Sample records for coarse pm bioassay

  1. Effects of Source-Apportioned Coarse Particulate Matter (PM) ...

    EPA Pesticide Factsheets

    The Cleveland Multiple Air Pollutant Study (CMAPS) is one of the first comprehensive studies conducted to evaluate particulate matter (PM) over local and regional scales. Cleveland and the nearby Ohio River Valley impart significant regional sources of air pollution including coal combustion and steel production. Size-fractionated PM (coarse, fine and ultrafine) were collected from an urban site (G.T. Craig (GTC)) and a rural site (Chippewa Lake monitor (CLM) located 53 km southwest of Cleveland) from July 2009 to June 2010. Following collection, resulting speciated PM data were apportioned to identify local industrial emission sources for each size fraction and location, indicating these samples were enriched with resident emission sources. This study was designed to determine whether exposure of the CMAPS coarse PM contributes to the exacerbation of allergic asthma. Non-sensitized and house dust mite (HDM)-sensitized female Balb/cJ mice (n= 8/group) were exposed via oropharyngeal (OP) aspiration to 100 g coarse fractions of one of five source apportioned groups representative of distinct time periods of 4-6 weeks (traffic, coal, steel 1, steel 2, or winter PM) and OP challenge with HDM conducted 2 hr following dosing with PM. Two days later, airway responsiveness to methacholine aerosol was assessed in anesthetized ventilated control and HDM mice. The HDM-allergic mice demonstrated increased airway reactivity in comparison to control mice. Bronchoalveolar l

  2. DEVELOPMENT AND EVALUATION OF A CONTINUOUS COARSE (PM10-PM2.5) PARTICLE MONITOR

    EPA Science Inventory

    In this paper, we describe the development and laboratory and field evaluation of a continuous coarse (2.5-10 um) particle mass (PM) monitor that can provide reliable measurements of the coarse mass (CM) concentrations in time intervals as short as 5-10 min. The operating princ...

  3. COARSE PM EMISSIONS MODEL DEVELOPMENT AND INVENTORY VALIDATION

    EPA Science Inventory

    The proposed research will contribute to our understanding of the sources and controlling variables of coarse PM. This greater understanding, along with an increase in our ability to predict these emissions, will enable more efficient pollution control strategy development. Ad...

  4. FIELD EVALUATION OF A SAMPLING APPROACH FOR PM-COARSE AEROSOLS

    EPA Science Inventory

    Subsequent to a 1997 revision of the national ambient air quality standards (NAAQS) for particulate matter (PM), the US Environmental Protection Agency is investigating the development of sampling methodology for a possible new coarse particle standard. When developed, this me...

  5. SEASONAL EFFECTS OF ULTRAFINE, FINE, AND COARSE PARTICULATE MATTER (PM) ON HUMAN PRIMARY AIRWAY EPITHELIAL CELLS

    EPA Science Inventory

    SEASONAL EFFECTS OF ULTRAFINE, FINE, AND COARSE PARTICULATE MATTER (PM) ON HUMAN PRIMARY AIRWAY EPITHELIAL CELLS

    Exposure of humans to PM results in increased mortality and morbidity. Recent toxicology studies have shown a number of pathophysiological pulmonary and car...

  6. (PRESENTED NAQC SAN FRANCISCO, CA) COARSE PM METHODS STUDY: STUDY DESIGN AND RESULTS

    EPA Science Inventory

    Comprehensive field studies were conducted to evaluate the performance of sampling methods for measuring the coarse fraction of PM10 in ambient air. Five separate sampling approaches were evaluated at each of three sampling sites. As the primary basis of comparison, a discrete ...

  7. A new technique for online measurement of total and water-soluble copper (Cu) in coarse particulate matter (PM).

    PubMed

    Wang, Dongbin; Shafer, Martin M; Schauer, James J; Sioutas, Constantinos

    2015-04-01

    This study presents a novel system for online, field measurement of copper (Cu) in ambient coarse (2.5-10 μm) particulate matter (PM). This new system utilizes two virtual impactors combined with a modified liquid impinger (BioSampler) to collect coarse PM directly as concentrated slurry samples. The total and water-soluble Cu concentrations are subsequently measured by a copper Ion Selective Electrode (ISE). Laboratory evaluation results indicated excellent collection efficiency (over 85%) for particles in the coarse PM size ranges. In the field evaluations, very good agreements for both total and water-soluble Cu concentrations were obtained between online ISE-based monitor measurements and those analyzed by means of inductively coupled plasma mass spectrometry (ICP-MS). Moreover, the field tests indicated that the Cu monitor could achieve near-continuous operation for at least 6 consecutive days (a time resolution of 2-4 h) without obvious shortcomings. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. INCREASED AIRWAYS INFLAMMATION AND MODIFIED BAL CELL SURFACE PHENOTYPES IN ASTHMATICS EXPOSED TO COARSE SIZE (PM2.5-10) CONCENTRATED AMBIENT PARTICLES (CAPS)

    EPA Science Inventory

    Although associations between inhalation of PM10 and disease morbidity and mortality appear stronger for fine (PM2.5) vs coarse (PM2.5-10) or ultrafine/UF (PM<0.1) PM. In vitro studies suggest that PM2.5-10 are more potent in inducing pro-inflammatory cytokine responses from alve...

  9. MULTI-SITE EVALUATIONS OF CANDIDATE METHODOLOGIES FOR DETERMINING COARSE PARTICULATE (PM 10-2.5) CONCENTRATIONS: AUGUST 2005 UPDATED REPORT REGARDING SECOND-GENERATION AND NEW PM 10-2.5 SAMPLERS

    EPA Science Inventory

    Multi-site field studies were conducted to evaluate the performance of sampling methods for measuring the coarse fraction of PM10 (PM10 2.5) in ambient air. The field studies involved the use of both time-integrated filter-based and direct continuous methods. Despite operationa...

  10. Source identification of coarse particles in the Desert ...

    EPA Pesticide Factsheets

    The Desert Southwest Coarse Particulate Matter Study was undertaken to further our understanding of the spatial and temporal variability and sources of fine and coarse particulate matter (PM) in rural, arid, desert environments. Sampling was conducted between February 2009 and February 2010 in Pinal County, AZ near the town of Casa Grande where PM concentrations routinely exceed the U.S. National Ambient Air Quality Standards (NAAQS) for both PM10 and PM2.5. In this desert region, exceedances of the PM10 NAAQS are dominated by high coarse particle concentrations, a common occurrence in this region of the United States. This work expands on previously published measurements of PM mass and chemistry by examining the sources of fine and coarse particles and the relative contribution of each to ambient PM mass concentrations using the Positive Matrix Factorization receptor model (Clements et al., 2014). Highlights • Isolation of coarse particles from fine particle sources. • Unique chemical composition of coarse particles. • Role of primary biological particles on aerosol loadings.

  11. Characterization of coarse particulate matter in school gyms

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Branis, Martin, E-mail: branis@natur.cuni.cz; Safranek, Jiri

    2011-05-15

    We investigated the mass concentration, mineral composition and morphology of particles resuspended by children during scheduled physical education in urban, suburban and rural elementary school gyms in Prague (Czech Republic). Cascade impactors were deployed to sample the particulate matter. Two fractions of coarse particulate matter (PM{sub 10-2.5} and PM{sub 2.5-1.0}) were characterized by gravimetry, energy dispersive X-ray spectrometry and scanning electron microscopy. Two indicators of human activity, the number of exercising children and the number of physical education hours, were also recorded. Lower mass concentrations of coarse particulate matter were recorded outdoors (average PM{sub 10-2.5} 4.1-7.4 {mu}g m{sup -3} andmore » PM{sub 2.5-1.0} 2.0-3.3 {mu}g m{sup -3}) than indoors (average PM{sub 10-2.5} 13.6-26.7 {mu}g m{sup -3} and PM{sub 2.5-1.0} 3.7-7.4 {mu}g m{sup -3}). The indoor concentrations of coarse aerosol were elevated during days with scheduled physical education with an average indoor-outdoor (I/O) ratio of 2.5-16.3 for the PM{sub 10-2.5} and 1.4-4.8 for the PM{sub 2.5-1.0} values. Under extreme conditions, the I/O ratios reached 180 (PM{sub 10-2.5}) and 19.1 (PM{sub 2.5-1.0}). The multiple regression analysis based on the number of students and outdoor coarse PM as independent variables showed that the main predictor of the indoor coarse PM concentrations is the number of students in the gym. The effect of outdoor coarse PM was weak and inconsistent. The regression models for the three schools explained 60-70% of the particular dataset variability. X-ray spectrometry revealed 6 main groups of minerals contributing to resuspended indoor dust. The most abundant particles were those of crustal origin composed of Si, Al, O and Ca. Scanning electron microscopy showed that, in addition to numerous inorganic particles, various types of fibers and particularly skin scales make up the main part of the resuspended dust in the gyms. In conclusion

  12. California wildfires of 2008: coarse and fine particulate matter toxicity.

    PubMed

    Wegesser, Teresa C; Pinkerton, Kent E; Last, Jerold A

    2009-06-01

    During the last week of June 2008, central and northern California experienced thousands of forest and brush fires, giving rise to a week of severe fire-related particulate air pollution throughout the region. California experienced PM(10-2.5) (particulate matter with mass median aerodynamic diameter > 2.5 mum to < 10 mum; coarse ) and PM(2.5) (particulate matter with mass median aerodynamic diameter < 2.5 mum; fine) concentrations greatly in excess of the air quality standards and among the highest values reported at these stations since data have been collected. These observations prompt a number of questions about the health impact of exposure to elevated levels of PM(10-2.5) and PM(2.5) and about the specific toxicity of PM arising from wildfires in this region. Toxicity of PM(10-2.5) and PM(2.5) obtained during the time of peak concentrations of smoke in the air was determined with a mouse bioassay and compared with PM samples collected under normal conditions from the region during the month of June 2007. Concentrations of PM were not only higher during the wildfire episodes, but the PM was much more toxic to the lung on an equal weight basis than was PM collected from normal ambient air in the region. Toxicity was manifested as increased neutrophils and protein in lung lavage and by histologic indicators of increased cell influx and edema in the lung. We conclude that the wildfire PM contains chemical components toxic to the lung, especially to alveolar macrophages, and they are more toxic to the lung than equal doses of PM collected from ambient air from the same region during a comparable season.

  13. Influences of wind and precipitation on different-sized particulate matter concentrations (PM2.5, PM10, PM2.5-10)

    NASA Astrophysics Data System (ADS)

    Zhang, Boen; Jiao, Limin; Xu, Gang; Zhao, Suli; Tang, Xin; Zhou, Yue; Gong, Chen

    2018-06-01

    Though it is recognized that meteorology has a great impact on the diffusion, accumulation and transport of air pollutants, few studies have investigated the impacts on different-sized particulate matter concentrations. We conducted a systematic comparative analysis and used the framework of generalized additive models (GAMs) to explore the influences of critical meteorological parameters, wind and precipitation, on PM2.5, PM10 and PM2.5-10 concentrations in Wuhan during 2013-2016. Overall, results showed that the impacts of wind and precipitation on different-sized PM concentrations are significantly different. The fine PM concentrations decreased gradually with the increase of wind speed, while coarse PM concentrations would increase due to dust resuspension under strong wind. Wind direction exerts limited influence on coarse PM concentrations. Wind speed was linearly correlated with log-transformed PM2.5 concentrations, but nonlinearly correlated with log-transformed PM10 and PM2.5-10 concentrations. We also found the PM2.5 and PM2.5-10 concentrations decreased by nearly 60 and 15% when the wind speed was up to 6 m/s, respectively, indicating a stronger negative impact of wind-speed on fine PM than coarse PM. The scavenging efficiency of precipitation on PM2.5-10 was over twice as high as on PM2.5. Our findings may help to understand the impacts of meteorology on different PM concentrations as well as discriminate and forecast variation in particulate matter concentrations.

  14. Characterization of coarse particulate matter in school gyms.

    PubMed

    Braniš, Martin; Šafránek, Jiří

    2011-05-01

    We investigated the mass concentration, mineral composition and morphology of particles resuspended by children during scheduled physical education in urban, suburban and rural elementary school gyms in Prague (Czech Republic). Cascade impactors were deployed to sample the particulate matter. Two fractions of coarse particulate matter (PM(10-2.5) and PM(2.5-1.0)) were characterized by gravimetry, energy dispersive X-ray spectrometry and scanning electron microscopy. Two indicators of human activity, the number of exercising children and the number of physical education hours, were also recorded. Lower mass concentrations of coarse particulate matter were recorded outdoors (average PM(10-2.5) 4.1-7.4 μg m(-3) and PM(2.5-1.0) 2.0-3.3 μg m(-3)) than indoors (average PM(10-2.5) 13.6-26.7 μg m(-3) and PM(2.5-1.0) 3.7-7.4 μg m(-3)). The indoor concentrations of coarse aerosol were elevated during days with scheduled physical education with an average indoor-outdoor (I/O) ratio of 2.5-16.3 for the PM(10-2.5) and 1.4-4.8 for the PM(2.5-1.0) values. Under extreme conditions, the I/O ratios reached 180 (PM(10-2.5)) and 19.1 (PM(2.5-1.0)). The multiple regression analysis based on the number of students and outdoor coarse PM as independent variables showed that the main predictor of the indoor coarse PM concentrations is the number of students in the gym. The effect of outdoor coarse PM was weak and inconsistent. The regression models for the three schools explained 60-70% of the particular dataset variability. X-ray spectrometry revealed 6 main groups of minerals contributing to resuspended indoor dust. The most abundant particles were those of crustal origin composed of Si, Al, O and Ca. Scanning electron microscopy showed that, in addition to numerous inorganic particles, various types of fibers and particularly skin scales make up the main part of the resuspended dust in the gyms. In conclusion, school gyms were found to be indoor microenvironments with high

  15. Characterization and Cytotoxicity of PM<0.2, PM0.2–2.5 and PM2.5–10 around MSWI in Shanghai, China

    PubMed Central

    Cao, Lingling; Zeng, Jianrong; Liu, Ke; Bao, Liangman; Li, Yan

    2015-01-01

    Background: The potential impact of municipal solid waste incineration (MSWI), which is an anthropogenic source of aerosol emissions, is of great public health concern. This study investigated the characterization and cytotoxic effects of ambient ultrafine particles (PM<0.2), fine particles (PM0.2–2.5) and coarse particles (PM2.5–10) collected around a municipal solid waste incineration (MSWI) plant in the Pudong district of Shanghai. Methods: Mass concentrations of trace elements in particulate matter (PM) samples were determined using ICP-MS (Inductively Coupled Plasma Mass Spectrometry). The cytotoxicity of sampled atmospheric PM was evaluated by cell viability and reactive oxygen species (ROS) levels in A549 cells. Result: The mass percentage of PM0.2–2.5 accounted for 72.91% of the total mass of PM. Crustal metals (Mg, Al, and Ti) were abundant in the coarse particles, while the anthropogenic elements (V, Ni, Cu, Zn, Cd, and Pb) were dominant in the fine particles. The enrichment factors of Zn, Cd and Pb in the fine and ultrafine particles were extremely high (>100). The cytotoxicity of the size-resolved particles was in the order of coarse particles < fine particles < ultrafine particles. Conclusions: Fine particles dominated the MSWI ambient particles. Emissions from the MSWI could bring contamination of anthropogenic elements (Zn, Cd and Pb) into ambient environment. The PM around the MSWI plant displayed an additive toxic effect, and the ultrafine and fine particles possessed higher biological toxicity than the coarse particles. PMID:25985309

  16. Macrophage reactive oxygen species activity of water-soluble and water-insoluble fractions of ambient coarse, PM2.5 and ultrafine particulate matter (PM) in Los Angeles

    NASA Astrophysics Data System (ADS)

    Wang, Dongbin; Pakbin, Payam; Shafer, Martin M.; Antkiewicz, Dagmara; Schauer, James J.; Sioutas, Constantinos

    2013-10-01

    This study describes an investigation of the relative contributions of water-soluble and water-insoluble portions of ambient particulate matter (PM) to cellular redox activity. Size-fractionated ambient PM samples (coarse, PM2.5 and ultrafine PM) were collected in August-September of 2012 at an urban site in Los Angeles, using the Versatile Aerosol Concentration Enrichment System (VACES)/BioSampler tandem system. In this system, size-fractionated ambient PM was concentrated and collected directly into an aqueous suspension, thereby eliminating the need for solvent extraction required for PM collected on filter substrates. Separation of water-soluble and water-insoluble fractions of PM was achieved by 10 kilo-Delton ultra-filtration of the collected suspension slurries. Chemical analysis, including organic carbon, metals and trace elements, and inorganic ions, as well as measurement of macrophage reactive oxygen species (ROS) activity were performed on the slurries. Correlation between ROS activity and different chemical components of PM was evaluated to identify the main drivers of PM toxicity. Results from this study illustrate that both water-soluble and water-insoluble portions of PM play important roles in influencing potential cellular toxicity. While the water-soluble species contribute the large majority of the ROS activity per volume of sampled air, the highest intrinsic ROS activity (i.e. expressed per PM mass) is observed for the water-insoluble portions. Organic compounds in both water-soluble and water-insoluble portions of ambient PM, as well as transition metals, several with recognized redox activity (Mn, V, Cu and Zn), are highly correlated with ROS activity. These results may underscore the potential of these chemicals in driving the toxicity of ambient PM. Results from this study also suggest that collection of particles directly into a liquid suspension for toxicological analysis may be superior to conventional filtration by eliminating the need

  17. Chemical characterization of outdoor and subway fine (PM(2.5-1.0)) and coarse (PM(10-2.5)) particulate matter in Seoul (Korea) by computer-controlled scanning electron microscopy (CCSEM).

    PubMed

    Byeon, Sang-Hoon; Willis, Robert; Peters, Thomas M

    2015-02-13

    Outdoor and indoor (subway) samples were collected by passive sampling in urban Seoul (Korea) and analyzed with computer-controlled scanning electron microscopy coupled with energy dispersive x-ray spectroscopy (CCSEM-EDX). Soil/road dust particles accounted for 42%-60% (by weight) of fine particulate matter larger than 1 µm (PM(2.5-1.0)) in outdoor samples and 18% of PM2.5-1.0 in subway samples. Iron-containing particles accounted for only 3%-6% in outdoor samples but 69% in subway samples. Qualitatively similar results were found for coarse particulate matter (PM(10-2.5)) with soil/road dust particles dominating outdoor samples (66%-83%) and iron-containing particles contributing most to subway PM(10-2.5) (44%). As expected, soil/road dust particles comprised a greater mass fraction of PM(10-2.5) than PM(2.5-1.0). Also as expected, the mass fraction of iron-containing particles was substantially less in PM(10-2.5) than in PM(2.5-1.0). Results of this study are consistent with known emission sources in the area and with previous studies, which showed high concentrations of iron-containing particles in the subway compared to outdoor sites. Thus, passive sampling with CCSEM-EDX offers an inexpensive means to assess PM(2.5-1.0) and PM(10-2.5) simultaneously and by composition at multiple locations.

  18. Predictors of coarse particulate matter and associated endotoxin concentrations in residential environments

    NASA Astrophysics Data System (ADS)

    Bari, Md. Aynul; MacNeill, Morgan; Kindzierski, Warren B.; Wallace, Lance; Héroux, Marie-Ève; Wheeler, Amanda J.

