely correlated with moisture, total C and N. The CO2 efflux increased with temperature and moisture, and was greater on south aspects. Stream ion concentrations declined and DOC increased with discharge. Stream inorganic nitrogen (DIN) output exceeded input by 70%. Alpine stream water nitrate (NO-3) and DOC concentrations indicated substantial contributions to the watershed DIN and DOC budgets.

Biogeochemistry of a treeline watershed, northwestern Alaska.

PubMed

Stottlemyer, R

2001-01-01

Since 1950, mean annual temperatures in northwestern Alaska have increased. Change in forest floor and soil temperature or moisture could alter N mineralization rates, production of dissolved organic carbon (DOC) and organic nitrogen (DON), and their export to the aquatic ecosystem. In 1990, we began study of nutrient cycles in the 800-ha Asik watershed, located at treeline in the Noatak National Preserve, northwestern Alaska. This paper summarizes relationships between topographic aspect, soil temperature and moisture, inorganic and organic N pools, C pools, CO2 efflux, growing season net N mineralization rates, and stream water chemistry. Forest floor (O2) C/N ratios, C pools, temperature, and moisture were greater on south aspects. More rapid melt of the soil active layer (zone of annual freeze-thaw) and permafrost accounted for the higher moisture. The O2 C and N content were correlated with moisture, inorganic N pools, CO2 efflux, and inversely with temperature. Inorganic N pools were correlated with temperature and CO2 efflux. Net N mineralization rates were positive in early summer, and correlated with O2 moisture, temperature, and C and N pools. Net nitrification rates were inversely correlated with moisture, total C and N. The CO2 efflux increased with temperature and moisture, and was greater on south aspects. Stream ion concentrations declined and DOC increased with discharge. Stream inorganic nitrogen (DIN) output exceeded input by 70%. Alpine stream water nitrate (NO3-) and DOC concentrations indicated substantial contributions to the watershed DIN and DOC budgets.

Secular Variations of Soil CO2 Efflux at Santa Ana-Izalco-Coatepeque Volcanic Complex, El Salvador, Central America

NASA Astrophysics Data System (ADS)

Olmos, R.; Barahona, F.; Cartagena, R.; Soriano, T.; Salazar, J.; Hernandez, P.; Perez, N.; Lopez, D.

2002-12-01

The Santa Ana-Izalco-Coatepeque volcanic complex (2,365 m elevation), located 40 Km west of San Salvador, consists of the Coatepeque collapse caldera (a 6.5 x 10.5 Km elliptical depression), the Santa Ana and Izalco stratovolcanoes, as well as numerous cinder cones and explosion craters. The summit of the Santa Ana volcano contains an acid lake where hot springs, gas bubbling and intense fumarolic emissions occur. A volcanic plume, usually driven by the NE trades, may be seen rising up to 500 m from the summit crater of the Santa Ana volcano. The goal of this study is to provide a multidisciplinary approach for the volcanic surveillance by means of performing geochemical continuous monitoring of diffuse CO2 emission rate in addition to seismic monitoring. Temporal variations of soil CO2 efflux measured at Cerro Pacho dome, Coatepeque caldera, by means of the accumulation chamber method and using a CO2 efflux continuous monitoring station developed by WEST Systems (Italy). From May 2001 till May 2002, CO2 efflux ranged from 4.3 to 327 gm-2d-1, with a median value of 98 and a quartile range of 26 gm-2d-1. Two distinct diffuse CO2 degassing periods have been observed: (1) an increasing trend from May to July 2001, and (2) a stationary period from November 2001 to May 2002. The increasing-trend period may be due to the anomalous plume degassing at the Santa Ana volcano during 2001 and soon after the January and February 2001 earthquakes. Temporal variations of CO2 efllux during the second period seem to be coupled with those of barometric pressure and wind speed at different time scales, though most of the variance is contained at diurnal and semi-diurnal frequencies. These observations can help to explain the existence of a persistent behavior (Hurst exponent, H=0.934 +/- 0.0039) within the diffuse CO2 degassing phenomena. However, further observations are in progress to understand the long-term memory of diffuse CO2 degassing at the Santa Ana volcanic complex.

Seasonal patterns of carbon allocation to respiratory pools in 60-yr-old deciduous (Fagus sylvatica) and evergreen (Picea abies) trees assessed via whole-tree stable carbon isotope labeling.

PubMed

Kuptz, Daniel; Fleischmann, Frank; Matyssek, Rainer; Grams, Thorsten E E

2011-07-01

• The CO(2) efflux of adult trees is supplied by recent photosynthates and carbon (C) stores. The extent to which these C pools contribute to growth and maintenance respiration (R(G) and R(M), respectively) remains obscure. • Recent photosynthates of adult beech (Fagus sylvatica) and spruce (Picea abies) trees were labeled by exposing whole-tree canopies to (13) C-depleted CO(2). Label was applied three times during the year (in spring, early summer and late summer) and changes in the stable C isotope composition (δ(13) C) of trunk and coarse-root CO(2) efflux were quantified. • Seasonal patterns in C translocation rate (CTR) and fractional contribution of label to CO(2) efflux (F(Label-Max)) were found. CTR was fastest during early summer. In beech, F(Label-Max) was lowest in spring and peaked in trunks during late summer (0.6 ± 0.1, mean ± SE), whereas no trend was observed in coarse roots. No seasonal dynamics in F(Label-Max) were found in spruce. • During spring, the R(G) of beech trunks was largely supplied by C stores. Recent photosynthates supplied growth in early summer and refilled C stores in late summer. In spruce, CO(2) efflux was constantly supplied by a mixture of stored (c. 75%) and recent (c. 25%) C. The hypothesis that R(G) is exclusively supplied by recent photosynthates was rejected for both species. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

Diffuse CO_{2} and ^{222}Rn degassing monitoring of Ontake volcano, Japan

NASA Astrophysics Data System (ADS)

Alonso, Mar; Sagiya, Takeshi; Meneses-Gutiérrez, Ángela; Padrón, Eleazar; Hernández, Pedro A.; Pérez, Nemesio M.; Melián, Gladys; Padilla, Germán D.

2017-04-01

Mt. Ontake (3067 m.a.s.l.) is a stratovolcano located in central Honsu and around 100 Km northeast of Nagoya, Japan, with the last eruption occurring on September 27, 2014, killing 57 people, and creating a 7-10 km high ash plume (Kagoshima et. al., 2016). There were no significant earthquakes that might have warned authorities in the lead up to the phreatic eruption, caused by ground water flashing to steam in a hydrothermal explosion. At the time of the eruption there was no operational geochemical surveillance program. In order to contribute to the strengthening of this program, the Disaster Mitigation Research Center of Nagoya University and the Volcanological Institute of Canary Islands started a collaborative program. To do so, an automatic geochemical station was installed at Ontake volcano and a survey of diffuse CO2efflux and other volatiles was carried out at the surface environment of selected areas of the volcano. The station was installed 10.9 km east away from the eruptive vent, where some earthquakes occurred, and consists of a soil radon (Rn) monitor (SARAD RTM-2010-2) able to measure 222Rn and 220Rn activities. Monitoring of radon is an important geochemical tool to forecast earthquakes and volcanic eruptions due to its geochemical properties. Rn ascends from the lower to the upper part of earth's crust mainly through cracks or faults and its transport needs the existence of a naturally occurring flux of a carrier gas. Regarding to the soil gas survey, it was carried out in August 2016 with 183 measurement points performed in an area of 136 km2. Measurements of soil CO2 efflux were carried out following the accumulation chamber method by means of a portable soil CO2 efflux instrument. To estimate the total CO2 output, sequential Gaussian simulation (sGs) was used allowing the interpolation of the measured variable at not-sampled sites and assess the uncertainly of the total diffuse emission of carbon dioxide estimated for the entire studied area. The total emission rate of diffuse CO2 efflux was expressed as the mean value of 100 equiprobable sGs realizations, and its uncertainly was considered as one standard deviation of the 100 emission rates obtained after the sGs procedure. Soil CO2 efflux values ranged from 0.266 gm-2d-1 up to 66.238 gm-2d-1 with an average value of 23.350 gm-2d-1. The estimated average value for the total diffuse CO2 released for the Mt. Ontake volcanic complex during this study was 3,149 ± 98 td-1, with the main contributions arising from the NE zone of the complex. It is expected for future surveys to increase the density of sampling points and to sample the areas near the crater in order to obtain a better approximation of the diffuse CO2 efflux emission as well as obtain a long-term evolution to understand the dynamics of diffuse CO2 emission and its relationship with the volcanic activity of Mt. Ontake.

Kinetic bottlenecks to chemical exchange rates for deep-sea animals II: Carbon dioxide

NASA Astrophysics Data System (ADS)

Hofmann, A. F.; Peltzer, E. T.; Brewer, P. G.

2012-11-01

Increased ocean acidification from fossil fuel CO2 invasion, from temperature-driven changes in respiration, and from possible leakage from sub-seabed geologic CO2 disposal has aroused concern over the impacts of elevated CO2 concentrations on marine life. Discussion of these impacts has so far focused only on changes in the oceanic bulk fluid properties (ΔpH, Δ[∑CO2] etc.) as the critical variable and with a major focus on carbonate shell dissolution. Here we describe the rate problem for animals that must export CO2 at about the same rate at which O2 is consumed. We analyze the basic properties controlling CO2 export within the diffusive boundary layer around marine animals in an ocean changing in temperature (T) and CO2 concentration in order to compare the challenges posed by O2 uptake under stress with the equivalent problem of CO2 expulsion. The problem is more complex than that for a non-reactive gas since, as with gas exchange of CO2 at the air-sea interface, the influence of the ensemble of reactions within the CO2-HCO3--CO32- acid-base system needs to be considered. These reactions significantly facilitate CO2 efflux compared to O2 intake at equal temperature, pressure and flow rate under typical oceanic concentrations.The effect of these reactions can be described by an enhancement factor. For organisms, this means mechanically increasing flow over their surface to thin the boundary layer as is required to alleviate O2 stress seems not necessary to facilitate CO2 efflux. Nevertheless the elevated pCO2 cost most likely is non-zero. Regionally as with O2 the combination of T, P, and pH/pCO2 creates a zone of maximum CO2 stress at around 1000 m depth. But the net result is that, for the problem of gas exchange with the bulk ocean, the combination of an increasing T combined with declining O2 poses a greater challenge to marine life than does increasing CO2. The relationships developed here allow a more accurate prediction of the impacts on marine life from the combined effects of changing T, O2, and CO2 than can be estimated from single variable studies.

Horizon Partitioning of Soil CO2 Sources and their Isotopic Composition (13C) in a Pinus Sylvestris Stand

NASA Astrophysics Data System (ADS)

Goffin, S.; Parent, F.; Plain, C.; Maier, M.; Schack-Kirchner, H.; Aubinet, M.; Longdoz, B.

2012-12-01

The overall aim of this study is to contribute to a better understanding of mechanisms behind soil CO2 efflux using carbon stable isotopes. The approach combines a soil multilayer analysis and the isotopic tool in an in situ study. The specific goal of this work is to quantify the origin and the determinism of 13CO2 and 12CO2 production processes in the different soil layers using the gradient-efflux approach. To meet this, the work includes an experimental setup and a modeling approach. The experimental set up (see also communication of Parent et al., session B008) comprised a combination of different systems, which were installed in a Scot Pine temperate forest at the Hartheim site (Southwestern Germany). Measurements include (i) half hourly vertical profiles of soil CO2 concentration (using soil CO2 probes), soil water content and temperature; (ii) half hourly soil surface CO2 effluxes (automatic chambers); (iii) half hourly isotopic composition of surface CO2 efflux and soil CO2 concentration profile and (iv) estimation of soil diffusivity through laboratory measurements conducted on soil samples taken at several depths. Using the data collected in the experimental part, we developed and used a diffusive transport model to simulate CO2 (13CO2 and 12CO2) flows inside and out of the soil based on Fick's first law. Given the horizontal homogeneity of soil physical parameters in Hartheim, we treated the soil as a structure consisting of distinctive layers of 5 cm thick and expressed the Fick's first law in a discrete formalism. The diffusion coefficient used in each layer was derived from (i) horizon specific relationships, obtained from laboratory measurements, between soil relative diffusivity and its water content and (ii) the soil water content values measured in situ. The concentration profile was obtained from in situ measurements. So, the main model inputs are the profiles of (i) CO2 (13CO2 and 12CO2) concentration, (ii) soil diffusion coefficient and (iii) soil water content. Once the diffusive fluxes deduced at each layer interface, the CO2 (13CO2 and 12CO2) production profile was calculated using the (discretized) mass balance equation in each layer. The results of the Hartheim measurement campaign will be presented. The CO2 source vertical profile and its link with the root and the Carbon organic content distribution will be showed. The dynamic of CO2 sources and their isotopic signature will be linked to climatic variables such soil temperature and soil water content. For example, we will show that the dynamics of CO2 sources was mainly related to temperature while changing of isotopic signature was more correlated to soil moisture.

Diffuse Carbon Dioxide (CO2) degassing from the summit crater of Pico do Fogo during the 2014-15 eruption, Cape Verde

NASA Astrophysics Data System (ADS)

Rodríguez, Fatima; Dionis, Samara; Padrón, Eleazar; Fernandes, Paulo; Melián, Gladys V.; Pérez, Nemesio M.; Hernández, Pedro A.; Silva, Sónia; Pereira, José Manuel; Cardoso, Nadir; Asensio-Ramos, María; Barrancos, José; Padilla, Germán; Calvo, David; Semedo, Helio

2015-04-01

On January 3, 2015, a new diffuse CO2 degassing survey at the summit crater of Pico do Fogo volcano (2,829 m above sea level) was carried out by ITER/INVOLCAN/UNICV/OVCV research team to investigate the effect of the 2014-15 Fogo eruption on the diffuse degassing through the summit crater. Before the eruption onset on November 23, 2014, these type of surveys were periodically performed by ITER/INVOLCAN/UNICV/OVCV research team since May 2007. The first published data on diffuse CO2 degassing rate from the summit crater of Pico do Fogo volcano (219 ± 36 t d-1) is related to a survey performed on February 2010 (Dionis et al., 2015). Each survey implies about 65 CO2 efflux measurements to obtain a good spatial distribution and cover homogeneously the summit crater area (0.14 km2). Because of the sudden falls of rocks of different sizes inside the summit crater during the January 3 survey, the research team aborted continues working in the summit crater without completing the survey only 32 of the 65 CO2 efflux measurements were performed covering a smaller area (0.065 km2). Observed CO2 efflux values ranged from non detectable (< 1.5 g m-2 d-1) up to 12188 g m-2 d-1 and showed a mean value of 1090.2 g m-2 d-1. The observed CO2 efflux median values from the same sampling sites in previous surveys (83.1 g m-2 d-1 for March 2014; 15.5 g m-2 d-1 for October 2013; 2.3 g m-2 d-1 for April 2013; 14.6 g m-2 d-1 for February 2012; 64.7 g m-2 d-1 for March 2011; 64.5 for Febraury 2010 ) were lower than the median of the January 2015 survey (249.4 g m-2 d-1) suggesting a higher degassing rate for this new survey. The diffuse CO2 emission from the study area of 0.065 km2, within the summit crater, was 74 t d-1 on January 3, 2015, which is a similar degassing rate to those estimated for the same study area on the July 2014 (90 t d-1) and August 2014 (66 t d-1) surveys, and relatively higher than the estimated for October 2012 survey (27 t d-1). Since the diffuse CO2 emission rate on July and August 2014 were 323 and 337 t d-1, respectively, it can be expected a relatively high diffuse CO2 degassing rate from the summit crater of Pico do Fogo for the January 3, 2015 survey (> 300 t d-1). This most recent survey did not cover the hydrothermal alteration zone within the crater, where the highest CO2 efflux measurements are usually recorded. Dionis et al. (2015), Bull. Volcanol., in press;

Non-controlled biogenic emissions to the atmosphere from Lazareto landfill, Tenerife, Canary Islands.

PubMed

Nolasco, Dácil; Lima, R Noemí; Hernández, Pedro A; Pérez, Nemesio M

2008-01-01

[corrected] Historically, landfills have been the simplest form of eliminating urban solid waste with the minimum cost. They have been the most usual method for discarding solid waste. However, landfills are considered authentic biochemical reactors that introduce large amounts of contaminants into the environment in the form of gas and leachates. The dynamics of generation and the movement of gas in landfills depend on the input and output parameters, as well as on the structure of the landfill and the kind of waste. The input parameters include water introduced through natural or artificial processes, the characteristics of the urban solid waste, and the input of atmospheric air. The main output parameters for these biochemical reactors include the gases and the leachates that are potentially pollutants for the environment. Control systems are designed and installed to minimize the impact on the environment. However, these systems are not perfect and a significant amount of landfill gas could be released to the atmosphere through the surface in a diffuse form, also known as Non-controlled emission. In this paper, the results of the Non-controlled biogenic gas emissions from the Lazareto landfill in Tenerife, Canary Islands, are presented. The purpose of this study was to evaluate the concentration of CH4 and CO2 in the soil gas of the landfill cover, the CH4 and CO2 efflux from the surface of the landfill and, finally, to compare these parameters with other similar landfills. In this way, a better understanding of the process that controls biogenic gas emissions in landfills is expected. A Non-controlled biogenic gas emission survey of 281 sampling sites was carried out during February and March, 2002. The sampling sites were selected in order to obtain a well-distributed sampling grid. Surface landfill CO2 efflux measurements were carried out at each sampling site on the surface landfill together with soil gas collection and ground temperatures at a depth of 30-40 cm. The CH4 efflux was computed from CO2 efflux and from the ratio CH4/CO2 in the soil gas. Soil gas samples were collected at a depth of 30-40 cm using a metallic probe and 20 cc hypodermic syringes, and later stored in evacuated 10 cc vacutainers for laboratory analysis of bulk composition. The gas sample was introduced in a vacutainer filled with deionized water and displacing the water until the vacutainer was filled with the gas sample in order to avoid air contamination from entering. The surface landfill temperature of the landfill was measured at a depth of 40 cm using a digital thermometer type OMEGA 871A. Landfill gases, CO2 and CH4, were analyzed within 24 hours using a double channel VARIAN micro-GC QUAD CP-2002P, with a 10 meter PORAPLOT-Q column, a TCD detector, and He as a carrier gas. The analysis temperature was 40 degrees C and the injection time was 10 msec. Surface landfill CO2 efflux measurements were performed using a portable NDIR spectrophotometer Licor-800 according to the accumulation chamber method (Chiodini et al. 1996). The data treatment, aimed at drawing the flux map and computing the total gas output, was based on the application of stochastic simulation algorithms provided by the GSLIB program (Deutsch and Journel 1998). Diffuse CH4 and CO2 efflux values range from negligible values up to 7,148 and 30,573 g m(-2) d(-1), respectively. The spatial distribution of the concentration and efflux of CO2, CH4 and soil temperature, show three areas of maximum activity in the landfill, suggesting a non-uniform pattern of diffuse degassing. This correlation between high emissions and concentration of CO2, CH4 and soil temperatures suggests that the areas of higher microbial activity and exothermic reactions are releasing CO2 and CH4 to the atmosphere from the landfill. Taking into consideration the spatial distribution of the CO2 and CH4 efflux values as well as the extension of the landfill, the Non-controlled emission of CO2 and CH4 to the atmosphere by the Lazareto's landfill are of 167 +/- 13.3 and 16 +/- 2.5 t d(-1), respectively. The patterns of gas flow within the landfill seem to be affected by boundary materials at the sides. The basalt layers have a low permeability and the gas flow in these areas is extensive. In this area, where a basalt layer does not exist, the flow gas diffuses toward the sea and the flux emissions at the landfill surface are lower. This behavior reflects the possible dissolution of gases into water and the deflection of gases towards the surface at the basalt boundary. The proximity to the sea, the installation of a palm tree garden and, as a result, the contribution of water coming from the watering of this garden has reactivated the system. The introduction of sea water into the landfill and the type of boundary could be defining the superficial gas discharges. Results from this study indicate that the spatial distribution of Non-controlled emission of CO2 and CH4 at the Lazareto's landfill shows a non-uniform pattern of diffuse degassing. The northeast, central and northwest areas of the Lazareto's landfill are the three areas of high emissions and concentration of CO2 and CH4, and high temperatures. The correlation between high emissions and the concentration of CO2, CH4, and the high temperatures suggest that the areas of higher microbial activity and exothermic reactions are releasing more CO2 and CH4 to the atmosphere from the landfill. A high concentration of CO2 is probably due to the presence of methanotrophic bacteria in the soil atmosphere of the landfill. Patterns of gas flow within the landfill seem to be affected by boundary materials (basalt layers) of low permeability, and side boundaries of the flux emissions at the surface are higher. At the sides of seawater and sediment boundaries, flux emissions at the landfill surface are lower. This behavior reflects a possible dissolution of gases into the water and the deflection of gases towards the surface at the basalt boundary. With this study, we can compare the data obtained in this landfill with other landfills and observe the different levels of emission. The proximity to the sea and the installation of the palm tree garden palms and, as a result, the contribution of water coming from the watering of this garden has reactivated the system. Many landfills worldwide located in similar settings could experience similar gas production processes. The need for investigating and monitoring sea water and sediment quality in these landfills is advisable. Concentrations and fluxes of contaminants and their impact in the area should be assessed. With this study we can compare the data obtained in these landfills with other landfills and observe the different levels of emission.

Metalimnetic oxygen minima alter the vertical profiles of carbon dioxide and methane in a managed freshwater reservoir.

PubMed

McClure, Ryan P; Hamre, Kathleen D; Niederlehner, B R; Munger, Zackary W; Chen, Shengyang; Lofton, Mary E; Schreiber, Madeline E; Carey, Cayelan C

2018-04-30

Metalimnetic oxygen minimum zones (MOMs) commonly develop during the summer stratified period in freshwater reservoirs because of both natural processes and water quality management. While several previous studies have examined the causes of MOMs, much less is known about their effects, especially on reservoir biogeochemistry. MOMs create distinct redox gradients in the water column which may alter the magnitude and vertical distribution of dissolved methane (CH 4 ) and carbon dioxide (CO 2 ). The vertical distribution and diffusive efflux of CH 4 and CO 2 was monitored for two consecutive open-water seasons in a eutrophic reservoir that develops MOMs as a result of the operation of water quality engineering systems. During both summers, elevated concentrations of CH 4 accumulated within the anoxic MOM, reaching a maximum of 120 μM, and elevated concentrations of CO 2 accumulated in the oxic hypolimnion, reaching a maximum of 780 μM. Interestingly, the largest observed diffusive CH 4 effluxes occurred before fall turnover in both years, while peak diffusive CO 2 effluxes occurred both before and during turnover. Our data indicate that MOMs can substantially change the vertical distribution of CH 4 and CO 2 in the water column in reservoirs, resulting in the accumulation of CH 4 in the metalimnion (vs. at the sediments) and CO 2 in the hypolimnion. Copyright © 2018 Elsevier B.V. All rights reserved.

Interactive Effects of Climate Change and Decomposer Communities on the Stabilization of Wood-Derived Carbon Pools: Catalyst for a New Study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Resh, Sigrid C.

Globally, forest soils store ~two-thirds as much carbon (C) as the atmosphere. Although wood makes up the majority of forest biomass, the importance of wood contributions to soil C pools is unknown. Even with recent advances in the mechanistic understanding of soil processes, integrative studies tracing C input pathways and biological fluxes within and from soils are lacking. Therefore, our research objectives were to assess the impact of different fungal decay pathways (i.e., white-rot versus brown-rot)—in interaction with wood quality, soil temperature, wood location (i.e., soil surface and buried in mineral soil), and soil texture—on the transformation of woody materialmore » into soil CO 2 efflux, dissolved organic carbon (DOC), and soil C pools. The use of 13C-depleted woody biomass harvested from the Rhinelander, WI free-air carbon dioxide enrichment (Aspen-FACE) experiment affords the unique opportunity to distinguish the wood-derived C from other soil C fluxes and pools. We established 168 treatment plots across six field sites (three sand and three loam textured soil). Treatment plots consisted of full-factorial design with the following treatments: 1. Wood chips from elevated CO 2, elevated CO 2 + O 3, or ambient atmosphere AspenFACE treatments; 2. Inoculated with white rot (Bjerkandera adusta) or brown rot (Gloeophyllum sepiarium) pure fungal cultures, or the original suite of endemic microbial community on the logs; and 3. Buried (15cm in soil as a proxy for coarse roots) or surface applied wood chips. We also created a warming treatment using open-topped, passive warming chambers on a subset of the above treatments. Control plots with no added wood (“no chip control”) were incorporated into the research design. Soils were sampled for initial δ 13C values, CN concentrations, and bulk density. A subset of plots were instrumented with lysimeters for sampling soil water and temperature data loggers for measuring soil temperatures. To determine the early pathways of decomposition, we measured soil surface CO 2 efflux, dissolved organic C (DOC), and DO 13C approximately monthly over two growing seasons from a subsample of the research plots. To determine the portion of soil surface CO 2 efflux attributable to wood-derived C, we used Keeling plot techniques to estimate the associated δ 13C values of the soil CO 2 efflux. We measured the δ 13CO 2 once during the peak of each growing season. Initial values for soil δ 13C values and CN concentrations averaged across the six sites were -26.8‰ (standard error = 0.04), 2.46% (se = 0.11), and 0.15% (se = 0.01), respectively. The labeled wood chips from the Aspen FACE treatments had an average δ13C value of -39.5‰ (se 0.10). The >12 ‰ isotopic difference between the soil and wood chip δ 13C values provides the basis for tracking the wood-derived C through the early stages of decomposition and subsequent storage in the soil. Across our six research sites, average soil surface CO 2 efflux ranged from 1.04 to 2.00 g CO 2 m -2 h -1 for the first two growing seasons. No wood chip controls had an average soil surface CO 2 efflux of 0.67 g CO 2 m -2 h -1 or about half of that of the wood chip treatment plots. Wood-derived CO 2 efflux was higher for loam textured soils relative to sands (0.70 and 0.54 g CO 2 m -2 h -1, respectively; p = 0.045)), for surface relative to buried wood chip treatments (0.92 and 0.39 g CO 2 m -2 h -1, respectively; p < 0.001), for warmed relative to ambient temperature treatments (0.99 and 0.78 g CO 2 m -2 h -1, respectively; 0.004), and for natural rot relative to brown and white rots (0.93, 0.82, and 0.78 g CO 2 m -2 h -1, respectively; p = 0.068). Our first two growing seasons of soil surface CO 2 efflux data show that wood chip location (i.e., surface vs. buried chip application) is very important, with surface chips loosing twice the wood-derived CO 2. The DOC data support this trend for greater loss of ecosystem C from surface chips. This has strong implications for the importance of root and buried wood for ecosystem C retention. This strong chip location effect on wood-derived C loss was significantly modified by soil texture, soil temperature, decomposer communities, and wood quality as effected by potential future CO 2 and O 3 levels.« less

Disentangling controls on mineral-stabilized soil organic matter using a slurry incubation

NASA Astrophysics Data System (ADS)

Lavallee, J. M.; Cotrufo, M. F.; Paul, E. A.; Conant, R. T.

2014-12-01

Mineral-stabilized organic matter (OM) is the largest and oldest pool of soil carbon and nitrogen. Mineral stabilization limits OM availability to soil microbes, preventing its decomposition and prolonging its turnover. Thus, understanding controls on the decomposition of mineral-stabilized OM is key to understanding soil carbon and nitrogen dynamics. The very slow turnover of mineral-stabilized OM makes it challenging to study in a typical incubation, and as a result, many potential controls (temperature, OM chemistry, and mineralogy) on its turnover remain unclear. We aimed to better understand controls on decomposition of mineral-stabilized OM by employing a slurry incubation technique, which speeds up microbial processing of OM by maximizing OM accessibility to microbes. In a slurry incubation, we expect that any OM that is not stabilized on mineral surfaces will be available for decomposition and will be converted to CO2. Using this technique, we studied the interactive effects of incubation temperature, plant material type (aboveground vs. belowground), and soil fraction (silt vs. clay) on CO2 efflux and OM stabilization. We separated silt-sized and clay-sized fractions from an agricultural soil, added aboveground or belowground plant material to each, and incubated them at 15°C, 25°C and 35°C. The added plant material was isotopically labeled (13C and 15N), which allowed us to trace it through the system and distinguish between the responses of the new (derived from the plant material) and old (derived from what was already present in the silt and clay) OM to warming. We measured CO2 efflux and 13CO2 efflux throughout the incubation. We performed one short-term harvest at day 6 and one final harvest at day 60. Initial results show higher cumulative CO2 efflux at warmer temperatures regardless of plant material type or soil fraction. A larger fraction of that CO2 came from OM that was initially present in the silt and clay, rather than from the plant material that we added, which suggests faster turnover of that "old" OM at warmer temperatures. We will present CO2 efflux data in addition to total [C] and [N] and the isotopic ratios of 13C and 15N in the silt and clay at each harvest to explain how the interactions between warming, plant material type and soil fraction affect turnover of mineral stabilized OM.

Seasonal and Daily Dynamics of the CO2 Emission from Soils of Pinus koraiensis Forests in the South of the Sikhote-Alin Range

NASA Astrophysics Data System (ADS)

Ivanov, A. V.; Braun, M.; Tataurov, V. A.

2018-03-01

The presented study shows the results of measuring soil respiration in typical burozems (Dystric Cambisols) under mixed Korean pine-broadleaved forests in the southern part of the Primorskii (Far East) region of Russia growing under conditions of monsoon climate. The measurements were performed in 2014-2016 by the chamber method with the use of a portable infrared gas analyzer. Relative and total values of the CO2 efflux from the soil surface on four model plots were determined. The intensity of summer emission varied from 2.25 to 10.97 μmol/(m2 s), and the total CO2 efflux from the soils of four plots varied from 18.84 to 25.56 mol/m2. It is shown that a larger part of seasonal variability in the soil respiration is controlled by the soil temperature ( R 2 = 0.5-0.7); the soil water content also has a significant influence on the CO2 emission determining about 10% of its temporal variability. The daily dynamics of soil respiration under the old-age (200 yrs) forest have a significant relationship with the soil temperature ( R 2 = 0.51). The pyrogenic transformation of Pinus koraiensis forests into low-value oak forests is accompanied by an increase in the CO2 efflux from the soil.

Non-Controlled Biogenic Emission of CO, H2S, NH3 and Hg0 from Lazareto's Landfill, Tenerife, Canary Islands

NASA Astrophysics Data System (ADS)

Nolasco, D.; Lima, R.; Salazar, J.; Hernández, P. A.; Pérez, N. M.

2002-12-01

Landfills are important sources of contaminant gases to the surrounding environment and a significant amount of them could be released to the atmosphere through the surface environment in a diffuse form, also known as non-controlled emission of landfill gases. CH4 and CO2 are major components in landfill gases and other gas species are only present in minor amounts. Trace compounds include both inorganic and a large number of volatile organic components. The goal of this study is to evaluate the non-controlled biogenic emission of inorganic toxic gases from Lazareto's landfill. Which is located in the city of Santa Cruz de Tenerife, with a population of about 150,000, and is used as a Palm tree park. Lazareto's landfill has an extension of 0.22 Km2 and it is not operative since 1980. A non-controlled biogenic gas emission survey of 281 sampling sites was carried out from February tod March, 2002. Surface CO2 efflux measurements were performed by means of a portable NDIR sensor according with the accumulation chamber method. Surface CO2 efflux ranged from negligible values up to 30,600 gm-2d-1. At each sampling site, surface landfill gas samples were collected at 40 cm depth using a metallic soil probe. These gas samples were analyzed within 24 hours for major and inorganic toxic gas species by means of microGC and specific electrochemical sensors. The highest concentrations of CO, H2S, NH3 and Hg0 were 3, 20, 2,227, 0.010 ppmV, respectively. Non-controlled biogenic emission rate of CO, H2S, NH3, and Hg0 were estimated by multiplying the observed surface CO2 efflux times (Inorganic Toxic Gas)i/CO2 weight ratio at each sampling site, respectively. The highest surface inorganic toxic gas efllux rates were 699 gm-2d-1 for NH3, 81, 431 and 4 mgm-2d-1 for CO, H2S and Hg0, respectively. Taking into consideration the spatial distribution of the inorganic toxic gas efflux values as well as the extension of the landfill, the non-controlled biogenic emission of CO, H2S, NH3 and Hg0 to the atmosphere by Lazareto's landfill are 0.1, 0.9, 0.7, and 0.7 Kgd-1, respectively.

Estimating greenhouse gas emissions at the soil-atmosphere interface in forested watersheds of the US Northeast.

PubMed

Gomez, Joshua; Vidon, Philippe; Gross, Jordan; Beier, Colin; Caputo, Jesse; Mitchell, Myron

2016-05-01

Although anthropogenic emissions of greenhouse gases (GHG: CO2, CH4, N2O) are unequivocally tied to climate change, natural systems such as forests have the potential to affect GHG concentration in the atmosphere. Our study reports GHG emissions as CO2, CH4, N2O, and CO2eq fluxes across a range of landscape hydrogeomorphic classes (wetlands, riparian areas, lower hillslopes, upper hillslopes) in a forested watershed of the Northeastern USA and assesses the usability of the topographic wetness index (TWI) as a tool to identify distinct landscape geomorphic classes to aid in the development of GHG budgets at the soil atmosphere interface at the watershed scale. Wetlands were hot spots of GHG production (in CO2eq) in the landscape owing to large CH4 emission. However, on an areal basis, the lower hillslope class had the greatest influence on the net watershed CO2eq efflux, mainly because it encompassed the largest proportion of the study watershed (54 %) and had high CO2 fluxes relative to other land classes. On an annual basis, summer, fall, winter, and spring accounted for 40, 27, 9, and 24 % of total CO2eq emissions, respectively. When compared to other approaches (e.g., random or systematic sampling design), the TWI landscape classification method was successful in identifying dominant landscape hydrogeomorphic classes and offered the possibility of systematically accounting for small areas of the watershed (e.g., wetlands) that have a disproportionate effect on total GHG emissions. Overall, results indicate that soil CO2eq efflux in the Archer Creek Watershed may exceed C uptake by live trees under current conditions.

Izu-Oshima volcano, Japan: ten years of geochemical monitoring by means of CO2 soil diffuse degassing

NASA Astrophysics Data System (ADS)

Hernandez Perez, P. A.; Mori, T.; Notsu, K.; Morita, M.; Padron, E.; Onizawa, S.; Melián, G.; Sumino, H.; Asensio-Ramos, M.; Nogami, K.; Yamane, K.; Perez, N. M.

2016-12-01

Izu-Oshima is an active volcanic island located around 100 km SSW of Tokyo. The centre of the island is occupied by a caldera complex with a diameter of 3 km. A large post-caldera cone known as Mt. Mihara is located at the south-western quadrant of the caldera. Izu-Oshima has erupted 74 times, consisting mainly in fissure eruptions, both inside and outside of the caldera. The last eruption of Izu-Oshima occurred in 1986. Since 2007, eight soil gas surveys have been carried out to investigate the spatial and temporal evolution of diffuse CO2 emission from this volcanic system and to identify those structures controlling the degassing process. Diffuse CO2 emission surveys were always carried out following the accumulation chamber method. Spatial distribution maps were constructed following the sequential Gaussian simulation (sGs) procedure. The location of the CO2 anomalies has always shown a close relationship with the structural characteristics of Miharayama, with most of the gas discharged from the rim of the summit crater. Temporal evolution of diffuse CO2 emission rate from Mt. Miharayama has shown a good temporal correlation with the main two peaks of seismic activity occur when highest CO diffuse emissions were computed, March 2007, August 2010 and July 2011, may be associated with fluid pressure fluctuations in the volcanic system due stress changes at depth. In order to strength the contribution of deep seated gases, we performed carbon isotopic analysis of soil gas samples at selected sites during 2010, 2013, 2015 and 2016 surveys. At isotopic compositions lighter than - 6‰, the soil CO2 effluxes were always low, while at heavier isotopic compositions an increasing number of points are characterized by relatively high soil CO efflux. Soil CO2 efflux peak values (xB) showed also a good correlation with the observed seismicity, with the largest value computed on June 2013. This parameter is a geochemical expression of the magnitude of the anomalous degassing, and the observed change in the trend may indicate an increase of the seismic-volcanic activity in the next future. Therefore, performing regularly soil CO2 efflux surveys seems to be an effective geochemical surveillance tool Izu-Oshima volcano in order to detect a change in the tendency of the CO2 emission rate in case of future episodes of volcanic unrest.

Genes for all metals--a bacterial view of the periodic table. The 1996 Thom Award Lecture.

PubMed

Silver, S

1998-01-01

Bacterial chromosomes have genes for transport proteins for inorganic nutrient cations and oxyanions, such as NH4+, K+, Mg2+, Co2+, Fe3+, Mn2+, Zn2+ and other trace cations, and PO4(3-), SO4(2-) and less abundant oxyanions. Together these account for perhaps a few hundred genes in many bacteria. Bacterial plasmids encode resistance systems for toxic metal and metalloid ions including Ag+, AsO2-, AsO4(3-), Cd2+, Co2+, CrO4(2-), Cu2+, Hg2+, Ni2+, Pb2+, TeO3(2-), Tl+ and Zn2+. Most resistance systems function by energy-dependent efflux of toxic ions. A few involve enzymatic (mostly redox) transformations. Some of the efflux resistance systems are ATPases and others are chemiosmotic ion/proton exchangers. The Cd(2+)-resistance cation pump of Gram-positive bacteria is membrane P-type ATPase, which has been labeled with 32P from [gamma-32P]ATP and drives ATP-dependent Cd2+ (and Zn2+) transport by membrane vesicles. The genes defective in the human hereditary diseases of copper metabolism, Menkes syndrome and Wilson's disease, encode P-type ATPases that are similar to bacterial cadmium ATPases. The arsenic resistance system transports arsenite [As(III)], alternatively with the ArsB polypeptide functioning as a chemiosmotic efflux transporter or with two polypeptides, ArsB and ArsA, functioning as an ATPase. The third protein of the arsenic resistance system is an enzyme that reduces intracellular arsenate [As(V)] to arsenite [As(III)], the substrate of the efflux system. In Gram-negative cells, a three polypeptide complex functions as a chemiosmotic cation/protein exchanger to efflux Cd2+, Zn2+ and Co2+. This pump consists of an inner membrane (CzcA), an outer membrane (CzcC) and a membrane-spanning (CzcB) protein that function together.

Puhimau thermal area: a window into the upper east rift zone of Kilauea Volcano, Hawaii?

USGS Publications Warehouse

McGee, K.A.; Sutton, A.J.; Elias, T.; Doukas, M.P.; Gerlach, T.M.

2006-01-01

We report the results of two soil CO2 efflux surveys by the closed chamber circulation method at the Puhimau thermal area in the upper East Rift Zone (ERZ) of Kilauea volcano, Hawaii. The surveys were undertaken in 1996 and 1998 to constrain how much CO2 might be reaching the ERZ after degassing beneath the summit caldera and whether the Puhimau thermal area might be a significant contributor to the overall CO2 budget of Kilauea. The area was revisited in 2001 to determine the effects of surface disturbance on efflux values by the collar emplacement technique utilized in the earlier surveys. Utilizing a cutoff value of 50 g m−2 d−1 for the surrounding forest background efflux, the CO2 emission rates for the anomaly at Puhimau thermal area were 27 t d−1 in 1996 and 17 t d−1 in 1998. Water vapor was removed before analysis in all cases in order to obtain CO2 values on a dry air basis and mitigate the effect of water vapor dilution on the measurements. It is clear that Puhimau thermal area is not a significant contributor to Kilauea's CO2 output and that most of Kilauea's CO2 (8500 t d−1) is degassed at the summit, leaving only magma with its remaining stored volatiles, such as SO2, for injection down the ERZ. Because of the low CO2 emission rate and the presence of a shallow water table in the upper ERZ that effectively scrubs SO2 and other acid gases, Puhimau thermal area currently does not appear to be generally well suited for observing temporal changes in degassing at Kilauea.

Experimental warming of a mountain tundra increases soil CO2 effluxes and enhances CH4 and N2O uptake at Changbai Mountain, China

PubMed Central

Zhou, Yumei; Hagedorn, Frank; Zhou, Chunliang; Jiang, Xiaojie; Wang, Xiuxiu; Li, Mai-He

2016-01-01

Climatic warming is expected to particularly alter greenhouse gas (GHG) emissions from soils in cold ecosystems such as tundra. We used 1 m2 open-top chambers (OTCs) during three growing seasons to examine how warming (+0.8–1.2 °C) affects the fluxes of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) from alpine tundra soils. Results showed that OTC warming increased soil CO2 efflux by 141% in the first growing season and by 45% in the second and third growing season. The mean CH4 flux of the three growing seasons was −27.6 and −16.7 μg CH4-C m−2h−1 in the warmed and control treatment, respectively. Fluxes of N2O switched between net uptake and emission. Warming didn’t significantly affect N2O emission during the first and the second growing season, but stimulated N2O uptake in the third growing season. The global warming potential of GHG was clearly dominated by soil CO2 effluxes (>99%) and was increased by the OTC warming. In conclusion, soil temperature is the main controlling factor for soil respiration in this tundra. Climate warming will lead to higher soil CO2 emissions but also to an enhanced CH4 uptake with an overall increase of the global warming potential for tundra. PMID:26880107

Coenzyme Q(1) as a probe for mitochondrial complex I activity in the intact perfused hyperoxia-exposed wild-type and Nqo1-null mouse lung.

PubMed

Bongard, Robert D; Myers, Charles R; Lindemer, Brian J; Baumgardt, Shelley; Gonzalez, Frank J; Merker, Marilyn P

2012-05-01

Previous studies showed that coenzyme Q(1) (CoQ(1)) reduction on passage through the rat pulmonary circulation was catalyzed by NAD(P)H:quinone oxidoreductase 1 (NQO1) and mitochondrial complex I, but that NQO1 genotype was not a factor in CoQ(1) reduction on passage through the mouse lung. The aim of the present study was to evaluate the complex I contribution to CoQ(1) reduction in the isolated perfused wild-type (NQO1(+/+)) and Nqo1-null (NQO1(-)/(-)) mouse lung. CoQ(1) reduction was measured as the steady-state pulmonary venous CoQ(1) hydroquinone (CoQ(1)H(2)) efflux rate during infusion of CoQ(1) into the pulmonary arterial inflow. CoQ(1)H(2) efflux rates during infusion of 50 μM CoQ(1) were not significantly different for NQO1(+/+) and NQO1(-/-) lungs (0.80 ± 0.03 and 0.68 ± 0.07 μmol·min(-1)·g lung dry wt(-1), respectively, P > 0.05). The mitochondrial complex I inhibitor rotenone depressed CoQ(1)H(2) efflux rates for both genotypes (0.19 ± 0.08 and 0.08 ± 0.04 μmol·min(-1)·g lung dry wt(-1) for NQO1(+/+) and NQO1(-/-), respectively, P < 0.05). Exposure of mice to 100% O(2) for 48 h also depressed CoQ(1)H(2) efflux rates in NQO1(+/+) and NQO1(-/-) lungs (0.43 ± 0.03 and 0.11 ± 0.04 μmol·min(-1)·g lung dry wt(-1), respectively, P < 0.05 by ANOVA). The impact of rotenone or hyperoxia on CoQ(1) redox metabolism could not be attributed to effects on lung wet-to-dry weight ratios, perfusion pressures, perfused surface areas, or total venous effluent CoQ(1) recoveries, the latter measured by spectrophotometry or mass spectrometry. Complex I activity in mitochondria-enriched lung fractions was depressed in hyperoxia-exposed lungs for both genotypes. This study provides new evidence for the potential utility of CoQ(1) as a nondestructive indicator of the impact of pharmacological or pathological exposures on complex I activity in the intact perfused mouse lung.

Forest floor and mineral soil respiration rates in a northern Minnesota red pine chronosequence

Treesearch

Matthew Powers; Randall Kolka; John Bradford; Brian Palik; Martin Jurgensen

2017-01-01

We measured total soil CO2 efflux (RS) and efflux from the forest floor layers (RFF) in red pine (Pinus resinosa Ait.) stands of different ages to examine relationships between stand age and belowground C cycling. Soil temperature and RS were often lower in...

Role of P-glycoprotein and permeability upon the brain distribution and pharmacodynamics of etamicastat: a comparison with nepicastat.

PubMed

Loureiro, Ana I; Bonifácio, Maria João; Fernandes-Lopes, Carlos; Pires, Nuno; Igreja, Bruno; Wright, Lyndon C; Soares-da-Silva, Patrício

2015-01-01

1. This study explores the impact of permeability and P-glycoprotein (P-gp) efflux, upon brain exposure to etamicastat, a new dopamine-β-hydroxylase (DBH) inhibitor and consequently brain levels of catecholamines. 2. Brain exposure to etamicastat (10 mg/kg), following intravenous administration to mice, was residual and upon oral administration of the same dose no compound was detected, concurring with the absence of effects upon brain catecholamines. The intravenous co-administration of elacridar (1.0 mg/kg), a known P-gp/BCRP dual modulator, significantly increased brain etamicastat exposure, but the levels attained were very low when compared to those of nepicastat, a centrally active DBH inhibitor. 3. In vitro permeability studies from apical-to-basal direction conducted in Caco-2 cells and MDCK-II cells showed that etamicastat apparent permeability was 1.2 × 10(-5) and 1.1 × 10(-6 )cm/s, respectively, 5- and 50-fold lower as compared to nepicastat. The secretory efflux ratio in MDCK-II cells overexpressing human P-gp showed an efflux ratio greater than 2, for both compounds, which was significantly decreased by elacridar. Despite its lower bioavailability and higher clearance, as compared to nepicastat, etamicastat showed preferential distribution to peripheral tissues and high plasma free fraction (15.5%), which may explain its effects upon peripheral DBH and catecholamine levels. 4. Though P-gp-mediated efflux may contribute to the limited brain penetration of etamicastat, the low permeability along with the pharmacokinetic properties of etamicastat may be perceived as the main contributors for its peripheral selectivity, which is advantageous for a cardiovascular drug candidate.

Effects of complex carbon addition to soil CO2 efflux and isotopic composition to soils near dead and live piñon pine trees

NASA Astrophysics Data System (ADS)

Powers, H.; McDowell, N.; Breecker, D. O.

2010-12-01

We test the hypothesis that soils collected near dead and living pinus edulous (piñon pine) trees should show a difference in their capacities to decompose complex carbon compounds. Since soils near dead trees have a large amount of cellulose and other complex carbon, the soil microbial community should be selected to metabolize cellulose. We collected soils from both live and dead piñon trees, added cellulose to half of the replicates, and placed them in microcosms for incubation. The microcosms were periodically sampled by a trace gas analyzer (TGA100, Campbell Scientific, USA) for CO2 concentration and δ13C and δ18O analysis. We found that CO2 evolution rates from live soils were significantly higher than rates from dead soils (1.1 and 0.6 ug CO2 g-1 soil s-1 respectively); soils with added cellulose displayed higher rates (1.1 and 0.8 and ug CO2 g-1 soil s-1). We did not see any significant differences in δ13C values between treatments, but there was a difference in δ18O between soils treated with cellulose and soils with no cellulose. Soils from both dead and live trees showed an increase in CO2 efflux when cellulose was added; however there was no distinguishable difference in efflux rate between live and dead soils in the cellulose added treatments.

Soil CO2 Efflux and Its Components Responded Differently to Throughfall Exclusion and Fertilization in a Loblolly Pine (Pinus taeda) Plantation

NASA Astrophysics Data System (ADS)

Yang, J.; Luedtke, C.; Akers, K.; McGuire, M.; Aubrey, D. P.; Teskey, R. O.

2014-12-01

Soil CO2 efflux (RS) is an important component of forest ecosystem carbon budgets and net ecosystem CO2 exchange, but little is known about how RS and its components respond to decreasing soil moisture and changes in soil fertility. The experiment design was a 2 X 2 factorial combination of fertilization (2 levels) and precipitation (throughfall exclusion, 2 levels) replicated in four blocks. We measured RS along with soil temperature (Ts) and soil moisture (WS) from 2012 to 2014 in a loblolly pine plantation in Washington, GA. The autotrophic (RA) and heterotrophic (RH) components of soil CO2 efflux were separated using trenched plots. Our objectives were to (1) quantify impacts of throughfall exclusion and fertilization on RS and its components (RA, RH).and (2) determine soil CO2efflux and its components individually response to environmental factors and biological factors in throughfall exclusion and fertilization treatments. Annual mean RS was 2.11, 1.73, 2.09 and 1.92 for treatments of control, fertilization, throughfall exclusion and combination of fertilization and throughfall exclusion, respectively, from 2012 to 2013. The apparent Q10 for RS was 2.26, 2.25, 2.12 and 2.35 in the four treatments, respectively. There were no significant differences in RS among treatments except between the Ws treatments. However, there was slight reduction in RS and RA in fertilization and the fertilization plus throughfall exclusion treatment. In all treaments, Ts explained more than 80% of variation in RS. The contribution of CO2-derived from ectomycorrhizal hyphae was less than 15%. RS and RH was better predicted by TS in the dormant season than the growing season, indicating that additional factors such as root growth and photosynthesis became more important contributors to RS during the growing season. Fertilization slightly decreased RS mainly from a decrease in RH. Throughfall exclusion increased the contribution of RA to RS. We concluded that soil moisture had more effect on RS and its components than changes in fertility.

Diffuse CO2 degassing monitoring of Cerro Negro volcano, Nicaragua

NASA Astrophysics Data System (ADS)

Hernández, Pedro A.; Alonso, Mar; Ibarra, Martha; Rodríguez, Wesly; Melián, Gladys V.; Saballos, Armando; Barrancos, José; Pérez, Nemesio M.; Álvarez, Julio; Martínez, William

2017-04-01

We report the results of fourteen soil CO2 efflux surveys by the closed accumulation chamber method at Cerro Negro volcano, Nicaragua. The surveys were undertaken from 1999 to 2016 to constrain the diffuse CO2 emission from this volcano and to evaluate the spatial and temporal variations of CO2 degassing rate in relation to the eruptive cycle. Cerro Negro is an active basaltic volcano belonging to the active Central American Volcanic Arc which includes a 1,100 Km long chain of 41 active volcanoes from Guatemala to Panama. Cerro Negro first erupted in 1850 and has experienced 21 eruptive eruptions with inter eruptive average periods between 7 and 9 years. Since the last eruption occurred on 5 August 1999, with erupted lava flows and ash clouds together with gas emissions, a collaborative research program between INETER and ITER/INVOLCAN has been established for monitoring diffuse CO2 emissions from this volcano. The first survey carried out at Cerro Negro was in December 1999, just 3 months after the 1999 eruption, with a total diffuse CO2 emission output estimated on 1,869 ± 197 td-1. The second survey carried out in March 2003, three years after the eruption, yielded a value of 432 ± 54 td-1. Both values that can be considered within the post-eruptive phase. The last survey performed at Cerro Negro was in November 2016, with an estimated diffuse CO2 emission of 63 ± 14 tṡd-1and soil CO2 efflux values ranging from non-detectable (˜0.5 g m-2 d-1) up to 7264 g m-2 d-1. The long-term record of diffuse CO2 emissions at Cerro Negro shows small temporal variations in CO2 emissions with a peak in 2004 (256 ± 26 td-1) followed by a peak in seismicity. Except this value, the rest of estimated values can be considered within the inter-eruptive phase, period during which a decreasing trend on the total diffuse CO2 output has been observed, with estimates between 10 and 83 tṡd-1. Regarding to the spatial distribution of diffuse CO2 values, most of relatively high CO2 efflux values were measured along the 1995 and 1999 craters together with higher soil H2S efflux and soil temperatures, and always close to the fumarolic areas, suggesting a structural control of the degassing process. The observed relationship between the long-term record of diffuse CO2 emissions and volcanic-seismic activity indicates that monitoring CO2 emission is an important geochemical tool for the volcanic surveillance at Cerro Negro.

Influence of Anthropogenic Nutrient Additions on Greenhouse Gas Production Rates at Water-soil Interfaces in an Urban Dominated Estuary

NASA Astrophysics Data System (ADS)

Brigham, B. A.; O'Mullan, G. D.; Bird, J. A.

2014-12-01

The tidal Hudson River Estuary (HRE) receives significant inputs of readily dissolvable carbon (C) and nitrogen (N) from incomplete wastewater treatment and sewer overflow during storm events associated with NYC and other urban centers. Nutrient deposition may alter C utilization in the estuarine water column, associated sediments and surrounding wetlands. In these anaerobic systems, we hypothesize that microbial activity is limited by the availability of easily-degradable C (not electron acceptors), which acts as a co-metabolite and provides energy for organic matter decomposition. Sporadic transport of highly C enriched storm derived runoff may substantially enhance greenhouse gas (GHG) production rates through the utilization of stored C pools. To test our hypothesis carbon dioxide (CO2) and methane (CH4) process rates (1) were evaluated from soil cores removed from three distinct HRE wetland sites (Saw Mill Creek, Piermont, and Iona Island Marsh(s)) across a salinity gradient and incubated under varying nutrient treatments. Further, CO2 and CH4 surface water effluxes (2) were quantified from multiple river cruises spanning two years at varying distance from nutrient sources associated with NYC. Incubation experiments from wetland soil core experiments demonstrated that readily degradable C but not inorganic N additions stimulated GHG production (200 - 350 ug C g-1 of dry soil day-1) threefold compared to negative controls. The HRE was found to be both a CO2 and CH4 source under all conditions. The greatest GHG efflux (300 - 3000 nmoles C m-2 day-1) was quantified in mid-channel, tributary, and near shore sites in close proximity to NYC which following precipitation events demonstrated 2-20X increased GHG efflux. These results demonstrate that anthropogenic C additions associated with dense urban centers have the potential to enhance anaerobic microbial degradation of organic matter and subsequent GHG production.

Diffuse Emission of Carbon Dioxide From Irazú Volcano, Costa Rica, Central America

NASA Astrophysics Data System (ADS)

Galindo, I.; Melian, G.; Ramirez, C.; Salazar, J.; Hernandez, P.; Perez, N.; Fernandez, M.; Notsu, K.

2001-12-01

Irazú (3,432 m) is a stratovolcano situated 50 Km east of San José, the capital of Costa Rica. Major geomorphological features at Irazú are five craters (Main Crater, Diego de La Haya, Playa Hermosa, La Laguna and El Piroclástico), and at least 10 satellitic cones which are located on its southern flank. Its eruptive history is known from 1723. Since then, have ocurred at least 23 eruptions. All known Holocene eruptions have been explosive. The focus of eruptions at the summit crater complex has migrated to the west towards the historically active crater from 1963 to 1965. Diffuse degassing studies are becoming an additional geochemical tool for volcanic surveillance. The purpose of this study is to evaluate the spatial distribution of diffuse CO2 emission as well as CO2 efflux from Irazú volcano. A soil CO2 flux survey of 201 sampling sites was carried out at the summit of Irazú volcano in March 2001. Sampling site distribution covered an area of 3.5 Km2. Soil CO2 efflux measurements were performed by means of a portable NDIR sensor LICOR-800. Soil CO2 efflux values ranged from non-detectable values to 316.1 gm-2d-1 Statistical-graphical analysis of the data showed three overlapping geochemical populations. The background mean is 3 gm-2d-1 and represents 91.3 % of the total data. Peak group showed a mean of 18 gm-2d-1 and represented 1.2 % of the data. Anomalous CO2 flux values are mainly detected in the South sector of the main crater, where landslides have previously occurred. Diffuse CO2 degassing rate of the study area yields 44.2 td-1.

Lessons Learned From Recent Research on Internal CO2 Transport in Trees. Part I, CO2 Efflux and Respiration

NASA Astrophysics Data System (ADS)

McGuire, M. A.; Bloemen, J.; Aubrey, D. P.; Steppe, K.; Teskey, R. O.

2016-12-01

Currently, the most pressing problem regarding respiration in trees is determining the rate of respiration in woody tissues. In stems and roots, barriers to diffusion promote the buildup of CO2 from respiration to high concentrations, often in the range of 3 to 10% and sometimes exceeding 20%, substantially higher than that of the atmosphere ( 0.04%). A substantial portion of this internal CO2 released from respiring cells in roots and stems can dissolve in xylem sap and move upward in the xylem stream, resulting in internal transport of respired CO2 that rivals the efflux of respired CO2from woody tissues. The importance of such internal CO2 transport for the assessment of above- and below-ground respiration has gained increasing interest and here we will synthesize the latest research. The most important recent finding has been that in tree roots, a large fraction of respired CO2 remains within the root system rather than diffusing into the soil. This CO2 is transported in xylem sap into the shoot, and because respiration is almost always measured as the flux of CO2 into the atmosphere from plant tissues, it represents an unaccounted- for component of tree root metabolism. In Populus deltoides trees, for which xylem CO2 transport and soil CO2 efflux near the tree was measured, twice the amount of CO2 derived from below-ground autotrophic respiration entered the xylem stream as diffused into the soil environment. For both Eucalyptus and Quercus, up to 24 and 19% of root-respired CO2 was transported via the transpiration stream, respectively, illustrating that a significant internal transport of root-respired CO2 is present across a wide range of plant families. These findings suggest that root and soil respiration can be substantially underestimated by "soil-centric" measurements. Moreover, internal transport of respired CO2, which has only recently been recognized and measured, has important implications for our understanding of carbon dynamics at both plant and ecosystem levels.

Effects of atmospheric CO2 enrichment on soil CO2 efflux in a young longleaf pine system

Treesearch

G. Brett Runion; John R. Butnor; S. A. Prior; R. J. Mitchell; H. H. Rogers

2012-01-01

The southeastern landscape is composed of agricultural and forest systems that can store carbon (C) in standing biomass and soil. Research is needed to quantify the effects of elevated atmospheric carbon dioxide (CO2) on terrestrial C dynamics including CO2 release back to the atmosphere and soil sequestration. Longleaf...

Anomalous Diffuse CO2 Emission Changes at San Vicente Volcano Related to Earthquakes in El Salvador, Central America

NASA Astrophysics Data System (ADS)

Salazar, J.; Hernandez, P.; Perez, N.; Barahona, F.; Olmos, R.; Cartagena, R.; Soriano, T.; Notsu, K.; Lopez, D.

2001-12-01

San Vicente or Chichontepeque (2,180 m a.s.l.) is a composite andesitic volcano located 50 Km east of San Salvador. Its paired edifice rises from the so-called Central Graben, an extensional structure parallel to the Pacific coast, and has been inactive for the last 3000 yrs. Fumaroles (98.2°C ) and hot spring waters are present along radial faults at two localities on the northern slope of the volcano (Aguas Agrias and El Infiernillo). CO2 is the most abundant component in the dry gas (>90%) and its mean isotopic composition (δ 13C(CO2)=-2.11 ‰ and 3He/4He of 6.9 Ra) suggests a magmatic origin for the CO2. These manifestations are supposed to be linked to a 1,200 m depth 250°C reservoir with a CO2 partial pressure of 14 bar extended beneath the volcano (Aiuppa et al., 1997). In February 13, 2001, a 6.6 magnitude earthquake with epicenter about 20 Km W of San Vicente damaged and destroyed many towns and villages in the north area of the volcano causing some deceases. In addition, two seismic swarms were recorded beneath the northeastern flank of the volcano in April and May 2001. Searching for any link between the actual seismic activity and changes in the diffuse CO2 degassing at San Vicente, an NDIR instrument for continuos monitoring of the diffuse CO2 degassing was set up at Aguas Agrias in March 2001. Soil CO2 efflux and several meteorological and soil physical variables were measured in an hourly basis. Very significative pre-seismic and post-seismic relationships have been found in the observed diffuse CO2 efflux temporal variations related to the May 2001 seismic swarms. A sustained 50% increase on the average diffuse CO2 efflux was observed 8 days before the May 8, 5.1 magnitude earthquake. This pre-seismic behaviour may be considered a precursor of the May 2001 seismic swarm at San Vicente volcano. However, about a three-fold increase in the diffuse CO2 efflux was also observed after the intense seismicity recorded on May 8-9. These preliminary results suggest that changes in the fluid pore-pressure within faults/fractures associated to the volcanic roots may be triggering, enhancing and responding (aperture and closure of fractures) to the local seismicity in the area of San Vicente volcano.

Drought effects on soil carbon dioxide production in two ecosystems in Central Sulawesi, Indonesia

NASA Astrophysics Data System (ADS)

van Straaten, Oliver

2010-05-01

Drought response on soil CO2 production dynamics were examined in two tropical ecosystems in central Sulawesi, Indonesia. Large-scale throughfall displacement roofs were built in a cacao (Theobroma cacao) / Gliricidia sepium agroforestry plantation (560 m.a.s.l.) and in a sub-montane tropical rainforest (1050 m.a.s.l.) to simulate drought conditions. At each site, ecosystem drought responses from three roof plots were compared to three undisturbed control plots. Soil CO2 production was measured spatially at the soil surface and vertically within the soil profile to 2.5 m depth every two weeks. 1. The cacao / Gliricidia ecosystem exhibited a mild drought response. Here, soil CO2 production decreased by 13% in comparison to the control plots during the 13 month induced drought. The mild drought response is attributed to two reasons. First, soil CO2 efflux exhibited an inverse parabolic relationship with soil moisture (R2 = 0.32): soil CO2 efflux peaked at intermediate moisture conditions, but was low when soil conditions became dry (in the induced drought plots), and when the soil became water saturated (in the control plots). This means that respiration differences between control and roof plots may have been masked when soil moisture conditions were saturated in the control and concurrently dry in roof plots. Secondly, the shallow rooted cacao understory grown next to the deeper rooted Gliricidia overstory created a favourable set of site conditions that enabled the ecosystem to mitigate serious drought stress. The experiment had a CO2 neutral effect overall: emissions were initially reduced during the induced drought period but rebounded and surpassed the control during the five month rewetting phase, thus compensating for earlier declines. 2. In contrast, the sub-montane tropical rainforest experienced a severe decrease in soil CO2 production. Here, soil CO2 efflux decreased by an average of 39% in comparison to the control during the 24 month induced drought period. Soil moisture, the main variable controlling CO2, exhibited a strong positive linear relationship with soil CO2 production (R2 = 0.72). A two phase ecosystem drought response was observed. During the first phase, which lasted nine months, leaf litter respiration declined while the total respiration from autotrophic and belowground heterotrophic sources remained relatively unchanged, although an upward shift from the subsoil to the soil surface was measured. During the second phase of the experiment, when drought conditions intensified further (the next 16 months), belowground CO2 production from heterotrophic and autotrophic sources decreased at all soil depths. Leaf litter respiration remained negligible. Recuperation after the drought was slow in this ecosystem and did not rebound to control plot levels. In this ecosystem, the simulated drought resulted in a reduction in overall CO2 emission.

Contrasting diel hysteresis between soil autotrophic and heterotrophic respiration in a desert ecosystem under different rainfall scenarios

PubMed Central

Song, Weimin; Chen, Shiping; Zhou, Yadan; Wu, Bo; Zhu, Yajuan; Lu, Qi; Lin, Guanghui

2015-01-01

Diel hysteresis occurs often between soil CO2 efflux (RS) and temperature, yet, little is known if diel hysteresis occurs in the two components of RS, i.e., autotrophic respiration (RA) and heterotrophic respiration (RH), and how diel hysteresis will respond to future rainfall change. We conducted a field experiment in a desert ecosystem in northern China simulating five different scenarios of future rain regimes. Diel variations of soil CO2 efflux and soil temperature were measured on Day 6 and Day 16 following the rain addition treatments each month during the growing season. We found contrasting responses in the diel hysteresis of RA and RH to soil temperature, with a clockwise hysteresis loop for RH but a counter-clockwise hysteresis loop for RA. Rain addition significantly increased the magnitude of diel hysteresis for both RH and RA on Day 6, but had no influence on either on Day 16 when soil moisture was much lower. These findings underline the different roles of biological (i.e. plant and microbial activities) and physical-chemical (e.g. heat transport and inorganic CO2 exchange) processes in regulating the diel hysteresis of RA and RH, which should be considered when estimating soil CO2 efflux in desert regions under future rainfall regime. PMID:26615895

Test of the mechanism of UV-induced K/sup +/ efflux

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murphy, T.M.; Huerta, A.J.

1987-04-01

UV radiation and certain plant pathogens stimulate a net efflux of K/sup +/ from cultured plant cells. Many aspects of the efflux are uncertain, including the counterion(s) involved. In the case of UV irradiation of rose cells, Murphy and Wilson suggest a coordinate loss of K/sup +/ and HCO/sub 3//sup -/; in contrast, Atkinson et al. suggest that treatment of tobacco cells with Erwinia pectate lyase introduces a counterflux of K/sup +/ and H/sup +/. In respiring cells, the cytoplasm and medium are buffered by respiratory CO/sub 2/, and it is difficult to distinguish between the two mechanisms. Still, themore » two models predict different influences of external pH on the rate of K/sup +/ flux. The authors have found that increasing pH from 4 to 8 by use of MES-TRIS buffer, pH state, or controlled external CO/sub 2/ concentration does not significantly decrease the rate of UV-induced K/sup +/ efflux. This evidence does not support the application of the K/sup +//H/sup +/ counterflux model to the case of the UV-irradiated rose cells.« less

Monitoring diffuse degassing in monogenetic volcanic field during seismic-volcanic unrest: the case of Tenerife North-West Rift Zone (NWRZ), Canary Islands, Spain

NASA Astrophysics Data System (ADS)

García, E.; Botelho, A. H.; Regnier, G. S. G.; Rodríguez, F.; Alonso Cótchico, M.; Melián, G.; Asensio-Ramos, M.; Padrón, E.; Hernández, P. A.; Pérez, N. M.

2017-12-01

Tenerife North-West Rift-Zone (NWRZ) is the most active volcano of the oceanic active volcanic island of Tenerife and the scenario of three historical eruptions (Boca Cangrejo S. XVI, Arenas Negras 1706 and Chinyero 1909). Since no visible degassing (fumaroles, etc.) at Tenerife NWRZ occurs, a geochemical monitoring program at Tenerife NWRZ was established mainly consisting on performing soil CO2 efflux surveys (50 surveys since 2000) to evaluate the temporal and spatial variations of soil CO2 efflux measurements and the diffuse CO2 emission rate. To do so, about 340 sampling sites were selected for each survey to obtain a homogeneous distribution after taking into consideration the local geology, structure, and accessibility. Measurements of soil CO2 efflux were performed in situ by means of a portable non-dispersive infrared sensor following the accumulation chamber method. The soil CO2 efflux values of the 2017 survey ranged from non-detectable to 46.6 g m-2 d-1. Statistical-graphical analysis of the 2017 data show two different geochemical populations; background (B) and peak (P) represented by 93.3% and 1.9% of the total data, respectively. The geometric means of the B and P populations are 2.4 and 19.1 g m-2 d-1, respectively. Most of the area showed B values while the P values were mainly observed at the N-W side of the volcanic rift. To estimate the diffuse CO2 emission in metric tons per day released from Tenerife NWRZ (75 km2) for the 2017 survey, we ran about 100 sGs simulations. The estimated 2017 diffuse CO2 output released to atmosphere by the Tenerife NWRZ volcano was 297 ± 13 t d-1. This 2017 diffuse CO2 emission rate value is relatively higher than the estimated background value (144 t d-1) and falls within the estimated background range (72 - 321 t d-1) observed for Tenerife NWRZ volcano during the 2000-2017 period. The observed temporal variation in the diffuse CO2 degassing output during this period does not seem to be driven by external factors and it shows a clear temporal correlation with the onsets of seismic activity (Hernández et al., 2017, Bull. Volcanol.). Monitoring the diffuse CO2 emission contributes to detect early warning signals of volcanic unrest at the Tenerife North-West Rift-Zone volcano.

Growth enhancement of Quercus alba saplings by CO[sub 2] enrichment under field conditions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Norby, R.J.; O'Neill, E.G.; Wullschleger, S.D.

1993-06-01

White oak (Quercus alba L.) trees were grown in soil under field conditions for four growing seasons in open-top chambers containing ambient air continuously enriched with 0, 150, or 300 [mu]mol/mol CO[sub 2]. The trees were significantly larger in elevated CO[sub 2]: whole-tree mass (including woody roots) was 36% greater in +150 and 140% greater in +300 compared to ambient-grown trees. There were no significant effects of CO[sub 2] concentration on root-to-shoot or leaf area ratios. The stimulatory effect of CO[sub 2] occurred during seedling establishment, and there was no effect of CO[sub 2] on relative growth rate after themore » first field season. However, photosynthesis remained consistently higher in elevated CO[sub 2], foliar respiration was reduced, and fine root density and CO[sub 2] efflux from the soil were higher, as previously reported with yellow- poplar trees.« less

Response of Stem Respiration of Two Tropical Species to an Imposed Drought

NASA Astrophysics Data System (ADS)

Brigham, L.; Van Haren, J. L. M.

2015-12-01

Increased instances of drought are predicted for tropical forests; therefore, it is important to better understand how drought will affect individual aspects of the forest carbon cycle. Through photosynthesis, CO2 is assimilated into sugars, a dominant portion of which goes to the stems where it is used for growth and cell maintenance. Both processes produce CO2 through respiration, which leaves the stem through the bark. This investigation focused on how stem CO2 efflux differs between two tree species in the tropical rainforest biome of Biosphere 2 in Oracle, Arizona—a species of legume (Clitoria racemosa) and a species of non-legume (Phytolacca dioica). A flexible chamber was strapped to each tree and the CO2 that diffused across the bark was measured with a LI-7000. A 4-week long drought was imposed in an effort to simulate future conditions resulting from climate change. It was found that C. racemosa had an overall higher CO2 efflux than P. dioica. C. racemosa has thinner bark than P. dioica, which displays a secondary thickening of its stem as a result of successive cambia; therefore, CO2 could more easily diffuse from the stems of C. racemosa. The results also indicate that decreased soil moisture, as a result of the drought, leads to a significantly lower CO2 efflux from C. racemosa whereas no significant change was observed in P. dioica. This suggests that C. racemosa is more sensitive to water stress than P. dioica, which may have greater water storage capabilities due to its successive cambia. The differing reactions of C. racemosa and P. dioica to decreased soil moisture could be important for calculating carbon stocks and modeling the response of tropical trees to drought.

Do Tree Stems Recapture Respired CO2?

NASA Astrophysics Data System (ADS)

Hilman, B.; Angert, A.

2016-12-01

Tree stem respiration is an important, yet not well understood, component of the terrestrial carbon cycle. Predicting how trees as whole organisms respond to changes in climate and atmospheric CO2 requires understanding of the variability in the fraction of assimilated carbon allocated to respiration, versus the allocation to growth, damage repair, and to rhizosphere symbionts. Here we used the ratio of CO2 efflux/O2 influx (Apparent Respiratory Quotient, ARQ) to study stem respiration. The ARQ in trees stems is predicted to be 1.0, as a result of carbohydrates metabolism. Lower than 1.0 ARQ values may indicate a local assimilation of respired CO2, or dissolution and transport of CO2 in the xylem stream. We measured stems ARQ in 16 tree species at tropical, Mediterranean and temperate ecosystems using stem chambers and in-vitro incubations. The CO2 and O2 were measured by a system we developed, which is based on an IRGA and a Fuel-cell O2 analyzer (Hilman and Angert 2016). We found typical values of ARQ in the range of 0.4-0.8. Since incubations of detach stem tissues yielded similar ARQ values, and since the influence of natural variations in the transpiration stream on ARQ was found to be small, we conclude that the removal of the respired CO2 is not via dissolution in the xylem stream. Using 13C labeling, dark fixation of stem tissues was detected, which is most probably phosphoenolpyruvate carboxylase (PEPC) mediated. Hence, we suggest that in-stem dark fixation of respired CO2 to organic acids (e.g. malate) affects the outgoing efflux. Further research should determine if these organic acids are transported to the canopy, stored in the stem, or transported to the roots to serve as exudates. Hilman B, Angert A (2016) Measuring the ratio of CO2 efflux to O2 influx in tree stem respiration. Tree Physiol 2016, doi: 10.1093/treephys/tpw057

Elevated CO2 and nitrogen effects on soil CO2 flux from a pasture upon return to cultivation

USDA-ARS?s Scientific Manuscript database

Soil CO2 efflux patterns associated with converting pastures back to row crop production remain understudied in the Southeastern U.S. A 10-year study of bahiagrass (Paspalum notatum Flüggé) response to elevated CO2 was conducted using open top field chambers on a Blanton loamy sand (loamy siliceous,...

Experimental fire increases soil carbon dioxide efflux in a grassland long-term multifactor global change experiment.

PubMed

Strong, Aaron L; Johnson, Tera P; Chiariello, Nona R; Field, Christopher B

2017-05-01

Numerous studies have demonstrated that soil respiration rates increase under experimental warming, although the long-term, multiyear dynamics of this feedback are not well constrained. Less is known about the effects of single, punctuated events in combination with other longer-duration anthropogenic influences on the dynamics of soil carbon (C) loss. In 2012 and 2013, we assessed the effects of decadal-scale anthropogenic global change - warming, increased nitrogen (N) deposition, elevated carbon dioxide (CO 2 ), and increased precipitation - on soil respiration rates in an annual-dominated Mediterranean grassland. We also investigated how controlled fire and an artificial wet-up event, in combination with exposure to the longer-duration anthropogenic global change factors, influenced the dynamics of C cycling in this system. Decade-duration surface soil warming (1-2 °C) had no effect on soil respiration rates, while +N addition and elevated CO 2 concentrations increased growing-season soil CO 2 efflux rates by increasing annual aboveground net primary production (NPP) and belowground fine root production, respectively. Low-intensity experimental fire significantly elevated soil CO 2 efflux rates in the next growing season. Based on mixed-effects modeling and structural equation modeling, low-intensity fire increased growing-season soil respiration rates through a combination of three mechanisms: large increases in soil temperature (3-5 °C), significant increases in fine root production, and elevated aboveground NPP. Our study shows that in ecosystems where soil respiration has acclimated to moderate warming, further increases in soil temperature can stimulate greater soil CO 2 efflux. We also demonstrate that punctuated short-duration events such as fire can influence soil C dynamics with implications for both the parameterization of earth system models (ESMs) and the implementation of climate change mitigation policies that involve land-sector C accounting. © 2016 John Wiley & Sons Ltd.

Burrows of the semi-terrestrial crab Ucides cordatus enhance CO2 release in a North Brazilian mangrove forest.

PubMed

Pülmanns, Nathalie; Diele, Karen; Mehlig, Ulf; Nordhaus, Inga

2014-01-01

Ucides cordatus is an abundant mangrove crab in Brazil constructing burrows of up to 2 m depth. Sediment around burrows may oxidize during low tides. This increase in sediment-air contact area may enhance carbon degradation processes. We hypothesized that 1) the sediment CO2 efflux rate is greater with burrows than without and 2) the reduction potential in radial profiles in the sediment surrounding the burrows decreases gradually, until approximating non-bioturbated conditions. Sampling was conducted during the North Brazilian wet season at neap tides. CO2 efflux rates of inhabited burrows and plain sediment were measured with a CO2/H2O gas analyzer connected to a respiration chamber. Sediment redox potential, pH and temperature were measured in the sediment surrounding the burrows at horizontal distances of 2, 5, 8 and 15 cm at four sediment depths (1, 10, 30 and 50 cm) and rH values were calculated. Sediment cores (50 cm length) were taken to measure the same parameters for plain sediment. CO2 efflux rates of plain sediment and individual crab burrows with entrance diameters of 7 cm were 0.7-1.3 µmol m(-2) s(-1) and 0.2-0.4 µmol burrows(-1) s(-1), respectively. CO2 released from a Rhizophora mangle dominated forest with an average of 1.7 U. cordatus burrows(-1) m(-2) yielded 1.0-1.7 µmol m(-2) s(-1), depending on the month and burrow entrance diameter. Laboratory experiments revealed that 20-60% of the CO2 released by burrows originated from crab respiration. Temporal changes in the reduction potential in the sediment surrounding the burrows did not influence the CO2 release from burrows. More oxidized conditions of plain sediment over time may explain the increase in CO2 release until the end of the wet season. CO2 released by U. cordatus and their burrows may be a significant pathway of CO2 export from mangrove sediments and should be considered in mangrove carbon budget estimates.