    2014-08-01

    Exposure to coarse particulate matter (PM), i.e., particles with an aerodynamic diameter between 2.5 and 10 μm (PM10-2.5), is of increasing interest due to the potential for health effects including asthma, allergy and respiratory symptoms. Limited information is available on indoor and outdoor coarse PM and associated endotoxin exposures. Seven consecutive 24-h samples of indoor and outdoor coarse PM were collected during winter and summer 2010 using Harvard Coarse Impactors in a total of 74 Edmonton homes where no reported smoking took place. Coarse PM filters were subsequently analyzed for endotoxin content. Data were also collected on indoor and outdoor temperature, relative humidity, air exchange rate, housing characteristics and occupants' activities. During winter, outdoor concentrations of coarse PM (median = 6.7 μg/m3, interquartile range, IQR = 3.4-12 μg/m3) were found to be higher than indoor concentrations (median 3.4 μg/m3, IQR = 1.6-5.7 μg/m3); while summer levels of indoor and outdoor concentrations were similar (median 4.5 μg/m3, IQR = 2.3-6.8 μg/m3, and median 4.7 μg/m3, IQR = 2.1-7.9 μg/m3, respectively). Similar predictors were identified for indoor coarse PM in both seasons and included corresponding outdoor coarse PM concentrations, whether vacuuming, sweeping or dusting was performed during the sampling period, and number of occupants in the home. Winter indoor coarse PM predictors also included the number of dogs and indoor endotoxin concentrations. Summer median endotoxin concentrations (indoor: 0.41 EU/m3, outdoor: 0.64 EU/m3) were 4-fold higher than winter concentrations (indoor: 0.12 EU/m3, outdoor: 0.16 EU/m3). Other than outdoor endotoxin concentrations, indoor endotoxin concentration predictors for both seasons were different. Winter endotoxin predictors also included presence of furry pets and whether the vacuum had a high efficiency particulate air (HEPA) filter. Summer endotoxin predictors were problems with mice in the

  19. Analysis of PM10, PM2.5, and PM2 5-10 concentrations in Santiago, Chile, from 1989 to 2001.

    PubMed

    Koutrakis, Petros; Sax, Sonja N; Sarnat, Jeremy A; Coull, Brent; Demokritou, Phil; Oyola, Pedro; Garcia, Javier; Gramsch, Ernesto

    2005-03-01

    Daily particle samples were collected in Santiago, Chile, at four urban locations from January 1, 1989, through December 31, 2001. Both fine PM with da < 2.5 microm (PM2.5) and coarse PM with 2.5 < da < 10 microm (PM2.5-10) were collected using dichotomous samplers. The inhalable particle fraction, PM10, was determined as the sum of fine and coarse concentrations. Wind speed, temperature and relative humidity (RH) were also measured continuously. Average concentrations of PM2.5 for the 1989-2001 period ranged from 38.5 microg/m3 to 53 microg/m3. For PM2.5-10 levels ranged from 35.8-48.2 microg/m3 and for PM10 results were 74.4-101.2 microg/m3 across the four sites. Both annual and daily PM2.5 and PM10 concentration levels exceeded the U.S. National Ambient Air Quality Standards and the European Union concentration limits. Mean PM2.5 levels during the cold season (April through September) were more than twice as high as those observed in the warm season (October through March); whereas coarse particle levels were similar in both seasons. PM concentration trends were investigated using regression models, controlling for site, weekday, month, wind speed, temperature, and RH. Results showed that PM2.5 concentrations decreased substantially, 52% over the 12-year period (1989-2000), whereas PM2.5-10 concentrations increased by approximately 50% in the first 5 years and then decreased by a similar percentage over the following 7 years. These decreases were evident even after controlling for significant climatic effects. These results suggest that the pollution reduction programs developed and implemented by the Comisión Nacional del Medio Ambiente (CONAMA) have been effective in reducing particle levels in the Santiago Metropolitan region. However, particle levels remain high and it is thus imperative that efforts to improve air quality continue.

  20. Source apportionment of speciated PM2.5 and non-parametric regressions of PM2.5 and PM(coarse) mass concentrations from Denver and Greeley, Colorado, and construction and evaluation of dichotomous filter samplers

    NASA Astrophysics Data System (ADS)

    Piedrahita, Ricardo A.

    The Denver Aerosol Sources and Health study (DASH) was a long-term study of the relationship between the variability in fine particulate mass and chemical constituents (PM2.5, particulate matter less than 2.5mum) and adverse health effects such as cardio-respiratory illnesses and mortality. Daily filter samples were chemically analyzed for multiple species. We present findings based on 2.8 years of DASH data, from 2003 to 2005. Multilinear Engine 2 (ME-2), a receptor-based source apportionment model was applied to the data to estimate source contributions to PM2.5 mass concentrations. This study relied on two different ME-2 models: (1) a 2-way model that closely reflects PMF-2; and (2) an enhanced model with meteorological data that used additional temporal and meteorological factors. The Coarse Rural Urban Sources and Health study (CRUSH) is a long-term study of the relationship between the variability in coarse particulate mass (PMcoarse, particulate matter between 2.5 and 10mum) and adverse health effects such as cardio-respiratory illnesses, pre-term births, and mortality. Hourly mass concentrations of PMcoarse and fine particulate matter (PM2.5) are measured using tapered element oscillating microbalances (TEOMs) with Filter Dynamics Measurement Systems (FDMS), at two rural and two urban sites. We present findings based on nine months of mass concentration data, including temporal trends, and non-parametric regressions (NPR) results, which were used to characterize the wind speed and wind direction relationships that might point to sources. As part of CRUSH, 1-year coarse and fine mode particulate matter filter sampling network, will allow us to characterize the chemical composition of the particulate matter collected and perform spatial comparisons. This work describes the construction and validation testing of four dichotomous filter samplers for this purpose. The use of dichotomous splitters with an approximate 2.5mum cut point, coupled with a 10mum cut

  1. Correlating bioaerosol load with PM2.5 and PM10cf concentrations: a comparison between natural desert and urban-fringe aerosols

    NASA Astrophysics Data System (ADS)

    Boreson, Justin; Dillner, Ann M.; Peccia, Jordan

    2004-11-01

    Seasonal allergies and microbial mediated respiratory diseases, can coincide with elevated particulate matter concentrations, often when dry desert soils are disturbed. In addition to effects from the allergens, allergic and asthmatic responses may be enhanced when chemical and biological constituents of particulate matter (PM) are combined together. Because of these associations and also the recent regulatory and health-related interests of monitoring PM2.5, separately from total PM10, the biological loading between the fine (dp<2.5 μm) and coarse (2.5 μmPM was studied. To investigate spatial and seasonal differences of biological loading within PM, 24-h fine and coarse PM fractions were collected at a natural desert area and an urban fringe site located in the expanding Phoenix, Arizona metropolitan area during winter, spring, and summer seasons. Elemental carbon and inorganic ions were measured to determine the relative influence that anthropogenic sources, such as traffic, had on the aerosol composition. Total protein concentration was used as a surrogate measure of total biological concentration within the PM2.5 and PM10cf (coarse fraction) size ranges. In all seasons, coarse protein at the urban fringe was consistently higher than the natural desert. When high-anthropogenic PM events were separated from the data set, a positive significant correlation (p<0.05) was found between protein and coarse PM fraction, but not in the fine fraction. An 18S rDNA clone library was developed from PM10 aerosol samples to characterize the type and phylogenetic diversity of airborne eukaryotic (non-bacterial) microorganisms existing in ambient PM for the urban fringe and natural desert. Both sites contained allergenic organisms. Some groups of eukaryotic species were exclusive to only one of the sites. The natural desert contained more species of Basidiomycota fungi and the urban fringe contained more species of green plants, suggesting that the

  2. 40 CFR Table F-5 to Subpart F of... - Estimated Mass Concentration Measurement of PM2.5 for Idealized “Typical” Coarse Aerosol Size...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 5 2011-07-01 2011-07-01 false Estimated Mass Concentration... 53—Estimated Mass Concentration Measurement of PM2.5 for Idealized “Typical” Coarse Aerosol Size Distribution Particle Aerodynamic Diameter (µm) Test Sampler Fractional Sampling Effectiveness Interval Mass...

  3. 40 CFR Table F-5 to Subpart F of... - Estimated Mass Concentration Measurement of PM2.5 for Idealized “Typical” Coarse Aerosol Size...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 5 2010-07-01 2010-07-01 false Estimated Mass Concentration... 53—Estimated Mass Concentration Measurement of PM2.5 for Idealized “Typical” Coarse Aerosol Size Distribution Particle Aerodynamic Diameter (µm) Test Sampler Fractional Sampling Effectiveness Interval Mass...

  4. Chemical Characterization of Outdoor and Subway Fine (PM2.5–1.0) and Coarse (PM10–2.5) Particulate Matter in Seoul (Korea) by Computer-Controlled Scanning Electron Microscopy (CCSEM)

    PubMed Central

    Byeon, Sang-Hoon; Willis, Robert; Peters, Thomas M.

    2015-01-01

    Outdoor and indoor (subway) samples were collected by passive sampling in urban Seoul (Korea) and analyzed with computer-controlled scanning electron microscopy coupled with energy dispersive x-ray spectroscopy (CCSEM-EDX). Soil/road dust particles accounted for 42%–60% (by weight) of fine particulate matter larger than 1 µm (PM2.5–1.0) in outdoor samples and 18% of PM2.5–1.0 in subway samples. Iron-containing particles accounted for only 3%–6% in outdoor samples but 69% in subway samples. Qualitatively similar results were found for coarse particulate matter (PM10–2.5) with soil/road dust particles dominating outdoor samples (66%–83%) and iron-containing particles contributing most to subway PM10–2.5 (44%). As expected, soil/road dust particles comprised a greater mass fraction of PM10–2.5 than PM2.5–1.0. Also as expected, the mass fraction of iron-containing particles was substantially less in PM10–2.5 than in PM2.5–1.0. Results of this study are consistent with known emission sources in the area and with previous studies, which showed high concentrations of iron-containing particles in the subway compared to outdoor sites. Thus, passive sampling with CCSEM-EDX offers an inexpensive means to assess PM2.5–1.0 and PM10-2.5 simultaneously and by composition at multiple locations. PMID:25689348

  5. On the origin and variability of suspended particulate matter (PM1, PM2.5 and PM10) concentrations in Cyprus.

    NASA Astrophysics Data System (ADS)

    Pikridas, Michael; Vrekoussis, Mihalis; Mihalopoulos, Nikolaos; Kizas, Christos; Savvides, Chrysanthos; Sciare, Jean

    2017-04-01

    The Eastern Mediterranean (EM) lies at the crossroad of three different continents (Europe, Asia, and Africa). EM is a densely populated region including several cities with 3M inhabitants or more (e.g. Athens, Istanbul, Izmir, and Cairo). It has been identified as the most polluted area in Europe with respect to particulate matter (PM) mainly due to the combination of high photochemical activity, which causes pollutants to oxidize and partitioning in the particle phase, with the elevated pollutants emissions from neighboring regions. In addition, the proximity to Africa and the Middle East allows frequent transport of dust particles. At the center of the Eastern Mediterranean lies the island of Cyprus, which has received very little attention regarding its PM levels despite being the location in Europe most frequently impacted by air masses from the Middle East. Herewith, we present a historical PM archive that spans 2 decades. It involves ongoing monitoring on a daily basis of particulate matter with diameters smaller than 10 μm (PM10), 2.5 μm (PM2.5), and 1 μm (PM1) conducted in at least one, of the 12 currently existing air quality stations in Cyprus since 1997, 2005, and 2009, respectively. The most extended PM datasets correspond a) to the Agia Marina Xyliatou (AMX) monitoring station established at a remote area at the foothills of mount Troodos and b) that of the inland capital, Nicosia. Based on this long-term dataset, the diurnal, temporal and annual variability is assessed. Prior to 2010, PM10 concentration at all sites remained relatively constant, but at different levels, violating the annual EU legislated PM10 limit of 40 μg m-3. Since 2010, coarse mode levels have decreased at all sites. The reported decrease was equal to 30% at AMX. As a result, since 2010 the observed levels comply with the EU legislation threshold. Satellite observations of Aerosol Optical Thickness (AOT) Moderate Resolution Imaging Spectroradiometer (MODIS) onboard NASA

  6. Cell-Specific Oxidative Stress and Cytotoxicity after Wildfire Coarse Particulate Matter Instillation into Mouse Lung

    PubMed Central

    Williams, Keisha M.; Franzi, Lisa M.; Last, Jerold A.

    2012-01-01

    Our previous work has shown that coarse particulate matter (PM10-2.5) from wildfire smoke is more toxic to lung macrophages on an equal dose (by mass) basis than coarse PM isolated from normal ambient air, as evidenced by decreased numbers of macrophages in lung lavage fluid 6 and 24 hours after PM instillation into mouse lungs in vivo and by cytotoxicity to a macrophage cell line observed directly in vitro. We hypothesized that pulmonary macrophages from mice instilled with wildfire coarse PM would undergo more cytotoxicity than macrophages from controls, and that there would be an increase in oxidative stress in their lungs. Cytotoxicity was quantified as decreased viable macrophages and increased percentages of dead macrophages in the bronchoalveolar lavage fluid (BALF) of mice instilled with wildfire coarse PM. At one hour after PM instillation, we observed both decreased numbers of viable macrophages and increased dead macrophage percentages as compared to controls. An increase in free isoprostanes, an indicator of oxidative stress, from control values of 28.1±3.2 pg/mL to 83.9±12.2 pg/mL was observed a half-hour after PM instillation. By one hour after PM instillation, isoprostane values had returned to 30.4±7.6pg/mL, not significantly different from control concentrations. Lung sections from mice instilled with wildfire coarse PM showed rapid Clara cell responses, with decreased intracellular staining for the Clara cell secretory protein CCSP 1 hour after wildfire PM instillation. In conclusion, very rapid cytotoxicity occurs in pulmonary macrophages and oxidative stress responses are seen 0.5-1 hour after wildfire coarse PM instillation. These results define early cellular and biochemical events occurring in vivo and support the hypothesis that oxidative stress-mediated macrophage toxicity plays a key role in the initial response of the mouse lung to wildfire PM exposure. PMID:23142465

  7. Cell-specific oxidative stress and cytotoxicity after wildfire coarse particulate matter instillation into mouse lung.

    PubMed

    Williams, Keisha M; Franzi, Lisa M; Last, Jerold A

    2013-01-01

    Our previous work has shown that coarse particulate matter (PM(10-2.5)) from wildfire smoke is more toxic to lung macrophages on an equal dose (by mass) basis than coarse PM isolated from normal ambient air, as evidenced by decreased numbers of macrophages in lung lavage fluid 6 and 24hours after PM instillation into mouse lungs in vivo and by cytotoxicity to a macrophage cell line observed directly in vitro. We hypothesized that pulmonary macrophages from mice instilled with wildfire coarse PM would undergo more cytotoxicity than macrophages from controls, and that there would be an increase in oxidative stress in their lungs. Cytotoxicity was quantified as decreased viable macrophages and increased percentages of dead macrophages in the bronchoalveolar lavage fluid (BALF) of mice instilled with wildfire coarse PM. At 1hour after PM instillation, we observed both decreased numbers of viable macrophages and increased dead macrophage percentages as compared to controls. An increase in free isoprostanes, an indicator of oxidative stress, from control values of 28.1±3.2pg/mL to 83.9±12.2pg/mL was observed a half-hour after PM instillation. By 1hour after PM instillation, isoprostane values had returned to 30.4±7.6pg/mL, not significantly different from control concentrations. Lung sections from mice instilled with wildfire coarse PM showed rapid Clara cell responses, with decreased intracellular staining for the Clara cell secretory protein CCSP 1hour after wildfire PM instillation. In conclusion, very rapid cytotoxicity occurs in pulmonary macrophages and oxidative stress responses are seen 0.5-1hour after wildfire coarse PM instillation. These results define early cellular and biochemical events occurring in vivo and support the hypothesis that oxidative stress-mediated macrophage toxicity plays a key role in the initial response of the mouse lung to wildfire PM exposure. Copyright © 2012 Elsevier Inc. All rights reserved.

  8. Assessment of dioxin-like activity in PM10 air samples from an industrial location in Algeria, using the DRE-CALUX bioassay.

    PubMed

    Khedidji, Sidali; Croes, Kim; Yassaa, Noureddine; Ladji, Riad; Denison, Michael S; Baeyens, Willy; Elskens, Marc

    2017-05-01

    When compared to the European guidelines, PM 10 (particulate matter up to 10-μm size) concentrations in Algeria are often exceeding the maximum limits, and in general, no information exists on the compounds bound on its surface. The objective of this study was to measure the dioxin-like activity of polychlorinated dibenzodioxines and dibenzofurans (PCDD/Fs) and dioxin-like polychlorinated biphenyls (PCBs) in the PM 10 fraction at the Sour El Ghozlane cement plant in Algeria. PM 10 samples (n = 23) were taken between 24 March and 15 April 2013, using a medium volume sampler and 47-mm PTFE filters. The 24-h samples were dried to determine the PM 10 content and afterward extracted, cleaned up, and analyzed with the dioxin-responsive element-chemical-activated luciferase gene expression (DRE-CALUX) bioassay. Our results showed that the measured bioanalytical equivalents (BEQs) were similar to those in other international industrial sites worldwide. The PCDD/Fs and dioxin-like PCBs (dl-PCBs) were positively correlated (rho = 0.6, p = 0.002), indicating that they have similar sources. Furthermore, samples from March showed higher PCDD/F and dl-PCB BEQs and humidity but lower temperatures compared to samples from April, while there was no difference in the PM 10 concentrations between the two months. These results reveal that PM 10 alone is not a good proxy and that meteorological conditions are an important factor in assessing dioxin-like pollution in the atmosphere. It seems that, at present, there is no health hazard through direct airborne human exposure to dioxin-like pollutants in PM 10 from this site. However, it is important to monitor these POPs for a longer period of time and also to gain more insight in their distribution between the particulate and gas phase in relation to meteorological conditions.

  9. Cell-specific oxidative stress and cytotoxicity after wildfire coarse particulate matter instillation into mouse lung

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Williams, Keisha M.; Franzi, Lisa M.; Last, Jerold A., E-mail: jalast@ucdavis.edu

    2013-01-01

    Our previous work has shown that coarse particulate matter (PM{sub 10-2.5}) from wildfire smoke is more toxic to lung macrophages on an equal dose (by mass) basis than coarse PM isolated from normal ambient air, as evidenced by decreased numbers of macrophages in lung lavage fluid 6 and 24 hours after PM instillation into mouse lungs in vivo and by cytotoxicity to a macrophage cell line observed directly in vitro. We hypothesized that pulmonary macrophages from mice instilled with wildfire coarse PM would undergo more cytotoxicity than macrophages from controls, and that there would be an increase in oxidative stressmore » in their lungs. Cytotoxicity was quantified as decreased viable macrophages and increased percentages of dead macrophages in the bronchoalveolar lavage fluid (BALF) of mice instilled with wildfire coarse PM. At 1 hour after PM instillation, we observed both decreased numbers of viable macrophages and increased dead macrophage percentages as compared to controls. An increase in free isoprostanes, an indicator of oxidative stress, from control values of 28.1 ± 3.2 pg/mL to 83.9 ± 12.2 pg/mL was observed a half-hour after PM instillation. By 1 hour after PM instillation, isoprostane values had returned to 30.4 ± 7.6 pg/mL, not significantly different from control concentrations. Lung sections from mice instilled with wildfire coarse PM showed rapid Clara cell responses, with decreased intracellular staining for the Clara cell secretory protein CCSP 1 hour after wildfire PM instillation. In conclusion, very rapid cytotoxicity occurs in pulmonary macrophages and oxidative stress responses are seen 0.5–1 hour after wildfire coarse PM instillation. These results define early cellular and biochemical events occurring in vivo and support the hypothesis that oxidative stress-mediated macrophage toxicity plays a key role in the initial response of the mouse lung to wildfire PM exposure. -- Highlights: ► We studied very early events (0.5–1 hour

  10. Effects of coarse chalk dust particles (2.5-10 μm) on respiratory burst and oxidative stress in alveolar macrophages.

    PubMed

    Zhang, Yuexia; Yang, Zhenhua; Feng, Yan; Li, Ruijin; Zhang, Quanxi; Geng, Hong; Dong, Chuan

    2015-08-01

    The main aim of the present study was to examine in vitro responses of rat alveolar macrophages (AMs) exposed to coarse chalk dust particles (particulate matter in the size range 2.5-10 μm, PM(coarse)) by respiratory burst and oxidative stress. Chalk PM(coarse)-induced respiratory burst in AMs was measured by using a luminol-dependent chemiluminescence (CL) method. Also, the cell viability; lactate dehydrogenase (LDH) release; levels of cellular superoxide dismutase (SOD), catalase (CAT), glutathione (GSH), malondialdehyde (MDA), and acid phosphatase (ACP); plasma membrane ATPase; and extracellular nitric oxide (NO) level were determined 4 h following the treatment with the different dosages of chalk PM(coarse). The results showed that chalk PM(coarse) initiated the respiratory burst of AMs as indicated by strong CL, which was inhibited by diphenyleneiodonium chloride and L-N-nitro-L-arginine methyl ester hydrochloride. It suggested that chalk PM(coarse) induced the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS) in AMs. This hypothesis was confirmed by the fact that chalk PM(coarse) resulted in a significant decrease of intracellular SOD, GSH, ACP, and ATPase levels and a notable increase of intracellular CAT, MDA content, and extracellular NO level, consequently leading to a decrease of the cell viability and a increase of LDH release. It was concluded that AMs exposed to chalk PM(coarse) can suffer from cytotoxicity which may be mediated by generation of excessive ROS/RNS. Graphical Abstract The possible mechanism of coarse chalk particles-induced adverse effects in AMs.

  11. Variability of aerosols and chemical composition of PM10, PM2.5 and PM1 on a platform of the Prague underground metro

    NASA Astrophysics Data System (ADS)

    Cusack, M.; Talbot, N.; Ondráček, J.; Minguillón, M. C.; Martins, V.; Klouda, K.; Schwarz, J.; Ždímal, V.

    2015-10-01

    Measurements of PM10, PM2.5 and PM1 and particle number concentration and size distribution were measured for 24 h on a platform of the Prague underground metro in October 2013. The three PM fractions were analysed for major and minor elements, secondary inorganic aerosols (SIA) and total carbon (TC). Measurements were performed both when the metro was inoperative and closed to the public (referred to as background), and when the metro was in operation and open to passengers. PM concentrations were elevated during both periods, but were substantially increased in the coarse fraction during hours when the metro was in operation. Average PM concentrations were 214.8, 93.9 and 44.8 μg m-3 for PM10, PM2.5 and PM1, respectively (determined gravimetrically). Average particle number concentrations were 8.5 × 103 cm-3 for background hours and 11.5 × 103 cm-3 during operational hours. Particle number concentrations were found to not vary as significantly as PM concentrations throughout the day. Variations in PM were strongly governed by passing trains, with highest concentrations recorded during rush hour. When trains were less frequent, PM concentrations were shown to fluctuate in unison with the entrance and exit of trains (as shown by wind velocity measured on the platform). PM was found to be highly enriched with iron, especially in the coarse fraction, comprising 46% of PM10 (98.9 μg m-3). This reduces to 6.7 μg m-3 during background hours, proving that the trains themselves were the main source of iron, most probably from wheel-rail mechanical abrasion. Other enriched elements relative to background hours included Ba, Cu, Mn, Cr, Mo, Ni and Co, among others. Many of these elements exhibited a similar size distribution, further indicating their sources were common and were attributed to train operations.

  12. Personal Coarse Particulate Matter Exposures in an Adult Cohort

    EPA Science Inventory

    Volunteers associated with the North Carolina Adult Asthma and Environment Study (NCAAES) participated in an investigation of personal daily exposures to coarse and fine particulate matter size fractions (PM10-2.5, PM2.5). Data from these personal measuremen...

  13. Trace metal content in inhalable particulate matter (PM2.5-10 and PM2.5) collected from historical mine waste deposits using a laboratory-based approach.

    PubMed

    Martin, Rachael; Dowling, Kim; Pearce, Dora C; Florentine, Singarayer; McKnight, Stafford; Stelcer, Eduard; Cohen, David D; Stopic, Attila; Bennett, John W

    2017-06-01

    Mine wastes and tailings are considered hazardous to human health because of their potential to generate large quantities of highly toxic emissions of particulate matter (PM). Human exposure to As and other trace metals in PM may occur via inhalation of airborne particulates or through ingestion of contaminated dust. This study describes a laboratory-based method for extracting PM 2.5-10 (coarse) and PM 2.5 (fine) particles from As-rich mine waste samples collected from an historical gold mining region in regional, Victoria, Australia. We also report on the trace metal and metalloid content of the coarse and fine fraction, with an emphasis on As as an element of potential concern. Laser diffraction analysis showed that the proportions of coarse and fine particles in the bulk samples ranged between 3.4-26.6 and 0.6-7.6 %, respectively. Arsenic concentrations were greater in the fine fraction (1680-26,100 mg kg -1 ) compared with the coarse fraction (1210-22,000 mg kg -1 ), and Co, Fe, Mn, Ni, Sb and Zn were found to be present in the fine fraction at levels around twice those occurring in the coarse. These results are of particular concern given that fine particles can accumulate in the human respiratory system. Our study demonstrates that mine wastes may be an important source of metal-enriched PM for mining communities.

  14. Feasibility of using low-cost portable particle monitors for measurement of fine and coarse particulate matter in urban ambient air.

    PubMed

    Han, Inkyu; Symanski, Elaine; Stock, Thomas H

    2017-03-01

    Exposure to ambient particulate matter (PM) is known as a significant risk factor for mortality and morbidity due to cardiorespiratory causes. Owing to increased interest in assessing personal and community exposures to PM, we evaluated the feasibility of employing a low-cost portable direct-reading instrument for measurement of ambient air PM exposure. A Dylos DC 1700 PM sensor was collocated with a Grimm 11-R in an urban residential area of Houston Texas. The 1-min averages of particle number concentrations for sizes between 0.5 and 2.5 µm (small size) and sizes larger than 2.5 µm (large size) from a DC 1700 were compared with the 1-min averages of PM 2.5 (aerodynamic size less than 2.5 µm) and coarse PM (aerodynamic size between 2.5 and 10 µm) concentrations from a Grimm 11-R. We used a linear regression equation to convert DC 1700 number concentrations to mass concentrations, utilizing measurements from the Grimm 11-R. The estimated average DC 1700 PM 2.5 concentration (13.2 ± 13.7 µg/m 3 ) was similar to the average measured Grimm 11-R PM 2.5 concentration (11.3 ± 15.1 µg/m 3 ). The overall correlation (r 2 ) for PM 2.5 between the DC 1700 and Grimm 11-R was 0.778. The estimated average coarse PM concentration from the DC 1700 (5.6 ± 12.1 µg/m 3 ) was also similar to that measured with the Grimm 11-R (4.8 ± 16.5 µg/m 3 ) with an r 2 of 0.481. The effects of relative humidity and particle size on the association between the DC 1700 and the Grimm 11-R results were also examined. The calculated PM mass concentrations from the DC 1700 were close to those measured with the Grimm 11-R when relative humidity was less than 60% for both PM 2.5 and coarse PM. Particle size distribution was more important for the association of coarse PM between the DC 1700 and Grimm 11-R than it was for PM 2.5 . The performance of a low-cost particulate matter (PM) sensor was evaluated in an urban residential area. Both PM 2.5 and coarse PM (PM 10-2.5 ) mass concentrations

  15. CONCENTRATED COARSE AIR PARTICLE EXPOSURE PRODUCES MILD TOXICOLOGICAL EFFECTS IN HEALTHY VOLUNTEERS

    EPA Science Inventory

    Epidemiological studies have shown that the adverse health effects of ambient particulate matter (PM) exposure to be in general more strongly associated with "fine" PM (<2.5 µM) originating from combustion processes than for "coarse" PM (>2.5 µM) from wind-blown dust, mechanical ...

  16. Spatial and temporal variations of the concentrations of PM10, PM2.5 and PM1 in China

    NASA Astrophysics Data System (ADS)

    Wang, Y. Q.; Zhang, X. Y.; Sun, J. Y.; Zhang, X. C.; Che, H. Z.; Li, Y.

    2015-06-01

    Concentrations of PM10, PM2.5 and PM1 were monitored at 24 stations of CAWNET (China Atmosphere Watch Network) from 2006 to 2014 using GRIMM 180 dust monitors. The highest particulate matter (PM) concentrations were observed at the stations of Xian, Zhengzhou and Gucheng, in Guanzhong and the Hua Bei Plain (HBP). The second highest PM concentrations were observed in northeast China, followed by southern China. According to the latest air quality standards of China, 14 stations reached the PM10 standard and only 7 stations, mainly rural and remote stations, reached the PM2.5 standard. The PM2.5 and PM10 ratios showed a clear increasing trend from northern to southern China, because of the substantial contribution of coarse mineral aerosol in northern China. The PM1 and PM2.5 ratios were higher than 80% at most stations. PM concentrations tended to be highest in winter and lowest in summer at most stations, and mineral dust impacts influenced the results in spring. A decreasing interannual trend was observed in the HBP and southern China from 2006 to 2014, but an increasing trend occurred at some stations in northeast China. Also diurnal variations of PM concentrations and meteorological factors effects were investigated.

  17. Composition and Sources of Fine and Coarse Particles Collected during 2002–2010 in Boston, MA

    PubMed Central

    Masri, Shahir; Kang, Choong-Min; Koutrakis, Petros

    2016-01-01

    Identifying the sources, composition, and temporal variability of fine (PM2.5) and coarse (PM2.5-10) particles is a crucial component in understanding PM toxicity and establishing proper PM regulations. In this study, a Harvard Impactor was used to collect daily integrated fine and coarse particle samples every third day for nine years at a single site in Boston, MA. A total of 1,960 filters were analyzed for elements, black carbon (BC), and total PM mass. Positive Matrix Factorization (PMF) was used to identify source types and quantify their contributions to ambient PM2.5 and PM2.5-10. BC and 17 elements were identified as the main constituents in our samples. Results showed that BC, S, and Pb were associated exclusively with the fine particle mode, while 84% of V and 79% of Ni were associated with this mode. Elements mostly found in the coarse mode, over 80%, included Ca, Mn (road dust), and Cl (sea salt). PMF identified six source types for PM2.5 and three source types for PM2.5-10. Source types for PM2.5 included regional pollution, motor vehicles, sea salt, crustal/road dust, oil combustion, and wood burning. Regional pollution contributed the most, accounting for 48% of total PM2.5 mass, followed by motor vehicles (21%) and wood burning (19%). Source types for PM2.5-10 included crustal/road dust (62%), motor vehicles (22%), and sea salt (16%). A linear decrease in PM concentrations with time was observed for both fine (−5.2%/yr) and coarse (−3.6%/yr) particles. The fine-mode trend was mostly related to oil combustion and regional pollution contributions. Average PM2.5 concentrations peaked in summer (10.4 μg/m3) while PM2.5-10 concentrations were lower and demonstrated little seasonal variability. The findings of this study show that PM25 is decreasing more sharply than PM2.5-10 over time. This suggests the increasing importance of PM2.5-10 and traffic-related sources for PM exposure and future policies. PMID:25947125

  18. TEMPORAL-SPATIAL ANALYSIS OF U.S.- MEXICO BORDER ENVIRONMENTAL FINE AND COARSE PM AIR SAMPLE EXTRACT ACTIVITY IN HUMAN BRONCHIAL EPITHELIAL CELLS

    PubMed Central

    Lauer, Fredine T.; Mitchell, Leah A.; Bedrick, Edward; McDonald, Jacob D.; Lee, Wen-Yee; Li, Wen-Whai; Olvera, Hector; Amaya, Maria A.; Berwick, Marianne; Gonzales, Melissa; Currey, Robert; Pingitore, Nicholas E.; Burchiel, Scott W.

    2009-01-01

    Particulate matter less than 10 μm (PM10) has been shown to be associated with aggravation of asthma and respiratory and cardiopulmonary morbidity. There is also great interest in the potential health effects of PM 2.5. Particulate matter (PM) varies in composition both spatially and temporally depending on the source, location and seasonal condition. El Paso County which lies in the Paso del Norte airshed is a unique location to study ambient air pollution due to three major points: the geological land formation, the relatively large population and the various sources of PM. In this study, dichotomous filters were collected from various sites in El Paso County every seven days for a period of one year. The sampling sites were both distant and near border crossings, which are near heavily populated areas with high traffic volume. Fine (PM2.5) and Coarse (PM10-2.5) PM filter samples were extracted using dichloromethane and were assessed for biologic activity and polycyclic aromatic (PAH) content. Three sets of marker genes human BEAS2B bronchial epithelial cells were utilized to assess the effects of airborne PAHs on biologic activities associated with specific biological pathways associated with airway diseases. These pathways included in inflammatory cytokine production (IL-6, IL-8), oxidative stress (HMOX-1, NQO-1, ALDH3A1, AKR1C1), and aryl hydrocarbon receptor (AhR)-dependent signaling (CYP1A1). Results demonstrated interesting temporal and spatial patterns of gene induction for all pathways, particularly those associated with oxidative stress, and significant differences in the PAHs detected in the PM10-2.5 and PM 2.5 fractions. Temporally, the greatest effects on gene induction were observed in winter months, which appeared to correlate with inversions that are common in the air basin. Spatially, the greatest gene expression increases were seen in extracts collected from the central most areas of El Paso which are also closest to highways and border

  19. Estimating the acute health effects of coarse particulate matter accounting for exposure measurement error.

    PubMed

    Chang, Howard H; Peng, Roger D; Dominici, Francesca

    2011-10-01

    In air pollution epidemiology, there is a growing interest in estimating the health effects of coarse particulate matter (PM) with aerodynamic diameter between 2.5 and 10 μm. Coarse PM concentrations can exhibit considerable spatial heterogeneity because the particles travel shorter distances and do not remain suspended in the atmosphere for an extended period of time. In this paper, we develop a modeling approach for estimating the short-term effects of air pollution in time series analysis when the ambient concentrations vary spatially within the study region. Specifically, our approach quantifies the error in the exposure variable by characterizing, on any given day, the disagreement in ambient concentrations measured across monitoring stations. This is accomplished by viewing monitor-level measurements as error-prone repeated measurements of the unobserved population average exposure. Inference is carried out in a Bayesian framework to fully account for uncertainty in the estimation of model parameters. Finally, by using different exposure indicators, we investigate the sensitivity of the association between coarse PM and daily hospital admissions based on a recent national multisite time series analysis. Among Medicare enrollees from 59 US counties between the period 1999 and 2005, we find a consistent positive association between coarse PM and same-day admission for cardiovascular diseases.

  20. Ambient exposure to coarse and fine particle emissions from building demolition

    NASA Astrophysics Data System (ADS)

    Azarmi, Farhad; Kumar, Prashant

    2016-07-01

    Demolition of buildings produce large quantities of particulate matter (PM) that could be inhaled by on-site workers and people living in the neighbourhood, but studies assessing ambient exposure at the real-world demolition sites are limited. We measured concentrations of PM10 (≤10 μm), PM2.5 (≤2.5 μm) and PM1 (≤1 μm) along with local meteorology for 54 working hours over the demolition period. The measurements were carried out at (i) a fixed-site in the downwind of demolished building, (ii) around the site during demolition operation through mobile monitoring, (iii) different distances away from the demolition site through sequential monitoring, and (iv) inside an excavator vehicle cabin and on-site temporary office for engineers. Position of the PM instrument was continuously recorded using a Global Positioning System on a second basis during mobile measurements. Fraction of coarse particles (PM2.5-10) contributed 89 (with mean particle mass concentration, PMC ≈ 133 ± 17 μg m-3), 83 (100 ± 29 μg m-3), and 70% (59 ± 12 μg m-3) of total PMC during the fixed-site, mobile monitoring and sequential measurements, respectively, compared with only 50% (mean 12 ± 6 μg m-3) during the background measurements. The corresponding values for fine particles (PM2.5) were 11, 17 and 30% compared with 50% during background, showing a much greater release of coarse particles during demolition. The openair package in R and map source software (ArcGIS) were used to assess spatial variation of PMCs in downwind and upwind of the demolition site. A modified box model was developed to determine the emission factors, which were 210, 73 and 24 μg m-2 s-1 for PM10, PM2.5 and PM1, respectively. The average respiratory deposited doses to coarse (and fine) particles inside the excavator cabin and on-site temporary office increased by 57- (and 5-) and 13- (and 2-) times compared with the local background level, respectively. The monitoring stations in downwind direction

  1. Coarse particle (PM10-2.5) source profiles for emissions from domestic cooking and industrial process in Central India.

    PubMed

    Bano, Shahina; Pervez, Shamsh; Chow, Judith C; Matawle, Jeevan Lal; Watson, John G; Sahu, Rakesh Kumar; Srivastava, Anjali; Tiwari, Suresh; Pervez, Yasmeen Fatima; Deb, Manas Kanti

    2018-06-15

    To develop coarse particle (PM 10-2.5 , 2.5 to 10μm) chemical source profiles, real-world source sampling from four domestic cooking and seven industrial processing facilities were carried out in "Raipur-Bhilai" of Central India. Collected samples were analysed for 32 chemical species including 21 elements (Al, As, Ca, Cd, Co, Cr, Cu, Fe, Hg, K, Mg, Mn, Mo, Na, Ni, Pb, S, Sb, Se, V, and Zn) by atomic absorption spectrophotometry (AAS), 8 water-soluble ions (Na + , K + , Mg 2+ , Ca 2+ , Cl - , F - , NO 3 - , and SO 4 2- ) by ion chromatography, ammonium (NH 4 + ) by spectrophotometry, and carbonaceous fractions (OC and EC) by thermal/optical transmittance. The carbonaceous fractions were most abundant fraction in household fuel and municipal solid waste combustion emissions while elemental species were more abundant in industrial emissions. Most of the elemental species were enriched in PM 2.5 (<2.5μm) size fraction as compared to the PM 10-2.5 fraction. Abundant Ca (13-28%) was found in steel-rolling mill (SRM) and cement production industry (CPI) emissions, with abundant Fe (14-32%) in ferro-manganese (FEMNI), steel production industry (SPI), and electric-arc welding emissions. High coefficients of divergence (COD) values (0.46 to 0.88) among the profiles indicate their differences. These region-specific source profiles are more relevant to source apportionment studies in India than profiles measured elsewhere. Copyright © 2018. Published by Elsevier B.V.

  2. Partitioning of magnetic particles in PM10, PM2.5 and PM1 aerosols in the urban atmosphere of Barcelona (Spain).

    PubMed

    Revuelta, María Aránzazu; McIntosh, Gregg; Pey, Jorge; Pérez, Noemi; Querol, Xavier; Alastuey, Andrés

    2014-05-01

    A combined magnetic-chemical study of 15 daily, simultaneous PM10-PM2.5-PM1 urban background aerosol samples has been carried out. The magnetic properties are dominated by non-stoichiometric magnetite, with highest concentrations seen in PM10. Low temperature magnetic analyses showed that the superparamagnetic fraction is more abundant when coarse, multidomain particles are present, confirming that they may occur as an oxidized outer shell around coarser grains. A strong association of the magnetic parameters with a vehicular PM10 source has been identified. Strong correlations found with Cu and Sb suggests that this association is related to brake abrasion emissions rather than exhaust emissions. For PM1 the magnetic remanence parameters are more strongly associated with crustal sources. Two crustal sources are identified in PM1, one of which is of North African origin. The magnetic particles are related to this source and so may be used to distinguish North African dust from other sources in PM1. Copyright © 2014 Elsevier Ltd. All rights reserved.