Burrows of the Semi-Terrestrial Crab Ucides cordatus Enhance CO2 Release in a North Brazilian Mangrove Forest

PubMed Central

Pülmanns, Nathalie; Diele, Karen; Mehlig, Ulf; Nordhaus, Inga

2014-01-01

Ucides cordatus is an abundant mangrove crab in Brazil constructing burrows of up to 2 m depth. Sediment around burrows may oxidize during low tides. This increase in sediment-air contact area may enhance carbon degradation processes. We hypothesized that 1) the sediment CO2 efflux rate is greater with burrows than without and 2) the reduction potential in radial profiles in the sediment surrounding the burrows decreases gradually, until approximating non-bioturbated conditions. Sampling was conducted during the North Brazilian wet season at neap tides. CO2 efflux rates of inhabited burrows and plain sediment were measured with a CO2/H2O gas analyzer connected to a respiration chamber. Sediment redox potential, pH and temperature were measured in the sediment surrounding the burrows at horizontal distances of 2, 5, 8 and 15 cm at four sediment depths (1, 10, 30 and 50 cm) and rH values were calculated. Sediment cores (50 cm length) were taken to measure the same parameters for plain sediment. CO2 efflux rates of plain sediment and individual crab burrows with entrance diameters of 7 cm were 0.7–1.3 µmol m−2 s−1 and 0.2–0.4 µmol burrows−1 s−1, respectively. CO2 released from a Rhizophora mangle dominated forest with an average of 1.7 U. cordatus burrows−1 m−2 yielded 1.0–1.7 µmol m−2 s−1, depending on the month and burrow entrance diameter. Laboratory experiments revealed that 20–60% of the CO2 released by burrows originated from crab respiration. Temporal changes in the reduction potential in the sediment surrounding the burrows did not influence the CO2 release from burrows. More oxidized conditions of plain sediment over time may explain the increase in CO2 release until the end of the wet season. CO2 released by U. cordatus and their burrows may be a significant pathway of CO2 export from mangrove sediments and should be considered in mangrove carbon budget estimates. PMID:25313661

Soil pCO2, soil respiration, and root activity in CO2 - fumigated and nitrogen-fertilized ponderosa pine

Treesearch

Dale Johnson; Donn Geisinger; Roger Walker; John Newman; James Vose; Katherine Elliott; Timothy Ball

1994-01-01

The purpose of this paper is to describe the effects of C02 and N treatments on soil pC02, calculated CO2 efflux, root biomass and soil carbon in open-top chambers planted with Pinus ponderosa seedlings. Based upon the literature, it was hypothesized that both elevated CO...

Elevational change in woody tissue CO2 efflux in a tropical mountain rain forest in southern Ecuador.

PubMed

Zach, Alexandra; Horna, Viviana; Leuschner, Christoph

2008-01-01

Much uncertainty exists about the magnitude of woody tissue respiration and its environmental control in highly diverse tropical moist forests. In a tropical mountain rain forest in southern Ecuador, we measured the apparent diurnal gas exchange of stems and coarse roots (diameter 1-4 cm) of trees from representative families along an elevational transect with plots at 1050, 1890 and 3050 m a.s.l. Mean air temperatures were 20.8, 17.2 and 10.6 degrees C, respectively. Stem and root CO(2) efflux of 13 to 21 trees per stand from dominant families were investigated with an open gas exchange system while stand microclimate was continuously monitored. Substantial variation in respiratory activity among and within species was found at all sites. Mean daily CO(2) release rates from stems declined 6.6-fold from 1.38 micromol m(-2) s(-1) at 1050 m to 0.21 micromol m(-2) s(-1) at 3050 m. Mean daily CO(2) release from coarse roots decreased from 0.35 to 0.20 micromol m(-2) s(-1) with altitude, but the differences were not significant. There was, thus, a remarkable shift from a high ratio of stem to coarse root respiration rates at the lowest elevation to an apparent equivalence of stem and coarse root CO(2) efflux rates at the highest elevation. We conclude that stem respiration, but not root respiration, greatly decreases with elevation in this transect, coinciding with a substantial decrease in relative stem diameter increment and a large increase in fine and coarse root biomass production with elevation.

Geochemical monitoring of Taal volcano (Philippines) by means of diffuse CO2 degassing studies

NASA Astrophysics Data System (ADS)

Padrón, Eleazar; Hernández, Pedro A.; Arcilla, Carlo; Pérez, Nemesio M.; Lagmay, Alfredo M.; Rodríguez, Fátima; Quina, Gerald; Alonso, Mar; Padilla, Germán D.; Aurelio, Mario A.

2017-04-01

Observing changes in the discharge rate of CO2 is an important part of volcanic monitoring programs, because it is released by progressive depressurization of magma during ascent and reach the surface well before their parental magma. Taal Volcano in Southwest Luzon, Philippines, lies between a volcanic arc front facing the subduction zone along the Manila Trench and a volcanic field formed from extension beyond the arc front. Taal Volcano Island is formed by a main tuff cone surrounded by several smaller tuff cones, tuff rings and scoria cones. This island is located in the center of the 30 km wide Taal Caldera, now filled by Taal Lake. To monitor the volcanic activity of Taal volcano is a priority task in the Philippines, because several million people live within a 20-km radius of Taal's caldera rim. During the last period of volcanic unrest from 2010 to 2011, the main crater lake of Taal volcano released the highest diffuse CO2 emission rates through the water surface reported to date by volcanic lakes worldwide. The maximum CO2 emission rate measured in the study period occurred two months before the strongest seismic activity recorded during the unrest period (Arpa et al., 2013, Bull Volcanol 75:747). After the unrest period, diffuse CO2 emission has remained in the range 532-860 t/d in the period 2013-2016. In January 2016, an automatic geochemical station to monitor in a continuous mode the diffuse CO2 degassing in a selected location of Taal, was installed in January 2016 to improve the early warning system at the volcano. The station is located at Daang Kastila, at the northern portion of the main crater rim. It measures hourly the diffuse CO2 efflux, atmospheric CO2 concentration, soil water content and temperature, wind speed and direction, air temperature and humidity, rainfall, and barometric pressure. The 2016 time series show CO2 efflux values in the range 20-690 g m-2 d-1.Soil temperature, heavily influenced by rainfall, ranged between 74 and 96oC. Although short-temp fluctuations in the diffuse CO2 emission time series at Daang Kastila were partially driven by meteorological parameters, the main CO2 efflux changes were not driven by fluctuations of meteorological variables such as wind speed or barometric pressure and seem clearly to be associated with fluid pressure fluctuations in the volcanic system. These results showed the potential of applying continuous and discrete monitoring of soil CO2 efflux to improve and optimize the detection of early warning signals of future volcanic unrest at Taal volcano.

Effects of waterlogging on carbon assimilate partitioning in the Zoigê alpine wetlands revealed by 13CO2 pulse labeling

PubMed Central

Gao, Jun-Qin; Gao, Ju-Juan; Zhang, Xue-Wen; Xu, Xing-Liang; Deng, Zhao-Heng; Yu, Fei-Hai

2015-01-01

Waterlogging has been suggested to affect carbon (C) turnover in wetlands, but how it affects C allocation and stocks remains unclear in alpine wetlands. Using in situ 13CO2 pulse labelling, we investigated C allocation in both waterlogged and non-waterlogged sites in the Zoigê wetlands on the Tibetan Plateau in August 2011. More than 50% of total 13C fixed by photosynthesis was lost via shoot respiration. Shoots recovered about 19% of total 13C fixed by photosynthesis at both sites. Only about 26% of total fixed 13C was translocated into the belowground pools. Soil organic C pool accounted for 19% and roots recovered about 5–7% of total fixed 13C at both sites. Waterlogging significantly reduced soil respiration and very little 13C was lost via soil respiration in the alpine wetlands compared to that in grasslands. We conclude that waterlogging did not significantly alter C allocations among the C pools except the 13CO2 efflux derived from soil respiration and that shoots made similar contributions to C sequestration as the belowground parts in the Zoigê alpine wetlands. Therefore, changes in waterlogging due to climate change will not affect C assimilate partitioning but soil C efflux. PMID:25797457

Influence of high-frequency ambient pressure pumping on carbon dioxide efflux from soil

Treesearch

Eugene S. Takle; William J. Massman; James R. Brandle; R. A. Schmidt; Xinhua Zhou; Irina V. Litvina; Rick Garcia; Geoffrey Doyle; Charles W. Rice

2004-01-01

We report measurements at 2Hz of pressure fluctuations at and beneath the soil in an agricultural field with dry soil and no vegetation. The objective of our study was to examine the possible role of pressure fluctuations produced by fluctuations in ambient wind on the efflux of CO2 at the soil surface.We observed that pressure fluctuations penetrate to 50 cm in the...

Intensive management modifies soil CO2 efflux in 6-year-old Pinus taeda L. stands

Treesearch

Lisa J. Samuelson; Kurt Johnsen; Tom Stokes; Weinlang Lu

2004-01-01

Intensive forestry may reduce net CO2 emission into atmosphere by storing carbon in living biomass, dead organic matter and soil, and durable wood products. Because quantification of belowground carbon dynamics is important for reliable estimation of the carbon sequestered by intensively managed plantations, we examined soil CO2...

REFINING THE DUAL ISOTOPE APPROACH TO DETERMINE FIELD ESTIMATES OF LITTER, ROOT, AND SOM COMPONENTS OF SOIL CO2 EFFLUX

EPA Science Inventory

Stable isotopes have become an important tool for determining the relative importance of CO2 sources and sinks contributing to the global carbon budget. Of particular importance is the determination of the terrestrial CO2 flux which is difficult to decipher without determining t...

Dryland Flood-Irrigation and its Impact on CO2 Production and the Accumulation of Pedogenic Carbonate in West Texas

NASA Astrophysics Data System (ADS)

Ortiz, A. C.; Jin, L.

2016-12-01

Agricultural fields in drylands are intensively irrigated. Indeed, pecan orchards at the El Paso, TX region are flooded with over one meter of water per growing season. The waters are usually oversaturated in calcite (CaCO3) and continuous evapotranspiration drives CaCO3 precipitation, releasing CO2. As such, the loading of CaCO3 through flood irrigation in drylands impacts Ca and C cycles greatly. We characterized soil, soil gas and soil water samples to quantify rates of pedogenic carbonate accumulation and CO2 release, identify the sources of C and Ca in pedogenic carbonates, and investigate kinetic and environmental controls of CaCO3 formation. Simple calculations show that up to 112000kg/km2/yr of Ca is loaded onto the fields by irrigation, evidenced by high water-soluble and acid-leachable Ca in soils, especially in clayey soils. We used 87Sr/86Sr ratios to quantify the relative importance of different Ca end-members including flood irrigation. Data show that water-soluble soil leachates have similar 87Sr/86Sr ratios as irrigation waters at depth, but lighter signatures at surface, probably due dust and fertilizer inputs. We measured daily soil-atmosphere CO2 efflux, δ13CCO2 and concentrations of CO2 gas samples at different soil depths between two irrigation events and at two sites with sandy versus clayey soils. These data help determine if sources of soil CO2 change with depth, irrigation event and if CO2 transport is controlled by texture. Correlations of δ13CCO2 and soil CO2 concentrations indicate mixing of organically respired, atmospheric and CaCO3-derived CO2. We found co-variation of δ13CCO2 and soil CO2 with time, where soil CO2 became heavier in carbon isotopes and more abundant in concentrations, illustrating shifts from soil respired CO2, characterized by lighter C, to increased proportions of CaCO3-derived CO2 with heavier C. Efflux data show peak values as soils dried, indicating supersaturation of soil waters and precipitation of pedogenic calcite. This efflux is also controlled by soil texture, as sandy soils emitted more CO2 than clayey soils, even if fine-textured soils contained more CaCO3. These findings can significantly impact CO2 modeling and can aid in extrapolating to larger scales.

Diffuse gas emissions at the Ukinrek Maars, Alaska: Implications for magmatic degassing and volcanic monitoring

USGS Publications Warehouse

Evans, William C.; Bergfeld, D.; McGimsey, R.G.; Hunt, A.G.

2009-01-01

Diffuse CO2 efflux near the Ukinrek Maars, two small volcanic craters that formed in 1977 in a remote part of the Alaska Peninsula, was investigated using accumulation chamber measurements. High CO2 efflux, in many places exceeding 1000 g m-2 d-1, was found in conspicuous zones of plant damage or kill that cover 30,000-50,000 m2 in area. Total diffuse CO2 emission was estimated at 21-44 t d-1. Gas vents 3-km away at The Gas Rocks produce 0.5 t d-1 of CO2 that probably derives from the Ukinrek Maars basalt based on similar ??13C values (???-6???), 3He/4He ratios (5.9-7.2 RA), and CO2/3He ratios (1-2 ?? 109) in the two areas. A lower 3He/4He ratio (2.7 RA) and much higher CO2/3He ratio (9 ?? 1010) in gas from the nearest arc-front volcanic center (Mount Peulik/Ugashik) provide a useful comparison. The large diffuse CO2 emission at Ukinrek has important implications for magmatic degassing, subsurface gas transport, and local toxicity hazards. Gas-water-rock interactions play a major role in the location, magnitude and chemistry of the emissions.

An Automated Chamber Network for Evaluation the Long-term Response and Feedback of Soil Carbon Dynamics to Global Change

NASA Astrophysics Data System (ADS)

Liang, N.; Kim, S.; Shimoyama, K.; Kim, Y.; Hirano, T.; Takagi, K.; Fujinuma, Y.; Mukai, H.; Takahashi, Y.; Kakubari, Y.; Wang, Q.; Nakane, K.

2007-12-01

Regional networks for measuring carbon sequestration or loss by terrestrial ecosystems on a year round basis have been in operation since the mid-1990s. However, continuous measurements of soil CO2 efflux, the largest component of ecosystem respiration have only been reported over similar time scales at a few of the sites. We have developed a multichannel automated chamber system that can be used for continuous measuring soil CO2 efflux. The system equips 8 to 24 large automated chambers (90*90*50 cm, L*W*H). Since 1997, we have installed the chamber systems in the tundra in west Siberia, boreal forest in Alaska, cool- temperate and temperate forests in Japan, Korea and China, tropical seasonal forest in Thailand, and tropical rainforest in Malaysia. Annual soil CO2 effluxes were estimated to be about 5-6 tC ha-1 y-1 in the boreal and cool-temperate forests, 10 tC ha-1 y-1 in the temperate forests, and 30 tC ha-1 y-1 in the tropical rainforests. Efflux showed significant seasonality in the boreal and temperate forest that corresponding with the seasonal soil temperature. However, the wavelike efflux rates in the tropical forests were correlated with the seasonality of soil moisture. From 2007, a big project that funded by Ministry of the Environment of Japan (MOE) has launched to evaluate the response and feedback of soil carbon dynamics of Japanese forest ecosystems to global change. We are installing another 6 chamber systems at the six of Japanese typical forests to conduct the soil warming experiments. For scaling-up the chamber experiments and understanding the mechanisms of soil organic matter (SOM) dynamics to global change, soil samples from about 100 forest ecosystems will be incubated for modeling development. Furthermore, the environmental (temperature and CO2) controlled large open-top chambers have been employed to investigate the balance of SOM (the input from litter falls and loss due to the decomposition) of forest ecosystems with global change.

Newer systems for bacterial resistances to toxic heavy metals.

PubMed Central

Silver, S; Ji, G

1994-01-01

Bacterial plasmids contain specific genes for resistances to toxic heavy metal ions including Ag+, AsO2-, AsO4(3-), Cd2+, Co2+, CrO4(2-), Cu2+, Hg2+, Ni2+, Pb2+, Sb3+, and Zn2+. Recent progress with plasmid copper-resistance systems in Escherichia coli and Pseudomonas syringae show a system of four gene products, an inner membrane protein (PcoD), an outer membrane protein (PcoB), and two periplasmic Cu(2+)-binding proteins (PcoA and PcoC). Synthesis of this system is governed by two regulatory proteins (the membrane sensor PcoS and the soluble responder PcoR, probably a DNA-binding protein), homologous to other bacterial two-component regulatory systems. Chromosomally encoded Cu2+ P-type ATPases have recently been recognized in Enterococcus hirae and these are closely homologous to the bacterial cadmium efflux ATPase and the human copper-deficiency disease Menkes gene product. The Cd(2+)-efflux ATPase of gram-positive bacteria is a large P-type ATPase, homologous to the muscle Ca2+ ATPase and the Na+/K+ ATPases of animals. The arsenic-resistance system of gram-negative bacteria functions as an oxyanion efflux ATPase for arsenite and presumably antimonite. However, the structure of the arsenic ATPase is fundamentally different from that of P-type ATPases. The absence of the arsA gene (for the ATPase subunit) in gram-positive bacteria raises questions of energy-coupling for arsenite efflux. The ArsC protein product of the arsenic-resistance operons of both gram-positive and gram-negative bacteria is an intracellular enzyme that reduces arsenate [As(V)] to arsenite [As(III)], the substrate for the transport pump. Newly studied cation efflux systems for Cd2+, Zn2+, and Co2+ (Czc) or Co2+ and Ni2+ resistance (Cnr) lack ATPase motifs in their predicted polypeptide sequences. Therefore, not all plasmid-resistance systems that function through toxic ion efflux are ATPases. The first well-defined bacterial metallothionein was found in the cyanobacterium Synechococcus. Bacterial metallothionein is encoded by the smtA gene and contains 56 amino acids, including nine cysteine residues (fewer than animal metallothioneins). The synthesis of Synechococcus metallothionein is regulated by a repressor protein, the product of the adjacent but separately transcribed smtB gene. Regulation of metallothionein synthesis occurs at different levels; quickly by derepression of repressor activity, or over a longer time by deletion of the repressor gene at fixed positions and by amplification of the metallothionein DNA region leading to multiple copies of the gene. PMID:7843081

Epigallocatechin gallate as a modulator of Campylobacter resistance to macrolide antibiotics.

PubMed

Kurinčič, Marija; Klančnik, Anja; Smole Možina, Sonja

2012-11-01

Comprehensive therapeutic use of macrolides in humans and animals is important in the selection of macrolide-resistant Campylobacter isolates. This study shows high co-resistance to erythromycin, azithromycin, clarithromycin, dirithromycin and tylosin, with contributions from the 23S rRNA gene and drug efflux systems. The CmeABC efflux pump plays an important role in reduced macrolide susceptibility, accompanied by contributions from the CmeDEF efflux pump and potentially a third efflux pump. To improve clinical performance of licensed antibiotics and chemotherapeutic agents, it is important to understand the factors in Campylobacter that affect susceptibility to macrolide antibiotics. Using mutants that lack the functional genes coding for the CmeB and CmeF efflux pump proteins and the CmeR transcriptional repressor, we show that these efflux pumps are potential targets for the development of therapeutic strategies that use a combination of a macrolide with an efflux pump inhibitor (EPI) to restore macrolide efficacy. The natural phenolic compound epigallocatechin gallate (EGCG) has good modulatory activity over the extrusion across the outer membrane of the macrolides tested, both in sensitive and resistant Campylobacter isolates. Comparing EGCG with known chemical EPIs, correlations in the effects on the particular macrolide antibiotics were seen. EGCG modifies Campylobacter multidrug efflux systems and thus could have an impact on restoring macrolide efficacy in resistant strains. Copyright © 2012 Elsevier B.V. and the International Society of Chemotherapy. All rights reserved.

Effects of fertilization on CO2 efflux in a two-year-old loblolly pine stand on the Virginia Piedmont

Treesearch

Michael Tyree; John Seiler; Thomas R. Fox

2006-01-01

Fertilization is becoming a common, cost effective treatment within managed forests of the Southeastern United States. However, there is little known about how fertilization will affect the belowground processes that drive soil CO2

A comparative meta-analysis of maximal aerobic metabolism of vertebrates: implications for respiratory and cardiovascular limits to gas exchange.

PubMed

Hillman, Stanley S; Hancock, Thomas V; Hedrick, Michael S

2013-02-01

Maximal aerobic metabolic rates (MMR) in vertebrates are supported by increased conductive and diffusive fluxes of O(2) from the environment to the mitochondria necessitating concomitant increases in CO(2) efflux. A question that has received much attention has been which step, respiratory or cardiovascular, provides the principal rate limitation to gas flux at MMR? Limitation analyses have principally focused on O(2) fluxes, though the excess capacity of the lung for O(2) ventilation and diffusion remains unexplained except as a safety factor. Analyses of MMR normally rely upon allometry and temperature to define these factors, but cannot account for much of the variation and often have narrow phylogenetic breadth. The unique aspect of our comparative approach was to use an interclass meta-analysis to examine cardio-respiratory variables during the increase from resting metabolic rate to MMR among vertebrates from fish to mammals, independent of allometry and phylogeny. Common patterns at MMR indicate universal principles governing O(2) and CO(2) transport in vertebrate cardiovascular and respiratory systems, despite the varied modes of activities (swimming, running, flying), different cardio-respiratory architecture, and vastly different rates of metabolism (endothermy vs. ectothermy). Our meta-analysis supports previous studies indicating a cardiovascular limit to maximal O(2) transport and also implicates a respiratory system limit to maximal CO(2) efflux, especially in ectotherms. Thus, natural selection would operate on the respiratory system to enhance maximal CO(2) excretion and the cardiovascular system to enhance maximal O(2) uptake. This provides a possible evolutionary explanation for the conundrum of why the respiratory system appears functionally over-designed from an O(2) perspective, a unique insight from previous work focused solely on O(2) fluxes. The results suggest a common gas transport blueprint, or Bauplan, in the vertebrate clade.

Drought stress and tree size determine stem CO2 efflux in a tropical forest.

PubMed

Rowland, Lucy; da Costa, Antonio C L; Oliveira, Alex A R; Oliveira, Rafael S; Bittencourt, Paulo L; Costa, Patricia B; Giles, Andre L; Sosa, Azul I; Coughlin, Ingrid; Godlee, John L; Vasconcelos, Steel S; Junior, João A S; Ferreira, Leandro V; Mencuccini, Maurizio; Meir, Patrick

2018-06-01

CO 2 efflux from stems (CO 2_stem ) accounts for a substantial fraction of tropical forest gross primary productivity, but the climate sensitivity of this flux remains poorly understood. We present a study of tropical forest CO 2_stem from 215 trees across wet and dry seasons, at the world's longest running tropical forest drought experiment site. We show a 27% increase in wet season CO 2_stem in the droughted forest relative to a control forest. This was driven by increasing CO 2_stem in trees 10-40 cm diameter. Furthermore, we show that drought increases the proportion of maintenance to growth respiration in trees > 20 cm diameter, including large increases in maintenance respiration in the largest droughted trees, > 40 cm diameter. However, we found no clear taxonomic influence on CO 2_stem and were unable to accurately predict how drought sensitivity altered ecosystem scale CO 2_stem , due to substantial uncertainty introduced by contrasting methods previously employed to scale CO 2_stem fluxes. Our findings indicate that under future scenarios of elevated drought, increases in CO 2_stem may augment carbon losses, weakening or potentially reversing the tropical forest carbon sink. However, due to substantial uncertainties in scaling CO 2_stem fluxes, stand-scale future estimates of changes in stem CO 2 emissions remain highly uncertain. © 2018 The Authors New Phytologist © 2018 New Phytologist Trust.

Linking Development and Determinacy with Organic Acid Efflux from Proteoid Roots of White Lupin Grown with Low Phosphorus and Ambient or Elevated Atmospheric CO2 Concentration1

PubMed Central

Watt, Michelle; Evans, John R.

1999-01-01

White lupin (Lupinus albus L.) was grown in hydroponic culture with 1 μm phosphorus to enable the development of proteoid roots to be observed in conjunction with organic acid exudation. Discrete regions of closely spaced, determinate secondary laterals (proteoid rootlets) emerged in near synchrony on the same plant. One day after reaching their final length (4 mm), citrate exudation occurred over a 3-d pulse. The rate of exudation varied diurnally, with maximal rates during the photoperiod. At the onset of citrate efflux, rootlets had exhausted their apical meristems and had differentiated root hairs and vascular tissues along their lengths. Neither in vitro phosphoenolpyruvate carboxylase nor citrate synthase activity was correlated with the rate of citrate exudation. We suggest that an unidentified transport process, presumably at the plasma membrane, regulates citrate efflux. Growth with elevated (700 μL L−1) atmospheric [CO2] promoted earlier onset of rootlet determinacy by 1 d, resulting in shorter rootlets and citrate export beginning 1 d earlier as a 2-d diurnal pulse. Citrate was the dominant organic acid exported, and neither the rate of exudation per unit length of root nor the composition of exudate was altered by atmospheric [CO2]. PMID:10398705

Linking development and determinacy with organic acid efflux from proteoid roots of white lupin grown with low phosphorus and ambient or elevated atmospheric CO{sub 2} concentration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Watt, M.; Evans, J.R.

1999-07-01

White lupin (Lupinus albus L.) was grown in hydroponic culture with 1 {micro}M phosphorus to enable the development of proteoid roots to be observed in conjunction with organic acid exudation. Discrete regions of closely spaced, determinate secondary laterals emerged in near synchrony on the same plant. One day after reaching their final length, citrate exudation occurred over a 3-d pulse. The rate of exudation varied diurnally, with maximal rates during the photoperiod. At the onset of citrate efflux, rootlets had exhausted their apical meristems and had differentiated root hairs and vascular tissues along their lengths. Neither in vitro phosphoenolpyruvate carboxylasemore » nor citrate synthase activity was correlated with the rate of citrate exudation. The authors suggest that an unidentified transport process, presumably at the plasma membrane, regulates citrate efflux. Growth with elevated atmospheric [CO{sub 2}] promoted earlier onset of rootlet determinacy by 1 d, resulting in shorter rootlets and citrate export beginning 1 d earlier as a 2-d diurnal pulse. Citrate was the dominant organic acid exported, and neither the rate of exudation per unit length of root nor the composition of exudate was altered by atmospheric [CO{sub 2}].« less

Soil CO2 efflux measurement network by means of closed static chambers to monitor volcanic activity at Tenerife, Canary Islands

NASA Astrophysics Data System (ADS)

Amonte, Cecilia; García-Merino, Marta; Asensio-Ramos, María; Melián, Gladys; García-Hernández, Rubén; Pérez, Aaron; Hernández, Pedro A.; Pérez, Nemesio M.

2017-04-01

Tenerife (2304 km2) is the largest of the Canary Islands and has developed a central volcanic complex (Cañadas edifice), that started to grow about 3.5 My ago. Coeval with the construction of the Cañadas edifice, shield basaltic volcanism continued until the present along three rift zones oriented NW-SE, NE-SW and NS (hereinafter referred as NW, NE and NS respectively). Main volcanic historical activity has occurred along de NW and NE rift-zones, although summit cone of Teide volcano, in central volcanic complex, is the only area of the island where surface geothermal manifestations are visible. Uprising of deep-seated gases occurs along the aforementioned volcanic structures causing diffuse emissions at the surface environment of the rift-zones. In the last 20 years, there has been considerable interest in the study of diffuse degassing as a powerful tool in volcano monitoring programs. Diffuse degassing studies are even more important volcanic surveillance tool at those volcanic areas where visible manifestations of volcanic gases are absent. Historically, soil gas and diffuse degassing surveys in volcanic environments have focused mainly on CO2 because it is, after water vapor, the most abundant gas dissolved in magma. One of the most popular methods used to determine CO2 fluxes in soil sciences is based on the absorption of CO2 through an alkaline medium, in its solid or liquid form, followed by gravimetric, conductivity, or titration analyses. In the summer of 2016, a network of 31 closed static chambers was installed, covering the three main structural zones of Tenerife (NE, NW and NS) as well as Cañadas Caldera with volcanic surveillance porpoises. 50 cc of 0.1N KOH solution is placed inside the chamber to absorb the CO2 released from the soil. The solution is replaced weekly and the trapped CO2 is then analyzed at the laboratory by titration. The are expressed as weekly integrated CO2 efflux values. The CO2 efflux values ranged from 3.2 to 12.9 gṡm-2ṡd-1, with average values of 7.0 gṡm-2ṡd-1 for the NE rift-zone and 6.4 gṡm-2ṡd-1 for NW and NS rift-zones. The most significant CO2 efflux values were observed in the NE rift-zone, with maximum values of 12.5 gṡm-2ṡd-1. To investigate the origin of the soil CO2 at the three volcanic rifts, soil gas samples were weekly taken on the head space of the closed chambers to study the chemical composition and the isotopic composition of the CO2. Collected gas samples can be considered as CO2-enriched air, showing concentrations of CO2 in the range 370-22,448 ppmV, with average values of 2,859 ppmV, 1,396 ppmV and 1,216 ppmV for the NE, NW and NS rift-zones, respectively. The CO2isotopic composition, expressed as dxzC-CO2, indicates that most of the sampling sites exhibited CO2 composed by different mixing degrees between atmospheric and biogenic CO2 with slight inputs of deep-seated CO2, with mean values of -17.5‰ -13.6‰ and -16.4‰ for the NE, NW and NS rift-zones, respectively. The methodology presented here represents an inexpensive method that might help to detect early warning signals of future unrest episodes in Tenerife.

Cerebellar modulation of frontal cortex dopamine efflux in mice: relevance to autism and schizophrenia.

PubMed

Mittleman, Guy; Goldowitz, Daniel; Heck, Detlef H; Blaha, Charles D

2008-07-01

Cerebellar and frontal cortical pathologies have been commonly reported in schizophrenia, autism, and other developmental disorders. Whether there is a relationship between prefrontal and cerebellar pathologies is unknown. Using fixed potential amperometry, dopamine (DA) efflux evoked by cerebellar or, dentate nucleus electrical stimulation (50 Hz, 200 muA) was recorded in prefrontal cortex of urethane anesthetized lurcher (Lc/+) mice with 100% loss of cerebellar Purkinje cells and wildtype (+/+) control mice. Cerebellar stimulation with 25 and 100 pulses evoked prefrontal cortex DA efflux in +/+ mice that persisted for 12 and 25 s poststimulation, respectively. In contrast, 25 pulse cerebellar stimulation failed to evoke prefrontal cortex DA efflux in Lc/+ mice indicating a dependency on cerebellar Purkinje cell outputs. Dentate nucleus stimulation (25 pulses) evoked a comparable but briefer (baseline recovery within 7 s) increase in prefrontal cortex DA efflux compared to similar cerebellar stimulation in +/+ mice. However, in Lc/+ mice 25 pulse dentate nucleus evoked prefrontal cortex DA efflux was attenuated by 60% with baseline recovery within 4 s suggesting that dentate nucleus outputs to prefrontal cortex remain partially functional. DA reuptake blockade enhanced 100 pulse stimulation evoked prefrontal cortex responses, while serotonin or norepinephrine reuptake blockade were without effect indicating the specificity of the amperometric recordings to DA. Results provide neurochemical evidence that the cerebellum can modulate DA efflux in the prefrontal cortex. Together, these findings may explain why cerebellar and frontal cortical pathologies co-occur, and may provide a mechanism that accounts for the diversity of symptoms common to multiple developmental disorders.

Cerebellar Modulation of Frontal Cortex Dopamine Efflux in Mice: Relevance to Autism and Schizophrenia

PubMed Central

MITTLEMAN, GUY; GOLDOWITZ, DANIEL; HECK, DETLEF H.; BLAHA, CHARLES D.

2013-01-01

Cerebellar and frontal cortical pathologies have been commonly reported in schizophrenia, autism, and other developmental disorders. Whether there is a relationship between prefrontal and cerebellar pathologies is unknown. Using fixed potential amperometry, dopamine (DA) efflux evoked by cerebellar or, dentate nucleus electrical stimulation (50 Hz, 200 μA) was recorded in prefrontal cortex of urethane anesthetized lurcher (Lc/+) mice with 100% loss of cerebellar Purkinje cells and wildtype (+/+) control mice. Cerebellar stimulation with 25 and 100 pulses evoked prefrontal cortex DA efflux in +/+ mice that persisted for 12 and 25 s poststimulation, respectively. In contrast, 25 pulse cerebellar stimulation failed to evoke prefrontal cortex DA efflux in Lc/+ mice indicating a dependency on cerebellar Purkinje cell outputs. Dentate nucleus stimulation (25 pulses) evoked a comparable but briefer (baseline recovery within 7 s) increase in prefrontal cortex DA efflux compared to similar cerebellar stimulation in +/+ mice. However, in Lc/+ mice 25 pulse dentate nucleus evoked prefrontal cortex DA efflux was attenuated by 60% with baseline recovery within 4 s suggesting that dentate nucleus outputs to prefrontal cortex remain partially functional. DA reuptake blockade enhanced 100 pulse stimulation evoked pre-frontal cortex responses, while serotonin or norepinephrine reuptake blockade were without effect indicating the specificity of the amperometric recordings to DA. Results provide neurochemical evidence that the cerebellum can modulate DA efflux in the prefrontal cortex. Together, these findings may explain why cerebellar and frontal cortical pathologies co-occur, and may provide a mechanism that accounts for the diversity of symptoms common to multiple developmental disorders. PMID:18435424

Seasonal variations of the amount of carbon allocated to respiration after in situ 13CO2 pulse labelling of trees (Invited)

NASA Astrophysics Data System (ADS)

Epron, D.; Dannoura, M.; Ngao, J.; Plain, C.; Berveller, D.; Chipeaux, C.; Gerant, D.; Bosc, A.; Maillard, P.; Loustau, D.; Damesin, C.; Cats Project (Anr-07-Blan-0109)

2010-12-01

Soil and trunk respiration are the major sources of carbon from forest ecosystems to the atmosphere and they account for a large fraction of total ecosystem respiration. The amount of photosynthate allocated to respiration affects the growth of the tree and the potential for carbon sequestration of forest ecosystems. This study, aiming at understanding patterns of carbon allocation to respiration among species and seasons, consisted in pure 13CO2 labelling of the entire crown of three different tree species (beech, oak and pine) at distinct phenological stages between Sept 2008 and Feb 2010. 13C was then tracked for several weeks in soil and trunk CO2 efflux at high temporal resolution using tuneable diode laser absorption spectrometry (Plain et al. 2009). Recovery of 13C in trunk and soil CO2 efflux was observed a few couple of hours after the beginning of the labelling in oak and beech. There is a rapid transfer of 13C belowground with a maximum occurring within 2 to 4 days after labelling. Label was recovered at the same time in the respiration and in the biomass of both fine roots and microbes. Maximum recovery occurred earlier in beech and oak, while it happened later in Pine. Indeed, the velocity of phloem transport, calculated as the difference of time lags in 13C recovery in trunk respiration at different height, was around 0.10-0.2m/h in pine and around 0.2-1.2 m/h in oak and beech, reflecting difference in phloem anatomy between angiosperm and gymnosperm. The cumulated amount of label recovered in soil CO2 efflux 20 days after labelling varied among the seasons in all species, from 1 to 16% in beech, 2 to 11% in oak and 1 to 11% in pine. For all species, allocation to soil respiration was greater in early summer compared to spring, late summer and autumn. A compartmental analysis is further conducted to characterise functional pools of labelled substrates and storage compounds that contribute to both trunk and soil respiration. [Plain C, Gérant D, Maillard P, Dannoura M, Dong Y, Zeller B, Priault P, Parent F, Epron D. 2009. Tracing of recently assimilated carbon in respiration at high temporal resolution in the field with a tuneable diode laser absorption spectrometer after in situ 13CO2 pulse labelling of 20-year-old beech trees. Tree Physiology 29: 1433-1447.

Microbial physiology and soil CO2 efflux after 9 years of soil warming in a temperate forest - no indications for thermal adaptations.

PubMed

Schindlbacher, Andreas; Schnecker, Jörg; Takriti, Mounir; Borken, Werner; Wanek, Wolfgang

2015-11-01

Thermal adaptations of soil microorganisms could mitigate or facilitate global warming effects on soil organic matter (SOM) decomposition and soil CO2 efflux. We incubated soil from warmed and control subplots of a forest soil warming experiment to assess whether 9 years of soil warming affected the rates and the temperature sensitivity of the soil CO2 efflux, extracellular enzyme activities, microbial efficiency, and gross N mineralization. Mineral soil (0-10 cm depth) was incubated at temperatures ranging from 3 to 23 °C. No adaptations to long-term warming were observed regarding the heterotrophic soil CO2 efflux (R10 warmed: 2.31 ± 0.15 μmol m(-2)  s(-1) , control: 2.34 ± 0.29 μmol m(-2)  s(-1) ; Q10 warmed: 2.45 ± 0.06, control: 2.45 ± 0.04). Potential enzyme activities increased with incubation temperature, but the temperature sensitivity of the enzymes did not differ between the warmed and the control soils. The ratio of C : N acquiring enzyme activities was significantly higher in the warmed soil. Microbial biomass-specific respiration rates increased with incubation temperature, but the rates and the temperature sensitivity (Q10 warmed: 2.54 ± 0.23, control 2.75 ± 0.17) did not differ between warmed and control soils. Microbial substrate use efficiency (SUE) declined with increasing incubation temperature in both, warmed and control, soils. SUE and its temperature sensitivity (Q10 warmed: 0.84 ± 0.03, control: 0.88 ± 0.01) did not differ between warmed and control soils either. Gross N mineralization was invariant to incubation temperature and was not affected by long-term soil warming. Our results indicate that thermal adaptations of the microbial decomposer community are unlikely to occur in C-rich calcareous temperate forest soils. © 2015 The Authors. Global Change Biology published by John Wiley & Sons Ltd.

Effects of outplanting horticultural species on soil CO2 efflux

USDA-ARS?s Scientific Manuscript database

Increased atmospheric carbon dioxide (CO2) concentration is widely thought to be the main driving factor behind global climate change. Much of the work on reducing greenhouse gas (GHG) emissions and methods of carbon (C) sequestration has been conducted in row crop and forest systems; however, virt...

Long- and short-term temporal variations of the diffuse CO2 emission from Timanfaya volcano, Lanzarote, Canary Islands

NASA Astrophysics Data System (ADS)

Hernández, P. A.; Padilla, G.; Calvo, D.; Padrón, E.; Melian, G.; Dionis, S.; Nolasco, D.; Barrancos, J.; Rodríguez, F.; Pérez, N.

2012-04-01

Lanzarote Island is an emergent part of the East Canary Ridge and it is situated approximately 100 km from the NW coast of Morocco, covering an area of about 795km2. The largest historical eruption of the Canary Islands, Timanfaya, took place during 1730-36 in this island when long-term eruptions from a NE-SW-trending fissure formed the Montañas del Fuego. The last eruption at Lanzarote Island occurred during 1824, Tinguaton volcano, and produced a much smaller lava flow that reached the SW coast. At present, one of the most prominent phenomena at Timanfaya volcanic field is the high maintained superficial temperatures occurring in the area since the 1730 volcanic eruption. The maximum temperatures recorded in this zone are 605°C, taken in a slightly inclined well 13 m deep. Since fumarolic activity is absent at the surface environment of Lanzarote, to study the diffuse CO2 emission becomes an ideal geochemical tool for monitoring its volcanic activity. Soil CO2 efflux surveys were conducted throughout Timanfaya volcanic field and surrounding areas during the summer periods of 2006, 2007, 2008, 2009, fall period of 2010 and winter, spring and summer periods of 2011 to investigate long and short-term temporal variations of the diffuse CO2 emission from Timanfaya volcano. Soil CO2 efflux surveys were undertaken at Timanfaya volcanic field always under stable weather conditions to minimize effects of meteorological conditions on the CO2 at the soil atmosphere. Approximately 370-430 sampling sites were selected at the surface environment of Timanfaya to obtain an even distribution of the sampling points over the study area. The accumulation chamber method (Parkinson et al., 1981) was used to perform soil CO2 efflux measurements in-situ by means of a portable non dispersive infrared (NDIR) CO2 analyzer, which was interfaced to a hand size computer that runs data acquisition software. At each sampling site, soil temperature at 15 and 40cm depth was also measured by means of a thermocouple together with soil gas samples collected during the campaign of 2010 to evaluate the chemical and isotopic composition of soil gases. Diffuse CO2 emission values have ranged between non detectable values to 34 g m-2 d-1, and most of the study area have shown relatively low values, around the detection limit of the instrument (~0,5 g m-2 d-1). Higher soil CO2 diffuse emission values were observed where thermal anomalies occur, indicating a convective mechanism transport of gas from depth at these areas. Total CO2 outputs of the study area have been estimated in the range 41-518 t d-1 during the study period. Long-term temporal variation on total CO2 diffuse emission shows a peak recorded on winter 2011, suggesting a seasonal control on the CO2 emission. As part of the volcanic surveillance program and to understand the dynamics of CO2 diffuse emission at Timanfaya volcanic zone, an automatic geochemical station was installed in July 2010 to monitor the CO2 emission and investigate the short-term temporal variation. Time series of soil CO2 efflux shows also a close relationship with seasonal changes mainly due to rainfall.

Impacts of afforestation and silviculture on the soil C balance of tropical tree plantations: belowground C allocation, soil CO2 efflux and C accretion (Invited)

NASA Astrophysics Data System (ADS)

Epron, D.; Koutika, L.; Mareschal, L.; Nouvellon, Y.

2013-12-01

Tropical forest plantations will provide a large part of the global wood supply which is anticipated to increase sharply in the next decades, becoming a valuable source of income in many countries, where they also contribute to land use changes that impact the global carbon (C) cycle. Tropical forest plantations established on previous grasslands are potential C sinks offsetting anthropogenic CO2 emissions. When they are managed on short rotations, the aboveground biomass is frequently removed and transformed into wood products with short lifetimes. The soil is thus the only compartment for durable C sequestration. The soil C budget results from the inputs of C from litterfall, root turnover and residues left at logging stage, balanced by C losses through heterotrophic respiration and leaching of organic C with water flow. Intensive researches have been conducted these last ten years in eucalypt plantations in the Congo on the effects of management options on soil fertility improvement and C sequestration. Our aim is to review important results regarding belowground C allocation, soil CO2 efflux and C accretion in relation to management options. We will specifically address (i) the soil C dynamics after afforestation of a tropical savannah, (ii) the impact of post-harvest residue management, and (iii) the beneficial effect of introducing nitrogen fixing species for C sequestration. Our results on afforestation of previous savannah showed that mechanical soil disturbance for site preparation had no effect on soil CO2 efflux and soil C balance. Soil C increased after afforestation despite a rapid disappearance of the labile savannah-derived C because a large fraction of savannah-derived C is stable and the aboveground litter layer is as the major source of CO2 contributing to soil CO2 efflux. We further demonstrated that the C stock in and on the soil slightly increased after each rotation when large amounts of residues are left at logging stage and that most of eucalypt-derived C is recovered in the fine particulate organic matter fraction (0.25-0.05 mm) and the organo-mineral fraction (< 0.05 mm). While the early tree growth is related to the heterotrophic component of soil CO2 efflux, thus largely dependent on the nutrients released by the decomposition of organic residues left at harvest, the stabilization of the old soil organic C derived from the savannah may depends on the amount of organic residues left at harvest. A greater C accumulation was observed in the soil when eucalypts were grown in mixture with a nitrogen fixing tree despite similar aboveground litter fall and lower fine root biomass. A slowdown of C turnover related to N enrichment might thus be postulated in nitrogen-poor tropical soils, and mixed-species plantation with nitrogen fixing trees might be an important strategy of reforestation or afforestation to offset C emissions.

Monitoring fugitive CH4 and CO2 emissions from a closed landfill at Tenerife, Canary Islands

NASA Astrophysics Data System (ADS)

Asensio-Ramos, María; Tompkins, Mitchell R. K.; Turtle, Lara A. K.; García-Merino, Marta; Amonte, Cecilia; Rodrígez, Fátima; Padrón, Eleazar; Melián, Gladys V.; Padilla, Germán; Barrancos, José; Pérez, Nemesio M.

2017-04-01

Solid waste must be managed systematically to ensure environmental best practices. One of the ways to manage this huge problem is to systematic dispose waste materials in locations such as landfills. However, landfills could face possible threats to the environment such as groundwater pollution and the release of landfill gases (CH4, volatile organic compounds, etc.) to the atmosphere. These structures should be carefully filled, monitored and maintained while they are active and for up to 30 years after they are closed. Even after years of being closed, a systematically amount of landfill gas could be released to the atmosphere through its surface in a diffuse and fugitive form. During the period 1999-2016, we have studied the spatial-temporal distribution of the surface fugitive emission of CO2 and CH4 into the atmosphere in a cell in the Arico's municipal landfill (0.3 km2) at Tenerife, Canary Islands, Spain. This cell was operative until 2004, when it was filled and closed. Monitoring these diffuse landfill emissions provides information of how the closed landfill is degassing. To do so, we have performed 9 gas emission surveys during the period 1999-2016. Surface landfill CO2 efflux measurements were carried out at around 450 sampling site by means of a portable non-dispersive infrared spectrophotometer (NDIR) model LICOR Li800 following the accumulation chamber method. Landfill gases taken in the chamber were analyzed using a double channel VARIAN 4900 micro-GC. CH4 efflux measurements were computed combining CO2 efflux measurements and CH4/CO2 ratio in the landfill's surface gas. To quantify the total CH4 emission, CH4 efflux contour map was constructed using sequential Gaussian simulation (sGs) as interpolation method. In general, a decrease in the CO2 emission is observed since the cell was closed (2004) to the present. The total CO2 and CH4 diffuse emissions estimated in the 2016 survey were 4.54 ± 0.14 t d-1 and 268.65 ± 17.99 t d-1, respectively. These types of studies provide knowledge of how a landfill degasses and serves to public and private entities to establish effective systems for extraction of biogas. This aims not only to achieve higher levels of controlled gas release from landfills resulting in a higher level of energy production but also will contribute to minimize air pollution caused by them.

High temporal resolution tracing of up-and downward carbon transport in oak trees

NASA Astrophysics Data System (ADS)

Bloemen, Jasper; Ingrisch, Johannes; Bahn, Michael

2017-04-01

Carbon (C) allocation defines the flows of C between plant organs and their storage pools and metabolic processes and is therefore considered as an important determinant of forest C budgets and their responses to climate change. In trees, assimilates derived from leaf photosynthesis are transported via the phloem to above- and belowground sink tissues, where partitioning between growth, storage, and respiration occurs. At the same time, root- and aboveground respired CO2 can be dissolved in water and transported in the xylem tissue, thereby representing a secondary C flux of large magnitude. The relative magnitude of both fluxes in a same set of trees and their concurrent role in C allocation remains unclear. In this study, we 13C pulse labeled five year old potted oak (Quercus rubra) trees to investigate both the role of C transport via the phloem and xylem in C allocation. To this end trees were randomly assigned to two 13C labeling experiments: 1) a canopy labeling experiment using transparent canopy chambers and 2) a stem labeling experiment based on the infusion of 13C labeled water in the stem base. We used high-resolution laser-based measurements of the isotopic composition of stem and soil CO2 efflux to monitor both the down-and upward transport of 13C label. Additional tissue samples at stem, canopy and root level were analyzed to validate the assimilation of the label in tree tissues during transport. Overall, after both labeling experiments enrichment was observed in both stem and soil CO2 efflux, showing that the 13C label was removed from both xylem and phloem transport during up- and downward transport, respectively. Higher enrichments of CO2 efflux were observed after stem labeling as compared to canopy labeling, which implies that xylem transport strongly contributes to C lost to the atmosphere. This study is the first to show combined results from tracing of xylem and phloem transport of C for a same set of trees at high temporal resolution using a 13C labeling approach. Moreover, they extend results from previous studies on the tracing of phloem transport in trees to a tracing of both xylem and canopy transport as well as results from studies on the internal CO2 transport in species with high transpiration rates like poplar to species with lower transpiration rates like oak. The results further demonstrate the complex interplay of phloem and xylem transport of carbon and its role for the emission of respired CO2 from trees into the atmosphere.

Curcumin Affects Phase II Disposition of Resveratrol Through Inhibiting Efflux Transporters MRP2 and BCRP

PubMed Central

Ge, Shufan; Yin, Taijun; Xu, Beibei; Gao, Song; Hu, Ming

2015-01-01

Purpose To evaluate the impact of curcumin on the disposition of resveratrol phase II metabolites in vivo, and explain the observations by performing in vitro studies in transporter-overexpressed cells. Methods Pharmacokinetic studies of resveratrol with and without the co-administration of curcumin were performed in both FVB wild-type and Bcrp1 (−/−) mice. Human UGT1A9-overexpressing HeLa cells and human MRP2-overexpressing MDCK II-UGT1A1 cells were used as in vitro tools to further determine the impact of curcumin as a transporter inhibitor on resveratrol metabolites. Results We observed higher exposure of resveratrol conjugates in Bcrp1 (−/−) mice compared to wild-type mice. In wild-type mice, curcumin increased the AUC of resveratrol glucuronide by 4-fold compared to the mice treated without curcumin. The plasma levels of resveratrol and its sulfate conjugate also increased moderately. In Bcrp1 (−/−) mice, there was a further increase (6-fold increase) in AUC of resveratrol glucuronide observed when curcumin was co-administered compared to AUC values obtained in wild-type mice without curcumin treatment. In the presence of 50nM curcumin, the clearance of resveratrol-3-O-glucuronide and resveratrol-3-O-sulfate reduced in both MRP2-overexpressing MDCKII-UGT1A1 cells and Human UGT1A9-overexpressing HeLa cells. Conclusions These results suggest that curcumin alters the phase II distribution of resveratrol through inhibiting efflux transporters including MRP2 and BCRP. PMID:26502886

[Summer Greenhouse Gases Exchange Flux Across Water-air Interface in Three Water Reservoirs Located in Different Geologic Setting in Guangxi, China].

PubMed

Li, Jian-hong; Pu, Jun-bing; Sun, Ping-an; Yuan, Dao-xian; Liu, Wen; Zhang, Tao; Mo, Xue

2015-11-01

Due to special hydrogeochemical characteristics of calcium-rich, alkaline and DIC-rich ( dissolved inorganic carbon) environment controlled by the weathering products from carbonate rock, the exchange characteristics, processes and controlling factors of greenhouse gas (CO2 and CH4) across water-air interface in karst water reservoir show obvious differences from those of non-karst water reservoir. Three water reservoirs (Dalongdong reservoir-karst reservoir, Wulixia reservoir--semi karst reservoir, Si'anjiang reservoir-non-karst reservoir) located in different geologic setting in Guangxi Zhuang Autonomous Region, China were chosen to reveal characteristics and controlling factors of greenhouse gas exchange flux across water-air interface. Two common approaches, floating chamber (FC) and thin boundary layer models (TBL), were employed to research and contrast greenhouse gas exchange flux across water-air interface from three reservoirs. The results showed that: (1) surface-layer water in reservoir area and discharging water under dam in Dalongdong water reservoir were the source of atmospheric CO2 and CH4. Surface-layer water in reservoir area in Wulixia water reservoir was the sink of atmospheric CO2 and the source of atmospheric CH4, while discharging water under dam was the source of atmospheric CO2 and CH4. Surface-layer water in Si'anjiang water reservoir was the sink of atmospheric CO2 and source of atmospheric CH4. (2) CO2 and CH4 effluxes in discharging water under dam were much more than those in surface-layer water in reservoir area regardless of karst reservoir or non karst reservoir. Accordingly, more attention should be paid to the CO2 and CH4 emission from discharging water under dam. (3) In the absence of submerged soil organic matters and plants, the difference of CH4 effluxes between karst groundwater-fed reservoir ( Dalongdong water reservoir) and non-karst area ( Wulixia water reservoir and Si'anjiang water reservoir) was less. However, CO2 efflux in karst groundwater-fed reservoir was much higher than that of reservoir in non-karst area due to groundwater of DIC-rich input from karst aquifer and thermal stratification.

CO2 flux response to precipitation events in Juniperus osteosperma and Artemisia tridentata ecosystems using eddy covariance measurements

NASA Astrophysics Data System (ADS)

Ivans, S.; Hipps, L. E.

2003-04-01

Eddy covariance measurements were used to determine the seasonal changes of net CO_2 flux, and the response to intermittent precipitation events in juniper (Juniperus osteosperma) and sagebrush (Artemisia tridentata) plant communities in a semi-arid region in the Great Basin of the United States over the entire growing seasons of 2001 and 2002. The net CO_2 fluxes were negative or downward in each community during the spring when soil water availability was largest. During this time, rain events resulted in large increases of net CO_2 uptake in juniper within 24 hours after the rain. The relative increases were larger in the dry spring of 2001 compared to the wetter conditions of 2002. Response of sage to rain events in the spring was smaller in magnitude. During the dry periods of summer and early fall net CO_2 flux was upward at each site in both years. In these periods the respiration of soil and vegetation apparently exceeded any assimilation by the plants. During these dry periods increases in CO_2 efflux were observed at both sites following rain events, presumably as a result of increases in soil respiration. The response of CO_2 fluxes to these events lasted generally 2 to 3 days. During late fall and early winter, no significant changes in CO_2 fluxes were observed at either site in response to rainfall because of significantly lower temperatures and plant dormancy in the year 2001. However in 2002, because of warmer weather, rainfall events triggered a temporary change in the flux direction at both sites from CO_2 efflux to CO_2 uptake, suggesting that the plants were actively photosynthesizing. Energy balance closure values for both sites ranged from 0.75--0.80 in the moist conditions of spring, and increased to 0.80--0.85 in the dry conditions of summer and fall. It is not yet clear why energy balance closure is dependent upon the relative sizes of sensible and latent heat fluxes. The issue of whether or not to force closure by adding to the fluxes, including CO_2 is being investigated. KEY WORDS: CO_2 flux, juniper, sagebrush, eddy covariance

Soil respiration rates and δ13C(CO2) in natural beech forest (Fagus sylvatica L.) in relation to stand structure.

PubMed

Cater, Matjaz; Ogrinc, Nives

2011-06-01

Soil respiration rates were studied as a function of soil type, texture and light intensity at five selected natural beech forest stands with contrasting geology: stands on silicate bedrock at Kladje and Bricka in Pohorje, a stand on quartz sandstone at Vrhovo and two stands on a carbonate bedrock in the Karstic-Dinaric area in Kocevski Rog, Snezna jama and Rajhenav, Slovenia, during the growing season in 2005-2006. Soil respiration exhibited pronounced seasonal and spatial variations in the studied forest ecosystem plots. The CO(2) flux rates ranged from minimum averages of 2.3 μmol CO(2) m(-2) s(-1) (winter) to maximum averages of about 7 μmol CO(2) m(-2) s(-1) (summer) at all the investigated locations. An empirical model describing the relationship between soil respiration and soil temperature predicted seasonal variations in soil respiration reasonably well during 2006. Nevertheless, there were also some indications that soil moisture in relation to soil texture could influence the soil CO(2) efflux rates in both sampling seasons. It was shown that spatial variability of mean soil respiration at the investigated sites was high and strongly related to root biomass. Based on the [image omitted]  data, it was shown that new photoassimilates could account for a major part of the total soil respiration under canopy conditions in forest ecosystems where no carbonate rocks are present, indicating that microbial respiration could not always dominate bulk soil CO(2) fluxes. At Snezna jama and Rajhenav, the abiotic CO(2) derived from carbonate dissolution had a pronounced influence on CO(2) efflux accounting, on average, to ∼17%. Further spatial heterogeneity of soil respiration was clearly affected by management practice. Higher respiration rates as well as higher variability in respiration rates were observed in the virgin forest (Rajhenav) than in the management forest (Snezna jama) and could be related to a higher amount of detritus and consequently to less pronounced influence of inorganic pool to CO(2) efflux, lower mixing with atmospheric CO(2) and higher sensitivity to environmental changes. Major differences in soil carbon dynamics among these five forest ecosystems can be explained by the influence of bedrock geology (particularly, the presence or absence of carbonate minerals) and soil texture (affecting gas exchange with overlying air and soil moisture).

Anomalous increase of diffuse CO_{2} emission from Brava (Cape Verde): evidence of volcanic unrest or increase gas release from a stationary magma body?

NASA Astrophysics Data System (ADS)

García-Merino, Marta; García-Hernández, Rubén; Montrond, Eurico; Dionis, Samara; Fernandes, Paulo; Silva, Sonia V.; Alfama, Vera; Cabral, Jeremías; Pereira, Jose M.; Padrón, Eleazar; Pérez, Nemesio M.

2017-04-01

Brava (67 km2) is the southwestern most and the smallest inhabited island of the Cape Verde archipelago. It is located 18 km west of Fogo Island and rises 976 m from the sea level. Brava has not any documented historical eruptions, but its Holocene volcanism and relatively high seismic activity clearly indicate that it is an active volcanic island. Since there have been no historic eruptions in Brava, volcanic hazard awareness among the population and the authorities is very low; therefore, its volcano monitoring program is scarce. With the aim of helping to provide a multidisciplinary monitoring program for the volcanic surveillance of the island, diffuse CO2 emission surveys have been carried out since 2010; approximately every 2 years. Soil CO2 efflux measurements are periodically performed at ˜ 275 observation sites all over the island and after taking into consideration their accessibility and the island volcano-structural characteristics. At each sampling site, soil CO2 efflux measurement was performed by means of a portable NDIR sensor according to the accumulation chamber method. To quantify the total diffuse CO2 emission from Brava volcanic system, soil CO2 efflux maps were constructed using sequential Gaussian simulations (sGs). An increase trend of diffuse CO2 emission rate from 42 to 681 t d-1at Brava was observed; just one year prior the 2014-2015 Fogo eruption and almost three years before the anomalous seismic activity recorded on August 2016 with more than 1000 seismic events registered by the INMG on August 1st, 2016 (Bruno Faria, personal communication). Due to this anomalous seismic activity, a diffuse CO2 emission survey at Brava was performed from August 2 to 10, 2016, and the estimated degassing rate yield a value about 72 t d-1; typical background values. An additional survey was carried out from October 22 to November 6, 2016. For this last survey, the estimated diffuse CO2 emission from Brava showed the highest observed value with a degassing rate about 1.700 t d-1. These observed changes on diffuse CO2 emission are geochemical evidences which seem to support a volcanic unrest for the recent anomalous seismic activity registered at Brava.

Effects of elevated atmospheric CO2 concentration on leaf dark respiration of Xanthium strumarium in light and in darkness

PubMed Central

Wang, Xianzhong; Lewis, James D.; Tissue, David T.; Seemann, Jeffrey R.; Griffin, Kevin L.

2001-01-01

Leaf dark respiration (R) is an important component of plant carbon balance, but the effects of rising atmospheric CO2 on leaf R during illumination are largely unknown. We studied the effects of elevated CO2 on leaf R in light (RL) and in darkness (RD) in Xanthium strumarium at different developmental stages. Leaf RL was estimated by using the Kok method, whereas leaf RD was measured as the rate of CO2 efflux at zero light. Leaf RL and RD were significantly higher at elevated than at ambient CO2 throughout the growing period. Elevated CO2 increased the ratio of leaf RL to net photosynthesis at saturated light (Amax) when plants were young and also after flowering, but the ratio of leaf RD to Amax was unaffected by CO2 levels. Leaf RN was significantly higher at the beginning but significantly lower at the end of the growing period in elevated CO2-grown plants. The ratio of leaf RL to RD was used to estimate the effect of light on leaf R during the day. We found that light inhibited leaf R at both CO2 concentrations but to a lesser degree for elevated (17–24%) than for ambient (29–35%) CO2-grown plants, presumably because elevated CO2-grown plants had a higher demand for energy and carbon skeletons than ambient CO2-grown plants in light. Our results suggest that using the CO2 efflux rate, determined by shading leaves during the day, as a measure for leaf R is likely to underestimate carbon loss from elevated CO2-grown plants. PMID:11226264

Effects of elevated atmospheric CO2 concentration on leaf dark respiration of Xanthium strumarium in light and in darkness.

PubMed

Wang, X; Lewis, J D; Tissue, D T; Seemann, J R; Griffin, K L

2001-02-27

Leaf dark respiration (R) is an important component of plant carbon balance, but the effects of rising atmospheric CO(2) on leaf R during illumination are largely unknown. We studied the effects of elevated CO(2) on leaf R in light (R(L)) and in darkness (R(D)) in Xanthium strumarium at different developmental stages. Leaf R(L) was estimated by using the Kok method, whereas leaf R(D) was measured as the rate of CO(2) efflux at zero light. Leaf R(L) and R(D) were significantly higher at elevated than at ambient CO(2) throughout the growing period. Elevated CO(2) increased the ratio of leaf R(L) to net photosynthesis at saturated light (A(max)) when plants were young and also after flowering, but the ratio of leaf R(D) to A(max) was unaffected by CO(2) levels. Leaf R(N) was significantly higher at the beginning but significantly lower at the end of the growing period in elevated CO(2)-grown plants. The ratio of leaf R(L) to R(D) was used to estimate the effect of light on leaf R during the day. We found that light inhibited leaf R at both CO(2) concentrations but to a lesser degree for elevated (17-24%) than for ambient (29-35%) CO(2)-grown plants, presumably because elevated CO(2)-grown plants had a higher demand for energy and carbon skeletons than ambient CO(2)-grown plants in light. Our results suggest that using the CO(2) efflux rate, determined by shading leaves during the day, as a measure for leaf R is likely to underestimate carbon loss from elevated CO(2)-grown plants.

Large conductance Ca(2+)-activated K(+) channel (BKCa) activating properties of a series of novel N-arylbenzamides: Channel subunit dependent effects.

PubMed

Kirby, R W; Martelli, A; Calderone, V; McKay, N G; Lawson, K

2013-07-15

Large conductance calcium activated potassium channels (BKCa) are fundamental in the control of cellular excitability. Thus, compounds that activate BKCa channels could provide potential therapies in the treatment of pathologies of the cardiovascular and central nervous system. A series of novel N-arylbenzamide compounds, and the reference compound NS1619, were evaluated for BKCa channel opener properties in Human Embryonic Kidney (HEK293) cells expressing the human BKCa channel α-subunit alone or α+β1-subunit complex. Channel activity was determined using a non-radioactive Rb(+) efflux assay to construct concentration effect curves for each compound. All N-arylbenzamide compounds and NS1619 evoked significant (p <0.05) concentration related increases in Rb(+) efflux both in cells expressing α-subunit alone or α+β1-subunits. Co-expression of the β1-subunit modified the Rb(+) efflux responses, relative to that obtained in cells expressing the α-subunit alone, for most of the N-arylbenzamide compounds, in contrast to NS1619. The EC40 values of NS1619, BKMe1 and BKOEt1 were not significantly affected by the co-expression of the BKCa channel α+β1-subunits. In contrast, 5 other N-arylbenzamides (BKPr2, BKPr3, BKPr4, BKH1 and BKVV) showed a significant (p <0.05) 2- to 10-fold increase in EC40 values when tested on the BKCa α+β1-subunit expressing cells compared to BKCa α-subunit expressing cells. Further, the Emax values for BKPr4, BKVV and BKH1 were lower in the BKCa channel α+β1-subunit expressing cells. In conclusion, the N-arylbenzamides studied, like NS1619, were able to activate BKCa channels formed of the α-subunit only. The co-expression of the β1-subunit, however, modified the ability of certain compounds to active the channel leading to differentiated pharmacodynamic profiles. Copyright © 2013 Elsevier Ltd. All rights reserved.

Rhizosphere priming effects in two contrasting soils

NASA Astrophysics Data System (ADS)

Lloyd, Davidson; Kirk, Guy; Ritz, Karl

2015-04-01

Inputs of fresh plant-derived carbon may stimulate the turnover of existing soil organic matter by so-called priming effects. Priming may occur directly, as a result of nutrient 'mining' by existing microbial communities, or indirectly via population adjustments. However the mechanisms are poorly understood. We planted C4 Kikuyu grass (Pennisetum clandestinum) in pots with two contrasting C3 soils (clayey, fertile TB and sandy, acid SH), and followed the soil CO2 efflux and its δ13C. The extent of C deposition in the rhizosphere was altered by intermittently clipping the grass in half the pots; there were also unplanted controls. At intervals, pots were destructively sampled for root and shoot biomass. Total soil CO2 efflux was measured using a gas-tight PVC chamber fitted over bare soil, and connected to an infra-red gas analyser; the δ13C of efflux was measured in air sub-samples withdrawn by syringe. The extent of priming was inferred from the δ13C of efflux and the δ13C of the plant and soil end-members. In unclipped treatments, in both soils, increased total soil respiration and rhizosphere priming effects (RPE) were apparent compared to the unplanted controls. The TB soil had greater RPE overall. The total respiration in clipped TB soil was significantly greater than in the unplanted controls, but in the clipped SH soil it was not significantly different from the controls. Clipping affected plant C partitioning with greater allocation to shoot regrowth from about 4 weeks after planting. Total plant biomass decreased in the order TB unclipped > SH unclipped >TB clipped > SH clipped. The results are consistent with priming driven by microbial activation stimulated by rhizodeposits and by nitrogen demand from the growing plants under N limited conditions. Our data suggest that photosynthesis drives RPE and soil differences may alter the rate and intensity of RPE but not the direction.

A bacterial view of the periodic table: genes and proteins for toxic inorganic ions.

PubMed

Silver, Simon; Phung, Le T

2005-12-01

Essentially all bacteria have genes for toxic metal ion resistances and these include those for Ag+, AsO2-, AsO4(3-), Cd2+ Co2+, CrO4(2-), Cu2+, Hg2+, Ni2+, Pb2+, TeO3(2-), Tl+ and Zn2+. The largest group of resistance systems functions by energy-dependent efflux of toxic ions. Fewer involve enzymatic transformations (oxidation, reduction, methylation, and demethylation) or metal-binding proteins (for example, metallothionein SmtA, chaperone CopZ and periplasmic silver binding protein SilE). Some of the efflux resistance systems are ATPases and others are chemiosmotic ion/proton exchangers. For example, Cd2+-efflux pumps of bacteria are either inner membrane P-type ATPases or three polypeptide RND chemiosmotic complexes consisting of an inner membrane pump, a periplasmic-bridging protein and an outer membrane channel. In addition to the best studied three-polypeptide chemiosmotic system, Czc (Cd2+, Zn2+, and Co2), others are known that efflux Ag+, Cu+, Ni2+, and Zn2+. Resistance to inorganic mercury, Hg2+ (and to organomercurials, such as CH3Hg+ and phenylmercury) involve a series of metal-binding and membrane transport proteins as well as the enzymes mercuric reductase and organomercurial lyase, which overall convert more toxic to less toxic forms. Arsenic resistance and metabolizing systems occur in three patterns, the widely-found ars operon that is present in most bacterial genomes and many plasmids, the more recently recognized arr genes for the periplasmic arsenate reductase that functions in anaerobic respiration as a terminal electron acceptor, and the aso genes for the periplasmic arsenite oxidase that functions as an initial electron donor in aerobic resistance to arsenite.

A Triple Culture Model of the Blood-Brain Barrier Using Porcine Brain Endothelial cells, Astrocytes and Pericytes.

PubMed

Thomsen, Louiza Bohn; Burkhart, Annette; Moos, Torben

2015-01-01

In vitro blood-brain barrier (BBB) models based on primary brain endothelial cells (BECs) cultured as monoculture or in co-culture with primary astrocytes and pericytes are useful for studying many properties of the BBB. The BECs retain their expression of tight junction proteins and efflux transporters leading to high trans-endothelial electric resistance (TEER) and low passive paracellular permeability. The BECs, astrocytes and pericytes are often isolated from small rodents. Larger species as cows and pigs however, reveal a higher yield, are readily available and have a closer resemblance to humans, which make them favorable high-throughput sources for cellular isolation. The aim of the present study has been to determine if the preferable combination of purely porcine cells isolated from the 6 months old domestic pigs, i.e. porcine brain endothelial cells (PBECs) in co-culture with porcine astrocytes and pericytes, would compare with PBECs co-cultured with astrocytes and pericytes isolated from newborn rats with respect to TEER value and low passive permeability. The astrocytes and pericytes were grown both as contact and non-contact co-cultures as well as in triple culture to examine their effects on the PBECs for barrier formation as revealed by TEER, passive permeability, and expression patterns of tight junction proteins, efflux transporters and the transferrin receptor. This syngenic porcine in vitro BBB model is comparable to triple cultures using PBECs, rat astrocytes and rat pericytes with respect to TEER formation, low passive permeability, and expression of hallmark proteins signifying the brain endothelium (tight junction proteins claudin 5 and occludin, the efflux transporters P-glycoprotein (PgP) and breast cancer related protein (BCRP), and the transferrin receptor).

Soil Carbon Response to Soil Warming and Nitrogen Deposition in a Temperate Deciduous Forest

NASA Astrophysics Data System (ADS)

Parton, W. J.; Savage, K. E.; Davidson, E. A.; Trumbore, S.; Frey, S. D.

2011-12-01

While estimates of global soil C stocks vary widely, it is clear that soils store several times more C than is present in the atmosphere as CO2, and a significant fraction of soil C stocks are potentially subject to faster rates of decomposition in a warmer world. We address, through field based studies and modeling efforts, whether manipulations of soil temperature and nitrogen supply affect the magnitude and relative age of soil C substrates that are respired from a temperate deciduous forest located at Harvard Forest, MA. A soil warming and nitrogen addition experiment was initiated at the Harvard Forest in 2006. The experiment consists of six replicates of four treatments, control, heated, nitrogen, and heat+nitrogen addition. Soil temperatures in the heated plots are continuously elevated 5 oC above ambient and for the fertilized plots an aqueous solution of NH4NO3 is applied at a rate of 5 g m-2 yr-1. Soil C efflux from these plots was measured (n=24, 6 per treatment) biweekly throughout the year, while 14CO2 was measured (3 samples per treatment) several times during the summer months from 2006-2010. Following treatment, observed rates of annual C efflux increased under heating and nitrogen additions with heating treatments showing the greatest increase in respired C. The difference between control and treatments was greatest during the initial year following treatment; however this difference decreased in the subsequent 3 years of measurement. The plots designated for heating had a higher 14C signature from CO2 efflux prior to the heating (presumably due to spatial heterogeneity). However, because of the high spatial heterogeneity in measured 14C among treatments, no significant difference among treatments was observed from 2006 through 2010. Long term datasets (1995 through 2010) of soil C stocks, radiocarbon content, and CO2 efflux were used to parameterize the ForCent model for Harvard forest. The model was then run with the same treatment parameters as the field experiment for comparison of soil C efflux and 14C. Model results show increased annual C efflux for heated, nitrogen and nitrogen+heat plots with the largest increase in respired C from heated treatments. However there was little difference in simulated 14C respired from any treatment plots. While heating speeds up decomposition of all soil C pools in the model, the absolute amount of increased decomposition from the older pools (with higher 14C) was not large enough to make a difference in 14C composition of respired C, even as the more labile pool with lower 14C was gradually depleted. These results demonstrate that experiments conducted over several years do not provide great insight into the dynamics of slowly cycling soil C.

CO2 flux from Javanese mud volcanism

NASA Astrophysics Data System (ADS)

Queißer, M.; Burton, M. R.; Arzilli, F.; Chiarugi, A.; Marliyani, G. I.; Anggara, F.; Harijoko, A.

2017-06-01

Studying the quantity and origin of CO2 emitted by back-arc mud volcanoes is critical to correctly model fluid-dynamical, thermodynamical, and geochemical processes that drive their activity and to constrain their role in the global geochemical carbon cycle. We measured CO2 fluxes of the Bledug Kuwu mud volcano on the Kendeng Fold and thrust belt in the back arc of Central Java, Indonesia, using scanning remote sensing absorption spectroscopy. The data show that the expelled gas is rich in CO2 with a volume fraction of at least 16 vol %. A lower limit CO2 flux of 1.4 kg s-1 (117 t d-1) was determined, in line with the CO2 flux from the Javanese mud volcano LUSI. Extrapolating these results to mud volcanism from the whole of Java suggests an order of magnitude total CO2 flux of 3 kt d-1, comparable with the expected back-arc efflux of magmatic CO2. After discussing geochemical, geological, and geophysical evidence we conclude that the source of CO2 observed at Bledug Kuwu is likely a mixture of thermogenic, biogenic, and magmatic CO2, with faulting controlling potential pathways for magmatic fluids. This study further demonstrates the merit of man-portable active remote sensing instruments for probing natural gas releases, enabling bottom-up quantification of CO2 fluxes.

P-Glycoprotein (ABCB1) limits the brain distribution of YQA-14, a novel dopamine D3 receptor antagonist.

PubMed

Liu, Fei; Wang, Xiaoqing; Li, Zheng; Li, Jin; Zhuang, Xiaomei; Zhang, Zhenqing

2015-01-01

YQA-14 is a promising agent for treating addiction to cocaine and opioids. However, previous studies have showed there is marked contrast between the relatively small differences in pharmacological action in vivo and the large differences in their respective receptor binding properties in vitro. We hypothesized that the conflict between the in vivo and in vitro outcomes was attributable to poor brain exposure to YQA-14 caused by drug efflux transporters. To address this issue, we investigated the directional flux of YQA-14 across Caco-2 cells at 37°C or 4°C and the bidirectional transport in the presence and absence of transporter chemical inhibitors. These phenomena were further investigated by an in vivo determination of the brain and blood pharmacokinetics (PK) profile of YQA-14 following intraperitoneal administration with and without inhibitor. The efflux ratio of YQA-14 on Caco-2 cell monolayers was 2.39 and the efflux was temperature-dependent. When co-incubated with GF120918 or LY335979, the efflux of YQA-14 was markedly decreased. However, there was no significant difference in the permeability of YQA-14 when the cells were treated with Ko143. In vivo experiments showed that the brain-to-plasma ratio increased by more than 75-fold and 20-fold with co-administration of GF120918 and LY335979, respectively. Use of Ko143 did not change the brain-to-blood ratio of YQA-14. The results indicate that the brain distribution of YQA-14 was restricted because of active efflux transport at the blood brain barrier. In addition, P-glycoprotein (P-gp) played a dominant role in limiting the distribution of YQA-14 to the brain.

Timing and magnitude of C partitioning through a young loblolly pine ( Pinus taeda L.) stand using 13C labeling and shade treatments

DOE PAGES

Warren, Jeffrey M.; Iversen, Colleen M.; Garten, Jr., Charles T.; ...

2011-12-30

The dynamics of rapid changes in carbon (C) partitioning within forest ecosystems are not well understood, which limits improvement of mechanistic models of C cycling. Our objective was to inform model processes by describing relationships between C partitioning and accessible environmental or physiological measurements, with a special emphasis on short-term C flux through a forest ecosystem. We exposed eight 7-year-old loblolly pine ( Pinus taeda L.) trees to air enriched with 13CO 2 and then implemented adjacent light shade (LS) and heavy shade (HS) treatments in order to manipulate C uptake and flux. The impacts of shading on photosynthesis, plantmore » water potential, sap flow, basal area growth, root growth, and soil CO 2 efflux rate (CER) were assessed for each tree over a three-week period. The progression of the 13C label was concurrently tracked from the atmosphere through foliage, phloem, roots, and surface soil CO 2 efflux. The HS treatment significantly reduced C uptake, sap flow, stem growth and fine root standing crop, and resulted in greater residual soil water content to 1 m depth. Sap flow was strongly correlated with CER on the previous day, but not the current day, with no apparent treatment effect on the relationship. Although there were apparent reductions in new C flux belowground, the heavy shade treatment did not noticeably reduce the magnitude of belowground autotrophic and heterotrophic respiration based on surface soil CO 2 efflux rate (CER), which was overwhelmingly driven by soil temperature and moisture. The 13C label was immediately detected in foliage on label day (half-life = 0.5 d), progressed through phloem by day 2 (half-life = 4.7 d), roots by day 2-4, and subsequently was evident as respiratory release from soil which peaked between days 3-6. The δ 13C of soil CO 2 efflux was strongly correlated with phloem 13C on the previous day, or two days earlier. While the 13C label was readily tracked through the ecosystem, the fate of root C through respiratory, mycorrhizal or exudative release pathways were not assessed. Lastly, these data detail the timing and relative magnitude of C flux through various components of a young pine stand in relation to environmental conditions.« less

Microbial responses and nitrous oxide emissions during wetting and drying of organically and conventionally managed soil under tomatoes

USGS Publications Warehouse

Burger, M.; Jackson, L.E.; Lundquist, E.J.; Louie, D.T.; Miller, R.L.; Rolston, D.E.; Scow, K.M.