  3. Hemodynamic, Autonomic, and Vascular Effects of Exposure to Coarse Particulate Matter Air Pollution from a Rural Location

    PubMed Central

    Bard, Robert L.; Morishita, Masako; Dvonch, J. Timothy; Wang, Lu; Yang, Hui-yu; Spino, Catherine; Mukherjee, Bhramar; Kaplan, Mariana J.; Yalavarthi, Srilakshmi; Oral, Elif A.; Ajluni, Nevin; Sun, Qinghua; Harkema, Jack; Rajagopalan, Sanjay

    2014-01-01

    Background: Fine particulate matter (PM) air pollution is associated with numerous adverse health effects, including increased blood pressure (BP) and vascular dysfunction. Coarse PM substantially contributes to global air pollution, yet differs in characteristics from fine particles and is currently not regulated. However, the cardiovascular (CV) impacts of coarse PM exposure remain largely unknown. Objectives: Our goal was to elucidate whether coarse PM, like fine PM, is itself capable of eliciting adverse CV responses. Methods: We performed a randomized double-blind crossover study in which 32 healthy adults (25.9 ± 6.6 years of age) were exposed to concentrated ambient coarse particles (CAP; 76.2 ± 51.5 μg/m3) in a rural location and filtered air (FA) for 2 hr. We measured CV outcomes during, immediately after, and 2 hr postexposures. Results: Both systolic (mean difference = 0.32 mmHg; 95% CI: 0.05, 0.58; p = 0.021) and diastolic BP (0.27 mmHg; 95% CI: 0.003, 0.53; p = 0.05) linearly increased per 10 min of exposure during the inhalation of coarse CAP when compared with changes during FA exposure. Heart rate was on average higher (4.1 bpm; 95% CI: 3.06, 5.12; p < 0.0001) and the ratio of low-to-high frequency heart rate variability increased (0.24; 95% CI: 0.07, 0.41; p = 0.007) during coarse particle versus FA exposure. Other outcomes (brachial flow-mediated dilatation, microvascular reactive hyperemia index, aortic hemodynamics, pulse wave velocity) were not differentially altered by the exposures. Conclusions: Inhalation of coarse PM from a rural location is associated with a rapid elevation in BP and heart rate during exposure, likely due to the triggering of autonomic imbalance. These findings add mechanistic evidence supporting the biological plausibility that coarse particles could contribute to the triggering of acute CV events. Citation: Brook RD, Bard RL, Morishita M, Dvonch JT, Wang L, Yang HY, Spino C, Mukherjee B, Kaplan MJ, Yalavarthi S, Oral

  4. Seasonal variability of PM2.5 and PM10 composition and sources in an urban background site in Southern Italy.

    PubMed

    Cesari, D; De Benedetto, G E; Bonasoni, P; Busetto, M; Dinoi, A; Merico, E; Chirizzi, D; Cristofanelli, P; Donateo, A; Grasso, F M; Marinoni, A; Pennetta, A; Contini, D

    2018-01-15

    Comparison of fine and coarse fractions in terms of sources and dynamics is scarce in southeast Mediterranean countries; differences are relevant because of the importance of natural sources like sea spray and Saharan dust advection, because most of the monitoring networks are limited to PM 10 . In this work, the main seasonal variabilities of sources and processes involving fine and coarse PM (particulate matter) were studied at the Environmental-Climate Observatory of Lecce (Southern Italy). Simultaneous PM 2.5 and PM 10 samples were collected between July 2013 and July 2014 and chemically analysed to determine concentrations of several species: OC (organic carbon) and EC (elemental carbon) via thermo-optical analysis, 9 major ions via IC, and 23 metals via ICP-MS. Data was processed through mass closure analysis and Positive Matrix Factorization (PMF) receptor model characterizing seasonal variabilities of nine sources contributions. Organic and inorganic secondary aerosol accounts for 43% of PM 2.5 and 12% of PM 2.5-10 with small seasonal changes. SIA (secondary inorganic aerosol) seasonal pattern is opposite to that of SOC (secondary organic carbon). SOC is larger during the cold period, sulphate (the major contributor to SIA) is larger during summer. Two forms of nitrate were identified: NaNO 3 , correlated with chloride depletion and aging of sea-spray, mainly present in PM 2.5-10 ; NH 4 NO 3 more abundant in PM 2.5 . Biomass burning is a relevant source with larger contribution during autumn and winter because of the influence of domestic heating, however, is not negligible in spring and summer, because of the contributions of fires and agricultural practices. Mass closure analysis and PMF results identify two soil sources: crustal associated to long range transport and carbonates associated to local resuspended dust. Both sources contributes to the coarse fraction and have different dynamics with crustal source contributing mainly in high winds from SE

  5. Source identification of coarse particles in the Desert Southwest, USA using Positive Matrix Factorization

    EPA Science Inventory

    The Desert Southwest Coarse Particulate Matter Study was undertaken to further our understanding of the spatial and temporal variability and sources of fine and coarse particulate matter (PM) in rural, arid, desert environments. Sampling was conducted between February 2009 and Fe...

  6. AMBIENT COARSE PARTICULATE MATTER ASSOCIATED WITH PLASMINOGEN AND FIBRIOGEN LEVELS IN ADULT ASTHMATICS

    EPA Science Inventory

    Introduction: Recent reports indicate that the elderly and those with cardiovascular disease are susceptible to fine and coarse particulate matter (PM 2.5, PM 2.5-10) exposures. Asthmatics are thought to be primarily affected via airway inflammation. We investigated whether mark...

  7. Non-exhaust emissions of PM and the efficiency of emission reduction by road sweeping and washing in the Netherlands.

    PubMed

    Keuken, Menno; Denier van der Gon, Hugo; van der Valk, Karin

    2010-09-15

    From research on PM(2.5) and PM(10) in 2007/2008 in the Netherlands, it was concluded that the coarse fraction (PM(2.5-10)) attributed 60% and 50% respectively, to the urban-regional and street-urban increments of PM(10). Contrary to Scandinavian and Mediterranean countries which exhibit significant seasonal variation in the coarse fraction of particulate matter (PM), in the Netherlands the coarse fraction in PM at a street location is rather constant during the year. Non-exhaust emissions by road traffic are identified as the main source for coarse PM in urban areas. Non-exhaust emissions mainly originate from re-suspension of accumulated deposited PM and road wear related particles, while primary tire and brake wear hardly contribute to the mass of non-exhaust emissions. However, tire and brake wear can clearly be identified in the total mass through the presence of the heavy metals: zinc, a tracer for tire wear and copper, a tracer for brake wear. The efficiency of road sweeping and washing to reduce non-exhaust emissions in a street-canyon in Amsterdam was investigated. The increments of the coarse fraction at a kerbside location and a housing façade location versus the urban background were measured at days with and without sweeping and washing. It was concluded that this measure did not significantly reduce non-exhaust emissions. Copyright 2010 Elsevier B.V. All rights reserved.

  8. Residential indoor and outdoor coarse particles and associated endotoxin exposures

    NASA Astrophysics Data System (ADS)

    Wheeler, Amanda J.; Dobbin, Nina A.; Lyrette, Ninon; Wallace, Lance; Foto, Mark; Mallick, Ranjeeta; Kearney, Jill; Van Ryswyk, Keith; Gilbert, Nicolas L.; Harrison, Ian; Rispler, Kathleen; Héroux, Marie-Eve

    2011-12-01

    There is a growing body of evidence demonstrating that coarse particles (PM 10-2.5) have detrimental impacts upon health, especially for respiratory effects. There are limited data available for indoor residential exposures. Some data exist regarding the composition of this PM size fraction with emphasis on crustal elements and biological components. This study includes data from 146 homes sampled in Regina, Saskatchewan (SK) where 5-day integrated concurrent monitoring of indoor and outdoor coarse particles was conducted during the winter and summer of 2007. The coarse particle filters were subsequently analysed for endotoxin content to determine the contribution of this compound. Winter indoor geometric mean concentrations of coarse particles exceeded outdoor concentrations (3.73 μg m -3 vs 2.49 μg m -3; paired t-test p < 0.0001); however the reverse was found in summer (4.34 μg m -3 vs 8.82 μg m -3; paired t-test p < 0.0001). Linear regression indicated that winter predictors of indoor coarse particles were outdoor coarse particles, ventilation and presence of at least two or more occupants. During the summer, increased use of central air conditioning was associated with reduced coarse particles, while smoking and the presence of two or more occupants resulted in increased coarse particles. Endotoxin concentrations (EU μg -1) were lower indoors than outdoors in both seasons. Spatial variability of ambient coarse particles was assessed to determine the suitability of using a single monitoring station within a city to estimate exposure. The coefficients of variation between homes sampled simultaneously and the central monitoring station were calculated (median COV in summer = 15% and winter = 24%) and showed significant variability by week, especially during the summer months, suggesting a single site may be insufficient for characterizing exposure. Future studies should consider daily measurements per home to understand shorter term exposures and day to day

  9. Dust episodes in Beirut and their effect on the chemical composition of coarse and fine particulate matter.

    PubMed

    Jaafar, Malek; Baalbaki, Rima; Mrad, Raya; Daher, Nancy; Shihadeh, Alan; Sioutas, Constantinos; Saliba, Najat A

    2014-10-15

    Particles captured during dust episodes in Beirut originated from both the African and Arabian deserts. This particular air mixture showed an increase, over non-dust episodes, in particle volume distribution which was mostly noticed for particles ranging in sizes between 2.25 and 5 μm. It also resulted in an increase in average mass concentration by 48.5% and 14.6%, for the coarse and fine fractions, respectively. Chemical analysis of major aerosol components accounted for 93% of fine PM and 71% of coarse PM. Crustal material (CM) dominated the coarse PM fraction, contributing to 39 ± 15% of the total mass. Sea salt (SS) (11 ± 10%) and secondary ions (SI) (11 ± 7%) were the second most abundant elements. In the fine fraction, SI (36 ± 14%) were the most abundant PM constituent, followed by organic matter (OM) (33 ± 7%) and CM (13 ± 2%). Enrichment factors (EF) and correlation coefficients show that biogenic and anthropogenic sources contribute to the elemental composition of particles during dust episodes. This study emphasizes on the role played by the long-range transport of aerosols in changing the chemical composition of the organic and inorganic constituents of urban coarse and fine PM. The chemical reactions between aged urban and dust aerosols are enhanced during transport, leading to the formation of organo-nitrogenated and -sulfonated compounds. Their oligomeric morphologies are further confirmed by SEM-EDX measurements. Copyright © 2014 Elsevier B.V. All rights reserved.

  10. DEVELOPMENT AND EVALUATION OF A HIGH-VOLUME DICHOTOMOUS SAMPLER FOR CHEMICAL SPECIATION OF COARSE AND FINE PARTICLES

    EPA Science Inventory

    This paper describes the development and field evaluation of a compact high-volume dichotomous sampler (HVDS) that collects coarse (PM10-2.5) and fine (PM2.5) particulate matter. In its primary configuration as tested, the sampler size-fractionates PM10 into...

  11. Chemical characterization of size-segregated PM from different public transport modes and implications of source specific contribution to public exposure.

    PubMed

    Jiang, Sabrina Yanan; Gali, Nirmal Kumar; Yang, Fenhuan; Zhang, Junke; Ning, Zhi

    2017-08-01

    To investigate the chemical properties of particulate matter (PM) in different public transport microenvironments in Hong Kong, the coarse (2.5-10 μm) and fine (<2.5 μm) PM samples were collected in three different types of transport modes including Mass Transit Railway (MTR)-Aboveground (AG), MTR Underground (UG), and Bus routes from October 2013 to April 2014. Average PM 2.5 concentrations through UG, AG, and Bus routes were 47.9, 86.8, and 43.8 μg m -3 , respectively, whereas the coarse PM concentrations were 4-5 folds less. The PM 2.5 total metal concentrations of AG route were 2.3 and 3.7 times of UG and BUS routes, respectively, compared to those in the other two routes. The most abundant metals at three stations in PM 2.5 and coarse PM were quite similar and mainly generated by frictional processes of wheels, rails, and brakes of the system as well as by the mechanical wearing of these parts. The most abundant PAH in three routes in PM 2.5 was ATRQN, followed by 2-MNA, and the sum of them contributed to 35 and 42% of total PAHs in coarse PM and PM 2.5 , respectively. Crude oils, lubricant oil, diesel emissions would be the major sources of PAHs from MTR aboveground stations. The relative abundance of the n-alkanes among different samples was similar to the PAHs and the carbon preference index (CPI) values of the whole n-alkanes range were consistently from 0.99 to 1.04 among all samples indicating the significant contribution from the vehicle exhaust and fossil fuel burning. The concentrations of hopanes and steranes were higher in PM 2.5 than in coarse PM due to diesel and coal burning. These results may provide a unique opportunity to investigate source specific contribution of the PM pollutants to the commuter exposure in public transport.

  12. Wintertime vertical variations in particulate matter (PM) and precursor concentrations in the San Joaquin Valley during the California Regional Coarse PM/Fine PM Air Quality Study.

    PubMed

    Brown, Steven G; Roberts, Paul T; McCarthy, Michael C; Lurmann, Frederick W; Hyslop, Nicole P

    2006-09-01

    Air quality monitoring was conducted at a rural site with a tower in the middle of California's San Joaquin Valley (SJV) and at elevated sites in the foothills and mountains surrounding the SJV for the California Regional PM10/ PM2.5 Air Quality Study. Measurements at the surface and n a tower at 90 m were collected in Angiola, CA, from December 2000 through February 2001 and included hourly black carbon (BC), particle counts from optical particle counters, nitric oxide, ozone, temperature, relative humidity, wind speed, and direction. Boundary site measurements were made primarily using 24-hr integrated particulate matter (PM) samples. These measurements were used to understand the vertical variations of PM and PM precursors, the effect of stratification in the winter on concentrations and chemistry aloft and at the surface, and the impact of aloft-versus-surface transport on PM concentrations. Vertical variations of concentrations differed among individual species. The stratification may be important to atmospheric chemistry processes, particularly nighttime nitrate formation aloft, because NO2 appeared to be oxidized by ozone in the stratified aloft layer. Additionally, increases in accumulation-mode particle concentrations in the aloft layer during a fine PM (PM2.5) episode corresponded with increases in aloft nitrate, demonstrating the likelihood of an aloft nighttime nitrate formation mechanism. Evidence of local transport at the surface and regional transport aloft was found; transport processes also varied among the species. The distribution of BC appeared to be regional, and BC was often uniformly mixed vertically. Overall, the combination of time-resolved tower and surface measurements provided important insight into PM stratification, formation, and transport.

  13. Evaluation of a Direct Personal Coarse Particulate Matter Monitor

    EPA Science Inventory

    One aspect of the North Carolina Adult Asthma and Environment study (NCAAES) was to evaluate personal exposures to coarse particulate matter (PM 10-2.5) and their associated variability. As part of this, we examined the ability of a community-based monitor to act as...

  14. Source characterization of fine and coarse particles at the East Mediterranean coast

    NASA Astrophysics Data System (ADS)

    Mamane, Yaacov; Perrino, Cinzia; Yossef, Osnat; Catrambone, Maria

    Fine and coarse atmospheric particles were collected in Ashdod—a midsize industrial city on the southeastern Mediterranean coast, and in Gedera—a rural site, to characterize ambient particles and to determine their long-range transport during two major seasons—winter and summer. Manual PM2.5 and PM10 samplers, dichotomous samplers, continuous automated PM10 samplers, and denuders were used to sample particulate and gaseous pollutants. Fine and coarse concentrations in Ashdod were 21.2 and 39.6 μg m -3, and 23.9 and 30.5 μg m -3 in the fall-winter and summer campaigns, respectively. Crustal material, as calcites or dolomites mixed with silicates, dominated the coarse fraction and also the fine fraction on dusty days. In the fall-winter, S, P, and Ni were coupled with minerals. Coarse Ni was associated with crustal material during dust storms, while P originated from shipping and deposition of phosphates in the urban area around. Sulfates dominated the fine fractions in the summer season averaging 12 μg m -3. Multivariate analysis indicated that S was associated with As and Se, V and Ni, both associated with heavy fuel combustion, and Zn and Pb. In winter, those mixed sources were local, but in summer they were part of long-range transport. In the fall-winter, Zn and Pb were strongly associated with Mn, Ga, and Cu—elements emitted from either traffic or metal processing plants. Although the influence of crustal material on both size fractions was significant, most heavy metals were associated with PM2.5. Higher concentrations were linked to a larger number of particles in this fraction, to a larger surface area available for biochemical reaction [Harrison, R., Shi, J., Xi, S., Khan, A., Mark, D., Kinnersley, R., Yin, J., Philos, T., 2000. Measurement of number, mass and size distribution of particles in the atmosphere. Philosophical Transactions of the Royal Society 358, 2567-2579], and finally to a larger concern in regards to health effects.

  15. Influence of rain on the abundance of bioaerosols in fine and coarse particles

    NASA Astrophysics Data System (ADS)

    Rathnayake, Chathurika M.; Metwali, Nervana; Jayarathne, Thilina; Kettler, Josh; Huang, Yuefan; Thorne, Peter S.; O'Shaughnessy, Patrick T.; Stone, Elizabeth A.

    2017-02-01

    Assessing the environmental, health, and climate impacts of bioaerosols requires knowledge of their size and abundance. These two properties were assessed through daily measurements of chemical tracers for pollens (sucrose, fructose, and glucose), fungal spores (mannitol and glucans), and Gram-negative bacterial endotoxins in two particulate matter (PM) size modes: fine particles (< 2.5 µm) and coarse particles (2.5-10 µm) as determined by their aerodynamic diameter. Measurements were made during the spring tree pollen season (mid-April to early May) and late summer ragweed season (late August to early September) in the Midwestern US in 2013. Under dry conditions, pollen, and fungal spore tracers were primarily in coarse PM (> 75 %), as expected for particles greater than 2.5 µm. Rainfall on 2 May corresponded to maximum atmospheric pollen tracer levels and a redistribution of pollen tracers to the fine PM fraction (> 80 %). Both changes were attributed to the osmotic rupture of pollen grains that led to the suspension of fine-sized pollen fragments. Fungal spore tracers peaked in concentration following spring rain events and decreased in particle size, but to a lesser extent than pollens. A short, heavy thunderstorm in late summer corresponded to an increase in endotoxin and glucose levels, with a simultaneous shift to smaller particle sizes. Simultaneous increase in bioaerosol levels and decrease in their size have significant implications for population exposures to bioaerosols, particularly during rain events. Chemical mass balance (CMB) source apportionment modeling and regionally specific pollen profiles were used to apportion PM mass to pollens and fungal spores. Springtime pollen contributions to the mass of particles < 10 µm (PM10) ranged from 0.04 to 0.8 µg m-3 (0.2-38 %, averaging 4 %), with maxima occurring on rainy days. Fungal spore contributions to PM10 mass ranged from 0.1 to 1.5 µg m-3 (0.8-17 %, averaging 5 %), with maxima occurring after

  16. Near-road enhancement and solubility of fine and coarse ...

    EPA Pesticide Factsheets

    Communities near major roadways are disproportionately affected by traffic-related air pollution which can contribute to adverse health outcomes. The specific role of particulate matter (PM) from traffic sources is not fully understood due to complex emissions processes and physical/chemical properties of PM in the near-road environment. To investigate the spatial profile and water solubility of elemental PM species near a major roadway, filter-based measurements of fine (PM2.5) and coarse (PM10-2.5) PM were simultaneously collected at multiple distances (10 m, 100 m, and 300 m) from Interstate I-96 in Detroit, Michigan during September–November 2010. Filters were extracted in water, followed by a hot acid extraction, and analyzed by magnetic sector field high resolution inductively coupled plasma mass spectrometry (HR-ICPMS) to quantify water-soluble and acid-soluble trace elements for each PM size fraction. PM2.5 and PM10-2.5 species measured in the near-road samples included elements associated with traffic activity, local industrial sources, and regional pollution. Metals indicative of brake wear (Ba, Cu) were dramatically enriched near the roadway during downwind conditions (factor of 5 concentration increase), with the largest increase within 100 m of the roadway. Moderate near-roadway increases were observed for crustal elements and other traffic-related PM (Fe, Ca), and the lowest increases observed for regional PM species (S). Water solubility varied

  17. Spatial and Temporal Variability of Outdoor Coarse Particulate Matter Mass Concentrations Measured with a New Coarse Particulate Sampler during the Detroit Exposure and Aerosol Research Study

    EPA Science Inventory

    The Detroit Exposure and Aerosol Research Study (DEARS) provided data to compare outdoor residential coarse particulate matter (PM10-2.5) concentrations in six different areas of Detroit with data from a central monitoring site. Daily and seasonal influences on the spa...

  18. Coarse particles and hospital admissions due to respiratory diseases in children. An ecological time series study.

    PubMed

    César, Ana Cristina Gobbo; Nascimento, Luiz Fernando

    2018-06-25

    Exposure to particulate matter (PM) is associated with hospitalizations due to respiratory diseases among children. An ecological time series study was carried out to identify the role of coarse fractions of particulate matter (PM10-2.5) in hospitalizations among children up to 10 years of age, in Piracicaba (SP) in the year 2015. A generalized additive model of Poisson regression was used to estimate the risk of hospitalization due to acute laryngitis and tracheitis, pneumonia, bronchitis, bronchiolitis and asthma. Lags of 0 to 7 days were considered, and the model was adjusted for the temperature and relative humidity of the air and controlled for short and long-term exposure. Proportional attributable ratios, population-attributable fractions and hospital costs were calculated with increasing concentrations of these pollutants. 638 hospitalizations were evaluated during this period, with a mean of 1.75 cases per day (standard deviation, SD = 1.86). The daily averages were 22.45 µg/m3 (SD = 13.25) for the coarse fraction (PM10-2.5) and 13.32 µg/m3 (SD = 6.38) for the fine fraction. Significant risks of PM10-2.5 exposure were only observed at lag 0, with relative risk (RR) = 1.012, and at lag 6, with RR = 1.011. An increase of 5 µg/m3 in the coarse fraction concentration implied an increase in the relative risk of hospitalizations of up to 4.8%, with an excess of 72 hospitalizations and excess expenditure of US$ 17,000 per year. This study showed the impact of coarse-fraction exposure on hospital admissions among children due to respiratory diseases.