2005-01-01

The types and amounts of carbon (C) and nitrogen (N) inputs, as well as irrigation management are likely to influence gaseous emissions and microbial ecology of agricultural soil. Carbon dioxide (CO2) and nitrous oxide (N2O) efflux, with and without acetylene inhibition, inorganic N, and microbial biomass C were measured after irrigation or simulated rainfall in two agricultural fields under tomatoes (Lycopersicon esculentum). The two fields, located in the California Central Valley, had either a history of high organic matter (OM) inputs ("organic" management) or one of low OM and inorganic fertilizer inputs ("conventional" management). In microcosms, where short-term microbial responses to wetting and drying were studied, the highest CO2 efflux took place at about 60% water-filled pore space (WFPS). At this moisture level, phospholipid fatty acids (PLFA) indicative of microbial nutrient availability were elevated and a PLFA stress indicator was depressed, suggesting peak microbial activity. The highest N 2O efflux in the organically managed soil (0.94 mg N2O-N m-2 h-1) occurred after manure and legume cover crop incorporation, and in the conventionally managed soil (2.12 mg N2O-N m-2 h-1) after inorganic N fertilizer inputs. Elevated N2O emissions occurred at a WFPS >60% and lasted <2 days after wetting, probably because the top layer (0-150 mm) of this silt loam soil dried quickly. Therefore, in these cropping systems, irrigation management might control the duration of elevated N2O efflux, even when C and inorganic N availability are high, whereas inorganic N concentrations should be kept low during times when soil moisture cannot be controlled.

Separation of soil respiration: a site-specific comparison of partition methods

NASA Astrophysics Data System (ADS)

Comeau, Louis-Pierre; Lai, Derrick Y. F.; Jinglan Cui, Jane; Farmer, Jenny

2018-06-01

Without accurate data on soil heterotrophic respiration (Rh), assessments of soil carbon (C) sequestration rate and C balance are challenging to produce. Accordingly, it is essential to determine the contribution of the different sources of the total soil CO2 efflux (Rs) in different ecosystems, but to date, there are still many uncertainties and unknowns regarding the soil respiration partitioning procedures currently available. This study compared the suitability and relative accuracy of five different Rs partitioning methods in a subtropical forest: (1) regression between root biomass and CO2 efflux, (2) lab incubations with minimally disturbed soil microcosm cores, (3) root exclusion bags with hand-sorted roots, (4) root exclusion bags with intact soil blocks and (5) soil δ13C-CO2 natural abundance. The relationship between Rh and soil moisture and temperature was also investigated. A qualitative evaluation table of the partition methods with five performance parameters was produced. The Rs was measured weekly from 3 February to 19 April 2017 and found to average 6.1 ± 0.3 Mg C ha-1 yr-1. During this period, the Rh measured with the in situ mesh bags with intact soil blocks and hand-sorted roots was estimated to contribute 49 ± 7 and 79 ± 3 % of Rs, respectively. The Rh percentages estimated with the root biomass regression, microcosm incubation and δ13C-CO2 natural abundance were 54 ± 41, 8-17 and 61 ± 39 %, respectively. Overall, no systematically superior or inferior Rs partition method was found. The paper discusses the strengths and weaknesses of each technique with the conclusion that combining two or more methods optimizes Rh assessment reliability.

LBA-ECO TG-07 Soil CO2 Flux by Automated Chamber, Para, Brazil: 2001-2003

Treesearch

R.K. Varner; M.M. Keller

2009-01-01

Measurements of the soil-atmosphere flux of CO2 were made at the km 67 flux tower site in the Tapajos National Forest, Santarem, Para, Brazil. Eight chambers were set up to measure trace gas exchange between the soil and atmosphere about 5 times a day (during daylight and night) at this undisturbed forest site from April 2001 to April 2003. CO2 soil efflux data are...

Measurement and interpretation of the oxygen isotope composition of carbon dioxide respired by leaves in the dark.

PubMed

Cernusak, Lucas A; Farquhar, Graham D; Wong, S Chin; Stuart-Williams, Hilary

2004-10-01

We measured the oxygen isotope composition (delta(18)O) of CO(2) respired by Ricinus communis leaves in the dark. Experiments were conducted at low CO(2) partial pressure and at normal atmospheric CO(2) partial pressure. Across both experiments, the delta(18)O of dark-respired CO(2) (delta(R)) ranged from 44 per thousand to 324 per thousand (Vienna Standard Mean Ocean Water scale). This seemingly implausible range of values reflects the large flux of CO(2) that diffuses into leaves, equilibrates with leaf water via the catalytic activity of carbonic anhydrase, then diffuses out of the leaf, leaving the net CO(2) efflux rate unaltered. The impact of this process on delta(R) is modulated by the delta(18)O difference between CO(2) inside the leaf and in the air, and by variation in the CO(2) partial pressure inside the leaf relative to that in the air. We developed theoretical equations to calculate delta(18)O of CO(2) in leaf chloroplasts (delta(c)), the assumed location of carbonic anhydrase activity, during dark respiration. Their application led to sensible estimates of delta(c), suggesting that the theory adequately accounted for the labeling of CO(2) by leaf water in excess of that expected from the net CO(2) efflux. The delta(c) values were strongly correlated with delta(18)O of water at the evaporative sites within leaves. We estimated that approximately 80% of CO(2) in chloroplasts had completely exchanged oxygen atoms with chloroplast water during dark respiration, whereas approximately 100% had exchanged during photosynthesis. Incorporation of the delta(18)O of leaf dark respiration into ecosystem and global scale models of C(18)OO dynamics could affect model outputs and their interpretation.

Using Strontium Isotopes in Arid Agricultural Soils to Determine a Sink or Source of CO2

NASA Astrophysics Data System (ADS)

Ortiz, A. C.; Jin, L.

2014-12-01

Arid and semi-arid regions of the world are predicted to continue to expand through land degradation and prolonged drought events. Agricultural practices in these drylands degrade soils through elevated salinity, sodicity and alkalinity. Indeed, flood irrigation loads salts onto the soils including carbonate minerals in the form of calcite. Alfalfa and Pecan are salt tolerant and commonly grown in the arid El Paso region, but need irrigation using Rio Grande water with little to no contribution from local ground waters. We hypothesize that the irrigation is loading extra Ca and bicarbonate to soils and anthropogenically enhancing the precipitation of carbonates. We intend to monitor soil CO2 efflux after irrigation, characterize soil minerals, and combine them to isotopic data of soil, irrigation, and drainage waters to link the sources of Ca and C, kinetics of calcite precipitation, to irrigation events. This will include strontium isotopic analysis to determine the source of calcium in the agricultural fields, U-disequilibrium isotopes to estimate the carbonate ages, and CO2 efflux to monitor atmosphere-soil exchange. Carbon dioxide emissions are expected to change during flood irrigation when soils are saturated. After irrigation events, evaporative effects increase Ca and dissolved inorganic carbon concentration in soil waters leading to precipitation of calcite and thus elevated CO2efflux. Preliminary measurements in the pecan field show a marginally significant difference in CO2 fluxes before and after irrigation (p=0.07, t-test). Carbon dioxide emissions are lower during moist conditions (0.6 g m-2hr-1 CO2) than those in dry conditions (1.0 g m-2hr-1 CO2). Future C isotope data are needed to identify the source of extra CO2, biogenic or calcite-precipitation related. A water leachable extraction of alfalfa soils shows 87Sr/86Sr ratios ranged from 0.7101 to 0.7103, indicating Rio Grande river as a dominant calcium source. Further Sr isotopic analysis of sequential extractions from both alfalfa soils (for calcite fraction), pore waters, irrigation waters, and drainage waters will allow us to quantitatively evaluate the source of calcium in calcite therefore, defining if anthropogenic sources of calcium lead to enhanced CO2 production in agricultural fields.

Eighteen years of geochemical monitoring at the oceanic active volcanic island of El Hierro (Canary Islands, Spain)

NASA Astrophysics Data System (ADS)

Asensio-Ramos, María; Alonso, Mar; Sharp, Emerson; Woods, Hannah; Barrancos, José; Pérez, Nemesio M.

2016-04-01

We report herein the latest results of a diffuse CO2 efflux survey at El Hierro volcanic system carried out during the summer period of 2015 to constrain the total CO2 output from the studied area a during post-eruptive period. El Hierro Island (278 km2) is the youngest and the SW-most of the Canary Islands. On July 16, 2011, a seismic-volcanic crisis started with the occurrence of more than 11,900 seismic events and significant deformation along the island. On October 10, 2011, the dominant character of seismicity changed dramatically from discrete earthquakes to continuous tremor, a clear indication that magma was rapidly approaching the surface immediately before the onset of the eruption, October 12. Eruption was declared over on 5 March, 2012. In order to monitor the volcanic activity of El Hierro Island, from 1998 to 2015 diffuse CO2 emission studies have been performed at El Hierro volcanic system in a yearly basis (˜600 observation sites) according to the accumulation chamber method. Spatial distribution maps were constructed following the sequential Gaussian simulation (sGs) procedure. To quantify the total CO2 emission from the studied area, 100 simulations for each survey have been performed. During the eruption period, soil CO2 efflux values range from non-detectable (˜0.5 g m-2 d-1) up to 457 g m-2 d-1, reaching in November 27, 2011, the maximum CO2 output estimated value of all time series, 2,398 t d-1, just before the episodes of maximum degassing observed as vigorous bubbling at the sea surface and an increment in the amplitude of the tremor signal. During the 2015 survey, soil CO2 efflux values ranged from non-detectable up to 41 g m-2 d-1. The spatial distribution of diffuse CO2 emission values seemed to be controlled by the main volcano structural features of the island. The total diffuse CO2 output released to atmosphere was estimated at 575 ± 24 t d-1, value slightly higher that the background CO2 emission estimated at 422 t d-1 (Melián et al., 2014). The above data demonstrate that discrete surveys of diffuse CO2 emission provide important information to optimize the early warning system in volcano monitoring programs and to monitor the evolution of an ongoing volcanic eruption, even though it is a submarine eruption. References: Melián et al., 2014. J. Geophys. Res. DOI: 10.1002/2014JB011013.

Anomalous changes of diffuse CO_{2} emission and seismic activity at Teide volcano, Tenerife, Canary Islands

NASA Astrophysics Data System (ADS)

García-Hernández, Rubén; Melián, Gladys; D'Auria, Luca; Asensio-Ramos, María; Alonso, Mar; Padilla, Germán D.; Rodríguez, Fátima; Padrón, Eleazar; Barrancos, José; García-Merino, Marta; Amonte, Cecilia; Pérez, Aarón; Calvo, David; Hernández, Pedro A.; Pérez, Nemesio M.

2017-04-01

Tenerife (2034 km2) is the largest of the Canary Islands and hosts four main active volcanic edifices: three volcanic rifts and a central volcanic complex, Las Cañadas, which is characterized by the eruption of differentiated magmas. Laying inside Las Cañadas a twin stratovolcanoes system, Pico Viejo and Teide, has been developed. Although there are no visible gas emanations along the volcanic rifts of Tenerife, the existence of a volcanic-hydrothermal system beneath Teide volcano is suggested by the occurrence of a weak fumarolic system, steamy ground and high rates of diffuse CO2 degassing all around the summit cone of Teide. Soil CO2 efflux surveys have been performed at the summit crater of Teide volcano since 1999, to determine the diffuse CO2 emission from the summit crater and to evaluate the temporal variations of CO2 efflux and their relationships with seismic-volcanic activity. Soil CO2 efflux and soil temperature have been always measured at the same 38 observation sites homogeneously distributed within an area of about 6,972 m2 inside the summit crater. Soil CO2 diffuse effluxes were estimated according to the accumulation chamber method by means of a non-dispersive infrared (NDIR) LICOR-820 CO2 analyzer. Historical seismic activity in Tenerife has been characterized by low- to moderate-magnitude events (M <2.5), and most of the earthquake's epicenters have been clustered in an offshore area SE of Tenerife. However, very few earthquakes have occurred in other areas, including Teide volcano. At 12:18 of January 6, 2017, the Canary Seismic Network belonged to the Instituto Volcanológico de Canarias (INVOLCAN) registered an earthquake of M 2.5 located in the vertical of Teide volcano with a depth of 6.6 km. It was the strongest earthquake located inside Cañadas caldera since 2004. Between October 11 and December 13, 2016, a continuous increase on the diffuse CO2 emission was registered, from 21.3 ± 2.0 to 101.7 ± 20.7 t d-1, suggesting the occurrence of future increase in the seismic-volcanic activity. In fact, this precursory signal preceded the occurrence of the 2.5 seismic event and no significant horizontal and vertical displacements were registered by the Canary GPS network belonged to INVOLCAN. This seismic event was probably due to the increase of fluid pressure in the hydrothermal-magmatic system of Tenerife. With the aim of investigate the relationship of the observed temporal variation on diffuse CO2 emission and the seismic event occurred beneath Teide volcano in January 6, 2016, the anomalous peak of diffuse CO2 emission was tested following the Material Failure Forecast Method (FFM). To do so, a Geochemical Window Precursory Signal (GWPS) was selected between October 11 and December 13, 2016. Plotting the inverse of diffuse CO2 emission rate versus time, the interception of the linear fit of the data with the time axis indicates the theoretical moment when seismicity is most likely to occur. Surprisingly, interception of the linear fit occurred for a time window between January 6 and 9, 2017, showing an excellent correlation with the occurrence of the M 2.5 earthquake registered at Teide in January 6, 2017.

Precipitation alters plastic film mulching impacts on soil respiration in an arid area of northwest China

NASA Astrophysics Data System (ADS)

Ming, Guanghui; Hu, Hongchang; Tian, Fuqiang; Peng, Zhenyang; Yang, Pengju; Luo, Yiqi

2018-05-01

Plastic film mulching (PFM) has widely been used around the world to save water and improve crop yield. However, the effect of PFM on soil respiration (Rs) remains unclear and could be further confounded by irrigation and precipitation. To address these topics, controlled experiments were conducted in mulched and non-mulched fields under drip irrigation from 2014 to 2016 in an arid area of the Xinjiang Uygur Autonomous Region, northwest China. The spatio-temporal pattern of soil surface CO2 flux as an index of soil respiration under drip irrigation with PFM was investigated, and the confounded effects of PFM and irrigation/precipitation on soil respiration were explored. The main findings were as follows. (1) Furrows, planting holes, and plastic mulch are three important pathways of soil CO2 emissions in mulched fields, of which the planting hole efflux outweighs that from the furrow, with the largest values of 8.0 and 6.6 µmol m-2 s-1, respectively, and the plastic mulch itself can emit up to 3.6 µmol m-2 s-1 of CO2. (2) The frequent application of water (i.e. through irrigation and precipitation) elevates soil moisture and soil respiration and enhances their variation. The resultant higher variation of soil moisture further alleviates the sensitivity of soil respiration to soil temperature, leading to a weak correlation and lower Q10 values. (3) Soil CO2 effluxes from furrows and ridges in mulched fields outweigh the corresponding values in non-mulched fields in arid areas. However, this outweighing relation attenuates with increasing precipitation. Furthermore, by combining our results with those from the literature, we show that the difference in soil CO2 effluxes between non-mulched and mulched fields presents a linear relation with the amount of precipitation, which results in negative values in arid areas and positive values in humid areas. Therefore, whether PFM increases soil respiration or not depends on the amount of precipitation during the crop-growing season.

Calculating surface ocean pCO2 from biogeochemical Argo floats equipped with pH: An uncertainty analysis

NASA Astrophysics Data System (ADS)

Williams, N. L.; Juranek, L. W.; Feely, R. A.; Johnson, K. S.; Sarmiento, J. L.; Talley, L. D.; Dickson, A. G.; Gray, A. R.; Wanninkhof, R.; Russell, J. L.; Riser, S. C.; Takeshita, Y.

2017-03-01

More than 74 biogeochemical profiling floats that measure water column pH, oxygen, nitrate, fluorescence, and backscattering at 10 day intervals have been deployed throughout the Southern Ocean. Calculating the surface ocean partial pressure of carbon dioxide (pCO2sw) from float pH has uncertainty contributions from the pH sensor, the alkalinity estimate, and carbonate system equilibrium constants, resulting in a relative standard uncertainty in pCO2sw of 2.7% (or 11 µatm at pCO2sw of 400 µatm). The calculated pCO2sw from several floats spanning a range of oceanographic regimes are compared to existing climatologies. In some locations, such as the subantarctic zone, the float data closely match the climatologies, but in the polar Antarctic zone significantly higher pCO2sw are calculated in the wintertime implying a greater air-sea CO2 efflux estimate. Our results based on four representative floats suggest that despite their uncertainty relative to direct measurements, the float data can be used to improve estimates for air-sea carbon flux, as well as to increase knowledge of spatial, seasonal, and interannual variability in this flux.

Hydrodynamic Controls on Carbon Dioxide Efflux from Inland Waters

NASA Astrophysics Data System (ADS)

Long, H. E.; Waldron, S.; Hoey, T.; Newton, J.; Quemin, S.

2013-12-01

Intensive research has been undertaken on carbon dioxide efflux from lakes, estuaries and oceans, but much less attention has been given to rivers and streams, especially lower order streams. River systems are often over-saturated with carbon dioxide and so tend to act as sources of carbon dioxide to the atmosphere. It has been thought that rivers act as pipes carrying this terrestrial carbon to the oceans. However, recent studies have shown that a significant amount of the carbon is reprocessed within the system in a series of transformations and losses. Fluvial evasion of carbon dioxide is now recognised to be a significant component of carbon cycles, however the factors controlling carbon dioxide efflux and its magnitude remain poorly understood and quantified. This research aims to quantify, and better understand the controls on, freshwater carbon dioxide evasion. Data are presented here from field measurements that commenced in Sept 2013 in two contrasting Scottish rivers: the River Kelvin which has a large (335 km.sq) part-urban catchment with predominantly non-peat soils and Drumtee Water, a small (9.6 km.sq) rural catchment of peat soils and agricultural land. Using a floating chamber with the headspace connected to an infrared gas analyser to measure changes in carbon dioxide concentration, efflux rates from 0.22 - 47.4 μmol CO2/m.sq/sec were measured, these close to the middle of the range of previously reported values. At one site on the River Kelvin in May 2013 an influx of -0.61 - -3.53 μmol CO2/m.sq/sec was recorded. Whereas previous research finds carbon dioxide efflux to increase with decreasing river size and a more organic-rich soil catchment, here the controls on carbon dioxide evasion are similar across the contrasting catchments. Carbon dioxide evasion shows seasonality, with maximum fluxes in the summer months being up to twice as high as the winter maxima. Linear regression demonstrates that evasion increases with increased flow velocity, water surface disturbance indicated by Froude number, and turbulent mixing indicated by Reynolds number. Similar relationships with season, flow velocity and turbulence have been reported previously, but there is little known about the mechanisms involved. When comparing spot carbon dioxide efflux measurements to river stage time series data, carbon dioxide efflux is more sensitive to an increase in stage at more turbulent measurement points. Further investigation of the mechanisms will be obtained by measurement of DIC concentration and isotopic composition to assess the controls of carbon source versus degassing, and the analysis of the interactions between hydraulic and seasonal controls and carbon dioxide fluxes extended.

The BpeEF-OprC Efflux Pump Is Responsible for Widespread Trimethoprim Resistance in Clinical and Environmental Burkholderia pseudomallei Isolates

PubMed Central

Podnecky, Nicole L.; Wuthiekanun, Vanaporn; Peacock, Sharon J.

2013-01-01

Trimethoprim-sulfamethoxazole (co-trimoxazole) is the primary drug used for oral eradication therapy of Burkholderia pseudomallei infections (melioidosis). Here, we demonstrate that trimethoprim resistance is widespread in clinical and environmental isolates from northeast Thailand and northern Australia. This resistance was shown to be due to BpeEF-OprC efflux pump expression. No dihydrofolate reductase target mutations were involved, although frequent insertion of ISBma2 was noted within the putative folA transcriptional terminator. All isolates tested remained susceptible to trimethoprim-sulfamethoxazole, suggesting that resistance to trimethoprim alone in these strains probably does not affect the efficacy of co-trimoxazole therapy. PMID:23817379

Carbon dioxide concentration in caves and soils in an alpine setting: implications for speleothem fabrics and their palaeoclimate significance

NASA Astrophysics Data System (ADS)

Borsato, Andrea; Frisia, Silvia; Miorandi, Renza

2015-04-01

Carbon dioxide concentration in soils controls carbonate dissolution, soil CO2 efflux to the atmosphere, and CO2 transfer to the subsurface that lead, ultimately, to speleothem precipitation. Systematic studies on CO2 concentration variability in soil and caves at regional scale are, however, few. Here, the systematic investigation of CO2 concentration in caves and soils in a temperate, Alpine region along a 2,100 m altitudinal range transect, which corresponds to a mean annual temperature (MAT) range of 12°C is presented. Soil pCO2 is controlled by the elevation and MAT and exhibits strong seasonality, which follows surface air temperature with a delay of about a month. The aquifer pCO2, by contrast, is fairly constant throughout the year, and it is primarily influenced by summer soil pCO2. Cave CO2 concentration is a balance between the CO2 influx and CO2 efflux, where the efflux is controlled by the cave ventilation, which is responsible for low pCO2 values recorded in most of the caves with respect to soil levels. Carbon dioxide in the innermost part of the studied caves exhibits a clear seasonal pattern. Thermal convection is the most common mechanism causing higher ventilation and low cave air pCO2 levels during the winter season: this promotes CO2 degassing and higher supersaturation in the drip water and, eventually, higher speleothem growth rates during winter. The combined influence of three parameters - dripwater pCO2, dripwater Ca content, and cave air pCO2 - all related to the infiltration elevation and MAT directly controls calcite supersaturation in dripwater. Four different altitudinal belts are then defined, which reflect temperature-dependent saturation state of dripwaters. These belts broadly correspond to vegetation zones: the lower montane (100 to 800 m asl), the upper montane (800 to 1600 m asl), the subalpine (1600 to 2200 m asl) and the Alpine (above 2200 m asl). Each altitudinal belt is characterised by different calcite fabrics, which can shift upward/downward in elevation as a response to temperature increase/decrease through time. In the lower and upper montane zones the columnar types (compact, open, fascicular optic) are the most common fabrics, with the microcrystalline type most typical of the upper montane zone. The dendritic fabric becomes predominant in the higher upper montane and lower subalpine zones. The higher subalpine to lower alpine zones the only speleothem actually forming is moonmilk. Eventually, the occurrence of "altitudinal" fabrics within the vertical growth axis of a stalagmite is indicative of changes in the MAT through time Therefore, fabric changes in fossil speleothems in temperate climate settings can be potentially used to reconstruct regional MAT changes in the past.

Seasonal reversal of temperature-moisture response of net carbon exchange of biocrusted soils in a cool desert ecosystem.

NASA Astrophysics Data System (ADS)

Tucker, C.; Reed, S.; Howell, A.

2017-12-01

Carbon cycling associated with biological soil crusts, which occur in interspaces between vascular plants in drylands globally, may be an important part of the coupled climate-carbon cycle of the Earth system. A major challenge to understanding CO2 fluxes in these systems is that much of the biotic and biogeochemical activity occurs in the upper few mm of the soil surface layer (i.e., the `mantle of fertility'), which exhibits highly dynamic and difficult to measure temperature and moisture fluctuations. Here, we report data collected in a cool desert ecosystem over one year using a multi-sensor approach to simultaneously measuring temperature and moisture of the biocrust surface layer (0-2 mm), and the deeper soil profile (5-20 cm), concurrent with automated measurement of surface soil CO2 effluxes. Our results illuminate robust relationships between microclimate and field CO2 pulses that have previously been difficult to detect and explain. The temperature of the biocrust surface layer was highly variable, ranging from minimum of -9 °C in winter to maximum of 77 °C in summer with a maximum diurnal range of 61 °C. Temperature cycles were muted deeper in the soil profile. During summer, biocrust and soils were usually hot and dry and CO2 fluxes were tightly coupled to pulse wetting events experienced at the biocrust surface, which consistently resulted in net CO2 efflux (i.e., respiration). In contrast, during the winter, biocrust and soils were usually cold and moist, and there was sustained net CO2 uptake via photosynthesis by biocrust organisms, although during cold dry periods CO2 fluxes were minimal. During the milder spring and fall seasons, short wetting events drove CO2 loss, while sustained wetting events resulted in net CO2 uptake. Thus, the upper and lower bounds of net CO2 exchange at a point in time were functions of the seasonal temperature regime, while the actual flux within those bounds was determined by the magnitude and duration of biocrust and soil wetting events. These patterns reflect both the low temperature sensitivity and slow initiation in response to wetting of photosynthesis compared to respiration by biocrust organisms. Our study highlights the importance of cool and cold periods for C uptake in biocrusted soils of the Colorado Plateau.

Capturing and Processing Soil GHG Fluxes Using the LI-COR LI-8100A

NASA Astrophysics Data System (ADS)

Xu, Liukang; McDermitt, Dayle; Hupp, Jason; Johnson, Mark; Madsen, Rod

2015-04-01

The LI-COR LI-8100A Automated Soil CO2 Flux System is designed to measure soil CO2 efflux using automated chambers and a non-steady state measurement protocol. While CO2 is an important gas in many contexts, it is not the only gas of interest for many research applications. With some simple plumbing modifications, many third party analyzers capable of measuring other trace gases, e.g. N2O, CH4, or 13CO2 etc., can be interfaced with the LI-8100A System, and LI-COR's data processing software (SoilFluxPro™) can be used to compute fluxes for these additional gases. In this paper we describe considerations for selecting an appropriate third party analyzer to interface with the system, how to integrate data into the system, and the procedure used to compute fluxes of additional gases in SoilFluxPro™. A case study is presented to demonstrate methane flux measurements using an Ultra-Portable Greenhouse Gas Analyzer (Ultra-Portable GGA, model 915-0011), manufactured by Los Gatos Research and integrated into the LI-8100A System. Laboratory and field test results show that the soil CO2 efflux based on the time series of CO2 data measured either with the LI-8100A System or with the Ultra-Portable GGA are essentially the same. This suggests that soil GHG fluxes measured with both systems are reliable.

Potential role of pectate lyase and Ca(2+) in the increase in strawberry fruit firmness induced by short-term treatment with high-pressure CO2.

PubMed

Wang, Mao Hua; Kim, Jin Gook; Ahn, Sun Eun; Lee, Ah Youn; Bae, Tae Min; Kim, Deu Re; Hwang, Yong Soo

2014-04-01

Postharvest treatment with high-pressure CO2 helps to control decay and increase firmness in strawberries. Increases in firmness occurred through modification of calcium binding to cell wall. However, the mechanism(s) involved in Ca(2+) migration to pectic polymers and other physiological events associated with the maintenance of increased firmness are not clearly understood. The focus of this study was to find potential mechanism(s) that are associated with calcium movement, increases in firmness, or maintenance of firmness in strawberry fruit after high-pressure CO2 treatment. An increase in firmness was induced by high-pressure CO2 treatment, but not by high-pressure N2 treatment. This indicates that CO2 stimulates a change in firmness. The increase in firmness induced by high-pressure CO2 seems to involve calcium efflux. Using membrane Ca(2+) -dependent ATPase inhibitors sodium vanadate (250 μM) and erythrosin B (100 μM) delayed both the increase in firmness and calcium binding to wall polymers. Exogenous application of CaCl2 (10 mM) enhanced the firmness increase of fruit slices only when they were exposed to high-pressure CO2 . The activity of pectate lyase was downregulated by CO2 treatment, but β-galactosidase activity was not affected. The increase in strawberry firmness induced by high-pressure CO2 treatment primarily involves the efflux of calcium ions and their binding to wall polymers. These physiological changes are not induced by an anaerobic environment. The downregulation of wall-modifying enzymes, such as pectate lyase, appeared to contribute to the maintenance of firmness that was induced by high-pressure CO2 treatment. © 2014 Institute of Food Technologists®

An Arg-Gly-Asp peptide stimulates Ca2+ efflux from osteoclast precursors through a novel mechanism

NASA Technical Reports Server (NTRS)

Yamakawa, K.; Duncan, R.; Hruska, K. A.

1994-01-01

We examined the effect of a peptide containing the Arg-Gly-Asp (RGD) sequence on 45Ca2+ efflux from osteoclast precursors. 45Ca(2+)-loaded osteoclast precursors were treated with GRGDSP (170 microM) for 10 min after 30 min of basal perfusion with a bicarbonate-containing buffer. GRGDSP significantly increased fractional efflux of Ca2+ from treated cells compared with vehicle-treated cells (P < 0.01) or cells treated with up to 200 micrograms/ml of a control peptide containing GRGESP. The effect of RGD was sustained for 15 min after the peptide was removed from the perfusate, but control levels of Ca2+ efflux returned by 1 h. The Ca2+ efflux effect of GRGDSP was most likely due to activation of the plasma membrane Ca(2+)-adenosinetriphosphatase (Ca(2+)-ATPase) pump, as indicated by its inhibition with vanadate and a calmodulin antagonist, N-(4-aminobutyl)-5-chloro-2-naphthalenesulfonamide, and the absence of an effect of Na+/Ca2+ exchange inhibition. An inhibitor of cyclic nucleotide-dependent protein kinases, N-[2-(methylamino)ethyl]-5-isoquinoline-sulfonamide (0.1 mM), failed to inhibit GRGDSP-stimulated Ca2+ efflux. However, genistein and herbimycin A, inhibitors of protein-tyrosine kinases, blocked Ca2+ efflux stimulated by GRGDSP. The results indicate that RGD sequences of matrix proteins may stimulate Ca2+ efflux from osteoclasts through activation of protein-tyrosine kinases and suggest that GRGDSP-stimulated Ca2+ efflux is mediated via the plasma membrane Ca(2+)-ATPase.

Photosynthetic refixation varies along the stem and reduces CO2 efflux in mature boreal Pinus sylvestris trees.

PubMed

Tarvainen, Lasse; Wallin, Göran; Lim, Hyungwoo; Linder, Sune; Oren, Ram; Ottosson Löfvenius, Mikaell; Räntfors, Mats; Tor-Ngern, Pantana; Marshall, John

2018-04-01

Trees are able to reduce their carbon (C) losses by refixing some of the CO2 diffusing out of their stems through corticular photosynthesis. Previous studies have shown that under ideal conditions the outflowing CO2 can be completely assimilated in metabolically active, young stem and branch tissues. Fewer studies have, however, been carried out on the older stem sections of large trees and, accordingly, the importance of refixation is still unclear under natural environmental conditions. We investigated the spatial and temporal variation in refixation in ~90-year-old boreal Scots pine (Pinus sylvestris L.) trees by utilizing month-long continuous measurements of stem CO2 efflux (Ec) made at four heights along the bole. Refixation rates were found to vary considerably along the bole, leading to a 28% reduction in long-term Ec in the upper stem compared with a negligible reduction at breast height. This vertical pattern correlated with variation in light availability, bark chlorophyll content and bark type. Analysis of the vertical and diurnal patterns in Ec further suggested that the influence of sap flow on the observed daytime reduction in Ec was small. The areal rates of corticular photosynthesis were much lower than previous estimates of photosynthetic rates per unit leaf area from the same trees, implying that the impact of refixation on tree-scale C uptake was small. However, upscaling of refixation indicated that 23-27% of the potential Ec was refixed by the bole and the branches, thereby significantly reducing the woody tissue C losses. Thus, our results suggest that refixation needs to be considered when evaluating the aboveground C cycling of mature P. sylvestris stands and that breast-height estimates should not be extrapolated to the whole tree.

Effects of season and nitrogen supply on the partitioning of recently fixed carbon in understory vegetation using a 13CO2 pulse labeling technique

NASA Astrophysics Data System (ADS)

Hasselquist, Niles; Metcalfe, Daniel; Högberg, Peter

2013-04-01

Vegetation research in boreal forests has traditionally been focused on trees, with little attention given to understory vegetation. However, understory vegetation has been identified as a key driver for the functioning of boreal forests and may play an important role in the amount of carbon (C) that is entering and leaving these forested ecosystems. We conducted a large-scale 13C pulse labeling experiment to better understand how recently fixed C is allocated in the understory vegetation characteristic of boreal forests. We used transparent plastic chambers to pulse label the understory vegetation with enriched 13CO2 in the early (June) and late (August) growing seasons. This study was also replicated across a nitrogen (N) fertilization treatment to better understand the effects of N availability on C allocation patterns. We present data on the amount of 13C label found in different components of the understory vegetation (i.e. leaves, stems, lichens, mosses, rhizomes and fine roots) as well as CO2 efflux. Additionally, we provide estimates of C residence time (MRT) among the different components and examine how MRT of C is affected by seasonality and N availability. Seasonality had a large effect on how recently fixed C is allocated in understory vegetation, whereas N fertilization influenced the MRT of C in the different components of ericaceous vegetation. Moreover, there was a general trend that N additions increased the amount of 13C in CO2 efflux compared to the amount of 13C in biomass, suggesting that N fertilization may lead to an increase in the utilization of recently fixed C, whereas N-limitation promotes the storage of recently fixed C.

Kinetic determinations of trace element bioaccumulation in the mussel Mytilus edulis

USGS Publications Warehouse

Wang, W.-X.; Fisher, N.S.; Luoma, S.N.

1996-01-01

Laboratory experiments employing radiotracer methodology were conducted to determine the assimilation efficiencies from ingested natural seston, the influx rates from the dissolved phase and the efflux rates of 6 trace elements (Ag, Am, Cd, Co, Se and Zn) in the mussel Mytilus edulis. A kinetic model was then employed to predict trace element concentration in mussel tissues in 2 locations for which mussel and environmental data are well described: South San Francisco Bay (California, USA) and Long Island Sound (New York, USA). Assimilation efficiencies from natural seston ranged from 5 to 18% for Ag, 0.6 to 1% for Am, 8 to 20% for Cd, 12 to 16% for Co, 28 to 34% for Se, and 32 to 41% for Zn. Differences in chlorophyll a concentration in ingested natural seston did not have significant impact on the assimilation of Am, Co, Se and Zn. The influx rate of elements from the dissolved phase increased with the dissolved concentration, conforming to Freundlich adsorption isotherms. The calculated dissolved uptake rate constant was greatest for Ag, followed by Zn > Am = Cd > Co > Se. The estimated absorption efficiency from the dissolved phase was 1.53% for Ag, 0.34% for Am, 0.31% for Cd, 0.11% for Co, 0.03% for Se and 0.89% for Zn. Salinity had an inverse effect on the influx rate from the dissolved phase and dissolved organic carbon concentration had no significant effect on trace element uptake. The calculated efflux rate constants for all elements ranged from 1.0 to 3.0% d-1. The route of trace element uptake (food vs dissolved) and the duration of exposure to dissolved trace elements (12 h vs 6 d) did not significantly influence trace element efflux rates. A model which used the experimentally determined influx and efflux rates for each of the trace elements, following exposure from ingested food and from water, predicted concentrations of Ag, Cd, Se and Zn in mussels that were directly comparable to actual tissue concentrations independently measured in the 2 reference sites in national monitoring programs. Sensitivity analysis indicated that the total suspended solids load, which can affect mussel feeding activity, assimilation, and trace element concentration in the dissolved and particulate phases, can significantly influence metal bioaccumulation for particle-reactive elements such as Ag and Am. For all metals, concentrations in mussels are proportionately related to total metal load in the water column and their assimilation efficiency from ingested particles. Further, the model predicted that over 96% of Se in mussels is obtained from ingested food, under conditions typical of coastal waters. For Ag, Am, Cd, Co and Zn, the relative contribution from the dissolved phase decreases significantly with increasing trace element partition coefficients for suspended particles and the assimilation efficiency in mussels of ingested trace elements; values range between 33 and 67% for Ag, 5 and 17% for Am, 47 and 82% for Cd, 4 and 30% for Co, and 17 and 51% for Zn.

Effects of lisdexamfetamine alone and in combination with s-citalopram on acetylcholine and histamine efflux in the rat pre-frontal cortex and ventral hippocampus.

PubMed

Hutson, Peter H; Heins, Mariette S; Folgering, Joost H A

2015-08-01

Attention deficit hyperactivity disorder (ADHD) is a neurodevelopmental disorder characterized by poor attention, impulse control and hyperactivity. A significant proportion of ADHD patients are also co-morbid for other psychiatric problems including mood disorders and these patients may be managed with a combination of psychostimulants and anti-depressants. While it is generally accepted that enhanced catecholamine signalling via the action of psychostimulants is likely responsible for the cognitive improvement in ADHD, other neurotransmitters including acetylcholine and histamine may be involved. In the present study, we have examined the effect of lisdexamfetamine dimesylate (LDX), an amphetamine pro-drug that is approved for the treatment of ADHD on acetylcholine and histamine efflux in pre-frontal cortex and hippocampus alone and in combination with the anti-depressant s-citalopram. LDX increased cortical acetylcholine efflux, an effect that was not significantly altered by co-administration of s-citalopram. Cortical and hippocampal histamine were markedly increased by LDX, an effect that was attenuated in the hippocampus but not in pre-frontal cortex when co-administered with s-citalopram. Taken together, these results suggest that efflux of acetylcholine and histamine may be involved in the therapeutic effects of LDX and are differentially influenced by the co-administration of s-citalopram. Attention deficit hyperactivity disorder (ADHD) is characterized by poor attention, impulse control and hyperactivity. Some ADHD patients are also co-morbid for mood disorders and may be managed with psychostimulants (e.g. lisdexamfetamine, LDX) and anti-depressants (e.g. s-citalopram). LDX increased the efflux of acetylcholine and histamine, neurotransmitters involved in cognitive function, which were differentially influenced when co-administered with s-citalopram. Acetylcholine and histamine may be involved in the therapeutic effects of LDX and are differentially affected by the co-administration of s-citalopram. © 2015 International Society for Neurochemistry.

Soil CO2 Efflux Trends Following the Thinning of a 22-Year-Old Loblolly Pine Plantation on the Piedmont of Virginia

Treesearch

M.F. Selig; J.R. Seiler

2004-01-01

Due to the growing concern over increasing atmospheric CO2 concentrations, it has become increasingly important to understand the influence forest practices have on the global carbon cycle. The thinning of loblolly pine (Pinus taeda) plantations in the Southeastern United States is a common silvicultural practice and has great...

ATP binding cassette G1-dependent cholesterol efflux during inflammation.

PubMed

de Beer, Maria C; Ji, Ailing; Jahangiri, Anisa; Vaughan, Ashley M; de Beer, Frederick C; van der Westhuyzen, Deneys R; Webb, Nancy R

2011-02-01

ATP binding cassette transporter G1 (ABCG1) mediates the transport of cellular cholesterol to HDL, and it plays a key role in maintaining macrophage cholesterol homeostasis. During inflammation, HDL undergoes substantial remodeling, acquiring lipid changes and serum amyloid A (SAA) as a major apolipoprotein. In the current study, we investigated whether remodeling of HDL that occurs during acute inflammation impacts ABCG1-dependent efflux. Our data indicate that lipid free SAA acts similarly to apolipoprotein A-I (apoA-I) in mediating sequential efflux from ABCA1 and ABCG1. Compared with normal mouse HDL, acute phase (AP) mouse HDL containing SAA exhibited a modest but significant 17% increase in ABCG1-dependent efflux. Interestingly, AP HDL isolated from mice lacking SAA (SAAKO mice) was even more effective in promoting ABCG1 efflux. Hydrolysis with Group IIA secretory phospholipase A(2) (sPLA(2)-IIA) significantly reduced the ability of AP HDL from SAAKO mice to serve as a substrate for ABCG1-mediated cholesterol transfer, indicating that phospholipid (PL) enrichment, and not the presence of SAA, is responsible for alterations in efflux. AP human HDL, which is not PL-enriched, was somewhat less effective in mediating ABCG1-dependent efflux compared with normal human HDL. Our data indicate that inflammatory remodeling of HDL impacts ABCG1-dependent efflux independent of SAA.

Methane emission to the atmosphere from landfills in the Canary Islands

NASA Astrophysics Data System (ADS)

Hernández, Pedro A.; Asensio-Ramos, María; Rodríguez, Fátima; Alonso, Mar; García-Merino, Marta; Amonte, Cecilia; Melián, Gladys V.; Barrancos, José; Rodríguez-Delgado, Miguel A.; Hernández-Abad, Marta; Pérez, Erica; Alonso, Monica; Tassi, Franco; Raco, Brunella; Pérez, Nemesio M.

2017-04-01

Methane (CH4) is one of the most powerful greenhouse gases, and is increasing in the atmosphere by 0.6% each year (Intergovernmental Panel on Climate Change, IPCC, 2013). This gas is produced in landfills in large quantities following the anaerobic degradation of organic matter. The IPCC has estimated that more than 10% of the total anthropogenic emissions of CH4 are originated in landfills. Even after years of being no operative (closed), a significant amount of landfill gas could be released to the atmosphere through its surface as diffuse or fugitive degassing. Many landfills currently report their CH4 emissions to the atmosphere using model-based methods, which are based on the rate of production of CH4, the oxidation rate of CH4 and the amount of CH4 recovered (Bingemer and Crutzen, 1987). This approach often involves large uncertainties due to inaccuracies of input data and many assumptions in the estimation. In fact, the estimated CH4 emissions from landfills in the Canary Islands published by the Spanish National Emission and Pollutant Sources Registration (PRTR-Spain) seem to be overestimated due to the use of protocols and analytical methodologies based on mathematical models. For this reason, direct measurements to estimate CH4 emissions in landfills are essential to reduce this uncertainty. In order to estimate the CH4 emissions to the atmosphere from landfills in the Canary Islands 23 surveys have been performed since 1999. Each survey implies hundreds of CO2and CH4 efflux measurements covering the landfill surface area. Surface landfill CO2 efflux measurements were carried out at each sampling site by means of a portable non-dispersive infrared spectrophotometer (NDIR) model LICOR Li800 following the accumulation chamber method. Samples of landfill gases were taken in the gas accumulated in the chamber and CO2 and CH4 were analyzed using a double channel VARIAN 4900 micro-GC. The CH4 efflux measurent was computed combining CO2 efflux and CH4/CO2 ratio. To quantify the the diffuse or fugitive CO2 and CH4 emission, gas efflux contour maps were constructed using sequential Gaussian simulation (sGs) as interpolation method. Considering that (a) there are 5 controlled landfills in the Canary Islands, (b) the average area of the 23 studied cells is 0.17 km2 and (c) the mean value of the CH4 emission estimated for the studied cells range between 6.9 and 8.1 kt km-2 y-1, the estimated CH4 emission to the atmosphere from landfills in the Canary Islands showed a range of 7.0 - 7.8 kt y-1. On the contrary and for the same period of time, the PRTR-Spain estimates CH4 emission in the order of 10.3 - 14.9 kt y-1, nearly two times our estimated value. This result demonstrates the need to perform direct measurements to estimate the surface fugitive emission of CH4 from landfills. Bingemer, H. G., and P. J. Crutzen (1987). The production of methane from solid wastes, J. Geophys. Res. 92, 2182-2187

Comparative effect of lurasidone and blonanserin on cortical glutamate, dopamine, and acetylcholine efflux: role of relative serotonin (5-HT)2A and DA D2 antagonism and 5-HT1A partial agonism.

PubMed

Huang, Mei; Panos, John J; Kwon, Sunoh; Oyamada, Yoshihiro; Rajagopal, Lakshmi; Meltzer, Herbert Y

2014-03-01

Atypical antipsychotic drugs (AAPDs) have been suggested to be more effective in improving cognitive impairment in schizophrenia than typical APDs, a conclusion supported by differences in receptor affinities and neurotransmitter efflux in the cortex and the hippocampus. More potent serotonin (5-HT)2A than dopamine (DA) D2 receptors antagonism, and direct or indirect 5-HT1A agonism, characterize almost all AAPDs. Blonanserin, an AAPD, has slightly greater affinity for D2 than 5-HT2A receptors. Using microdialysis and ultra performance liquid chromatography-mass spectrometry/mass spectrometry, we compared the abilities of the typical APD, haloperidol, three AAPDs, blonanserin, lurasidone, and olanzapine, and a selective 5-HT1A partial agonist, tandospirone, and all, except haloperidol, were found to ameliorate the cognitive deficits produced by the N-methyl-d-aspartate antagonist, phencyclidine, altering the efflux of neurotransmitters and metabolites in the rat cortex and nucleus accumbens. Blonanserin, lurasidone, olanzapine, and tandospirone, but not haloperidol, increased the efflux of cortical DA and its metabolites, homovanillic acid and 3,4-dihydroxyphenylacetic acid. Olanzapine and lurasidone increased the efflux of acetylcholine; lurasidone increased glutamate as well. None of the compounds significantly altered the efflux of 5-HT or its metabolite, 5-hydroxyindole acetic acid, or GABA, serine, and glycine. The ability to increase cortical DA efflux was the only shared effect of the compounds which ameliorates the deficit in cognition in rodents following phencyclidine. © 2013 International Society for Neurochemistry.

Stem compression reversibly reduces phloem transport in Pinus sylvestris trees.

PubMed

Henriksson, Nils; Tarvainen, Lasse; Lim, Hyungwoo; Tor-Ngern, Pantana; Palmroth, Sari; Oren, Ram; Marshall, John; Näsholm, Torgny

2015-10-01

Manipulating tree belowground carbon (C) transport enables investigation of the ecological and physiological roles of tree roots and their associated mycorrhizal fungi, as well as a range of other soil organisms and processes. Girdling remains the most reliable method for manipulating this flux and it has been used in numerous studies. However, girdling is destructive and irreversible. Belowground C transport is mediated by phloem tissue, pressurized through the high osmotic potential resulting from its high content of soluble sugars. We speculated that phloem transport may be reversibly blocked through the application of an external pressure on tree stems. Thus, we here introduce a technique based on compression of the phloem, which interrupts belowground flow of assimilates, but allows trees to recover when the external pressure is removed. Metal clamps were wrapped around the stems and tightened to achieve a pressure theoretically sufficient to collapse the phloem tissue, thereby aiming to block transport. The compression's performance was tested in two field experiments: a (13)C canopy labelling study conducted on small Scots pine (Pinus sylvestris L.) trees [2-3 m tall, 3-7 cm diameter at breast height (DBH)] and a larger study involving mature pines (∼15 m tall, 15-25 cm DBH) where stem respiration, phloem and root carbohydrate contents, and soil CO2 efflux were measured. The compression's effectiveness was demonstrated by the successful blockage of (13)C transport. Stem compression doubled stem respiration above treatment, reduced soil CO2 efflux by 34% and reduced phloem sucrose content by 50% compared with control trees. Stem respiration and soil CO2 efflux returned to normal within 3 weeks after pressure release, and (13)C labelling revealed recovery of phloem function the following year. Thus, we show that belowground phloem C transport can be reduced by compression, and we also demonstrate that trees recover after treatment, resuming C transport in the phloem. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Effects of temperature on microbial transformation of organic matter - comparing stories told by purified enzyme assays, chemostat experiments and soils

NASA Astrophysics Data System (ADS)

Lehmeier, C.; Min, K.; Good, H. J.; Billings, S. A.

2015-12-01

Temperature (T) is a major determinant of microbial decomposition of soil organic matter (SOM). Quantifying T responses of microbial C fluxes is crucial to improve predictions of SOM dynamics and atmospheric CO2 concentrations, but interpretation of experimental data is complicated by many properties inherent to soils. Comparing such data with complementary, reductionist experiments can help to identify basic mechanisms and interpret soil measurements. We quantified T effects on activity levels (i.e., rates of substrate cleavage) of microbial extracellular enzymes β-glucosidase (BGase) and β-N-acetyl glucosaminidase (NAGase), and on rates of CO2 efflux in soil incubations. We compare the results to those derived from purified enzyme assays, and to measurements of microbial respiration rates in continuous-flow chemostat culture in which a population of the soil bacterium Pseudomonas fluorescens was grown on medium with similar C:N ratio as the incubated SOM (10:1). Activity levels of both BGase and NAGase decreased by 80% between 25 and 5 °C. These T responses were higher than predictions from intrinsic (i.e., maximum) T responses in purified assays of BGase (minus 50%) and NAGase (minus 67%). This suggests that factors like physical access to substrate or reduced microbial production of enzymes constrained substrate decomposition rates in the soils relatively more at low than at high T. In chemostats, (mass-)specific bacterial respiration rate at T 14.5 °C was 50% of the rate observed at 26.5 °C; in contrast, CO2 efflux from the soil incubations decreased by only ~25% from 25 to 15 °C. The reason for this discrepancy can be manifold, including changes in microbial community composition, but results from ongoing measurements of microbial biomass in the soil samples will allow a closer comparison of these respiration rate responses. Our efforts highlight the significance of experimenting across scales and complexity for a better understanding of SOM dynamics.

CO2 flux from Javanese mud volcanism.

PubMed

Queißer, M; Burton, M R; Arzilli, F; Chiarugi, A; Marliyani, G I; Anggara, F; Harijoko, A

2017-06-01

Studying the quantity and origin of CO 2 emitted by back-arc mud volcanoes is critical to correctly model fluid-dynamical, thermodynamical, and geochemical processes that drive their activity and to constrain their role in the global geochemical carbon cycle. We measured CO 2 fluxes of the Bledug Kuwu mud volcano on the Kendeng Fold and thrust belt in the back arc of Central Java, Indonesia, using scanning remote sensing absorption spectroscopy. The data show that the expelled gas is rich in CO 2 with a volume fraction of at least 16 vol %. A lower limit CO 2 flux of 1.4 kg s -1 (117 t d -1 ) was determined, in line with the CO 2 flux from the Javanese mud volcano LUSI. Extrapolating these results to mud volcanism from the whole of Java suggests an order of magnitude total CO 2 flux of 3 kt d -1 , comparable with the expected back-arc efflux of magmatic CO 2 . After discussing geochemical, geological, and geophysical evidence we conclude that the source of CO 2 observed at Bledug Kuwu is likely a mixture of thermogenic, biogenic, and magmatic CO 2 , with faulting controlling potential pathways for magmatic fluids. This study further demonstrates the merit of man-portable active remote sensing instruments for probing natural gas releases, enabling bottom-up quantification of CO 2 fluxes.

CO2 flux from Javanese mud volcanism

PubMed Central

Burton, M. R.; Arzilli, F.; Chiarugi, A.; Marliyani, G. I.; Anggara, F.; Harijoko, A.

2017-01-01

Abstract Studying the quantity and origin of CO2 emitted by back‐arc mud volcanoes is critical to correctly model fluid‐dynamical, thermodynamical, and geochemical processes that drive their activity and to constrain their role in the global geochemical carbon cycle. We measured CO2 fluxes of the Bledug Kuwu mud volcano on the Kendeng Fold and thrust belt in the back arc of Central Java, Indonesia, using scanning remote sensing absorption spectroscopy. The data show that the expelled gas is rich in CO2 with a volume fraction of at least 16 vol %. A lower limit CO2 flux of 1.4 kg s−1 (117 t d−1) was determined, in line with the CO2 flux from the Javanese mud volcano LUSI. Extrapolating these results to mud volcanism from the whole of Java suggests an order of magnitude total CO2 flux of 3 kt d−1, comparable with the expected back‐arc efflux of magmatic CO2. After discussing geochemical, geological, and geophysical evidence we conclude that the source of CO2 observed at Bledug Kuwu is likely a mixture of thermogenic, biogenic, and magmatic CO2, with faulting controlling potential pathways for magmatic fluids. This study further demonstrates the merit of man‐portable active remote sensing instruments for probing natural gas releases, enabling bottom‐up quantification of CO2 fluxes. PMID:28944134

Soil Carbon Dioxide and Methane Fluxes in a Costa Rican Premontane Wet Forest

NASA Astrophysics Data System (ADS)

Hempel, L. A.; Schade, G. W.; Pfohl, A.

2011-12-01

A significant amount of the global terrestrial biomass is found in tropical forests, and soil respiration is a vital part of its carbon cycling. However, data on soil trace gas flux rates in the tropics are sparse, especially from previously disturbed regions. To expand the database on carbon cycling in the tropics, this study examined soil flux rate and its variability for CO2 and CH4 in a secondary premontane wet forest south of Arenal Volcano in Costa Rica. Data were collected over a six-week period in June and July 2011 during the transition from dry to wet season. Trace gas sampling was performed at three sub-canopy sites of different elevations. The soil is of volcanic origin with a low bulk density, likely an Andisol. An average KCl pH of 4.8 indicates exchangeable aluminum is present, and a NaF pH>11 indicates the soil is dominated by short-range order minerals. Ten-inch diameter PVC rings were used as static flux chambers without soil collars. To find soil CO2 efflux rates, a battery-powered LICOR 840A CO2-H2O Gas Analyzer was used to take measurements in the field, logging CO2 concentration every ten seconds. Additionally, six, 10-mL Nylon syringes were filled with gas samples at 0, 1, 7, 14, 21, and 28 minutes after closing the chambers. These samples were analyzed the same day with a SRI 8610 Gas Chromatograph for concentrations of CO2 and CH4. The average CO2 efflux calculated was 1.7±0.8E-2 g/m2/min, and did not differ between the applied analytical methods. Soil respiration depended strongly on soil moisture, with decreasing efflux rates at higher water-filled pore space values. An annual soil respiration rate of 8.5E3 g/m2/yr was estimated by applying the observed relationship between soil moisture and CO2 efflux to annual soil moisture measurements. The relatively high respiration rates could be caused by the high soil moisture and low soil bulk density, providing optimal conditions for microbial respiration. Several diurnal sampling periods at one site showed that respiration was highest in the early evening, possibly caused by increased root respiration lagging daytime photosynthesis. Measured average CH4 flux was -7.9±6.2E-6 g/m2/min, similar to literature values; its variability was high with no temperature or soil moisture dependence discernible. However, calculated rates show that the forest was a net sink for methane, indicating that the soils were sufficiently well-drained despite high precipitation rates. Future measurements in this NSF-REU program will evaluate the role of water and root respiration in greater detail and will also incorporate sub-canopy and boundary layer gradient measurements to investigate other aspects of the carbon cycle in this environment.

Stem and leaf gas exchange and their responses to fire in a north Australian tropical savanna.

PubMed

Cernusak, Lucas A; Hutley, Lindsay B; Beringer, Jason; Tapper, Nigel J

2006-04-01

We measured stem CO2 efflux and leaf gas exchange in a tropical savanna ecosystem in northern Australia, and assessed the impact of fire on these processes. Gas exchange of mature leaves that flushed after a fire showed only slight differences from that of mature leaves on unburned trees. Expanding leaves typically showed net losses of CO2 to the atmosphere in both burned and unburned trees, even under saturating irradiance. Fire caused stem CO2 efflux to decline in overstory trees, when measured 8 weeks post-fire. This decline was thought to have resulted from reduced availability of C substrate for respiration, due to reduced canopy photosynthesis caused by leaf scorching, and to priority allocation of fixed C towards reconstruction of a new canopy. At the ecosystem scale, we estimated the annual above-ground woody-tissue CO2 efflux to be 275 g C m(-2) ground area year(-1) in a non-fire year, or approximately 13% of the annual gross primary production. We contrasted the canopy physiology of two co-dominant overstory tree species, one of which has a smooth bark on its branches capable of photosynthetic re-fixation (Eucalyptus miniata), and the other of which has a thick, rough bark incapable of re-fixation (Eucalyptus tetrodonta). Eucalyptus miniata supported a larger branch sapwood cross-sectional area in the crown per unit subtending leaf area, and had higher leaf stomatal conductance and photosynthesis than E. tetrodonta. Re-fixation by photosynthetic bark reduces the C cost of delivering water to evaporative sites in leaves, because it reduces the net C cost of constructing and maintaining sapwood. We suggest that re-fixation allowed leaves of E. miniata to photosynthesize at higher rates than those of E. tetrodonta, while the two invested similar amounts of C in the maintenance of branch sapwood.

Seasonality of soil CO2 efflux in a temperate forest: Biophysical effects of snowpack and spring freeze–thaw cycles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Chuankuan; Han, Yi; Chen, Jiquan

2013-08-15

Changes in characteristics of snowfall and spring freeze–thaw-cycle (FTC) events under the warming climate make it critical to understand biophysical controls on soil CO2 efflux (RS) in seasonally snow-covered ecosystems. We conducted a snow removal experiment and took year-round continuous automated measurements of RS, soil temperature (T5) and soil volumetric water content at the 5 cm depth (W5) with a half-hour interval in a Chinese temperate forest in 2010–2011. Our objectives were to: (1) develop statistical models to describe the seasonality of RS in this forest; (2) quantify the contribution of seasonal RS to the annual budget; (3) examine biophysicalmore » effects of snowpack on RS; and (4) test the hypothesis that an FTC-induced enhancement of RS is jointly driven by biological and physical processes.« less

Photochemical internalisation of chemotherapy potentiates killing of multidrug-resistant breast and bladder cancer cells.

PubMed

Adigbli, D K; Wilson, D G G; Farooqui, N; Sousi, E; Risley, P; Taylor, I; Macrobert, A J; Loizidou, M

2007-08-20

Multidrug resistance (MDR) is the major confounding factor in adjuvant solid tumour chemotherapy. Increasing intracellular amounts of chemotherapeutics to circumvent MDR may be achieved by a novel delivery method, photochemical internalisation (PCI). PCI consists of the co-administration of drug and photosensitiser; upon light activation the latter induces intracellular release of organelle-bound drug. We investigated whether co-administration of hypericin (photosensitiser) with mitoxantrone (MTZ, chemotherapeutic) plus illumination potentiates cytotoxicity in MDR cancer cells. We mapped the extent of intracellular co-localisation of drug/photosensitiser. We determined whether PCI altered drug-excreting efflux pump P-glycoprotein (Pgp) expression or function in MDR cells. Bladder and breast cancer cells and their Pgp-overexpressing MDR subclones (MGHU1, MGHU1/R, MCF-7, MCF-7/R) were given hypericin/MTZ combinations, with/without blue-light illumination. Pilot experiments determined appropriate sublethal doses for each. Viability was determined by the 3-[4,5-dimethylthiazolyl]-2,5-diphenyltetrazolium bromide assay. Intracellular localisation was mapped by confocal microscopy. Pgp expression was detected by immunofluorescence and Pgp function investigated by Rhodamine123 efflux on confocal microscopy. MTZ alone (0.1-0.2 microg ml(-1)) killed up to 89% of drug-sensitive cells; MDR cells exhibited less cytotoxicity (6-28%). Hypericin (0.1-0.2 microM) effects were similar for all cells; light illumination caused none or minimal toxicity. In combination, MTZ /hypericin plus illumination, potentiated MDR cell killing, vs hypericin or MTZ alone. (MGHU1/R: 38.65 and 36.63% increase, P<0.05; MCF-7/R: 80.2 and 46.1% increase, P<0.001). Illumination of combined MTZ/hypericin increased killing by 28.15% (P<0.05 MGHU1/R) compared to dark controls. Intracytoplasmic vesicular co-localisation of MTZ/hypericin was evident before illumination and at serial times post-illumination. MTZ was always found in sensitive cell nuclei, but not in dark resistant cell nuclei. In illuminated resistant cells there was some mobilisation of MTZ into the nucleus. Pgp expression remained unchanged, regardless of drug exposure. Pgp efflux was blocked by the Pgp inhibitor verapamil (positive control) but not impeded by hypericin. The increased killing of MDR cancer cells demonstrated is consistent with PCI. PCI is a promising technique for enhancing treatment efficacy.

Photochemical internalisation of chemotherapy potentiates killing of multidrug-resistant breast and bladder cancer cells

PubMed Central

Adigbli, D K; Wilson, D G G; Farooqui, N; Sousi, E; Risley, P; Taylor, I; MacRobert, A J; Loizidou, M

2007-01-01

Multidrug resistance (MDR) is the major confounding factor in adjuvant solid tumour chemotherapy. Increasing intracellular amounts of chemotherapeutics to circumvent MDR may be achieved by a novel delivery method, photochemical internalisation (PCI). PCI consists of the co-administration of drug and photosensitiser; upon light activation the latter induces intracellular release of organelle-bound drug. We investigated whether co-administration of hypericin (photosensitiser) with mitoxantrone (MTZ, chemotherapeutic) plus illumination potentiates cytotoxicity in MDR cancer cells. We mapped the extent of intracellular co-localisation of drug/photosensitiser. We determined whether PCI altered drug-excreting efflux pump P-glycoprotein (Pgp) expression or function in MDR cells. Bladder and breast cancer cells and their Pgp-overexpressing MDR subclones (MGHU1, MGHU1/R, MCF-7, MCF-7/R) were given hypericin/MTZ combinations, with/without blue-light illumination. Pilot experiments determined appropriate sublethal doses for each. Viability was determined by the 3-[4,5-dimethylthiazolyl]-2,5-diphenyltetrazolium bromide assay. Intracellular localisation was mapped by confocal microscopy. Pgp expression was detected by immunofluorescence and Pgp function investigated by Rhodamine123 efflux on confocal microscopy. MTZ alone (0.1–0.2 μg ml−1) killed up to 89% of drug-sensitive cells; MDR cells exhibited less cytotoxicity (6–28%). Hypericin (0.1–0.2 μM) effects were similar for all cells; light illumination caused none or minimal toxicity. In combination, MTZ /hypericin plus illumination, potentiated MDR cell killing, vs hypericin or MTZ alone. (MGHU1/R: 38.65 and 36.63% increase, P<0.05; MCF-7/R: 80.2 and 46.1% increase, P<0.001). Illumination of combined MTZ/hypericin increased killing by 28.15% (P<0.05 MGHU1/R) compared to dark controls. Intracytoplasmic vesicular co-localisation of MTZ/hypericin was evident before illumination and at serial times post-illumination. MTZ was always found in sensitive cell nuclei, but not in dark resistant cell nuclei. In illuminated resistant cells there was some mobilisation of MTZ into the nucleus. Pgp expression remained unchanged, regardless of drug exposure. Pgp efflux was blocked by the Pgp inhibitor verapamil (positive control) but not impeded by hypericin. The increased killing of MDR cancer cells demonstrated is consistent with PCI. PCI is a promising technique for enhancing treatment efficacy. PMID:17667930

Glucose as substrate and signal in priming: Results from experiments with non-metabolizable glucose analogues

NASA Astrophysics Data System (ADS)

Mason-Jones, Kyle; Kuzyakov, Yakov

2016-04-01

Priming of soil organic matter remains the subject of intense research, but a mechanistic explanation of the phenomenon remains to be demonstrated. This is largely due to the multiple effects of easily available carbon on the soil microbial community, and the challenge of separating these influences from one another. Several glucose analogues can be taken up by microbial glucose transporters and have similar regulatory effects on metabolism. These substances are, however, not easily catabolized by the common glycolytic pathway, limiting their energy value. Therefore, they can be used to distinguish between the action of glucose as a metabolic signal, and its influence as an energy source. We incubated an agricultural Haplic Luvisol under controlled conditions for 24 days after addition of: 1) glucose, 2) 3-O-methyl-glucose, 3) α-methylglucoside or 4) 2-deoxyglucose, at three concentration levels, along with a control treatment of water addition. CO2 efflux from soil was monitored by trapping evolved CO2 in NaOH and back-titration with HCl. On the first day after amendment, CO2 efflux from soil increased strongly for glucose and much less for the analogues, relative to the control. Only glucose caused a peak in efflux within the first two days. Peak mineralization of 2-deoxyglucose and α-methylglucoside was delayed until the third day, while CO2 from 3-O-methyl-glucose increased gradually, with a peak delayed by approximately a week. For glucose, the immediate increase in respiration was strongly dependent on the amount of glucose added, but this was not the case for the analogues, indicating that the catabolic potential for these substances was saturated. This is consistent with only a small part of the microbial community being capable of utilizing these carbon sources. In a subsequent experiment, 14C-labelled glucose or 14C-labelled 3-O-methyl-glucose were added to the same soil, enabling quantification of the priming effect. For 3-O-methyl-glucose, priming was observed before the peak of amendment-derived CO2 efflux, indicating that proposed short-term mechanisms involving apparent priming should not be mechanistically dependent on use of an external energy source. Instead, microorganisms respond to glucose through a regulated metabolic activation that can draw on their internal reserves. Stronger priming occurred during the delayed CO2 peak of 3-O-methyl-glucose. The correspondence of maximum catabolism and priming supports a role for carbon and energy supply in the mechanisms of 'real' priming, which take place over the longer term. These results demonstrate the potential of glucose analogues for disentangling energy-driven from activation-driven mechanisms of priming.

Bare soil respiration in a temperate climate: multiyear evaluation of a coupled CO2 transport and carbon turnover model

NASA Astrophysics Data System (ADS)

Herbst, M.; Hellebrand, H. J.; Bauer, J.; Vanderborght, J.; Vereecken, H.

2006-12-01

The modelling of soil respiration plays an important role in the prediction of climate change. Soil respiration is usually divided in autotrophic and heterotrophic fractions orginating from root respiration and microbial decomposition of soil organic carbon, respectively. We report on the coupling of a one dimensional water, heat and CO2 flux model (SOILCO2) with a model of carbon turnover (RothC) for the prediction of soil heterotrophic respiration. The coupled model was tested using soil temperature, soil moisture, and CO2 flux measurements in a bare soil experimental plot located in Bornim, Germany. A seven year record of soil and CO2 measurements covering a broad range of atmospheric and soil conditions was availabe to evaluate the model performance. After calibrating the decomposition rate constant of the humic fraction pool, the overall model performance on CO2 efflux prediction was acceptable. The root mean square error for the CO2 efflux prediction was 0.12 cm ³/cm ²/d. During the severe summer draught of 2003 very high CO2 efluxes were measured, which could not be explained by the model. Those high fluxes were attributed to a pressure pumping effect. The soil temperature dependency of CO2 production was well described by th e model, whereas the biggest opportunity for improvement is seen in a better description of the soil moisture dependency of CO2 production. The calibration of the humus decomposition rate constant revealed a value of 0.09 1/d, which is higher than the original value suggested by the RothC model developers but within the range of literature values.

A metabolic hypothesis for the evolution of temperature effects on the arterial PCO2  and pH of vertebrate ectotherms.

PubMed

Hillman, Stanley S; Hedrick, Michael S

2018-01-04

Body temperature increases in ectothermic vertebrates characteristically lead to both increases in arterial P CO 2  ( P a CO 2 ) and declines in resting arterial pH (pHa) of about 0.017 pH units per 1°C increase in temperature. This 'alphastat' pH pattern has previously been interpreted as being evolutionarily driven by the maintenance of a constant protonation state on the imidazole moiety of histidine protein residues, hence stabilizing protein structure-function. Analysis of the existing data for interclass responses of ectothermic vertebrates shows different degrees of P a CO 2  increases and pH declines with temperature between the classes, with reptiles>amphibians>fish. The P a CO 2  at the temperature where maximal aerobic metabolism ( V̇ O 2 ,max ) is achieved is significantly and positively correlated with temperature for all vertebrate classes. For ectotherms, the P a CO 2  where V̇ O 2 ,max is greatest is also correlated with V̇ O 2 ,max , indicating there is an increased driving force for CO 2 efflux that is lowest in fish, intermediate in amphibians and highest in reptiles. The pattern of increased P a CO 2  and the resultant reduction of pHa in response to increased body temperature would serve to increase CO 2 efflux, O 2 delivery and blood buffering capacity and maintain ventilatory scope. This represents a new hypothesis for the selective advantage of arterial pH regulation from a systems physiology perspective in addition to the advantages of maintenance of protein structure-function. © 2018. Published by The Company of Biologists Ltd.

Warming-related increases in soil CO2 efflux are explained by increased below-ground carbon flux

Treesearch

Christian P. Giardina; Creighton M. Litton; Susan E. Crow; Gregory P Asner

2014-01-01

The universally observed exponential increase in soil-surface CO2 effux (‘soil respiration’; FS) with increasing temperature has led to speculation that global warming will accelerate soil organic carbon (SOC) decomposition, reduce SOC storage, and drive a positive feedback to future warming. However, interpreting temperature–FS relationships,...

P-glycoprotein is responsible for the poor intestinal absorption and low toxicity of oral aconitine: In vitro, in situ, in vivo and in silico studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yang, Cuiping, E-mail: yangsophia76@hotmail.com; Zhang, Tianhong, E-mail: wdzth@sina.com; Li, Zheng, E-mail: lizh2524@126.com

Aconitine (AC) is a highly toxic alkaloid from bioactive plants of the genus Aconitum, some of which have been widely used as medicinal herbs for thousands of years. In this study, we systematically evaluated the potential role of P-glycoprotein (P-gp) in the mechanisms underlying the low and variable bioavailability of oral AC. First, the bidirectional transport of AC across Caco-2 and MDCKII-MDR1 cells was investigated. The efflux of AC across monolayers of these two cell lines was greater than its influx. Additionally, the P-gp inhibitors, verapamil and cyclosporin A, significantly decreased the efflux of AC. An in situ intestinal perfusionmore » study in rats showed that verapamil co-perfusion caused a significant increase in the intestinal permeability of AC, from 0.22 × 10{sup −5} to 2.85 × 10{sup −5} cm/s. Then, the pharmacokinetic profile of orally administered AC with or without pre-treatment with verapamil was determined in rats. With pre-treatment of verapamil, the maximum plasma concentration (C{sub max}) of AC increased sharply, from 39.43 to 1490.7 ng/ml. Accordingly, a 6.7-fold increase in the area under the plasma concentration–time curve (AUC{sub 0–12} {sub h}) of AC was observed when co-administered with verapamil. In silico docking analyses suggested that AC and verapamil possess similar P-gp recognition mechanisms. This work demonstrated that P-gp is involved in limiting the intestinal absorption of AC and attenuating its toxicity to humans. Our data indicate that potential P-gp-mediated drug–drug interactions should be considered carefully in the clinical application of aconite and formulations containing AC. - Highlights: • Verapamil and cyclosporin A decreased the efflux of aconitine across Caco-2 cells. • Both inhibitors decreased the efflux of aconitine across MDCKII-MDR1 cells. • Co-perfusion with verapamil increased the intestinal permeability of aconitine. • Co-administration with verapamil sharply increased the C{sub max} and AUC of aconitine. • P-gp interacted with both verapamil and aconitine and recognized them similarly.« less

Comparative study of flux of FITC-labeled Dextran 4000 on normal (iso)- and hyper-osmolarity in basal side in caco-2 cell monolayers.

PubMed

Ohkubo, Rie; Tomita, Mikio; Hotta, Yoshiyuki; Nagira, Mayuko; Hayashi, Masahiro

2003-01-01

We have shown previously that the flux of fluorescein isothiocyanate dextran 4000 (FD-4) is transported across the Caco-2 cell monolayers in a polarized fashion favoring the basal to apical direction under normal conditions (i.e., isotonic solution in basal side). Furthermore, FD-4 transport may occur via a process that included a certain degree of substrate specificity for polysaccharide and transcytosis. In the present study, we compared the flux of FD-4 in the basal to apical direction (efflux) and the apical to basal direction (influx) in stress conditions (i.e., hyperosmolarity in basal side) to those in normal conditions (i.e., iso-osmolarity in basal side). The efflux of FD-4 was increased by hyperosmolarity in basal side, but the influx was decreased when compared with normal conditions. Neither dextran 10, 000 nor colchicine inhibited the efflux of FD-4 in hyperosmolarity conditions. The inhibition of efflux of FD-4 was observed not by S-nitroso-N-acetylpenicillamine but by sodium nitroprusside and sodium ferrocyanide. These results collectively suggest that hyperosmolarity in basal side accelerates the efflux of FD-4 across the transcellular route but not across the paracellular route in Caco-2 cell monolayers. And it is indicated that cyanide rather than nitric oxide is involved in dysfunction of the FD-4 efflux system irrespective of conditions such as normal osmolarity or hyperosmolarity.

CO2 efflux from soil under influence of cadmium and glucose

NASA Astrophysics Data System (ADS)

Gilmullina, Aliia; Galitskaya, Polina; Selivanovskaya, Svetlana

2017-04-01

Soil is the largest pool of organic carbon. Any anthropogenic activity may change the soil organic carbon stock resulting in the atmospheric carbon concentration increase. Organic wastes and sewage sludge are often used for soil fertilization. These amendments often contain not only organic compounds stimulating soil microflora but also toxic compounds e.g. metals inhibiting them. The question about the influence of such amendments on soil carbon stock still remains open. The aim of this study was to evaluate individual glucose and cadmium (Cd) additions and their combined effects on carbon mineralization and microbial community structure in forest soil sampled from different depths (0-20 cm, 20-40 cm and 40-60 cm). We incubated soil samples for 14 days after the addition of: glucose (10000 mg kg-1), Cd (300 mg kg-1) and their mixture. CO2 efflux was measured by CO2 trapping in NaOH, at the 3rd, 7th and 14th days of incubation DNA was extracted from soil samples for assessment of microbial community structure via real-time PCR and Illumina sequencing. Glucose addition induced the increase of soil respiration and fungal-bacterial ratio. However, bacterial alpha-biodiversity decreased as glucose addition caused the dominance of Proteobacteria (0-20 cm, 20-40 cm and 40-60 cm), Actinobacteria (20-40 cm) and Acidobacteria (40-60 cm) phyla. Single Cd addition did not have any effect on parameters studied. In case of simultaneous addition of glucose and Cd, soil respiration and microbial community structure mainly depended more on glucose amendment as compared with metal.

Measuring the ratio of CO2 efflux to O2 influx in tree stem respiration.

PubMed

Hilman, Boaz; Angert, Alon

2016-11-01

In recent studies, the ratio of tree stem CO 2 efflux to O 2 influx has been defined as the apparent respiratory quotient (ARQ). The metabolism of carbohydrates, the putative respiratory substrate in trees, is expected to yield an ARQ of 1.0. However, previous studies have reported ARQ values ranging between 0.23 and 0.90. These interesting results may indicate internal transport of respired CO 2 within stems; yet no simple field applicable methods for ARQ measurement have been available. Here, we report on the assembly of a closed circulating system called 'Hampadah', which uses CO 2 and O 2 analyzers to measure air samples from stem chambers. We tested the performance of the Hampadah with samples from 36 trees (Tetragastris panamensis (Engl.) Kuntze). Additionally, we showed the feasibility of measuring ARQ directly from stem chambers, using portable CO 2 and O 2 sensors, in both discrete and continuous modes of operation. The Hampadah measurement proved to be consistent with CO 2 gas standards (R 2 = 0.999) and with O 2 determined by O 2 /Ar measurements with a mass spectrometer (R 2 = 0.998). The Hampadah gave highly reproducible results for ARQ determination of field samples (±0.01 for duplicates). The portable sensors measurement showed good correlation with the Hampadah in measuring CO 2 , O 2 and ARQ (n = 5, R 2 = 0.97, 0.98 and 0.91, respectively). We have demonstrated here that the Hampadah and the sensors' methods enable accurate ARQ measurements for both laboratory and field research. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Evaluating the Community Land Model in a pine stand with shading manipulations and 13CO 2 labeling

DOE PAGES

Mao, Jiafu; Ricciuto, Daniel M.; Thornton, Peter E.; ...