  19. MULTI-SITE FIELD EVALUATION OF CANDIDATE SAMPLERS FOR MEASURING COARSE-MODE PM

    EPA Science Inventory

    In response to expected changes to the National Ambient Air Quality Standards for particulate matter, comprehensive field studies were conducted to evaluate the performance of sampling methods for measuring coarse mode aerosols (i.e. PMc). Five separate PMc sampling approaches w...

  20. Chemical Characterization of Ambient Coarse Particulate Matter in Rural Areas of Arizona Impacted by Significant Population Growth

    EPA Science Inventory

    Characterization of PMc is critical to the understanding of recently observed adverse health effects (e.g., asthma, reduced cardiac variability, etc) from coarse particles in ambient air. PMc mass an (PMc, particles between PM2.5 and PM10) in a rural area of increasing populati...

  1. Ambient fine and coarse particulate matter pollution and respiratory morbidity in Dongguan, China.

    PubMed

    Zhao, Yiju; Wang, Shengyong; Lang, Lingling; Huang, Caiyan; Ma, Wenjun; Lin, Hualiang

    2017-03-01

    We estimated the short-term effects of particulate matter (PM) pollution with aerodynamic diameters ≤2.5 μm (PM 2.5 ) and between 2.5 and 10 μm (PM c ) on hospital outpatient visits due to overall and specific respiratory diseases, as well as the associated morbidity burden in Dongguan, a subtropical city in South China. A time-series model with quasi-Poisson link was used to examine the association between PM pollution and morbidities from respiratory diseases, COPD, asthma and pneumonia in Dongguan during 2013-2015. We further estimated the morbidity burden (population attributable fraction and attributable morbidity) due to ambient PM pollution. A total of 44,801 hospital outpatient visits for respiratory diseases were recorded during the study period. Both PM 2.5 and PM c were found to be significantly associated with morbidity of overall respiratory diseases, COPD, and asthma. An IQR (interquartile range) increase in PM 2.5 at lag 03 day was associated with 15.41% (95% CI: 10.99%, 20.01%) increase in respiratory morbidity, and each IQR increase in PM c at lag 03 corresponded to 7.24% (95% CI: 4.25%, 10.32%) increase in respiratory morbidity. We did not find significant effects of PM 2.5 and PM c on pneumonia. Using WHO's guideline (25 μg/m 3 ) as reference concentration, about 8.32% (95% CI: 5.90%, 10.86%) of respiratory morbidity (3727, 95% CI: 2642, 4867, in morbidity number) were estimated to be attributed to PM 2.5 , and 0.86% (95% CI: 0.50%, 1.23%) of respiratory morbidity, representing 385 (95% CI: 225, 551) hospital outpatient visits, could be attributed to coarse particulate pollutant. Our study suggests that both fine and coarse particulate pollutants are an important trigger of hospital outpatient visits for respiratory diseases, and account for substantial respiratory morbidity in Dongguan, China. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. Development of a continuous monitoring system for PM10 and components of PM2.5.

    PubMed

    Lippmann, M; Xiong, J Q; Li, W

    2000-01-01

    While particulate matter with aerodynamic diameters below 10 and 2.5 microns (PM10 and PM2.5) correlate with excess mortality and morbidity, there is evidence for still closer epidemiological associations with sulfate ion, and experimental exposure-response studies suggest that the hydrogen ion and ultrafine (PM0.15) concentrations may be important risk factors. Also, there are measurement artifacts in current methods used to measure ambient PM10 and PM2.5, including negative artifacts because of losses of sampled semivolatile components (ammonium nitrate and some organics) and positive artifacts due to particle-bound water. To study such issues, we are developing a semi-continuous monitoring system for PM10, PM2.5, semivolatiles (organic compounds and NH4NO3), particle-bound water, and other PM2.5 constituents that may be causal factors. PM10 is aerodynamically sorted into three size-fractions: (1) coarse (PM10-PM2.5); (2) accumulation mode (PM2.5-PM0.15); and (3) ultrafine (PM0.15). The mass concentration of each fraction is measured in terms of the linear relation between accumulated mass and pressure drop on polycarbonate pore filters. The PM0.15 mass, being highly correlated with the ultrafine number concentration, provides a good index of the total number concentration in ambient air. For the accumulation mode (PM2.5-PM0.15), which contains nearly all of the semivolatiles and particle-bound water by mass, aliquots of the aerosol stream flow into system components that continuously monitor sulfur (by flame photometry), ammonium and nitrate (by chemiluminescence following catalytic transformations to NO), organics (by thermal-optical analysis) and particle-bound water (by electrolytic hygrometer after vacuum evaporation of sampled particles). The concentration of H+ can be calculated (by ion balance using the monitoring data on NO3-, NH4+, and SO4=).

  3. EVALUATION OF THE SMPS-APS SYSTEM AS A CONTINUOUS MONITOR FOR MEASURING PM2.5, PM10 AND COARSE (PM2.5-10) CONCENTRATIONS. (R827352C011)

    EPA Science Inventory

    Respirable particulate matter (PM) has been linked to mortality and morbidity by a variety of epidemiological studies. This research has led to the creation of a new PM standard for particles with diameters <2.5 μm (PM2.5). Since the conclusion of these studie...

  4. Chemical mass balance source apportionment of fine and PM10 in the Desert Southwest, USA

    EPA Science Inventory

    The Desert Southwest Coarse Particulate Matter Study was undertaken in Pinal County, Arizona, to better understand the origin and impact of sources of fine and coarse particulate matter (PM) in rural, arid regions of the U.S. southwestern desert. The desert southwest experiences ...

  5. PASSIVE AEROSOL SAMPLER FOR PM 10-2.5

    EPA Science Inventory

    This is an extended abstract of a presentation made at the Air and Waste Management Association's Symposium on Air Quality Measurement Methods and Technology, Durham, NC, May 9-11, 2006. The abstract describes the application of a passive aerosol sampler for coarse PM characteriz...

  6. Comparison of gene expression profiles induced by coarse, fine, and ultrafile particulate matter

    EPA Science Inventory

    Coarse, fine, and ultrafine particulate matter (PM) fractions possess different physical properties and chemical compositions and may produce different adverse health effects. Studies were undertaken to determine whether or not gene expression patterns may be used to discriminate...

  7. Genotoxicity of fine and coarse fraction ambient particulate matter in immortalised normal (TT1) and cancer‐derived (A549) alveolar epithelial cells

    PubMed Central

    Enlo‐Scott, Zachary; Nagy, Eszter; Mudway, Ian S.; Tetley, Teresa D.; Arlt, Volker M.; Phillips, David H.; Gollapudi, B.

    2018-01-01

    Human exposure to airborne particulate matter (PM) is associated with adverse cardiopulmonary health effects, including lung cancer. Ambient PM represents a heterogeneous mixture of chemical classes including transition metals, polycyclic aromatic hydrocarbons (PAHs) and their derivatives such as nitro‐PAHs, many of which are classified as putative carcinogens. As the primary site of human exposure to PM is the lungs, we investigated the response of two alveolar epithelial cell lines, the tumour‐derived A549 and newly described TT1 cells, to fine and coarse PM collected from background and roadside locations. We show that coarse PM elicits a genotoxic response in the TT1 cells, with the strongest signal associated with the background sample. This response could be recapitulated using the organic extract derived from this sample. No responses were observed in PM‐challenged A549 cells. Fine PM failed to elicit a genotoxic response in either cell line despite the higher PAH concentrations within this fraction. Consistent with the lack of a simplistic association between PM PAH content and the observed genotoxic response, TT1 cells treated with benzo[a]pyrene (BaP) demonstrated no increase in the selected markers. In contrast, a pattern of response was observed in TT1 cells challenged with 3‐nitrobenzanthrone (3‐NBA) similar to that with coarse PM. Together, these data illustrated the suitability of the TT1 cell line for assessing PM‐induced genotoxicity and challenge the contention that fine roadside PM poses the higher cancer risk. Furthermore, the response to 3‐NBA and not BaP suggests a major contribution of nitro‐PAHs to the overall toxicity of PM. Environ. Mol. Mutagen. 59:290–301, 2018. © 2018 The Authors Environmental and Molecular Mutagenesis published by Wiley Periodicals, Inc. on behalf of Environmental Mutagen Society PMID:29368350

  8. MULTI-SITE EVALUATIONS OF CANDIDATE METHODOLOGIES FOR DETERMINING COARSE PARTICULATE MATTER (PMC) CONCENTRATIONS

    EPA Science Inventory

    Comprehensive field studies were conducted to evaluate the performance of sampling methods for measuring the coarse fraction of PM10 in ambient air. Five separate sampling approaches were evaluated at each of three sampling sites. As the primary basis of comparison, a discret...

  9. MULTI-SITE EVALUATIONS OF CANDIDATE METHODOLOGIES FOR DETERMINING COARSE PARTICULATE MATTER (PMC) CONCENTRATIONS

    EPA Science Inventory

    Comprehensive field studies were conducted to evaluate the performance of sampling methods for measuring the coarse fraction of PM10 in ambient air. Five separate sampling approaches were evaluated at each of three sampling sites. As the primary basis of comparison, a discrete ...

  10. Chemical characterization and mass closure of PM10 and PM2.5 at an urban site in Karachi - Pakistan

    NASA Astrophysics Data System (ADS)

    Shahid, Imran; Kistler, Magdalena; Mukhtar, Azam; Ghauri, Badar M.; Ramirez-Santa Cruz, Carlos; Bauer, Heidi; Puxbaum, Hans

    2016-03-01

    A mass balance method is applied to assess main source contributions to PM2.5 and PM10 levels in Karachi. Carbonaceous species (elemental carbon, organic carbon, carbonate carbon), soluble ions (Ca++, Mg++, Na+, K+, NH4+, Cl-, NO3-, SO4-), saccharides (levoglucosan, galactosan, mannosan, sucrose, fructose, glucose, arabitol and mannitol) were determined in atmospheric fine (PM2.5) and coarse (PM10) aerosol samples collected under pre-monsoon conditions (March-April 2009) at an urban site in Karachi (Pakistan). The concentrations of PM2.5 and PM10 were found to be 75 μg/m3 and 437 μg/m3 respectively. The large difference between PM10 and PM2.5 originated predominantly from mineral dust. "Calcareous dust" and "siliceous dust" were the over all dominating material in PM, with 46% contribution to PM2.5 and 78% to PM10-2.5. Combustion particles and secondary organics (EC + OM) comprised 23% of PM2.5 and 6% of PM10-2.5. EC, as well as OC ambient levels were higher (59% and 56%) in PM10-2.5 than in PM2.5. Biomass burning contributed about 3% to PM2.5, and had a share of about 13% of ;EC + OM; in PM2.5. The impact of bioaerosol (fungal spores) was minor and had a share of 1 and 2% of the OC in the PM2.5 and PM10-2.5 size fractions. In case of secondary inorganic aerosols, ammonium sulphate (NH4)2SO4 contributes 4.4% to PM2.5 and no detectable quantity were found in fraction PM10-2.5. The sea salt contribution is about 2% both to PM2.5 and PM10-2.5.

  11. Temporal variations of fine and coarse particulate matter sources in Jeddah, Saudi Arabia.

    PubMed

    Lim, Chris C; Thurston, George D; Shamy, Magdy; Alghamdi, Mansour; Khoder, Mamdouh; Mohorjy, Abdullah M; Alkhalaf, Abdulrahman K; Brocato, Jason; Chen, Lung Chi; Costa, Max

    2018-02-01

    This study provides the first comprehensive analysis of the seasonal variations and weekday/weekend differences in fine (aerodynamic diameter <2.5 μm; PM 2.5 ) and coarse (aerodynamic diameter 2.5-10 μm; PM 2.5-10 ) particulate matter mass concentrations, elemental constituents, and potential source origins in Jeddah, Saudi Arabia. Air quality samples were collected over 1 yr, from June 2011 to May 2012 at a frequency of three times per week, and analyzed. The average mass concentrations of PM 2.5 (21.9 μg/m 3 ) and PM 10 (107.8 μg/m 3 ) during the sampling period exceeded the recommended annual average levels by the World Health Organization (WHO) for PM 2.5 (10 μg/m 3 ) and PM 10 (20 μg/m 3 ), respectively. Similar to other Middle Eastern locales, PM 2.5-10 is the prevailing mass component of atmospheric particulate matter at Jeddah, accounting for approximately 80% of the PM 10 mass. Considerations of enrichment factors, absolute principal component analysis (APCA), concentration roses, and backward trajectories identified the following source categories for both PM 2.5 and PM 2.5-10 : (1) soil/road dust, (2) incineration, and (3) traffic; and for PM 2.5 only, (4) residual oil burning. Soil/road dust accounted for a major portion of both the PM 2.5 (27%) and PM 2.5-10 (77%) mass, and the largest source contributor for PM 2.5 was from residual oil burning (63%). Temporal variations of PM 2.5-10 and PM 2.5 were observed, with the elevated concentration levels observed for mass during the spring (due to increased dust storm frequency) and on weekdays (due to increased traffic). The predominant role of windblown soil and road dust in both the PM 2.5 and PM 2.5-10 masses in this city may have implications regarding the toxicity of these particles versus those in the Western world where most PM health assessments have been made in the past. These results support the need for region-specific epidemiological investigations to be conducted and considered in future

  12. The direct influence of ship traffic on atmospheric PM2.5, PM10 and PAH in Venice.

    PubMed

    Contini, D; Gambaro, A; Belosi, F; De Pieri, S; Cairns, W R L; Donateo, A; Zanotto, E; Citron, M

    2011-09-01

    The direct influence of ship traffic on atmospheric levels of coarse and fine particulate matter (PM(2.5), PM(10)) and fifteen polycyclic aromatic hydrocarbons (PAHs) has been estimated in the urban area of Venice. Data analysis has been performed on results collected at three sites over the summer, when ship traffic is at a maximum. Results indicate that monitoring of the PM daily concentrations is not sufficiently detailed for the evaluation of this contribution, even though it could be useful for specific markers such as PAHs. Therefore a new methodology, based on high temporal resolution measurements coupled with wind direction information and the database of ship passages of the Harbour Authority of Venice has been developed. The sampling sites were monitored with optical detectors (DustTrack(®) and Mie pDR-1200) operating at a high temporal resolution (20s and 1s respectively) for PM(2.5) and PM(10). PAH in the particulate and gas phases were recovered from quartz fibre filters and polyurethane foam plugs using pressurised solvent extraction, the extracts were then analysed by gas chromatography- high-resolution mass spectrometry. Our results shows that the direct contribution of ships traffic to PAHs in the gas phase is 10% while the contribution to PM(2.5) and to PM(10) is from 1% up to 8%. Copyright © 2011 Elsevier Ltd. All rights reserved.

  13. MULTI-SITE PERFORMANCE EVALUATIONS OF CANDIDATE METHODOLOGIES FOR DETERMINING COARSE PARTICULATE MATTER (PMC) CONCENTRATIONS

    EPA Science Inventory

    Comprehensive field studies were conducted to evaluate the performance of sampling methods for measuring the coarse fraction of PM10 in ambient air. Five separate sampling approaches were evaluated at each of three sampling sites. As the primary basis of comparison, a discret...

  14. Mass concentration and elemental composition of indoor PM 2.5 and PM 10 in University rooms in Thessaloniki, northern Greece

    NASA Astrophysics Data System (ADS)

    Gemenetzis, Panagiotis; Moussas, Panagiotis; Arditsoglou, Anastasia; Samara, Constantini

    The mass concentration and the elemental composition of PM 2.5 and PM 10 were measured in 40 rooms (mainly offices or mixed office-lab rooms, and photocopying places) of the Aristotle University of Thessaloniki, northern Greece. A total of 27 major, minor and trace elements were determined by ED-XRF analysis. The PM 2.5/PM 10 concentration ratios averaged 0.8±0.2, while the corresponding elemental ratios ranged between 0.4±0.2 and 0.9±0.2. The concentrations of PM 2.5 and PM 10 were significantly higher (by 70% and 50%, respectively) in the smokers' rooms compared to the non-smokers' places. The total elemental concentrations were also higher in the smokers' rooms (11.5 vs 8.2 μg m -3 for PM 2.5, and 10.3 vs 7.6 μg m -3 for PM 2.5-10). Fine particle concentrations (PM 2.5) were found to be quite proportional to smoking strength. On the contrary, the two environments exhibited similar coarse (PM 2.5-10) particle fractions not related to the number of cigarettes smoked. A slight decrease of particle concentrations with increasing the floor level was also observed, particularly for PM 2.5, suggesting that high-level floors are less impacted by near ground-level sources like traffic emissions. Finally, the removal efficiency of air purification systems was evaluated.

  15. Coarse particulate matter concentrations from residential outdoor sites associated with the North Carolina Asthma and Children's Environment Studies (NC-ACES)

    NASA Astrophysics Data System (ADS)

    Chen, Fu-Lin; Williams, Ronald; Svendsen, Erik; Yeatts, Karin; Creason, John; Scott, James; Terrell, Dock; Case, Martin

    Coarse particulate matter (PM 10) concentration data from residential outdoor sites were collected using portable samplers as part of an exposure assessment for the North Carolina Asthma and Children's Environment Studies (NC-ACES). PM 10 values were estimated using the differential between independent PM 10 and PM 2.5 collocated MiniVol measurements. Repeated daily 24-h integrated PM 10 and PM 2.5 residential outdoor monitoring was performed at a total of 26 homes during September 2003-June 2004 in the Research Triangle Park, NC area. This effort resulted in the collection of 73 total daily measurements. This assessment was conducted to provide data needed to investigate the association of exposures to coarse particle PM mass concentrations with observed human health effects. Potential instrument bias between the differential MiniVol methodology and a dichotomous sampler were investigated. Results indicated that minimal bias of PM 10 mass concentration estimates (slope = 0.8, intercept =0.36μg m -3) existed between the dichotomous and differential MiniVol procedures. Residential outdoor PM 10 mass concentrations were observed to be highly variable across measurement days and ranged from 1.1 to 12.6μg m -3 (mean of 5.4μg m -3). An average correlation coefficient of r=0.75 existed between residential outdoor PM 10 mass concentrations and those obtained from the central ambient monitoring site. Temporal and spatial variability of PM 10 mass concentrations during the study were observed and are described in this report.

  16. The CCRUSH study: Characterization of coarse and fine particulate matter in northeastern Colorado

    NASA Astrophysics Data System (ADS)

    Clements, Nicholas Steven

    Particulate matter in the troposphere adversely impacts human health when inhaled and alters climate through cloud formation processes and by absorbing/scattering light. Particles smaller than 2.5 mum in diameter (fine particulate matter; PM2.5), are typically emitted from combustion-related sources and can form and grow through secondary processing in the atmosphere. Coarse particles (PM10-2.5), ranging 2.5 to 10 mum, are typically generated through abrasive processes, such as erosion of road surfaces, entrained via resuspension, and settle quickly out of the atmosphere due to their large size. After deciding against regulating PM10-2.5 in 2006 citing, among other reasons, mixed results from epidemiological studies of the pollutant and lack of knowledge on health impacts in rural areas, the United States Environmental Protection Agency (US EPA) funded a series of studies that investigated the ambient composition, toxicology, and epidemiology of PM10-2.5. One such study, The Colorado Coarse Rural-Urban Sources and Health (CCRUSH) study, aimed to characterize the composition, sources, and health effects of PM10-2.5 in semi-arid northeastern Colorado and consisted of two field campaigns and an epidemiological study. Summarized here are the results from the two field campaigns, the first of which included over three years of continuous PM10-2.5 and PM2.5 mass concentration monitoring at multiple sites in urban-Denver and rural-Greeley, Colorado. This data set was used to characterize the spatiotemporal variability of PM10-2.5 and PM2.5. During the second year of continuous monitoring, PM 10-2.5 and PM2.5 filter samples were collected for compositional analyses that included: elemental composition, bulk elemental and organic carbon concentrations, water-soluble organic carbon concentrations, UV-vis absorbance, fluorescence spectroscopy, and endotoxin content. Elemental composition was used to understand enrichment of trace elements in atmospheric particles and to

  17. Evaluation of coarse and fine particles in diverse Indian environments.

    PubMed

    George, K V; Patil, Dinakar D; Anil, Mulukutla N V; Kamal, Neel; Alappat, Babu J; Kumar, Prashant

    2017-02-01

    The estimates of airborne fine particle (PM 2.5 ) concentrations are possible through rigorous empirical correlations based on the monitored PM 10 data. However, such correlations change depending on the nature of sources in diverse ambient environments and, therefore, have to be environment specific. Studies presenting such correlations are limited but needed, especially for those areas, where PM 2.5 is not routinely monitored. Moreover, there are a number of studies focusing on urban environments but very limited for coal mines and coastal areas. The aim of this study is to comprehensively analyze the concentrations of both PM 10 and PM 2.5 and develop empirical correlations between them. Data from 26 different sites spread over three distinct environments, which are a relatively clean coastal area, two coal mining areas, and a highly urbanized area in Delhi were used for the study. Distributions of PM in the 0.43-10-μm size range were measured using eight-stage cascade impactors. Regression analysis was used to estimate the percentage of PM 2.5 in PM 10 across distinct environments for source identification. Relatively low percentage of PM 2.5 concentrations (21, 28, and 32%) in PM 10 were found in clean coastal and two mining areas, respectively. Percentage of PM 2.5 concentrations in PM 10 in the highly urbanized area of Delhi was 51%, indicating a presence of a much higher percentage of fine particles due to vehicular combustion in Delhi. The findings of this work are important in estimating concentrations of much harmful fine particles from coarse particles across distinct environments. The results are also useful in source identification of particulates as differences in the percentage of PM 2.5 concentrations in PM 10 can be attributed to characteristics of sources in the diverse ambient environments.