2016-02-03

Carbon partitioning and flow through ecosystems regulates land surface atmosphere CO 2 exchange and thus is a key, albeit uncertain component of mechanistic models. The Partitioning in Trees and Soil (PiTS) experiment-model project tracked C partitioning through a young Pinus taeda stand following pulse-labeling with 13CO 2 and two levels of shading. The field component of this project provided process-oriented data that was used to evaluate and improve terrestrial biosphere model simulations of rapid shifts in carbon partitioning and hydrological dynamics under varying environmental conditions. Here we tested the performance of the Community Land Model version 4 (CLM4) in capturingmore » short-term carbon and water dynamics in relation to manipulative shading treatments, and the timing and magnitude of carbon fluxes through various compartments of the ecosystem. To constrain CLM4 to closely simulate pretreatment conditions, we calibrated select model parameters with the pretreatment observational data. Compared to CLM4 simulations with default parameters, CLM4 with calibrated model parameters was better able to simulate pretreatment vegetation carbon pools, light response curves, and other initial states and fluxes of carbon and water. Over a 3-week treatment period, the calibrated CLM4 generally reproduced the impacts of shading on average soil moisture at 15-95 cm depth, transpiration, relative change in stem carbon, and soil CO 2 efflux rate, although some discrepancies in the estimation of magnitudes and temporal evolutions existed. CLM4, however, was not able to track the progression of the 13CO 2 label from the atmosphere through foliage, phloem, roots or surface soil CO 2 efflux, even when optimized model parameters were used. This model bias arises, in part, from the lack of a short-term non-structural carbohydrate storage pool and progressive timing of within-plant transport, thus indicating a need for future work to improve the allocation routines in CLM4. Overall, these types of detailed evaluations of CLM4, paired with intensive field manipulations, can help to identify model strengths and weaknesses, model uncertainties, and additional observations necessary for future model development.« less

Day and Night Variability of CO2 Fluxes and Priming Effects under zea Mays Measured in High Resolution

NASA Astrophysics Data System (ADS)

Splettstoesser, Thomas; Pausch, Johanna

2017-04-01

Plant induced increase of soil organic matter turnover rates contribute to carbon emissions in agricultural land use systems. In order to better understand these rhizosphere priming effects, we conducted an experiment which enabled us to monitor CO2 fluxes under Zea mays plants in high resolution. The experiment was conducted in a climate chamber where the plants were grown in tightly sealed boxes for 40 days and CO2 efflux from soil was measured twice a day. Continuous 13C-CO2 label was used to allow differentiation between plant- and soil-derived CO2.This enabled us to monitor root respiration and soil organic matter turnover in the early stages of plant growth and to highlight changes in soil CO2 emissions and priming effects between day and night. The measurements were conducted with a PICARRO G2131-I C high-precision isotopic CO2 Analyzer (PICARRO INC.) utilizing an automated valve system governed by a CR1000 data logger (Campbell Scientific). After harvest roots and shoots were analyzed for 13C content. Microbial biomass, root length density and enzymatic activities in soil were measured and linked to soil organic matter turnover rates. Results show an increased soil CO2 efflux at day time periods and an overall increase with increasing plant biomass. No difference in chloroform fumigation extractable microbial biomass has been found but a strong negative priming effect was measured in the short experimental period, suggesting that the microbes shifted to the utilization of plant exudates without actual microbial growth triggered by the new labile C input. This is coherent with the observed shift in enzyme kinetics. With this experimental setup we show that measurement of priming effects in high resolution can be achieved.

Diffuse degassing survey at the Higashi Izu monogenetic volcano field, Japan

NASA Astrophysics Data System (ADS)

Notsu, Kenji; Pérez, Nemesio M.; Fujii, Naoyuki; Hernández, Pedro A.; Mori, Toshiya; Padrón, Eleazar; Melián, Gladys

2016-04-01

The Higashi-Izu monogenetic volcanic group, which consists of more than 60 volcanoes, overlies the polygenetic volcanoes in the eastern part of the Izu peninsula, Japan, which are distributed over the area of 350 km2. Some of the monogenetic volcanoes are located on northwest-southeast alignments, suggesting that they developed along fissures. Recent volcanic activity occurred offshore, e.g., at the Izu-Oshima volcano, which erupted in 1986 and a submarine eruption of the small new Teishi knoll off eastern Izu Peninsula in 1989 (Hasebe et al., 2001). This study was carried out to investigate the possible relationship of diffuse CO2 emission and the recent seismic activity recorded NE of Higashi Izu monogenetic volcanic field, to quantify the rate at which CO2 is diffusely degassed from the studied area including Omuroyama volcano and to identify the structures controlling the degassing process. Measurements were carried out over a three day period from 8-10 July 2013. Diffuse CO2 emission surveys were always carried out following the accumulation chamber method and spatial distribution maps were constructed following the sequential Gaussian simulation (sGs) procedure. Soil gas samples were collected at 30-40 cm depth by withdrawal into 60 cc hypodermic syringes to characterize the chemical and isotopic composition of the soil gas. At Omurayama volcano, soil CO2 efflux values ranged from non-detectable to 97.5 g m-2 d-1, while at the seismic swarm zone ranged from 1.5 to 233.2 g m-2 d-1 and at the fault zone ranged from 5.7 to 101.2 g m-2 d-1. Probability-plot technique of all CO2 efflux data showed two different populations, background with a mean of 8.7 g m-2 d-1 and peak with a mean of 92.7 g m-2 d-1. In order to strength the deep seated contribution to the soil gases at the studied are, carbon isotopic analysis were performed in the CO2 gas. Soil gases (He, CO2 and N2) showed a clear mixing trend between air composition and a rich CO2 end member, suggesting the influence of a deep magmatic reservoir on the soil degassing at the studied area. To estimate the total diffuse CO2 output released from Omurayama, the average of 100 simulations was considered, giving an average of 22 ± 2 t d-1 of diffuse CO2 released by Miharayama. Regarding to the geochemical transects along the Amagi Road and perpendicular to the fault, CO2 efflux values >9xBackground were observed close to the location of the fault. These results show possible linear positive anomalies may be caused by the presence of the active fault which has a higher porosity than surrounding soils, allowing an increased flux of CO2 to reach the surface from depth. References: Hasebe et al., 2001. Bull. Volcanol., 63, 377.

Calcium effects on stomatal movement in Commelina communis L

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schwartz, A.; Ilan, N.; Grantz, D.A.

1988-07-01

Stomatal movements depends on both ion influx and efflux: attainment of steady state apertures reflects modulation of either or both processes. The role of Ca{sup 2+} in those two processes was investigated in isolated epidermal strips of Commelina communis, using the Ca{sup 2+} chelator EGTA to reduce apoplastic (Ca{sup 2+}). The results suggest that a certain concentration of Ca{sup 2+} is an absolute requirement for salt efflux and stomatal closure. EGTA (2 millimolar) increased KCl-dependent stomatal opening in darkness and completely inhibited the dark-induced closure of initially open stomata. Closure was inhibited even in a KCl-free medium. Thus, maintenance ofmore » stomata in the open state does not necessarily depend on continued K{sup +} influx but on the inhibition of salt efflux. Opening in the dark was stimulated by IAA in a concentration-dependent manner, up to 15.4 micrometer without reaching saturation, while the response to EGTA leveled off at 9.2 micrometer. IAA did not inhibit stomatal closure to the extent it stimulated opening. The response to IAA is thus consistent with a primary stimulation of opening, while EGTA can be considered a specific inhibitor of stomatal closing since it inhibits closure to a much larger degree than it stimulates opening. CO{sub 2} causes concentration-dependent reduction in the steady state stomatal aperture. EGTA completely reversed CO{sub 2}-induced closing of open stomata but only partially prevented the inhibition of opening.« less

The putative drug efflux systems of the Bacillus cereus group

PubMed Central

Elbourne, Liam D. H.; Vörös, Aniko; Kroeger, Jasmin K.; Simm, Roger; Tourasse, Nicolas J.; Finke, Sarah; Henderson, Peter J. F.; Økstad, Ole Andreas; Paulsen, Ian T.; Kolstø, Anne-Brit

2017-01-01

The Bacillus cereus group of bacteria includes seven closely related species, three of which, B. anthracis, B. cereus and B. thuringiensis, are pathogens of humans, animals and/or insects. Preliminary investigations into the transport capabilities of different bacterial lineages suggested that genes encoding putative efflux systems were unusually abundant in the B. cereus group compared to other bacteria. To explore the drug efflux potential of the B. cereus group all putative efflux systems were identified in the genomes of prototypical strains of B. cereus, B. anthracis and B. thuringiensis using our Transporter Automated Annotation Pipeline. More than 90 putative drug efflux systems were found within each of these strains, accounting for up to 2.7% of their protein coding potential. Comparative analyses demonstrated that the efflux systems are highly conserved between these species; 70–80% of the putative efflux pumps were shared between all three strains studied. Furthermore, 82% of the putative efflux system proteins encoded by the prototypical B. cereus strain ATCC 14579 (type strain) were found to be conserved in at least 80% of 169 B. cereus group strains that have high quality genome sequences available. However, only a handful of these efflux pumps have been functionally characterized. Deletion of individual efflux pump genes from B. cereus typically had little impact to drug resistance phenotypes or the general fitness of the strains, possibly because of the large numbers of alternative efflux systems that may have overlapping substrate specificities. Therefore, to gain insight into the possible transport functions of efflux systems in B. cereus, we undertook large-scale qRT-PCR analyses of efflux pump gene expression following drug shocks and other stress treatments. Clustering of gene expression changes identified several groups of similarly regulated systems that may have overlapping drug resistance functions. In this article we review current knowledge of the small molecule efflux pumps encoded by the B. cereus group and suggest the likely functions of numerous uncharacterised pumps. PMID:28472044

Striatal norepinephrine efflux in l-DOPA-induced dyskinesia.

PubMed

Ostock, Corinne Y; Bhide, Nirmal; Goldenberg, Adam A; George, Jessica A; Bishop, Christopher

2018-03-01

l-DOPA remains the primary treatment for Parkinson's disease (PD). Unfortunately, its therapeutic benefits are compromised by the development of abnormal involuntary movements (AIMs) known as l-DOPA-induced dyskinesia (LID). The norepinephrine (NE) system originating in the locus coeruleus is profoundly affected in PD and known to influence dopamine (DA) signaling. However, the effect of noradrenergic loss on l-DOPA-induced striatal monoamine efflux and Parkinsonian motor behavior remains controversial and is frequently overlooked in traditional animal models of LID. Thus, the current study sought to determine whether degeneration of the DA and/or NE system(s) altered l-DOPA-induced striatal monoamine efflux in hemiparkinsonian rats with additional NE loss induced by the potent NE-toxin α DA beta hydroxylase (DBH)-saporin. Sham-, DA-, NE-, and dual DA + NE-lesioned rats were treated with l-DOPA (6 mg/kg, s.c.) for 2 weeks. Thereafter, l-DOPA-mediated striatal monoamine efflux was measured with in vivo microdialysis, and concurrent AIMs testing occurred to determine responsiveness to l-DOPA. Noradrenergic lesions exacerbated parkinsonian motor deficits but did not significantly alter LID expression or corresponding l-DOPA-induced striatal monoamine efflux. Interestingly, l-DOPA-induced striatal NE efflux rather than DA efflux, corresponded more closely with dyskinesia severity. Moreover, marked reductions in striatal NE tissue concentration did not appear to impact l-DOPA-induced striatal NE efflux. The current study implicates l-DOPA-induced striatal NE as an important factor in LID expression and demonstrates the importance of developing treatment strategies that co-modulate the NE and DA systems. Copyright © 2018 Elsevier Ltd. All rights reserved.

Disentangling the drivers of coarse woody debris behavior and carbon gas emissions during fire

NASA Astrophysics Data System (ADS)

Zhao, Weiwei; van der Werf, Guido R.; van Logtestijn, Richard S. P.; van Hal, Jurgen R.; Cornelissen, Johannes H. C.

2016-04-01

The turnover of coarse woody debris, a key terrestrial carbon pool, plays fundamental roles in global carbon cycling. Biological decomposition and fire are two main fates for dead wood turnover. Compared to slow decomposition, fire rapidly transfers organic carbon from the earth surface to the atmosphere. Both a-biotic environmental factors and biotic wood properties determine coarse wood combustion and thereby its carbon gas emissions during fire. Moisture is a key inhibitory environmental factor for fire. The properties of dead wood strongly affect how it burns either directly or indirectly through interacting with moisture. Coarse wood properties vary between plant species and between various decay stages. Moreover, if we put a piece of dead wood in the context of a forest fuel bed, the soil and wood contact might also greatly affect their fire behavior. Using controlled laboratory burns, we disentangled the effects of all these driving factors: tree species (one gymnosperms needle-leaf species, three angiosperms broad-leaf species), wood decay stages (freshly dead, middle decayed, very strongly decayed), moisture content (air-dried, 30% moisture content in mass), and soil-wood contact (on versus 3cm above the ground surface) on dead wood flammability and carbon gas efflux (CO2 and CO released in grams) during fire. Wood density was measured for all coarse wood samples used in our experiment. We found that compared to other drivers, wood decay stages have predominant positive effects on coarse wood combustion (for wood mass burned, R2=0.72 when air-dried and R2=0.52 at 30% moisture content) and associated carbon gas emissions (for CO2andCO (g) released, R2=0.55 when air-dried and R2=0.42 at 30% moisture content) during fire. Thus, wood decay accelerates wood combustion and its CO2 and CO emissions during fire, which can be mainly attributed to the decreasing wood density (for wood mass burned, R2=0.91 when air-dried and R2=0.63 at 30% moisture content) as wood becomes more decomposed. Our results provide quantitative experimental evidence for how several key abiotic and biotic factors, especially moisture content and the key underlying trait wood density, as well as their interactions, together drive coarse wood carbon turnover through fire. Our experimental data on coarse wood behavior and gas efflux during fire will help to improve the predictive power of global vegetation climate models on dead wood turnover and its feedback to climate.

Carbon dioxide and methane fluxes from the transitional zone of a Virginia ephemeral wetland

NASA Astrophysics Data System (ADS)

Atkins, J. W.; Epstein, H. E.; Welsch, D. L.

2014-12-01

The spatial and temporal controls mediating the switch between anaerobic and aerobic respiration within soils located in transitional zones adjacent to ephemeral wetlands remains unclear. As ephemeral wetlands dry down, a soil moisture gradient develops in adjacent transitional zones resulting in changes to the soil environment—moving from anoxic to oxic conditions. Under oxic conditions, aerobic decomposition and CO2 fluxes should dominate, while under anoxic conditions, anaerobic decomposition and CH4 emissions should be more prominent. To investigate the spatial controls and temporal dynamics of anaerobic and aerobic respiration we ran three 20 m transects starting from the late spring peak wetland edge (June 1, 2014 max. lake extent) of Lake Arnold, an ephemeral wetland located at Blandy Experimental Farm in Boyce, Virginia. At 10 m intervals along each transect, high-resolution soil moisture and temperature sensors were installed at three depth levels in the soil (5 cm, 20 cm, and 50 cm). Soil surface CO2 efflux was measured weekly at 5 m intervals using a portable, infra-red gas analyzer and surface chamber (EGM-4 and SRC-1; PP Systems; Amherst, MA). CH4 emissions were sampled weekly using a non-steady state chamber at 10 m intervals along each transect and analyzed in the lab using gas chromatography. Redox potential was measured weekly at two soil depths (5 cm and 20 cm) at 5 m intervals using platinum electrodes and a Ag/Cl reference electrode. Lake Arnold water levels decreased at a rate of 18.16 mm day-1 during the month of July. Preliminary results show a distinct drop in soil moisture at 5 and 20 cm depths at the 0 and 10 m distances along each transect. At 50 cm, soil moisture shows no distinct trend. Late July measurements of redox potential ranged from -196 mV to 865 mV and was correlated with soil moisture (R2 = 0.52). Rates of soil CO2 efflux were diminished at volumetric water contents (VWC) above 45% (ranging from 2.45 - 7.3 µmol CO2 m-2 sec-1). Below 45% VWC, soil CO2 efflux rates ranged from 4.5 - 9.6 µmol CO2 m-2 sec-1.

Co-treatment with grapefruit juice inhibits while chronic administration activates intestinal P-glycoprotein-mediated drug efflux.

PubMed

Panchagnula, R; Bansal, T; Varma, M V S; Kaul, C L

2005-12-01

P-Glycoprotein (P-gp) mediated efflux is recognized as a significant biochemical barrier affecting oral absorption for a number of drugs. Various conflicting reports have been published regarding the effects of grapefruit juice (GFJ) on P-gp-mediated drug efflux, in which GFJ has been shown both to inhibit and activate it. Hence, the present study adopted a two-way approach, involving both co-treatment and chronic administration. Bi-directional transport of paclitaxel (PCL) was carried out in the absence and presence of GFJ extract, in rat everted ileum sac. Further, the effect of chronic administration of GFJ to rats was characterized by permeability studies with indinavir (INDI). Co-treatment of GFJ extract at 100% concentration reduced the asymmetric transport of PCL (efflux ratio = 20.8) by increasing absorptive (A --> B) transport by 921% and reducing secretory (B --> A) transport by 41%. Further, GFJ showed a concentration dependent effect on PCL permeability. Imipramine, a passive permeability marker with absorptive permeability of 15.33 +/- 4.26 x 10(-6) cm/s showed no asymmetric transport and also no significant (P < 0.05) change in permeability in the presence of GFJ. Chronic administration of GFJ resulted in a significant decrease in absorptive transport of indinavir, which was even greater than that produced by rifampicin pretreatment. No change in permeability of propranolol, a passive permeability marker, was observed. Further, the decrease in absorptive transport of INDI was reversed by the P-gp inhibitor verapamil. In conclusion, GFJ extract inhibited P-gp-mediated efflux in co-treatment, whereas chronic administration led to increased levels of P-gp expression, thus having a profound effect on intestinal absorption and GFJ-drug interactions in vivo.

Efflux as a mechanism of antimicrobial drug resistance in clinical relevant microorganisms: the role of efflux inhibitors.

PubMed

Willers, Clarissa; Wentzel, Johannes Frederik; du Plessis, Lissinda Hester; Gouws, Chrisna; Hamman, Josias Hendrik

2017-01-01

Microbial resistance against antibiotics is a serious threat to the effective treatment of infectious diseases. Several mechanisms exist through which microorganisms can develop resistance against antimicrobial drugs, of which the overexpression of genes to produce efflux pumps is a major concern. Several efflux transporters have been identified in microorganisms, which infer resistance against specific antibiotics and even multidrug resistance. Areas covered: This paper focuses on microbial resistance against antibiotics by means of the mechanism of efflux and gives a critical overview of studies conducted to overcome this problem by combining efflux pump inhibitors with antibiotics. Information was obtained from a literature search done with MEDLINE, Pubmed, Scopus, ScienceDirect, OneSearch and EBSCO host. Expert opinion: Efflux as a mechanism of multidrug resistance has presented a platform for improved efficacy against resistant microorganisms by co-administration of efflux pump inhibitors with antimicrobial agents. Although proof of concept has been shown for this approach with in vitro experiments, further research is needed to develop more potent inhibitors with low toxicity which is clinically effective.

Soil water content drives spatiotemporal patterns of CO2 and N2O emissions from a Mediterranean riparian forest soil

NASA Astrophysics Data System (ADS)

Poblador, Sílvia; Lupon, Anna; Sabaté, Santiago; Sabater, Francesc

2017-09-01

Riparian zones play a fundamental role in regulating the amount of carbon (C) and nitrogen (N) that is exported from catchments. However, C and N removal via soil gaseous pathways can influence local budgets of greenhouse gas (GHG) emissions and contribute to climate change. Over a year, we quantified soil effluxes of carbon dioxide (CO2) and nitrous oxide (N2O) from a Mediterranean riparian forest in order to understand the role of these ecosystems on catchment GHG emissions. In addition, we evaluated the main soil microbial processes that produce GHG (mineralization, nitrification, and denitrification) and how changes in soil properties can modify the GHG production over time and space. Riparian soils emitted larger amounts of CO2 (1.2-10 g C m-2 d-1) than N2O (0.001-0.2 mg N m-2 d-1) to the atmosphere attributed to high respiration and low denitrification rates. Both CO2 and N2O emissions showed a marked (but antagonistic) spatial gradient as a result of variations in soil water content across the riparian zone. Deep groundwater tables fueled large soil CO2 effluxes near the hillslope, while N2O emissions were higher in the wet zones adjacent to the stream channel. However, both CO2 and N2O emissions peaked after spring rewetting events, when optimal conditions of soil water content, temperature, and N availability favor microbial respiration, nitrification, and denitrification. Overall, our results highlight the role of water availability on riparian soil biogeochemistry and GHG emissions and suggest that climate change alterations in hydrologic regimes can affect the microbial processes that produce GHG as well as the contribution of these systems to regional and global biogeochemical cycles.

ABA-Induced Stomatal Closure Involves ALMT4, a Phosphorylation-Dependent Vacuolar Anion Channel of Arabidopsis[OPEN

PubMed Central

Baetz, Ulrike; Huck, Nicola V.; Zhang, Jingbo

2017-01-01

Stomatal pores are formed between a pair of guard cells and allow plant uptake of CO2 and water evaporation. Their aperture depends on changes in osmolyte concentration of guard cell vacuoles, specifically of K+ and Mal2−. Efflux of Mal2− from the vacuole is required for stomatal closure; however, it is not clear how the anion is released. Here, we report the identification of ALMT4 (ALUMINUM ACTIVATED MALATE TRANSPORTER4) as an Arabidopsis thaliana ion channel that can mediate Mal2− release from the vacuole and is required for stomatal closure in response to abscisic acid (ABA). Knockout mutants showed impaired stomatal closure in response to the drought stress hormone ABA and increased whole-plant wilting in response to drought and ABA. Electrophysiological data show that ALMT4 can mediate Mal2− efflux and that the channel activity is dependent on a phosphorylatable C-terminal serine. Dephosphomimetic mutants of ALMT4 S382 showed increased channel activity and Mal2− efflux. Reconstituting the active channel in almt4 mutants impaired growth and stomatal opening. Phosphomimetic mutants were electrically inactive and phenocopied the almt4 mutants. Surprisingly, S382 can be phosphorylated by mitogen-activated protein kinases in vitro. In brief, ALMT4 likely mediates Mal2− efflux during ABA-induced stomatal closure and its activity depends on phosphorylation. PMID:28874508

Forest floor and mineral soil respiration rates in a northern Minnesota red pine chronosequence

USGS Publications Warehouse

Powers, Matthew; Kolka, Randall; Bradford, John B.; Palik, Brian J.; Jurgensen, Martin

2018-01-01

We measured total soil CO2 efflux (RS) and efflux from the forest floor layers (RFF) in red pine (Pinus resinosaAit.) stands of different ages to examine relationships between stand age and belowground C cycling. Soil temperature and RS were often lower in a 31-year-old stand (Y31) than in 9-year-old (Y9), 61-year-old (Y61), or 123-year-old (Y123) stands. This pattern was most apparent during warm summer months, but there were no consistent differences in RFF among different-aged stands. RFF represented an average of 4–13% of total soil respiration, and forest floor removal increased moisture content in the mineral soil. We found no evidence of an age effect on the temperature sensitivity of RS, but respiration rates in Y61 and Y123 were less sensitive to low soil moisture than RS in Y9 and Y31. Our results suggest that soil respiration’s sensitivity to soil moisture may change more over the course of stand development than its sensitivity to soil temperature in red pine, and that management activities that alter landscape-scale age distributions in red pine forests could have significant impacts on rates of soil CO2 efflux from this forest type.

Species and Media Effects on Soil Carbon Dynamics in the Landscape

PubMed Central

Marble, S. Christopher; Prior, Stephen A.; Runion, G. Brett; Torbert, H. Allen; Gilliam, Charles H.; Fain, Glenn B.; Sibley, Jeff L.; Knight, Patricia R.

2016-01-01

Three woody shrub species [cleyera (Ternstroemia gymnanthera Thunb. ‘Conthery’), Indian hawthorn (Rhaphiolepis indica L.) and loropetalum (Loropetalum chinensis Oliv.‘Ruby’)] were container-grown for one growing season in 2008 using either pinebark (industry standard), clean chip residual or WholeTree (derived by-products from the forestry industry) as potting substrates and then transplanted into the landscape in 2008. An Automated Carbon Efflux System was used to continually monitor soil CO2 efflux from December 2010 through November 2011 in each species and substrate combination. Changes in soil carbon (C) levels as a result of potting substrate were assessed through soil sampling in 2009 and 2011 and plant biomass was determined at study conclusion. Results showed that soil CO2-C efflux was similar among all species and substrates, with few main effects of species or substrate observed throughout the study. Soil analysis showed that plots with pinebark contained higher levels of soil C in both 2009 and 2011, suggesting that pinebark decomposes slower than clean chip residual or WholeTree and consequently has greater C storage potential than the two alternative substrates. Results showed a net C gain for all species and substrate combinations; however, plants grown in pinebark had greater C sequestration potential. PMID:27140321

Species and Media Effects on Soil Carbon Dynamics in the Landscape

NASA Astrophysics Data System (ADS)

Marble, S. Christopher; Prior, Stephen A.; Runion, G. Brett; Torbert, H. Allen; Gilliam, Charles H.; Fain, Glenn B.; Sibley, Jeff L.; Knight, Patricia R.

2016-05-01

Three woody shrub species [cleyera (Ternstroemia gymnanthera Thunb. ‘Conthery’), Indian hawthorn (Rhaphiolepis indica L.) and loropetalum (Loropetalum chinensis Oliv.‘Ruby’)] were container-grown for one growing season in 2008 using either pinebark (industry standard), clean chip residual or WholeTree (derived by-products from the forestry industry) as potting substrates and then transplanted into the landscape in 2008. An Automated Carbon Efflux System was used to continually monitor soil CO2 efflux from December 2010 through November 2011 in each species and substrate combination. Changes in soil carbon (C) levels as a result of potting substrate were assessed through soil sampling in 2009 and 2011 and plant biomass was determined at study conclusion. Results showed that soil CO2-C efflux was similar among all species and substrates, with few main effects of species or substrate observed throughout the study. Soil analysis showed that plots with pinebark contained higher levels of soil C in both 2009 and 2011, suggesting that pinebark decomposes slower than clean chip residual or WholeTree and consequently has greater C storage potential than the two alternative substrates. Results showed a net C gain for all species and substrate combinations; however, plants grown in pinebark had greater C sequestration potential.

Tillage-induced short-term soil organic matter turnover and respiration

NASA Astrophysics Data System (ADS)

Fiedler, Sebastian Rainer; Leinweber, Peter; Jurasinski, Gerald; Eckhardt, Kai-Uwe; Glatzel, Stephan

2016-09-01

Tillage induces decomposition and mineralisation of soil organic matter (SOM) by the disruption of macroaggregates and may increase soil CO2 efflux by respiration, but these processes are not well understood at the molecular level. We sampled three treatments (mineral fertiliser: MF; biogas digestate: BD; unfertilised control: CL) of a Stagnic Luvisol a few hours before and directly after tillage as well as 4 days later from a harvested maize field in northern Germany and investigated these samples by means of pyrolysis-field ionisation mass spectrometry (Py-FIMS) and hot-water extraction. Before tillage, the Py-FIMS mass spectra revealed differences in relative ion intensities of MF and CL compared to BD most likely attributable to the cattle manure used for the biogas feedstock and to relative enrichments during anaerobic fermentation. After tillage, the CO2 effluxes were increased in all treatments, but this increase was less pronounced in BD. We explain this by restricted availability of readily biodegradable carbon compounds and possibly an inhibitory effect of sterols from digestates. Significant changes in SOM composition were observed following tillage. In particular, lignin decomposition and increased proportions of N-containing compounds were detected in BD. In MF, lipid proportions increased at the expense of ammonia, ammonium, carbohydrates and peptides, indicating enhanced microbial activity. SOM composition in CL was unaffected by tillage. Our analyses provide strong evidence for significant short-term SOM changes due to tillage in fertilised soils.

Contrasting effects of intra- and interspecific identity and richness of ectomycorrhizal fungi on host plants, nutrient retention and multifunctionality.

PubMed

Hazard, Christina; Kruitbos, Laura; Davidson, Hazel; Taylor, Andy F S; Johnson, David

2017-01-01

A major gap in our understanding of biodiversity-ecosystem function relationships concerns the role of intra- and interspecific diversity of mycorrhizal fungi, which are critical for plant fitness, biogeochemical cycling and other processes. Here, we test the hypothesis that the identity and richness of ectomycorrhizal (ECM) fungi at the intra- and interspecific levels affect ecosystem multifunctionality by regulating plant and fungal productivity, soil CO 2 efflux and nutrient retention. Microcosms containing Scots pine (Pinus sylvestris) seedlings colonized by different ECM fungal isolates, in monocultures and mixtures, enabled us to test for both intra- and interspecific identity and richness effects, and transgressive overyielding. Intra- and interspecific identity had modest but significant effects on plant and fungal productivity and nutrient retention, but no effect on CO 2 efflux. Intraspecific richness increased plant root productivity and ECM root tips but decreased hyphal length, whereas interspecific richness had no effects. Interspecific mixtures outperformed the most productive monocultures in only 10% of the cases, compared with 42% for the intraspecific mixtures. Both intra- and interspecific identity and richness of ECM fungi regulate ecosystem multifunctionality, but their effects on the direction and magnitude of individual variables differ. Transgressive overyielding suggests that positive niche complementarity effects are driving some of the responses to intraspecific richness. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Soil Organic Carbon Sources of Respired CO2 in a Mid-successional North Temperate Forest

NASA Astrophysics Data System (ADS)

Medina, N. L.; Hatton, P. J.; Le Moine, J.; Nadelhoffer, K. J.

2015-12-01

Given that soil organic matter (SOM) is the largest global terrestrial carbon (C) pool, some fractions of which have turnover times of centuries to millennia, it is critical to understand the mechanisms by which higher net primary productivity (NPP) and higher litter inputs, in the future, as predicted by some models, might alter the potentials of forest soils to serve as long-term C sinks. Here, we use a 10-year-old site in the DIRT (Detritus Input and Removal Treatments) network of litter manipulations to compare plots in a forested, northern-temperate sandy soil that were subjected to double-leaf-litter additions (DL) and both root- and leaf-litter removals (no inputs, NI) to non-manipulated controls. Previous data show that rather than increasing soil organic carbon (SOC) stocks, plots receiving doubled litter inputs lose SOC at rates similar to losses in Control soils. To trace the source of extra mineralized SOC, we analyzed field CO2 effluxes for δ13C and characterized SOC of varying degrees of organo-mineral association with sequential density fractionations. Soils in DL plots respired significantly faster (p=0.095) and proportionally more (p=0.015) than control soils over the course of July, August, and October 2014. This suggests a greater fresh litter contribution to soil efflux in DL than in Control plots after 10 years of treatment. Preliminary data show that intermediate (1.85 - 2.4 g/mL) and dense (>2.4 g/mL) fractions are relatively larger in DL than in Control soils. This suggests that the addition C from doubled litter could be more rapidly transferred into those more dense fractions, or that higher litter inputs prime the decomposition of lighter particulate SOC forms, leading to a relative increase of the dense organo-mineral associations. Using δ13C values to parameterize a multi-source mixing model, we partition the fate of both fresh litter and partially-decomposed SOC and will present on the modeled relative contributions of various sources to field CO2 effluxes from diverse treatments. Our preliminary data and expected results may suggest important contributions from mineral-associated SOC, rather than simply from free SOC, to seasonal field soil respiration. Thus, with higher litterfall rates, C that similar forest soils sequester may exhibit shorter ecosystem-level residence times.

Oral and inhaled corticosteroids: Differences in P-glycoprotein (ABCB1) mediated efflux

DOE Office of Scientific and Technical Information (OSTI.GOV)

Crowe, Andrew, E-mail: a.p.crowe@curtin.edu.au; Tan, Ai May

There is concern that P-glycoprotein mediated efflux contributes to steroid resistance. Therefore, this study examined bidirectional corticosteroid transport and induction capabilities for P-glycoprotein (P-gp) to understand which of the systemic and inhaled corticosteroids interacted with P-gp to the greatest extent. Hydrocortisone, prednisolone, prednisone, methylprednisolone, and dexamethasone represented systemically active drugs, while fluticasone propionate, beclomethasone dipropionate, ciclesonide and budesonide represented inhaled corticosteroids. Aldosterone and fludrocortisone represented mineralocorticoids. All drugs were detected using individually optimised HPLC protocols. Transport studies were conducted through Caco-2 monolayers. Hydrocortisone and aldosterone had efflux ratios below 1.5, while prednisone showed a P-gp mediated efflux ratio of onlymore » 1.8 compared to its active drug, prednisolone, with an efflux ratio of 4.5. Dexamethasone and beclomethasone had efflux ratios of 2.1 and 3.3 respectively, while this increased to 5.1 for methylprednisolone. Fluticasone showed an efflux ratio of 2.3. Protein expression studies suggested that all of the inhaled corticosteroids were able to induce P-gp expression, from 1.6 to 2 times control levels. Most of the systemic corticosteroids had higher passive permeability (> 20 × 10{sup −6} cm/s) compared to the inhaled corticosteroids (> 5 × 10{sup −6} cm/s), except for budesonide, with permeability similar to the systemic corticosteroids. Inhaled corticosteroids are not transported by P-gp to the same extent as systemic corticosteroids. However, they are able to induce P-gp production. Thus, inhaled corticosteroids may have greater interactions with other P-gp substrates, but P-gp itself is less likely to influence resistance to the drugs. -- Highlights: ► Inhaled corticosteroids are only weak substrates for P-gp, including budesonide. ► Inhaled corticosteroid potent P-gp inducers especially fluticasone and beclomethasone. ► Systemic corticosteroids are weak P-gp inducers. ► Mineralocorticoids not affected by P-gp mediated efflux.« less

Soil CO2 efflux and water use efficiency across diverse cover types in southern Appalachian hardwood forests

Treesearch

Ruba C. Bilal; John R. Seiler; Brian D. Strahm; John A. Peterson

2016-01-01

We are investigating biogeochemical cycling in a mixed hardwood forest in the Ridge and Valley physiographic province in Montgomery County, Virginia. The broad aim of the study is to understand how carbon, water and nutrient cycles vary among diverse stand types in a relatively small spatial area. The specific objectives here are to determine patterns in soil CO2...

Impacts of intensive management and genetic improvement on soil CO2 efflux and carbon cycling in managed loblolly pine forests

Treesearch

Chelsea G. Drum; Eric J. Jokela; Jason G. Vogel; Edward A. G. Schuur; Salvador Gezan

2015-01-01

In the southeastern United States, fertilization and weed control treatments, with deployment of genetically improved seedlings planting stock, are routinely used to increase aboveground productivity (Jokela and others 2004).

Carbon dioxide fluxes from contrasting ecosystems in the Sudanian Savanna in West Africa.

PubMed

Quansah, Emmanuel; Mauder, Matthias; Balogun, Ahmed A; Amekudzi, Leonard K; Hingerl, Luitpold; Bliefernicht, Jan; Kunstmann, Harald

2015-12-01

The terrestrial land surface in West Africa is made up of several types of savanna ecosystems differing in land use changes which modulate gas exchanges between their vegetation and the overlying atmosphere. This study compares diurnal and seasonal estimates of CO 2 fluxes from three contrasting ecosystems, a grassland, a mixture of fallow and cropland, and nature reserve in the Sudanian Savanna and relate them to water availability and land use characteristics. Over the study period, and for the three study sites, low soil moisture availability, high vapour pressure deficit and low ecosystem respiration were prevalent during the dry season (November to March), but the contrary occurred during the rainy season (May to October). Carbon uptake predominantly took place in the rainy season, while net carbon efflux occurred in the dry season as well as the dry to wet and wet to dry transition periods (AM and ND) respectively. Carbon uptake decreased in the order of the nature reserve, a mixture of fallow and cropland, and grassland. Only the nature reserve ecosystem at the Nazinga Park served as a net sink of CO 2 , mostly by virtue of a several times larger carbon uptake and ecosystem water use efficiency during the rainy season than at the other sites. These differences were influenced by albedo, LAI, EWUE, PPFD and climatology during the period of study. These results suggest that land use characteristics affect plant physiological processes that lead to flux exchanges over the Sudanian Savanna ecosystems. It affects the diurnal, seasonal and annual changes in NEE and its composite signals, GPP and RE. GPP and NEE were generally related as NEE scaled with photosynthesis with higher CO 2 assimilation leading to higher GPP. However, CO 2 effluxes over the study period suggest that besides biomass regrowth, other processes, most likely from the soil might have also contributed to the enhancement of ecosystem respiration.

Changes in biocrust cover drive carbon cycle responses to climate change in drylands.

PubMed

Maestre, Fernando T; Escolar, Cristina; de Guevara, Mónica Ladrón; Quero, José L; Lázaro, Roberto; Delgado-Baquerizo, Manuel; Ochoa, Victoria; Berdugo, Miguel; Gozalo, Beatriz; Gallardo, Antonio

2013-12-01

Dryland ecosystems account for ca. 27% of global soil organic carbon (C) reserves, yet it is largely unknown how climate change will impact C cycling and storage in these areas. In drylands, soil C concentrates at the surface, making it particularly sensitive to the activity of organisms inhabiting the soil uppermost levels, such as communities dominated by lichens, mosses, bacteria and fungi (biocrusts). We conducted a full factorial warming and rainfall exclusion experiment at two semiarid sites in Spain to show how an average increase of air temperature of 2-3 °C promoted a drastic reduction in biocrust cover (ca. 44% in 4 years). Warming significantly increased soil CO2 efflux, and reduced soil net CO2 uptake, in biocrust-dominated microsites. Losses of biocrust cover with warming through time were paralleled by increases in recalcitrant C sources, such as aromatic compounds, and in the abundance of fungi relative to bacteria. The dramatic reduction in biocrust cover with warming will lessen the capacity of drylands to sequester atmospheric CO2 . This decrease may act synergistically with other warming-induced effects, such as the increase in soil CO2 efflux and the changes in microbial communities to alter C cycling in drylands, and to reduce soil C stocks in the mid to long term. © 2013 John Wiley & Sons Ltd.

Action of some foreign cations and anions on the chloride permeability of frog muscle

PubMed Central

Hutter, O. F.; Warner, Anne E.

1967-01-01

1. Evidence for the existence in skeletal muscle of a specific cation binding system capable of lowering the chloride permeability was obtained by testing the effect of several metal ion species upon the efflux of 36Cl from frog muscles equilibrated in high-KCl solution. 2. Cu2+, Zn2+ and UO22+ ions, when present in concentrations of approximately 10-4 M in inactive wash solution at pH 7·4 slowed the efflux of 36Cl to half its original value. At pH 5·0, when the chloride permeability was already low as a consequence of hydrogen ion binding, these metal ions had little further effect. 3. Presence of Ni2+, Co2+, Pb2+, Ce3+ and La3+ in 10-4 M or higher concentrations had no detectable influence on the 36Cl efflux. Wide variations in Ca2+ concentration were similarly ineffective. 4. The influence of more adsorbable anions on the chloride permeability was examined at different pH values. Extracellular iodide greatly slowed the rapid efflux of 36Cl into alkaline solution. In acid solutions, when the chloride permeability was already low, the effect of iodide was less pronounced, but still demonstrable. The chloride permeability was consequently increased to a lesser extent by a rise in pH in the presence of iodide. 5. The efflux of iodide and bromide was measured at different pH values under conditions of self exchange. In alkaline solution the permeabilities to iodide and bromide were considerably lower than that to chloride. In acid solution the membrane differentiated less between anion species of different adsorbability. PMID:6040156

Co-formulation of P-glycoprotein Substrate and Inhibitor in Nanocarriers: An Emerging Strategy for Cancer Chemotherapy.

PubMed

Saneja, Ankit; Dubey, Ravindra Dhar; Alam, Noor; Khare, Vaibhav; Gupta, Prem N

2014-01-01

Scientific community is striving to understand the role of P-glycoprotein (P-gp) in drug discovery programs due to its impact on pharmacokinetic and multi-drug resistance (MDR) of anticancer drugs. A number of efforts to resolve the crystal structure and understanding the mechanism of P-gp mediated efflux have been made. Several generations of Pgp inhibitors have been developed to tackle this multi-specific efflux protein. Unfortunately, these inhibitors lack selectivity, exhibit poor solubility and severe pharmacokinetic interactions restricting their clinical use. The nanocarrier drug delivery systems (NDDS) are receiving increasing attention for P-gp modulating activity of pharmaceutical excipients which are used in their fabrication. In addition, NDDS can enhance the solubility and exhibited ability to bypass P-gp mediated efflux. The co-formulation of P-gp inhibitors and substrate anticancer drugs in single drug delivery system offers the advantage of bypassing P-gp mediated drug efflux as well as inhibiting the P-gp. Moreover, severe pharmacokinetic interactions between P-gp inhibitor and substrate anticancer drugs could be avoided by using this strategy. In this article we describe the co-formulation strategies using nanocarriers for modulation of pharmacokinetics as well as multi-drug resistance of anticancer drugs along with the challenges in this area.

Changes in soil CO2 efflux of organic calcaric soils due to disturbance by wind

NASA Astrophysics Data System (ADS)

Mayer, M.; Katzensteiner, K.

2012-04-01

Disturbances such as windthrow or insect infestations are supposed to have a significant influence on the soil carbon balance of affected forests. Increasing soil temperatures and changes in the soil moisture regime, caused by the removed tree layer, are expected to change soil CO2 efflux, also known as soil respiration. Beside an anticipated stimulation of the carbon mineralization, the main part of root allocated CO2 is offset due to the blown down trees. On mountain forest sites of the Northern Limestone Alps, where highly active organic soils above calcareous parent material are characteristic (Folic Histosols and Rendzic Leptosols), an increase of the mineralization rate of carbon may contribute to enormous humus losses. Serious site degradation can be the consequence, especially on south exposed slopes where extreme climatic conditions occur. The present study tries to give insights to disturbance induced changes in temporal and spatial behaviour of soil respiration for a montane mountain forest located in the Northern Limestone Alps of Upper Austria. Soil respiration, soil temperature and volumetric water content were measured on two windthrow areas (blow down dates were 2007 and 2009 respectively) as well as in an adjacent mature mixed forest during the vegetation periods of 2010 and 2011. Soil respiration in both years was mainly driven by soil temperature, which explained up to 90 % of the concerning temporal variation. Volumetric water content had a significant influence as additional temporal driver. After removing the temperature trend, significant differences in basal soil respiration rates were found for the disturbance area and the forest stand. Inter seasonal declines in soil respiration were ascertained for the mature stand as well as for the recent windthrow. Particular decreases are related to drought stress in summer 2011 and a proceeded decomposition of labile soil carbon components at the windthrow site. An interaction between soil type and stratum showed a distinctive decrease in the soil CO2 efflux pattern for organic soils by comparing the recent and old disturbance areas. Such a downward trend was also detected on the more recently disturbed area in the consecutive years. These findings support the assumption that carbon mineralization can account for excessive losses in soil organic carbon after forest disturbance, whereas organic humus soils are supposed to be particularly vulnerable. This study is part of the INTERREG Bayern-Österreich 2007 -2013 project 'SicAlp - Standortssicherung im Kalkalpin' which is funded by the European Regional Development Fund (ERDF) and national funding.

Contrasting genotypes, soil amendments, and their interactive effects on short-term total soil CO2 efflux in a 3-year-old Pinus taeda L

Treesearch

Michael C. Tyree; John R. Seiler; Chris A. Maier

2014-01-01

Intensively managed pine forests in the southeastern United States are considered an important C sink and may play a critical role in offsetting increased global CO2 emissions. The combination of improved silvicultural methods and the use of superior genotypes are estimated to result in future volume gains of up to 60 percent. However to date, no work has looked at...

Complex terrain in the Critical Zone: How topography drives ecohydrological patterns of soil and plant carbon exchange in a semiarid mountainous system

NASA Astrophysics Data System (ADS)

Barron-Gafford, G.; Minor, R. L.; Heard, M. M.; Sutter, L. F.; Yang, J.; Potts, D. L.

2015-12-01

The southwestern U.S. is predicted to experience increasing temperatures and longer periods of inter-storm drought. High temperature and water deficit restrict plant productivity and ecosystem functioning, but the influence of future climate is predicted to be highly heterogeneous because of the complex terrain characteristic of much of the Critical Zone (CZ). Within our Critical Zone Observatory (CZO) in the Southwestern US, we monitor ecosystem-scale carbon and water fluxes using eddy covariance. This whole-ecosystem metric is a powerful integrating measure of ecosystem function over time, but details on spatial heterogeneity resulting from topographic features of the landscape are not captured, nor are interactions among below- and aboveground processes. We supplement eddy covariance monitoring with distributed measures of carbon flux from soil and vegetation across different aspects to quantify the causes and consequences of spatial heterogeneity through time. Given that (i) aspect influences how incoming energy drives evaporative water loss and (ii) seasonality drives temporal patterns of soil moisture recharge, we were able to examine the influence of these processes on CO2 efflux by investigating variation across aspect. We found that aspect was a significant source of spatial heterogeneity in soil CO2 efflux, but the influence varied across seasonal periods. Snow on South-facing aspects melted earlier and yielded higher efflux rates in the spring. However, during summer, North- and South-facing aspects had similar amounts of soil moisture, but soil temperatures were warmer on the North-facing aspect, yielding greater rates of CO2 efflux. Interestingly, aspect did not influence photosynthetic rates. Taken together, we found that physical features of the landscape yielded predictable patterns of levels and phenologies of soil moisture and temperature, but these drivers differentially influenced below- and aboveground sources of carbon exchange. Conducting these spatially distributed measurements are time consuming. Looking forward, we have begun using unmanned aerial vehicles outfitted with thermal and multi-spectral cameras to quantify patterns of water flux, NDVI, needle browning due to moisture stress, and overall phenology in the CZ.

Nitrogen fertilization raises CO2 efflux from inorganic carbon: A global assessment.

PubMed

Zamanian, Kazem; Zarebanadkouki, Mohsen; Kuzyakov, Yakov

2018-07-01

Nitrogen (N) fertilization is an indispensable agricultural practice worldwide, serving the survival of half of the global population. Nitrogen transformation (e.g., nitrification) in soil as well as plant N uptake releases protons and increases soil acidification. Neutralizing this acidity in carbonate-containing soils (7.49 × 10 9  ha; ca. 54% of the global land surface area) leads to a CO 2 release corresponding to 0.21 kg C per kg of applied N. We here for the first time raise this problem of acidification of carbonate-containing soils and assess the global CO 2 release from pedogenic and geogenic carbonates in the upper 1 m soil depth. Based on a global N-fertilization map and the distribution of soils containing CaCO 3 , we calculated the CO 2 amount released annually from the acidification of such soils to be 7.48 × 10 12  g C/year. This level of continuous CO 2 release will remain constant at least until soils are fertilized by N. Moreover, we estimated that about 273 × 10 12  g CO 2 -C are released annually in the same process of CaCO 3 neutralization but involving liming of acid soils. These two CO 2 sources correspond to 3% of global CO 2 emissions by fossil fuel combustion or 30% of CO 2 by land-use changes. Importantly, the duration of CO 2 release after land-use changes usually lasts only 1-3 decades before a new C equilibrium is reached in soil. In contrast, the CO 2 released by CaCO 3 acidification cannot reach equilibrium, as long as N fertilizer is applied until it becomes completely neutralized. As the CaCO 3 amounts in soils, if present, are nearly unlimited, their complete dissolution and CO 2 release will take centuries or even millennia. This emphasizes the necessity of preventing soil acidification in N-fertilized soils as an effective strategy to inhibit millennia of CO 2 efflux to the atmosphere. Hence, N fertilization should be strictly calculated based on plant-demand, and overfertilization should be avoided not only because N is a source of local and regional eutrophication, but also because of the continuous CO 2 release by global acidification. © 2018 John Wiley & Sons Ltd.

Glycyrrhetinic Acid Accelerates the Clearance of Triptolide through P-gp In Vitro.

PubMed

Li, Zhihua; Yan, Miao; Cao, Lingjuan; Fang, Pingfei; Guo, Zhaohui; Hou, Zhenyan; Zhang, Bikui

2017-07-01

Triptolide (TP) is an active ingredient isolated from Tripterygium wilfordii Hook. f. (TWHF), which is a traditional herbal medicine widely used for the treatment of rheumatoid arthritis and autoimmune disease in the clinic. However, its adverse reactions of hepatotoxicity and nephrotoxicity have been frequently reported which limited its clinical application. The aim of this study was to investigate the mechanism of glycyrrhetinic acid (GA) effecting on the elimination of TP in HK-2 cells and the role of the efflux transporters of P-gp and multidrug resistance-associated proteins (MRPs) in this process. An ultra performance liquid chromatography-electrospray ionization-mass spectrometry (UPLC-ESI-MS) analytical method was established to determine the intracellular concentration of TP. In order to study the role of efflux transporters of P-gp and MRPs in GA impacting on the accumulation of TP, the inhibitors of efflux transporters (P-gp: verapamil; MRPs: MK571) were used in this study. The results showed that GA could enhance the elimination of TP and reduce the TP accumulation in HK-2 cells. Verapamil and MK571 could increase the intracellular concentration of TP; in addition, GA co-incubation with verapamil significantly increased the TP cellular concentration compared with the control group. In conclusion, GA could reduce the accumulation of TP in HK-2 cells, which was related to P-gp. This is probably one of the mechanisms that TP combined with GA to detoxify its toxicity. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

Short-term turnover of soil organic matter after tillage proven by Pyrolysis-field ionization MS

NASA Astrophysics Data System (ADS)

Fiedler, Sebastian; Jurasinski, Gerald; Leinweber, Peter; Glatzel, Stephan

2015-04-01

Knowledge about the composition and the turnover dynamics of soil organic matter (SOM) is crucial to the fertility of agricultural soils. Even short-term changes of SOM are of fundamental importance. Tillage changes the decomposition and the mineralisation of SOM. By disrupting macroaggregates, tillage induces an increased turnover and hampers the aggregation of SOM. As a consequence, mineralisation of SOM is stimulated which may imply an additional efflux of CO2 and N2O from soil. Pyrolysis-field ionization mass spectrometry (Py-FIMS) has been developed as a key method for SOM research. This powerful analytical tool allows a rapid, global and objective determination of the majority of chemical compound classes and is an appropriate method for the analysis of even small differences of biogeochemical matters. Hence, Py-FIMS may allow for a precise detection of the turnover of SOM and the involved compounds that are affected by tillage in the short-term. Py-FIMS measurements along with the determination of the CO2 and N2O effluxes from soil after tillage at the same site may give new insights into the compounds of SOM which are mineralised and consequently contribute to fundamental processes such as respiration, nitrification and denitrification. We applied Py-FIMS to soil samples from a stagnic Luvisol taken before and after tillage from a harvested maize field in Northern Germany. The samples were taken from two treatments amended with mineral fertiliser (MF) and biogas residues (BR), respectively, and also from an unfertilised control (UC). Tillage was conducted by disc harrowing, followed by mouldboard ploughing up to 30 cm. Simultaneously the soil efflux of CO2 and N2O was measured with a dynamic chamber technique. Before tillage, the mass spectra showed distinct differences in the relative ion intensities: the BR treatment showed much more volatilised matter during pyrolysis indicating an increased amount of SOM. Furthermore, in this treatment, the proportions of carbohydrates, peptides and N-heterocycles were smaller and those of lipids and sterols had larger values than in the other treatments, most likely attributable to the cattle manure used for the biogas feedstock and to relative enrichments during anaerobic fermentation. Only a few days after tillage significant changes in SOM composition were observed, especially in the BR treatment: the proportions of volatilised matter and the relative signal intensities of carbohydrates, phenols + lignin monomers, N-heterocycles and peptides increased, whereas those of lignin dimers, lipids and sterols decreased. In the MF treatment only an increase of lipid proportions at the expense of carbohydrates was observed. The decrease and the increase of carbohydrates in MF and BR, respectively, were reciprocally correlated with the cumulated CO2 efflux. The N2O efflux increased in MF and BR after tillage, but not in UC. Thus, we were able to show significant changes in the quality of SOM due to tillage confirming the sensitivity of Py-FIMS to detected even short-term changes in SOM composition that could be related to the release of gases from soil.

Determining trace gas efflux from container production of woody nursery crops

USDA-ARS?s Scientific Manuscript database

In recent years, climate change and its effects on the global environment has garnered significant attention from the scientific community. Increased trace gas emissions of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) are widely believed to be the driving force behind global warming. ...

Mode of action of the 2-phenylquinoline efflux inhibitor PQQ4R against Escherichia coli

PubMed Central

Machado, Diana; Fernandes, Laura; Costa, Sofia S.; Cannalire, Rolando; Manfroni, Giuseppe; Tabarrini, Oriana; Couto, Isabel; Sabatini, Stefano

2017-01-01

Efflux pump inhibitors are of great interest since their use as adjuvants of bacterial chemotherapy can increase the intracellular concentrations of the antibiotics and assist in the battle against the rising of antibiotic-resistant bacteria. In this work, we have described the mode of action of the 2-phenylquinoline efflux inhibitor (4-(2-(piperazin-1-yl)ethoxy)-2-(4-propoxyphenyl) quinolone – PQQ4R), against Escherichia coli, by studding its efflux inhibitory ability, its synergistic activity in combination with antibiotics, and compared its effects with the inhibitors phenyl-arginine-β-naphthylamide (PAβN) and chlorpromazine (CPZ). The results showed that PQQ4R acts synergistically, in a concentration dependent manner, with antibiotics known to be subject to efflux in E. coli reducing their MIC in correlation with the inhibition of their efflux. Real-time fluorometry assays demonstrated that PQQ4R at sub-inhibitory concentrations promote the intracellular accumulation of ethidium bromide inhibiting its efflux similarly to PAβN or CPZ, well-known and described efflux pump inhibitors for Gram-negative bacteria and whose clinical usage is limited by their levels of toxicity at clinical and bacteriological effective concentrations. The time-kill studies showed that PQQ4R, at bactericidal concentrations, has a rapid antimicrobial activity associated with a fast decrease of the intracellular ATP levels. The results also indicated that the mode of action of PQQ4R involves the destabilization of the E. coli inner membrane potential and ATP production impairment, ultimately leading to efflux pump inhibition by interference with the energy required by the efflux systems. At bactericidal concentrations, membrane permeabilization increases and finally ATP is totally depleted leading to cell death. Since drug resistance mediated by the activity of efflux pumps depends largely on the proton motive force (PMF), dissipaters of PMF such as PQQ4R, can be regarded as future adjuvants of conventional therapy against E. coli and other Gram-negative bacteria, especially their multidrug resistant forms. Their major limitation is the high toxicity for human cells at the concentrations needed to be effective against bacteria. Their future molecular optimization to improve the efflux inhibitory properties and reduce relative toxicity will optimize their potential for clinical usage against multi-drug resistant bacterial infections due to efflux. PMID:28516003

Mechanism of action of tetrandrine, a natural inhibitor of Candida albicans drug efflux pumps.

PubMed

Zhang, Hong; Gao, Aili; Li, Fengxia; Zhang, Gehua; Ho, Hon In; Liao, Wanqing

2009-05-01

Synergistic effects have previously been observed for a natural compound, tetrandrine (TET), with fluconazole (FLC) in vitro and in the treatment of Candida albicans-infected mice. To investigate the mechanisms of these synergistic effects, 16 strains of C. albicans from the same parent but with different FLC sensitivities were examined using flow cytometry and fluorescent spectrophotometry. Rhodamine 123 (Rh123)-positive cells and intracellular Rh123 fluorescence intensity were determined in accumulation/efflux experiments involving no or a noncytotoxic dose of TET. Total RNA extracted from each strain was used to compare the expressions of drug efflux pump genes in FLC-susceptible, -susceptible dose-dependent, and -resistant strains before and 24 h after TET administration. Accumulation experiments determined that mean percentages of Rh123-positive cells were 26.65% (TET-free) and 70.99% (TET 30 microg/ml), and mean respective intracellular Rh123 fluorescence intensities were 11.34 and 18.00. Efflux experiments showed that percentages of Rh123-positive cells were 1.79% (TET free) and 42.57% (TET 30 microg/ml), respectively, and respective mean intracellular Rh123 fluorescence intensities were 0.74 and 2.19. Differences in MDR1, FLU1, CDR1, and CDR2 expression levels in the absence of TET were statistically significant (p<0.05) between FLC-susceptible, -susceptible dose-dependent, and -resistant strains. Compared with TET-free conditions, 24 h TET-treated strains showed statistically different (p<0.05) expression of MDR1 (FLC-resistant strain), FLU1 (FLC-susceptible dose-dependent and -resistant strains), and CDR1 and CDR2 (FLC-susceptible, -susceptible dose-dependent, and -resistant strains). Thus TET can inhibit the C. albicans drug efflux system and reduce drug efflux. Its mechanism of action is related to the inhibition of expression of the drug efflux pump genes MDR1, FLU1, CDR1, and CDR2.

Comparative effects of auxin and abscisic acid on growth, hydrogen ion efflux and gravitropism in primary roots of maize

NASA Technical Reports Server (NTRS)

Evans, M. L.; Mulkey, T. J.

1984-01-01

In order to test the idea that auxin action on root growth may be mediated by H(+) movement, the correlation of auxin action on growth and H(+) movement in roots was examined along with changes in H(+) efflux patterns associated with the asymmetric growth which occurs during gravitropism. The effects of indoleacetic acid (IAA) and abscisic acid (AbA) on growth, H(+) secretion, and gravitropism in roots were compared. Results show a close correlation existent between H(+) efflux and growth in maize roots. In intact roots there is strong H(+) efflux from the elongation zone. Growth-promoting concentrations of IAA stimulate H(+) efflux. During gravitropism the H(+) efflux from the elongation zone becomes asymmetric; the evidence indicates that auxin redistribution contributes to the development of acid efflux asymmetry. That AbA stimulates root growth is reflected in its ability to stimulate H(+) efflux from apical root segments.

Responses of two nonlinear microbial models to warming and increased carbon input

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Y. P.; Jiang, J.; Chen-Charpentier, Benito

A number of nonlinear microbial models of soil carbon decomposition have been developed. Some of them have been applied globally but have yet to be shown to realistically represent soil carbon dynamics in the field. A thorough analysis of their key differences is needed to inform future model developments. In this paper, we compare two nonlinear microbial models of soil carbon decomposition: one based on reverse Michaelis–Menten kinetics (model A) and the other on regular Michaelis–Menten kinetics (model B). Using analytic approximations and numerical solutions, we find that the oscillatory responses of carbon pools to a small perturbation in theirmore » initial pool sizes dampen faster in model A than in model B. Soil warming always decreases carbon storage in model A, but in model B it predominantly decreases carbon storage in cool regions and increases carbon storage in warm regions. For both models, the CO 2 efflux from soil carbon decomposition reaches a maximum value some time after increased carbon input (as in priming experiments). This maximum CO 2 efflux (F max) decreases with an increase in soil temperature in both models. However, the sensitivity of F max to the increased amount of carbon input increases with soil temperature in model A but decreases monotonically with an increase in soil temperature in model B. These differences in the responses to soil warming and carbon input between the two nonlinear models can be used to discern which model is more realistic when compared to results from field or laboratory experiments. Lastly, these insights will contribute to an improved understanding of the significance of soil microbial processes in soil carbon responses to future climate change.« less

Responses of two nonlinear microbial models to warming and increased carbon input

DOE PAGES

Wang, Y. P.; Jiang, J.; Chen-Charpentier, Benito; ...

2016-02-18

A number of nonlinear microbial models of soil carbon decomposition have been developed. Some of them have been applied globally but have yet to be shown to realistically represent soil carbon dynamics in the field. A thorough analysis of their key differences is needed to inform future model developments. In this paper, we compare two nonlinear microbial models of soil carbon decomposition: one based on reverse Michaelis–Menten kinetics (model A) and the other on regular Michaelis–Menten kinetics (model B). Using analytic approximations and numerical solutions, we find that the oscillatory responses of carbon pools to a small perturbation in theirmore » initial pool sizes dampen faster in model A than in model B. Soil warming always decreases carbon storage in model A, but in model B it predominantly decreases carbon storage in cool regions and increases carbon storage in warm regions. For both models, the CO 2 efflux from soil carbon decomposition reaches a maximum value some time after increased carbon input (as in priming experiments). This maximum CO 2 efflux (F max) decreases with an increase in soil temperature in both models. However, the sensitivity of F max to the increased amount of carbon input increases with soil temperature in model A but decreases monotonically with an increase in soil temperature in model B. These differences in the responses to soil warming and carbon input between the two nonlinear models can be used to discern which model is more realistic when compared to results from field or laboratory experiments. Lastly, these insights will contribute to an improved understanding of the significance of soil microbial processes in soil carbon responses to future climate change.« less

Microbial community dynamics induced by rewetting dry soil: summer precipitation matters

NASA Astrophysics Data System (ADS)

Barnard, Romain; Osborne, Catherine; Firestone, Mary

2015-04-01

The massive soil CO2 efflux associated with rewetting dry soils after the dry summer period significantly contributes to the annual carbon budget of Mediterranean grasslands. Rapid reactivation of soil heterotrophic activity and available carbon are both required to fuel the CO2 pulse. Better understanding of the effects of altered summer precipitation on the metabolic state of indigenous microorganisms may be important in predicting future changes in carbon cycling. We investigated the effects of a controlled rewetting event on the soil CO2 efflux pulse and on the present (DNA-based) and potentially active (rRNA-based) soil bacterial and fungal communities in intact soil cores previously subjected to three different precipitation patterns over four months (full summer dry season, extended wet season, and absent dry season). Phylogenetic marker genes for bacteria (16S) and fungi (28S) were sequenced before and after rewetting, and the abundance of these genes and transcripts was measured. Even after having experienced markedly different antecedent water conditions, the potentially active bacterial communities showed a consistent wet-up response, reflecting contrasting life-strategies for different groups. Moreover, we found a significant positive relation between the extent of change in the structure of the potentially active bacterial community and the magnitude of the CO2 pulse upon rewetting dry soils. We suggest that the duration of severe dry conditions (predicted to change under future climate) is important in conditioning the response potential of the soil bacterial community to wet-up as well as in framing the magnitude of the associated CO2 pulse.

Changing Summer Precipitation Pattern Alters Microbial Community Response to Fall Wet-up in a Mediterranean Soil

NASA Astrophysics Data System (ADS)

Barnard, R. L.; Osborne, C. A.; Firestone, M. K.

2014-12-01

The large soil CO2 efflux associated with rewetting dry soils after the dry summer period significantly contributes to the annual carbon budget of Mediterranean grasslands. Rapid reactivation of soil heterotrophic activity and a pulse of available carbon are both required to fuel the CO2 pulse. Better understanding of the effects of altered summer precipitation on the metabolic state of indigenous microorganisms may be important in predicting future changes in carbon cycling. Here, we investigated the effects of a controlled rewetting event on the soil CO2 efflux pulse and on the present (DNA-based) and potentially active (rRNA-based) soil bacterial and fungal communities in intact soil cores previously subjected to three different precipitation patterns over four months (full summer dry season, extended wet season, and absent dry season). Phylogenetic marker genes for bacteria (16S) and fungi (28S) were sequenced before and after rewetting, and the abundance of these genes and transcripts was measured. Even after having experienced markedly different antecedent water conditions, the potentially active bacterial communities showed a consistent wet-up response. Moreover, we found a significant positive relation between the extent of change in the structure of the potentially active bacterial community and the magnitude of the CO2 pulse upon rewetting dry soils. We suggest that the duration of severe dry conditions (predicted to change under future climate) is important in conditioning the response potential of the soil bacterial community to wet-up as well as in framing the magnitude of the associated CO2 pulse.

Unravelling ecosystem functions at the Amazonia-Cerrado transition: II. Carbon stocks and CO2 soil efflux in cerradão forest undergoing ecological succession

NASA Astrophysics Data System (ADS)

Peixoto, Karine S.; Marimon-Junior, Ben Hur; Marimon, Beatriz S.; Elias, Fernando; de Farias, Josenilton; Freitag, Renata; Mews, Henrique A.; das Neves, Eder C.; Prestes, Nayane Cristina C. S.; Malhi, Yadvinder

2017-07-01

The transition region between two major South American biomes, the Amazon forest and the Cerrado (Brazilian savanna), has been substantially converted into human-modified ecosystems. Nevertheless, the recovery dynamics of ecosystem functions in this important zone of (ecological) tension (ZOT) remain poorly understood. In this study, we compared two areas of cerradão (a forest-woodland of the Brazilian savanna; Portuguese augmentative of cerrado), one in secondary succession (SC) and one adjacent and well preserved (PC), to test whether the ecosystem functions lost after conversion to pasture were restored after 22 years of regeneration. We tested the hypothesis that the increase in annual aboveground biomass in the SC would be greater than that in the PC because of anticipated successional gains. We also investigated soil CO2 efflux, litter layer content, and fine root biomass in both the SC and PC. In terms of biomass recovery our hypothesis was not supported: the biomass did not increase in the successional area over the study period, which suggested limited capacity for recovery in this key ecosystem compartment. By contrast, the structure and function of the litter layer and root mat were largely reconstituted in the secondary vegetation. Overall, we provide evidence that 22 years of secondary succession were not sufficient for these short and open forests (e.g., cerradão) in the ZOT to recover ecosystem functions to the levels observed in preserved vegetation of identical physiognomy.

Effects of media and species on soil CO2 efflux in the landscape

USDA-ARS?s Scientific Manuscript database

Increasing concentrations of greenhouse gases (GHG) including carbon dioxide, methane, and nitrous oxide are widely believed to be the main contributing factors leading to global climate change. The horticulture industry has the potential to improve GHG conditions through sequestering carbon (C) in ...

SOIL CO2 EFFLUX FROM ISOTOPICALLY LABELED BEECH AND SPRUCE IN SOUTHERN GERMANY

EPA Science Inventory

• Carbon acquisition and transport to roots in forest trees is difficult to quantify and is affected by a number of factors, including micrometeorology and anthropogenic stresses. The canopies of mature European beech (Fagus sylvatica) and Norway spruce (Picea abies) were expose...

Photoassimilation, Assimilate Translocation and Plasmodesmal Biogenesis in the Source Leaves of Arabidopsis thaliana Grown Under an Increased Atmospheric CO2 Concentration

PubMed Central

Duan, Zhongrui; Homma, Ayumi; Kobayashi, Megumi; Nagata, Noriko; Kaneko, Yasuko; Fujiki, Yuki; Nishida, Ikuo

2014-01-01

Using 18-day-old Arabidopsis thaliana seedlings grown under increased (780 p.p.m., experimental plants) or ambient (390 p.p.m., control plants) CO2 conditions, we evaluated 14CO2 photoassimilation in and translocation from representative source leaves. The total 14CO2 photoassimilation amounts increased in the third leaves of the experimental plants in comparison with that found for the third leaves of the control plants, but the rates were comparable for the first leaves of the two groups. In contrast, translocation of labeled assimilates doubled in the first leaves of the experimental group, whereas translocation was, at best, passively enhanced even though photoassimilation increased in their third leaves. The transcript levels of the companion cell-specific sucrose:H+ symporter gene SUC2 were not significantly affected in the two groups of plants, whereas those of the sucrose effluxer gene SWEET12 and the sieve element-targeted sucrose:H+ symporter gene SUT4 were up-regulated in the experimental plants, suggesting up-regulation of SUT4-dependent apoplastic phloem loading. Compared with SUC2, SUT4 is a minor component that is expressed in companion cells but functions in sieve elements after transfer through plasmodesmata. The number of aniline blue-stained spots for plasmodesma-associated callose in the midrib wall increased in the first leaf of the experimental plants but was comparable in the third leaf between the experimental and control plants. These results suggest that A. thaliana responds to greater than normal concentrations of CO2 differentially in the first and third leaves in regards to photoassimilation, assimilate translocation and plasmodesmal biogenesis. PMID:24406629

Carbon dioxide emitted from live stems of tropical trees is several years old.

PubMed

Muhr, Jan; Angert, Alon; Negrón-Juárez, Robinson I; Muñoz, Waldemar Alegria; Kraemer, Guido; Chambers, Jeffrey Q; Trumbore, Susan E

2013-07-01

Storage carbon (C) pools are often assumed to contribute to respiration and growth when assimilation is insufficient to meet the current C demand. However, little is known of the age of stored C and the degree to which it supports respiration in general. We used bomb radiocarbon ((14)C) measurements to determine the mean age of carbon in CO2 emitted from and within stems of three tropical tree species in Peru. Carbon pools fixed >1 year previously contributed to stem CO2 efflux in all trees investigated, in both dry and wet seasons. The average age, i.e., the time elapsed since original fixation of CO2 from the atmosphere by the plant to its loss from the stem, ranged from 0 to 6 years. The average age of CO2 sampled 5-cm deep within the stems ranged from 2 to 6 years for two of the three species, while CO2 in the stem of the third tree species was fixed from 14 to >20 years previously. Given the consistency of (14)C values observed for individuals within each species, it is unlikely that decomposition is the source of the older CO2. Our results are in accordance with other studies that have demonstrated the contribution of storage reserves to the construction of stem wood and root respiration in temperate and boreal forests. We postulate the high (14)C values observed in stem CO2 efflux and stem-internal CO2 result from respiration of storage C pools within the tree. The observed age differences between emitted and stem-internal CO2 indicate an age gradient for sources of CO2 within the tree: CO2 produced in the outer region of the stem is younger, originating from more recent assimilates, whereas the CO2 found deeper within the stem is older, fueled by several-year-old C pools. The CO2 emitted at the stem-atmosphere interface represents a mixture of young and old CO2. These observations were independent of season, even during a time of severe regional drought. Therefore, we postulate that the use of storage C for respiration occurs on a regular basis challenging the assumption that storage pools serve as substrates for respiration only during times of limited assimilation.

Polyphenol-rich black chokeberry (Aronia melanocarpa) extract regulates the expression of genes critical for intestinal cholesterol flux in Caco-2 cells.

PubMed

Kim, Bohkyung; Park, Youngki; Wegner, Casey J; Bolling, Bradley W; Lee, Jiyoung

2013-09-01

Black chokeberry (Aronia melanocarpa) is a rich source of polyphenols. The hypolipidemic effects of polyphenol-rich black chokeberry extract (CBE) have been reported, but underlying mechanisms have not been well characterized. We investigated the effect of CBE on the expression of genes involved in intestinal lipid metabolism. Caco-2 cells were incubated with 50 or 100 μg/ml of CBE for 24 h for quantitative realtime polymerase chain reaction analysis. Expression of genes for cholesterol synthesis (3-hydroxy-3-methylglutaryl coenzyme A reductase and sterol regulatory element binding protein 2), apical cholesterol uptake (Niemann-Pick C1 Like 1 and scavenger receptor class B Type 1) and basolateral cholesterol efflux [ATP-binding cassette transporter A1 (ABCA1)] was significantly decreased by CBE compared with control. Western blot analysis confirmed that CBE inhibited expression of these proteins. In contrast, CBE markedly induced mRNA and/or protein levels of ABCG5 and ABCG8 that mediate apical cholesterol efflux to the intestinal lumen. Furthermore, CBE significantly increased mRNA and protein levels of low-density lipoprotein (LDL) receptor, and cellular LDL uptake. Expression of genes involved in lipid metabolism and lipoprotein assembly, including sterol regulatory element-binding protein 1c, fatty acid synthase and acyl-CoA oxidase 1, was significantly decreased by CBE in a dose-dependent manner. Concomitantly, CBE significantly increased sirtuin 1, 3 and 5 mRNA levels, while it decreased SIRT-2. Our data suggest that hypolipidemic effects of CBE may be attributed, at least in part, to increased apical efflux of LDL-derived cholesterol and to decreased chylomicron formation in the intestine; and specific isoforms of SIRT may play an important role in this process. Copyright © 2013 Elsevier Inc. All rights reserved.

A mutant of barley lacking NADH-hydroxypyruvate reductase

DOE Office of Scientific and Technical Information (OSTI.GOV)

Blackwell, R.; Lea, P.

1989-04-01

A mutant of barley, LaPr 88/29, deficient in peroxisomal NADH-hydroxypyruvate reductase (HPR) activity has been identified. Compared to the wild type the activities of NADH-HPR and NADPH-HPR were severely reduced but the mutant was still capable of fixing CO{sub 2} at rates equivalent to 75% of that of the wild type in air. Although lacking an enzyme in the main photorespiratory pathway, there appeared to be little disruption to photorespiratory metabolism as ammonia release, CO{sub 2} efflux and {sup 14}CO{sub 2} release from L-(U-{sup 14}C) serine were similar in both mutant and wild type. LaPr 88/29 has been used tomore » show that NADH-glyoxylate reductase (GR) and NADH-HPR are probably not catalyzed by the same enzyme in barley and that over 80% of the NADPH-HPR activity is due to the NADH-HPR enzyme. Immunological studies, using antibodies raised against spinach HPR, have shown that the NADH-dependent enzyme protein is absent in LaPr 88/29 but there appears to be enhanced synthesis of the NADPH-dependent enzyme protein.« less

Quantifying soil respiration at landscape scales. Chapter 11

Treesearch

John B. Bradford; Michael G. Ryan

2008-01-01

Soil CO2, efflux, or soil respiration, represents a substantial component of carbon cycling in terrestrial ecosystems. Consequently, quantifying soil respiration over large areas and long time periods is an increasingly important goal. However, soil respiration rates vary dramatically in space and time in response to both environmental conditions...

Intercellular transfer of P-glycoprotein from the drug resistant human bladder cancer cell line BIU-87 does not require cell-to-cell contact.

PubMed

Zhou, Hui-liang; Zheng, Yong-jun; Cheng, Xiao-zhi; Lv, Yi-song; Gao, Rui; Mao, Hou-ping; Chen, Qin

2013-09-01

The efflux activity of transmembrane P-glycoprotein prevents various therapeutic drugs from reaching lethal concentrations in cancer cells, resulting in multidrug resistance. We investigated whether drug resistant bladder cancer cells could transfer functional P-glycoprotein to sensitive parental cells. Drug sensitive BIU-87 bladder cancer cells were co-cultured for 48 hours with BIU-87/ADM, a doxorubicin resistant derivative of the same cell line, in a Transwell® system that prevented cell-to-cell contact. The presence of P-glycoprotein in recipient cell membranes was established using fluorescein isothiocyanate, laser scanning confocal microscopy and Western blot. P-glycoprotein mRNA levels were compared between cell types. Rhodamine 123 efflux assay was done to confirm that P-glycoprotein was biologically active. The amount of P-glycoprotein protein in BIU-87 cells co-cultured with BIU-87/ADM was significantly higher than in BIU-87 cells (0.44 vs 0.25) and BIU-87/H33342 cells (0.44 vs 0.26, each p <0.001), indicating P-glycoprotein transfer. P-glycoprotein mRNA expression was significantly higher in BIU-87/ADM cells than in co-cultured BIU-87 cells (1.28 vs 0.30), BIU-87/H33342 (0.28) and BIU-87 cells (0.25, each p <0.001), ruling out a genetic mechanism. After 30 minutes of efflux, rhodamine 123 fluorescence intensity was significantly lower in BIU-87/ADM cells (5.55 vs 51.45, p = 0.004) and co-cultured BIU-87 cells than in BIU-87 cells (14.22 vs 51.45, p <0.001), indicating that P-glycoprotein was functional. Bladder cancer cells can acquire functional P-glycoprotein through a nongenetic mechanism that does not require direct cell contact. This mechanism is consistent with a microparticle mediated process. Copyright © 2013 American Urological Association Education and Research, Inc. Published by Elsevier Inc. All rights reserved.

Nutrient additions to a tropical rain forest drive substantial soil carbon dioxide losses to the atmosphere.

PubMed

Cleveland, Cory C; Townsend, Alan R

2006-07-05

Terrestrial biosphere-atmosphere carbon dioxide (CO(2)) exchange is dominated by tropical forests, where photosynthetic carbon (C) uptake is thought to be phosphorus (P)-limited. In P-poor tropical forests, P may also limit organic matter decomposition and soil C losses. We conducted a field-fertilization experiment to show that P fertilization stimulates soil respiration in a lowland tropical rain forest in Costa Rica. In the early wet season, when soluble organic matter inputs to soil are high, P fertilization drove large increases in soil respiration. Although the P-stimulated increase in soil respiration was largely confined to the dry-to-wet season transition, the seasonal increase was sufficient to drive an 18% annual increase in CO(2) efflux from the P-fertilized plots. Nitrogen (N) fertilization caused similar responses, and the net increases in soil respiration in response to the additions of N and P approached annual soil C fluxes in mid-latitude forests. Human activities are altering natural patterns of tropical soil N and P availability by land conversion and enhanced atmospheric deposition. Although our data suggest that the mechanisms driving the observed respiratory responses to increased N and P may be different, the large CO(2) losses stimulated by N and P fertilization suggest that knowledge of such patterns and their effects on soil CO(2) efflux is critical for understanding the role of tropical forests in a rapidly changing global C cycle.

Controls of Net Ecosystem Exchange at an Old Field, a Pine Plantation, and a Hardwood Forest under Identical Climatic and Edaphic Conditions-Isotopic Studies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chanton, J. P.; Mortazavi, B.

During the past year we have submitted two manuscripts. 1. Mortazavi, B., J. Chanton, J.L. Prater, A.C. Oishi, R. Oren and G. Katul. Temporal variability in 13C of respired CO2 in a pine and a hardwood forest subject to similar climatic conditions (in Press). Oecologia 2. Mortazavi, B. and J. P. Chanton. Use of Keeling plots for determining sources of dissolved organic carbon in nearshore and open ocean systems (Published in Limnology and Oceanography (2004) Vol 49 pages 102-108). 3. Mortazavi, B., J. L. Prater, and J. P. Chanton (2004). A field-based method for simultaneous measurements of the 18O andmore » 13C of soil CO2 efflux. Biogeosciences Vol 1:1-16 Most recent products delivered: Mortazavi, B. and J. P. Chanton. Abiotic and biotic controls on the 13C of respired CO2 in the southeastern US forest mosaics and a new technique for measuring the of soil CO2 efflux. Joint Biosphere Stable Isotope Network (US) and Stable Isotopes in Biosphere Atmosphere Exchange (EU) 2004 Meeting, Interlaken, Switzerland, March 31-April 4, 2004. Mortazavi, B., J. Chanton, J.L. Prater, A.C. Oishi, R. Oren and G. Katul. Temporal variability in 13C of respired CO2 in a pine and a hardwood forest subject to similar climatic conditions. American Geophysical Union Fall Meeting, San Francisco, USA, December 8-12, 2003. Prater, J., Mortazavi, B. and J. P. Chanton. Measurement of discrimination against 13C during photosynthesis and quantification of the short-term variability of 13C over a diurnal cycle. American Geophysical Union Fall Meeting, San Francisco, USA, December 8-12, 2003.« less

Biotic and abiotic controls on diurnal fluctuations in labile soil phosphorus of a wet tropical forest.

PubMed

Vandecar, Karen L; Lawrence, Deborah; Wood, Tana; Oberbauer, Steven F; Das, Rishiraj; Tully, Katherine; Schwendenmann, Luitgard

2009-09-01

The productivity of many tropical wet forests is generally limited by bioavailable phosphorus (P). Microbial activity is a key regulator of P availability in that it determines both the supply of P through organic matter decomposition and the depletion of bioavailable P through microbial uptake. Both microbial uptake and mineralization occur rapidly, and their net effect on P availability varies with soil moisture, temperature, and soil organic matter quantity and quality. Exploring the mechanisms driving P availability at fine temporal scales can provide insight into the coupling of carbon, water, and nutrient cycles, and ultimately, the response of tropical forests to climate change. Despite the recognized importance of P cycling to the dynamics of wet tropical forests and their potential sensitivity to short-term fluctuations in bioavailable P, the diurnal pattern of P remains poorly understood. This study quantifies diurnal fluctuations in labile soil P and evaluates the importance of biotic and abiotic factors in driving these patterns. To this end, measurements of labile P were made every other hour in a Costa Rican wet tropical forest oxisol. Spatial and temporal variation in Bray-extractable P were investigated in relation to ecosystem carbon flux, soil CO2 efflux, soil moisture, soil temperature, solar radiation, and sap-flow velocity. Spatially averaged bi-hourly (every two hours) labile P ranged from 0.88 to 2.48 microg/g across days. The amplitude in labile P throughout the day was 0.61-0.82 microg/g (41-54% of mean P concentrations) and was characterized by a bimodal pattern with a decrease at midday. Labile P increased with soil CO2 efflux and soil temperature and declined with increasing sap flow and solar radiation. Together, soil CO2 efflux, soil temperature, and sap flow explained 86% of variation in labile P.

Spatiotemporal variability of carbon dioxide and methane in a eutrophic lake

NASA Astrophysics Data System (ADS)

Loken, Luke; Crawford, John; Schramm, Paul; Stadler, Philipp; Stanley, Emily

2017-04-01

Lakes are important regulators of global carbon cycling and conduits of greenhouse gases to the atmosphere; however, most efflux estimates for individual lakes are based on extrapolations from a single location. Within-lake variability in carbon dioxide (CO2) and methane (CH4) arises from differences in water sources, physical mixing, and local transformations; all of which can be influenced by anthropogenic disturbances and vary at multiple temporal and spatial scales. During the 2016 open water season (March - December), we mapped surface water concentrations of CO2 and CH4 weekly in a eutrophic lake (Lake Mendota, WI, USA), which has a predominately agricultural and urban watershed. In total we produced 26 maps of each gas based on 10,000 point measurements distributed across the lake surface. Both gases displayed relatively consistent spatial patterns over the stratified period but exhibited remarkable heterogeneity on each sample date. CO2 was generally undersaturated (global mean: 0.84X atmospheric saturation) throughout the lake's pelagic zone and often differed near river inlets and shorelines. The lake was routinely extremely supersaturated with CH4 (global mean: 105X atmospheric saturation) with greater concentrations in littoral areas that contained organic-rich sediments. During fall mixis, both CO2 and CH4 increased substantially, and concentrations were not uniform across the lake surface. CO2 and CH4 were higher on the upwind side of the lake due to upwelling of enriched hypolimnetic water. While the lake acted as a modest sink for atmospheric CO2 during the stratified period, the lake released substantial amounts of CO2 during turnover and continually emitted CH4, offsetting any reduction in atmospheric warming potential from summertime CO2 uptake. These data-rich maps illustrate how lake-wide surface concentrations and lake-scale efflux estimates based on single point measurements diverge from spatially weighted calculations. Both gases are not well represented by a sample collected at lake's central buoy, and thus, extrapolations from a single sampling location may not be adequate to assess lake-wide CO2 and CH4 dynamics in human-dominated landscapes.

Greenhouse gas emissions from waste stabilisation ponds in Western Australia and Quebec (Canada).

PubMed

Glaz, Patricia; Bartosiewicz, Maciej; Laurion, Isabelle; Reichwaldt, Elke S; Maranger, Roxane; Ghadouani, Anas

2016-09-15

Waste stabilisation ponds (WSPs) are highly enriched environments that may emit large quantities of greenhouse gases (GHG), including CO2, CH4 and N2O. However, few studies provide detailed reports on these emissions. In the present study, we investigated GHG emissions from WSPs in Western Australia and Quebec, Canada, and compared emissions to WSPs from other climatic regions and to other types of aquatic ecosystems. Surface water GHG concentrations were related to phytoplankton biomass and nutrients. The CO2 was either emitted or absorbed by WSPs, largely as a function of phytoplankton dynamics and strong stratification in these shallow systems, whereas efflux of CH4 and N2O to the atmosphere was always observed albeit with highly variable emission rates, dependent on treatment phase and time of the day. The total global warming potential index (GWP index, calculated as CO2 equivalent) of emitted GHG from WSPs in Western Australia averaged 12.8 mmol m(-2) d(-1) (median), with CO2, CH4 and N2O respectively contributing 0%, 96.7% and 3.3% of the total emissions, while in Quebec WSPs this index was 194 mmol m(-2) d(-1), with a relative contribution of 93.8, 3.0 and 3.2% respectively. The CO2 fluxes from WSPs were of the same order of magnitude as those reported in hydroelectric reservoirs and constructed wetlands in tropical climates, whereas CH4 fluxes were considerably higher compared to other aquatic ecosystems. N2O fluxes were in the same range of values reported for WSPs in subtropical climate. Copyright © 2016 Elsevier Ltd. All rights reserved.

The "Escarot" gas seep, French Massif Central: CO2 discharge from a quiescent volcanic system - Characterization and quantification of gas emissions

NASA Astrophysics Data System (ADS)

Gal, F.; Leconte, S.; Gadalia, A.

2018-03-01

Natural CO2 emissions from the volcanic rocks of the French Massif Central are poorly constrained. It is of interest better to assess the emission of such non-anthropogenic gases that may significantly contribute to the global carbon budget. We quantified the CO2 emissions to the atmosphere in a small area (0.052 km2) located in the Massif Central close to Lake Pavin, the most recent volcanic edifice in metropolitan France. The specific character of this area, known as the Escarot mofette, was earlier studied for soil-gas concentrations only. In June 2017, we used the accumulation chamber method for measuring CO2 flux and related O2 depletion in the gases emitted at the soil/atmosphere interface, resulting in 176 data acquisitions over four days. In addition, 44 soil-gas concentration measurements were made at selected locations. CO2 emission rates are estimated at 8100 ± 1800 tons/year of deep-seated CO2 and at 660 ± 440 tons/year of biologically produced CO2. The uncertainty on these evaluations comes from the high-frequency variability of CO2 efflux in the more emissive areas and from the occurrence of heavy precipitation events. Though unexpected, these events were used for quantifying the decreases in CO2 efflux, which were as high as 500% over a few hours or even days in some locations. However, repeat acquisitions performed under more favourable weather conditions showed errors of commonly accepted amplitude (±15%). The area showed several degassing centres aligned along a NNW-SSE direction that correlates well with known geological structures, proving the ability of soil-gas methods to map hidden faults. The whole area is characterized by strong CO2 enrichment and related O2 depletion, but it is nonetheless possible to detect areas influenced by the rise of deep-seated gases and a few peripheral areas where biological processes dominate (CO2 up to 10% vol.). This study of gas emissions in a non-urban area also provides complementary information that is of use when extrapolated to similar structures in urban areas, where the occurrence of such gas releases, and its potential hazard may be more difficult to assess.

Secretin stimulates HCO3(-) and acetate efflux but not Na+/HCO3(-) uptake in rat pancreatic ducts.

PubMed

Novak, I; Christoffersen, B C

2001-03-01

Pancreatic ducts secrete HCO3(-), but transport mechanisms are unresolved and possibly vary between species. Our aim was to study the intracellular pH (pHi) regulation and thus H+/HCO3- transport in rat pancreatic ducts. Of particular interest was the Na+/HCO3(-) cotransporter, thought to be important in HCO3(-) -transporting epithelia. pHi was measured with BCECF in freshly isolated intralobular ducts. A reduction in extracellular Na+ concentration or application of HOE 694 (1 microM) decreased pHi by 0.1 to 0.6 pH units, demonstrating Na+/H+ exchanger activity. A reduction in extracellular Cl- concentration or addition of H2DIDS (10 microM) increased pHi by 0.1 to 0.5 pH units, demonstrating Cl-/ HCO(3)- (OH ) exchanger activity. In experimental acidosis, extracellular HCO3(-)/CO2 buffer did not increase the rate of pHi recovery, indicating that provision of HCO3(-) by the Na+/HCO3(-) cotransporter was not apparent. Most importantly, Na+/HCO3(-) cotransport was not stimulated by secretin (1 nM). In contrast, in experimental alkalosis the pHi recovery was increased in HCO3(-)/CO2 buffer, possibly due to Na+/HCO3(-) cotransport in the efflux mode. Secretin (1 nM) and carbachol (1 microM) stimulated HCO3(-) efflux, which can account for the observed HCO3(-) concentrations in rat pancreatic juice. Acetate and HCO3(-) buffers were handled similarly, indicating similar transport mechanisms in pancreatic ducts.

Montelukast is a potent and durable inhibitor of multidrug resistance protein 2 (MRP2)-mediated efflux of taxol and saquinavir

PubMed Central

Roy, Upal; Chakravarty, Geetika; Honer Zu Bentrup, Kerstin; Mondal, Debasis

2009-01-01

The ATP binding cassette (ABC)-transporters are energy dependent efflux pumps which regulate the pharmacokinetics of both anti-cancer chemotherapeutic agents, e.g. taxol, and of HIV-1 protease inhibitors (HPIs), e.g. saquinavir. Increased expression of several ABC-transporters, especially P-gp and MRP2, are observed in multidrug resistant (MDR) tumor cells and on HIV-1 infected lymphocytes. In addition, due to their apical expression on vascular endothelial barriers, both P-gp and MRP2 are of crucial importance towards dictating drug access into sequestered tissues. However, although a number of P-gp inhibitors are currently in clinical trials, possible inhibitors of MRP2 are not being thoroughly investigated. The experimental leukotriene receptor antagonist (LTRA), MK-571 is known to be a potent inhibitor of MRP transporters. Using the MRP2 over-expressing cell line, MDCKII-MRP2, we evaluated whether the clinically approved LTRAs, e.g. montelukast (Singulair™) and zafirlukast (Accolate™), can similarly suppress MRP2-mediated efflux. We compared the efficacy of increasing concentrations (20-100 μM) of MK-571, montelukast, and zafirlukast, in suppressing the efflux of calcein-AM, a fluorescent MRP substrate, and the radiolabeled [3H-] drugs, taxol and saquinavir. Montelukast was the most potent inhibitor (p<0.01) of MRP2-mediated efflux of all three substrates. Montelukast also increased (p<0.01) the duration of intracellular retention of both taxol and saquinavir. More than 50% of the drugs were retained in cells even after 90 mins post removal of montelukast from the medium. Our findings implicate that montelukast, a relatively safe anti-asthmatic agent, may be used as an adjunct therapy to suppress the efflux of taxol and saquinavir from MRP2 overexpressing cells. PMID:19952419

Quantification of Greenhouse Gas Emissions from the Predisposal Stage of Municipal Solid Waste Management.

PubMed

Zhou, Chuanbin; Jiang, Daqian; Zhao, Zhilan

2017-01-03

Municipal solid waste (MSW) disposal represents one of the largest sources of anthropogenic greenhouse gas (GHG) emissions. However, the biogenic GHG emissions in the predisposal stage of MSW management (i.e., the time from waste being dropped off in community or household garbage bins to being transported to disposal sites) are excluded from the IPCC inventory methodology and rarely discussed in academic literature. Herein, we quantify the effluxes of carbon dioxide (CO 2 ), methane (CH 4 ), and nitrous oxide (N 2 O) from garbage bins in five communities along the urban-rural gradient in Beijing in four seasons. We find that the annual average CO 2 , CH 4 , and N 2 O effluxes in the predisposal stage were (1.6 ± 0.9)10 3 , 0.049 ± 0.016, and 0.94 ± 0.54 mg kg -1 h -1 (dry matter basis) and had significant seasonal differences (24- to 159-fold) that were strongly correlated with temperature. According to our estimate, the N 2 O emission in the MSW predisposal stage amounts to 20% of that in the disposal stage in Beijing, making the predisposal stage a nontrivial source of waste-induced N 2 O emissions. Furthermore, the CO 2 and CH 4 emissions in the MSW predisposal account for 5% (maximum 10% in summer) of the total carbon contents in a Beijing's household food waste stream, which has significance in the assessment of MSW-related renewable energy potential and urban carbon cycles.

Plaque-hyaluronidase-responsive high-density-lipoprotein-mimetic nanoparticles for multistage intimal-macrophage-targeted drug delivery and enhanced anti-atherosclerotic therapy

PubMed Central

Zhang, Mengyuan; He, Jianhua; Jiang, Cuiping; Zhang, Wenli; Yang, Yun; Wang, Zhiyu; Liu, Jianping

2017-01-01

Increasing evidence has highlighted the pivotal role that intimal macrophage (iMΦ) plays in the pathophysiology of atherosclerotic plaques, which represents an attractive target for atherosclerosis treatment. In this work, to address the insufficient specificity of conventional reconstituted high-density lipoprotein (rHDL) for iMΦ and its limited cholesterol efflux ability, we designed a hyaluronan (HA)-anchored core–shell rHDL. This nanoparticle achieved efficient iMΦ-targeted drug delivery via a multistage-targeting approach, and excellent cellular cholesterol removal. It contained a biodegradable poly (lactic-co-glycolic acid) (PLGA) core within a lipid bilayer, and apolipoprotein A-I (apoA-I) absorbing on the lipid bilayer was covalently decorated with HA. The covalent HA coating with superior stability and greater shielding was favorable for not only minimizing the liver uptake but also facilitating the accumulation of nanoparticles at leaky endothelium overexpressing CD44 receptors in atherosclerotic plaques. The ultimate iMΦ homing was achieved via apoA-I after HA coating degraded by hyaluronidase (HAase) (abundant in atherosclerotic plaque). The multistage-targeting mechanism was revealed on the established injured endothelium–macrophage co-culture dynamic system. Upon treatment with HAase in vitro, the nanoparticle HA-(C)-PLGA-rHDL exhibited a greater cholesterol efflux capacity compared with conventional rHDL (2.43-fold). Better targeting efficiency toward iMΦ and attenuated liver accumulation were further proved by results from ex vivo imaging and iMΦ-specific fluorescence localization. Ultimately, HA-(C)-PLGA-rHDL loaded with simvastatin realized the most potent anti-atherogenic efficacies in model animals over other preparations. Thus, the HAase-responsive HDL-mimetic nanoparticle was shown in this study to be a promising nanocarrier for anti-atherogenic therapy, in the light of efficient iMΦ-targeted drug delivery and excellent function of mediating cellular cholesterol efflux. PMID:28144137

Timing and magnitude of C partitioning through a young loblolly pine (Pinus taeda L.) stand using 13C labeling and shade treatments.

PubMed

Warren, J M; Iversen, C M; Garten, C T; Norby, R J; Childs, J; Brice, D; Evans, R M; Gu, L; Thornton, P; Weston, D J

2012-06-01

The dynamics of rapid changes in carbon (C) partitioning within forest ecosystems are not well understood, which limits improvement of mechanistic models of C cycling. Our objective was to inform model processes by describing relationships between C partitioning and accessible environmental or physiological measurements, with a special emphasis on short-term C flux through a forest ecosystem. We exposed eight 7-year-old loblolly pine (Pinus taeda L.) trees to air enriched with (13)CO(2) and then implemented adjacent light shade (LS) and heavy shade (HS) treatments in order to manipulate C uptake and flux. The impacts of shading on photosynthesis, plant water potential, sap flow, basal area growth, root growth and soil CO(2) efflux rate (CER) were assessed for each tree over a 3-week period. The progression of the (13)C label was concurrently tracked from the atmosphere through foliage, phloem, roots and surface soil CO(2) efflux. The HS treatment significantly reduced C uptake, sap flow, stem growth and fine root standing crop, and resulted in greater residual soil water content to 1 m depth. Soil CER was strongly correlated with sap flow on the previous day, but not the current day, with no apparent treatment effect on the relationship. Although there were apparent reductions in new C flux belowground, the HS treatment did not noticeably reduce the magnitude of belowground autotrophic and heterotrophic respiration based on surface soil CER, which was overwhelmingly driven by soil temperature and moisture. The (13)C label was immediately detected in foliage on label day (half-life = 0.5 day), progressed through phloem by Day 2 (half-life = 4.7 days), roots by Days 2-4, and subsequently was evident as respiratory release from soil which peaked between Days 3 and 6. The δ(13)C of soil CO(2) efflux was strongly correlated with phloem δ(13)C on the previous day, or 2 days earlier. While the (13)C label was readily tracked through the ecosystem, the fate of root C through respiratory, mycorrhizal or exudative release pathways was not assessed. These data detail the timing and relative magnitude of C flux through various components of a young pine stand in relation to environmental conditions.

Soil respiration in tropical seasonal forest of Southern Vietnam

NASA Astrophysics Data System (ADS)

Avilov, Vitaly; Anichkin, Alexandr; Descherevskaya, Olga; Evdokimova, Elena; Nguyen Van, Thinh; Novichonok, Artyom; Do Phong, Luu; Kurbatova, Julia; Lopes de Gerenyu, Valentin

2013-04-01

Soil respiration was monitored as a part of a complex research of carbon balance in Nam Cat Tien National Park in Southern Vietnam (NCT site in AsiaFlux index). The study area is described as a tropical monsoon valley tall-stand forest at altitude about 156 m above sea level, mean annual air temperature is 26.2°C, with fluctuations of monthly averaged temperatures within 4°C; mean annual precipitation is 2470 mm with a distinct alternation of wet and dry seasons (Dong Phu weather station, 1976-1990). Measurements were made every 10-15 days during year 2012 at 6 plots that differ in soil and forest type, mostly in Lagerstroemia- or Dipterocarpus-dominated tree stands. Five chambers Ø162 mm were installed at each plot. CO2 concentration was defined with LI-820 gas analyser and 20 ml syringes (three syringes/samples per chamber) up to August 2012, and by means of closed-loop continuous field analysis from August on. Our studies have shown significant temporal and spatial variability of soil respiration in tropical rainforest. Namely, highest annual CO2 efflux rates were calculated for cambisols under lagerstroemia-dominated tree stand and for light sandy fluvisols under dipterocarpus-dominated tree stand (1694.3±546.0 and 1628.1±442.7 gC•m-2•y-1 respectively). Noteworthy is that the content of organic carbon in these soils varies utterly. Lowest annual CO2 efflux rate was calculated for clay-slate leptosols under dipterocarpus-dominated tree stand (972.7±716.5 gC•m-2•y-1). We also observed a significant impact of termites activity on site-scale spatial variability of soil respiration. Seasonal patterns of soil respiration rates were conformed for all plots except one on sandy soils. The beginning of rainy season in April did not result in higher soil respiration rates, but rates did rise in August - October, at the end of rainy season. Apparently this pattern is related to the accumulation of decomposed organic matter in soil and to the deficient aeration caused by high water table at the peak of wet season. On sandy fluvisols CO2 efflux rates were high throughout the whole length of rainy season.

Differential response of hexaploid and tetraploid wheat to interactive effects of elevated [CO2] and low phosphorus.

PubMed

Pandey, Renu; Lal, Milan Kumar; Vengavasi, Krishnapriya

2018-06-04

Hexaploid wheat is more responsive than tetraploid to the interactive effects of elevated [CO 2 ] and low P in terms of carboxylate efflux, enzyme activity and gene expression (TaPT1 and TaPAP). Availability of mineral nutrients to plants under changing climate has become a serious challenge to food security and economic development. An understanding of how elevated [CO 2 ] influences phosphorus (P) acquisition processes at the whole-plant level would be critical in selecting cultivars as well as to maintain optimum yield in limited-P conditions. Wheat (Triticum aestivum and T. durum) grown hydroponically with sufficient and low P concentration were exposed to elevated and ambient [CO 2 ]. Improved dry matter partitioning towards root resulted in increased root-to-shoot ratio, root length, volume, surface area, root hair length and density at elevated [CO 2 ] with low P. Interaction of low P and [CO 2 ] induced activity of enzymes (phosphoenolpyruvate carboxylase, malate dehydrogenase and citrate synthase) in root tissue resulting in twofold increase in carboxylates and acid phosphatase exudation. Physiological absorption capacity of roots showed that plants alter their uptake kinetics by increasing affinity (low K m ) in response to elevated [CO 2 ] under low P supply. Increased relative expression of genes, purple acid phosphatase (TaPAP) and high-affinity Pi transporter (TaPT1) in roots induced by elevated [CO 2 ] and low P supported our physiological observations. Hexaploid wheat (PBW-396) being more responsive to elevated [CO 2 ] at low P supply as compared to tetraploid (PDW-233) necessitates the ploidy effect to be explored further which might be advantageous under changing climate.

Stem CO2 efflux in six co-occurring tree species: underlying factors and ecological implications.

PubMed

Rodríguez-Calcerrada, Jesús; López, Rosana; Salomón, Roberto; Gordaliza, Guillermo G; Valbuena-Carabaña, María; Oleksyn, Jacek; Gil, Luis

2015-06-01

Stem respiration plays a role in species coexistence and forest dynamics. Here we examined the intra- and inter-specific variability of stem CO2 efflux (E) in dominant and suppressed trees of six deciduous species in a mixed forest stand: Fagus sylvatica L., Quercus petraea [Matt.] Liebl, Quercus pyrenaica Willd., Prunus avium L., Sorbus aucuparia L. and Crataegus monogyna Jacq. We conducted measurements in late autumn. Within species, dominants had higher E per unit stem surface area (Es ) mainly because sapwood depth was higher than in suppressed trees. Across species, however, differences in Es corresponded with differences in the proportion of living parenchyma in sapwood and concentration of non-structural carbohydrates (NSC). Across species, Es was strongly and NSC marginally positively related with an index of drought tolerance, suggesting that slow growth of drought-tolerant trees is related to higher NSC concentration and Es . We conclude that, during the leafless period, E is indicative of maintenance respiration and is related with some ecological characteristics of the species, such as drought resistance; that sapwood depth is the main factor explaining variability in Es within species; and that the proportion of NSC in the sapwood is the main factor behind variability in Es among species. © 2014 John Wiley & Sons Ltd.

Oleoyl Coenzyme A Regulates Interaction of Transcriptional Regulator RaaS (Rv1219c) with DNA in Mycobacteria*

PubMed Central

Turapov, Obolbek; Waddell, Simon J.; Burke, Bernard; Glenn, Sarah; Sarybaeva, Asel A.; Tudo, Griselda; Labesse, Gilles; Young, Danielle I.; Young, Michael; Andrew, Peter W.; Butcher, Philip D.; Cohen-Gonsaud, Martin; Mukamolova, Galina V.

2014-01-01

We have recently shown that RaaS (regulator of antimicrobial-assisted survival), encoded by Rv1219c in Mycobacterium tuberculosis and by bcg_1279c in Mycobacterium bovis bacillus Calmette-Guérin, plays an important role in mycobacterial survival in prolonged stationary phase and during murine infection. Here, we demonstrate that long chain acyl-CoA derivatives (oleoyl-CoA and, to lesser extent, palmitoyl-CoA) modulate RaaS binding to DNA and expression of the downstream genes that encode ATP-dependent efflux pumps. Moreover, exogenously added oleic acid influences RaaS-mediated mycobacterial improvement of survival and expression of the RaaS regulon. Our data suggest that long chain acyl-CoA derivatives serve as biological indicators of the bacterial metabolic state. Dysregulation of efflux pumps can be used to eliminate non-growing mycobacteria. PMID:25012658

Oleoyl coenzyme A regulates interaction of transcriptional regulator RaaS (Rv1219c) with DNA in mycobacteria.

PubMed

Turapov, Obolbek; Waddell, Simon J; Burke, Bernard; Glenn, Sarah; Sarybaeva, Asel A; Tudo, Griselda; Labesse, Gilles; Young, Danielle I; Young, Michael; Andrew, Peter W; Butcher, Philip D; Cohen-Gonsaud, Martin; Mukamolova, Galina V

2014-09-05

We have recently shown that RaaS (regulator of antimicrobial-assisted survival), encoded by Rv1219c in Mycobacterium tuberculosis and by bcg_1279c in Mycobacterium bovis bacillus Calmette-Guérin, plays an important role in mycobacterial survival in prolonged stationary phase and during murine infection. Here, we demonstrate that long chain acyl-CoA derivatives (oleoyl-CoA and, to lesser extent, palmitoyl-CoA) modulate RaaS binding to DNA and expression of the downstream genes that encode ATP-dependent efflux pumps. Moreover, exogenously added oleic acid influences RaaS-mediated mycobacterial improvement of survival and expression of the RaaS regulon. Our data suggest that long chain acyl-CoA derivatives serve as biological indicators of the bacterial metabolic state. Dysregulation of efflux pumps can be used to eliminate non-growing mycobacteria. © 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Observed anomalous changes on diffuse CO2 emission at the summit crater of Teide volcano (Tenerife, Canary Islands, Spain): a geochemical evidence of volcanic unrest?

NASA Astrophysics Data System (ADS)

Perez, N. M.; Melián, G.; Asensio-Ramos, M.; Padrón, E.; Alonso Cótchico, M.; Hernández, P. A.; Rodríguez, F.; D'Auria, L.; García-Merino, M.; Padilla, G. D.; Burns, F.; Amonte, C.; García, E.; García-Hernández, R.; Barrancos, J.; Morales-Ocaña, C.; Calvo, D.; Vela, V.; Pérez, A.

2017-12-01

Tenerife (2034 km2) is the largest of the Canary Islands and hosts a central volcanic complex, Las Cañadas, which is characterized by the eruption of differentiated magmas. Laying inside Las Cañadas a twin stratovolcanoes system Pico Viejo and Teide, has been developed. Although Teide volcano shows weak fumarolic system, volcanic gas emissions observed in the summit area are mainly controlled by high rates of diffuse CO2 degassing. Soil CO2 efflux surveys have been performed at the summit crater of Teide volcano since 1999 according to the accumulation chamber method to monitor changes of volcanic activity. Soil CO2 efflux and soil temperature have been measured in sites homogeneously distributed within an area of about 6,972 m2 inside the summit crater. Historical seismic activity in Tenerife has been mainly characterized by low- to moderate-magnitude events (M <2.5), and most of epicenters clustered in an offshore area SE of Tenerife. Very few earthquakes have occurred in other areas, including Teide volcano. Since November 2016 more than 100 small magnitude earthquakes, with typical features of the microseismicity of hydrothermal systems, at depths usually ranging between 5 and 15 km located beneath Teide volcano have been recorded. On January 6th 2017 a M=2.5 earthquake was recorded in the area, being one of the strongest events recorded since 2004. Between October 11 and December 13, 2016, a continuous increase on the diffuse CO2 emission was registered preceding the occurrence of the 2.5 seismic event, from 21.3±2.0 to 101.7±20.7 t d-1. In Febraury 2017, the diffuse CO2 emission rate showed a maximum value (176±35 t/d) and has remained at relatively high values in the range 67-176 t/d. The observed increase on the diffuse CO2 emission, likely due to the increase of fluid pressure in the hydrothermal-magmatic system of Tenerife, might be a geochemical evidence of a future volcanic unrest at Tenerife Island.

High Resolution Measurement of Rhizosphere Priming Effects and Temporal Variability of CO2 Fluxes under Zea Mays

NASA Astrophysics Data System (ADS)

Splettstößer, T.; Pausch, J.

2016-12-01

Plant induced increase of soil organic matter turnover rates contribute to carbon emissions in agricultural land use systems. In order to better understand these rhizosphere priming effects, we conducted an experiment, which enabled us to monitor CO2 fluxes under zea mays plants with high resolution. The experiment was conducted in a climate chamber where the plants were grown in thin, tightly sealed boxes for 40 days and CO2 efflux from soil was measured twice a day. 13C-CO2 was introduced to allow differentiation between plant and soil derived CO2.This enabled us to monitor root respiration and soil organic matter turnover in the early stages of plant growth and to highlight changes in soil CO2 emissions and priming effects between day and night. The measurements were conducted with a PICARRO G2131-I δ13C high-precision isotopic CO2 Analyzer (PICARRO INC.) utilizing an automated valve system governed by a CR1000 data logger (Campbell Scientific). After harvest roots and shoots were analyzed for 13C content. Microbial biomass, root length density and enzymatic activities in soil were measured and linked to soil organic matter turnover rates. In order to visualize the spatial distribution of carbon allocation to the root system a few plants were additionally labeled with 14C and 14C distribution was monitored by 14C imaging of the root systems over 4 days. Based on the 14C distribution a grid was chosen and the soil was sampled from each square of the grid to investigate the impact of carbon allocation hotspots on enzymatic activities and microbial biomass. First initial results show an increase of soil CO2 efflux in the night periods, whereby the contribution of priming is not fully analyzed yet. Additionally, root tips were identified as hotspots of short term carbon allocation via 14C imaging and an in increase in microbial biomass could be measured in this regions. The full results will be shown at AGU 2016.

A multichannel automated chamber system for continuous measurement of forest soil CO2 efflux.

PubMed

Liang, Naishen; Inoue, Gen; Fujinuma, Yasumi

2003-08-01

We developed a fast-response multi-chamber system for measuring soil-surface CO2 efflux (Fc). The chambers (90 x 90 x 50 cm, L x W x H) had lids that opened and closed automatically, and were connected in parallel to a single CO2 analyzer equipped with a 16-channel gas sampler. Between measurements the chamber lids were raised to allow precipitation and leaf litter to reach the enclosed soil surface. When a chamber was closed, it was ventilated with well-buffered ambient air (125 l min-1) that entered by an inlet on one chamber sidewall and exited through a large vent on the opposite sidewall. The pressure difference between the inside and outside of the chamber was less than 0.22 Pa. Two additional mixing fans maintained an air speed of 0.3 +/- 0.1 m s-1 at 20 cm above the soil surface. Air was withdrawn continuously from the inlets and outlets of each chamber, and fed sequentially to an infrared CO2 analyzer. With this system, we measured Fc in a 40-year-old temperate Pinus densiflora Sieb. & Zucc. forest from February 8 to May 30, 2001. Mean Fc increased steadily from 0.9 micro mol m-2 s-1 at the beginning of February to 4.6 micro mol m-2 s-1 by the end of May. There was a statistically significant correlation between Fc and surface soil temperature (r = 0.896; P < 0.0001), and the Q10 value was 2.8. Spatial variation of Fc was higher in the non-growing season than in the growing season. Measurements were not interrupted by either rain or snow.

Ketoconazole and the modulation of multidrug resistance-mediated transport in Caco-2 and MDCKII-MDR1 drug transport models.

PubMed

Fan, Y; Rodriguez-Proteau, R

2008-02-01

The hypothesis tested was that ketoconazole can modulate P-glycoprotein, thereby altering cellular uptake and apparent permeability (P(app)) of multidrug-resistant substrates, such as cyclosporin A (CSA) and digoxin, across Caco-2, MDCKII-MDR1, and MDCKII wild-type cell transport models. (3)H-CSA/(3)H-digoxin transport experiments were performed with and without co-exposure to ketoconazole, and (3)H-ketoconzole transport experiments were performed with and without co-exposure to dietary flavonoids, epigallocatechin-3-gallate, and xanthohumol. Ketoconazole (3 microM) reduced the P(app) efflux of CSA and digoxin from 5.07 x 10(-6) to 2.91 x 10(-6) cm s(-1) and from 2.60 x 10(-6) to 1.41 x 10(-6) cm s(-1), respectively, in Caco-2 cells. In the MDCKII-MDR1 cells, ketoconazole reduced the P(app) efflux of CSA and increased the P(app) absorption of digoxin. Cellular uptake of ketoconazole in the Caco-2 cells was significantly inhibited by CSA and digoxin, whereas epigallocatechin-3-gallate and xanthohumol exhibited biphasic responses. In conclusion, ketoconazole modulates the P(app) of P-glycoprotein substrates by interacting with MDR1 protein. Epigallocatechin-3-gallate and xanthohumol modulate the transport and uptake of ketoconazole.

Effects of High Carbon Dioxide Soil-Gas Concentrations and Emission Rates From Mammoth Mountain, California, USA

NASA Astrophysics Data System (ADS)

Farrar, C. D.; Evans, W. C.

2006-12-01

High concentrations (90 vol %) of carbon dioxide (CO2) are present in shallow soils, and CO2 is emitted to the atmosphere at high rates (1,000 g/d/m2), in several locations around Mammoth Mountain. The CO2 emissions have been diffuse and at ambient temperature. CO2 in the soil has killed most of the coniferous forest in five areas totaling 35 ha around the north, west, and south sides of the mountain at altitudes between 2,600 and 3,000 m. Part of the CO2 has dissolved in ground water, causing acidic conditions and severely corroding steel casings in several wells. The high CO2 emission rates are implicated in the deaths of four people in the past eight years. During winter, a large quantity of CO2 is sequestered in the snow pack on parts of the mountain, posing potential dangers for winter recreation. One U.S. Forest Service campground has been closed and safety plans have been implemented by the local ski resort. Mammoth Mountain is a dormant Quaternary volcanic center, but overlies an area that has been affected by periods of magmatic unrest during the past two decades. Hypocenters of long-period earthquakes indicate that basaltic intrusions reach depths as shallow as 20 to 15 km, from which CO2 has exsolved during decompression and (or) crystallization of these intrusions. CO2 moves to the land surface along fracture zones associated with faults and possibly geologic contacts. The magmatic source of CO2 is confirmed by ¦Ä13C = -3 to -5 PDB, a lack of 14C, and 3He/4He = 4 to 5 R/RA. The present-day high CO2 soil-gas concentrations and emission rates were first documented in 1994; however, anecdotal information and low 14C in post-1989 tree rings suggest that an abrupt increase in both concentrations and emission rates probably began in 1990, following a 6-month period of seismic swarm activity beneath the mountain. Emissions in an area on the south flank of the mountain have been the focus of CO2 monitoring and have shown no indications of abatement between 1994 and 2005, during which estimates of the total CO2 efflux ranged from 90 to 150 MT/d. The variations can be partly attributed to the precision of the techniques and to minor differences in measurement protocols between researchers; variations in soil- moisture and atmospheric conditions alone can cause fluctuations in efflux of ± 10% over periods of hours to days.

Modelling CO2 emissions from water surface of a boreal hydroelectric reservoir.

PubMed

Wang, Weifeng; Roulet, Nigel T; Kim, Youngil; Strachan, Ian B; Del Giorgio, Paul; Prairie, Yves T; Tremblay, Alain

2018-01-15

To quantify CO 2 emissions from water surface of a reservoir that was shaped by flooding the boreal landscape, we developed a daily time-step reservoir biogeochemistry model. We calibrated the model using the measured concentrations of dissolved organic and inorganic carbon (C) in a young boreal hydroelectric reservoir, Eastmain-1 (EM-1), in northern Quebec, Canada. We validated the model against observed CO 2 fluxes from an eddy covariance tower in the middle of EM-1. The model predicted the variability of CO 2 emissions reasonably well compared to the observations (root mean square error: 0.4-1.3gCm -2 day -1 , revised Willmott index: 0.16-0.55). In particular, we demonstrated that the annual reservoir surface effluxes were initially high, steeply declined in the first three years, and then steadily decreased to ~115gCm -2 yr -1 with increasing reservoir age over the estimated "engineering" reservoir lifetime (i.e., 100years). Sensitivity analyses revealed that increasing air temperature stimulated CO 2 emissions by enhancing CO 2 production in the water column and sediment, and extending the duration of open water period over which emissions occur. Increasing the amount of terrestrial organic C flooded can enhance benthic CO 2 fluxes and CO 2 emissions from the reservoir water surface, but the effects were not significant over the simulation period. The model is useful for the understanding of the mechanism of C dynamics in reservoirs and could be used to assist the hydro-power industry and others interested in the role of boreal hydroelectric reservoirs as sources of greenhouse gas emissions. Copyright © 2017 Elsevier B.V. All rights reserved.

Uncertainty in the fate of soil organic carbon: A comparison of three conceptually different soil decomposition models

USGS Publications Warehouse

He, Yujie; Yang, Jinyan; Zhuang, Qianlai; McGuire, A. David; Zhu, Qing; Liu, Yaling; Teskey, Robert O.

2014-01-01

Conventional Q10 soil organic matter decomposition models and more complex microbial models are available for making projections of future soil carbon dynamics. However, it is unclear (1) how well the conceptually different approaches can simulate observed decomposition and (2) to what extent the trajectories of long-term simulations differ when using the different approaches. In this study, we compared three structurally different soil carbon (C) decomposition models (one Q10 and two microbial models of different complexity), each with a one- and two-horizon version. The models were calibrated and validated using 4 years of measurements of heterotrophic soil CO2 efflux from trenched plots in a Dahurian larch (Larix gmelinii Rupr.) plantation. All models reproduced the observed heterotrophic component of soil CO2 efflux, but the trajectories of soil carbon dynamics differed substantially in 100 year simulations with and without warming and increased litterfall input, with microbial models that produced better agreement with observed changes in soil organic C in long-term warming experiments. Our results also suggest that both constant and varying carbon use efficiency are plausible when modeling future decomposition dynamics and that the use of a short-term (e.g., a few years) period of measurement is insufficient to adequately constrain model parameters that represent long-term responses of microbial thermal adaption. These results highlight the need to reframe the representation of decomposition models and to constrain parameters with long-term observations and multiple data streams. We urge caution in interpreting future soil carbon responses derived from existing decomposition models because both conceptual and parameter uncertainties are substantial.

Annual cycle of magmatic CO2 in a tree-kill soil at Mammoth Mountain, California: implications for soil acidification

USGS Publications Warehouse

McGee, K.A.; Gerlach, T.M.

1998-01-01

Time-series sensor data reveal significant short-term and seasonal variations of magmatic CO2 in soil over a 12 month period in 1995-1996 at the largest tree-kill site on Mammoth Mountain, central-eastern California. Short-term variations leading to ground-level soil CO2 concentrations hazardous and lethal to humans were triggered by shallow faulting in the absence of increased seismicity or intrusion, consistent with tapping a reservoir of accumulated CO2, rather than direct magma degassing. Hydrologic processes closely modulated seasonal variations in CO2 concentrations, which rose to 65%-100% in soil gas under winter snowpack and plunged more than 25% in just days as the CO2 dissolved in spring snowmelt. The high efflux of CO2 through the tree-kill soils acts as an open-system CO2 buffer causing infiltration of waters with pH values commonly of < 4.2, acid loading of up to 7 keqH+.ha-1.yr-1, mobilization of toxic Al3+, and long-term decline of soil fertility.

The life-extending gene Indy encodes an exchanger for Krebs-cycle intermediates.

PubMed

Knauf, Felix; Mohebbi, Nilufar; Teichert, Carsten; Herold, Diana; Rogina, Blanka; Helfand, Stephen; Gollasch, Maik; Luft, Friedrich C; Aronson, Peter S

2006-07-01

A longevity gene called Indy (for 'I'm not dead yet'), with similarity to mammalian genes encoding sodium-dicarboxylate cotransporters, was identified in Drosophila melanogaster. Functional studies in Xenopus oocytes showed that INDY mediates the flux of dicarboxylates and citrate across the plasma membrane, but the specific transport mechanism mediated by INDY was not identified. To test whether INDY functions as an anion exchanger, we examined whether substrate efflux is stimulated by transportable substrates added to the external medium. Efflux of [14C]citrate from INDY-expressing oocytes was greatly accelerated by the addition of succinate to the external medium, indicating citrate-succinate exchange. The succinate-stimulated [14C]citrate efflux was sensitive to inhibition by DIDS (4,4'-di-isothiocyano-2,2'-disulphonic stilbene), as demonstrated previously for INDY-mediated succinate uptake. INDY-mediated efflux of [14C]citrate was also stimulated by external citrate and oxaloacetate, indicating citrate-citrate and citrate-oxaloacetate exchange. Similarly, efflux of [14C]succinate from INDY-expressing oocytes was stimulated by external citrate, alpha-oxoglutarate and fumarate, indicating succinate-citrate, succinate-alpha-oxoglutarate and succinate-fumarate exchange respectively. Conversely, when INDY-expressing Xenopus oocytes were loaded with succinate and citrate, [14C]succinate uptake was markedly stimulated, confirming succinate-succinate and succinate-citrate exchange. Exchange of internal anion for external citrate was markedly pH(o)-dependent, consistent with the concept that citrate is co-transported with a proton. Anion exchange was sodium-independent. We conclude that INDY functions as an exchanger of dicarboxylate and tricarboxylate Krebs-cycle intermediates. The effect of decreasing INDY activity, as in the long-lived Indy mutants, may be to alter energy metabolism in a manner that favours lifespan extension.

Efflux of creatine kinase from isolated soleus muscle depends on age, sex and type of exercise in mice.

PubMed

Baltusnikas, Juozas; Venckunas, Tomas; Kilikevicius, Audrius; Fokin, Andrej; Ratkevicius, Aivaras

2015-06-01

Elevated plasma creatine kinase (CK) activity is often used as an indicator of exercise-induced muscle damage. Our aim was to study effects of contraction type, sex and age on CK efflux from isolated skeletal muscles of mice. The soleus muscle (SOL) of adult (7.5-month old) female C57BL/6J mice was subjected to either 100 passive stretches, isometric contractions or eccentric contractions, and muscle CK efflux was assessed after two-hour incubation in vitro. SOL of young (3-month old) male and female mice was studied after 100 eccentric contractions. For adult females, muscle CK efflux was larger (p < 0.05) after eccentric contractions than after incubation without exercise (698 ± 344 vs. 268 ± 184 mU·h(-1), respectively), but smaller (p < 0.05) than for young females after the same type of exercise (1069 ± 341 mU·h(-1)). Eccentric exercise-induced CK efflux was larger in muscles of young males compared to young females (2046 ± 317 vs 1069 ± 341 mU · h(-1), respectively, p < 0.001). Our results show that eccentric contractions induce a significant increase in muscle CK efflux immediately after exercise. Isolated muscle resistance to exercise-induced CK efflux depends on age and sex of mice. Key pointsMuscle lengthening contractions induce the highest CK efflux in vitro compared with similar protocol of isometric contractions or passive stretches.Muscle CK efflux in vitro is applicable in studying changes of sarcolemma permeability/integrity, a proxy of muscle damage, in response to muscle contractile activity.Isolated muscle resistance to exercise-induced CK efflux is greater in female compared to male mice of young age and is further increased in adult female mice.

Efflux of Creatine Kinase from Isolated Soleus Muscle Depends on Age, Sex and Type of Exercise in Mice

PubMed Central

Baltusnikas, Juozas; Venckunas, Tomas; Kilikevicius, Audrius; Fokin, Andrej; Ratkevicius, Aivaras

2015-01-01

Elevated plasma creatine kinase (CK) activity is often used as an indicator of exercise-induced muscle damage. Our aim was to study effects of contraction type, sex and age on CK efflux from isolated skeletal muscles of mice. The soleus muscle (SOL) of adult (7.5-month old) female C57BL/6J mice was subjected to either 100 passive stretches, isometric contractions or eccentric contractions, and muscle CK efflux was assessed after two-hour incubation in vitro. SOL of young (3-month old) male and female mice was studied after 100 eccentric contractions. For adult females, muscle CK efflux was larger (p < 0.05) after eccentric contractions than after incubation without exercise (698 ± 344 vs. 268 ± 184 mU·h−1, respectively), but smaller (p < 0.05) than for young females after the same type of exercise (1069 ± 341 mU·h−1). Eccentric exercise-induced CK efflux was larger in muscles of young males compared to young females (2046 ± 317 vs 1069 ± 341 mU · h−1, respectively, p < 0.001). Our results show that eccentric contractions induce a significant increase in muscle CK efflux immediately after exercise. Isolated muscle resistance to exercise-induced CK efflux depends on age and sex of mice. Key points Muscle lengthening contractions induce the highest CK efflux in vitro compared with similar protocol of isometric contractions or passive stretches. Muscle CK efflux in vitro is applicable in studying changes of sarcolemma permeability/integrity, a proxy of muscle damage, in response to muscle contractile activity. Isolated muscle resistance to exercise-induced CK efflux is greater in female compared to male mice of young age and is further increased in adult female mice. PMID:25983588

Possible involvement of cationic-drug sensitive transport systems in the blood-to-brain influx and brain-to-blood efflux of amantadine across the blood-brain barrier.

PubMed

Suzuki, Toyofumi; Fukami, Toshiro; Tomono, Kazuo

2015-03-01

The purpose of this study was to characterize the brain-to-blood efflux transport of amantadine across the blood-brain barrier (BBB). The apparent in vivo efflux rate constant for [(3) H]amantadine from the rat brain (keff ) was found to be 1.53 × 10(-2) min(-1) after intracerebral microinjection using the brain efflux index method. The efflux of [(3) H]amantadine was inhibited by 1-methyl-4-phenylpyridinium (MPP(+) ), a cationic neurotoxin, suggesting that amantadine transport from the brain to the blood across the BBB potentially involves the rat plasma membrane monoamine transporter (rPMAT). On the other hand, other selected substrates for organic cation transporters (OCTs) and organic anion transporters (OATs), as well as inhibitors of P-glycoprotein (P-gp), did not affect the efflux transport of [(3) H]amantadine. In addition, in vitro studies using an immortalized rat brain endothelial cell line (GPNT) showed that the uptake and retention of [(3) H]amantadine by the cells was not changed by the addition of cyclosporin, which is an inhibitor of P-gp. However, cyclosporin affected the uptake and retention of rhodamine123. Finally, the initial brain uptake of [(3) H]amantadine was determined using an in situ mouse brain perfusion technique. Notably, the brain uptake clearance for [(3) H]amantadine was significantly decreased with the co-perfusion of quinidine or verapamil, which are cationic P-gp inhibitors, while MPP(+) did not have a significant effect. It is thus concluded that while P-gp is not involved, it is possible that rPMAT and the cationic drug-sensitive transport system participate in the brain-to-blood efflux and the blood-to-brain influx of amantadine across the BBB, respectively. Copyright © 2014 John Wiley & Sons, Ltd.

Can current moisture responses predict soil CO2 efflux under altered precipitation regimes? A synthesis of manipulation experiments

USDA-ARS?s Scientific Manuscript database

As a key component of the carbon cycle, soil respiration (Rsoil) is being excessively studied with the aim of improving our understanding as well as our ability to predict Rsoil when climate changes. Many manipulation experiments have been performed to test how Rsoil and other carbon fluxes and ecos...

Contrasting fine-root production, survival and soil CO2 efflux in pine and poplar plantation

Treesearch

M. D. Coleman; Richard E. Dickson; J. G. Isebrands

2000-01-01

Tree root activity, including fine-root production, turnover and metabolic activity are significant components of forest productivity and nutrient cycling. Differences in root activity among forest types are not well known. A 3-year study was undertaken in red pine (Pinus resinosa Ait.) and hybrid poplar (Populus tristis X P.

Contrasting fine-root production, survival and soil CO2 efflux in pine and poplar plantations

Treesearch

M.D. Coleman; R.E. Dickson; J.G. Isebrands

2000-01-01

Tree root activity, including fine-root production, turnover and metabolic activity are significant components of forest productivity and nutrient cycling. Differences in root activity among forest types are not well known. A 3-year study was undertaken in red pine (Pinus resinosa Ait.) and hybrid poplar (Populus tristis X P.

Changes in photosynthesis and soil moisture drive the seasonal soil respiration-temperature hysteresis relationship

USDA-ARS?s Scientific Manuscript database

In nearly all large-scale models, CO2 efflux from soil (i.e., soil respiration) is represented as a function of soil temperature. However, the relationship between soil respiration and soil temperature is highly variable at the local scale, and there is often a pronounced hysteresis in the soil resp...

Genome analysis of urease positive Serratia marcescens, co-producing SRT-2 and AAC(6')-Ic with multidrug efflux pumps for antimicrobial resistance.

PubMed

Srinivasan, Vijaya Bharathi; Rajamohan, Govindan

2018-04-05

In this study, we present the genome sequence of Serratia marcescens SM03, recovered from a human gut in India. The final assembly consists of 26 scaffolds (4620 coding DNA sequences, 5.08 Mb, 59.6% G + C ratio) and 79 tRNA genes. Analysis identified novel genes associated with lactose utilization, virulence, P-loop GTPases involved in urease production, CFA/I fimbriae apparatus and Yersinia - type CRISPR proteins. Antibiotic susceptibility testing indicated drug tolerant phenotype and inhibition assays demonstrated involvement of extrusion in resistance. Presence of enzymes SRT-2, AAC(6')-Ic, with additional Ybh transporter and EamA-like efflux pumps signifies the genetic plasticity observed in S. marcescens SM03. Copyright © 2018 Elsevier Inc. All rights reserved.

SLC4A11 is an EIPA-sensitive Na+ permeable pHi regulator

PubMed Central

Ogando, Diego G.; Jalimarada, Supriya S.; Zhang, Wenlin; Vithana, Eranga N.

2013-01-01

Slc4a11, a member of the solute linked cotransporter 4 family that is comprised predominantly of bicarbonate transporters, was described as an electrogenic 2Na+-B(OH)4− (borate) cotransporter and a Na+-2OH− cotransporter. The goal of the current study was to confirm and/or clarify the function of SLC4A11. In HEK293 cells transfected with SLC4A11 we tested if SLC4A11 is a: 1) Na+-HCO3− cotransporter, 2) Na+-OH−(H+) transporter, and/or 3) Na+-B(OH)4− cotransporter. CO2/HCO3− perfusion yielded no significant differences in rate or extent of pHi changes or Na+ flux in SLC4A11-transfected compared with control cells. Similarly, in CO2/HCO3−, acidification on removal of Na+ and alkalinization on Na+ add back were not significantly different between control and transfected indicating that SLC4A11 does not have Na+-HCO3− cotransport activity. In the absence of CO2/HCO3−, SLC4A11-transfected cells showed higher resting intracelllular Na+ concentration ([Na+]i; 25 vs. 17 mM), increased NH4+-induced acidification and increased acid recovery rate (160%) after an NH4 pulse. Na+ efflux and influx were faster (80%) following Na+ removal and add back, respectively, indicative of Na+-OH−(H+) transport by SLC4A11. The increased alkalinization recovery was confirmed in NHE-deficient PS120 cells demonstrating that SLC4A11 is a bonafide Na+-OH−(H+) transporter and not an activator of NHEs. SLC4A11-mediated H+ efflux is inhibited by 5-(N-ethyl-N-isopropyl) amiloride (EIPA; EC50: 0.1 μM). The presence of 10 mM borate did not alter dpHi/dt or ΔpH during a Na+-free pulse in SLC4A11-transfected cells. In summary our results show that SLC4A11 is not a bicarbonate or borate-linked transporter but has significant EIPA-sensitive Na+-OH−(H+) and NH4+ permeability. PMID:23864606

Spatial and temporal variations of diffuse CO_{2} degassing at the N-S volcanic rift-zone of Tenerife (Canary Islands, Spain) during 2002-2015 period

NASA Astrophysics Data System (ADS)

Alonso, Mar; Ingman, Dylan; Alexander, Scott; Barrancos, José; Rodríguez, Fátima; Melián, Gladys; Pérez, Nemesio M.

2016-04-01

Tenerife is the largest of the Canary Islands and, together with Gran Canaria Island, is the only one with a central volcanic complex that started to grow at about 3.5 Ma. Nowadays the central complex is formed by Las Cañadas caldera, a volcanic depression measuring 16×9 km that resulted from multiple vertical collapses and was partially filled by post-caldera volcanic products. Up to 297 mafic monogenetic cones have been recognized on Tenerife, and they represent the most common eruptive activity occurring on the island during the last 1 Ma (Dóniz et al., 2008). Most of the monogenetic cones are aligned following a triple junction-shaped rift system, as result of inflation produced by the concentration of emission vents and dykes in bands at 120o to one another as a result of minimum stress fracturing of the crust by a mantle upwelling. The main structural characteristic of the southern volcanic rift (N-S) of the island is an apparent absence of a distinct ridge, and a fan shaped distribution of monogenetic cones. Four main volcanic successions in the southern volcanic rift zone of Tenerife, temporally separated by longer periods (˜70 - 250 ka) without volcanic activity, have been identified (Kröchert and Buchner, 2008). Since there are currently no visible gas emissions at the N-S rift, diffuse degassing surveys have become an important geochemical tool for the surveillance of this volcanic system. We report here the last results of diffuse CO2 efflux survey at the N-S rift of Tenerife, performed using the accumulation chamber method in the summer period of 2015. The objectives of the surveys were: (i) to constrain the total CO2 output from the studied area and (ii) to evaluate occasional CO2 efflux surveys as a volcanic surveillance tool for the N-S rift of Tenerife. Soil CO2 efflux values ranged from non-detectable up to 31.7 g m-2 d-1. A spatial distribution map, constructed following the sequential Gaussian simulation (sGs) procedure, did not show an apparent relation between higher diffuse CO2 emission values and the main N-S axis of the rift. The total CO2 output released to the atmosphere in a diffuse way has been estimated at 707 t d-1, which represents a value three times higher than the average of the three studies conducted previously. This observed increase suggests the occurrence of an episodic enhanced magmatic (endogenous) contribution. This also confirms the need of periodic diffuse emission surveys in the area as a powerful volcanic surveillance tool, mainly in volcanic systems where visible gas emanations are absent. References: Dóniz et al., 2008. J. Volcanol. Geotherm. Res. 173, 185. Kröchert and Buchner, 2008. Geol. Mag. 146, 161.

Continuous monitoring of diffuse CO2 degassing at Taal volcano, Philippines

NASA Astrophysics Data System (ADS)

Padron, E.; Hernandez Perez, P. A.; Arcilla, C. A.; Lagmay, A. M. A.; Perez, N. M.; Quina, G.; Padilla, G.; Barrancos, J.; Cótchico, M. A.; Melián, G.

2016-12-01

Observing changes in the composition and discharge rates of volcanic gases is an important part of volcanic monitoring programs, because some gases released by progressive depressurization of magma during ascent are highly mobile and reach the surface well before their parental magma. Among volcanic gases, CO2 is widely used in volcano studies and monitoring because it is one of the earliest released gas species from ascending magma, and it is considered conservative. Taal Volcano in Southwest Luzon, Philippines, lies between a volcanic arc front (facing the subduction zone along the Manila Trench) and a volcanic field formed from extension beyond the arc front. Taal Volcano Island is formed by a main tuff cone surrounded by several smaller tuff cones, tuff rings and scoria cones. This island is located in the center of the 30 km wide Taal Caldera, now filled by Taal Lake. To monitor the volcanic activity of Taal volcano is a priority task in the Philippines, because several million people live within a 20-km radius of Taal's caldera rim. In the period from 2010-2011, during a period of volcanic unrest, the main crater lake of Taal volcano released the highest diffuse CO2 emission rates reported to date by volcanic lakes worldwide. The maximum CO2 emission rate measured in the study period occurred two months before the strongest seismic activity recorded during the unrest period (Arpa et al., 2013, Bull Volcanol 75:747). In the light of the excellent results obtained through diffuse degassing studies, an automatic geochemical station to monitor in a continuous mode the diffuse CO2 degassing in a selected location of Taal, was installed in January 2016 to improve the early warning system at the volcano. The station is located at Daang Kastila, at the northern portion of the main crater rim. It measures hourly the diffuse CO2 efflux, atmospheric CO2 concentration, soil water content and temperature, wind speed and direction, air temperature and humidity, rainfall, and barometric pressure. The first results show a time series of CO2 efflux with values in the range 20-690 gm-2d-1.Soil temperature, heavily influenced by rainfall, ranged between 74 and 96ºC. The detailed analysis of diffuse CO2 degassing measured by this automatic station might be a useful geochemical tool for the seismo-volcanic surveillance of Taal.

Seasonal dynamics of CO2 efflux in soils amended with composted and thermally-dried sludge as affected by soil tillage systems in a semi-arid agroecosystem

NASA Astrophysics Data System (ADS)

García-Gil, Juan Carlos; Soler-Rovira, Pedro; López-de-Sa, Esther G.; Polo, Alfredo

2014-05-01

In semi-arid agricultural soils, seasonal dynamic of soil CO2 efflux (SCE) is highly variable. Based on soil respiration measurements the effects of different management systems (moldboard plowing, chisel and no-tillage) and the application of composted sludge (CS) and thermally-dried sewage sludge (TSS) was investigated in a long-term field experiment (28 years) conducted on a sandy-loam soil at the experimental station 'La Higueruela' (40o 03'N, 4o 24'W). Both organic amendments were applied at a rate of 30 Mg ha-1 prior to tillage practices. Unamended soils were used as control for each tillage system. SCE was moderate in late spring (2.2-11.8 μmol CO2 m-2 s-1) when amendments were applied and tillage was performed, markedly decreased in summer (0.4-3.2 μmol CO2 m-2 s-1), following a moderate increase in autumn (3.4-14.1 μmol CO2 m-2 s-1), rising sharply in October (5.6-39.8 μmol CO2 m-2 s-1 ). In winter, SCE was low (0.6-6.5 μmol CO2 m-2 s-1). In general, SCE was greater in chisel and moldboard tilled soils, and in CS and particularly TSS-amended soils, due to the addition of labile C with these amendments, meanwhile no-tillage soils exhibited smaller increases in C efflux throughout the seasons. Soil temperature controlled the seasonal variations of SCE. In summer, when drought occurs, a general decrease of SCE was observed due to a deficit in soil water content. After drought period SCE jumped to high values in response to rain events ('Birch effect') that changed soil moisture conditions. Soil drying in summer and rewetting in autumn may promotes some changes on the structure of soil microbial community, affecting associated metabolic processes, and enhancing a rapid mineralization of water-soluble organic C compounds and/or dead microbial biomass that acts as an energy source for soil microorganisms. To assess the effects of tillage and amendments on SCE, Q10 values were calculated. Data were grouped into three groups according to soil moisture (0.03-0.10 m3m-3, 0-11-0.21 m3m-3, 0.22-0.30 m3m-3). In general, Q10 values were lower at elevated temperatures when soil moisture contents decreased, confirming that SCE is less sensitive to soil temperature during drought periods. Q10 values were higher in moldboard and chisel tilled soils, possibly due to the incorporation of residues into soil and the increase of soil C substrate, meanwhile in no-tillage part of the organic C pools are likely protected from microorganisms by physico-chemical mechanisms. TSS-amended soils exhibited higher Q10 values than CS, pointing that the biochemical lability of the organic C added with amendments exerts an influence on SCE. Acknowledgements: this research was supported by the Spanish CICYT, Project no. CTM2011-25557.

Chrysin enhances doxorubicin-induced cytotoxicity in human lung epithelial cancer cell lines: The role of glutathione

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brechbuhl, Heather M.; Kachadourian, Remy; Min, Elysia

We hypothesized that flavonoid-induced glutathione (GSH) efflux through multi-drug resistance proteins (MRPs) and subsequent intracellular GSH depletion is a viable mechanism to sensitize cancer cells to chemotherapies. This concept was demonstrated using chrysin (5–25 μM) induced GSH efflux in human non-small cell lung cancer lines exposed to the chemotherapeutic agent, doxorubicin (DOX). Treatment with chrysin resulted in significant and sustained intracellular GSH depletion and the GSH enzyme network in the four cancer cell types was predictive of the severity of chrysin induced intracellular GSH depletion. Gene expression data indicated a positive correlation between basal MRP1, MRP3 and MRP5 expression andmore » total GSH efflux before and after chrysin exposure. Co-treating the cells for 72 h with chrysin (5–30 μM) and DOX (0.025–3.0 μM) significantly enhanced the sensitivity of the cells to DOX as compared to 72-hour DOX alone treatment in all four cell lines. The maximum decrease in the IC{sub 50} values of cells treated with DOX alone compared to co-treatment with chrysin and DOX was 43% in A549 cells, 47% in H157 and H1975 cells and 78% in H460 cells. Chrysin worked synergistically with DOX to induce cancer cell death. This approach could allow for use of lower concentrations and/or sensitize cancer cells to drugs that are typically resistant to therapy. -- Graphical abstract: Possible mechanisms by which chrysin enhances doxorubicin-induced toxicity in cancer cells. Highlights: ► Chyrsin sustains a significant depletion of GSH levels in lung cancer cells. ► Chyrsin synergistically potentiates doxorubicin-induced cancer cell cytotoxicity. ► Cancer cell sensitivity correlated with GSH and MRP gene network expression. ► This approach could allow for lower side effects and targeting resistant tumors.« less

Biogeochemical cycling of carbon, nitrogen, and sulfur at the Howland Integrated Forest Study site, Howland, Maine

Treesearch

James W. McLaughlin; Ivan J. Fernandez; Stewart M. Goltz; Lindsey E. Rustad; Larry Zibilske

1996-01-01

The biogeochemistry of C, N, and S was studied for six years at the Howland Integrated Forest Study (HIFS) site by measuring those constituents in major above- and below-ground pools and fluxes. Leaching losses of C from the solum were much less than CO2 efflux, with a mean annual leaching rate of 31.2 kg ha-1 yr

1-(1H-indol-3-yl)ethanamine derivatives as potent Staphylococcus aureus NorA efflux pump inhibitors.

PubMed

Hequet, Arnaud; Burchak, Olga N; Jeanty, Matthieu; Guinchard, Xavier; Le Pihive, Emmanuelle; Maigre, Laure; Bouhours, Pascale; Schneider, Dominique; Maurin, Max; Paris, Jean-Marc; Denis, Jean-Noël; Jolivalt, Claude

2014-07-01

The synthesis of 37 1-(1H-indol-3-yl)ethanamine derivatives, including 12 new compounds, was achieved through a series of simple and efficient chemical modifications. These indole derivatives displayed modest or no intrinsic anti-staphylococcal activity. By contrast, several of the compounds restored, in a concentration-dependent manner, the antibacterial activity of ciprofloxacin against Staphylococcus aureus strains that were resistant to fluoroquinolones due to overexpression of the NorA efflux pump. Structure-activity relationships studies revealed that the indolic aldonitrones halogenated at position 5 of the indole core were the most efficient inhibitors of the S. aureus NorA efflux pump. Among the compounds, (Z)-N-benzylidene-2-(tert-butoxycarbonylamino)-1-(5-iodo-1H-indol-3-yl)ethanamine oxide led to a fourfold decrease of the ciprofloxacin minimum inhibitory concentration against the SA-1199B strain when used at a concentration of 0.5 mg L(-1) . To the best of our knowledge, this activity is the highest reported to date for an indolic NorA inhibitor. In addition, a new antibacterial compound, tert-butyl (2-(3-hydroxyureido)-2-(1H-indol-3-yl)ethyl)carbamate, which is not toxic for human cells, was also found. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Evidence from simultaneous intracellular- and surface-pH transients that carbonic anhydrase II enhances CO2 fluxes across Xenopus oocyte plasma membranes

PubMed Central

Occhipinti, Rossana; Boron, Walter F.

2014-01-01

The α-carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the interconversion of CO2 and HCO3−. Here, we focus on human CA II (CA II), a ubiquitous cytoplasmic enzyme. In the second paper in this series, we examine CA IV at the extracellular surface. After microinjecting recombinant CA II in a Tris solution (or just Tris) into oocytes, we expose oocytes to 1.5% CO2/10 mM HCO3−/pH 7.50 while using microelectrodes to monitor intracellular pH (pHi) and surface pH (pHS). CO2 influx causes the familiar sustained pHi fall as well as a transient pHS rise; CO2 efflux does the opposite. Both during CO2 addition and removal, CA II increases the magnitudes of the maximal rate of pHi change, (dpHi/dt)max, and the maximal change in pHS, ΔpHS. Preincubating oocytes with the inhibitor ethoxzolamide eliminates the effects of CA II. Compared with pHS, pHi begins to change only after a delay of ∼9 s and its relaxation has a larger (i.e., slower) time constant (τpHi > τpHS). Simultaneous measurements with two pHi electrodes, one superficial and one deep, suggest that impalement depth contributes to pHi delay and higher τpHi. Using higher CO2/HCO3− levels, i.e., 5%/33 mM HCO3− or 10%/66 mM HCO3−, increases (dpHi/dt)max and ΔpHS, though not in proportion to the increase in [CO2]. A reaction-diffusion mathematical model (described in the third paper in this series) accounts for the above general features and supports the conclusion that cytosolic CA—consuming entering CO2 or replenishing exiting CO2—increases CO2 fluxes across the cell membrane. PMID:24965587

Management Impacts on Carbon Dynamics in a Sierra Nevada Mixed Conifer Forest

PubMed Central

Dore, Sabina; Fry, Danny L.; Collins, Brandon M.; Vargas, Rodrigo; York, Robert A.; Stephens, Scott L.

2016-01-01

Forest ecosystems can act as sinks of carbon and thus mitigate anthropogenic carbon emissions. When forests are actively managed, treatments can alter forests carbon dynamics, reducing their sink strength and switching them from sinks to sources of carbon. These effects are generally characterized by fast temporal dynamics. Hence this study monitored for over a decade the impacts of management practices commonly used to reduce fire hazards on the carbon dynamics of mixed-conifer forests in the Sierra Nevada, California, USA. Soil CO2 efflux, carbon pools (i.e. soil carbon, litter, fine roots, tree biomass), and radial tree growth were compared among un-manipulated controls, prescribed fire, thinning, thinning followed by fire, and two clear-cut harvested sites. Soil CO2 efflux was reduced by both fire and harvesting (ca. 15%). Soil carbon content (upper 15 cm) was not significantly changed by harvest or fire treatments. Fine root biomass was reduced by clear-cut harvest (60–70%) but not by fire, and the litter layer was reduced 80% by clear-cut harvest and 40% by fire. Thinning effects on tree growth and biomass were concentrated in the first year after treatments, whereas fire effects persisted over the seven-year post-treatment period. Over this period, tree radial growth was increased (25%) by thinning and reduced (12%) by fire. After seven years, tree biomass returned to pre-treatment levels in both fire and thinning treatments; however, biomass and productivity decreased 30%-40% compared to controls when thinning was combined with fire. The clear-cut treatment had the strongest impact, reducing ecosystem carbon stocks and delaying the capacity for carbon uptake. We conclude that post-treatment carbon dynamics and ecosystem recovery time varied with intensity and type of treatments. Consequently, management practices can be selected to minimize ecosystem carbon losses while increasing future carbon uptake, resilience to high severity fire, and climate related stresses. PMID:26918460

AUX1 regulates root gravitropism in Arabidopsis by facilitating auxin uptake within root apical tissues.

PubMed Central

Marchant, A; Kargul, J; May, S T; Muller, P; Delbarre, A; Perrot-Rechenmann, C; Bennett, M J

1999-01-01

Plants employ a specialized transport system composed of separate influx and efflux carriers to mobilize the plant hormone auxin between its site(s) of synthesis and action. Mutations within the permease-like AUX1 protein significantly reduce the rate of carrier-mediated auxin uptake within Arabidopsis roots, conferring an agravitropic phenotype. We are able to bypass the defect within auxin uptake and restore the gravitropic root phenotype of aux1 by growing mutant seedlings in the presence of the membrane-permeable synthetic auxin, 1-naphthaleneacetic acid. We illustrate that AUX1 expression overlaps that previously described for the auxin efflux carrier, AtPIN2, using transgenic lines expressing an AUX1 promoter::uidA (GUS) gene. Finally, we demonstrate that AUX1 regulates gravitropic curvature by acting in unison with the auxin efflux carrier to co-ordinate the localized redistribution of auxin within the Arabidopsis root apex. Our results provide the first example of a developmental role for the auxin influx carrier within higher plants and supply new insight into the molecular basis of gravitropic signalling. PMID:10205161

Soil respiration patterns for four major land-use types of the agro-pastoral region of northern China

USDA-ARS?s Scientific Manuscript database

Land-use types and management practices are critical factors that affect soil CO2 efflux (Rs). In the agro-pastoral area of northern China, land-use types have changed considerably during the last 60 years due to changes in the social-economic status of the human population and associated changes i...

Leaf litter is an important mediator of soil respiration in an oak-dominated forest

Treesearch

Jared L. DeForest; Jiquan Chen; Steve G. McNulty

2009-01-01

The contribution of the organic (O) horizon to total soil respiration is poorly understood even though it can represent a large source of uncertainty due to seasonal changes in microclimate and O horizon properties due to plant phenology. Our objectives were to partition the CO2 effluxes of litter layer and mineral soil from total soil...

Oxaloacetate- and acetoacetate-induced calcium efflux from mitochondria occurs by reversal of the uptake pathway.

PubMed Central

Bardsley, M E; Brand, M D

1982-01-01

1. Addition of oxaloacetate or acetoacetate to isolated rat liver mitochondria results in an efflux of Ca2+. Concomitant with this efflux is an immediate oxidation of endogenous nicotinamide nucleotides, a fall in the mitochondrial membrane potential and an increase in the rate of respiration. The primary effect in this sequence may be either (a) physiologically important stimulation of a Ca2+-efflux carrier, followed by Ca2+ re-uptake, a fall in membrane potential and increased respiration, or (b) physiologically unimportant damage to mitochondrial integrity, followed by a fall in membrane potential, increased respiration and Ca2+ efflux. 2. Ruthenium Red and EGTA will restore the increased respiratory rate to one approximating to the control rate of respiration. However, addition of lanthanide, at a concentration which inhibits the uptake but not the normal efflux of Ca2+, inhibits the rate of Ca2+ efflux induced by oxaloacetate or acetoacetate. Therefore the observed efflux is occurring by a reversal of the uptake pathway (uniporter) and thus follows the fall in membrane potential. 3. From these results we conclude that the decrease in membrane potential and increase in the rate of respiration seen during oxaloacetate- or acetoacetate-induced Ca2+ efflux cannot be accounted for by rapid Ca2+ cycling, but are due to damage to mitochondrial integrity. PMID:7082307

Timescale dependence of environmental controls on methane efflux from Poyang Hu, China

NASA Astrophysics Data System (ADS)

Liu, Lixiang; Xu, Ming; Li, Renqiang; Shao, Rui

2017-04-01

Lakes are an important natural source of CH4 to the atmosphere. However, the multi-seasonal CH4 efflux from lakes has been rarely studied. In this study, the CH4 efflux from Poyang Hu, the largest freshwater lake in China, was measured monthly over a 4-year period by using the floating-chamber technique. The mean annual CH4 efflux throughout the 4 years was 0.54 mmol m-2 day-1, ranging from 0.47 to 0.60 mmol m-2 day-1. The CH4 efflux had a high seasonal variation with an average summer (June to August) efflux of 1.34 mmol m-2 day-1 and winter (December to February) efflux of merely 0.18 mmol m-2 day-1. The efflux showed no apparent diel pattern, although most of the peak effluxes appeared in the late morning, from 10:00 to 12:00 CST (GMT + 8). Multivariate stepwise regression on a seasonal scale showed that environmental factors, such as sediment temperature, sediment total nitrogen content, dissolved oxygen, and total phosphorus content in the water, mainly regulated the CH4 efflux. However, the CH4 efflux only showed a strong positive linear correlation with wind speed within 1 day on a bihourly scale in the multivariate regression analyses but almost no correlation with wind speed on diurnal and seasonal scales.

Tree-ring 14C links seismic swarm to CO2 spike at Yellowstone, USA

USGS Publications Warehouse

Evans, William C.; Bergfeld, D.; McGeehin, J.P.; King, J.C.; Heasler, H.

2010-01-01

Mechanisms to explain swarms of shallow seismicity and inflation-deflation cycles at Yellowstone caldera (western United States) commonly invoke episodic escape of magma-derived brines or gases from the ductile zone, but no correlative changes in the surface efflux of magmatic constituents have ever been documented. Our analysis of individual growth rings in a tree core from the Mud Volcano thermal area within the caldera links a sharp ~25% drop in 14C to a local seismic swarm in 1978. The implied fivefold increase in CO2 emissions clearly associates swarm seismicity with upflow of magma-derived fluid and shows that pulses of magmatic CO2 can rapidly traverse the 5-kmthick brittle zone, even through Yellowstone's enormous hydrothermal reservoir. The 1978 event predates annual deformation surveys, but recognized connections between subsequent seismic swarms and changes in deformation suggest that CO2 might drive both processes. ?? 2010 Geological Society of America.

CO2 Fluxes and Concentrations in a Residential Area in the Southern Hemisphere

NASA Astrophysics Data System (ADS)

Weissert, L. F.; Salmond, J. A.; Turnbull, J. C.; Schwendenmann, L.

2014-12-01

While cities are generally major sources of anthropogenic carbon dioxide (CO2) emissions, recent research has shown that parts of urban areas may also act as CO2 sinks due to CO2 uptake by vegetation. However, currently available results are related to a large degree of uncertainty due to the limitations of the applied methods and the limited number of studies available from urban areas, particularly from the southern hemisphere. In this study, we explore the potential of eddy covariance and tracer measurements (13C and 14C isotopes of CO2) to quantify and partition CO2 fluxes and concentrations in a residential urban area in Auckland, New Zealand. Based on preliminary results from autumn and winter (March to July 2014) the residential area is a small source of CO2 (0.11 mol CO2 m-2 day-1). CO2 fluxes and concentrations follow a distinct diurnal cycle with a morning peak between 7:00 and 9:00 (max: 0.25 mol CO2 m-2 day-1/412 ppm) and midday low with negative CO2 fluxes (min: -0.17 mol CO2 m-2 day-1/392 ppm) between 10:00 and 15:00 local time, likely due to photosynthetic CO2 uptake by local vegetation. Soil CO2 efflux may explain that CO2 concentrations increase and remain high (401 ppm) throughout the night. Mean diurnal winter δ13C values are in anti-phase with CO2 concentrations and vary between -9.0 - -9.7‰. The depletion of δ13C compared to clean atmospheric air (-8.2‰) is likely a result of local CO2 sources dominated by gasoline combustion (appr. 60%) during daytime. A sector analysis (based on prevailing wind) of CO2 fluxes and concentrations indicates lower CO2 fluxes and concentrations from the vegetation-dominated sector, further demonstrating the influence of vegetation on local CO2 concentrations. These results provide an insight into the temporal and spatial variability CO2 fluxes/concentrations and potential CO2 sinks and sources from a city in the southern hemisphere and add valuable information to the global database of urban CO2 fluxes.

In situ assessment of the velocity of carbon transfer by tracing 13 C in trunk CO2 efflux after pulse labelling: variations among tree species and seasons.