  18. Investigation of the relative fine and coarse mode aerosol loadings and properties in the Southern Arabian Gulf region

    NASA Astrophysics Data System (ADS)

    Kaku, Kathleen C.; Reid, Jeffrey S.; Reid, Elizabeth A.; Ross-Langerman, Kristy; Piketh, Stuart; Cliff, Steven; Al Mandoos, Abdulla; Broccardo, Stephen; Zhao, Yongjing; Zhang, Jianglong; Perry, Kevin D.

    2016-03-01

    The aerosol chemistry environment of the Arabian Gulf region is extraordinarily complex, with high concentrations of dust aerosols from surrounding deserts mixed with anthropogenic aerosols originating from a large petrochemical industry and pockets of highly urbanized areas. Despite the high levels of aerosols experienced by this region, little research has been done to explore the chemical composition of both the anthropogenic and mineral dust portion of the aerosol burden. The intensive portion of the United Arab Emirates Unified Aerosol Experiment (UAE2), conducted during August and September 2004 was designed in part to resolve the aerosol chemistry through the use of multiple size-segregated aerosol samplers. The coarse mode mass (derived by subtracting the PM2.5 aerosol mass from the PM10 mass) is largely dust at 76% ± 7% of the total coarse mode mass, but is significantly impacted by anthropogenic pollution, primarily sulfate and nitrate. The PM2.5 aerosol mass also contains a large dust burden, at 38% ± 26%, but the anthropogenic component dominates. The total aerosol burden has significant impact not only on the atmosphere, but also the local population, as the air quality levels for both the PM10 and PM2.5 aerosol masses reached unhealthy levels for 24% of the days sampled.

  19. Monitoring of PM10 and PM2.5 around primary particulate anthropogenic emission sources

    NASA Astrophysics Data System (ADS)

    Querol, Xavier; Alastuey, Andrés; Rodriguez, Sergio; Plana, Felicià; Mantilla, Enrique; Ruiz, Carmen R.

    Investigations on the monitoring of ambient air levels of atmospheric particulates were developed around a large source of primary anthropogenic particulate emissions: the industrial ceramic area in the province of Castelló (Eastern Spain). Although these primary particulate emissions have a coarse grain-size distribution, the atmospheric transport dominated by the breeze circulation accounts for a grain-size segregation, which results in ambient air particles occurring mainly in the 2.5-10 μm range. The chemical composition of the ceramic particulate emissions is very similar to the crustal end-member but the use of high Al, Ti and Fe as tracer elements as well as a peculiar grain-size distribution in the insoluble major phases allow us to identify the ceramic input in the bulk particulate matter. PM2.5 instead of PM10 monitoring may avoid the interference of crustal particles without a major reduction in the secondary anthropogenic load, with the exception of nitrate. However, a methodology based in PM2.5 measurement alone is not adequate for monitoring the impact of primary particulate emissions (such as ceramic emissions) on air quality, since the major ambient air particles derived from these emissions are mainly in the range of 2.5-10 μm. Consequently, in areas characterised by major secondary particulate emissions, PM2.5 monitoring should detect anthropogenic particulate pollutants without crustal particulate interference, whereas PM10 measurements should be used in areas with major primary anthropogenic particulate emissions.

  20. Effect of three extraction techniques on submitochondrial particle and Microtox bioassays for airborne particulate matter.

    PubMed

    Torres-Pérez, Mónica I; Jiménez-Velez, Braulio D; Mansilla-Rivera, Imar; Rodríguez-Sierra, Carlos J

    2005-03-01

    The effect that three extraction techniques (e.g., Soxhlet, ultrasound and microwave-assisted extraction) have on the toxicity, as measured by submitochondrial particle (SMP) and Microtox assays, of organic extracts was compared from three sources of airborne particulate matter (APM). The extraction technique influenced the toxicity response of APM extracts and it was dependent on the bioassay method, and APM sample source. APM extracts from microwave-assisted extraction (MAE) were similar or more toxic than the conventional extraction techniques of Soxhlet and ultrasound, thus, providing an alternate extraction method. The microwave extraction technique has the advantage of using less solvent volume, less extraction time, and the capacity to simultaneously extract twelve samples. The ordering of APM toxicity was generally urban dust > diesel dust > PM10 (particles with diameter < 10 microm), thus, reflecting different chemical composition of the samples. This study is the first to report the suitability of two standard in-vitro bioassays for the future toxicological characterization of APM collected from Puerto Rico, with the SMP generally showing better sensitivity to the well-known Microtox bioassay.

  1. High time-resolved elemental components in fine and coarse particles in the Pearl River Delta region of Southern China: Dynamic variations and effects of meteorology.

    PubMed

    Zhou, Shengzhen; Davy, Perry K; Wang, Xuemei; Cohen, Jason Blake; Liang, Jiaquan; Huang, Minjuan; Fan, Qi; Chen, Weihua; Chang, Ming; Ancelet, Travis; Trompetter, William J

    2016-12-01

    Hourly-resolved PM 2.5 and PM 10-2.5 samples were collected in the industrial city Foshan in the Pearl River Delta region, China. The samples were subsequently analyzed for elemental components and black carbon (BC). A key purpose of the study was to understand the composition of particulate matter (PM) at high-time resolution in a polluted urban atmosphere to identify key components contributing to extreme PM concentration events and examine the diurnal chemical concentration patterns for air quality management purposes. It was found that BC and S concentrations dominated in the fine mode, while elements with mostly crustal and oceanic origins such as Si, Ca, Al and Cl were found in the coarse size fraction. Most of the elements showed strong diurnal variations. S did not show clear diurnal variations, suggesting regional rather than local origin. Based on empirical orthogonal functions (EOF) method, 3 forcing factors were identified contributing to the extreme events of PM 2.5 and selected elements, i.e., urban direct emissions, wet deposition and a combination of coarse mode sources. Conditional probability functions (CPF) were performed using wind profiles and elemental concentrations. The CPF results showed that BC and elemental Cl, K, Fe, Cu and Zn in the fine mode were mostly from the northwest, indicating that industrial emissions and combustion were the main sources. For elements in the coarse mode, Si, Al, K, Ca, Fe and Ti showed similar patterns, suggesting same sources such as local soil dust/construction activities. Coarse elemental Cl was mostly from the south and southeast, implying the influence of marine aerosol sources. For other trace elements, we found vanadium (V) in fine PM was mainly from the sources located to the southeast of the measuring site. Combined with CPF results of S and V in fine PM, we concluded shipping emissions were likely an important elemental emission source. Copyright © 2016. Published by Elsevier B.V.

  2. MICROARRAY ANALYSIS OF PM-INDUCED GENEEXPRESSION IN HUMAN BRONCHIAL EPITHELIAL CELLS

    EPA Science Inventory

    Ambient air particles (PM) are generally classified into 3 sizes; coarse (2.5, 10m), fine (0.1, 2.5m), and ultrafine (<0.lpm). Each particle size is evolved from different sources and transformation processes (e.g., combustion vs. mechanical abrasion, and atmospheric conversion ...

  3. Modelling the fine and coarse fraction of heavy metals in Spain

    NASA Astrophysics Data System (ADS)

    García Vivanco, Marta; González, M. Angeles

    2014-05-01

    Heavy metals, such as cadmium, lead, nickel, arsenic, copper, chrome, zinc and selenium, are present in the air due to natural and anthropogenic emissions, normally joined to particles. These metals can affect life organisms via inhalation or ingestion, causing damages in human health and ecosystems. Small particles are inhaled and embebed in lungs and alveolus more easily than coarse particles. The CHIMERE model is a eulerian air quality model extensively used in air quality modelling. Metals have been recently included in this model in a special version developed in the CIEMAT (Madrid, Spain) modelling group. Vivanco et al. (2011) and González et al. (2012) showed the model performance for some metals in Spain and Europe. However, in these studies, metals were considered as fine particles. Some studies based on observed heavy metals air concentration indicate the presence of metals also in the coarse fraction, in special for Cu and Zn. For this reason, a new attempt of modelling metals considering a fine (<2.5 micrometres) and coarse (2.5-10 micrometres) fraction has been done. Measurements of metal concentration in PM10, PM2.5 and PM1 recorded in Spain (Fernández-Camacho et al., 2012; Querol et al., 2008) were used to obtain the new metal particle distribution size. Results and the evaluation of the model performance at some minoring sites in Spain is presented. References: - Vivanco, M. G., M.A: González, I. Palomino, J. L. Garrido, X. Querol, B. Bessagnet, J.de la Rosa, A.M. Sánchez de la Campa, 2011. Modelling Arsenic, Lead, Cadmium and Nickel Ambient Air Concentrations in Spain, 2011. Proceedings of the 11 th International Conference on Computational Science and Its Applications (ICCSA 11) 243-246 - González, Ma Vivanco, Marta; Palomino, Inmaculada; Garrido, Juan; Santiago, Manuel; Bessagnet, Bertrand Modelling Some Heavy Metals Air Concentration in Europe. // Water, Air & Soil Pollution;Sep2012, Vol. 223 Issue 8, p5227

  4. Urban PM in Eastern Germany: Source apportionment and contributions from different spatial scales

    NASA Astrophysics Data System (ADS)

    van Pinxteren, D.; Fomba, K. W.; Mothes, F.; Spindler, G.; Herrmann, H.

    2017-12-01

    Understanding the contributions of particulate matter (PM) sources and the source areas impacting total PM levels in a city are important requirements for further developing clean air policies and efficient abatement strategies. This presentation reports on two studies in Eastern Germany providing a detailed picture of present-day urban PM sources and discriminating contributions of local, regional and long-range sources. The "Leipzig Aerosol 2013-15" study yielded contributions of 12 sources to coarse, fine, and ultrafine particles, resolved by Positive Matrix Factorization (PMF) from comprehensive chemical speciation of 5-stage Berner impactor samples at 4 different sites in the Leipzig area. Dominant winter-time sources were traffic exhaust and non-exhaust emissions, secondary aerosol formation, and combustion emissions from both biomass and coal burning with different relative importance in different particle size ranges. Local sources dominated PM levels in ultrafine and coarse particles (60% - 80%) while high mass concentrations in accumulation mode particles mainly resulted from regional import into the city (70%). The "PM-East" study compiled PM10 mass and constituents' concentrations at 10 urban and rural sites in Eastern Germany during winter 2016/17, which included a 3-week episode of frequent exceedances of the PM10 limit value. PMF source apportionment is performed for a subset of the sites, including the city of Berlin. Contributions from short-, mid-, and long-range sources, including trans-boundary pollution import from neighbouring countries, are quantitatively assessed by advanced back trajectory statistical methods. Data analysis in PM-East is ongoing and final results will be available by November. Funding is acknowledged from 4 federal states of Germany: Berlin Senate Department for Environment, Transport and Climate Protection; Saxon State Office for Environment, Agriculture and Geology; State Agency for Environment, Nature Conservation and

  5. In vitro toxicity of particulate matter (PM) collected at different sites in the Netherlands is associated with PM composition, size fraction and oxidative potential - the RAPTES project

    PubMed Central

    2011-01-01

    Background Ambient particulate matter (PM) exposure is associated with respiratory and cardiovascular morbidity and mortality. To what extent such effects are different for PM obtained from different sources or locations is still unclear. This study investigated the in vitro toxicity of ambient PM collected at different sites in the Netherlands in relation to PM composition and oxidative potential. Method PM was sampled at eight sites: three traffic sites, an underground train station, as well as a harbor, farm, steelworks, and urban background location. Coarse (2.5-10 μm), fine (< 2.5 μm) and quasi ultrafine PM (qUF; < 0.18 μm) were sampled at each site. Murine macrophages (RAW 264.7 cells) were exposed to increasing concentrations of PM from these sites (6.25-12.5-25-50-100 μg/ml; corresponding to 3.68-58.8 μg/cm2). Following overnight incubation, MTT-reduction activity (a measure of metabolic activity) and the release of pro-inflammatory markers (Tumor Necrosis Factor-alpha, TNF-α; Interleukin-6, IL-6; Macrophage Inflammatory Protein-2, MIP-2) were measured. The oxidative potential and the endotoxin content of each PM sample were determined in a DTT- and LAL-assay respectively. Multiple linear regression was used to assess the relationship between the cellular responses and PM characteristics: concentration, site, size fraction, oxidative potential and endotoxin content. Results Most PM samples induced a concentration-dependent decrease in MTT-reduction activity and an increase in pro-inflammatory markers with the exception of the urban background and stop & go traffic samples. Fine and qUF samples of traffic locations, characterized by a high concentration of elemental and organic carbon, induced the highest pro-inflammatory activity. The pro-inflammatory response to coarse samples was associated with the endotoxin level, which was found to increase dramatically during a three-day sample concentration procedure in the laboratory. The underground samples

  6. Passive Sampling to Capture the Spatial Variability of Coarse Particles by Composition in Cleveland, OH

    EPA Science Inventory

    Passive samplers deployed at 25 sites for three week-long intervals were used to characterize spatial variability in the mass and composition of coarse particulate matter (PM10-2.5) in Cleveland, OH in summer 2008. The size and composition of individual particles deter...

  7. DIRECT PERSONAL COARSE PARTICULATE MATTER CONCENTRATIONS ASSOCIATED WITH THE NORTH CAROLINA ADULT ASTHMA AND ENVIRONMENT STUDY.

    EPA Science Inventory

    A prototype coarse particulate matter PM(10-2.5) monitor was field evaluated as part of the North Carolina Adult Asthma and Environment Study (NCAAES). The NCAAES was designed to evaluate if airway and blood inflammatory markers in moderate asthmatic adults vary with changes in ...

  8. Temporal and Spatial Variations in Fine and Coarse Particles in Seoul, Korea

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ghim, Young Sung

    2015-01-01

    Concentrations of fine (PM2.5) and coarse particles (PM10 -2.5), whose diameters are less 2.5 µm, and between 2.5 and 10 µm, respectively, at ambient air monitoring stations in Seoul between 2002 and 2008 were analyzed. Effects of Asian dust are mainly manifested as concentration spikes of PM10 - 2.5 but were considerable on PM2.5 levels in 2002 when Asian dust storms were the strongest. Excluding the effects of Asian dust, annual average PM2.5 showed a downward trend. Despite a similarity in year - to - year variations, PM10- 2.5, mostly affected by fugitive dust emissions, and CO and NO2, primarilymore » affected by motor vehicle emissions, did not show a decrease. PM2.5 along with CO and NO2 had the highest values during the morning rush hour. PM10 - 2.5 peak lagged about one hour behind that of PM2.5 because of fugitive dust emissions despite an increasing mixing height. On high PM2.5 days, PM2. 5 peaks occurred two hours later than usual as the effects of secondary formation became more important. A test for the spatial variabilities shows that PM10 - 2.5, which is known to be greatly influenced by local effects, is lower in its correlation coeffic ient and higher in its coefficient of divergence (COD, which serves as an indicator for spatial variability) than PM2.5, albeit that the difference between the two is small. The average COD of PM2.5 among monitoring stations was about 0.2 but was lowered t o 0.13 when considering high PM2.5 days only, which signifies that spatial uniformity increases significantly.« less

  9. Temporal variations and spatial distribution of ambient PM2.2 and PM10 concentrations in Dhaka, Bangladesh.

    PubMed

    Begum, Bilkis A; Biswas, Swapan K; Hopke, Philip K

    2006-04-01

    Concentrations and characteristics of airborne particulate matter (PM(10), PM(2.2) and BC) on air quality have been studied at two air quality-monitoring stations in Dhaka, the capital of Bangladesh. One site is at the Farm Gate area, a hot spot with very high pollutant concentrations because of its proximity to major roadways. The other site is at a semi-residential area located at the Atomic Energy Centre, Dhaka Campus, (AECD) with relatively less traffic. The samples were collected using a 'Gent' stacked filter unit in two fractions of 0-2.2 mum and 2.2-10 mum sizes. Samples of fine (PM(2.2)) and coarse (PM(2.2-10)) airborne particulate matter fractions collected from 2000 to 2003 were studied. It has been observed that fine particulate matter has a decreasing trend, from prior year measurements, because of Government policy interventions like phase-wise plans to take two-stroke three-wheelers off the roads in Dhaka and finally banned from January 1, 2003. Other policy interventions were banning of old buses and trucks to ply on Dhaka city promotion of the using compressed natural gas (CNG), introducing air pollution control devices in vehicles, etc. It was found that both local (mostly from vehicular emissions) and possibly some regional emission sources are responsible for high PM(2.2) and BC concentrations in Dhaka. PM(2.2), PM(2.2-10) and black carbon concentration levels depend on the season, wind direction and wind speed. Transport related emissions are the major source of BC and long-range transportation from fossil fuel related sources and biomass burning could be another substantial source of BC.

  10. Effects of Source-Apportioned Coarse Particulate Matter (PM) on Allergic Responses in Mice

    EPA Science Inventory

    The Cleveland Multiple Air Pollutant Study (CMAPS) is one of the first comprehensive studies conducted to evaluate particulate matter (PM) over local and regional scales. Cleveland and the nearby Ohio River Valley impart significant regional sources of air pollution including coa...

  11. Pulmonary function response in smokers and patients with chronic obstructive lung diseae (COPD) following exposure to concentrated fine (PM2.5) particles

    EPA Science Inventory

    Population-based studies strongly suggest that smokers and patients with COPD may be susceptible to particulate matter (PM). The reported associations were stronger with fine than coarse PM .These findings, however, have not been supported by laboratory or clinical data. We stu...

  12. Spatial & temporal variations of PM10 and particle number concentrations in urban air.

    PubMed

    Johansson, Christer; Norman, Michael; Gidhagen, Lars

    2007-04-01

    The size of particles in urban air varies over four orders of magnitude (from 0.001 microm to 10 microm in diameter). In many cities only particle mass concentrations (PM10, i.e. particles <10 microm diameter) is measured. In this paper we analyze how differences in emissions, background concentrations and meteorology affect the temporal and spatial distribution of PM10 and total particle number concentrations (PNC) based on measurements and dispersion modeling in Stockholm, Sweden. PNC at densely trafficked kerbside locations are dominated by ultrafine particles (<0.1 microm diameter) due to vehicle exhaust emissions as verified by high correlation with NOx. But PNC contribute only marginally to PM10, due to the small size of exhaust particles. Instead wear of the road surface is an important factor for the highest PM10 concentrations observed. In Stockholm, road wear increases drastically due to the use of studded tires and traction sand on streets during winter; up to 90% of the locally emitted PM10 may be due to road abrasion. PM10 emissions and concentrations, but not PNC, at kerbside are controlled by road moisture. Annual mean urban background PM10 levels are relatively uniformly distributed over the city, due to the importance of long range transport. For PNC local sources often dominate the concentrations resulting in large temporal and spatial gradients in the concentrations. Despite these differences in the origin of PM10 and PNC, the spatial gradients of annual mean concentrations due to local sources are of equal magnitude due to the common source, namely traffic. Thus, people in different areas experiencing a factor of 2 different annual PM10 exposure due to local sources will also experience a factor of 2 different exposure in terms of PNC. This implies that health impact studies based solely on spatial differences in annual exposure to PM10 may not separate differences in health effects due to ultrafine and coarse particles. On the other hand

  13. Characterisation of PM(10), PM(2.5) and benzene soluble organic fraction of particulate matter in an urban area of Kolkata, India.