PubMed

Dannoura, Masako; Maillard, Pascale; Fresneau, Chantal; Plain, Caroline; Berveiller, Daniel; Gerant, Dominique; Chipeaux, Christophe; Bosc, Alexandre; Ngao, Jérôme; Damesin, Claire; Loustau, Denis; Epron, Daniel

2011-04-01

Phloem is the main pathway for transferring photosynthates belowground. In situ(13) C pulse labelling of trees 8-10 m tall was conducted in the field on 10 beech (Fagus sylvatica) trees, six sessile oak (Quercus petraea) trees and 10 maritime pine (Pinus pinaster) trees throughout the growing season. Respired (13) CO2 from trunks was tracked at different heights using tunable diode laser absorption spectrometry to determine time lags and the velocity of carbon transfer (V). The isotope composition of phloem extracts was measured on several occasions after labelling and used to estimate the rate constant of phloem sap outflux (kP ). Pulse labelling together with high-frequency measurement of the isotope composition of trunk CO2 efflux is a promising tool for studying phloem transport in the field. Seasonal variability in V was predicted in pine and oak by bivariate linear regressions with air temperature and soil water content. V differed among the three species consistently with known differences in phloem anatomy between broadleaf and coniferous trees. V increased with tree diameter in oak and beech, reflecting a nonlinear increase in volumetric flow with increasing bark cross-sectional area, which suggests changes in allocation pattern with tree diameter in broadleaf species. Discrepancies between V and kP indicate vertical changes in functional phloem properties. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

Tree species influence soil-atmosphere fluxes of the greenhouse gases CO2, CH4 and N2O

NASA Astrophysics Data System (ADS)

Steffens, Christina; Vesterdal, Lars; Pfeiffer, Eva-Maria

2016-04-01

In the temperate zone, forests are the greatest terrestrial sink for atmospheric CO2, and tree species affect soil C stocks and soil CO2 emissions. When considering the total greenhouse gas (GHG) balance of the forest soil, the relevant GHGs CH4 and N2O should also be considered as they have a higher global warming potential than CO2. The presented data are first results from a field study in a common garden site in Denmark where tree species with ectomycorrhizal colonization (beech - Fagus sylvatica, oak - Quercus robur) and with arbuscular mycorrhizal colonization (maple - Acer pseudoplatanus, ash - Fraxinus excelsior) have been planted in monocultures in adjacent blocks of about 0.25 ha in the year 1973 on former arable land. The soil-atmosphere fluxes of all three gases were measured every second week since August 2015. The hypothesis is that the total GHG efflux from forest soil would differ between species, and that these differences could be related to the type of mycorrhizal association and leaf litter quality. Preliminary results (August to December 2015) indicate that tree species influence the fluxes (converted to CO2-eq) of the three GHGs. Total soil CO2 efflux was in the low end of the range reported for temperate broadleaved forests but similar to the measurements at the same site approximately ten years ago. It was highest under oak (9.6±2.4 g CO2 m-2 d-1) and lowest under maple (5.2±1.6 g CO2 m-2 d-1). In contrast, soil under oak was a small but significant sink for CH4(-0.005±0.003 g CO2-eq m-2 d-1), while there were almost no detectable CH4 fluxes in maple. Emissions of N2O were highest under beech (0.6±0.6 g CO2-eq m-2 d-1) and oak (0.2±0.09 g CO2-eq m-2 d-1) and lowest under ash (0.03±0.04 g CO2-eq m-2 d-1). In the total GHG balance, soil CH4 uptake was negligible (≤0.1% of total emissions). Emissions of N2O (converted to CO2-eq) contributed <1% (ash) to 8% (beech) to total GHG emissions. Summing up all GHG emissions, the tree species were divided in two groups as hypothesized: Beech and oak, both colonized by ectomycorrhiza and producing leaf litter with a high lignin:N ratio, had higher total GHG emissions (8.9±3.5 and 10.3±2.9 g CO2-eq m-2 d-1) than maple and ash (6.2±1.4 and 6.2±0.9 g CO2-eq m-2 d-1) that are colonized by arbuscular mycorrhiza and produce leaf litter with a lower lignin:N ratio.

Ascorbic Acid Efflux from Human Brain Microvascular Pericytes: Role of Re-uptake

PubMed Central

May, James M.; Qu, Zhi-chao

2015-01-01

Microvascular pericytes take up ascorbic acid on the ascorbate transporter SVCT2. Intracellular ascorbate then protects the cells against apoptosis induced by culture at diabetic glucose concentrations. To investigate whether pericytes might also provide ascorbate to the underlying endothelial cells, we studied ascorbate efflux from human pericytes. When loaded with ascorbate to intracellular concentrations of 0.8–1.0 mM, almost two-thirds of intracellular ascorbate effluxed from the cells over 2 h. This efflux was opposed by ascorbate re-uptake from the medium, since preventing re-uptake by destroying extracellular ascorbate with ascorbate oxidase increased ascorbate loss even further. Ascorbate re-uptake occurred on the SVCT2, since its blockade by replacing medium sodium with choline, by the SVCT2 inhibitor sulfinpyrazone, or by extracellular ascorbate accelerated ascorbate loss from the cells. This was supported by finding that net efflux of radiolabeled ascorbate was increased by unlabeled extracellular ascorbate with a half-maximal effect in the range of the high affinity Km of the SVCT2. Intracellular ascorbate did not inhibit its efflux. To assess the mechanism of ascorbate efflux, known inhibitors of volume-regulated anion channels (VRACs) were tested. These potently inhibited ascorbate transport into cells on the SVCT2, but not its efflux. An exception was the anion transport inhibitor DIDS, which, despite inhibition of ascorbate uptake, also inhibited net efflux at 25–50 µM. These results suggest that ascorbate efflux from vascular pericytes occurs on a DIDS-inhibitable transporter or channel different from VRACs. Further, ascorbate efflux is opposed by re-uptake of ascorbate on the SVCT2, providing a potential regulatory mechanism. PMID:26340060

microRNA-212 promotes lipid accumulation and attenuates cholesterol efflux in THP-1 human macrophages by targeting SIRT1.

PubMed

Miao, Haiwei; Zeng, Honghui; Gong, Hui

2018-02-15

Macrophage foam cell formation is a key initiating event in the pathogenesis of atherosclerosis. This work was conducted to determine the role of microRNA (miR)-212 in the transformation of foam cells from macrophages. We examined the expression of miR-212 in atherosclerotic lesions in an apoE-deficient (apoE -/- ) mouse model. The effects of miR-212 overexpression and knockdown on lipid accumulation and cholesterol homeostasis in THP-1 macrophages after exposure to oxidized low-density lipoprotein (oxLDL). The mechanism underlying the activity of miR-212 was explored. It was found that miR-212 was downregulated in atherosclerotic lesions and macrophages from apoE -/- mice fed high-fat diet, compared to the equivalents from apoE -/- mice fed standard diet. Overexpression of miR-212 promoted lipid accumulation in oxLDL-treated THP-1 macrophages, whereas miR-212 depletion exerted an opposite effect. Macrophage cholesterol efflux to apolipoprotein A-I was significantly reduced by miR-212, which was accompanied by reduced ABCA1 expression. Mechanistically, miR-212 targeted sirtuin 1 (SIRT1) to repress the expression of ABCA1 in THP-1 macrophages. Rescue experiments confirmed that co-expression of SIRT1 attenuated lipid accumulation and restored cholesterol efflux in miR-212-overexpressing THP-1 macrophages. Collectively, miR-212 facilitates macrophage foam cell formation and suppresses ABCA1-dependent cholesterol efflux through downregulation of SIRT1. Targeting miR-212 may provide a potential therapeutic strategy for atherosclerosis. Copyright © 2017 Elsevier B.V. All rights reserved.

The 'overflow tap' theory: linking GPP to forest soil carbon dynamics and the mycorrhizal component

NASA Astrophysics Data System (ADS)

Heinemeyer, Andreas; Willkinson, Matthew; Subke, Jens-Arne; Casella, Eric; Vargas, Rodrigo; Morison, James; Ineson, Phil

2010-05-01

Quantifying soil organic carbon (SOC) dynamics accurately is crucial to underpin better predictions of future climate change feedbacks within the atmosphere-vegetation-soil system. Measuring the components of ecosystem carbon fluxes has become a central point of the research focus during the last decade, not least because of the large SOC stocks, potentially vulnerable to climate change. However, our basic understanding of the composition and environmental responses of the soil CO2 efflux is still under debate and limited by the available field methodologies. For example, only recently did we separate successfully root (R), mycorrhizal fungal (F) and soil animal/microbial (H) respiration based on a mesh-bag/collar methodology and described their unique environmental responses. Yet it might be these differences which are crucial for understanding C-cycle feedbacks and observed limitations in plant biomass increase under elevated carbon dioxide (e.g. FACE) studies. It is becoming clear that these flux components and their environmental responses must be incorporated in models that link but also treat the heterotrophic and autotrophic fluxes separately. However, owing to a scarcity of experimental data, separation of fluxes and environmental drivers has been ignored in current models. We are now in a position to parameterize realistic soil C turnover models that include both, decomposition and plant-derived fluxes. Such models will allow (1) a direct comparison of model output to field data for all flux components, (2) include the potential to link plant C allocation to the rhizosphere with increased decomposition activity through soil C priming, and (3) to explore the potential of plant biomass C sequestration limitations under increased C assimilation. These mechanisms are fundamental in describing the stability of future SOC stocks due to elevated temperatures and carbon dioxide, altering SOC decomposition directly and indirectly through changes in plant productivity. The work presented here focuses on three critical areas: (1) We present annual fluxes at hourly intervals for the three soil CO2 efflux components (R, F and H) from a 75 year-old deciduous oak forest in SE England. We investigate the individual environmental responses of the three flux components, and compare them to soil decomposition modelled by CENTURY and its latest version (i.e. DAYCENT), which separately models root-derived respiration in addition to the soil decomposition output. (2) Using estimates of gross primary productivity (GPP) based on eddy covariance measurements from the same site, we explore linkages between GPP and soil respiration component fluxes using basic regression and wavelet analyses. We show a distinctly different time lag signal between GPP and root vs. mycorrhizal fungal respiration. We then discuss how models might need to be improved to accurately predict total soil CO2 efflux, including root-derived respiration. (3) We finally discuss the ‘overflow tap' theory, that during periods of high assimilation (e.g. optimum environmental conditions or elevated CO2) surplus non-structural C is allocated belowground to the mycorrhizal network; this additional C could then be used and released by the associated fungal partners, causing soil priming through stimulating decomposition.

Leaf Cutter Ant (Atta cephalotes) Soil Modification and In Situ CO2 Gas Dynamics in a Neotropical Wet Forest

NASA Astrophysics Data System (ADS)

Fernandez Bou, A. S.; Carrasquillo Quintana, O.; Dierick, D.; Harmon, T. C.; Johnson, S.; Schwendenmann, L.; Zelikova, T. J.

2016-12-01

The goal of this work is to advance our understanding of soil carbon cycling in highly productive neotropical wet forests. More specifically, we are investigating the influence of leaf cutter ants (LCA) on soil CO2 gas dynamics in primary and secondary forest soils at La Selva Biological Station, Costa Rica. LCA are the dominant herbivore in tropical Americas, responsible for as much as 50% of the total herbivory. Their presence is increasing and their range is expanding because of forest fragmentation and other human impacts. We installed gas sampling wells in LCA (Atta cephalotes) nest and control sites (non-nests in the same soil and forest settings). The experimental design encompassed land cover (primary and secondary forest) and soil type (residual and alluvial). We collected gas samples monthly over an 18-month period. Several of the LCA nests were abandoned during this period. Nevertheless, we continued to sample these sites for LCA legacy effects. In several of the sites, we also installed sensors to continuously monitor soil moisture content, temperature, and CO2 levels. Within the 18-month period we conducted a 2-month field campaign to collect soil and nest vent CO2 efflux data from 3 of the nest-control pairs. Integrating the various data sets, we observed that for most of the sites nest and control soils behaved similarly during the tropical dry season. However, during the wet season gas well CO2 concentrations increased in the control sites while levels in the nests remained at dry season levels. This outcome suggests that ants modify soil gas transport properties (e.g., tortuosity). In situ time series and efflux sampling campaign data corroborated these findings. Abandoned nest CO2 levels were similar to those of the active nests, supporting the notion of a legacy effect from LCA manipulations. For this work, the period of abandonment was relatively short (several months to 1 year maximum), which appears to be insufficient for estimating the duration effect. Overall, these results demonstrate that LCA exert a significant effect on carbon cycling in rain forest soils.

Mechanisms of chitosan-coated poly(lactic-co-glycolic acid) nanoparticles for improving oral absorption of 7-ethyl-10-hydroxycamptothecin

NASA Astrophysics Data System (ADS)

Guo, Miao; Rong, Wen-Ting; Hou, Jie; Wang, Dong-Fang; Lu, Yu; Wang, Ying; Yu, Shu-Qin; Xu, Qian

2013-06-01

Chitosan-modified poly(lactic-co-glycolic acid) nanoparticles (CHI/PLGA NPs) loaded with 7-ethyl-10-hydroxycamptothecin (SN-38), named CHI/PLGA/SN-38 NPs, were successfully prepared using an oil-in-water (O/W) solvent evaporation method. The physicochemical properties of the novel NPs were characterized by DLS, Zeta potential, SEM, DSC, XRD, and FTIR. The encapsulation efficiency and drug loading content were 71.83 (±2.77)% and 6.79 (±0.26)%, respectively. In vitro drug release in the simulated gastric juice was lower than that in the intestinal juice. In situ single-pass intestinal perfusion (SPIP) studies indicated a dramatic improvement of drug absorption as a result of the synergistic effect between CHI and PLGA on P-glycoprotein (Pgp) inhibition. CHI/PLGA NPs showed high cellular uptake and low efflux for drugs in Caco-2 cells. The cytotoxicity studies revealed that CHI/PLGA NPs had a transient effect on the membrane integrity, but did not have an influence on cell viability. Based on the in vitro release studies, SPIP, and intracellular drug accumulation and transport investigations, we speculate rationally that CHI/PLGA NPs were mainly internalized in the form of intact NPs, thus escaping the recognition of enterocyte Pgp and avoiding efflux into the apical part of the enterocytes. After partial release of drugs inside the enterocytes, CHI/PLGA interfered with the microenvironment of Pgp and further weakened the Pgp-mediated efflux. Then, the drug-loaded NPs exited via the exocytose effect from the basal part of the enterocytes and entered the blood circulation. These results showed that CHI/PLGA NPs would be smart oral delivery carriers for antineoplastic agents that are also Pgp substrates.

The Interactions of P-Glycoprotein with Antimalarial Drugs, Including Substrate Affinity, Inhibition and Regulation

PubMed Central

Senarathna, S M D K Ganga; Page-Sharp, Madhu; Crowe, Andrew

2016-01-01

The combination of passive drug permeability, affinity for uptake and efflux transporters as well as gastrointestinal metabolism defines net drug absorption. Efflux mechanisms are often overlooked when examining the absorption phase of drug bioavailability. Knowing the affinity of antimalarials for efflux transporters such as P-glycoprotein (P-gp) may assist in the determination of drug absorption and pharmacokinetic drug interactions during oral absorption in drug combination therapies. Concurrent administration of P-gp inhibitors and P-gp substrate drugs may also result in alterations in the bioavailability of some antimalarials. In-vitro Caco-2 cell monolayers were used here as a model for potential drug absorption related problems and P-gp mediated transport of drugs. Artemisone had the highest permeability at around 50 x 10−6 cm/sec, followed by amodiaquine around 20 x 10−6 cm/sec; both mefloquine and artesunate were around 10 x 10−6 cm/sec. Methylene blue was between 2 and 6 x 10−6 cm/sec depending on the direction of transport. This 3 fold difference was able to be halved by use of P-gp inhibition. MRP inhibition also assisted the consolidation of the methylene blue transport. Mefloquine was shown to be a P-gp inhibitor affecting our P-gp substrate, Rhodamine 123, although none of the other drugs impacted upon rhodamine123 transport rates. In conclusion, mefloquine is a P-gp inhibitor and methylene blue is a partial substrate; methylene blue may have increased absorption if co-administered with such P-gp inhibitors. An upregulation of P-gp was observed when artemisone and dihydroartemisinin were co-incubated with mefloquine and amodiaquine. PMID:27045516

Rapid Sediment Accumulation Results in High Methane Effluxes from Coastal Sediments

PubMed Central

Lenstra, Wytze; Jong, Dirk; Meysman, Filip J. R.; Sapart, Célia J.; van der Veen, Carina; Röckmann, Thomas; Gonzalez, Santiago; Slomp, Caroline P.

2016-01-01

Globally, the methane (CH4) efflux from the ocean to the atmosphere is small, despite high rates of CH4 production in continental shelf and slope environments. This low efflux results from the biological removal of CH4 through anaerobic oxidation with sulfate in marine sediments. In some settings, however, pore water CH4 is found throughout the sulfate-bearing zone, indicating an apparently inefficient oxidation barrier for CH4. Here we demonstrate that rapid sediment accumulation can explain this limited capacity for CH4 removal in coastal sediments. In a saline coastal reservoir (Lake Grevelingen, The Netherlands), we observed high diffusive CH4 effluxes from the sediment into the overlying water column (0.2–0.8 mol m-2 yr-1) during multiple years. Linear pore water CH4 profiles and the absence of an isotopic enrichment commonly associated with CH4 oxidation in a zone with high rates of sulfate reduction (50–170 nmol cm-3 d-1) both suggest that CH4 is bypassing the zone of sulfate reduction. We propose that the rapid sediment accumulation at this site (~ 13 cm yr-1) reduces the residence time of the CH4 oxidizing microorganisms in the sulfate/methane transition zone (< 5 years), thus making it difficult for these slow growing methanotrophic communities to build-up sufficient biomass to efficiently remove pore water CH4. In addition, our results indicate that the high input of organic matter (~ 91 mol C m-2 yr-1) allows for the co-occurrence of different dissimilatory respiration processes, such as (acetotrophic) methanogenesis and sulfate reduction in the surface sediments by providing abundant substrate. We conclude that anthropogenic eutrophication and rapid sediment accumulation likely increase the release of CH4 from coastal sediments. PMID:27560511

Influence of stand density on soil CO2 efflux for a Pinus densiflora forest in Korea.

PubMed

Noh, Nam Jin; Son, Yowhan; Lee, Sue Kyoung; Yoon, Tae Kyung; Seo, Kyung Won; Kim, Choonsig; Lee, Woo-Kyun; Bae, Sang Won; Hwang, Jaehong

2010-07-01

We investigated the influence of stand density [938 tree ha(-1) for high stand density (HD), 600 tree ha(-1) for medium stand density (MD), and 375 tree ha(-1) for low stand density (LD)] on soil CO(2) efflux (R (S)) in a 70-year-old natural Pinus densiflora S. et Z. forest in central Korea. Concurrent with R (S) measurements, we measured litterfall, total belowground carbon allocation (TBCA), leaf area index (LAI), soil temperature (ST), soil water content (SWC), and soil nitrogen (N) concentration over a 2-year period. The R (S) (t C ha(-1) year(-1)) and leaf litterfall (t C ha(-1) year(-1)) values varied with stand density: 6.21 and 2.03 for HD, 7.45 and 2.37 for MD, and 6.96 and 2.23 for LD, respectively. In addition, R (S) was correlated with ST (R (2) = 0.77-0.80, P < 0.001) and SWC (R (2) = 0.31-0.35, P < 0.001). It appeared that stand density influenced R (S) via changes in leaf litterfall, LAI and SWC. Leaf litterfall (R (2) = 0.71), TBCA (R (2) = 0.64-0.87), and total soil N contents in 2007 (R (2) = 0.94) explained a significant amount of the variance in R (S) (P < 0.01). The current study showed that stand density is one of the key factors influencing R (S) due to the changing biophysical and environmental factors in P. densiflora.

Effects of nutrient and organic matter manipulation on carbon pools and fluxes in a young loblolly pine varietal stand on the lower coastal plain of South Carolina

Treesearch

Michael Tyree; John Seiler; Chris Maier

2010-01-01

Manipulation of site organic matter and nutrients, in addition to planting of superior genotypes will likely influence carbon fluxes from intensively managed forests. The objective of this research is to monitor total soil carbon dioxide (CO2) efflux (FS), microbial respiration (RH), and leaf gas...

The effect of water table fluctuation on soil respiration in a lower coastal plain forested wetland in the southeastern U.S.

Treesearch

Guofang Miao; Asko Noormets; Jean-Christophe Domec; Carl C. Trettin; Steve G. McNulty; Ge Sun; John S. King

2013-01-01

Anthropogenic and environmental pressures on wetland hydrology may trigger changes in carbon (C) cycling, potentially exposing vast amounts of soil C to rapid decomposition. We measured soil CO2 efflux (Rs) continuously from 2009 to 2010 in a lower coastal plain forested wetland in North Carolina, U.S., to characterize its...

Variation in foliar respiration and wood CO2 efflux rates among species and canopy layers in a wet tropical forest

Treesearch

Shinichi Asao; Ricardo Bedoya-Arrieta; Michael G. Ryan

2014-01-01

As tropical forests respond to environmental change, autotrophic respiration may consume a greater proportion of carbon fixed in photosynthesis at the expense of growth, potentially turning the forests into a carbon source. Predicting such a response requires that we measure and place autotrophic respiration in a complete carbon budget, but extrapolating measurements...

Volume-activated trimethylamine oxide efflux in red blood cells of spiny dogfish (Squalus acanthias).

PubMed

Koomoa, D L; Musch, M W; MacLean, A V; Goldstein, L

2001-09-01

The aims of this study were to determine the pathway of swelling-activated trimethylamine oxide (TMAO) efflux and its regulation in spiny dogfish (Squalus acanthias) red blood cells and compare the characteristics of this efflux pathway with the volume-activated osmolyte (taurine) channel present in erythrocytes of fishes. The characteristics of the TMAO efflux pathway were similar to those of the taurine efflux pathway. The swelling-activated effluxes of both TMAO and taurine were significantly inhibited by known anion transport inhibitors (DIDS and niflumic acid) and by the general channel inhibitor quinine. Volume expansion by hypotonicity, ethylene glycol, and diethyl urea activated both TMAO and taurine effluxes similarly. Volume expansion by hypotonicity, ethylene glycol, and diethyl urea also stimulated the activity of tyrosine kinases p72syk and p56lyn, although the stimulations by the latter two treatments were less than by hypotonicity. The volume activations of both TMAO and taurine effluxes were inhibited by tyrosine kinase inhibitors, suggesting that activation of tyrosine kinases may play a role in activating the osmolyte effluxes. These results indicate that the volume-activated TMAO efflux occurs via the organic osmolyte (taurine) channel and may be regulated by the volume activation of tyrosine kinases.

Effect of levofloxacin, pazufloxacin, enrofloxacin, and meloxicam on the immunolocalization of ABCG-2 transporter protein in rabbit retina.

PubMed

Khan, Adil Mehraj; Rampal, Satyavan; Sood, Naresh Kumar

2018-03-01

Adenosine triphosphate-binding cassette (ABC) sub-family G member-2 (ABCG-2) is a transporter protein, implicated for multi-drug efflux from tissues. This study evaluated the effect of fluoroquinolones; levofloxacin, pazufloxacin and enrofloxacin, and non-steroidal anti-inflammatory drug, meloxicam; on the immunolocalization of ABCG-2 transporter protein of rabbit retinas. Thirty-two male rabbits were randomly divided in to eight groups. Control group was gavaged, 2% benzyl alcohol in 5% dextrose since these chemicals are excipients of the drug preparations used in the treatment groups of this study. Four groups were exclusively gavaged, levofloxacin hemihydrate (10 mg/kg body weight b.i.d 12 h), pazufloxacin mesylate (10 mg/kg body weight b.i.d 12 h), enrofloxacin (20 mg/kg body weight o.d.), and meloxicam (0.2 mg/kg body weight o.d.), respectively. Three other groups were co-gavaged meloxicam with above fluoroquinolones, respectively. These drugs were administered for 21 days. ABCG-2 immunolocalization was mild in the retinas of control and levofloxacin-alone-treated groups. The immunolocalization intensity was significantly higher in meloxicam-alone-treated group when compared to control and levofloxacin-alone-treated groups. Immunolocalization of this transporter increased in the levofloxacin-meloxicam co-treated group when compared to the levofloxacin-alone-treated group. Highest immunolocalization was observed in the enrofloxacin-meloxicam co-treated group although the immunolocalization of all treatment groups, except the levofloxacin-alone-treated group, was significantly higher than the control and levofloxacin-alone-treated groups.

Differences in the expression of endogenous efflux transporters in MDR1-transfected versus wildtype cell lines affect P-glycoprotein mediated drug transport

PubMed Central

Kuteykin-Teplyakov, Konstantin; Luna-Tortós, Carlos; Ambroziak, Kamila; Löscher, Wolfgang

2010-01-01

Background and purpose: P-glycoprotein (Pgp) efflux assays are widely used to identify Pgp substrates. The kidney cell lines Madin-Darby canine kidney (MDCK)-II and LLC-PK1, transfected with human MDR1 (ABCB1) are used to provide recombinant models of drug transport. Endogenous transporters in these cells may contribute to the activities of recombinant transporters, so that drug transport in MDR1-transfected cells is often corrected for the transport obtained in parental (wildtype) cells. However, expression of endogenous transporters may vary between transfected and wildtype cells, so that this correction may cause erroneous data. Here, we have measured the expression of endogenous efflux transporters in transfected and wildtype MDCK-II or LLC cells and the consequences for Pgp-mediated drug transport. Experimental approach: Using quantitative real-time RT-PCR, we determined the expression of endogenous Mdr1 mRNA and other efflux transporters in wildtype and MDR1-transfected MDCK-II and LLC cells. Transcellular transport was measured with the test substrate vinblastine. Key results: In MDR1-transfected MDCK cells, expression of endogenous (canine) Mdr1 and Mrp2 (Abcc2) mRNA was markedly lower than in wildtype cells, whereas MDR1-transfected LLC cells exhibited comparable Mdr1 but strikingly higher Mrp2 mRNA levels than wildtype cells. As a consequence, transport of vinblastine by human Pgp in efflux experiments was markedly underestimated when transport in MDR1-transfected MDCK cells was corrected for transport obtained in wildtype cells. This problem did not occur in LLC cells. Conclusions and implications: Differences in the expression of endogenous efflux transporters between transfected and wildtype MDCK cells provide a potential bias for in vitro studies on Pgp-mediated drug transport. PMID:20590635

K(+)- and HCO3(-)-dependent acid-base transport in squid giant axons. I. Base efflux

PubMed Central

1995-01-01

We used microelectrodes to monitor the recovery (i.e., decrease) of intracellular pH (pHi) after using internal dialysis to load squid giant axons with alkali to pHi values of 7.7, 8.0, or 8.3. The dialysis fluid (DF) contained 400 mM K+ but was free of Na+ and Cl-. The artificial seawater (ASW) lacked Na+, K+, and Cl-, thereby eliminating effects of known acid-base transporters on pHi. Under these conditions, halting dialysis unmasked a slow pHi decrease caused at least in part by acid-base transport we refer to as "base efflux." Replacing K+ in the DF with either NMDG+ or TEA+ significantly reduced base efflux and made membrane voltage (Vm) more positive. Base efflux in K(+)-dialyzed axons was stimulated by decreasing the pH of the ASW (pHo) from 8 to 7, implicating transport of acid or base. Although postdialysis acidifications also occurred in axons in which we replaced the K+ in the DF with Li+, Na+, Rb+, or Cs+, only with Rb+ was base efflux stimulated by low pHo. Thus, the base effluxes supported by K+ and Rb+ appear to be unrelated mechanistically to those observed with Li+, Na+, or Cs+. The combination of 437 mM K+ and 12 mM HCO3- in the ASW, which eliminates the gradient favoring a hypothetical K+/HCO3- efflux, blocked pHi recovery in K(+)-dialyzed axons. However, the pHi recovery was not blocked by the combination of 437 mM Na+, veratridine, and CO2/HCO3- in the ASW, a treatment that inverts electrochemical gradients for H+ and HCO3- and would favor passive H+ and HCO3- fluxes that would have alkalinized the axon. Similarly, the recovery was not blocked by K+ alone or HCO3- alone in the ASW, nor was it inhibited by the K-H pump blocker Sch28080 nor by the Na-H exchange inhibitors amiloride and hexamethyleneamiloride. Our data suggest that a major component of base efflux in alkali-loaded axons cannot be explained by metabolism, a H+ or HCO3- conductance, or by a K-H exchanger. However, this component could be mediated by a novel K/HCO3- cotransporter. PMID:8648294

Hydrologic Profiling for Greenhouse Gases from Prairie Potholes in Western Canada

NASA Astrophysics Data System (ADS)

Creed, I. F.; Aldred, D. A.; Bourbonniere, R. A.

2010-12-01

The Prairie Pothole Region is a unique physiographic region covering a large portion of the central Great Plains of North America that is populated by shallow depressions or “potholes” of varying size. Potholes typically fill with water after snowmelt, forming ephemeral or permanent ponds surrounded by concentric bands of soils with water contents. These ponds vary both in space and time, defining the “hydrologic profile” of the pothole. We tested the hypothesis that hydrologic profiles are important drivers of biogeochemical activity, including the transport of the greenhouse gas (GHG) precursors, which influence GHG exchanges from contributing source areas towards the ponds. Potholes at five study nodes along a N-S climatic gradient in south central Saskatchewan (with precipitation-potential evapotranspiration ranging from -520 mm/yr to -270 mm/yr) were selected for study. Topographic features representing positions along the hydrologic profile from dry to wet (crest, shoulder, backslope, footslope and toeslope) were derived through digital terrain analysis of LiDAR digital elevation models (DEMs) and were used as the basis for satellite (Radarsat-1) estimates of soil water content. The satellite derived soil water contents were then related to CO2, CH4 and N2O GHG effluxes during the growing season (May to September). Within potholes, nonlinear relationships between hydrological profiles and soil GHG effluxes were observed. In general, backslopes yielded the highest N2O fluxes, footslopes and toeslopes yielded the highest CO2, and inundated portions of the pothole yielded the highest CH4. However, the magnitude of GHG effluxes varied over the growing season, with peak magnitudes typically occurring in late summer. Among the study nodes, GHG global warming potential decreased from south (dry) to north (wet). These findings illustrate that static topographic features derived from LiDAR DEMs can be fused with dynamic soil water contents derived from radar satellite imagery to predict the changing nature of hydrologic controls on GHG dynamics in prairie pothole landscapes.

Multidrug-Resistant CTX-M-(15, 9, 2)- and KPC-2-Producing Enterobacter hormaechei and Enterobacter asburiae Isolates Possessed a Set of Acquired Heavy Metal Tolerance Genes Including a Chromosomal sil Operon (for Acquired Silver Resistance).

PubMed

Andrade, Leonardo N; Siqueira, Thiago E S; Martinez, Roberto; Darini, Ana Lucia C

2018-01-01

Bacterial resistance to antibiotics is concern in healthcare-associated infections. On the other hand, bacterial tolerance to other antimicrobials, like heavy metals, has been neglected and underestimated in hospital pathogens. Silver has long been used as an antimicrobial agent and it seems to be an important indicator of heavy metal tolerance. To explore this perspective, we searched for the presence of acquired silver resistance genes ( sil operon: silE, silS, silR, silC, silF, silB, silA , and silP ) and acquired extended-spectrum cephalosporin and carbapenem resistance genes ( bla CTX-M and bla KPC ) in Enterobacter cloacae Complex (EcC) ( n = 27) and Enterobacter aerogenes ( n = 8) isolated from inpatients at a general hospital. Moreover, the genetic background of the silA (silver-efflux pump) and the presence of other acquired heavy metal tolerance genes, pcoD (copper-efflux pump), arsB (arsenite-efflux pump), terF (tellurite resistance protein), and merA (mercuric reductase) were also investigated. Outstandingly, 21/27 (78%) EcC isolates harbored silA gene located in the chromosome. Complete sil operon was found in 19/21 silA -positive EcC isolates. Interestingly, 8/20 (40%) E. hormaechei and 5/6 (83%) E. asburiae co-harbored silA/pcoD genes and bla CTX-M-(15,2,or9) and/or bla KPC-2 genes. Frequent occurrences of arsB, terF , and merA genes were detected, especially in silA/pcoD -positive, multidrug-resistant (MDR) and/or CTX-M-producing isolates. Our study showed co-presence of antibiotic and heavy metal tolerance genes in MDR EcC isolates. In our viewpoint, there are few studies regarding to bacterial heavy metal tolerance and we call attention for more investigations and discussion about this issue in different hospital pathogens.

Multidrug-Resistant CTX-M-(15, 9, 2)- and KPC-2-Producing Enterobacter hormaechei and Enterobacter asburiae Isolates Possessed a Set of Acquired Heavy Metal Tolerance Genes Including a Chromosomal sil Operon (for Acquired Silver Resistance)

PubMed Central

Andrade, Leonardo N.; Siqueira, Thiago E. S.; Martinez, Roberto; Darini, Ana Lucia C.

2018-01-01

Bacterial resistance to antibiotics is concern in healthcare-associated infections. On the other hand, bacterial tolerance to other antimicrobials, like heavy metals, has been neglected and underestimated in hospital pathogens. Silver has long been used as an antimicrobial agent and it seems to be an important indicator of heavy metal tolerance. To explore this perspective, we searched for the presence of acquired silver resistance genes (sil operon: silE, silS, silR, silC, silF, silB, silA, and silP) and acquired extended-spectrum cephalosporin and carbapenem resistance genes (blaCTX−M and blaKPC) in Enterobacter cloacae Complex (EcC) (n = 27) and Enterobacter aerogenes (n = 8) isolated from inpatients at a general hospital. Moreover, the genetic background of the silA (silver-efflux pump) and the presence of other acquired heavy metal tolerance genes, pcoD (copper-efflux pump), arsB (arsenite-efflux pump), terF (tellurite resistance protein), and merA (mercuric reductase) were also investigated. Outstandingly, 21/27 (78%) EcC isolates harbored silA gene located in the chromosome. Complete sil operon was found in 19/21 silA-positive EcC isolates. Interestingly, 8/20 (40%) E. hormaechei and 5/6 (83%) E. asburiae co-harbored silA/pcoD genes and blaCTX−M−(15,2,or9) and/or blaKPC−2 genes. Frequent occurrences of arsB, terF, and merA genes were detected, especially in silA/pcoD-positive, multidrug-resistant (MDR) and/or CTX-M-producing isolates. Our study showed co-presence of antibiotic and heavy metal tolerance genes in MDR EcC isolates. In our viewpoint, there are few studies regarding to bacterial heavy metal tolerance and we call attention for more investigations and discussion about this issue in different hospital pathogens. PMID:29628916

Enhanced cadmium efflux and root-to-shoot translocation are conserved in the hyperaccumulator Sedum alfredii (Crassulaceae family).

PubMed

Zhang, Zhongchun; Yu, Qi; Du, Hanying; Ai, Wenli; Yao, Xuan; Mendoza-Cózatl, David G; Qiu, Baosheng

2016-06-01

Investigation on the molecular mechanisms of cadmium hyperaccumulation has been mostly focused on members of the Brassicaceae family. Here, we show using hyperaccumulating (HP) and nonhyperaccumulating (NHP) populations of Sedum alfredii (Crassulaceae), that Cd hypertolerance correlates with higher Cd efflux rates and less cadmium accumulation in suspension cells and roots. The heavy metal ATPase HMA2, but not HMA4, was highly expressed in suspension cultures and roots from HP plants compared to NHP cells and plants. Reciprocal grafting also showed that Cd translocation is more efficient in HP plants. These results suggest that cadmium efflux is a conserved mechanism among natural cadmium hyperaccumulator species. © 2016 Federation of European Biochemical Societies.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Halvorsen, Bente, E-mail: Bente.Halvorsen@rr-research.no; Institute of Clinical Medicine, University of Oslo, Oslo; K.G. Jebsen Inflammation Research Center, University of Oslo, Oslo

Highlights: • IL-10 promotes reverse cholesterol efflux from lipid loaded macrophages. • IL-10 increases the expression of ABCA-1 and ABCG-1. • IL-10 exhibits cross-talk with the nuclear receptor LXRα. - Abstract: Interleukin (IL)-10 is a prototypical anti-inflammatory cytokine that has been shown to attenuate atherosclerosis development. In addition to its anti-inflammatory properties, the anti-atherogenic effect of IL-10 has recently also been suggested to reflect a complex effect of IL-10 on lipid metabolism in macrophages. In the present study we examined the effects of IL-10 on cholesterol efflux mechanism in lipid-loaded THP-1 macrophages. Our main findings were: (i) IL-10 significantly enhancedmore » cholesterol efflux induced by fetal-calf serum, high-density lipoprotein (HDL){sub 2} and apolipoprotein A-1. (ii) The IL-10-mediated effects on cholesterol efflux were accompanied by an increased IL-10-mediated expression of the ATP-binding cassette transporters ABCA1 and ABCG1, that was further enhanced when the cells were co-activated with the liver X receptor (LXR)α agonist (22R)-hydroxycholesterol. (iii) The effect of LXRα activation on the IL-10-mediated effects on the ATP-binding cassette transporters seems to include enhancing effects on the IL-10 receptor 1 (IL10R1) expression and interaction with STAT-3 signaling. (iv) These enhancing effects on ABCA1 and ABCG1 was not seen when the cells were stimulated with the IL-10 family members IL-22 and IL-24. This study suggests that the anti-atherogenic properties of IL-10 may include enhancing effects on cholesterol efflux mechanism that involves cross-talk with LXRα activation.« less

Inhibition of PRMT3 activity selectively impairs LXR-driven transcription of hepatic lipogenic genes in vivo.

PubMed

Nahon, Joya E; Groeneveldt, Christianne; Geerling, Janine J; Van Eck, Miranda; Hoekstra, Menno

2018-05-18

Agonists for the liver X receptor (LXR) are considered promising therapeutic moieties in cholesterol-driven diseases by promoting cellular cholesterol efflux pathways. However, current clinical application of these agents is hampered by the concomitant LXR-induced activation of a lipogenic transcriptional network, leading to hepatic steatosis. Recent studies have suggested that protein arginine methyltransferase 3 (PRMT3) may act as a selective co-activator of LXR activity. Here we verified the hypothesis that PRMT3 inhibition selectively disrupts the ability of LXR to stimulate lipogenesis, while maintaining the capacity of LXR to modulate macrophage cholesterol homeostasis. A combination of the LXR agonist T0901317 and palm oil was administered to C57BL/6 mice to maximally stimulate LXR and PRMT3 activity. PRMT3 activity was inhibited using the allosteric inhibitor SGC707. Treatment with the PRMT3 inhibitor SGC707 did not negatively influence the T0901317/palm oil induced upregulation of the cholesterol efflux genes ABCA1 and ABCG1 in peritoneal cells. In contrast, SGC707 treatment was associated with a significant decrease in the hepatic expression of the lipogenic gene FAS (-64%). A similar trend was observed for SCD1 and ACC expression (-43%; -56%) This obstruction of lipogenic gene transcription coincided with a significant 2.3-fold decrease in liver triglyceride content as compared to the T0901317 and palm oil treated control group. We have shown that inhibition of PRMT3 activity by SGC707 treatment selectively impairs LXR-driven transcription of hepatic lipogenic genes, while the positive effect of LXR stimulation on macrophage cholesterol efflux pathways is maintained. This article is protected by copyright. All rights reserved.

The drug efflux pump Pgp1 in pro-inflammatory lymphocytes is a target for novel treatment strategies in COPD.

PubMed

Hodge, Greg; Holmes, Mark; Jersmann, Hubertus; Reynolds, Paul N; Hodge, Sandra

2013-06-03

Pro-inflammatory/cytotoxic T cells (IFNγ, TNFα, granzyme B+) are increased in the peripheral circulation in COPD. NKT-like and NK cells are effector lymphocytes that we have also shown to be major sources of pro-inflammatory cytokines and granzymes. P-glycoprotein 1 (Pgp1) is a transmembrane efflux pump well characterised in drug resistant cancer cells. We hypothesized that Pgp1 would be increased in peripheral blood T, NKT-like and NK cells in patients with COPD, and that this would be accompanied by increased expression of IFNγ, TNFα and granzyme B. We further hypothesized that treatment with cyclosporine A, a Pgp1 inhibitor, would render cells more sensitive to treatment with corticosteroids. Pgp1, granzyme B, IFNγ and TNFα expression were measured in peripheral blood T, NK and NKT-like cells from COPD patients and control subjects (± cyclosporine A and prednisolone) following in vitro stimulation and results correlated with uptake of efflux dye Calcein-AM using flow cytometry. There was increased Pgp1 expression by peripheral blood T, NKT-like and NK cells co-expressing IFNγ, TNFα and granzyme B in COPD patients compared with controls (e.g. %IFNγ/Pgp1 T, NKT-like, NK for COPD (Control): 25(6), 54(27), 39(23)). There was an inverse correlation between Pgp1 expression and Calcein-AM uptake. Treatment with 2.5 ng/ml cylosporin A and10-6 M prednisolone resulted in synergistic inhibition of pro-inflammatory cytokines in Pgp1 + cells (p < 0.05 for all). Treatment strategies that target Pgp1 in T, NKT-like and NK cells may reduce systemic inflammatory mediators in COPD and improve patient morbidity.

Comparing ecosystem and soil respiration: Review and key challenges of tower-based and soil measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barba, Josep; Cueva, Alejandro; Bahn, Michael

The net ecosystem exchange (NEE) is the difference between ecosystem CO2 assimilation and CO2 losses to the atmosphere. Ecosystem respiration (Reco), the efflux of CO2 from the ecosystem to the atmosphere, includes the soil-to-atmosphere carbon flux (i.e., soil respiration; Rsoil) and aboveground plant respiration. Therefore, Rsoil is a fraction of Reco and by definition has to be smaller than Reco at annual, seasonal and daily scales. However, several studies estimating Reco with the eddy covariance technique and measuring Rsoil within the footprint of the tower have reported higher Rsoil than Reco at different time scales. Here, we compare four differentmore » and contrasting ecosystems (from forest to grasslands, and from boreal to semiarid) to study whether, and under what conditions, measurements of Reco are lower than Rsoil. In general, both fluxes showed similar temporal patterns, but Reco was not consistently higher than Rsoil from daily to annual scales across sites. We identified several issues that apply for measuring NEE and measuring/upscaling Rsoil that could result in an underestimation of Reco and/or an overestimation of Rsoil. These issues are discussed based on (a) nighttime measurements of NEE, (b) Rsoil measurements, and (c) the interpretation of the functional relationships of these fluxes with temperature (i.e., Q10). We highlight that there is still a need for better integration of Rsoil with eddy covariance measurements to address challenges related to spatial and temporal variability of Reco and Rsoil.« less

Nature based solutions to mitigate soil sealing in urban areas: Results from a 4-year study comparing permeable, porous, and impermeable pavements.

PubMed

Fini, A; Frangi, P; Mori, J; Donzelli, D; Ferrini, F

2017-07-01

Soil sealing is one of the most pervasive forms of soil degradation that follows urbanization and, despite innovative pavements (i.e. pervious) are being installed in urban areas to mitigate it, there is little research on the effects of pervious pavements on soil water and carbon cycle and on the physiology of urban trees. The aim of this 4-year experiment was to assess the effects of three pavements, differing in permeability to water and gases, on some soil physical parameters, and on growth and physiology of newly planted Celtis australis and Fraxinus ornus. Treatments were: 1) impermeable pavement (asphalt on concrete sub-base); 2) permeable pavement (pavers on crushed rock sub-base); 3) porous design (porous pavement on crushed rock sub-base); 4) control (unpaved soil, kept free of weed by chemical control). Soil (temperature, moisture, oxygen content and CO 2 efflux) and plant (above- and below-ground growth, leaf gas exchange, chlorophyll fluorescence, water relations) parameters were measured. All types of pavements altered the water cycle compared to unpaved soil plots, but this disturbance was less intense in porous pavements than in other soil cover types. Porous pavements allowed both higher infiltration and evaporation of water than both pavers and asphalt. Reduction of evaporative cooling from soil paved with permeable and impermeable pavements contributed to significant soil warming: at 20cm depth, soils under concrete pavers and asphalt were 4 and 5°C warmer than soil covered by porous pavements and unpaved soils, respectively. Thus, enhancing evaporation from paved soil by the use of porous pavements may contribute to mitigating urban heat islands. CO 2 greatly accumulated under impermeable and permeable pavements, but not under porous pavements, which showed CO 2 efflux rates similar to control. Soil oxygen slightly decreased only beneath asphalt. Growth of newly planted C. australis and F. ornus was little affected by pavement type. Tree transpiration rapidly depleted soil moisture compared to the not-planted scenario, but soil moisture did not fall below wilting point (particularly in the deeper soil layers, i.e. 40-50cm) in any treatment. While C. australis showed similar leaf gas exchange and water relations in all treatments, F. ornus showed a depression in CO 2 assimilation and slight signs of stress of the photosynthetic apparatus when planted in soil covered with impermeable pavement. The effects of soil cover with different materials on tree growth and physiology were little, because newly planted trees have most of their roots still confined in the unpaved planting pit. Still, the reduction of soil sealing around the planting pit triggered the establishment of sensitive species such as ash. Further research is needed to assess the effects of different pavement types on established, larger trees. Copyright © 2017 Elsevier Inc. All rights reserved.

Integrating time-series and spatial surveys to assess annual, lake-wide emissions of carbon dioxide and methane from a eutrophic lake

NASA Astrophysics Data System (ADS)

Loken, L. C.; Crawford, J.; Schramm, P.; Stadler, P.; Stanley, E. H.

2017-12-01

Lakes are important regulators of global carbon cycling and conduits of greenhouse gases to the atmosphere; however, most efflux estimates for individual lakes are based on extrapolations from a limited number of locations. Within-lake variability in carbon dioxide (CO2) and methane (CH4) arises from differences in water sources, physical mixing, and biogeochemical transformations; all of which can vary at multiple temporal and spatial scales. We mapped surface water concentrations of CO2 and CH4 weekly across Lake Mendota (a 39.9 km2 eutrophic lake in Wisconsin, USA) spanning the majority of the 2016 ice-free season (249 days). Combining these maps with a spatially explicit gas transfer velocity (k) model, we estimated the diffusive exchange of both gases with the atmosphere taking into account both spatial and temporal heterogeneity. The cumulative efflux of CO2 (85.3 Mmol) and CH4 (9.47 Mmol) was positive, indicating that on the annual scale Lake Mendota was a net-source of both gases to the atmosphere. Although our model included variability in k, flux patterns reflected the patterns in gas concentrations. During the stratified period, CO2 was generally undersaturated throughout the pelagic zone due to high primary production and differed near river inlets and shorelines. The lake was routinely extremely supersaturated with CH4 with elevated concentrations in expansive littoral areas. During fall mixis, concentrations of both gases increased and became more variable across the lake surface, and their spatial arrangement changed reflecting hypolimentic mixing. In this system, samples collected from the lake center reasonably well-represented the lake-wide mean CO2 concentration, but they poorly represented CH4. While metabolic processes driving CO2 varied across the lake surface, pelagic phytoplankton contributed extensively to overall primary production, which acted at the lake-wide scale. Additionally Lake Mendota's high alkalinity may have masked the metabolic imprint on CO2 patterns. In contrast, heterogeneous CH4 transformations and transport lead to remarkable variation in CH4 across the lake surface that was dynamic through time. Thus, extrapolations from a limited number of locations or timepoints may not adequately describe lake-wide CH4 dynamics.

Comparative study of the active cadmium efflux systems operating at the plasma membrane and tonoplast of cucumber root cells.

PubMed

Migocka, Magdalena; Papierniak, Anna; Kosatka, Ewelina; Klobus, Grazyna

2011-10-01

The strategies developed by plants to avoid the toxicity of cadmium (Cd) and other heavy metals involve active sequestration of metals into the apoplast and vacuoles. The protein systems excluding heavy metals from the cell cytosol localize to the plasma membrane and tonoplast and are energized either by ATP or by the electrochemical gradient generated by H(+)-ATPase or by V-ATPase and pyrophosphatase (PPase), respectively. In this work, a comparative study on the contribution of both the plasma membrane and tonoplast in the active detoxification of plant cells after treatment with Cd was performed. The studies using plants treated and untreated with Cd reveal that both, H(+)-coupled and MgATP-driven efflux of Cd across plasma membranes and tonoplast is markedly stimulated in the presence of Cd in the environment. Previous studies on plasma-membrane localized H(+)-coupled Cd efflux together with the present data demonstrating tonoplast H(+)/Cd(2+) antiport activity suggest that H(+)-coupled secondary transport of Cd displays a lower affinity for Cd when compared with Cd primary pumps driven by MgATP. In addition, it is shown that MgATP-energized Cd efflux across both membranes is significantly enhanced by cysteine, dithiothreitol, and glutathione. These results suggest that Cd is excluded from the cytosol through an energy-dependent system as a free ion as well as a complexed form. Although both membranes contribute in the active exclusion of ionized and complexed Cd from the cytosol, the overall calculation of Cd accumulation in the everted plasma membranes and vacuolar vesicles suggests that the tonoplast and vacuole have a major function in Cd efflux from the cytosol in the roots of cucumber subjected to Cd stress.

Carbon dioxide supersaturation in the surface waters of lakes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cole, J.J.; Caraco, N.F.; Kling, G.W.

1994-09-09

Data on the partial pressure of carbon dioxide (CO{sub 2}) in the surface waters from a large number of lakes (1835) with a worldwide distribution show that only a small proportion of the 4665 samples analyzed (less than 10 percent) were within {+-}20 percent of equilibrium with the atmosphere and that most samples (87 percent) were supersaturated. The mean partial pressure of CO{sub 2} averaged 1036 microatmospheres, about three times the value in the overlying atmosphere, indicating that lakes are sources rather than sinks of atmospheric CO{sub 2}. On a global scale, the potential efflux of CO{sub 2} from lakesmore » (about 0.14 x 10{sup 15} grams of carbon per year) is about half as large as riverine transport of organic plus inorganic carbon to the ocean. Lakes are a small but potentially important conduit for carbon for terrestrial sources to the atmospheric sink. 18 refs., 2 figs., 1 tab.« less

Whole-tree and forest floor removal from a loblolly pine plantation have no effect on forest floor CO2 efflux 10 years after harvest

Treesearch

John R. Butnor; Kurt H. Johnsen; Felipe G. Sanchez

2006-01-01

Intensive management of southern pine plantations has yielded multifold increases in productivity over the last half century. The process of harvesting merchantable material and preparing a site for planting can lead to a considerable loss of organic matter. Intensively managed stands may experience more frequent disturbance as rotations decrease in length, exposing...

Influences of thinning, prescribed burning, and wildfire on soil processes and properties in southwestern ponderosa pine forests: A retrospective study

Treesearch

Kevin C. Grady; Stephen C. Hart

2006-01-01

Following Euro-American settlement in the late 1800s, fire suppression and livestock grazing in ponderosa pine-bunchgrass ecosystems of the southwestern US resulted in the replacement of grass openings with dense stands of ponderosa pine. This, in turn, has led to apparent decreases in decomposition, net N mineralization, and soil respiration (i.e., net soil CO2 efflux...

Effect of acute administration of hypericum perforatum-CO2 extract on dopamine and serotonin release in the rat central nervous system.

PubMed

Di Matteo, V; Di Giovanni, G; Di Mascio, M; Esposito, E

2000-01-01

The hydromethanolic extract of Hypericum perforatum has been shown to be an effective antidepressant, although its mechanism of action is still unclear. In this study, in vivo microdialysis was used to investigate the effects of Hypericum perforatum-CO2 extract on dopamine (DA), 3,4-dihydroxyphenylacetic acid (DOPAC), serotonin (5-HT), and 5-hydroxyindoleacetic acid (5-HIAA) release in various areas of brain. Administration of Hypericum perforatum extract (1 mg/kg, p.o.) caused a slight, but significant increase of DA outflow both in the nucleus accumbens and the striatum. The maximal increase of DA efflux (+19.22+/-1.93%, relative to the control group) in the nucleus accumbens occurred 100 min after administration of Hypericum perforatum. In the striatum, the extract maximally enhanced DA outflow (+24.83+/-7.49 %, relative to the control group) 80 min after administration. Extraneuronal DOPAC levels were not significantly affected by Hypericum perforatum treatment. Moreover, Hypericum perforatum (1 mg/kg, p.o.) did not produce any significant effect on either 5-HT or 5-HIAA efflux in the ventral hippocampus. This study shows for the first time that Hypericum perforatum extract is capable of increasing in vivo DA release.

Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping

PubMed Central

Zhao, Mengxin; Xue, Kai; Wang, Feng; Liu, Shanshan; Bai, Shijie; Sun, Bo; Zhou, Jizhong; Yang, Yunfeng

2014-01-01

Despite microbes' key roles in driving biogeochemical cycles, the mechanism of microbe-mediated feedbacks to global changes remains elusive. Recently, soil transplant has been successfully established as a proxy to simulate climate changes, as the current trend of global warming coherently causes range shifts toward higher latitudes. Four years after southward soil transplant over large transects in China, we found that microbial functional diversity was increased, in addition to concurrent changes in microbial biomass, soil nutrient content and functional processes involved in the nitrogen cycle. However, soil transplant effects could be overridden by maize cropping, which was attributed to a negative interaction. Strikingly, abundances of nitrogen and carbon cycle genes were increased by these field experiments simulating global change, coinciding with higher soil nitrification potential and carbon dioxide (CO2) efflux. Further investigation revealed strong correlations between carbon cycle genes and CO2 efflux in bare soil but not cropped soil, and between nitrogen cycle genes and nitrification. These findings suggest that changes of soil carbon and nitrogen cycles by soil transplant and cropping were predictable by measuring microbial functional potentials, contributing to a better mechanistic understanding of these soil functional processes and suggesting a potential to incorporate microbial communities in greenhouse gas emission modeling. PMID:24694714

Gene regulation of plasmid- and chromosome-determined inorganic ion transport in bacteria.

PubMed Central

Silver, S; Walderhaug, M

1992-01-01

Regulation of chromosomally determined nutrient cation and anion uptake systems shows important similarities to regulation of plasmid-determined toxic ion resistance systems that mediate the outward transport of deleterious ions. Chromosomally determined transport systems result in accumulation of K+, Mg2+, Fe3+, Mn2+, PO4(3-), SO4(2-), and additional trace nutrients, while bacterial plasmids harbor highly specific resistance systems for AsO2-, AsO4(3-), CrO4(2-), Cd2+, Co2+, Cu2+, Hg2+, Ni2+, SbO2-, TeO3(2-), Zn2+, and other toxic ions. To study the regulation of these systems, we need to define both the trans-acting regulatory proteins and the cis-acting target operator DNA regions for the proteins. The regulation of gene expression for K+ and PO4(3-) transport systems involves two-component sensor-effector pairs of proteins. The first protein responds to an extracellular ionic (or related) signal and then transmits the signal to an intracellular DNA-binding protein. Regulation of Fe3+ transport utilizes the single iron-binding and DNA-binding protein Fur. The MerR regulatory protein for mercury resistance both represses and activates transcription. The ArsR regulatory protein functions as a repressor for the arsenic and antimony(III) efflux system. Although the predicted cadR regulatory gene has not been identified, cadmium, lead, bismuth, zinc, and cobalt induce this system in a carefully regulated manner from a single mRNA start site. The cadA Cd2+ resistance determinant encodes an E1(1)-1E2-class efflux ATPase (consisting of two polypeptides, rather than the one earlier identified). Cadmium resistance is also conferred by the czc system (which confers resistances to zinc and cobalt in Alcaligenes species) via a complex efflux pump consisting of four polypeptides. These two cadmium efflux systems are not otherwise related. For chromate resistance, reduced cellular accumulation is again the resistance mechanism, but the regulatory components are not identified. For other toxic heavy metals (with few exceptions), there exist specific plasmid resistances that remain relatively terra incognita for future exploration of bioinorganic molecular genetics and gene regulation. PMID:1579110

Lack of AcrB Efflux Function Confers Loss of Virulence on Salmonella enterica Serovar Typhimurium

PubMed Central

Wang-Kan, Xuan; Chirullo, Barbara; Betts, Jonathan; La Ragione, Roberto M.; Ivens, Alasdair; Ricci, Vito; Opperman, Timothy J.

2017-01-01

ABSTRACT AcrAB-TolC is the paradigm resistance-nodulation-division (RND) multidrug resistance efflux system in Gram-negative bacteria, with AcrB being the pump protein in this complex. We constructed a nonfunctional AcrB mutant by replacing D408, a highly conserved residue essential for proton translocation. Western blotting confirmed that the AcrB D408A mutant had the same native level of expression of AcrB as the parental strain. The mutant had no growth deficiencies in rich or minimal medium. However, compared with wild-type SL1344, the mutant had increased accumulation of Hoechst 33342 dye and decreased efflux of ethidium bromide and was multidrug hypersusceptible. The D408A mutant was attenuated in vivo in mouse and Galleria mellonella models and showed significantly reduced invasion into intestinal epithelial cells and macrophages in vitro. A dose-dependent inhibition of invasion was also observed when two different efflux pump inhibitors were added to the wild-type strain during infection of epithelial cells. RNA sequencing (RNA-seq) revealed downregulation of bacterial factors necessary for infection, including those in the Salmonella pathogenicity islands 1, 2, and 4; quorum sensing genes; and phoPQ. Several general stress response genes were upregulated, probably due to retention of noxious molecules inside the bacterium. Unlike loss of AcrB protein, loss of efflux function did not induce overexpression of other RND efflux pumps. Our data suggest that gene deletion mutants are unsuitable for studying membrane transporters and, importantly, that inhibitors of AcrB efflux function will not induce expression of other RND pumps. PMID:28720734

Exercise leads to the re-emergence of the cholinergic/nestin neuronal phenotype within the medial septum/diagonal band and subsequent rescue of both hippocampal ACh efflux and spatial behavior.

PubMed

Hall, Joseph M; Savage, Lisa M

2016-04-01

Exercise has been shown to improve cognitive functioning in a range of species, presumably through an increase in neurotrophins throughout the brain, but in particular the hippocampus. The current study assessed the ability of exercise to restore septohippocampal cholinergic functioning in the pyrithiamine-induced thiamine deficiency (PTD) rat model of the amnestic disorder Korsakoff Syndrome. After voluntary wheel running or sedentary control conditions (stationary wheel attached to the home cage), PTD and control rats were behaviorally tested with concurrent in vivo microdialysis, at one of two time points: 24-h or 2-weeks post-exercise. It was found that only after the 2-week adaption period did exercise lead to an interrelated sequence of events in PTD rats that included: (1) restored spatial working memory; (2) rescued behaviorally-stimulated hippocampal acetylcholine efflux; and (3) within the medial septum/diagonal band, the re-emergence of the cholinergic (choline acetyltransferase [ChAT+]) phenotype, with the greatest change occurring in the ChAT+/nestin+ neurons. Furthermore, in control rats, exercise followed by a 2-week adaption period improved hippocampal acetylcholine efflux and increased the number of neurons co-expressing the ChAT and nestin phenotype. These findings demonstrate a novel mechanism by which exercise can modulate the mature cholinergic/nestin neuronal phenotype leading to improved neurotransmitter function as well as enhanced learning and memory. Copyright © 2016 Elsevier Inc. All rights reserved.

Ion transport in rat liver mitochondria: the effect of the incubation medium osmolarity.

PubMed

Novgorodov, S A; Yaguzhinsky, L A

1985-04-08

A decrease in the incubation medium osmolarity from 320 to 120 mosM reverses the pH dependence of K+ efflux from rat liver mitochondria. The K+ efflux is no longer inhibited by oligomycin and a free radical scavenger butylhydroxytoluene. At 320 mosM, the addition of carbonyl cyanide 3-chlorophenylhydrazone (CCCP) accelerates the K+ efflux, while EGTA inhibits it. At 120 mosM these CCCP and EGTA effects are reversed. In either case the K+ efflux is inhibited by Mg2+. The decrease in osmolarity changes the ruthenium red-insensitive Ca2+ efflux in the same manner. It has thus been shown that the modification of the mitochondrial structure by changing the incubation medium osmolarity results in a qualitative alteration of the systems regulating the K+ and Ca2+ effluxes.

CASK interacts with PMCA4b and JAM-A on the Mouse Sperm Flagellum to Regulate Ca2+ Homeostasis and Motility1

PubMed Central

Aravindan, Rolands G.; Fomin, Victor P.; Naik, Ulhas P.; Modelski, Mark J.; Naik, Meghna U.; Galileo, Deni S.; Duncan, Randall L.; Martin-DeLeon, Patricia A.

2012-01-01

Deletion of the highly conserved gene for the major Ca2+ efflux pump, Plasma membrane calcium/calmodulin-dependent ATPase 4b (Pmca4b), in the mouse leads to loss of progressive and hyperactivated sperm motility and infertility. Here we first demonstrate that compared to wild-type (WT), Junctional adhesion molecule-A (Jam-A) null sperm, previously shown to have motility defects and an abnormal mitochondrial phenotype reminiscent of that seen in Pmca4b nulls, exhibit reduced (P<0.001) ATP levels, significantly (P<0.001) greater cytosolic Ca2+ concentration ([Ca2+]c) and ~10-fold higher mitochondrial sequestration, indicating Ca2+ overload. Investigating the mechanism involved, we used coimmunoprecipitation studies to show that CASK (Ca2+/calmodulin-dependent serine kinase), identified for the first time on the sperm flagellum where it co-localizes with both PMCA4b and JAM-A on the proximal principal piece, acts as a common interacting partner of both. Importantly, CASK binds alternatively and non-synergistically with each of these molecules via its single PDZ (PDS-95/Dlg/ZO-1) domain to either inhibit or promote efflux. In the absence of CASK-JAM-A interaction in Jam-A null sperm, CASK-PMCA4b interaction is increased, resulting in inhibition of PMCA4b’s enzymatic activity, consequent Ca2+ accumulation, and a ~6-fold over-expression of constitutively ATP-utilizing CASK, compared to WT. Thus, CASK negatively regulates PMCA4b by directly binding to it and JAM-A positively regulates it indirectly through CASK. The decreased motility is likely due to the collateral net deficit in ATP observed in nulls. Our data indicate that Ca2+ homeostasis in sperm is maintained by the relative ratios of CASK-PMCA4b and CASK-JAM-A interactions. PMID:22020416

CO2 dynamics on three habitats of mangrove ecosystem in Bintan Island, Indonesia

NASA Astrophysics Data System (ADS)

Dharmawan, I. W. E.

2018-02-01

Atmospheric carbon dioxide (CO2) has increased over time, implied on global warming and climate change. Blue carbon is one of interesting options to reduce CO2 concentration in the atmosphere. Indonesia has the largest mangrove area in the world which would be potential to mitigate elevated CO2 concentrations. A quantitative study on CO2 dynamic was conducted in the habitat-variable and pristine mangrove of Bintan island. The study was aimed to estimate CO2 flux on three different mangrove habitats, i.e., lagoon, oceanic and riverine. Even though all habitats were dominated by Rhizophora sp, they were significantly differed one another by species composition, density, and soil characteristics. Averagely, CO2 dynamics had the positive budget by ∼0.668 Mmol/ha (82.47%) which consisted of sequestration, decomposition, and soil efflux at 0.810 Mmol/ha/y, -0.125 Mmol/ha/y and -0.017 Mmol/ha/y, respectively. The study found that the fringing habitat had the highest CO2 capturing rate and the lowest rate of litter decomposition which was contrast to the riverine site. Therefore, oceanic mangrove was more efficient in controlling CO2 dynamics due to higher carbon storage on their biomass. A recent study also found that soil density and organic matter had a significant impact on CO2 dynamics.

Dryland ecosystem responses to precipitation extremes and wildfire at a long-term rainfall manipulation experiment

NASA Astrophysics Data System (ADS)

Brown, R. F.; Collins, S. L.

2017-12-01

Climate is becoming increasingly more variable due to global environmental change, which is evidenced by fewer, but more extreme precipitation events, changes in precipitation seasonality, and longer, higher severity droughts. These changes, combined with a rising incidence of wildfire, have the potential to strongly impact net primary production (NPP) and key biogeochemical cycles, particularly in dryland ecosystems where NPP is sequentially limited by water and nutrient availability. Here we utilize a ten-year dataset from an ongoing long-term field experiment established in 2007 in which we experimentally altered monsoon rainfall variability to examine how our manipulations, along with naturally occurring events, affect NPP and associated biogeochemical cycles in a semi-arid grassland in central New Mexico, USA. Using long-term regional averages, we identified extremely wet monsoon years (242.8 mm, 2013), and extremely dry monsoon years (86.0 mm, 2011; 80.0 mm, 2015) and water years (117.0 mm, 2011). We examined how changes in precipitation variability and extreme events affected ecosystem processes and function particularly in the context of ecosystem recovery following a 2009 wildfire. Response variables included above- and below-ground plant biomass (ANPP & BNPP) and abundance, soil nitrogen availability, and soil CO2 efflux. Mean ANPP ranged from 3.6 g m-2 in 2011 to 254.5 g m-2 in 2013, while BNPP ranged from 23.5 g m-2 in 2015 to 194.2 g m-2 in 2013, demonstrating NPP in our semi-arid grassland is directly linked to extremes in both seasonal and annual precipitation. We also show increased nitrogen deposition positively affects NPP in unburned grassland, but has no significant impact on NPP post-fire except during extremely wet monsoon years. While soil respiration rates reflect lower ANPP post-fire, patterns in CO2 efflux have not been shown to change significantly in that efflux is greatest following large precipitation events preceded by longer drying periods. Current land surface models poorly represent dryland ecosystems, which frequently undergo extreme weather events. Our long-term experiment provides key insights into ecosystem processes and function, thereby providing capacity for model improvement particularly in the context of future environmental change.

[Efflux systems in Serratia marcescens].

PubMed

Mardanova, A M; Bogomol'naia, L M; Romanova, Iu D; Sharipova, M R

2014-01-01

A widespread bacterium Serratia marcescens (family Enterobacteriaceae) is an opportunistic and exhibits multiple drug resistance. Active removal of antibiotics and other antimicrobials from pathogen and exhibits multiple drug resistance. Active removal of antibiotics and other antimicrobials from the cells by efflux systems is one of the mechanisms responsible for microbial resistance to these compounds. Among enterobacteria, efflux systems of Escherichia coli and Salmonella enterica var. Typhimurium have been studied most extensively. Few efflux systems that belong to different families have been reported for S. marcescens. In this review, we analyzed available literature about S. marcescens efflux systems and carried out the comparative analysis of the genes encoding the RND type systems in different Serratia species and in other enterobacteria. Bioinformatical analysis of the S. marcescens genome allowed us to identify the previously unknown efflux systems based on their homology with the relevant E. coli genes. Identification of additional efflux systems in S. marcescens genome will promote our understanding of physiology of these bacteria, will detect new molecular mechanisms of resistance and will reveal their resistance potential.

Insights into the Processing of Carbon by Early Microbial Ecosystems

NASA Technical Reports Server (NTRS)

DesMarais, D.; Bebout, B.; Carpenter, S.; Discipulo, S.; Londry, K.; Habicht, K.; Turk, K.

2003-01-01

Interactions between Earth and the biosphere that were crucial for early biological evolution also influenced substantially the processes that circulate C between its reservoirs in the atmosphere, ocean, crust and mantle. The C-13 C-12 values of crustal carbonates and organics have recorded changes both in biological discrimination and in the relative rates of burial of organics and carbonates. A full interpretation of these patterns needs further isotopic studies of microbial ecosystems and individual anaerobes. Thus we measured carbon isotope discrimination during autotrophic and heterotrophic growth of pure cultures of sulfate-reducing bacteria and archaea (SRB and SRA). Discrimination during CO2 assimilation is significantly larger than during heterotrophic growth on lactate or acetate. SRB grown lithoautotrophically consumed less than 3% of available CO2 and exhibited substantial discrimination, as follows: Desulfobacterium autotrophicum (alpha 1.0100 to 1.0123), Desulfobacter hydrogenophilus (alpha = 0.0138), and Desulfotomuculum acetoxidans (alpha = 1.0310). Mixotrophic growth of Desulfovibrio desulfuricans on acetate and CO2 resulted in biomass with delta C-13 composition intermediate to that of the substrates. We have recently extended these experiments to include the thermophilic SRA Archeoglobus spp. Ecological forces also influence isotopic discrimination. Accordingly, we quantified the flow of C and other constituents in modern marine cyanobacterial mats, whose ancestry extends back billions of years. Such ecosystem processes shaped the biosignatures that entered sediments and atmospheres. At Guerrero Negro, BCS, Mexico, we examined mats dominated by Microcoleus (subtidal) and Lyngbya (intertidal to supratidal) cyanobacteria. During 24 hour cycles, we observed the exchange of O2 and dissolved inorganic C (DIC) between mats and the overlying water. Microcoleus mats assimilated near-equal amounts of DIC during the day as they released at night, but Lyngbya mats typically showed net uptake of DIC over the diel cycle. Patterns of O2 daytime release and nighttime uptake mirrored these DIC trends in both mat types. Nighttime DIC effluxes from Microcoleus mats were equivalent in the presence versus absence of O2, whereas nighttime DIC effluxes from Lyngbya mats dropped markedly in the absence of O2. Thus aerobic diagenesis was more important in Lyngbya mats than in Microcoleus mats, perhaps because trapped O2 bubbles persist only in Lyngbya mats at night and thus sustain populations of aerbes. In both mat types, effluxes of H2, CH4 and short-chain fatty acids were much greater at night in the absence of 02, emphasizing the importance of fermentation. Differences observed between Microcoleus versus Lyngbya mats forecast differences in their microbial populations and in their patterns of gene expression.

Polyamines Interact with Hydroxyl Radicals in Activating Ca2+ and K+ Transport across the Root Epidermal Plasma Membranes1[W

PubMed Central

Zepeda-Jazo, Isaac; Velarde-Buendía, Ana María; Enríquez-Figueroa, René; Bose, Jayakumar; Shabala, Sergey; Muñiz-Murguía, Jesús; Pottosin, Igor I.

2011-01-01

Reactive oxygen species (ROS) are integral components of the plant adaptive responses to environment. Importantly, ROS affect the intracellular Ca2+ dynamics by activating a range of nonselective Ca2+-permeable channels in plasma membrane (PM). Using patch-clamp and noninvasive microelectrode ion flux measuring techniques, we have characterized ionic currents and net K+ and Ca2+ fluxes induced by hydroxyl radicals (OH•) in pea (Pisum sativum) roots. OH•, but not hydrogen peroxide, activated a rapid Ca2+ efflux and a more slowly developing net Ca2+ influx concurrent with a net K+ efflux. In isolated protoplasts, OH• evoked a nonselective current, with a time course and a steady-state magnitude similar to those for a K+ efflux in intact roots. This current displayed a low ionic selectivity and was permeable to Ca2+. Active OH•-induced Ca2+ efflux in roots was suppressed by the PM Ca2+ pump inhibitors eosine yellow and erythrosine B. The cation channel blockers gadolinium, nifedipine, and verapamil and the anionic channel blockers 5-nitro-2(3-phenylpropylamino)-benzoate and niflumate inhibited OH•-induced ionic currents in root protoplasts and K+ efflux and Ca2+ influx in roots. Contrary to expectations, polyamines (PAs) did not inhibit the OH•-induced cation fluxes. The net OH•-induced Ca2+ efflux was largely prolonged in the presence of spermine, and all PAs tested (spermine, spermidine, and putrescine) accelerated and augmented the OH•-induced net K+ efflux from roots. The latter effect was also observed in patch-clamp experiments on root protoplasts. We conclude that PAs interact with ROS to alter intracellular Ca2+ homeostasis by modulating both Ca2+ influx and efflux transport systems at the root cell PM. PMID:21980172

Soil microbial metabolic quotient (qCO2) of twelve ecosystems of Mt. Kilimanjaro

NASA Astrophysics Data System (ADS)

Pabst, Holger; Gerschlauer, Friederike; Kiese, Ralf; Kuzyakov, Yakov

2014-05-01

Soil organic carbon, microbial biomass carbon (MBC) and the metabolic quotient qCO2 - as sensitive and important parameters for soil fertility and C turnover - are strongly affected by land-use changes all over the world. These effects are particularly distinct upon conversion of natural to agricultural ecosystems due to very fast carbon (C) and nutrient cycles and high vulnerability, especially in the tropics. In this study, we used an elevational gradient on Mt. Kilimanjaro to investigate the effects of land-use change and elevation on Corg, MBC and qCO2. Down to a soil depth of 18 cm we compared 4 natural (Helichrysum, Erica forest, Podocarpus forest, Ocotea forest), 5 seminatural (disturbed Podocarpus forest, disturbed Ocotea forest, lower montane forest, grassland, savannah), 1 sustainably used (homegarden) and 2 intensively used ecosystems (coffee plantation, maize field) on an elevation gradient from 950 to 3880 m a.s.l.. Using an incubation device, soil CO2-efflux of 18 cm deep soil cores was measured under field moist conditions and mean annual temperature. MBC to Corg ratios varied between 0.7 and 2.3%. qCO2 increased with magnitude of the disturbance, albeit this effect decreased with elevation. Following the annual precipitation of the ecosystems, both, Corg and MBC showed a hum-shaped distribution with elevation, whereas their maxima were between 2500 and 3000 m a.s.l.. Additionaly, Corg and MBC contents were significantly reduced in intensively used agricultural systems. We conclude that the soil microbial biomass and its activity in Mt. Kilimanjaro ecosystems are strongly altered by land-use. This effect is more distinct in lower than in higher elevated ecosystems and strongly dependent on the magnitude of disturbance.

Effects of a holiday week on urban soil CO2 flux: an intensive study in Xiamen, southeastern China

NASA Astrophysics Data System (ADS)

Ye, H.; Wang, K.; Chen, F.

2012-12-01

To study the effects of a holiday period on urban soil CO2 flux, CO2 efflux from grassland soil in a traditional park in the city of Xiamen was measured hourly from 28th Sep to 11th Oct, a period that included China's National Day holiday week in 2009. The results of this study revealed that: a) The urban soil CO2 emissions were higher before and after the holiday week and lower during the National Day holiday reflecting changes in the traffic cycles; b) A diurnal cycle where the soil CO2 flux decreased from early morning to noon was associated with CO2 uptake by vegetation which strongly offset vehicle CO2 emissions. The soil CO2 flux increased from night to early morning, associated with reduced CO2 uptake by vegetation; c) During the National Day holiday week in 2009, lower rates of soil respiration were measured after Mid-Autumn Day than earlier in the week, and this was related to a reduced level of human activities and vehicle traffic, reducing the CO2 concentration in the air. Urban holidays have a clear effect on soil CO2 flux through the interactions between vehicle, visitor and vegetation CO2 emissions which indirectly control the use of carbon by plant roots, the rhizosphere and soil microorganisms. Consequently, appropriate traffic controls and tourism travel plans can have positive effects on the soil carbon store and may improve local air quality.

Biorelevant media resistant co-culture model mimicking permeability of human intestine.

PubMed

Antoine, Delphine; Pellequer, Yann; Tempesta, Camille; Lorscheidt, Stefan; Kettel, Bernadette; Tamaddon, Lana; Jannin, Vincent; Demarne, Frédéric; Lamprecht, Alf; Béduneau, Arnaud

2015-03-15

Cell culture models are currently used to predict absorption pattern of new compounds and formulations in the human gastro-intestinal tract (GIT). One major drawback is the lack of relevant apical incubation fluids allowing mimicking luminal conditions in the GIT. Here, we suggest a culture model compatible with biorelevant media, namely Fasted State Simulated Intestinal Fluid (FaSSIF) and Fed State Simulated Intestinal Fluid (FeSSIF). Co-culture was set up from Caco-2 and mucus-secreting HT29-MTX cells using an original seeding procedure. Viability and cytotoxicity assays were performed following incubation of FeSSIF and FaSSIF with co-culture. Influence of biorelevant fluids on paracellular permeability or transporter proteins were also evaluated. Results were compared with Caco-2 and HT29-MTX monocultures. While Caco-2 viability was strongly affected with FeSSIF, no toxic effect was detected for the co-cultures in terms of viability and lactate dehydrogenase release. The addition of FeSSIF to the basolateral compartment of the co-culture induced cytotoxic effects which suggested the apical mucus barrier being cell protective. In contrast to FeSSIF, FaSSIF induced a slight increase of the paracellular transport and both tested media inhibited partially the P-gp-mediated efflux in the co-culture. Additionally, the absorptive transport of propranolol hydrochloride, a lipophilic β-blocker, was strongly affected by biorelevant fluids. This study demonstrated the compatibility of the Caco-2/HT29-MTX model with some of the current biorelevant media. Combining biorelevant intestinal fluids with features such as mucus secretion, adjustable paracellular and P-gp mediated transports, is a step forward to more realistic in-vitro models of the human intestine. Copyright © 2015. Published by Elsevier B.V.

Monitoring diffuse degassing in monogentic volcanic field during a quiescent period: the case of Cumbre Vieja (La Palma,Canary Islands, Spain)

NASA Astrophysics Data System (ADS)

Burns, F.; Cole, M.; Vaccaro, W.; Alonso Cótchico, M.; Melián, G.; Asensio-Ramos, M.; Padron, E.; Hernandez Perez, P. A.; Perez, N. M.

2017-12-01

Volcanic activity at La Palma (Canary Islands) in the last 123 ka has taken place exclusively at the southern part of the island, where Cumbre Vieja volcano, which is characterized by a main north-south rift zone 20 km long and up to 1950 m in elevation and covering an area of 220 km2 with vents located also at the northwest and northeast. Cumbre Vieja is the most active basaltic volcano in the Canaries with 7 historical eruptions being San Juan (1949) and Teneguía (1971) the most recent ones. Since no visible degassing (fumaroles, etc.) at Cumbre Vieja occurs, our geochemical program for the volcanic surveillance of Cumbre Vieja is mainly focused on diffuse degassing monitoring. Diffuse CO2 emission surveys are yearly performed in summer to minimize the influence of meteorological variations. About 570 sampling sites were selected for each survey to obtain a homogeneous distribution after taking into consideration the local geology, structure, and accessibility. Measurements of soil CO2 efflux were performed in situ by means of a portable non-dispersive infrared sensor following the accumulation chamber method. The soil CO2 efflux values of the 2017 survey ranged from non-detectable to 47.7 g m-2 d-1. Statistical-graphical analysis of the data show two different geocheleemical populations; background (B) and peak (P) represented by 98.2% and 1.8% of the total data, respectively. The geometric means of the B and P populations are 2.9 and 36.5 g m-2 d-1, respectively. Most of the area showed B values while the P values were mainly observed both flanks of the main N-S volcanic rift. To estimate the diffuse CO2 emission in metric tons per day released from Cumbre Vieja (220 km2) for the 2017 survey, we ran about 100 sGs simulations. The estimated 2017 diffuse CO2 output released to atmosphere by Cumbre Vieja was at 801 ± 27 t d-1, value relatively higher than the background average of CO2 emission estimated on 374 t d-1 and within the background range of 132 t d-1 (-1σ) and 1.254 t d-1 (+1σ) observed at Cumbre Vieja volcano during the period 2001-2013 (Padrón et al., 2015. Bull. Volcanol. 77:28). Monitoring the diffuse CO2 emission contributes to detect early warning signals of volcanic unrest at Cumbre Vieja volcano.

Effect of two lipid-lowering strategies on high-density lipoprotein function and some HDL-related proteins: a randomized clinical trial.

PubMed

Lee, Chan Joo; Choi, Seungbum; Cheon, Dong Huey; Kim, Kyeong Yeon; Cheon, Eun Jeong; Ann, Soo-Jin; Noh, Hye-Min; Park, Sungha; Kang, Seok-Min; Choi, Donghoon; Lee, Ji Eun; Lee, Sang-Hak

2017-02-28

The influence of lipid-lowering therapy on high-density lipoprotein (HDL) is incompletely understood. We compared the effect of two lipid-lowering strategies on HDL functions and identified some HDL-related proteins. Thirty two patients were initially screened and HDLs of 21 patients were finally analyzed. Patients were randomized to receive atorvastatin 20 mg (n = 11) or atorvastatin 5 mg/ezetimibe 10 mg combination (n = 10) for 8 weeks. The cholesterol efflux capacity and other anti-inflammatory functions were assessed based on HDLs of the participants before and after treatment. Pre-specified HDL proteins of the same HDL samples were measured. The post-treatment increase in cholesterol efflux capacities was similar between the groups (35.6% and 34.6% for mono-therapy and combination, respectively, p = 0.60). Changes in nitric oxide (NO) production, vascular cell adhesion molecule-1 (VCAM-1) expression, and reactive oxygen species (ROS) production were similar between the groups. The baseline cholesterol efflux capacity correlated positively with apolipoprotein (apo)A1 and C3, whereas apoA1 and apoC1 showed inverse associations with VCAM-1 expression. The changes in the cholesterol efflux capacity were positively correlated with multiple HDL proteins, especially apoA2. Two regimens increased the cholesterol efflux capacity of HDL comparably. Multiple HDL proteins, not limited to apoA1, showed a correlation with HDL functions. These results indicate that conventional lipid therapy may have additional effects on HDL functions with changes in HDL proteins. ClinicalTrials.gov, number NCT02942602 .

Cholesterol Efflux Capacity, High-Density Lipoprotein Particle Number, and Incident Cardiovascular Events: An Analysis From the JUPITER Trial (Justification for the Use of Statins in Prevention: An Intervention Trial Evaluating Rosuvastatin).

PubMed

Khera, Amit V; Demler, Olga V; Adelman, Steven J; Collins, Heidi L; Glynn, Robert J; Ridker, Paul M; Rader, Daniel J; Mora, Samia

2017-06-20

Recent failures of drugs that raised high-density lipoprotein (HDL) cholesterol levels to reduce cardiovascular events in clinical trials have led to increased interest in alternative indices of HDL quality, such as cholesterol efflux capacity, and HDL quantity, such as HDL particle number. However, no studies have directly compared these metrics in a contemporary population that includes potent statin therapy and low low-density lipoprotein cholesterol. HDL cholesterol levels, apolipoprotein A-I, cholesterol efflux capacity, and HDL particle number were assessed at baseline and 12 months in a nested case-control study of the JUPITER trial (Justification for the Use of Statins in Prevention: An Intervention Trial Evaluating Rosuvastatin), a randomized primary prevention trial that compared rosuvastatin treatment to placebo in individuals with normal low-density lipoprotein cholesterol but increased C-reactive protein levels. In total, 314 cases of incident cardiovascular disease (CVD) (myocardial infarction, unstable angina, arterial revascularization, stroke, or cardiovascular death) were compared to age- and gender-matched controls. Conditional logistic regression models adjusting for risk factors evaluated associations between HDL-related biomarkers and incident CVD. Cholesterol efflux capacity was moderately correlated with HDL cholesterol, apolipoprotein A-I, and HDL particle number (Spearman r = 0.39, 0.48, and 0.39 respectively; P <0.001). Baseline HDL particle number was inversely associated with incident CVD (adjusted odds ratio per SD increment [OR/SD], 0.69; 95% confidence interval [CI], 0.56-0.86; P <0.001), whereas no significant association was found for baseline cholesterol efflux capacity (OR/SD, 0.89; 95% CI, 0.72-1.10; P =0.28), HDL cholesterol (OR/SD, 0.82; 95% CI, 0.66-1.02; P =0.08), or apolipoprotein A-I (OR/SD, 0.83; 95% CI, 0.67-1.03; P =0.08). Twelve months of rosuvastatin (20 mg/day) did not change cholesterol efflux capacity (average percentage change -1.5%, 95% CI, -13.3 to +10.2; P =0.80), but increased HDL cholesterol (+7.7%), apolipoprotein A-I (+4.3%), and HDL particle number (+5.2%). On-statin cholesterol efflux capacity was inversely associated with incident CVD (OR/SD, 0.62; 95% CI, 0.42-0.92; P =0.02), although HDL particle number again emerged as the strongest predictor (OR/SD, 0.51; 95% CI, 0.33-0.77; P <0.001). In JUPITER, cholesterol efflux capacity was associated with incident CVD in individuals on potent statin therapy but not at baseline. For both baseline and on-statin analyses, HDL particle number was the strongest of 4 HDL-related biomarkers as an inverse predictor of incident events and biomarker of residual risk. URL: http://www.clinicaltrials.gov. Unique identifier: NCT00239681. © 2017 American Heart Association, Inc.

5-HT has contrasting effects in the frontal cortex, but not the hypothalamus, on changes in noradrenaline efflux induced by the monoamine releasing-agent, d-amphetamine, and the reuptake inhibitor, BTS 54 354.

PubMed

Géranton, Sandrine M; Heal, David J; Stanford, S Clare

2004-03-01

There is extensive evidence for functional interactions between central noradrenergic and serotonergic neurones. Here, dual-probe microdialysis was used in freely-moving rats to compare the effects of 5-HT on noradrenergic transmission in the rat frontal cortex and hypothalamus. We studied the effects of the 5-HT synthesis inhibitor, para-chlorophenylalanine (pCPA; which depleted 5-HT stores in both the frontal cortex and the hypothalamus), on spontaneous efflux of noradrenaline and on the noradrenergic responses to d-amphetamine, and the monoamine reuptake inhibitor, BTS 54 354. pCPA pretreatment alone did not affect spontaneous noradrenaline efflux in either brain region, whether or not alpha2-autoreceptors were inactivated by administration of the alpha2-antagonist, atipamezole (1 mg/kg i.p). However, in the frontal cortex, pCPA pretreatment augmented the amplitude of, and prolonged, the noradrenergic response to local infusion of d-amphetamine (10 microM). In contrast, pCPA abolished the increase in cortical noradrenaline efflux induced by local infusion of BTS 54 354 (50 microM). In the hypothalamus, pCPA did not affect the amplitude of the response to either of these agents but did prolong the effects of d-amphetamine on noradrenaline efflux. These findings suggest that serotonergic transmission has complex effects on the noradrenergic response to drugs that increase noradrenergic transmission in the frontal cortex, but has less influence in the hypothalamus.

Antibacterial and efflux pump inhibitors of thymol and carvacrol against food-borne pathogens.

PubMed

Miladi, Hanene; Zmantar, Tarek; Chaabouni, Yassine; Fedhila, Kais; Bakhrouf, Amina; Mahdouani, Kacem; Chaieb, Kamel

2016-10-01

In this study thymol (THY) and carvacrol (CAR), two monoterpenic phenol produced by various aromatic plants, was tested for their antibacterial and efflux pump inhibitors potencies against a panel of clinical and foodborne pathogenes. Our results demonstrated a substantial susceptibility of the tested bacteria toward THY and CAR. Especially, THY displayed a strong inhibitory activity (MIC's values ranged from 32 to 64 μg/mL) against the majority of the tested strains compared to CAR. Moreover, a significant reduction in MIC's of TET and benzalkonium chloride (QAC) were noticed when tested in combinations with THY and CAR. Their synergic effect was more significant in the case of THY which resulted a reduction of MIC's values of TET (2-8 fold) and QAC (2-8 fold). We noted also that THY and CAR inhibited the ethidium bromide (EtBr) cell efflux in a concentration-dependent manner. The rate of EtBr accumulation in food-borne pathogen was enhanced with THY and CAR (0, 250 and 500 μg/mL). The lowest concentration causing 50% of EtBr efflux inhibition (IC 50) was noticed in Salmonella enteritidis (1129) at 150 μg/mL of THY and 190 μg/mL of CAR respectively. These findings indicate that THY and CAR may serve as potential sources of efflux pump inhibitor in food-borne pathogens. Copyright © 2016 Elsevier Ltd. All rights reserved.

Soil matrix tracer contamination and canopy recycling did not impair ¹³CO₂ plant-soil pulse labelling experiments.

PubMed

Barthel, Matthias; Sturm, Patrick; Knohl, Alexander

2011-09-01

When conducting (13)CO(2) plant-soil pulse labelling experiments, tracer material might cause unwanted side effects which potentially affect δ(13)C measurements of soil respiration (δ(13)C(SR)) and the subsequent data interpretation. First, when the soil matrix is not isolated from the atmosphere, contamination of the soil matrix with tracer material occurs leading to a physical back-diffusion from soil pores. Second, when using canopy chambers continuously, (13)CO(2) is permanently re-introduced into the atmosphere due to leaf respiration which then aids re-assimilation of tracer material by the canopy. Accordingly, two climate chamber experiments on European beech saplings (Fagus sylvatica L.) were conducted to evaluate the influence of soil matrix (13)CO(2) contamination and canopy recycling on soil (13)CO(2) efflux during (13)CO(2) plant-soil pulse labelling experiments. For this purpose, a combined soil/canopy chamber system was developed which separates soil and canopy compartments in order to (a) prevent diffusion of (13)C tracer into the soil chamber during a (13)CO(2) canopy pulse labelling and (b) study stable isotope processes in soil and canopy individually and independently. In combination with laser spectrometry measuring CO(2) isotopologue mixing ratios at a rate of 1 Hz, we were able to measure δ(13)C in canopy and soil at very high temporal resolution. For the soil matrix contamination experiment, (13)CO(2) was applied to bare soil, canopy only or, simultaneously, to soil and canopy of the beech trees. The obtained δ(13)C(SR) fluxes from the different treatments were then compared with respect to label re-appearance, first peak time and magnitude. By determining the δ(13)C(SR) decay of physical (13)CO(2) back-diffusion from bare soils (contamination), it was possible to separate biological and physical components in δ(13)C(SR) of a combined flux of both. A second pulse labelling experiment, with chambers permanently enclosing the canopy, revealed that (13)CO(2) recycling at canopy level had no effect on δ(13)C(SR) dynamics.

Linking seafloor volcanism to rising carbon dioxide after the last ice age: observations from the Gulf of California

NASA Astrophysics Data System (ADS)

Rafter, P. A.; Herguera, J. C.; Carriquiry, J. D.; Solomon, E. A.; Southon, J. R.

2017-12-01

Seafloor volcanism at ocean spreading centers may have played an important role in late Pleistocene glacial terminations by increasing the global inventory of the greenhouse gas carbon dioxide (CO2). Gulf of California geology and hydrography offer a unique opportunity to quantify this carbon contribution because CO2 from local seafloor volcanism will reduce/reverse the vertical gradient of seawater radiocarbon (14C). We reconstructed this surface-to-deep gradient by measuring the 14C content of seafloor- and surface-dwelling foraminifera and find several surface-deep 14C reversals during the most recent deglaciation—a 14C distribution that has no analog in the modern ocean. We interpret these observations as representing increased CO2 efflux from the seafloor during deglaciation, linking plate tectonics with the carbon cycle and global climate via enhanced seafloor volcanism.

A quantum cascade laser infrared spectrometer for CO2 stable isotope analysis: Field implementation at a hydrocarbon contaminated site under bio-remediation.

PubMed

Guimbaud, Christophe; Noel, Cécile; Chartier, Michel; Catoire, Valéry; Blessing, Michaela; Gourry, Jean Christophe; Robert, Claude

2016-02-01

Real-time methods to monitor stable isotope ratios of CO2 are needed to identify biogeochemical origins of CO2 emissions from the soil-air interface. An isotope ratio infra-red spectrometer (IRIS) has been developed to measure CO2 mixing ratio with δ(13)C isotopic signature, in addition to mixing ratios of other greenhouse gases (CH4, N2O). The original aspects of the instrument as well as its precision and accuracy for the determination of the isotopic signature δ(13)C of CO2 are discussed. A first application to biodegradation of hydrocarbons is presented, tested on a hydrocarbon contaminated site under aerobic bio-treatment. CO2 flux measurements using closed chamber method is combined with the determination of the isotopic signature δ(13)C of the CO2 emission to propose a non-intrusive method to monitor in situ biodegradation of hydrocarbons. In the contaminated area, high CO2 emissions have been measured with an isotopic signature δ(13)C suggesting that CO2 comes from petroleum hydrocarbon biodegradation. This first field implementation shows that rapid and accurate measurement of isotopic signature of CO2 emissions is particularly useful in assessing the contribution of contaminant degradation to the measured CO2 efflux and is promising as a monitoring tool for aerobic bio-treatment. Copyright © 2016. Published by Elsevier B.V.

A dual isotope approach to isolate soil carbon pools of different turnover times

DOE PAGES

Torn, M. S.; Kleber, M.; Zavaleta, E. S.; ...

2013-12-10

Soils are globally significant sources and sinks of atmospheric CO 2. Increasing the resolution of soil carbon turnover estimates is important for predicting the response of soil carbon cycling to environmental change. We show that soil carbon turnover times can be more finely resolved using a dual isotope label like the one provided by elevated CO 2 experiments that use fossil CO 2. We modeled each soil physical fraction as two pools with different turnover times using the atmospheric 14C bomb spike in combination with the label in 14C and 13C provided by an elevated CO 2 experiment in amore » California annual grassland. In sandstone and serpentine soils, the light fraction carbon was 21–54% fast cycling with 2–9 yr turnover, and 36–79% slow cycling with turnover slower than 100 yr. This validates model treatment of the light fraction as active and intermediate cycling carbon. The dense, mineral-associated fraction also had a very dynamic component, consisting of ~7% fast-cycling carbon and ~93% very slow cycling carbon. Similarly, half the microbial biomass carbon in the sandstone soil was more than 5 yr old, and 40% of the carbon respired by microbes had been fixed more than 5 yr ago. Resolving each density fraction into two pools revealed that only a small component of total soil carbon is responsible for most CO 2 efflux from these soils. In the sandstone soil, 11% of soil carbon contributes more than 90% of the annual CO 2 efflux. The fact that soil physical fractions, designed to isolate organic material of roughly homogeneous physico-chemical state, contain material of dramatically different turnover times is consistent with recent observations of rapid isotope incorporation into seemingly stable fractions and with emerging evidence for hot spots or micro-site variation of decomposition within the soil matrix. Predictions of soil carbon storage using a turnover time estimated with the assumption of a single pool per density fraction would greatly overestimate the near-term response to changes in productivity or decomposition rates. Therefore, these results suggest a slower initial change in soil carbon storage due to environmental change than has been assumed by simpler (one-pool) mass balance calculations.« less

Evaluation of a series of 2-napthamide derivatives as inhibitors of the drug efflux pump AcrB for the reversal of antimicrobial resistance.

PubMed

Wang, Yinhu; Mowla, Rumana; Guo, Liwei; Ogunniyi, Abiodun D; Rahman, Taufiq; De Barros Lopes, Miguel A; Ma, Shutao; Venter, Henrietta

2017-02-15

Drug efflux pumps confer multidrug resistance to dangerous pathogens which makes these pumps important drug targets. We have synthesised a novel series of compounds based on a 2-naphthamide pharmacore aimed at inhibiting the efflux pumps from Gram-negative bacteria. The archeatypical transporter AcrB from Escherichia coli was used as model efflux pump as AcrB is widely conserved throughout Gram-negative organisms. The compounds were tested for their antibacterial action, ability to potentiate the action of antibiotics and for their ability to inhibit Nile Red efflux by AcrB. None of the compounds were antimicrobial against E. coli wild type cells. Most of the compounds were able to inhibit Nile Red efflux indicating that they are substrates of the AcrB efflux pump. Three compounds were able to synergise with antibiotics and reverse resistance in the resistant phenotype. Compound A3, 4-(isopentyloxy)-2-naphthamide, reduced the MICs of erythromycin and chloramphenicol to the MIC levels of the drug sensitive strain that lacks an efflux pump. A3 had no effect on the MIC of the non-substrate rifampicin indicating that this compound acts specifically through the AcrB efflux pump. A3 also does not act through non-specific mechanisms such as outer membrane or inner membrane permeabilisation and is not cytotoxic against mammalian cell lines. Therefore, we have designed and synthesised a novel chemical compound with great potential to further optimisation as inhibitor of drug efflux pumps. Copyright © 2017 Elsevier Ltd. All rights reserved.

Hydrogen peroxide inhibits iodide influx and enhances iodide efflux in cultured FRTL-5 rat thyroid cells.

PubMed

Sugawara, M; Yamaguchi, D T; Lee, H Y; Yanagisawa, K; Murakami, S; Summer, C N; Johnson, D G; Levin, S R

1990-05-01

This study describes the effects of hydrogen peroxide on the two iodide transport systems, I influx and I efflux, in the cultured FRTL-5 rat thyroid cells. I influx was measured by the amount of I taken up by the cells during incubation with Na125I and NaI for 7 min, and I efflux was measured by calculating the rate of 125I release from the 125I-loaded cells in the presence and absence of 5 mmol/l H2O2. Exposure to greater than 100 mumol/l H2O2 for 40 min caused a significant inhibition of I influx; the inhibition was reversible and non-competitive with iodide. Thyroid Na+K+ ATPase activity, a major mechanism to drive I influx, decreased by 40% after the cells were exposed to 5 mmol/l H2O2 for 10 min. H2O2 enhanced I efflux only when Ca2+ was present in the medium. The mechanism of an enhanced I efflux by H2O2 appears to be mediated through the elevation of free cytosolic Ca2+ concentration. Our data indicate that H2O2 can affect I transport by inhibiting I influx and enhancing I efflux.

Exploiting Nanotechnology to Overcome Tumor Drug Resistance: Challenges and Opportunities

PubMed Central

Kirtane, Ameya; Kalscheuer, Stephen; Panyam, Jayanth

2013-01-01

Tumor cells develop resistance to chemotherapeutic drugs through multiple mechanisms. Overexpression of efflux transporters is an important source of drug resistance. Efflux transporters such as P-glycoprotein reduce intracellular drug accumulation and compromise drug efficacy. Various nanoparticle-based approaches have been investigated to overcome efflux-mediated resistance. These include the use of formulation excipients that inhibit transporter activity and co-delivery of the anticancer drug with a specific inhibitor of transporter function or expression. However, the effectiveness of nanoparticles can be diminished by poor transport in the tumor tissue. Hence, adjunct therapies that improve the intratumoral distribution of nanoparticles may be vital to the successful application of nanotechnology to overcome tumor drug resistance. This review discusses the mechanisms of tumor drug resistance and highlights the opportunities and challenges in the use of nanoparticles to improve the efficacy of anticancer drugs against resistant tumors. PMID:24036273

Mitochondrial Ca2+ influx and efflux rates in guinea pig cardiac mitochondria: low and high affinity effects of cyclosporine A.

PubMed

Wei, An-Chi; Liu, Ting; Cortassa, Sonia; Winslow, Raimond L; O'Rourke, Brian

2011-07-01

Ca(2+) plays a central role in energy supply and demand matching in cardiomyocytes by transmitting changes in excitation-contraction coupling to mitochondrial oxidative phosphorylation. Matrix Ca(2+) is controlled primarily by the mitochondrial Ca(2+) uniporter and the mitochondrial Na(+)/Ca(2+) exchanger, influencing NADH production through Ca(2+)-sensitive dehydrogenases in the Krebs cycle. In addition to the well-accepted role of the Ca(2+)-triggered mitochondrial permeability transition pore in cell death, it has been proposed that the permeability transition pore might also contribute to physiological mitochondrial Ca(2+) release. Here we selectively measure Ca(2+) influx rate through the mitochondrial Ca(2+) uniporter and Ca(2+) efflux rates through Na(+)-dependent and Na(+)-independent pathways in isolated guinea pig heart mitochondria in the presence or absence of inhibitors of mitochondrial Na(+)/Ca(2+) exchanger (CGP 37157) or the permeability transition pore (cyclosporine A). cyclosporine A suppressed the negative bioenergetic consequences (ΔΨ(m) loss, Ca(2+) release, NADH oxidation, swelling) of high extramitochondrial Ca(2+) additions, allowing mitochondria to tolerate total mitochondrial Ca(2+) loads of >400nmol/mg protein. For Ca(2+) pulses up to 15μM, Na(+)-independent Ca(2+) efflux through the permeability transition pore accounted for ~5% of the total Ca(2+) efflux rate compared to that mediated by the mitochondrial Na(+)/Ca(2+) exchanger (in 5mM Na(+)). Unexpectedly, we also observed that cyclosporine A inhibited mitochondrial Na(+)/Ca(2+) exchanger-mediated Ca(2+) efflux at higher concentrations (IC(50)=2μM) than those required to inhibit the permeability transition pore, with a maximal inhibition of ~40% at 10μM cyclosporine A, while having no effect on the mitochondrial Ca(2+) uniporter. The results suggest a possible alternative mechanism by which cyclosporine A could affect mitochondrial Ca(2+) load in cardiomyocytes, potentially explaining the paradoxical toxic effects of cyclosporine A at high concentrations. This article is part of a Special Issue entitled: Mitochondria and Cardioprotection. Copyright © 2011 Elsevier B.V. All rights reserved.

Alpha-tocopheryl polyethylene glycol succinate-emulsified poly(lactic-co-glycolic acid) nanoparticles for reversal of multidrug resistance in vitro

NASA Astrophysics Data System (ADS)

Wang, Ying; Guo, Miao; Lu, Yu; Ding, Li-Ying; Ron, Wen-Ting; Liu, Ya-Qing; Song, Fei-Fei; Yu, Shu-Qin

2012-12-01

Multidrug resistance (MDR) is one of the factors in the failure of anticancer chemotherapy. In order to enhance the anticancer effect of P-glycoprotein (P-gp) substrates, inhibition of the P-gp efflux pump on MDR cells is a good tactic. We designed novel multifunctional drug-loaded alpha-tocopheryl polyethylene glycol succinate (TPGS)/poly(lactic-co-glycolic acid) (PLGA) nanoparticles (TPGS/PLGA/SN-38 NPs; SN-38 is 7-ethyl-10-hydroxy-camptothecin), with TPGS-emulsified PLGA NPs as the carrier and modulator of the P-gp efflux pump and SN-38 as the model drug. TPGS/PLGA/SN-38 NPs were prepared using a modified solvent extraction/evaporation method. Physicochemical characterizations of TPGS/PLGA/SN-38 NPs were in conformity with the principle of nano-drug delivery systems (nDDSs), including a diameter of about 200 nm, excellent spherical particles with a smooth surface, narrow size distribution, appropriate surface charge, and successful drug-loading into the NPs. The cytotoxicity of TPGS/PLGA/SN-38 NPs to MDR cells was increased by 3.56 times compared with that of free SN-38. Based on an intracellular accumulation study relative to the time-dependent uptake and efflux inhibition, we suggest novel mechanisms of MDR reversal of TPGS/PLGA NPs. Firstly, TPGS/PLGA/SN-38 NPs improved the uptake of the loaded drug by clathrin-mediated endocytosis in the form of unbroken NPs. Simultaneously, intracellular NPs escaped the recognition of P-gp by MDR cells. After SN-38 was released from TPGS/PLGA/SN-38 NPs in MDR cells, TPGS or/and PLGA may modulate the efflux microenvironment of the P-gp pump, such as mitochondria and the P-gp domain with an ATP-binding site. Finally, the controlled-release drug entered the nucleus of the MDR cell to induce cytotoxicity. The present study showed that TPGS-emulsified PLGA NPs could be functional carriers in nDDS for anticancer drugs that are also P-gp substrates. More importantly, to enhance the therapeutic effect of P-gp substrates, this work might provide a new insight into the design of pharmacologically inactive excipients that can serve as P-gp modulators instead of drugs that are P-gp inhibitors.

Ibogaine labeling with 99mTc-tricarbonyl: synthesis and transport at the mouse blood-brain barrier.

PubMed

Tournier, Nicolas; André, Pascal; Blondeel, Sandy; Rizzo-Padoin, Nathalie; du Moulinet d'Hardemarre, Amaury; Declèves, Xavier; Scherrmann, Jean-Michel; Cisternino, Salvatore

2009-12-01

The (99m)Tc-tricarbonyl core may be used as an ideal tool for gamma-labeling ligands in noninvasive SPECT imaging. However, most (99m)Tc-tricarbonyl-labeled agents have difficulty crossing the blood-brain barrier (BBB). We radiolabeled the neuroactive indole ibogaine with (99m)Tc-tricarbonyl and measured its transport into the mouse brain by in situ brain perfusion. We measured the interactions of [(99m)Tc(CO)(3)-ibogaine](+) and (99m)Tc-tricarbonyl with the main BBB efflux transporters P-gp and BCRP in vitro and in vivo. Ibogaine was radiolabeled (yield: over 95%). [(99m)Tc(CO)(3)-ibogaine](+) entered the brain (K(in)) poorly (0.18 microL/g/s), at about the same rate as (99m)Tc-tricarbonyl (0.16 microL/g/s) and [(99m)Tc-sestamibi](+) (0.10 microL/g/s). The CNS tracer [(99m)Tc-HMPAO](0) entered the brain approximately 70-times higher than [(99m)Tc(CO)(3)-ibogaine](+). In vitro studies revealed that neither [(99m)Tc(CO)(3)-ibogaine](+) nor (99m)Tc-tricarbonyl ion were substrates for P-gp or BCRP. But lowering the membrane dipole potential barrier with phloretin enhanced the brain transport of [(99m)Tc(OH(2))(3)(CO)(3)](+) approximately 3-fold. Thus, ibogaine directly labeled with (99m)Tc-tricarbonyl is not suitable for CNS imaging because of its poor uptake. Brain transport is not restricted by efflux transporters but is reduced by its lipophilicity and interaction with the membrane-positive dipole potential. 2009 Wiley-Liss, Inc. and the American Pharmacists Association

/sup 45/Ca efflux for myometrial cells: comparison of the effects of prostaglandin F/sub 2/. cap alpha. (PGF/sub 2/), oxytocin (OT) and arachidonate (A)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Katona, G.; Molnar, M.; Toth, M.

1986-03-01

The aim of this study was to measure PGF/sub 2..cap alpha../-induced Ca/sup 2 +/ release from uterine cells and to compare this to the actions of OT and A. Smooth muscle cells isolated from the uterus (shell gland) of laying hens were cultured for 7 days in M199 plus 10% fetal calf serum. The cells were treated with digitonin (20..mu..M) and preloaded with /sup 45/Ca for 40 min. Addition of PGF/sub 2..cap alpha../ caused a biphasic /sup 45/Ca-efflux. There was a small but significant /sup 45/Ca-release within 30 sec (rapid phase) followed by a larger one within 7 min (slowmore » phase). In comparison, both OT and A stimulated /sup 45/Ca efflux during a single, slow phase. The maximal effect of A was observed at < 7 min, whereas that of OT was slower, peaking after 7 min. Mepacrin, an inhibitor of A release, attenuated the action of OT without having any effect on A promoted /sup 45/Ca-efflux. Indomethacin, an inhibitor of PG synthase, failed to suppress the Ca-releasing effect of A suggesting the A itself or a lipoxygenase product may have been responsible for the observed effects. Moreover, these results provide suggestive evidence that A release is an important step in the action of various uterotonic agents converging on the mobilization of intracellular Ca.« less

Inclusion of Almonds in a Cholesterol-Lowering Diet Improves Plasma HDL Subspecies and Cholesterol Efflux to Serum in Normal-Weight Individuals with Elevated LDL Cholesterol.

PubMed

Berryman, Claire E; Fleming, Jennifer A; Kris-Etherton, Penny M

2017-08-01

Background : Almonds may increase circulating HDL cholesterol when substituted for a high-carbohydrate snack in an isocaloric diet, yet little is known about the effects on HDL biology and function. Objective: The objective was to determine whether incorporating 43 g almonds/d in a cholesterol-lowering diet would improve HDL subspecies and function, which were secondary study outcomes. Methods: In a randomized, 2-period, crossover, controlled-feeding study, a diet with 43 g almonds/d (percentage of total energy: 51% carbohydrate, 16% protein, and 32% total and 8% saturated fat) was compared with a similar diet with an isocaloric muffin substitution (58% carbohydrate, 15% protein, and 26% total and 8% saturated fat) in men and women with elevated LDL cholesterol. Plasma HDL subspecies and cholesterol efflux from J774 macrophages to human serum were measured at baseline and after each diet period. Diet effects were examined in all participants ( n = 48) and in normal-weight (body mass index: <25; n = 14) and overweight or obese (≥25; n = 34) participants by using linear mixed models. Results: The almond diet, compared with the control diet, increased α-1 HDL [mean ± SEM: 26.7 ± 1.5 compared with 24.3 ± 1.3 mg apolipoprotein A-I (apoA-I)/dL; P = 0.001]. In normal-weight participants, the almond diet, relative to the control diet, increased α-1 HDL (33.7 ± 3.2 compared with 28.4 ± 2.6 mg apoA-I/dL), the α-1 to pre-β-1 ratio [geometric mean (95% CI): 4.3 (3.3, 5.7) compared with 3.1 (2.4, 4.0)], and non-ATP-binding cassette transporter A1 cholesterol efflux (8.3% ± 0.4% compared with 7.8% ± 0.3%) and decreased pre-β-2 (3.8 ± 0.4 compared with 4.6 ± 0.4 mg apoA-I/dL) and α-3 (23.5 ± 0.9 compared with 26.9 ± 1.1 mg apoA-I/dL) HDL ( P < 0.05). No diet effects were observed in the overweight or obese group. Conclusions: Substituting almonds for a carbohydrate-rich snack within a lower-saturated-fat diet may be a simple strategy to maintain a favorable circulating HDL subpopulation distribution and improve cholesterol efflux in normal-weight individuals with elevated LDL cholesterol. This trial was registered at clinicaltrials.gov as NCT01101230. © 2017 American Society for Nutrition.

Chloroplast ATP Synthase Modulation of the Thylakoid Proton Motive Force: Implications for Photosystem I and Photosystem II Photoprotection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kanazawa, Atsuko; Ostendorf, Elisabeth; Kohzuma, Kaori

In wild type plants, decreasing CO 2 lowers the activity of the chloroplast ATP synthase, slowing proton efflux from the thylakoid lumen resulting in buildup of thylakoid proton motive force (pmf). The resulting acidification of the lumen regulates both light harvesting, via the qE mechanism, and photosynthetic electron transfer through the cytochrome b 6f complex. Here in this paper, we show that the cfq mutant of Arabidopsis, harboring single point mutation in its γ-subunit of the chloroplast ATP synthase, increases the specific activity of the ATP synthase and disables its down-regulation under low CO 2. The increased thylakoid proton conductivitymore » (g H +) in cfq results in decreased pmf and lumen acidification, preventing full activation of qE and more rapid electron transfer through the b6f complex, particularly under low CO 2 and fluctuating light. These conditions favor the accumulation of electrons on the acceptor side of PSI, and result in severe loss of PSI activity. Comparing the current results with previous work on the pgr5 mutant suggests a general mechanism where increased PSI photodamage in both mutants is caused by loss of pmf, rather than inhibition of CEF per se. Overall, our results support a critical role for ATP synthase regulation in maintaining photosynthetic control of electron transfer to prevent photodamage.« less

Chloroplast ATP Synthase Modulation of the Thylakoid Proton Motive Force: Implications for Photosystem I and Photosystem II Photoprotection

DOE PAGES

Kanazawa, Atsuko; Ostendorf, Elisabeth; Kohzuma, Kaori; ...

2017-05-03

In wild type plants, decreasing CO 2 lowers the activity of the chloroplast ATP synthase, slowing proton efflux from the thylakoid lumen resulting in buildup of thylakoid proton motive force (pmf). The resulting acidification of the lumen regulates both light harvesting, via the qE mechanism, and photosynthetic electron transfer through the cytochrome b 6f complex. Here in this paper, we show that the cfq mutant of Arabidopsis, harboring single point mutation in its γ-subunit of the chloroplast ATP synthase, increases the specific activity of the ATP synthase and disables its down-regulation under low CO 2. The increased thylakoid proton conductivitymore » (g H +) in cfq results in decreased pmf and lumen acidification, preventing full activation of qE and more rapid electron transfer through the b6f complex, particularly under low CO 2 and fluctuating light. These conditions favor the accumulation of electrons on the acceptor side of PSI, and result in severe loss of PSI activity. Comparing the current results with previous work on the pgr5 mutant suggests a general mechanism where increased PSI photodamage in both mutants is caused by loss of pmf, rather than inhibition of CEF per se. Overall, our results support a critical role for ATP synthase regulation in maintaining photosynthetic control of electron transfer to prevent photodamage.« less

Spatiotemporal heterogeneity in carbon exchange at a restored peatland in Alberta, Canada

NASA Astrophysics Data System (ADS)

MacDonald, Scott; Strachan, Ian; Strack, Maria

2017-04-01

Boreal peatlands store a substantial portion of Earth's soil carbon, but the commercial peat extraction process upsets this carbon-sink dynamic. A best-practices restoration process has been developed that aims to return the vegetation and ecosystem functions of post-extraction peatlands. This includes the blocking and infilling of ditches, leveling of the peatland surface and re-introduction of vegetation through the moss layer transfer technique. The dynamics of carbon gas exchange in these restored peatlands are still poorly understood. We investigated ecosystem-scale and microscale carbon flux in a recently restored, post-extraction peatland near Seba Beach, Alberta, Canada. Two eddy covariance (EC) towers continuously measured CO2 and CH4 fluxes in hydrologically distinct parts of the peatland site. Here, we report on growing season measurements made during the fourth year following extraction. Regular static chamber measurements during June-August 2016 were also taken to study gas fluxes across an infilled drainage ditch on the site. Results suggest that if the peatland restoration process successfully returns high water table position, strong carbon uptake may be attained within several years of restoration. However, differences in peatland topography resulted spatial heterogeneity in carbon dynamics at this restored site. A gradient of revegetation success and attendant carbon-flux dynamics were observed, with much stronger net uptake of CO2 and substantial CH4 efflux measured at the tower with higher vegetation cover. Revegetation elsewhere was much sparser, and thus low CO2 uptake rates persisted at much of the peatland, though these conditions conversely inhibited substantial CH4 efflux. More broadly, the contrast in flux data between our two EC towers at the site suggests that attention be made to the selection of representative carbon flux values in similar restored peatlands.

An alternative physiological role for the EmhABC efflux pump in Pseudomonas fluorescens cLP6a

PubMed Central

2011-01-01

Background Efflux pumps belonging to the resistance-nodulation-division (RND) superfamily in bacteria are involved in antibiotic resistance and solvent tolerance but have an unknown physiological role. EmhABC, a RND-type efflux pump in Pseudomonas fluorescens strain cLP6a, extrudes hydrophobic antibiotics, dyes and polycyclic aromatic hydrocarbons including phenanthrene. The effects of physico-chemical factors such as temperature or antibiotics on the activity and expression of EmhABC were determined in order to deduce its physiological role(s) in strain cLP6a in comparison to the emhB disruptant strain, cLP6a-1. Results Efflux assays conducted with 14C-phenanthrene showed that EmhABC activity is affected by incubation temperature. Increased phenanthrene efflux was measured in cLP6a cells grown at 10°C and decreased efflux was observed at 35°C compared with cells grown at the optimum temperature of 28°C. Membrane fatty acids in cLP6a cells were substantially altered by changes in growth temperature and in the presence of tetracycline. Changed membrane fatty acids and increased membrane permeability were associated with ~30-fold increased expression of emhABC in cLP6a cells grown at 35°C, and with increased extracellular free fatty acids. Growth of P. fluorescens cLP6a at supra-optimal temperature was enhanced by the presence of EmhABC compared to strain cLP6a-1. Conclusions Combined, these observations suggest that the EmhABC efflux pump may be involved in the management of membrane stress effects such as those due to unfavourable incubation temperatures. Efflux of fatty acids replaced as a result of membrane damage or phospholipid turnover may be the primary physiological role of the EmhABC efflux pump in P. fluorescens cLP6a. PMID:22085438

Stimulation of accumbal GABAA receptors inhibits delta2-, but not delta1-, opioid receptor-mediated dopamine efflux in the nucleus accumbens of freely moving rats.

PubMed

Aono, Yuri; Kiguchi, Yuri; Watanabe, Yuriko; Waddington, John L; Saigusa, Tadashi

2017-11-15

The nucleus accumbens contains delta-opioid receptors that may reduce inhibitory neurotransmission. Reduction in GABA A receptor-mediated inhibition of accumbal dopamine release due to delta-opioid receptor activation should be suppressed by stimulating accumbal GABA A receptors. As delta-opioid receptors are divided into delta2- and delta1-opioid receptors, we analysed the effects of the GABA A receptor agonist muscimol on delta2- and delta1-opioid receptor-mediated accumbal dopamine efflux in freely moving rats using in vivo microdialysis. Drugs were administered intracerebrally through the dialysis probe. Doses of compounds indicate total amount administered (mol) during 25-50min infusions. The delta2-opioid receptor agonist deltorphin II (25.0nmol)- and delta1-opioid receptor agonist DPDPE (5.0nmol)-induced increases in dopamine efflux were inhibited by the delta2-opioid receptor antagonist naltriben (1.5nmol) and the delta1-opioid receptor antagonist BNTX (150.0pmol), respectively. Muscimol (250.0pmol) inhibited deltorphin II (25.0nmol)-induced dopamine efflux. The GABA A receptor antagonist bicuculline (50.0pmol), which failed to affect deltorphin II (25.0nmol)-induced dopamine efflux, counteracted the inhibitory effect of muscimol on deltorphin II-induced dopamine efflux. Neither muscimol (250.0pmol) nor bicuculline (50.0 and 500.0pmol) altered DPDPE (5.0nmol)-induced dopamine efflux. The present results show that reduction in accumbal GABA A receptor-mediated inhibition of dopaminergic activity is necessary to produce delta2-opioid receptor-induced increase in accumbal dopamine efflux. This study indicates that activation of delta2- but not delta1-opioid receptors on the cell bodies and/or terminals of accumbal GABAergic interneurons inhibits GABA release and, accordingly, decreases GABA A receptor-mediated inhibition of dopaminergic terminals, resulting in enhanced accumbal dopamine efflux. Copyright © 2017 Elsevier B.V. All rights reserved.

Precursory signals of the 2014-15 Fogo eruption (Cape Verde) detected by surface CO2 emission and heat flow observations

NASA Astrophysics Data System (ADS)

Pérez, Nemesio M.; Dionis, Samara; Fernandes, Paulo; Barrancos, José; Rodríguez, Fátima; Bandomo, Zuleyka; Hernández, Pedro A.; Melián, Gladys V.; Silva, Sónia; Padilla, Germán; Padrón, Eleazar; Cabral, Jeremias; Calvo, David; Asensio-Ramos, María; Pereira, José Manuel; Gonçalves, António A.; Barros, Inocencio; Semedo, Helio

2015-04-01

On November 23, 2014 a new eruption occurred at Fogo volcano (Cape Verde) after 19 years of the last eruptive event in 1995. In the case of the 1995 Fogo eruption, a volcano monitoring program for the volcanic surveillance of Fogo did not exist. On the contrary, a simple and multidisciplinary volcano monitoring program was initiated since 2007 to detect early warning signals of a new volcanic unrest such as the 2014-15 Fogo eruption. Diffuse CO2 emission surveys at the summit crater of Pico do Fogo volcano were periodically carried out from May 2007 to October 2014 to provide this multidisciplinary approach and to monitor potential volcanic activity changes. During this 7 year period, CO2 efflux ranged from non detectable (< 1.5 g m-2 d-1) up to relatively high (61.9 kg m-2 d-1) values. The observed average δ13C- CO2 values related to these diffuse CO2 emission surveys ranged from -22.1 to 1.6 ‰, and surface heat flux measurements, following the method of Dawson (1964), showed also a wide range of values from 0.1 to 460 W m-2. Areas with the highest observed CO2 efflux values were also characterized by a relatively high soil temperature and an intense surface hydrothermal alteration, which supports that degassing process is primary controlled by an advective mechanism generated by geothermal gradients (convection). Two periods of anomalous diffuse CO2 emission were observed between February 2009 to February 2010 and March to August 2014, respectively. Rest of surveys showed the lowest variability on diffuse CO2 emission, ranging from 23 to 186 t d-1 (average = 86 t d-1). The first anomalous period was characterized by a sharp increase on diffuse CO2 emission, suggesting the first magma intrusion beneath Pico do Fogo volcano. This observation is also supported by a significant change on the δ13C- CO2 signature from May 2009 (-10.2 ‰) to February 2010 (-6.1‰) of the diffuse CO2 degassing, indicating an enrichment on the magmatic CO2 component. On February 2010, the diffuse CO2 emission rate was 219 ± 36 t d-1 (Dionis et al., 2015). The second anomalous period started on March 2014, eight months before the 2014-15 Fogo eruption onset, and reached a relatively high value of 337 ± 119 t d-1 on August 30, 2014. It was likely caused by rising of magmatic gases from a second magma intrusion which ended on an eruption. Heat flow temporal evolution during the observation period also shows a quasi-continuous increase before the eruption onset, with the maximum observed heat flow (16.4 ± 3.4 MW) on March 2014. These geochemical and geophysical evidences are clearly precursory signals of the 2014-15 Fogo eruption. Dawson, G.B. (1964), N Z J Geol Geophys 7:155-171; Dionis S. et al. (2015), Bull. Volcanol., in press

Overexpression and deletion of phospholipid transfer protein reduce HDL mass and cholesterol efflux capacity but not macrophage reverse cholesterol transport[S

PubMed Central

Kuwano, Takashi; Bi, Xin; Cipollari, Eleonora; Yasuda, Tomoyuki; Lagor, William R.; Szapary, Hannah J.; Tohyama, Junichiro; Millar, John S.; Billheimer, Jeffrey T.; Lyssenko, Nicholas N.; Rader, Daniel J.

2017-01-01

Phospholipid transfer protein (PLTP) may affect macrophage reverse cholesterol transport (mRCT) through its role in the metabolism of HDL. Ex vivo cholesterol efflux capacity and in vivo mRCT were assessed in PLTP deletion and PLTP overexpression mice. PLTP deletion mice had reduced HDL mass and cholesterol efflux capacity, but unchanged in vivo mRCT. To directly compare the effects of PLTP overexpression and deletion on mRCT, human PLTP was overexpressed in the liver of wild-type animals using an adeno-associated viral (AAV) vector, and control and PLTP deletion animals were injected with AAV-null. PLTP overexpression and deletion reduced plasma HDL mass and cholesterol efflux capacity. Both substantially decreased ABCA1-independent cholesterol efflux, whereas ABCA1-dependent cholesterol efflux remained the same or increased, even though preβ HDL levels were lower. Neither PLTP overexpression nor deletion affected excretion of macrophage-derived radiocholesterol in the in vivo mRCT assay. The ex vivo and in vivo assays were modified to gauge the rate of cholesterol efflux from macrophages to plasma. PLTP activity did not affect this metric. Thus, deviations in PLTP activity from the wild-type level reduce HDL mass and ex vivo cholesterol efflux capacity, but not the rate of macrophage cholesterol efflux to plasma or in vivo mRCT. PMID:28137768

Efflux-Mediated Drug Resistance in Bacteria: an Update

PubMed Central

Li, Xian-Zhi; Nikaido, Hiroshi

2010-01-01

Drug efflux pumps play a key role in drug resistance and also serve other functions in bacteria. There has been a growing list of multidrug and drug-specific efflux pumps characterized from bacteria of human, animal, plant and environmental origins. These pumps are mostly encoded on the chromosome although they can also be plasmid-encoded. A previous article (Li X-Z and Nikaido H, Drugs, 2004; 64[2]: 159–204) had provided a comprehensive review regarding efflux-mediated drug resistance in bacteria. In the past five years, significant progress has been achieved in further understanding of drug resistance-related efflux transporters and this review focuses on the latest studies in this field since 2003. This has been demonstrated in multiple aspects that include but are not limited to: further molecular and biochemical characterization of the known drug efflux pumps and identification of novel drug efflux pumps; structural elucidation of the transport mechanisms of drug transporters; regulatory mechanisms of drug efflux pumps; determining the role of the drug efflux pumps in other functions such as stress responses, virulence and cell communication; and development of efflux pump inhibitors. Overall, the multifaceted implications of drug efflux transporters warrant novel strategies to combat multidrug resistance in bacteria. PMID:19678712

Efflux mediated adaptive and cross resistance to ciprofloxacin and benzalkonium chloride in Pseudomonas aeruginosa of dairy origin.

PubMed

Pagedar, Ankita; Singh, Jitender; Batish, Virender K

2011-06-01

The present study was undertaken to investigate the role of efflux pump activity (EPA) in conferring adaptive and cross resistances against ciprofloxacin (CF) and benzalkonium chloride (BC) in dairy isolates of Pseudomonas aeruginosa. Biofilm formation potential was correlated with development of adaptive resistance in originally resistant strains. Irrespective of parent strains's susceptibility, isolates developed substantial adaptive resistance against CF and BC. Significant difference was observed in ability of non resistant isolates to develop adaptive resistance against CF and BC (P < 0.02) and subsequent cross resistance. EPA was quantified using EtBr (Ethidium Bromide) model and its role was more prominent [confirmed by its inhibition using efflux pump inhibitor (EPI) 2,4-dinitrophenol (DNP)], in conferring adaptive resistance (P = 0.147) than cross resistance (P = 0.343). Reduction in adaptive resistances due to EPI was more evident in originally non resistant strains, which reaffirms EPA as probable mechanism of adaptive resistance. The present study perhaps first of its kind, suggests an active role of EPA in conferring adaptive and cross resistances in food related P. aeruginosa isolates and supports reverse hypothesis that antibiotic-resistant organisms eventually become tolerant to other antibacterial agents as well. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Coupling of UDP-glucuronosyltransferases and multidrug resistance-associated proteins is responsible for the intestinal disposition and poor bioavailability of emodin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Wei; Feng, Qian; Li, Ye

2012-12-15

Emodin is a poorly bioavailable but promising plant-derived anticancer drug candidate. The low oral bioavailability of emodin is due to its extensive glucuronidation in the intestine and liver. Caco-2 cell culture model was used to investigate the interplay between UDP-glucuronosyltransferases (UGTs) and efflux transporters in the intestinal disposition of emodin. Bidirectional transport assays of emodin at different concentrations were performed in the Caco-2 monolayers with or without multidrug resistance-associated protein (MRP) and breast cancer resistance protein (BCRP) efflux transporter chemical inhibitors. The bidirectional permeability of emodin and its glucuronide in the Caco-2 monolayers was determined. Emodin was rapidly metabolized tomore » emodin glucuronide in Caco-2 cells. LTC4, a potent inhibitor of MRP2, decreased the efflux of emodin glucuronide and also substantially increased the intracellular glucuronide level in the basolateral-to-apical (B–A) direction. MK-571, chemical inhibitor of MRP2, MRP3, and MRP4, significantly reduced the efflux of glucuronide in the apical-to-basolateral (A–B) and B–A directions in a dose-dependent manner. However, dipyridamole, a BCRP chemical inhibitor demonstrated no effect on formation and efflux of emodin glucuronide in Caco-2 cells. In conclusion, UGT is a main metabolic pathway for emodin in the intestine, and the MRP family is composed of major efflux transporters responsible for the excretion of emodin glucuronide in the intestine. The coupling of UGTs and MRP efflux transporters causes the extensive metabolism, excretion, and low bioavailability of emodin. -- Highlights: ► Glucuronidation is the main reason for the poor oral bioavailability of emodin. ► Efflux transporters are involved in the excretion of emodin glucuronide. ► The intestine is the main organ for metabolism of emodin.« less

Quantifying the impacts of land use change on soil organic carbon losses in tropical peatlands

NASA Astrophysics Data System (ADS)

Farmer, J.; Smith, J.; Smith, P.; Matthews, R.

2012-04-01

The challenge of collecting field measurements of soil carbon dioxide (CO2) efflux and soil carbon (C) in tropical peatlands creates an opportunity for the use of SOC models for predicting local and regional impacts of land use and climate change on these soils, offering a way of translating this limited data into tangible results. Previously, no soil C model existed for use in non-steady state sites such as those found on tropical peats- in particular peat swamp forests which accumulate C, and oil palm plantations which are grown for 20-25 years between re-plantings. A simple, user friendly model has been created for use by scientists, policy makers and plantation managers. This model uses only limited inputs to predict the changes to soil C from land use and climate change. The model runs on the assumption that plant inputs can be related to yield, and that this can be used to derive the decomposition of SOM. It uses a simple decomposition response to determine the changes to the soil C. The model can run in a basic form if data is very limited, or a more complex form with modifiers for temperature, pH, salinity and soil moisture if this data is available. Using measured CO2 efflux and soil C values from peat cores, combined with literature values, we demonstrate the efficacy of the model, showing how we have identified and addressed some of the issues related to modelling soil C losses from tropical peat soils under land use change. Key challenges addressed included quantifying the effects of drainage when peat swamp forests are converted to oil palm plantations, and comparing field results between sites because in oil palm plantations the original soil conditions prior to conversion from peat swamp forest were largely unknown.

Efflux of drugs and solutes from brain: the interactive roles of diffusional transcapillary transport, bulk flow and capillary transporters.

PubMed

Groothuis, Dennis R; Vavra, Michael W; Schlageter, Kurt E; Kang, Eric W-Y; Itskovich, Andrea C; Hertzler, Shannon; Allen, Cathleen V; Lipton, Howard L

2007-01-01

We examined the roles of diffusion, convection and capillary transporters in solute removal from extracellular space (ECS) of the brain. Radiolabeled solutes (eight with passive distribution and four with capillary or cell transporters) were injected into the brains of rats (n=497) and multiple-time point experiments measured the amount remaining in brain as a function of time. For passively distributed compounds, there was a relationship between lipid:water solubility and total brain efflux:diffusional efflux, which dominated when k(p), the transcapillary efflux rate constant, was >10(0) h(-1); when 10(-1)

Role for a Steroid Sulfontransferase (SULT2B) in the Intratumoral Androgen Metabolism and in Prostate Cancer

DTIC Science & Technology

2015-10-01

failure and other adverse events. AUC for atorvastatin was elevated more than 600% in healthy volunteers when a single dose of rifampin was co...administered with the statin. Rifampin-induced inhibition of OATP for atorvastatin caused elevated AUC (Lau et al, 2007). Long-term rifampin treatment...however, reduced atorvastatin bioavailability due to induced expression of CYP3A4 and efflux transporters by rifampin-activated PXR. Various

pH Dependent but not P-gp Dependent Bidirectional Transport Study of S-propranolol: The Importance of Passive Diffusion.

PubMed

Zheng, Yi; Benet, Leslie Z; Okochi, Hideaki; Chen, Xijing

2015-08-01

Recent controversial publications, citing studies purporting to show that P-gp mediates the transport of propranolol, proposed that passive biological membrane transport is negligible. Based on the BDDCS, the extensively metabolized-highly permeable-highly soluble BDDCS class 1 drug, propranolol, shows a high passive permeability at concentrations unrestricted by solubility that can overwhelm any potential transporter effects. Here we reinvestigate the effects of passive diffusion and carrier-mediated transport on S-propranolol. Bidirectional permeability and inhibition of efflux transport studies were carried out in MDCK, MDCK-MDR1 and Caco-2 cell lines at different concentrations. Transcellular permeability studies were conducted at different apical pHs in the rat jejunum Ussing chamber model and PAMPA system. S-propranolol exhibited efflux ratios lower than 1 in MDCK, MDCK-MDR1 and Caco-2 cells. No significant differences of Papp, B->A in the presence and absence of the efflux inhibitor GG918 were observed. However, an efflux ratio of 3.63 was found at apical pH 6.5 with significant decrease in Papp, A->B and increase in Papp, B->A compared to apical pH 7.4 in Caco-2 cell lines. The pH dependent permeability was confirmed in the Ussing chamber model. S-propranolol flux was unchanged during inhibition by verapamil and rifampin. Furthermore, pH dependent permeability was also observed in the PAMPA system. S-propranolol does not exhibit active transport as proposed previously. The "false" positive efflux ratio can be explained by the pH partition theory. As expected, passive diffusion, but not active transport, plays the primary role in the permeability of the BDDCS class 1 drug propranolol.

pH dependent but not P-gp dependent bidirectional transport study of S-propranolol: the importance of passive diffusion

PubMed Central

Zheng, Yi; Benet, Leslie Z.; Okochi, Hideaki; Chen, Xijing

2016-01-01

Purpose Recent controversial publications, citing studies purporting to show that P-gp mediates the transport of propranolol, proposed that passive biological membrane transport is negligible. Based on the BDDCS, the extensively metabolized-highly permeable-highly soluble BDDCS class 1 drug, propranolol, shows a high passive permeability at concentrations unrestricted by solubility that can overwhelm any potential transporter effects. Here we reinvestigate the effects of passive diffusion and carrier-mediated transport on S-propranolol. Methods Bidirectional permeability and inhibition of efflux transport studies were carried out in MDCK, MDCK-MDR1 and Caco-2 cell lines at different concentrations. Transcellular permeability studies were conducted at different apical pHs in the rat jejunum Ussing chamber model and PAMPA system. Results S-propranolol exhibited efflux ratios lower than 1 in MDCK, MDCK-MDR1 and Caco-2 cells. No significant differences of Papp, B->A in the presence and absence of the efflux inhibitor GG918 were observed. However, an efflux ratio of 3.63 was found at apical pH 6.5 with significant decrease in Papp, A->B and increase in Papp, B->A compared to apical pH 7.4 in Caco-2 cell lines. The pH dependent permeability was confirmed in the Ussing chamber model. S-propranolol flux was unchanged during inhibition by verapamil and rifampin. Furthermore, pH dependent permeability was also observed in the PAMPA system. Conclusions S-propranolol does not exhibit active transport as proposed previously. The "false" positive efflux ratio can be explained by the pH partition theory. As expected, passive diffusion, but not active transport, plays the primary role in the permeability of the BDDCS class 1 drug propranolol. PMID:25690341

Monitoring diffuse degassing in monogentic volcanic field during magmatic reactivation: the case of El Hierro (Canary Islands, Spain)

NASA Astrophysics Data System (ADS)

Morales-Ocaña, C.; Feldman, R. C.; Pointer, Z. R.; Rodríguez, F.; Asensio-Ramos, M.; Melián, G.; Padrón, E.; Hernández, P. A.; Pérez, N. M.

2017-12-01

El Hierro (278 km2), the younger, smallest and westernmost island of the Canarian archipelago, is a 5-km-high edifice constructed by rapid constructive and destructive processes in 1.12 Ma, with a truncated trihedron shape and three convergent ridges of volcanic cones. It experienced a submarine eruption from 12 October, 2011 and 5 March 2012, off its southern coast that was the first one to be monitored from the beginning in the Canary Islands. As no visible emanations occur at the surface environment of El Hierro, diffuse degassing studies have become a useful geochemical tool to monitor the volcanic activity in this volcanic island. Diffuse CO2 emission has been monitored at El Hierro Island since 1998 in a yearly basis, with much higher frequency in the period 2011-2012. At each survey, about 600 sampling sites were selected to obtain a homogeneous distribution. Measurements of soil CO2 efflux were performed in situ following the accumulation chamber method. During pre-eruptive and eruptive periods, the diffuse CO2 emission released by the whole island experienced significant increases before the onset of the submarine eruption and the most energetic seismic events of the volcanic-seismic unrest (Melián et al., 2014. J. Geophys. Res. Solid Earth, 119, 6976-6991). The soil CO2 efflux values of the 2017 survey ranged from non-detectable to 53.1 g m-2 d-1. Statistical-graphical analysis of the data show two different geochemical populations; background (B) and peak (P) represented by 77.6% and 22.4% of the total data, respectively, with geometric means of 1.8 and 9.2 g m-2 d-1, respectively. Most of the area showed B values while the P values were mainly observed at the interception center of the three convergent ridges and the north of the island. To estimate the diffuse CO2 emission for the 2017 survey, we ran about 100 sGs simulations. The estimated 2017 diffuse CO2 output released to atmosphere by El Hierro was at 1,150 ± 42 t d-1, value higher than the background average of CO2 emission estimated on 422 t d-1 and slightly higher than the background range of 181 t d-1 (-1σ) and 930 t d-1 (+1σ) estimated at El Hierro volcano during the quiescence period 1998-2010 (Melián et al., 2014, JGR). Monitoring the diffuse CO2 emission has proven to be a very effective tool to detect early warning signals of volcanic unrest at El Hierro.

Understanding environmental drivers in the regulation of soil respiration dynamics after fire in semi-arid ecosystems

NASA Astrophysics Data System (ADS)

Muñoz-Rojas, Miriam; Lewandrowski, Wolfgang; Erickson, Todd E.; Dixon, Kingsley W.; Merritt, David J.

2016-04-01

Keywords: Pilbara, soil CO2 efflux, soil C, soil moisture, soil temperature Introduction Soil respiration (Rs) has become a major research focus given the increase in atmospheric CO2 emissions and the large contribution of these CO2 fluxes from soils (Van Groenigen et al., 2014). In addition to its importance in the global C cycle, Rs is a fundamental indicator of soil health and quality that reflects the level of microbial activity and provides an indication of the ability of soils to support plant growth (Oyonarte et al., 2012; Munoz-Rojas et al., 2015). Wildfires can have a significant impact on Rs rates, with the scale of the impact depending on environmental factors such as temperature and moisture, and organic C content in the soil. Vegetation cover can have a significant effect on regulating organic C contents; and while advances are made into understanding the effects of fire on organic C contents and CO2 fluxes (Granged et al., 2011; Willaarts et al., 2015; Muñoz-Rojas et al., 2016), there is limited knowledge of the variability of Rs across ecosystem types, vegetation communities, and responses to fire. In this research we aimed to assess the impacts of a wildfire on the soil CO2 fluxes and soil respiration in a semi-arid ecosystem of Western Australia (Pilbara biogeographical region), and to understand the main environmental drivers controlling these fluxes in different vegetation types. The study has application for other arid and semi-arid regions of the world. Methods The study area was selected following a wildfire that affected 25 ha in February 2014. Twelve plots were established in the burnt site (B) within a 400 m2 area, and 12 plots in an adjacent unburnt control site. At each site, three plots were installed below the canopy of each of the most representative vegetation types of the areas: Eucalyptus trees, Acacia shrubs and Triodia grasses, and three on bare soil. Soil sampling and measurement of soil CO2 efflux, temperature and moisture were carried out one week after wildfire in the summer-wet season (February 2014) and repeated six months (in July 2014, during the winter-dry season) and twelve months after the wildfire (in February 2015, during the following summer-wet season). Soil physicochemical analyses were undertaken according to standard methods. Rs was measured with a 6400-09 portable soil CO2 flux chamber attached to a LI-COR 6400. Soil temperature was measured with a thermometer attached to the LI-COR and soil moisture with a portable Moisture Probe MP406. Both temperature and moisture were measured directly adjacent to the collars and simultaneously with Rs at a depth of 5 cm. Results and discussion Larger rates of Rs were found in the burnt areas compared to those unburnt. However, Rs showed a large variation among vegetation types in both burnt and unburnt areas for each time period following fire and Rs and soil organic C were consistently higher under Eucalyptus trees. Environmental factors (temperature and moisture) could explain a large fraction of Rs variability and therefore the roles of both water availability and temperature are critical to explain the CO2 fluxes in these environments. Yet, these relations are variable and change across vegetation types, indicating that specific models need to be used to accurately estimate Rs rates. This study demonstrates the importance of assessing CO2 fluxes following fire considering both environmental factors and vegetation types. This is particularly important in heterogeneous semi-arid areas that are characterized by patchy vegetation distribution where CO2 fluxes can be largely underestimated. References Granged, A.J.P., Jordán, A., Zavala, L.M, Muñoz-Rojas, M., Mataix-Solera, J., 2011. Short-term effects of experimental fire for a soil under eucalyptus forest (SE Australia). Geoderma 167-168, 125-134. Muñoz-Rojas, M., Lewandrowski, W., Martini, D., Erickson, T., Merritt, D., Dixon, K. 2015. Seasonal dynamics of soil CO2 efflux in biodiverse semi-arid ecosystems of Western Australia. Geophysical Research. Abstracts Vol. 17, EGU2015-3961-1, EGU General Assembly. Muñoz-Rojas, M., Erickson, T.E., Martini, D., Dixon, K.W., Merritt, D.J. 2016. Soil physicochemical and microbiological indicators of short, medium and long term post-fire recovery in semi-arid ecosystems. Ecological indicators 63,14-22. Oyonarte, C., Rey, A., Raimundo, J., Miralles, I., Escribano, P., 2012. The use of soil respiration as an ecological indicator in arid ecosystems of the SE of Spain: spatial variability and controlling factors. Ecological Indicators 14, 40-49. Van Groenigen, K.J., Qi, X., Osenberg, C.W., Luo, Y., Hungate, B.A., 2014. Faster Decomposition under Increased Atmospheric CO2 Limits Soil Carbon Storage. Science 344, 508 Willaarts, B.A., Oyonarte, C., Muñoz-Rojas, M., Ibáñez, J.J. and Aguilera, P.A. 2015. Environmental Factors Controlling Soil Organic Carbon Stocks in Two Contrasting Mediterranean Climatic Areas of Southern Spain. Land Degradation and Development (on-line). DOI: 10.1002/ldr.2417

An ex vivo study of nitric oxide efflux from human erythrocytes in both genders.

PubMed

Duarte, Catarina; Napoleão, Patrícia; Freitas, Teresa; Saldanha, Carlota

2016-01-01

Acetylcholinesterase (AChE) is located on outer surface of erythrocyte membrane. Gender-related differences in erythrocyte AChE enzyme activity had been verified in young adults. It is also known that binding of acetylcholine (ACh) with AChE on erythrocyte membrane initiates a signal transduction mechanism that stimulates nitric oxide (NO) efflux. This ex vivo study was done to compare the amount of NO efflux obtained from erythrocytes of healthy donors in males and females. We included 66 gender age-matched healthy donors (40-60 years old). We performed quantification of erythrocyte NO efflux from erythrocytes and of the membrane AChE enzyme activity. There are no significant differences in NO efflux from erythrocytes between men and women. Regarding AChE enzyme activity values, in this range of age, no differences between genders were obtained. However, the values of AChE enzyme activity in the third quartile of NO efflux values were significantly higher (p < 0.05) in women than in men. The efflux of NO from erythrocyte of healthy humans did not change with gender. For the same range of values of NO efflux from erythrocytes, in both gender, it was verified higher values of AChE enzyme activity in women.

Carbonate buffering and metabolic controls on carbon dioxide in rivers

USGS Publications Warehouse

Stets, Edward; Butman, David; McDonald, Cory P.; Stackpoole, Sarah M.; DeGrandpre, Michael D.; Striegl, Robert G.

2017-01-01

Multiple processes support the significant efflux of carbon dioxide (CO2) from rivers and streams. Attribution of CO2 oversaturation will lead to better quantification of the freshwater carbon cycle and provide insights into the net cycling of nutrients and pollutants. CO2 production is closely related to O2consumption because of the metabolic linkage of these gases. However, this relationship can be weakened due to dissolved inorganic carbon inputs from groundwater, carbonate buffering, calcification, and anaerobic metabolism. CO2and O2 concentrations and other water quality parameters were analyzed in two data sets: a synoptic field study and nationwide water quality monitoring data. CO2 and O2 concentrations were strongly negatively correlated in both data sets (ρ = −0.67 and ρ = −0.63, respectively), although the correlations were weaker in high-alkalinity environments. In nearly all samples, the molar oversaturation of CO2 was a larger magnitude than molar O2 undersaturation. We used a dynamically coupled O2CO2 model to show that lags in CO2 air-water equilibration are a likely cause of this phenomenon. Lags in CO2 equilibration also impart landscape-scale differences in the behavior of CO2 between high- and low-alkalinity watersheds. Although the concept of carbonate buffering and how it creates lags in CO2 equilibration with the atmosphere is well understood, it has not been sufficiently integrated into our understanding of CO2 dynamics in freshwaters. We argue that the consideration of carbonate equilibria and its effects on CO2 dynamics are primary steps in understanding the sources and magnitude of CO2 oversaturation in rivers and streams.

Enhancement of antibiotic activity by efflux inhibitors against multidrug resistant Mycobacterium tuberculosis clinical isolates from Brazil

PubMed Central

Coelho, Tatiane; Machado, Diana; Couto, Isabel; Maschmann, Raquel; Ramos, Daniela; von Groll, Andrea; Rossetti, Maria L.; Silva, Pedro A.; Viveiros, Miguel

2015-01-01

Drug resistant tuberculosis continues to increase and new approaches for its treatment are necessary. The identification of M. tuberculosis clinical isolates presenting efflux as part of their resistant phenotype has a major impact in tuberculosis treatment. In this work, we used a checkerboard procedure combined with the tetrazolium microplate-based assay (TEMA) to study single combinations between antituberculosis drugs and efflux inhibitors (EIs) against multidrug resistant M. tuberculosis clinical isolates using the fully susceptible strain H37Rv as reference. Efflux activity was studied on a real-time basis by a fluorometric method that uses ethidium bromide as efflux substrate. Quantification of efflux pump genes mRNA transcriptional levels were performed by RT-qPCR. The fractional inhibitory concentrations (FIC) indicated synergistic activity for the interactions between isoniazid, rifampicin, amikacin, ofloxacin, and ethidium bromide plus the EIs verapamil, thioridazine and chlorpromazine. The FICs ranged from 0.25, indicating a four-fold reduction on the MICs, to 0.015, 64-fold reduction. The detection of active efflux by real-time fluorometry showed that all strains presented intrinsic efflux activity that contributes to the overall resistance which can be inhibited in the presence of the EIs. The quantification of the mRNA levels of the most important efflux pump genes on these strains shows that they are intrinsically predisposed to expel toxic compounds as the exposure to subinhibitory concentrations of antibiotics were not necessary to increase the pump mRNA levels when compared with the non-exposed counterpart. The results obtained in this study confirm that the intrinsic efflux activity contributes to the overall resistance in multidrug resistant clinical isolates of M. tuberculosis and that the inhibition of efflux pumps by the EIs can enhance the clinical effect of antibiotics that are their substrates. PMID:25972842

Abundance and diversity of CO2-fixing bacteria in grassland soils close to natural carbon dioxide springs.

PubMed

Videmsek, Urska; Hagn, Alexandra; Suhadolc, Marjetka; Radl, Viviane; Knicker, Heike; Schloter, Michael; Vodnik, Dominik

2009-07-01

Gaseous conditions at natural CO2 springs (mofettes) affect many processes in these unique ecosystems. While the response of plants to extreme and fluctuating CO2 concentrations ([CO2]) is relatively well documented, little is known on microbial life in mofette soil. Therefore, it was the aim of this study to investigate the abundance and diversity of CO2-fixing bacteria in grassland soils in different distances to a natural carbon dioxide spring. Samples of the same soil type were collected from the Stavesinci mofette, a natural CO2 spring which is known for very pure CO2 emissions, at different distances from the CO2 releasing vents, at locations that clearly differed in soil CO2 efflux (from 12.5 to over 200 micromol CO2 m(-2) s(-1) yearly average). Bulk and rhizospheric soil samples were included into analyses. The microbial response was followed by a molecular analysis of cbbL genes, encoding for the large subunit of RubisCO, a carboxylase which is of crucial importance for C assimilation in chemolitoautotrophic microbes. In all samples analyzed, the "red-like" type of cbbL genes could be detected. In contrast, the "green-like" type of cbbL could not be measured by the applied technique. Surprisingly, a reduction of "red-like" cbbL genes copies was observed in bulk soil and rhizosphere samples from the sites with the highest CO2 concentrations. Furthermore, the diversity pattern of "red-like" cbbL genes changed depending on the CO(2) regime. This indicates that only a part of the autotrophic CO2-fixing microbes could adapt to the very high CO2 concentrations and adverse life conditions that are governed by mofette gaseous regime.

Spatial and temporal variations of diffuse CO2 degassing at El Hierro volcanic system: Relation to the 2011-2012 submarine eruption

NASA Astrophysics Data System (ADS)

Melián, Gladys; Hernández, Pedro A.; Padrón, Eleazar; Pérez, Nemesio M.; Barrancos, José; Padilla, Germán.; Dionis, Samara; Rodríguez, Fátima; Calvo, David; Nolasco, Dacil

2014-09-01

We report herein the results of extensive diffuse CO2 emission surveys performed on El Hierro Island in the period 1998-2012. More than 17,000 measurements of the diffuse CO2 efflux were carried out, most of them during the volcanic unrest period that started in July 2011. Two significant precursory signals based on geochemical and geodetical studies suggest that a magma intrusion processes might have started before 2011 in El Hierro Island. During the preeruptive and eruptive periods, the time series of the diffuse CO2 emission released by the whole island experienced two significant increases. The first started almost 2 weeks before the onset of the submarine eruption, reflecting a clear geochemical anomaly in CO2 emission, most likely due to increasing release of deep-seated magmatic gases to the surface. The second one, between 24 October and 27 November 2011, started before the most energetic seismic events of the volcanic-seismic unrest. The data presented here demonstrate that combined continuous monitoring studies and discrete surveys of diffuse CO2 emission provide important information to optimize the early warning system in volcano monitoring programs and to monitor the evolution of an ongoing volcanic eruption, even though it is a submarine eruption.

The effect of glucose on insulin release and ion movements in isolated pancreatic islets of rats in old age.

PubMed Central

Ammon, H P; Fahmy, A; Mark, M; Wahl, M A; Youssif, N

1987-01-01

1. The effect of glucose on 86Rb+ efflux, 45Ca2+ net uptake and insulin secretion of pancreatic islets from 3- and 24-month-old rats was studied. 2. Raising the glucose concentration from 3 to 5.6 and 16.7 mM had no effect on 86Rb+ efflux from islets of 24-month-old male rats whereas that from 24-month-old female rats was decreased. 3. At 16.7 mM-glucose, net uptake of 45Ca2+ was significantly diminished in islets of 24-month-old rats compared to islets of 3-month-old rats. 4. In the presence of 16.7 mM-glucose, islets of 24-month-old rats exhibited only 60-70% of the insulin release obtained with islets from 3-month-old rats. 5. Neither net uptake of 45Ca2+ nor insulin secretion appear to differ between the sexes. 6. These data suggest that the decreased insulin secretory response to glucose during old age is due, at least in part, to inadequate inhibition of K+ efflux and diminished net uptake of Ca2+. PMID:3309262

The effect of water table fluctuation on soil respiration in a lower coastal plain forested wetland in the southeastern U.S.

NASA Astrophysics Data System (ADS)

Miao, Guofang; Noormets, Asko; Domec, Jean-Christophe; Trettin, Carl C.; McNulty, Steve G.; Sun, Ge; King, John S.

2013-12-01

and environmental pressures on wetland hydrology may trigger changes in carbon (C) cycling, potentially exposing vast amounts of soil C to rapid decomposition. We measured soil CO2 efflux (Rs) continuously from 2009 to 2010 in a lower coastal plain forested wetland in North Carolina, U.S., to characterize its main environmental drivers. To understand and quantify the spatial variation due to microtopography and associated differences in hydrology, measurements were conducted at three microsites along a microtopographic gradient. The seasonal hysteresis in Rs differed by microtopographic location and was caused by the transitions between flooded and nonflooded conditions. Because flooded Rs was small, we reported Rs dynamics mainly during nonflooded periods. A nested model, modified from conventional Q10 (temperature sensitivity) model with dynamic parameters, provided a significantly better simulation on the observed variation of Rs. The model performed better with daily data, indicating that soil temperature (Ts) and water table depth (WTD) were the primary drivers for seasonal variation. The diel variation of Rs was high and independent of Ts and WTD, which both had small diel variations, suggesting the likely association with plant activity. Overall, the site-average soil CO2 efflux was approximately 960-1103 g C m-2 yr-1 in 2010, of which 93% was released during nonflooded periods. Our study indicates that Rs is highly linked to hydroperiod and microtopography in forested wetlands and droughts in wetlands will accelerate soil C loss.

Effect of geological carbon sources on eddy covariance measurements: analysis and possible correction approaches

NASA Astrophysics Data System (ADS)

Papale, D.; Rey, A.; Belelli-Marchesini, L.; Etiope, G.; Pegoraro, E.