    PubMed

    Gupta, A K; Nag, Subhankar; Mukhopadhyay, U K

    2006-04-01

    In this study, the relationship between inhalable particulate (PM(10)), fine particulate (PM(2.5)), coarse particles (PM(2.5 - 10)) and meteorological parameters such as temperature, relative humidity, solar radiation, wind speed were statistically analyzed and modelled for urban area of Kolkata during winter months of 2003-2004. Ambient air quality was monitored with a sampling frequency of twenty-four hours at three monitoring sites located near traffic intersections and in an industrial area. The monitoring sites were located 3-5 m above ground near highly trafficked and congested areas. The 24 h average PM(10) and PM(2.5) samples were collected using Thermo-Andersen high volume samplers and exposed filter papers were extracted and analysed for benzene soluble organic fraction. The ratios between PM(2.5) and PM(10) were found to be in the range of 0.6 to 0.92 and the highest ratio was found in the most polluted urban site. Statistical analysis has shown a strong positive correlation between PM(10) and PM(2.5) and inverse correlation was observed between particulate matter (PM(10) and PM(2.5)) and wind speed. Statistical analysis of air quality data shows that PM(10) and PM(2.5) are showing poor correlation with temperature, relative humidity and solar radiation. Regression equations for PM(10) and PM(2.5) and meteorological parameters were developed. The organic fraction of particulate matter soluble in benzene is an indication of poly aromatic hydrocarbon (PAH) concentration present in particulate matter. The relationship between the benzene soluble organic fraction (BSOF) of inhalable particulate (PM(10)) and fine particulate (PM(2.5)) were analysed for urban area of Kolkata. Significant positive correlation was observed between benzene soluble organic fraction of PM(10) (BSM10) and benzene soluble organic fraction of PM(2.5) (BSM2.5). Regression equations for BSM10 and BSM2.5 were developed.

  14. Aerosols in the CALIOPE air quality modelling system: validation and analysis of PM levels, optical depths and chemical composition over Europe

    NASA Astrophysics Data System (ADS)

    Basart, S.; Pay, M. T.; Jorba, O.; Pérez, C.; Jiménez-Guerrero, P.; Schulz, M.; Baldasano, J. M.

    2011-07-01

    The CALIOPE high-resolution air quality modelling system is developed and applied to Europe (12 km × 12 km, 1 h). The modelled daily to seasonal aerosol variability over Europe in 2004 have been evaluated and analysed. The aerosols are estimated from two models, CMAQv4.5 (AERO4) and BSC-DREAM8b. CMAQv4.5 calculates biogenic, anthropogenic and sea salt aerosol and BSC-DREAM8b provides the natural mineral dust contribution from North African deserts. For the evaluation, we use daily PM10/PM2.5 and chemical composition data from 54 stations of the EMEP/CREATE network and coarse and fine aerosol optical depth (AOD) data from 35 stations of the AERONET sun photometer network. The model achieves daily PM10 and PM2.5 correlations of 0.57 and 0.47, respectively, and total, coarse and fine AOD correlations of 0.51, 0.63, and 0.53, respectively. The higher correlations of the PM10 and the coarse mode AOD are largely due to the accurate representation of the African dust influence in the forecasting system. Overall PM and AOD levels are underestimated. The evaluation of the chemical composition highlights underestimations of the modelled fine fractions particularly for carbonaceous matter (EC and OC) and secondary inorganic aerosols (SIA; i.e. nitrates, sulphates and ammonium). The scores of the bulk parameters are significantly improved after applying a simple model bias correction based on the chemical composition observations. SIA are dominant in the fine fractions representing up to 80 % of the aerosol budget in latitudes beyond 40° N. The highest aerosol concentrations are found over the industrialized and populated areas of the Po Valley and the Benelux regions. High values in southern Europe are linked to the transport of coarse particles from the Sahara desert which contributes up to 40 % of the total aerosol mass. Close to the surface, maxima dust seasonal concentrations (>30 μg m-3) are found between spring and early autumn. We estimate that desert dust causes

  15. Exposure to coarse particulate matter during gestation and birth weight in the U.S.

    PubMed

    Ebisu, Keita; Berman, Jesse D; Bell, Michelle L

    2016-09-01

    Few studies have explored the relationship between coarse particles (PM10-2.5) and adverse birth outcomes. We examined associations between gestational exposure of PM10-2.5 and birth weight. U.S. birth certificates data (1999-2007) were acquired for 8,017,865 births. Gestational and trimester exposures of PM10-2.5 were estimated using co-located PM10 and PM2.5 monitors ≤35km from the population-weighted centroid of mothers' residential counties. A linear regression model was applied, adjusted by potential confounders. As sensitivity analyses, we explored alternative PM10-2.5 estimations, adjustment for PM2.5, and stratification by regions. Gestational exposure to PM10-2.5 was associated with 6.6g (95% Confidence Interval: 5.9, 7.2) lower birth weight per interquartile range increase (7.8μg/m(3)) in PM10-2.5 exposures. All three trimesters showed associations. Under different exposure methods for PM10-2.5, associations remained consistent but with different magnitudes. Results were robust after adjusting for PM2.5, and regional analyses showed associations in all four regions with larger estimates in the South. Our results suggest that PM10-2.5 is associated with birth weight in addition to PM2.5. Regional heterogeneity may reflect differences in population, measurement error, region-specific emission pattern, or different chemical composition within PM10-2.5. Most countries do not set health-based standards for PM10-2.5, but our findings indicate potentially important health effects of PM10-2.5. Copyright © 2016 Elsevier Ltd. All rights reserved.

  16. Risk of Cardiovascular Hospitalizations from Exposure to Coarse Particulate Matter (PM10) Below the European Union Safety Threshold.

    PubMed

    Vaduganathan, Muthiah; De Palma, Giuseppe; Manerba, Alessandra; Goldoni, Matteo; Triggiani, Marco; Apostoli, Pietro; Dei Cas, Livio; Nodari, Savina

    2016-04-15

    The association between exposure to air pollution and acute cardiovascular (CV) events is well documented; however, limited data are available evaluating the public health safety of various "doses" of particular matter (PM) below currently accepted safety thresholds. We explored the cross-sectional association between PM with aerodynamic diameter <10 μm (PM10) and daily CV hospitalizations in Brescia, Italy, using Poisson regression models adjusted for age, gender, and meteorologic indices. Average daily exposure to PM10 obtained from arithmetic means of air pollution data were captured by 4 selected monitoring stations. PM10 data were expressed as daily means (lag 0-day) or 3-day moving averages (lag 3-day) and categorized according to the European Union daily limit value of 50 μg/m(3). From September 2004 to September 2007, data from 6,000 acute CV admissions to a tertiary referral center were collected. An increase of 1 μg/m(3) PM10 at lag 0-day was independently associated with higher rates of acute hospitalizations for composite CV-related events (relative risk [RR] 1.004, 95% confidence interval [CI] 1.002 to 1.006), acute heart failure (RR 1.004, 95% CI 1.001 to 1.008), acute coronary syndromes (RR 1.002, 95% CI 0.999 to 1.005), malignant ventricular arrhythmias (RR 1.004, 95% CI 0.999 to 1.010), and atrial fibrillation (RR 1.008, 95% CI 1.003 to 1.012). Similar results were obtained using PM10 lag 3-day data. The excess PM10 CV hospitalization risk (by lag 0-day and lag 3-day) did not vary significantly above and below the 50 μg/m(3) safety threshold or by age and gender. In conclusion, increased levels of PM10, even below the current limits set by the European Union, were associated with excess risk for admissions for acute CV events. Copyright © 2016 Elsevier Inc. All rights reserved.

  17. Ion chemistry and source identification of coarse and fine aerosols in an urban area of eastern central India

    NASA Astrophysics Data System (ADS)

    Verma, Santosh K.; Deb, Manas K.; Suzuki, Yukio; Tsai, Ying I.

    2010-01-01

    This work focuses on size segregated atmospheric aerosol mass concentrations and water soluble inorganic components in Chhattisgarh, the eastern central India. Investigation on the monitoring of ambient air levels of atmospheric particulates were done around a large source of primary anthropogenic particulate emissions: the industrial area and coal based power plants. Chemical characterization was carried out for aerosol samples collected in urban area, Raipur, (21°14'N, 81°38'E) of Chhattisgarh region over a period of one year, using cascade impactor. Annual mean of mass concentration for coarse (PM 2.5-10) and fine (PM 2.5) aerosols were monitored to be 238.1 ± 89.9 and 167.0 ± 75.3 µg m - 3 respectively This work deals with the seasonal variation and meteorological influences of inorganic components of the aerosols viz. NO 3-, Cl - and SO 42-, Mg 2+, Na +, K +, Ca 2+ and NH 4+. The annual mean concentration of the inorganic components were monitored to be 3.8 ± 2.5, 8.9 ± 2.7, 10.2 ± 1.5, 2.6 ± 0.6, 8.7 ± 7.2, 4.6 ± 1.8, 16.4 ± 6.9 and 0.4 ± 0.5 µg m - 3 respectively in coarse particles and 8.2 ± 7.1, 6.8 ± 3.6, 46.5 ± 32.8, 1.7 ± 0.6, 7.4 ± 3.6, 5.9 ± 3.4, 10.2 ± 2.9, and 8.8 ± 7.7 µg m - 3 respectively in fine particles, for the above ions. The average distribution of nitrate and sulphate in PM 2.5-10 were found to be 1.6 and 4.2% and in PM 2.5 were 4.9 and 27.9% respectively indicating the dominance of sulphate in both PM 2.5-10 and PM 2.5 particles. Here, industrial emission plays important role for contribution of PM 2.5 particle loading in the atmosphere. The cation-anion rational analysis indicated that the PM 2.5-10 particles were mostly neutralized and PM 2.5 particle were acidic. The major ions were mainly in the form of NaCl > CaSO 4 > K 2SO 4 > MgSO 4 > KCl > NH 4Cl > Ca(NO 3) 2 > KNO 3 > MgCl 2 > Mg(NO 3) 2 > NH 4NO 3 > (NH 4) 2SO 4 in coarse aerosol particles and (NH 4) 2SO 4 > K 2SO 4 > CaSO 4 > NaCl > NH 4NO 3 > CaCl 2

  18. Technical requirements for bioassay support services

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hickman, D.P.; Anderson, A.L.

    1991-05-01

    This document provides the technical basis for the Chem-Nuclear Geotech (Geotech) bioassay program. It includes information and details that can be used as a model in providing technical contents and requirements for bioassay laboratory support, either internally or in solicitations by Geotech to obtain subcontractor laboratory support. It provides a detailed summary and description of the types of bioassay samples to be expected in support of Geotech remedial projects for the US Department of Energy and the bioassay services and analytical requirements necessary to process such samples, including required limits of sensitivity. General responsibilities of the bioassay laboratory are alsomore » addressed, including quality assurance. Peripheral information of importance to the program is included in the appendices of this document. 7 tabs.« less

  19. Aerosols in the CALIOPE air quality modelling system: evaluation and analysis of PM levels, optical depths and chemical composition over Europe

    NASA Astrophysics Data System (ADS)

    Basart, S.; Pay, M. T.; Jorba, O.; Pérez, C.; Jiménez-Guerrero, P.; Schulz, M.; Baldasano, J. M.

    2012-04-01

    The CALIOPE air quality modelling system is developed and applied to Europe with high spatial resolution (12 km × 12 km). The modelled daily-to-seasonal aerosol variability over Europe in 2004 is evaluated and analysed. Aerosols are estimated from two models, CMAQv4.5 (AERO4) and BSC-DREAM8b. CMAQv4.5 calculates biogenic, anthropogenic and sea salt aerosol and BSC-DREAM8b provides the natural mineral dust contribution from North African deserts. For the evaluation, we use daily PM10, PM2.5 and aerosol components data from 55 stations of the EMEP/CREATE network and total, coarse and fine aerosol optical depth (AOD) data from 35 stations of the AERONET sun photometer network. Annual correlations between modelled and observed values for PM10 and PM2.5 are 0.55 and 0.47, respectively. Correlations for total, coarse and fine AOD are 0.51, 0.63, and 0.53, respectively. The higher correlations of the PM10 and the coarse mode AOD are largely due to the accurate representation of the African dust influence in the forecasting system. Overall PM and AOD levels are underestimated. The evaluation of the aerosol components highlights underestimations in the fine fraction of carbonaceous matter (EC and OC) and secondary inorganic aerosols (SIA; i.e. nitrate, sulphate and ammonium). The scores of the bulk parameters are significantly improved after applying a simple model bias correction based on the observed aerosol composition. The simulated PM10 and AOD present maximum values over the industrialized and populated Po Valley and Benelux regions. SIA are dominant in the fine fraction representing up to 80% of the aerosol budget in latitudes north of 40° N. In southern Europe, high PM10 and AOD are linked to the desert dust transport from the Sahara which contributes up to 40% of the aerosol budget. Maximum seasonal ground-level concentrations (PM10 > 30 μg m-3) are found between spring and early autumn. We estimate that desert dust causes daily exceedances of the PM10 European

  20. Estimated Short-Term Effects of Coarse Particles on Daily Mortality in Stockholm, Sweden

    PubMed Central

    Johansson, Christer; Forsberg, Bertil

    2011-01-01

    Background: Although serious health effects associated with particulate matter (PM) with aerodynamic diameter ≤ 10 μm (PM10) and ≤ 2.5 μm (PM2.5; fine fraction) are documented in many studies, the effects of coarse PM (PM2.5–10) are still under debate. Objective: In this study, we estimated the effects of short-term exposure of PM2.5–10 on daily mortality in Stockholm, Sweden. Method: We collected data on daily mortality for the years 2000 through 2008. Concentrations of PM10, PM2.5, ozone, and carbon monoxide were measured simultaneously in central Stockholm. We used additive Poisson regression models to examine the association between daily mortality and PM2.5–10 on the day of death and the day before. Effect estimates were adjusted for other pollutants (two-pollutant models) during different seasons. Results: We estimated a 1.68% increase [95% confidence interval (CI): 0.20%, 3.15%] in daily mortality per 10-μg/m3 increase in PM2.5–10 (single-pollutant model). The association with PM2.5–10 was stronger for November through May, when road dust is most important (1.69% increase; 95% CI: 0.21%, 3.17%), compared with the rest of the year (1.31% increase; 95% CI: –2.08%, 4.70%), although the difference was not statistically significant. When adjusted for other pollutants, particularly PM2.5, the effect estimates per 10 μg/m3 for PM2.5–10 decreased slightly but were still higher than corresponding effect estimates for PM2.5. Conclusions: Our analysis shows an increase in daily mortality associated with elevated urban background levels of PM2.5–10. Regulation of PM2.5–10 should be considered, along with actions to specifically reduce PM2.5–10 emissions, especially road dust suspension, in cities. PMID:22182596

  1. Short-term exposure to PM 10, PM 2.5, ultrafine particles and CO 2 for passengers at an intercity bus terminal

    NASA Astrophysics Data System (ADS)

    Cheng, Yu-Hsiang; Chang, Hsiao-Peng; Hsieh, Cheng-Ju

    2011-04-01

    The Taipei Bus Station is the main transportation hub for over 50 bus routes to eastern, central, and southern Taiwan. Daily traffic volume at this station is about 2500 vehicles, serving over 45,000 passengers daily. The station is a massive 24-story building housing a bus terminal, a business hotel, a shopping mall, several cinemas, offices, private residential suites, and over 900 parking spaces. However, air quality inside this bus terminal is a concern as over 2500 buses are scheduled to run daily. This study investigates the PM 10, PM 2.5, UFP and CO 2 levels inside and outside the bus terminal. All measurements were taken between February and April 2010. Measurement results show that coarse PM inside the bus terminal was resuspended by the movement of large numbers of passengers. The fine and ultrafine PM in the station concourse were from outside vehicles. Moreover, fine and ultrafine PM at waiting areas were exhausted directly from buses in the building. The CO 2 levels at waiting areas were likely elevated by bus exhaust and passengers exhaling. The PM 10, PM 2.5 and CO 2 levels at the bus terminal were lower than Taiwan's EPA suggested standards for indoor air quality. However, UFP levels at the bus terminal were significantly higher than those in the urban background by about 10 times. Therefore, the effects of UFPs on the health of passengers and workers must be addressed at this bus terminal since the levels of UFPs are higher than >1.0 × 10 5 particles cm -3.

  2. Chemical composition and mass closure of ambient coarse particles at traffic and urban-background sites in Thessaloniki, Greece.

    PubMed

    Grigoratos, Theodoros; Samara, Constantini; Voutsa, Dimitra; Manoli, Evangelia; Kouras, Athanasios

    2014-06-01

    Concentrations and chemical composition of the coarse particle fraction (PMc) were investigated at two urban sites in the city of Thessaloniki, Greece, through concurrent sampling of PM10 and PM2.5 during the warm and the cold months of the year. PMc levels at the urban-traffic site (UT) were among the highest found in literature worldwide exhibiting higher values in the cold period. PMc levels at the urban-background site (UB) were significantly lower exhibiting a reverse seasonal trend. Concentration levels of minerals and most trace metals were also higher at the UT site suggesting a stronger impact from traffic-related sources (road dust resuspension, brake and tire abrasion, road wear). According to the chemical mass closure obtained, minerals (oxides of Si, Al, Ca, Mg, Fe, Ti, and K) dominated the PMc profile, regardless of the site and the period, with organic matter and secondary inorganic aerosols (mainly nitrate) also contributing considerably to the PMc mass, particularly in the warm period. The influence of wind speed to dilution and/or resuspension of coarse particles was investigated. The source of origin of coarse particles was also investigated using surface wind data and atmospheric back-trajectory modeling. Finally, the contribution of resuspension to PMc levels was estimated for air quality management perspectives.

  3. Particulate matter (PM) concentrations in underground and ground-level rail systems of the Los Angeles Metro

    NASA Astrophysics Data System (ADS)

    Kam, Winnie; Cheung, Kalam; Daher, Nancy; Sioutas, Constantinos

    2011-03-01

    Elevated concentrations of particulate matter (PM) have been found in a number of worldwide underground transit systems, with major implications regarding exposure of commuters to PM and its associated health effects. An extensive sampling campaign was conducted in May-August 2010 to measure PM concentrations in two lines of the Los Angeles Metro system - an underground subway line (Metro red line) and a ground-level light-rail line (Metro gold line). The campaign goals were to: 1) determine personal PM exposure of commuters of both lines, and 2) measure and compare PM concentrations at station platforms and inside the train. Considering that a commuter typically spent 75% of time inside the train and 25% of time waiting at a station, subway commuters were exposed on average to PM 10 and PM 2.5 concentrations that were 1.9 and 1.8 times greater than the light-rail commuters. The average PM 10 concentrations for the subway line at station platforms and inside the train were 78.0 μg m -3 and 31.5 μg m -3, respectively; for the light-rail line, corresponding PM 10 concentrations were 38.2 μg m -3 and 16.2 μg m -3. Regression analysis demonstrated that personal exposure concentrations for the light-rail line are strongly associated with ambient PM levels ( R2 = 0.61), while PM concentrations for the subway line are less influenced by ambient conditions ( R2 = 0.38) and have a relatively stable background level of about 21 μg m -3. Our findings suggest that local emissions (i.e., vehicular traffic, road dust) are the main source of airborne PM for the light-rail line. The subway line, on the other hand, has an additional source of PM, most likely generated from the daily operation of trains. Strong inter-correlation of PM 10 between the train and station microenvironments shows that airborne PM at stations are the main source of PM inside the trains for both lines ( R2 = 0.91 and 0.81 for subway and light-rail line, respectively). In addition, PM 2.5 and coarse PM

  4. PM source identification at Sunland Park, New Mexico, using a simple heuristic meteorological and chemical analysis.

    PubMed

    Li, Wen-Whai; Cardenas, Nidia; Walton, John; Trujillo, David; Morales, Hugo; Arimoto, Richard

    2005-03-01

    The causes for evening low-wind PM10 and PM2.5 peaks at Sunland Park, NM, were investigated by using wind sector analysis and by assessing relationships between PM loadings and meteorological parameters through canonical ordination analysis. Both PM10 and PM2.5 concentrations during the evening hours accounted for approximately 50% of their respective 24-hr averages, and the PM10 was mainly composed of coarse material (PM10-2.5 amounted to 77% of PM10). A wind sector analysis based on data from three surface meteorological monitoring stations in the region narrowed the potential source region for PM10 and PM2.5 to an area within a few kilometers south of Sunland Park. Canonical ordination analysis confirmed that the peak frequently occurred under stable conditions with weak southerly winds. Chemical analyses of PM showed that elemental and organic carbon (EC and OC, respectively) dominate PM2.5 and inorganic elements dominate PM10-2.5. The combined data for EC/OC, geologic elements, and various trace elements indicate that under low wind and stable conditions, traffic-related PM emissions (motor vehicle exhausts and re-suspended road dust) from the south of the site are the most likely sources for the evening PM10 and PM2.5 peaks.