2013-12-01

A recent set of studies carried out in the SE of Spain highlighted the need to consider geological carbon sources when estimating the net ecosystem carbon balance (NECB) of terrestrial ecosystems located in areas potentially affected by geofluid circulation. In this study we present the mechanisms and propose a new methodology using physical parameters of the atmospheric boundary layer to quantify the CO2 coming from deep origin. To test our approach, we compare NECB estimates with seasonal patterns of soil CO2 efflux and vegetation activity measured by satellite images (NDVI) over two-year period at this site (2007/2008). According with the eddy covariance measurements the alpha grass ecosystem was a net carbon source (93.7 and 145.0 g C m-2, for the years 2007 and 2008, respectively) particularly as a result of large amounts of carbon released over the dry period. This relevant CO2 emission (reaching up to 15 umol m-2 s-1) was however not related to ecosystem activities as confirmed by measurements of soil CO2 efflux using chambers (ca. 0.5 umol m-2 s-1) and plant productivity that was minimal during this period. A simple correction based on a linear relationship between NECB and wind speed for different stability conditions and wind sectors has been used to estimate the geological flux FGEO and subtracted it from the NECB to obtain the biological flux FBIO. We then partitioned FBIO into gross primary productivity and ecosystem respiration and proved that, after removing FGEO, ecosystem and soil respiration followed similar temporal patterns. The annual contribution of the geological component to NECB was 49.6 and 46.7 % for the year 2007 and 2008, respectively. Therefore, potential contribution of geological carbon sources should be tested and quantified in those ecosystems located in areas with potential natural emission of geologic gases to the surface. References: REY A., BELELLI MARCHESINI L., WERE A., SERRANO ORTIZ P., ETIOPE G., PAPALE D, DOMINGO F., PEGORARO E. (2012). Wind as a main driver of the net ecosystem carbon balance of a semiarid Mediterranean steppe in the South East of Spain. GLOBAL CHANGE BIOLOGY, vol. 18, p. 539-554 REY A., ETIOPE G., BELELLI-MARCHESINI L., PAPALE D, VALENTINI R. (2012). Geologic carbon sources may confound ecosystem carbon balance estimates: Evidence from a semiarid steppe in the southeast of Spain. JOURNAL OF GEOPHYSICAL RESEARCH. BIOGEOSCIENCES, vol. 117 REY A., BELELLI-MARCHESINI L., ETIOPE G., PAPALE D., CANFORA E., VALENTINI R., PEGORARO E. (2013) Partitioning the net ecosystem carbon balance of a semiarid steppe into biological and geological carbon components. BIOGEOCHEMISTRY, (in review)

Elevated Carbon Dioxide Alleviates Aluminum Toxicity by Decreasing Cell Wall Hemicellulose in Rice (Oryza sativa)

PubMed Central

Zhu, Xiao Fang; Zhao, Xu Sheng; Wang, Bin; Wu, Qi; Shen, Ren Fang

2017-01-01

Carbon dioxide (CO2) is involved in plant growth as well as plant responses to abiotic stresses; however, it remains unclear whether CO2 is involved in the response of rice (Oryza sativa) to aluminum (Al) toxicity. In the current study, we discovered that elevated CO2 (600 μL·L−1) significantly alleviated Al-induced inhibition of root elongation that occurred in ambient CO2 (400 μL·L−1). This protective effect was accompanied by a reduced Al accumulation in root apex. Al significantly induced citrate efflux and the expression of OsALS1, but elevated CO2 had no further effect. By contrast, elevated CO2 significantly decreased Al-induced accumulation of hemicellulose, as well as its Al retention. As a result, the amount of Al fixed in the cell wall was reduced, indicating an alleviation of Al-induced damage to cell wall function. Furthermore, elevated CO2 decreased the Al-induced root nitric oxide (NO) accumulation, and the addition of the NO scavenger c-PTIO (2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide) abolished this alleviation effect, indicating that NO maybe involved in the CO2-alleviated Al toxicity. Taken together, these results demonstrate that the alleviation of Al toxicity in rice by elevated CO2 is mediated by decreasing hemicellulose content and the Al fixation in the cell wall, possibly via the NO pathway. PMID:28769823

Multidrug Resistance-associated Protein-1 (MRP-1)-dependent Glutathione Disulfide (GSSG) Efflux as a Critical Survival Factor for Oxidant-enriched Tumorigenic Endothelial Cells*

PubMed Central

Gordillo, Gayle M.; Biswas, Ayan; Khanna, Savita; Spieldenner, James M.; Pan, Xueliang; Sen, Chandan K.

2016-01-01

Endothelial cell tumors are the most common soft tissue tumors in infants. Tumor-forming endothelial (EOMA) cells are able to escape cell death fate despite excessive nuclear oxidant burden. Our previous work recognized perinuclear Nox-4 as a key contributor to EOMA growth. The objective of this work was to characterize the mechanisms by which EOMA cells evade oxidant toxicity and thrive. In EOMA cells, compared with in the cytosol, the nuclear GSSG/GSH ratio was 5-fold higher. Compared to the ratio observed in healthy murine aortic endothelial (MAE) cells, GSSG/GSH was over twice as high in EOMA cells. Multidrug resistance-associated protein-1 (MRP-1), an active GSSG efflux mechanism, showed 2-fold increased activity in EOMA compared with MAE cells. Hyperactive YB-1 and Ape/Ref-1 were responsible for high MRP-1 expression in EOMA. Proximity ligand assay demonstrated MRP-1 and YB-1 binding. Such binding enabled the nuclear targeting of MRP-1 in EOMA in a leptomycin-B-sensitive manner. MRP-1 inhibition as well as knockdown trapped nuclear GSSG, causing cell death of EOMA. Disulfide loading of cells by inhibition of GSSG reductase (bischoloronitrosourea) or thioredoxin reductase (auranofin) was effective in causing EOMA death as well. In sum, EOMA cells survive a heavy oxidant burden by rapid efflux of GSSG, which is lethal if trapped within the cell. A hyperactive MRP-1 system for GSSG efflux acts as a critical survival factor for these cells, making it a potential target for EOMA therapeutics. PMID:26961872

Gravel bar thermal variability and its potential consequences for CO2 evasion from Alpine coldwater streams

NASA Astrophysics Data System (ADS)

Boodoo, Kyle; Battin, Tom; Schelker, Jakob

2017-04-01

Gravel bars (GB) are ubiquitous in-stream structures with relatively large exposed surfaces, capable of absorbing heat and possibly acting as a heat source to the underlying hyporheic zone (HZ). The distinctive mixing of groundwater and surface water within their HZ largely determines its characteristic physical and biogeochemical properties, including temperature distribution. To study thermal variability within GBs and its possible consequences for CO2 evasion fluxes we analysed high frequency spatio-temporal data for a range of stream and atmospheric physical parameters including the vertical GB temperature, in an Alpine cold water stream (Oberer Seebach, Austria) over the course of a year. We found the vertical temperature profiles within the GB to vary seasonally and with discharge. We extended our study to 13 other gravel bars of varying physical characteristics within the surrounding Ybbs and Erlauf catchments, conducting diurnal spot samplings in summer 2016. Temperatures within the observed permanently wetted hyporheic zone (-56 to -100cm depth below GB surface) of the OSB, were warmer than both end members, surface water and groundwater >18% of the year, particularly during summer. There was a general increase in exceedance within the periodically wetted gravel bar sediment toward the gravel bar surface, further evidencing downward heat transfer to the wetted HZ. Average CO2 flux from the GB was significantly higher than that of streamwater during summer and winter, with significantly higher temperatures and CO2 outgassing rates occurring at the GB tail as compared to streamwater and the head and mid of the GB throughout the year. Higher cumulative (over 6 h) GB seasonal temperatures were associated with increased CO2 evasion fluxes within the OSB, particularly during summer. This enhanced CO2 flux may result from the input of warmer CO2-rich groundwater into the HZ in autumn, while downward heat transfer in summer may enhance GB metabolism and therefore CO2 evasion. Furthermore, catchment CO2 outgassing fluxes significantly exceeded that of the stream, with higher diurnal CO2 outgassing fluxes observed for all 13 GBs within the Ybbs and Erlauf catchments as compared to their respective streams. We found DOC concentration did not significantly correlate to CO2 outgassing. But, vertical temperature gradient as a measure of heat flux to the hyporheic zone explained 55% and 69% of the variability in observed CO2 efflux from the OSB gravel bar (seasonal samplings during summer 2015 - winter 2016) and 11 catchment gravel bars (2 GBs excluded due to equipment malfunction) respectively. These results highlight the effect of temperature on physical and biochemical stream processes, particularly in cold-water streams, due to the occurrence of more frequent and intense warm temperature events, as well as altered flow regimes, likely consequences of climatic change.

Decreased cholesterol efflux capacity and atherogenic lipid profile in young women with PCOS.

PubMed

Roe, Andrea; Hillman, Jennifer; Butts, Samantha; Smith, Mathew; Rader, Daniel; Playford, Martin; Mehta, Nehal N; Dokras, Anuja

2014-05-01

Women with polycystic ovary syndrome (PCOS) have a high prevalence of cardiovascular disease (CVD) risk factors including dyslipidemia. Lipoproteins are heterogeneous, and measurement of serum lipids provides only the size of the pool and does not predict their function or composition. Recently, high-density lipoprotein cholesterol (HDL-C) function, as determined by cholesterol efflux capacity from macrophages, has been shown to be an independent predictor of subclinical CVD. The aim of the study was to comprehensively evaluate lipoprotein profile including lipid particle size and number and cholesterol efflux capacity in PCOS to better define CVD risk. A case control study was performed at an academic PCOS center. Women with PCOS (n = 124) and geographically matched controls (n = 67) were included in the study. The primary outcome was to measure HDL-C efflux capacity by an ex vivo system involving the incubation of macrophages with apolipoprotein (Apo) B-depleted serum from subjects, and the secondary outcome was to measure lipid particle size and number using nuclear magnetic resonance spectroscopy. Women with PCOS had significantly higher body mass index and blood pressure but similar HDL-C and low-density lipoprotein cholesterol levels compared to controls. The mean ApoA1 levels were lower, and the ApoB/ApoA1 ratio was higher in PCOS subjects compared to controls (P < .01). There were no differences in ApoB levels. Women with PCOS had an 7% decrease in normalized cholesterol efflux capacity compared to controls (P < .003). Cholesterol efflux capacity in PCOS correlated with body mass index, ApoA1, HDL-C, and the presence of metabolic syndrome. In a multivariable regression model, PCOS was significantly associated with diminished cholesterol efflux. PCOS was also associated with an atherogenic profile including an increase in large very low-density lipoprotein particles, very low-density lipoprotein (VLDL) size, and small low-density lipoprotein cholesterol particles (P < .01). Our novel findings of decreased cholesterol efflux and an atherogenic lipid particle number and size pattern in women with PCOS, independent of obesity, further substantiate the increased risk of CVD in this population.

Decreased Cholesterol Efflux Capacity and Atherogenic Lipid Profile in Young Women With PCOS

PubMed Central

Roe, Andrea; Hillman, Jennifer; Butts, Samantha; Smith, Mathew; Rader, Daniel; Playford, Martin; Mehta, Nehal N.

2014-01-01

Context: Women with polycystic ovary syndrome (PCOS) have a high prevalence of cardiovascular disease (CVD) risk factors including dyslipidemia. Lipoproteins are heterogeneous, and measurement of serum lipids provides only the size of the pool and does not predict their function or composition. Recently, high-density lipoprotein cholesterol (HDL-C) function, as determined by cholesterol efflux capacity from macrophages, has been shown to be an independent predictor of subclinical CVD. Objective: The aim of the study was to comprehensively evaluate lipoprotein profile including lipid particle size and number and cholesterol efflux capacity in PCOS to better define CVD risk. Design and Setting: A case control study was performed at an academic PCOS center. Patients: Women with PCOS (n = 124) and geographically matched controls (n = 67) were included in the study. Main Outcome Measures: The primary outcome was to measure HDL-C efflux capacity by an ex vivo system involving the incubation of macrophages with apolipoprotein (Apo) B-depleted serum from subjects, and the secondary outcome was to measure lipid particle size and number using nuclear magnetic resonance spectroscopy. Results: Women with PCOS had significantly higher body mass index and blood pressure but similar HDL-C and low-density lipoprotein cholesterol levels compared to controls. The mean ApoA1 levels were lower, and the ApoB/ApoA1 ratio was higher in PCOS subjects compared to controls (P < .01). There were no differences in ApoB levels. Women with PCOS had an 7% decrease in normalized cholesterol efflux capacity compared to controls (P < .003). Cholesterol efflux capacity in PCOS correlated with body mass index, ApoA1, HDL-C, and the presence of metabolic syndrome. In a multivariable regression model, PCOS was significantly associated with diminished cholesterol efflux. PCOS was also associated with an atherogenic profile including an increase in large very low-density lipoprotein particles, very low-density lipoprotein (VLDL) size, and small low-density lipoprotein cholesterol particles (P < .01). Conclusions: Our novel findings of decreased cholesterol efflux and an atherogenic lipid particle number and size pattern in women with PCOS, independent of obesity, further substantiate the increased risk of CVD in this population. PMID:24512495

Different efflux rates may determine the cellular accumulation of various bis(guanylhydrazones).

PubMed Central

Alhonen-Hongisto, L; Fagerström, R; Laine, R; Elo, H; Jänne, J

1984-01-01

Three bis(guanylhydrazones) (those of methylglyoxal, glyoxal and ethylglyoxal) were compared for their affinity for the putative polyamine carrier and for their cellular retention in L1210 mouse leukaemia cells. All the bis(guanylhydrazones) inhibited equally effectively the uptake of spermidine by the tumour cells, indicating that the compounds had roughly equal affinity for the polyamine carrier. The fact that methylglyoxal bis(guanylhydrazone) and glyoxal bis(guanylhydrazone) were much more effectively concentrated in the animal cells than was ethylglyoxal bis(guanylhydrazone) was obviously attributable to the finding that the efflux rate of ethylglyoxal bis(guanylhydrazone) greatly exceeded that of the other bis(guanylhydrazones). The rate of efflux of the drugs was slowed down if the tumour cells were treated with 2-difluoromethylornithine before exposure to the bis(guanylhydrazones). These results suggest that intracellular binding of the bis(guanylhydrazones) determines their cellular accumulation. PMID:6431972

The action of diazoxide and minoxidil sulphate on rat blood vessels: a comparison with cromakalim.

PubMed Central

Newgreen, D. T.; Bray, K. M.; McHarg, A. D.; Weston, A. H.; Duty, S.; Brown, B. S.; Kay, P. B.; Edwards, G.; Longmore, J.; Southerton, J. S.

1990-01-01

1. The actions of diazoxide and minoxidil sulphate have been compared with those of cromakalim in rat aorta and portal vein. 2. Diazoxide and minoxidil sulphate hyperpolarized the rat portal vein in a similar manner to cromakalim. 3. Cromakalim, diazoxide and minoxidil sulphate increased 42K and 86Rb efflux from rat portal vein, although minoxidil sulphate had only a small effect on 86Rb efflux. 4. Cromakalim, diazoxide and minoxidil sulphate increased 42K efflux from rat aorta but only cromakalim and diazoxide increased 86Rb efflux from this tissue. 5. Glibenclamide inhibited the relaxant actions of cromakalim, diazoxide and minoxidil sulphate on rat aorta and the increase in 42K efflux produced by these agents in this tissue. 6. Diazoxide relaxed an 80 mM KCl-induced contraction of rat aorta, whilst cromakalim and minoxidil sulphate were without effect. 7. Cromakalim, diazoxide and minoxidil sulphate had no effect on cyclic AMP or cyclic GMP concentrations in rat aorta. 8. It is concluded that diazoxide and minoxidil sulphate like cromakalim exhibit K+ channel opening properties in vascular smooth muscle. Diazoxide exerts an additional inhibitory action not related to the production of cyclic AMP or cyclic GMP. The action of minoxidil sulphate may be primarily located at a K+ channel which is relatively impermeable to 86Rb. PMID:2167738

Chloride fluxes in crab muscle fibres

PubMed Central

Richards, C. D.

1969-01-01

1. Isotopic techniques were used to study the efflux of Cl- from single cannulated muscle fibres of the crab Maia squinado. 2. The efflux of 36Cl- was found to be exponential with steady rate constants ranging from 0·01 to 0·07 min-1. The steady efflux was ca. 1000-2000 pM cm-2 sec-1. The efflux was slightly depressed by K+-free saline and was unaffected by 40 mM-K+ saline and NO3- saline. The influx and efflux of Cl- were presumed independent. 3. The membrane conductance calculated from 36Cl- flux data was consistent with that determined by the method of electrotonic spread for other marine crustacean muscle fibres. Cl- accounted for most of the membrane conductance. PMID:5770889

Aquaporins and membrane diffusion of CO2 in living organisms.

PubMed

Kaldenhoff, Ralf; Kai, Lei; Uehlein, Norbert

2014-05-01

Determination of CO2 diffusion rates in living cells revealed inconsistencies with existing models about the mechanisms of membrane gas transport. Mainly, these discrepancies exist in the determined CO2 diffusion rates of bio-membranes, which were orders of magnitudes below those for pure lipid bilayers or theoretical considerations as well as in the observation that membrane insertion of specific aquaporins was rescuing high CO2 transport rates. This effect was confirmed by functional aquaporin protein analysis in heterologous expression systems as well as in bacteria, plants and partly in mammals. This review summarizes the arguments in favor of and against aquaporin facilitated membrane diffusion of CO2 and reports about its importance for the physiology of living organisms. Most likely, the aquaporin tetramer forming an additional fifth pore is required for CO2 diffusion facilitation. Aquaporin tetramer formation, membrane integration and disintegration could provide a mechanism for regulation of cellular CO2 exchange. The physiological importance of aquaporin mediated CO2 membrane diffusion could be shown for plants and cyanobacteria and partly for mammals. Taking the mentioned results into account, consequences for our current picture of cell membrane transport emerge. It appears that in some or many instances, membranes might not be as permeable as it was suggested by current bio-membrane models, opening an additional way of controlling the cellular influx or efflux of volatile substances like CO2. This article is part of a Special Issue entitled Aquaporins. © 2013.

Evaluation of the tannic acid inhibitory effect against the NorA efflux pump of Staphylococcus aureus.

PubMed

Tintino, Saulo R; Oliveira-Tintino, Cícera D M; Campina, Fábia F; Silva, Raimundo L P; Costa, Maria do S; Menezes, Irwin R A; Calixto-Júnior, João T; Siqueira-Junior, José P; Coutinho, Henrique D M; Leal-Balbino, Tereza C; Balbino, Valdir Q

2016-08-01

During the early periods of antibiotic usage, bacterial infections were considered tamed. However, widespread antibiotic use has promoted the emergence of antibiotic-resistant pathogens, including multidrug resistant strains. Active efflux is a mechanism for bacterial resistance to inhibitory substances, known simply as drug efflux pumps. The bacterium Staphylococcus aureus is an important pathogenic bacterium responsible for an array of infections. The NorA efflux pump has been shown to be responsible for moderate fluoroquinolone resistance of S. aureus. The inhibition of the efflux pump was assayed using a sub-inhibitory concentration of standard efflux pump inhibitors and tannic acid (MIC/8), where its capacity to decrease the MIC of Ethidium bromide (EtBr) and antibiotics due to the possible inhibitory effect of these substances was observed. The MICs of EtBr and antibiotics were significantly reduced in the presence of tannic acid, indicating the inhibitory effect of this agent against the efflux pumps of both strains causing a three-fold reduction of the MIC when compared with the control. These results indicate the possible usage of tannic acid as an adjuvant in antibiotic therapy against multidrug resistant bacteria (MDR). Copyright © 2016 Elsevier Ltd. All rights reserved.

[Effect of NaHCO3 stress on uptake and transportation of Na+, K+ and Ca2+ in three shrub species].

PubMed

Mao, Gui-Lian; Li, Guo-Qi; Xu, Xing; Zhang, Xin-Xue

2014-03-01

We detected absorption and transportation of ions in the leaves of Atriplex nummularia, Atriplex canescens and Lycium barbarum under NaHCO3 stress (300 mmol x L(-1)) by using atomic absorption spectrophotometry and non-invasive ion flux measurement. The results showed that leaves of the A. nummularia, A. canescens and L. barbarum exhibited a high capacity to induce the Na+ accumulation when compared with that of control. The higher the concentration of NaHCO3 treatment, the more Na+ accumulated in the leaves of the three plants under experimental condition. L. barbarum showed a higher Na+ efflux in the mesophyll cells, whereas A. nummularia and A. canescens showed a relative lower efflux. A lower K+ content and a higher Na+/K+ ratio were detected in leaves of A. nummularia and L. barbarum. However, a higher K+ content and a lower Na+/K+ ratio were seen in leaves of A. canescens. Due to induction of Ca2+ efflux under the NaHCO3 treatment, a lower Ca2+ content and a higher Na+/Ca2+ ratio were observed in L. barbarum. On the contrary, a higher Ca2+ influx was observed in A. nummularia and A. canescens. These results suggested that the three shrubs species had different Na+ segmentation strategies. The accumulation of Na+ inhibited Ca2+ absorption in leaves of L. barbarum, while in the A. nummularia and A. canescens, Ca2+ influx induced [Ca2+]cyt which preserved a less-depolarized PM and then inhibited K efflux. The maintaining of cellular K+/Na+ homeostasis in A. nummularia and A. canescens might be achieved by the induction of [Ca2+]cyt under the NaHCO3 treatment.

Differential effect of imipramine and related compounds on Mg2+ efflux from rat erythrocytes.

PubMed

Ebel, H; Hollstein, M; Günther, T

2004-12-15

The effect of imipramine on Mg2+ efflux in NaCl medium (Na+/Mg2+ antiport), on Mg2+ efflux in choline.Cl medium (choline/Mg2+ antiport) and on Mg2+ efflux in sucrose medium (Cl- -coupled Mg2+ efflux) was investigated in rat erythrocytes. In non-Mg2+-loaded rat erythrocytes, imipramine stimulated Na+/Mg2+ antiport but inhibited choline/Mg2+ antiport and Cl- -coupled Mg2+ efflux. The same effect could be obtained by several other compounds structurally related to imipramine. These drugs contain a cyclic hydrophobic ring structure to which a four-membered secondary or tertiary amine side chain is attached. At a physiological pH, the amine side chain expresses a cationic choline-like structure. The inhibitory effect on choline/Mg2+ antiport is lost when the amine side chain is modified or abandoned, pointing to competition of the choline-like side chain with choline or another cation at the unspecific choline antiporter or at the Cl- -coupled Mg2+ efflux. Other related drugs either stimulated Na+/Mg2+ antiport and choline/Mg2+ antiport, or they were ineffective. For stimulation of Na+/Mg2+ antiport and choline/Mg2+ antiport, there is no specific common structural motif of the drugs tested. The effects of imipramine on Na+/Mg2+ antiport and choline/Mg2+ antiport are not mediated by PKCalpha but are caused by a direct reaction of imipramine with these transporters. By increasing the intracellular Mg2+ concentration, the stimulation of Na+/Mg2+ antiport at a physiological intracellular Mg2+ concentration changed to an inhibition of Na+/Mg2+ antiport. This effect can be explained by the hypothesis that Mg2+ loading induced an allosteric transition of the Mg2+/Mg2+ exchanger with low Na+/Mg2+ antiport capacity to the Na+/Mg2+ antiporter with high Na+/Mg2+ antiport capacity. Both forms of the Mg2+ exchanger may be differently affected by imipramine.

Flow enhances photosynthesis in marine benthic autotrophs by increasing the efflux of oxygen from the organism to the water

PubMed Central

Mass, Tali; Genin, Amatzia; Shavit, Uri; Grinstein, Mor; Tchernov, Dan

2010-01-01

Worldwide, many marine coastal habitats are facing rapid deterioration due in part to human-driven changes in habitat characteristics, including changes in flow patterns, a factor known to greatly affect primary production in corals, algae, and seagrasses. The effect of flow traditionally is attributed to enhanced influx of nutrients and dissolved inorganic carbon (DIC) across the benthic boundary layer from the water to the organism however, here we report that the organism’s photosynthetic response to changes in the flow is nearly instantaneous, and that neither nutrients nor DIC limits this rapid response. Using microelectrodes, dual-pulse amplitude-modulated fluorometry, particle image velocimetry, and real time mass-spectrometry with the common scleractinian coral Favia veroni, the alga Gracilaria cornea, and the seagrass Halophila stipulacea, we show that this augmented photosynthesis is due to flow-driven enhancement of oxygen efflux from the organism to the water, which increases the affinity of the RuBisCO to CO2. No augmentation of photosynthesis was found in the absence of flow or when flow occurred, but the ambient concentration of oxygen was artificially elevated. We suggest that water motion should be considered a fundamental factor, equivalent to light and nutrients, in determining photosynthesis rates in marine benthic autotrophs. PMID:20133799

Flow enhances photosynthesis in marine benthic autotrophs by increasing the efflux of oxygen from the organism to the water.

PubMed

Mass, Tali; Genin, Amatzia; Shavit, Uri; Grinstein, Mor; Tchernov, Dan

2010-02-09

Worldwide, many marine coastal habitats are facing rapid deterioration due in part to human-driven changes in habitat characteristics, including changes in flow patterns, a factor known to greatly affect primary production in corals, algae, and seagrasses. The effect of flow traditionally is attributed to enhanced influx of nutrients and dissolved inorganic carbon (DIC) across the benthic boundary layer from the water to the organism however, here we report that the organism's photosynthetic response to changes in the flow is nearly instantaneous, and that neither nutrients nor DIC limits this rapid response. Using microelectrodes, dual-pulse amplitude-modulated fluorometry, particle image velocimetry, and real time mass-spectrometry with the common scleractinian coral Favia veroni, the alga Gracilaria cornea, and the seagrass Halophila stipulacea, we show that this augmented photosynthesis is due to flow-driven enhancement of oxygen efflux from the organism to the water, which increases the affinity of the RuBisCO to CO(2). No augmentation of photosynthesis was found in the absence of flow or when flow occurred, but the ambient concentration of oxygen was artificially elevated. We suggest that water motion should be considered a fundamental factor, equivalent to light and nutrients, in determining photosynthesis rates in marine benthic autotrophs.

Abiotic and seasonal control of soil-produced CO2 efflux in karstic ecosystems located in Oceanic and Mediterranean climates

NASA Astrophysics Data System (ADS)

Garcia-Anton, Elena; Cuezva, Soledad; Fernandez-Cortes, Angel; Alvarez-Gallego, Miriam; Pla, Concepcion; Benavente, David; Cañaveras, Juan Carlos; Sanchez-Moral, Sergio

2017-09-01

This study characterizes the processes involved in seasonal CO2 exchange between soils and shallow underground systems and explores the contribution of the different biotic and abiotic sources as a function of changing weather conditions. We spatially and temporally investigated five karstic caves across the Iberian Peninsula, which presented different microclimatic, geologic and geomorphologic features. The locations present Mediterranean and Oceanic climates. Spot air sampling of CO2 (g) and δ13CO2 in the caves, soils and outside atmospheric air was periodically conducted. The isotopic ratio of the source contribution enhancing the CO2 concentration was calculated using the Keeling model. We compared the isotopic ratio of the source in the soil (δ13Cs-soil) with that in the soil-underground system (δ13Cs-system). Although the studied field sites have different features, we found common seasonal trends in their values, which suggests a climatic control over the soil air CO2 and the δ13CO2 of the sources of CO2 in the soil (δ13Cs-soil) and the system (δ13Cs-system). The roots respiration and soil organic matter degradation are the main source of CO2 in underground environments, and the inlet of the gas is mainly driven by diffusion and advection. Drier and warmer conditions enhance soil-exterior CO2 interchange, reducing the CO2 concentration and increasing the δ13CO2 of the soil air. Moreover, the isotopic ratio of the source of CO2 in both the soil and the system tends to heavier values throughout the dry and warm season. We conclude that seasonal variations of soil CO2 concentration and its 13C/12C isotopic ratio are mainly regulated by thermo-hygrometric conditions. In cold and wet seasons, the increase of soil moisture reduces soil diffusivity and allows the storage of CO2 in the subsoil. During dry and warm seasons, the evaporation of soil water favours diffusive and advective transport of soil-derived CO2 to the atmosphere. The soil CO2 diffusion is enough important during this season to modify the isotopic ratio of soil produced CO2 (3-6‰ heavier). Drought induces release of CO2 with an isotopic ratio heavier than produced by organic sources. Consequently, climatic conditions drive abiotic processes that turn regulate a seasonal storage of soil-produced CO2 within soil and underground systems. The results here obtained imply that abiotic emissions of soil-produced CO2 must be an inherent consequence of droughts, which intensification has been forecasted at global scale in the next 100 years.

Effect of proinflammatory cytokine IL-6 on efflux transport of rebamipide in Caco-2 cells.

PubMed

Miyake, Masateru; Nakai, Daisuke

2017-09-01

1. Effect of IL-6, a pro-inflammatory cytokine, on efflux transport of rebamipide, an antiulcer drug, was investigated in Caco-2 cells. 2. Rebamipide had a greater basal-to-apical than apical-to-basal transport rate. Efflux transport of rebamipide was inhibited by cyclosporine A, a P-gp inhibitor, and probenecid, which is a general MRP inhibitor, but not by Ko143, a BCRP inhibitor. 3. By the addition of IL-6, mannitol transport was slightly increased in a concentration-dependent manner in both directions of absorption and efflux. The addition of IL-6 did not change efflux transport of rebamipide even though efflux transport of digoxin, a typical substrate of P-gp, was significantly decreased by the addition of IL-6, indicating decrease of the function of P-gp. 4. Therefore, it was suggested that increase of MRP(s)-mediated transport compensates for the decrease of P-gp mediated transport of rebamipide. These findings suggested that rebamipide absorption is unlikely to be changed in IBD patients.

Effects of salicylic acid on post-ischaemic ventricular function and purine efflux in isolated mouse hearts.

PubMed

Farthing, Don; Gehr, Lynne; Karnes, H Thomas; Sica, Domenic; Gehr, Todd; Larus, Terri; Farthing, Christine; Xi, Lei

2007-01-01

Acetyl salicylic acid (aspirin) is one of the most widely used drugs in the world. Various plasma concentrations of aspirin and its predominant metabolite, salicylic acid, are required for its antiarthritic (1.5-2.5 mM), anti-inflammatory (0.5-5.0 mM) or antiplatelet (0.18-0.36 mM) actions. A recent study demonstrated the inhibitory effects of both aspirin and salicylic acid on oxidative phosphorylation and ATP synthesis in isolated rat cardiac mitochondria in a dose-dependent manner (0-10 mM concentration range). In this context, the present study was conducted to determine the effects of salicylic acid on inosine efflux (a potential biomarker of acute cardiac ischaemia) as well as cardiac contractile function in the isolated mouse heart following 20 min of zero-flow global ischaemia. Inosine efflux was found at significantly higher concentrations in ischaemic hearts perfused with Krebs buffer fortified with 1.0 mM salicylic acid compared with those without salicylic acid (12575+/-3319 vs. 1437+/-348 ng ml(-1) min(-1), mean+/-SEM, n=6 per group, p<0.01). These results indicate that 1.0 mM salicylic acid potentiates 8.8-fold ATP nucleotide purine catabolism into its metabolites (e.g. inosine, hypoxanthine). Salicylic acid (0.1 or 1.0 mM) did not appreciably inhibit purine nucleoside phosphorylase (the enzyme converts inosine to hypoxanthine) suggesting the augmented inosine efflux was due to the salicylic acid effect on upstream elements of cellular respiration. Whereas post-ischaemic cardiac function was further depressed by 1.0 mM salicylic acid, perfusion with 0.1 mM salicylic acid led to a remarkable functional improvement despite moderately increased inosine efflux (2.7-fold). We conclude that inosine is a sensitive biomarker for detecting cardiac ischaemia and salicylic acid-induced effects on cellular respiration. However, the inosine efflux level appears to be a poor predictor of the individual post-ischaemic cardiac functional recovery in this ex vivo model.

Processes regulating progressive nitrogen limitation under elevated carbon dioxide: a meta-analysis

NASA Astrophysics Data System (ADS)

Liang, J.; Qi, X.; Souza, L.; Luo, Y.

2015-10-01

Nitrogen (N) cycle has the potential to regulate climate change through its influence on carbon (C) sequestration. Although extensive researches have been done to explore whether or not progressive N limitation (PNL) occurs under CO2 enrichment, a comprehensive assessment of the processes that regulate PNL is still lacking. Here, we quantitatively synthesized the responses of all major processes and pools in terrestrial N cycle with meta-analysis of CO2 experimental data available in the literature. The results showed that CO2 enrichment significantly increased N sequestration in plant and litter pools but not in soil pool. Thus, the basis of PNL occurrence partially exists. However, CO2 enrichment also significantly increased the N influx via biological N fixation, but decreased the N efflux via leaching. In addition, no general diminished CO2 fertilization effect on plant growth over time was observed. Overall, our analyses suggest that the extra N supply by the increased biological N fixation and decreased leaching may potentially alleviate PNL under elevated CO2 conditions. Moreover, our synthesis showed that CO2 enrichment increased soil ammonium (NH4+) but decreased nitrate (NO3-). The different responses of NH4+ and NO3-, and the consequent biological processes, may result in changes in soil microenvironment, community structures and above-belowground interactions, which could potentially affect the terrestrial biogeochemical cycles and the feedback to climate change.

Soil moisture surpasses elevated CO2 and temperature as a control on soil carbon dynamics in a multi-factor climate change experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garten Jr, Charles T; Classen, Aimee T; Norby, Richard J

2009-01-01

Some single-factor experiments suggest that elevated CO2 concentrations can increase soil carbon, but few experiments have examined the effects of interacting environmental factors on soil carbon dynamics. We undertook studies of soil carbon and nitrogen in a multi-factor (CO2 x temperature x soil moisture) climate change experiment on a constructed old-field ecosystem. After four growing seasons, elevated CO2 had no measurable effect on carbon and nitrogen concentrations in whole soil, particulate organic matter (POM), and mineral-associated organic matter (MOM). Analysis of stable carbon isotopes, under elevated CO2, indicated between 14 and 19% new soil carbon under two different watering treatmentsmore » with as much as 48% new carbon in POM. Despite significant belowground inputs of new organic matter, soil carbon concentrations and stocks in POM declined over four years under soil moisture conditions that corresponded to prevailing precipitation inputs (1,300 mm yr-1). Changes over time in soil carbon and nitrogen under a drought treatment (approximately 20% lower soil water content) were not statistically significant. Reduced soil moisture lowered soil CO2 efflux and slowed soil carbon cycling in the POM pool. In this experiment, soil moisture (produced by different watering treatments) was more important than elevated CO2 and temperature as a control on soil carbon dynamics.« less

NorA efflux pump inhibitory activity of coumarins from Mesua ferrea.

PubMed

Roy, Somendu K; Kumari, Neela; Pahwa, Sonika; Agrahari, Udai C; Bhutani, Kamlesh K; Jachak, Sanjay M; Nandanwar, Hemraj

2013-10-01

The purpose of this investigation was to study the modulator and efflux pump inhibitor activity of coumarins isolated from Mesua ferrea against clinical strains as well as NorA-over expressed strain of Staphylococcus aureus 1199B. Seven coumarins were tested for modulator activity using ethidium bromide (EtBr) as a substrate. Compounds 1, 4-7 modulated the MIC of EtBr by ≥ 2 fold against wild type clinical strains of S. aureus 1199 and S. aureus 1199B, whereas compounds 4-7 modulated the MIC of EtBr by ≥ 16 fold against MRSA 831. Compounds 1, 4-7 also reduced the MIC of norfloxacin by ≥ 8 fold against S. aureus 1199B, and 4-6 reduced the MIC of norfloxacin by ≥ 8 fold against MRSA 831 at half of their MICs. Inhibition of EtBr efflux by NorA-overproducing S. aureus 1199B and MRSA 831 confirmed the role of compounds 4-6 as NorA efflux pump inhibitors (EPI). Dose-dependent activity at sub-inhibitory concentration (6.25 μg/mL) suggested that compounds 4 and 5 are promising EPI compared to verapamil against 1199B and MRSA 831 strains. © 2013.

Proteoglycan 4 regulates macrophage function without altering atherosclerotic lesion formation in a murine bone marrow-specific deletion model.

PubMed

Nahon, Joya E; Hoekstra, Menno; Havik, Stefan R; Van Santbrink, Peter J; Dallinga-Thie, Geesje M; Kuivenhoven, Jan-Albert; Geerling, Janine J; Van Eck, Miranda

2018-05-05

Proteoglycan 4 (Prg4) has a high structural similarity with the established atherosclerosis-modulating proteoglycan versican, but its role in atherogenesis is still unknown. Therefore, the impact of Prg4 deficiency on macrophage function in vitro and atherosclerosis susceptibility in vivo was investigated. The presence and localization of Prg4 was studied in atherosclerotic lesions. Furthermore, the effect of Prg4 deficiency on macrophage foam cell formation, cholesterol efflux and lipopolysaccharide (LPS) response was determined. Finally, susceptibility for atherosclerotic lesion formation was investigated in bone marrow-specific Prg4 knockout (KO) mice. Prg4 mRNA expression was induced 91-fold (p<0.001) in murine initial atherosclerotic lesions and Prg4 protein co-localized with human lesional macrophages. Murine Prg4 KO macrophages showed increased foam cell formation (+2.1-fold, p<0.01). In parallel, the expression of the cholesterol efflux genes ATP-binding cassette transporter A1 and scavenger receptor type B1 was lower (-35%, p<0.05;-40%, p<0.05) in Prg4 KO macrophages. This translated into an impaired cholesterol efflux to high-density lipoprotein (-13%, p<0.001) and apolipoprotein A1 (-8%, p<0.05). Furthermore, Prg4 KO macrophages showed an impaired LPS-induced rise in TNFα secretion as compared to wild-type controls (-31%, p<0.001), indicating a reduced inflammatory response. Combined, these pro- and anti-atherogenic effects did not translate into a significant difference in atherosclerotic lesion formation upon bone marrow-specific deletion of Prg4 in low-density lipoprotein receptor KO mice. Prg4 is present in macrophages in both murine and human atherosclerotic lesions and critically influences macrophage function, but deletion of Prg4 in bone marrow-derived cells does not affect atherosclerotic lesion development. Copyright © 2018 Elsevier B.V. All rights reserved.

Intracellular pH Regulation in Cultured Astrocytes from Rat Hippocampus

PubMed Central

Bevensee, Mark O.; Apkon, Michael; Boron, Walter F.

1997-01-01

In the preceding paper (Bevensee, M.O., R.A. Weed, and W.F. Boron. 1997. J. Gen. Physiol. 110: 453–465.), we showed that a Na+-driven influx of HCO3 − causes the increase in intracellular pH (pHi) observed when astrocytes cultured from rat hippocampus are exposed to 5% CO2/17 mM HCO3 −. In the present study, we used the pH-sensitive fluorescent indicator 2′,7′-biscarboxyethyl-5,6-carboxyfluorescein (BCECF) and the perforated patch-clamp technique to determine whether this transporter is a Na+-driven Cl-HCO3 exchanger, an electrogenic Na/HCO3 cotransporter, or an electroneutral Na/HCO3 cotransporter. To determine if the transporter is a Na+-driven Cl-HCO3 exchanger, we depleted the cells of intracellular Cl− by incubating them in a Cl−-free solution for an average of ∼11 min. We verified the depletion with the Cl−-sensitive dye N-(6-methoxyquinolyl)acetoethyl ester (MQAE). In Cl−-depleted cells, the pHi still increases after one or more exposures to CO2/HCO3 −. Furthermore, the pHi decrease elicited by external Na+ removal does not require external Cl−. Therefore, the transporter cannot be a Na+-driven Cl-HCO3 exchanger. To determine if the transporter is an electrogenic Na/ HCO3 cotransporter, we measured pHi and plasma membrane voltage (Vm) while removing external Na+, in the presence/absence of CO2/HCO3 − and in the presence/absence of 400 μM 4,4′-diisothiocyanatostilbene-2,2′-disulphonic acid (DIDS). The CO2/HCO3 − solutions contained 20% CO2 and 68 mM HCO3 −, pH 7.3, to maximize the HCO3 − flux. In pHi experiments, removing external Na+ in the presence of CO2/HCO3 − elicited an equivalent HCO3 − efflux of 281 μM s−1. The HCO3 − influx elicited by returning external Na+ was inhibited 63% by DIDS, so that the predicted DIDS-sensitive Vm change was 3.3 mV. Indeed, we found that removing external Na+ elicited a DIDS-sensitive depolarization that was 2.6 mV larger in the presence than in the absence of CO2/ HCO3 −. Thus, the Na/HCO3 cotransporter is electrogenic. Because a cotransporter with a Na+:HCO3 − stoichiometry of 1:3 or higher would predict a net HCO3 − efflux, rather than the required influx, we conclude that rat hippocampal astrocytes have an electrogenic Na/HCO3 cotransporter with a stoichiometry of 1:2. PMID:9379176

Interplay between three RND efflux pumps in doxycycline-selected strains of Burkholderia thailandensis.

PubMed

Biot, Fabrice Vincent; Lopez, Mélanie Monique; Poyot, Thomas; Neulat-Ripoll, Fabienne; Lignon, Sabrina; Caclard, Arnaud; Thibault, François Michel; Peinnequin, Andre; Pagès, Jean-Marie; Valade, Eric

2013-01-01

Efflux systems are involved in multidrug resistance in most Gram-negative non-fermentative bacteria. We have chosen Burkholderia thailandensis to dissect the development of multidrug resistance phenotypes under antibiotic pressure. We used doxycycline selection to obtain several resistant B. thailandensis variants. The minimal inhibitory concentrations of a large panel of structurally unrelated antibiotics were determined ± the efflux pump inhibitor phenylalanine-arginine ß-naphthylamide (PAßN). Membrane proteins were identified by proteomic method and the expressions of major efflux pumps in the doxycycline selected variants were compared to those of the parental strains by a quantitative RT-PCR analysis. Doxycycline selected variants showed a multidrug resistance in two major levels corresponding to the overproduction of two efflux pumps depending on its concentration: AmrAB-OprA and BpeEF-OprC. The study of two mutants, each lacking one of these pumps, indicated that a third pump, BpeAB-OprB, could substitute for the defective pump. Surprisingly, we observed antagonistic effects between PAßN and aminoglycosides or some ß-lactams. PAßN induced the overexpression of AmrAB-OprA and BpeAB-OprB pump genes, generating this unexpected effect. These results may account for the weak activity of PAßN in some Gram-negative species. We clearly demonstrated two antagonistic effects of this molecule on bacterial cells: the blocking of antibiotic efflux and an increase in efflux pump gene expression. Thus, doxycycline is a very efficient RND efflux pump inducer and PAßN may promote the production of some efflux pumps. These results should be taken into account when considering antibiotic treatments and in future studies on efflux pump inhibitors.

Pharmacokinetic Assessment of Cooperative Efflux of the Multitargeted Kinase Inhibitor Ponatinib Across the Blood-Brain Barrier.

PubMed

Laramy, Janice K; Kim, Minjee; Parrish, Karen E; Sarkaria, Jann N; Elmquist, William F

2018-05-01

A compartmental blood-brain barrier (BBB) model describing drug transport across the BBB was implemented to evaluate the influence of efflux transporters on the rate and extent of the multikinase inhibitor ponatinib penetration across the BBB. In vivo pharmacokinetic studies in wild-type and transporter knockout mice showed that two major BBB efflux transporters, P-glycoprotein (P-gp) and breast cancer resistance protein (Bcrp), cooperate to modulate the brain exposure of ponatinib. The total and unbound (free) brain-to-plasma ratios were approximately 15-fold higher in the triple knockout mice lacking both P-gp and Bcrp [ Mdr1a/b(-/-)Bcrp1(-/-) ] compared with the wild-type mice. The triple knockout mice had a greater than an additive increase in the brain exposure of ponatinib when compared with single knockout mice [ Bcrp1(-/-) or Mdr1a/b(-/-) ], suggesting functional compensation of transporter-mediated drug efflux. Based on the BBB model characterizing the observed brain and plasma concentration-time profiles, the brain exit rate constant and clearance out of the brain were approximately 15-fold higher in the wild-type compared with Mdr1a/b(-/-)Bcrp1(-/-) mice, resulting in a significant increase in the mean transit time (the average time spent by ponatinib in the brain in a single passage) in the absence of efflux transporters (P-gp and Bcrp). This study characterized transporter-mediated drug efflux from the brain, a process that reduces the duration and extent of ponatinib exposure in the brain and has critical implications for the use of targeted drug delivery for brain tumors. Copyright © 2018 by The American Society for Pharmacology and Experimental Therapeutics.

Detoxification of ivermectin by ATP binding cassette transporter C4 and cytochrome P450 monooxygenase 6CJ1 in the human body louse, Pediculus humanus humanus.

PubMed

Kim, J H; Gellatly, K J; Lueke, B; Kohler, M; Nauen, R; Murenzi, E; Yoon, K S; Clark, J M

2018-02-01

We previously observed that ivermectin-induced detoxification genes, including ATP binding cassette transporter C4 (PhABCC4) and cytochrome P450 6CJ1 (CYP6CJ1) were identified from body lice following a brief exposure to a sublethal dose of ivermectin using a non-invasive induction assay. In this current study, the functional properties of PhABCC4 and CYP6CJ1 were investigated after expression in either X. laevis oocytes or using a baculovirus expression system, respectively. Efflux of [ 3 H]-9-(2-phosphonomethoxyethyl) adenine ([ 3 H]-PMEA), a known ABCC4 substrate in humans, was detected from PhABCC4 cRNA-injected oocytes by liquid scintillation spectrophotometric analysis and PhABCC4 expression in oocytes was confirmed using ABC transporter inhibitors. Efflux was also determined to be ATP-dependent. Using a variety of insecticides in a competition assay, only co-injection of ivermectin and dichlorodiphenyltrichloroethane led to decreased efflux of [ 3 H]-PMEA. PhABCC4-expressing oocytes also directly effluxed [ 3 H]-ivermectin, which increased over time. In addition, ivermectin appeared to be oxidatively metabolized and/or sequestered, although at low levels, following functional expression of CYP6CJ1 along with cytochrome P450 reductase in Sf9 cells. Our study suggests that PhABCC4 and perhaps CYP6CJ1 are involved in the Phase III and Phase I xenobiotic metabolism of ivermectin, respectively, and may play an important role in the evolution of ivermectin resistance in lice and other insects as field selection occurs. © 2017 The Royal Entomological Society.

Variation in soil carbon dioxide efflux at two spatial scales in a topographically complex boreal forest

USGS Publications Warehouse

Kelsey, Katharine C.; Wickland, Kimberly P.; Striegl, Robert G.; Neff, Jason C.

2012-01-01

Carbon dynamics of high-latitude regions are an important and highly uncertain component of global carbon budgets, and efforts to constrain estimates of soil-atmosphere carbon exchange in these regions are contingent on accurate representations of spatial and temporal variability in carbon fluxes. This study explores spatial and temporal variability in soilatmosphere carbon dynamics at both fine and coarse spatial scales in a high-elevation, permafrost-dominated boreal black spruce forest. We evaluate the importance of landscape-level investigations of soil-atmosphere carbon dynamics by characterizing seasonal trends in soil-atmosphere carbon exchange, describing soil temperature-moisture-respiration relations, and quantifying temporal and spatial variability at two spatial scales: the plot scale (0–5 m) and the landscape scale (500–1000 m). Plot-scale spatial variability (average variation on a given measurement day) in soil CO2 efflux ranged from a coefficient of variation (CV) of 0.25 to 0.69, and plot-scale temporal variability (average variation of plots across measurement days) in efflux ranged from a CV of 0.19 to 0.36. Landscape-scale spatial and temporal variability in efflux was represented by a CV of 0.40 and 0.31, respectively, indicating that plot-scale spatial variability in soil respiration is as great as landscape-scale spatial variability at this site. While soil respiration was related to soil temperature at both the plot- and landscape scale, landscape-level descriptions of soil moisture were necessary to define soil respiration-moisture relations. Soil moisture variability was also integral to explaining temporal variability in soil respiration. Our results have important implications for research efforts in high-latitude regions where remote study sites make landscape-scale field campaigns challenging.

Metabolism of hydroxypyruvate in a mutant of barley lacking NADH-dependent hydroxypyruvate reductase, an important photorespiratory enzyme activity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murray, A.J.S.; Blackwell, R.D.; Lea, P.J.

1989-09-01

A mutant of barley (Hordeum vulgare L.), LaPr 88/29, deficient in NADH-dependent hydroxypyruvate reductase (HPR) activity has been isolated. The activities of both NADH (5%) and NADPH-dependent (19%) HPR were severely reduced in this mutant compared to the wild type. Although lacking an enzyme in the main carbon pathway of photorespiration, this mutant was capable of CO{sub 2} fixation rates equivalent to 75% of that of the wild type, in normal atmospheres and 50% O{sub 2}. There also appeared to be little disruption to the photorespiratory metabolism as ammonia release, CO{sub 2} efflux and {sup 14}CO{sub 2} release from L-(U-{supmore » 14}C)serine feeding were similar in both mutant and wild-type leaves. When leaves of LaPr 88/29 were fed either ({sup 14}C)serine or {sup 14}CO{sub 2}, the accumulation of radioactivity was in serine and not in hydroxypyruvate, although the mutant was still able to metabolize over 25% of the supplied ({sup 14}C)serine into sucrose. After 3 hours in air the soluble amino acid pool was almost totally dominated by serine and glycine. LaPr 88/29 has also been used to show that NADH-glyoxylate reductase and NADH-HPR are probably not catalyzed by the same enzyme in barley and that over 80% of the NADPH-dependent HPR activity is due to the NADH-dependent enzyme. We also suggest that the alternative NADPH activity can metabolize a proportion, but not all, of the hydroxypyruvate produced during photorespiration and may thus form a useful backup to the NADH-dependent enzyme under conditions of maximal photorespiration.« less

Suppression of Native Soil Organic Matter Decomposition by Post-Fermentation Sludge in Agriculture Soil as Assessed by 13C Natural Abundance

NASA Astrophysics Data System (ADS)

Stelmach, W.; Bieganowski, A.; Kuzyakov, Y.

2016-12-01

Anaerobic digestion of organic wastes results in the production of biogas and post-fermentation sludge. Post-fermentation sludge, which is rich in nutrients and contains more easily accessible inorganic-N than comparable composts, can be used as an alternative fertilizer in organic agriculture systems. While the effects of post fermentation sludge application on crop health and productivity have been extensively studied, little is known about its effects on soil parameters and long-term soil health. Thus, the main aim of this study was to determine the effects of post-fermentation sludge fertilization on agriculture soil quality. Specifically, it examined the efficiency and sequence of sludge utilisation by microorganisms and its influence on the utilisation/stabilization of native soil organic matter (SOM).To determine changes in SOM turnover after the addition of sludge, we utilized a natural stable carbon isotope labelling approach. Sludge produced from C4 plant residues (e.g. maize) was applied to soil under C3 cropping, resulting in distinct stable isotope signatures of fertilizer and SOM. Measuring the carbon isotope composition of CO2 produced in this microcosm experiment permitted accurate determination of the proportion of CO2 fluxes arising from both C sources. The addition of post-fermentation sludge increased the CO2 emissions from the soil by 30%. δ13C analysis of the total CO2 efflux revealed that post-fermentation sludge decreased SOM decomposition by 42% compared to control. Only 34% of the post-fermentation sludge had been mineralized after two months of incubation in the soil.The collective results of our study reveal that application of post-fermentation sludge suppresses SOM decomposition, suggesting its use as a fertilizer could positively influence long-term soil quality. Finally, the success of the natural abundance microcosm labeling approach in our study supports its use as an effective method of analyzing the effects of various fertilization techniques on soil nutrient retention.

In vitro activity of levofloxacin against planktonic and biofilm Stenotrophomonas maltophilia lifestyles under conditions relevant to pulmonary infection in cystic fibrosis, and relationship with SmeDEF multidrug efflux pump expression.

PubMed

Pompilio, Arianna; Crocetta, Valentina; Verginelli, Fabio; Di Bonaventura, Giovanni

2016-07-01

The activity of levofloxacin against planktonic and biofilm Stenotrophomonas maltophilia cells and the role played by the multidrug efflux pump SmeDEF were evaluated under conditions relevant to the cystic fibrosis (CF) lung. MIC, MBC and MBEC of levofloxacin were assessed, against five CF strains, under 'standard' (CLSI-recommended) and 'CF-like' (pH 6.8, 5% CO2, in a synthetic CF sputum) conditions. Levofloxacin was tested against biofilms at concentrations (10, 50 and 100 μg mL(-1)) corresponding to achievable serum levels and sputum levels by aerosolisation. smeD expression was evaluated, under both conditions, in planktonic and biofilm cells by RT-PCR. The bactericidal effect of levofloxacin was decreased, in three out of five strains tested, under 'CF-like' conditions (MBC: 2-4 vs 8-16 μg mL(-1), under 'standard' and 'CF-like' conditions, respectively). Biofilm was intrinsically resistant to levofloxacin, regardless of conditions tested (MBECs ≥ 100 μg mL(-1) for all strains). Only under 'CF-like' conditions, smeD expression increased during planktonic-to-biofilm transition, and in biofilm cells compared to stationary planktonic cells. Our findings confirmed that S. maltophilia biofilm is intrinsically resistant to therapeutic concentrations of levofloxacin. Under conditions relevant to CF, smeD overexpression could contribute to levofloxacin resistance. Further studies are warranted to define the clinical relevance of our findings. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Temporal and spatial patterns of internal and external stem CO2 fluxes in a sub-Mediterranean oak.

PubMed

Salomón, Roberto L; Valbuena-Carabaña, María; Gil, Luis; McGuire, Mary Anne; Teskey, Robert O; Aubrey, Doug P; González-Doncel, Inés; Rodríguez-Calcerrada, Jesús

2016-11-01

To accurately estimate stem respiration (R S ), measurements of both carbon dioxide (CO 2 ) efflux to the atmosphere (E A ) and internal CO 2 flux through xylem (F T ) are needed because xylem sap transports respired CO 2 upward. However, reports of seasonal dynamics of F T and E A are scarce and no studies exist in Mediterranean species under drought stress conditions. Internal and external CO 2 fluxes at three stem heights, together with radial stem growth, temperature, sap flow and shoot water potential, were measured in Quercus pyrenaica Willd. in four measurement campaigns during one growing season. Substantial daytime depressions in temperature-normalized E A were observed throughout the experiment, including prior to budburst, indicating that diel hysteresis between stem temperature and E A cannot be uniquely ascribed to diversion of CO 2 in the transpiration stream. Low internal [CO 2 ] (<0.5%) resulted in low contributions of F T to R S throughout the growing season, and R S was mainly explained by E A (>90%). Internal [CO 2 ] was found to vary vertically along the stems. Seasonality in resistance to radial CO 2 diffusion was related to shoot water potential. The low internal [CO 2 ] and F T observed in our study may result from the downregulation of xylem respiration in response to a legacy of coppicing as well as high radial diffusion of CO 2 through cambium, phloem and bark tissues, which was related to low water content of stems. Long-term studies analyzing temporal and spatial variation in internal and external CO 2 fluxes and their interactions are needed to mechanistically understand and model respiration of woody tissues. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Ventral tegmental ionotropic glutamate receptor stimulation of nucleus accumbens tonic dopamine efflux blunts hindbrain-evoked phasic neurotransmission: implications for dopamine dysregulation disorders.

PubMed

Tye, S J; Miller, A D; Blaha, C D

2013-11-12

Activation of glutamate receptors within the ventral tegmental area (VTA) stimulates extrasynaptic (basal) dopamine release in terminal regions, including the nucleus accumbens (NAc). Hindbrain inputs from the laterodorsal tegmental nucleus (LDT) are critical for elicitation of phasic VTA dopamine cell activity and consequent transient dopamine release. This study investigated the role of VTA ionotropic glutamate receptor (iGluR) stimulation on both basal and LDT electrical stimulation-evoked dopamine efflux in the NAc using in vivo chronoamperometry and fixed potential amperometry in combination with stearate-graphite paste and carbon fiber electrodes, respectively. Intra-VTA infusion of the iGluR agonists (±)-α-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid (AMPA; 1 μg/μl) or N-methyl-d-aspartic acid (NMDA; 2 μg/μl) enhanced basal NAc dopamine efflux. This iGluR-mediated potentiation of basal dopamine efflux was paralleled by an attenuation of LDT-evoked transient NAc dopamine efflux, suggesting that excitation of basal activity effectively inhibited the capacity of hindbrain afferents to elicit transient dopamine efflux. In line with this, post-NMDA infusion of the dopamine D2 autoreceptor (D2R) agonist quinpirole (1 μg/μl; intra-VTA) partially recovered NMDA-mediated attenuation of LDT-evoked NAc dopamine, while concurrently attenuating NMDA-mediated potentiation of basal dopamine efflux. Post-NMDA infusion of quinpirole (1 μg/μl) alone attenuated basal and LDT-evoked dopamine efflux. Taken together, these data reveal that hyperstimulation of basal dopamine transmission can stunt hindbrain burst-like stimulation-evoked dopamine efflux. Inhibitory autoreceptor mechanisms within the VTA help to partially recover the magnitude of phasic dopamine efflux, highlighting the importance of both iGluRs and D2 autoreceptors in maintaining the functional balance of tonic and phasic dopamine neurotransmission. Dysregulation of this balance may have important implications for disorders of dopamine dysregulation such as attention deficit hyperactivity disorder. Copyright © 2013 IBRO. Published by Elsevier Ltd. All rights reserved.

Emodin As an Effective Agent in Targeting Cancer Stem-Like Side Population Cells of Gallbladder Carcinoma

PubMed Central

Li, Xin-xing; Dong, Ying; Wang, Wei; Wang, Hao-lu; Chen, Yu-ying; Shi, Gui-ying; Yi, Jing

2013-01-01

Side population (SP) cells are previously identified from bone marrow based on their capacity to efflux of the fluorescent dye Hoechst 33342. Recent studies demonstrate that SP cells isolated from various cancer cell lines and primary tumors possess stem-cell-like properties. Thus, targeting tumor SP cells may provide new strategies for treatment in clinic. We previously showed that 1,3,8-trihydroxy-6-methylanthraquinone (emodin), a reactive oxygen species (ROS) generator, enhanced sensitivity of gallbladder cancer SGC-996 cells to cisplatin (CDDP) via generation of ROS and downregulation of multidrug-resistance-associated protein 1 (MRP1). To determine whether emodin also acts effectively on cancer stem cells of gallbladder carcinoma, we use SP cells as a model of cancer stem-cell-like cells. Here, we found that emodin, via ROS-related mechanism and suppressing the function of ATP-binding cassette super-family G member (ABCG2), which is known to be associated with Hoechst dye efflux activity of SP cells, not only reduced the ratio, inhibited clone formation, and eliminated sphere formation of SP cells effectively, but also promoted obviously the intracellular accumulation of doxorubicin, the main substrate of the efflux pump ABCG2. In addition, emodin could sensitize CDDP, via inhibition of expression of ABCG2, to overcome chemoresistance of SP cells. Importantly, similar to the experiment in vitro, emodin/CDDP co-treatment in vivo suppressed the tumor growth derived from SP cells through downregulating ABCG2 expression. Our results suggest that emodin is an effective agent targeting cancer stem-like SP cells of gallbladder carcinoma, either alone or acts as a chemotherapy enhancer. PMID:22974371

The effect of NO-donors on chloride efflux, intracellular Ca(2+) concentration and mRNA expression of CFTR and ENaC in cystic fibrosis airway epithelial cells.

PubMed

Oliynyk, Igor; Hussain, Rashida; Amin, Ahmad; Johannesson, Marie; Roomans, Godfried M

2013-06-01

Since previous studies showed that the endogenous bronchodilator, S-nitrosglutathione (GSNO), caused a marked increase in CFTR-mediated chloride (Cl(-)) efflux and improved the trafficking of CFTR to the plasma membrane, and that also the nitric oxide (NO)-donor GEA3162 had a similar, but smaller, effect on Cl(-) efflux, it was investigated whether the NO-donor properties of GSNO were relevant for its effect on Cl(-) efflux from airway epithelial cells. Hence, the effect of a number of other NO-donors, sodium nitroprusside (SNP), S-nitroso-N-acetyl-DL-penicillamine (SNAP), diethylenetriamine/nitric oxide adduct (DETA-NO), and diethylenetriamine/nitric oxide adduct (DEA-NONOate) on Cl(-) efflux from CFBE (∆F508/∆F508-CFTR) airway epithelial cells was tested. Cl(-) efflux was determined using the fluorescent N-(ethoxycarbonylmethyl)-6-methoxyquinoliniu bromide (MQAE)-technique. Possible changes in the intracellular Ca(2+) concentration were tested by the fluorescent fluo-4 method in a confocal microscope system. Like previously with GSNO, after 4 h incubation with the NO-donor, an increased Cl(-) efflux was found (in the order SNAP>DETA-NO>SNP). The effect of DEA-NONOate on Cl(-) efflux was not significant, and the compound may have (unspecific) deleterious effects on the cells. Again, as with GSNO, after a short (5 min) incubation, SNP had no significant effect on Cl(-) efflux. None of the NO-donors that had a significant effect on Cl(-) efflux caused significant changes in the intracellular Ca(2+) concentration. After 4 h preincubation, SNP caused a significant increase in the mRNA expression of CFTR. SNAP and DEA-NONOate decreased the mRNA expression of all ENaC subunits significantly. DETA-NO caused a significant decrease only in α-ENaC expression. After a short preincubation, none of the NO-donors had a significant effect, neither on the expression of CFTR, nor on that of the ENaC subunits in the presence and absence of L-cysteine. It can be concluded that the effect of GSNO on Cl(-) efflux is, at least in part, due to its properties as an NO-donor, and the effect is likely to be mediated by CFTR, not by Ca(2+)-activated Cl(-) channels. Copyright © 2013. Published by Elsevier Inc.

In vitro assessment of the interactions of dopamine β-hydroxylase inhibitors with human P-glycoprotein and Breast Cancer Resistance Protein.

PubMed

Bicker, Joana; Alves, Gilberto; Fortuna, Ana; Soares-da-Silva, Patrício; Falcão, Amílcar

2018-05-30

Inhibition of the biosynthesis of noradrenaline is a currently explored strategy for the treatment of hypertension, congestive heart failure and pulmonary arterial hypertension. While some dopamine β-hydroxylase (DBH) inhibitors cross the blood-brain barrier (BBB) and cause central as well as peripheral effects (nepicastat), others have limited access to the brain (etamicastat, zamicastat). In this context, peripheral selectivity is clinically advantageous, in order to prevent alterations of noradrenaline levels in the CNS and the occurrence of adverse central effects. A limited brain exposure results from the combination of several factors, such as a reduced passive permeability or affinity for efflux transporters, but efflux liabilities may also lead to unwanted drug-drug interactions (DDIs) in the presence of co-administered substrates or inhibitors. Thus, the purpose of the study herein presented was to explore the interaction of P-glycoprotein (P-gp) and Breast Cancer Resistance Protein (BCRP), the two major efflux transporters of the BBB that hamper the entry of several drugs to the brain, with the DBH inhibitors, etamicastat, nepicastat and zamicastat. Madin-Darby canine kidney cells (MDCK II) and transfected lines with human MDR1 (MDCK-MDR1) and ABCG2 (MDCK-BCRP) genes were used as a BBB surrogate model. P-gp and BCRP substrates and/or inhibitors were identified through intracellular accumulation and bidirectional permeability assays. The obtained data revealed that zamicastat is a concentration-dependent dual P-gp and BCRP inhibitor with IC 50 values of 73.8 ± 7.2 μM and 17.0 ± 2.7 μM, while etamicastat and nepicastat inhibited BCRP to greater extent than P-gp, with IC 50 values of 47.7 ± 1.8 μM and 59.2 ± 9.4 μM, respectively. Additionally, etamicastat was identified as P-gp and BCRP dual substrate, as demonstrated by net flux ratios of 5.84 and 3.87 and decreased >50% by verapamil and Ko143. Conversely, nepicastat revealed to be a P-gp-only substrate, with a net flux ratio of 2.01, reduced to 0.92 in the presence of verapamil. Furthermore, nepicastat displayed a consistently higher apparent permeability (>8.49 × 10 -6  cm s -1 ) than etamicastat (<0.58 × 10 -6  cm s -1 ). The identification of etamicastat as a dual efflux substrate suggests that P-gp and BCRP may be partially responsible for the limited central exposure of this compound, in association with its low passive permeability. Moreover, the weak efflux inhibitory potencies of etamicastat and nepicastat revealed a low DDI risk, while the dual P-gp/BCRP inhibition of zamicastat could be studied in the future with synergically effluxed compounds, for which BBB penetration is severely impaired. Copyright © 2018 Elsevier B.V. All rights reserved.

Carbon Dioxide Emissions From Kill Zones Around the Resurgent Dome, Long Valley Caldera, CA

NASA Astrophysics Data System (ADS)

Bergfeld, D.; Evans, W. C.; Farrar, C. D.; Howle, J. F.

2004-12-01

An episode of seismic unrest beneath the resurgent dome at Long Valley caldera (LVC) in eastern California began in 1980 and is associated with approximately 80 cm of cumulative uplift on parts of the dome since that time. Studies of hydrologic and geochemical parameters can be useful in determining the source of uplift; and of particular relevance here, studies of diffuse soil degassing and temperature have been used to examine relations between gas emissions, uplift, and energy release. We present results from an eighteen-month investigation of soil temperature, soil-gas chemistry and CO2 efflux from fourteen discrete areas of vegetation kill that have appeared inside the caldera over the past two decades. Compared with the tree-kill around Mammoth Mountain on the southwest rim of the caldera, dead zones we studied around the resurgent dome are small. Individually the areas cover between 800 and 36,000 m2. All of the areas have some sites with elevated CO2 flux and elevated soil temperature. \\delta 13C values of CO2 from sites in eight of the studied areas are between -5.7 and -3.9\\permil, and are within the range of magmatic CO2. Results from the flux measurements indicate that on average total CO2 emissions from four of the areas sum about 10 tonnes per day. The other vegetation kill areas currently have only a few sites that exhibit anomalous soil temperatures and CO2 flux, and CO2 emissions from these areas are typically less than 0.3 of a tonne per day. The chemical composition of gas emissions from thermal ground in kill zones located 1.5 to 2 km northwest of the Casa Diablo geothermal power plant demonstrate a connection between some of the dead areas and perturbations related to geothermal fluid production. These results and estimates of thermal output from two of the high flux grids are used to evaluate the premise that the gaseous and thermal anomalies are related to magmatic intrusion beneath the resurgent dome.

Comparative Analysis of Arabidopsis Ecotypes Reveals a Role for Brassinosteroids in Root Hydrotropism1[OPEN

PubMed Central

Wang, Meng; Yuan, Wei; Ren, Yan; Li, Ying; Zhang, Na; Kronzucker, Herbert J.

2018-01-01

Plant roots respond to soil moisture gradients and remodel their growth orientation toward water through hydrotropism, a process vital for acclimation to a changing soil environment. Mechanisms underlying the root hydrotropic response, however, remain poorly understood. Here, we examined hydrotropism in 31 Arabidopsis (Arabidopsis thaliana) ecotypes collected from different parts of the world and grown along moisture gradients in a specially designed soil-simulation system. Comparative transcriptome profiling and physiological analyses were carried out on three selected ecotypes, Wassilewskija (Ws), Columbia (Col-0) (strongly hydrotropic), Col-0 (moderately hydrotropic), and C24 (weakly hydrotropic), and in mutant lines with altered root hydrotropic responses. We show that H+ efflux, Ca2+ influx, redox homeostasis, epigenetic regulation, and phytohormone signaling may contribute to root hydrotropism. Among phytohormones, the role of brassinosteroids (BRs) was examined further. In the presence of an inhibitor of BR biosynthesis, the strong hydrotropic response observed in Ws was reduced. The root H+ efflux and primary root elongation also were inhibited when compared with C24, an ecotype that showed a weak hydrotropic response. The BR-insensitive mutant bri1-5 displayed higher rates of root growth inhibition and root curvature on moisture gradients in vertical or oblique orientation when compared with wild-type Ws. We also demonstrate that BRI1 (a BR receptor) interacts with AHA2 (a plasma membrane H+-ATPase) and that their expression patterns are highly coordinated. This synergistic action may contribute to the strong hydrotropism observed in Ws. Our results suggest that BR-associated H+ efflux is critical in the hydrotropic response of Arabidopsis roots. PMID:29439211

Serum cholesterol acceptor capacity in intrauterine growth restricted fetuses.

PubMed

Pecks, Ulrich; Rath, Werner; Bauerschlag, Dirk O; Maass, Nicolai; Orlikowsky, Thorsten; Mohaupt, Markus G; Escher, Geneviève

2017-10-26

Intrauterine growth restriction (IUGR) is an independent risk factor for the development of cardiovascular diseases later in life. The mechanisms whereby slowed intrauterine growth confers vascular risk are not clearly established. In general, a disturbed cholesterol efflux has been linked to atherosclerosis. The capacity of serum to accept cholesterol has been repeatedly evaluated in clinical studies by the use of macrophage-based cholesterol efflux assays and, if disturbed, precedes atherosclerotic diseases years before the clinical diagnosis. We now hypothesized that circulating cholesterol acceptors in IUGR sera specifically interfere with cholesterol transport mechanisms leading to diminished cholesterol efflux. RAW264.7 cells were used to determine efflux of [3H]-cholesterol in response to [umbilical cord serum (IUGR), n=20; controls (CTRL), n=20]. Cholesterol efflux was lower in IUGR as compared to controls [controls: mean 7.7% fractional [3H]-cholesterol efflux, standard deviation (SD)=0.98; IUGR: mean 6.3%, SD=0.79; P<0.0001]. Values strongly correlated to HDL (ρ=0.655, P<0.0001) and apoE (ρ=0.510, P=0.0008), and mildly to apoA1 (ρ=0.3926, P=0.0122) concentrations. Reduced cholesterol efflux in IUGR could account for the enhanced risk of developing cardiovascular diseases later in life.

Termites as a factor of spatial differentiation of CO2 fluxes from the soils of monsoon tropical forests in southern Vietnam

NASA Astrophysics Data System (ADS)

Lopes de Gerenyu, V. O.; Anichkin, A. E.; Avilov, V. K.; Kuznetsov, A. N.; Kurganova, I. N.

2015-02-01

Annual dynamics of CO2 fluxes from soils and the impact of the living activity of termites on them were studied in plain lagerstroemia semideciduous monsoon tropical forests of southern Vietnam. On the plot populated by Globitermes sulphureus and Odontotermes termites, a detailed study of the spatial heterogeneity of the CO2 emission from the surface of soil and termite mounds was performed in the wet and dry seasons. It was found that the average rate of the CO2 emission from termite mounds was two times and more higher than that from the background soil surface. In the dry season, it comprised 91 ± 7 mg C/m2 per h from the background soil and 196 ± 16 mg C/m2 per h from the termite mounds. In the wet season, the CO2 emission rate was considerably higher and reached 266 ± 40 and 520 ± 39 mg C/m2 per h, respectively. The maximum rates of CO2 fluxes were determined in the wet season in some of the measurement chambers installed on termite mounds; they reached 730-880 mg C/m2 per h. Though termite mounds occupy about 4% of the area of tropical forest ecosystems, the overall effect of termites on the carbon budget was more significant; according to our estimates, it reached up to 10% of the total efflux of CO2 from the soil surface.

Soybean NADP-Malic Enzyme Functions in Malate and Citrate Metabolism and Contributes to Their Efflux under Al Stress.

PubMed

Zhou, Ying; Yang, Zhenming; Xu, Yuezi; Sun, Haoran; Sun, Zhitao; Lin, Bao; Sun, Wenjing; You, Jiangfeng

2017-01-01

Malate accumulation has been suggested to balance Al-induced citrate synthesis and efflux in soybean roots. To test this hypothesis, characteristics of Al-induced accumulation and efflux of citrate and malate were compared between two soybean genotypes combining a functional analysis of GmME1 putatively encode a cytosolic NADP-malic enzyme. Similar amounts of citrate were released, and root elongation was equally inhibited before 8 h of Al treatment of Jiyu 70 and Jiyu 62 cultivars. Jiyu 70 began to secrete more citrate and exhibited higher Al resistance than did Jiyu 62 at 12 h. A sustained increase in internal malate and citrate concentrations was observed in Jiyu 70 at 24 h of Al treatment. However, Jiyu 62 decreased its malate concentration at 12 h and its citrate concentration at 24 h of Al treatment. GmME1 localized to the cytoplast and clustered closely with cytosolic malic enzymes AtME2 and SgME1 and was constitutively expressed in the roots. Al treatment induced higher NADP-malic enzyme activities and GmME1 expression levels in Jiyu 70 than in Jiyu 62 within 24 h. Compared with wild-type hairy roots, over-expressing GmME1 in hairy roots ( GmME1 -OE) produced higher expression levels of GmME1 but did not change the expression patterns of either of the putative citrate transporter genes GmAACT1 and GmFRDL or the malate transporter gene GmALMT1 , with or without Al treatment. GmME1 -OE showed a higher internal concentration and external efflux of both citrate and malate at 4 h of Al stress. Lighter hematoxylin staining and lower Al contents in root apices of GmME1 -OE hairy roots indicated greater Al resistance. Comprehensive experimental results suggest that sustaining Al-induced citrate efflux depends on the malate pool in soybean root apices. GmME1 encodes a cytosolic malic enzyme that contributes to increased internal malate and citrate concentrations and their external efflux to confer higher Al resistance.

Multidrug Resistance-associated Protein-1 (MRP-1)-dependent Glutathione Disulfide (GSSG) Efflux as a Critical Survival Factor for Oxidant-enriched Tumorigenic Endothelial Cells.

PubMed

Gordillo, Gayle M; Biswas, Ayan; Khanna, Savita; Spieldenner, James M; Pan, Xueliang; Sen, Chandan K

2016-05-06

Endothelial cell tumors are the most common soft tissue tumors in infants. Tumor-forming endothelial (EOMA) cells are able to escape cell death fate despite excessive nuclear oxidant burden. Our previous work recognized perinuclear Nox-4 as a key contributor to EOMA growth. The objective of this work was to characterize the mechanisms by which EOMA cells evade oxidant toxicity and thrive. In EOMA cells, compared with in the cytosol, the nuclear GSSG/GSH ratio was 5-fold higher. Compared to the ratio observed in healthy murine aortic endothelial (MAE) cells, GSSG/GSH was over twice as high in EOMA cells. Multidrug resistance-associated protein-1 (MRP-1), an active GSSG efflux mechanism, showed 2-fold increased activity in EOMA compared with MAE cells. Hyperactive YB-1 and Ape/Ref-1 were responsible for high MRP-1 expression in EOMA. Proximity ligand assay demonstrated MRP-1 and YB-1 binding. Such binding enabled the nuclear targeting of MRP-1 in EOMA in a leptomycin-B-sensitive manner. MRP-1 inhibition as well as knockdown trapped nuclear GSSG, causing cell death of EOMA. Disulfide loading of cells by inhibition of GSSG reductase (bischoloronitrosourea) or thioredoxin reductase (auranofin) was effective in causing EOMA death as well. In sum, EOMA cells survive a heavy oxidant burden by rapid efflux of GSSG, which is lethal if trapped within the cell. A hyperactive MRP-1 system for GSSG efflux acts as a critical survival factor for these cells, making it a potential target for EOMA therapeutics. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Potassium efflux fires the canon: Potassium efflux as a common trigger for canonical and noncanonical NLRP3 pathways.

PubMed

Rivers-Auty, Jack; Brough, David

2015-10-01

Murine caspase-11 and its human orthologues, caspase-4 and caspase-5, activate an inflammatory response following cytoplasmic recognition of cell wall constituents from Gram-negative bacteria, such as LPS. This inflammatory response involves pyroptotic cell death and the concomitant release of IL-1α, as well as the production of IL-1β and IL-18 through the noncanonical NLR family, pyrin domain containing 3 (NLRP3) pathway. This commentary discusses three papers in this issue of the European Journal of Immunology that advance our understanding of the roles of caspase-11, -4, and -5 in the noncanonical pathway. By utilizing the new gene editing technique, clustered regularly interspaced short palindromic repeats (CRISPR), as well as sensitive cell imaging techniques, these papers establish that cytoplasmic LPS-dependent IL-1β production requires the NLRP3 inflammasome and that its activation is dependent on K(+) efflux, whereas IL-1α release and pyroptotic cell death pathways are NLRP3-independent. These findings expand on previous research implicating K(+) efflux as the principal trigger for NLRP3 activation and suggest that canonical and noncanonical NLRP3 pathways are not as dissimilar as first thought. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.