  5. COARSE PARTICULATE MATTER CONCENTRATIONS FROM RESIDENTIAL OUTDOOR SITES ASSOCIATED WITH THE NORTH CAROLINA ASTHMA AND CHILDREN'S ENVIRONMENT STUDIES (NC-ACES)

    EPA Science Inventory

    Coarse particulate matter (PM10-2.5) concentration data from residential outdoor sites were collected using portable samplers as part of an exposure assessment for the North Carolina Asthma and Children's Environment Study (NC-ACES). PMcoarse values were estimated usi...

  6. Temporal variation of fine and coarse particulate matter sources in Jeddah, Saudi Arabia

    PubMed Central

    Lim, Chris C.; Thurston, George D.; Shamy, Magdy; Alghamdi, Mansour; Khoder, Mamdouh; Mohorjy, Abdullah M.; Alkhalaf, Abdulrahman K.; Brocato, Jason; Chen, Lung Chi; Costa, Max

    2017-01-01

    This study provides the first comprehensive analysis of the seasonal variations and weekday/weekend differences in fine (PM2.5) and coarse (PM2.5–10) particulate matter mass concentrations, elemental constituents, and potential source origins in Jeddah, Saudi Arabia. Air quality samples were collected over one year, from June 2011 to May 2012 at a frequency of three times per week, and analyzed. The average mass concentrations of PM2.5 (21.9 µg/m3) and PM10 (107.8 µg/m3) during the sampling period exceeded the recommended annual average levels by the World Health Organization (WHO) for PM2.5 (10 µg/m3) and PM10 (20 µg/m3), respectively. Similar to other Middle Eastern locales, PM2.5–10 is the prevailing mass component of atmospheric particulate matter at Jeddah, accounting for approximately 80% of the PM10 mass. Considerations of enrichment factors, absolute principal component analysis (APCA), concentration roses, and backward trajectories identified the following source categories for both PM2.5 and PM2.5–10: 1) soil/road dust; 2) incineration; and 3) traffic; and for PM2.5 only, 4) residual oil burning. Soil/road dust accounted for a major portion of both the PM2.5 (27%) and PM2.5–10 (77%) mass, and the largest source contributor for PM2.5 was from residual oil burning (63%). Temporal variations of PM2.5–10 and PM2.5 were observed, with the elevated concentration levels observed for mass during the spring (due to increased dust storm frequency), and on weekdays (due to increased traffic). The predominant role of windblown soil and road dust in both the PM2.5 and PM2.5–10 masses in this city may have implications regarding the toxicity of these particles versus those in the western world where most PM health assessments have been made in the past. These results support the need for region-specific epidemiological investigations to be conducted and considered in future PM standard setting. PMID:28635552

  7. Effects of wind direction on coarse and fine particulate matter concentrations in southeast Kansas.

    PubMed

    Guerra, Sergio A; Lane, Dennis D; Marotz, Glen A; Carter, Ray E; Hohl, Carrie M; Baldauf, Richard W

    2006-11-01

    Field data for coarse particulate matter ([PM] PM10) and fine particulate matter (PM2.5) were collected at selected sites in Southeast Kansas from March 1999 to October 2000, using portable MiniVol particulate samplers. The purpose was to assess the influence on air quality of four industrial facilities that burn hazardous waste in the area located in the communities of Chanute, Independence, Fredonia, and Coffeyville. Both spatial and temporal variation were observed in the data. Variation because of sampling site was found to be statistically significant for PM10 but not for PM2.5. PM10 concentrations were typically slightly higher at sites located within the four study communities than at background sites. Sampling sites were located north and south of the four targeted sources to provide upwind and downwind monitoring pairs. No statistically significant differences were found between upwind and downwind samples for either PM10 or PM2.5, indicating that the targeted sources did not contribute significantly to PM concentrations. Wind direction can frequently contribute to temporal variation in air pollutant concentrations and was investigated in this study. Sampling days were divided into four classifications: predominantly south winds, predominantly north winds, calm/variable winds, and winds from other directions. The effect of wind direction was found to be statistically significant for both PM10 and PM2.5. For both size ranges, PM concentrations were typically highest on days with predominantly south winds; days with calm/variable winds generally produced higher concentrations than did those with predominantly north winds or those with winds from "other" directions. The significant effect of wind direction suggests that regional sources may exert a large influence on PM concentrations in the area.

  8. Quantifying the contribution of long-range transport to particulate matter (PM) mass loadings at a suburban site in the north-western Indo-Gangetic Plain (NW-IGP)

    NASA Astrophysics Data System (ADS)

    Pawar, H.; Garg, S.; Kumar, V.; Sachan, H.; Arya, R.; Sarkar, C.; Chandra, B. P.; Sinha, B.

    2015-08-01

    Many sites in the densely populated Indo-Gangetic Plain (IGP) frequently exceed the national ambient air quality standard (NAAQS) of 100 μg m-3 for 24 h average PM10 and 60 μg m-3 for 24 h average PM2.5 mass loadings, exposing residents to hazardous levels of particulate matter (PM) throughout the year. We quantify the contribution of long-range transport to elevated PM levels and the number of exceedance events through a back-trajectory climatology analysis of air masses arriving at the IISER Mohali Atmospheric Chemistry facility (30.667° N, 76.729° E; 310 m a.m.s.l.) for the period August 2011-June 2013. Air masses arriving at the receptor site were classified into six clusters, which represent synoptic-scale air-mass transport patterns. Long-range transport from the west leads to significant enhancements in the average fine- and coarse-mode PM mass loadings during all seasons. The contribution of long-range transport from the west and south-west (source regions: Arabia, Thar Desert, Middle East and Afghanistan) to coarse-mode PM varied between 9 and 57 % of the total PM10-2.5 mass. Local pollution episodes (wind speed < 1 m s-1) contributed to enhanced PM2.5 mass loadings during both the winter and summer seasons and to enhanced coarse-mode PM only during the winter season. South-easterly air masses (source region: eastern IGP) were associated with significantly lower fine- and coarse-mode PM mass loadings during all seasons. The fraction of days in each season during which the PM mass loadings exceeded the national ambient air quality standard was controlled by long-range transport to a much lesser degree. For the local cluster, which represents regional air masses (source region: NW-IGP), the fraction of days during which the national ambient air quality standard (NAAQS) of 60 μg m-3 for 24 h average PM2.5 was exceeded varied between 36 % of the days associated with this synoptic-scale transport during the monsoon, and 95 % during post-monsoon and winter

  9. Apportionment of sources of fine and coarse particles in four major Australian cities by positive matrix factorisation

    NASA Astrophysics Data System (ADS)

    Chan, Yiu-Chung; Cohen, David D.; Hawas, Olga; Stelcer, Eduard; Simpson, Rod; Denison, Lyn; Wong, Neil; Hodge, Mary; Comino, Eva; Carswell, Stewart

    In this study, 437 days of 6-daily, 24-h samples of PM 2.5, PM 2.5-10 and PM 10 were collected over a 12-month period during 2003-2004 in Melbourne, Sydney, Brisbane and Adelaide. The elemental, ionic and polycyclic aromatic hydrocarbon composition of the particles were determined. Source apportionment was carried out by using the positive matrix factorisation software (PMF2). Eight factors were identified for the fine particle samples including 'motor vehicles', 'industry', 'other combustion sources', 'ammonium sulphates', 'nitrates', 'marine aerosols', 'chloride depleted marine aerosols' and 'crustal/soil dust'. On average combustion sources, secondary nitrates/sulphates and natural origin dust contributed about 46%, 25% and 26% of the mass of the fine particle samples, respectively. 'Crustal/soil dust', 'marine aerosols', 'nitrates' and 'road side dust' were the four factors identified for the coarse particle samples. On average natural origin dust contributed about 76% of the mass of the coarse particle samples. The contributions of the sources to the sample mass basically reflect the emission source characteristics of the sites. Secondary sulphates and nitrates were found to spread out evenly within each city. The average contribution of secondary nitrates to fine particles was found to be rather uniform in different seasons, rather than higher in winter as found in other studies. This could be due to the low humidity conditions in winter in most of the Australian cities which made the partitioning of the particle phase less favourable in the NH 4NO 3 equilibrium system. A linear relationship was found between the average contribution of marine aerosols and the distance of the site from the bay side. Wind erosion was found associated with higher contribution of crustal dust on average and episodes of elevated concentration of coarse particles in spring and summer.

  10. Effect of meteorological parameters on fine and coarse particulate matter mass concentration in a coal-mining area in Zonguldak, Turkey.

    PubMed

    Tecer, Lokman Hakan; Süren, Pinar; Alagha, Omar; Karaca, Ferhat; Tuncel, Gürdal

    2008-04-01

    In this work, the effect of meteorological parameters and local topography on mass concentrations of fine (PM2.5) and coarse (PM2.5-10) particles and their seasonal behavior was investigated. A total of 236 pairs of samplers were collected using an Anderson Dichotomous sampler between December 2004 and October 2005. The average mass concentrations of PM2.5, PM2.5-10, and particulate matter less than 10 microm in aerodynamic diameter (PM10) were found to be 29.38, 23.85, and 53.23 microg/m3, respectively. The concentrations of PM2.5 and PM10 were found to be higher in heating seasons (December to May) than in summer. The increase of relative humidity, cloudiness, and lower temperature was found to be highly related to the increase of particulate matter (PM) episodic events. During non-rainy days, the episodic events for PM2.5 and PM10 were increased by 30 and 10.7%, respectively. This is a result of the extensive use of fuel during winter for heating purposes and also because of stagnant air masses formed because of low temperature and low wind speed over the study area.

  11. Relation between sources of particulate air pollution and biological effect parameters in samples from four European cities: An exploratory study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Steerenberg, P.A.; van Amelsvoort, L.; Lovik, M.

    2006-05-15

    Given that there are widely different prevalence rates of respiratory allergies and asthma between the countries of Europe and that exposure to ambient particulate matter (PM) is substantial in urban environments throughout Europe, an EU project entitled 'Respiratory Allergy and Inflammation Due to Ambient Particles' (RAIAP) was set up. The project focused on the role of physical and chemical composition of PM on release of cytokines of cells in vitro, on respiratory inflammation in vivo, and on adjuvant potency in allergy animal models. Coarse (2.5 - 10 {mu}m) and fine (0.15 - 2.5 {mu}m) particles were collected during the spring,more » summer and winter in Rome ( I), Oslo (N), Lodz (PL), and Amsterdam (NL). Markers within the same model were often well correlated. Markers of inflammation in the in vitro and in vivo models also showed a high degree of correlation. In contrast, correlation between parameters in the different allergy models and between allergy and inflammation markers was generally poor. This suggests that various bioassays are needed to assess the potential hazard of PM. The present study also showed that by clustering chemical constituents of PM based on the overall response pattern in the bioassays, five distinct groups could be identified. The clusters of traffic, industrial combustion and/or incinerators, and combustion of black and brown coal/wood smoke were associated primarily with adjuvant activity for respiratory allergy, whereas clusters of crustal of material and sea spray are predominantly associated with measures for inflammation and acute toxicity. The present study has shown that biological effect of PM can be linked to one or more PM emission sources and that this linkage requires a wide range of bioassays.« less

  12. Concentrations of ambient air particulates (TSP, PM2.5 and PM2.5-10) and ionic species at offshore areas near Taiwan Strait.

    PubMed

    Fang, Guor-Cheng; Wu, Yuh-Shen; Chen, Jyh-Cherng; Rau, Jui-Yeh; Huang, Shih-Han; Lin, Chi-Kwong

    2006-05-20

    The concentrations of total suspended particulate (TSP), fine particles PM(2.5) (with aerodynamic diameter <2.5 microm), coarse particles PM(2.5-10) (with aerodynamic diameter 2.5-10 microm,), and water-soluble inorganic ions were studied at two offshore sampling sites, Taichung Harbor (TH) and Wuci Traffic (WT), near Taiwan Strait in central Taiwan during March 2004 to January 2005. Statistical analyses were also carried out to estimate the possible sources of particulate pollution. Experimental results showed that the average mass concentrations of TSP, PM(2.5) and PM(2.5-10) at TH and WT sampling sites were 154.54 +/- 31.45 and 113.59 +/- 31.94 microg m(-3), 54.03 +/- 16.92 and 42.76 +/- 12.52 microg m(-3), and 30.31+/- 9.79 and 24.16 +/- 7.27 microg m(-3), respectively. The dominant inorganic ions at two sampling sites were SO(4)(2-), NO(3)(-), and NH(4)(+) for TSP and PM(2.5), but that were Ca(2+), Cl(-), and Na(+) for PM(2.5-10). The concentrations of most particulates and inorganic ions were higher in winter at both two sampling sites, and were higher at TH than WT sampling site in each season. From statistical analysis, air-slake of crust surface, sea-salt aerosols, agriculture activities, coal combustion, and mobile vehicles were the possible emission sources of particulate pollution at TH and WT sampling sites.

  13. Bioassay criteria for environmental restoration workers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carbaugh, E.H.; Bihl, D.E.

    1993-01-01

    Environmental restoration (ER) work at the U. S. Department of Energy Hanford Site posed questions concerning when to perform bioassay monitoring of workers for potential intakes of radioactivity. Application of criteria originally developed for use inside radionuclide processing facilities to ER work resulted in overly restrictive bioassay requirements. ER work typically involves site characterization or, excavating large quantities of potentially contaminated soil, rather than working with concentrated quantities of radioactivity as in a processing facility. An improved approach, tailored to ER work, provided soil contamination concentrations above which worker bioassay would be required. Soil concentrations were derived assuming acute ormore » chronic intakes of 2% of an Annual Limit on Intake (ALI), or a potential committed effective dose equivalent of 100 mrem, and conservative dust loading of air from the work. When planning ER work, the anticipated soil concentration and corresponding need for bioassay could be estimated from work-site historical records. Once site work commenced, soil sampling and work-place surveys could be used to determine bioassay needs. This approach substantially reduced the required number of bioassay samples with corresponding reductions in analytical costs, schedules, and more flexible work-force management. (Work supported by the US Department of Energy under contract DOE-AC06-76RLO 1830.)« less

  14. Comparison between the optical properties of aerosols in the fine and coarse fractions over Valladolid, Spain.

    PubMed

    Mogo, S; López, J F; Cachorro, V E; de Frutos, A; Zocca, R; Barroso, A; Mateos, D; Conceição, E

    2017-02-22

    Continuous measurements of the optical properties of aerosol particles have been made at Valladolid, Spain, covering the period from June 2011 to July 2012. The measurements were made at two size cuts: sub-10 μm and sub-1 μm (PM10 and PM1). The data measured were the scattering and backscattering coefficients, σ s and σ bs , obtained from an integrating nephelometer, and the absorption coefficient, σ a , obtained from a particle soot absorption photometer. Spectrally resolved data were obtained from both instruments at 3 wavelengths (blue/green/red) at low relative humidity (RH < 40%). The statistical data for the instruments were calculated based on the hourly averages. For the PM10 fraction, the hourly mean values of σ s and σ a at 550 nm were 33 Mm -1 (StD = 30 Mm -1 ) and 4 Mm -1 (StD = 3 Mm -1 ), respectively. For the PM1 fraction, σ s and σ a mean values were 16 Mm -1 (StD = 14 Mm -1 ) and 4 Mm -1 (StD = 3 Mm -1 ), also at 550 nm. The derived parameters analyzed were the single scattering albedo, ω 0 , the backscatter fraction, σ bs /σ s , and the Ångström exponents of scattering, absorption and single scattering albedo, α s , α a and α ω 0 . The contribution of the PM10 and the PM1 fractions for all these parameters plays a central role throughout the paper, allowing an improved classification of aerosol types. Our data are dominated by elemental carbon (EC) and elemental carbon/organic carbon mixed (EC/OC). For the PM10 data, dust dominated aerosol is also observed. Although we found that fine particles contribute more than coarse particles for decreasing the ω 0 values, results suggest that it is also necessary to quantify the effect of coarse particles. Fine particles were found to produce ω 0 spectra that decrease with the wavelength, α ω 0 > 0, while PM10 fractions were found to produce spectra that can decrease or increase with the wavelength, 0 < α ω 0 < 0. Both daily cycle and monthly variations are analyzed and related to

  15. Receptor modelling of boreal wildfire associated PM2.5 in Halifax, Nova Scotia, Canada

    NASA Astrophysics Data System (ADS)

    Gibson, Mark D.; Kuchta, James; Chisholm, Lucy; Duck, Tom; Hopper, Jason; Beauchamp, Stephen; Waugh, David; King, Gavin; Pierce, Jeffrey; Li, Zhengyan; Leaitch, Richard; Ward, Tony J.; Palmer, Paul I.

    2013-04-01

    During the summer of 2011, 42 days of contiguous PM2.5 filter samples were collected in Halifax, Nova Scotia as part of an international study (BORTAS) to study boreal biomass burning plumes as they travel across Canada towards the Atlantic. This international study was led by the University of Edinburgh in collaboration with partners in North America and Europe. The aim of the PM2.5 filter sampling was to apportion the source contribution to the total PM2.5 mass concentration in Halifax for the purposes of BORTAS. Sampling was conducted on the roof of a Dalhousie University building at a height of 15 m. The building is located in a residential area of Halifax. Continuous black carbon (BC) was measured using a Magee AE-42 aethalometer. Continuous PM1.0 associated organic carbon was measured using an Aerodyne, Aerosol Chemical Speciation Monitor. Daily teflon filter samples were collected for the determination of fine (PM2.5) and coarse (PM2.5-10) particulate mass. An additional, daily, nylon filter was used for the determination of PM2.5 cations and anions by IC. The PM2.5 teflon filter was analysed for 33 metals by XRF and 10 trace metals by ICP-MS. A quartz filter was analysed for the biomass burning marker levoglucosan by GC-MS following derivatization. Excellent agreement (R2 = 0.88) was observed between continuous and filter based measurements with a gradient of 2.76. Median (min:max) fine and coarse PM mass concentrations were found to be 3.9 (0.08:13.7) and 8.5 (0.6:24.9) μg-m3 respectively. Median (min:max) continuous BC = 0.27 (0.009:3.20); SO4 = 0.10 (0:2.0); NO3 = 0.033 (0:0.45); OC = 0.80 (0:14.6); NH4 = 0.054 (0:0.79); Cl = 0.002 (0:0.09) μg-m3 respectively. Receptor modelling was conducted using two methods, USEPA Positive Matrix Factorization and USEPA Chemical Mass Balance. The PMF results showed percent source contribution from biomass burning in Halifax to be 8.0%, vehicles 9.9%, ship emissions 6.0%, surficial material 11.9%, long

  16. Importance of mineral dust and anthropogenic pollutants mixing during a long-lasting high PM event over East Asia.

    PubMed

    Wang, Zhe; Pan, Xiaole; Uno, Itsushi; Chen, Xueshun; Yamamoto, Shigekazu; Zheng, Haitao; Li, Jie; Wang, Zifa

    2018-03-01

    A long-lasting high particulate matter (PM) concentration episode persisted over East Asia from May 24 to June 3, 2014. The Nested Air Quality Prediction Model System (NAQPMS) was used to investigate the mixing of dust and anthropogenic pollutants during this episode. Comparison of observations revealed that the NAQPMS successfully reproduced the time series PM 2.5 and PM 10 concentrations, as well as the nitrate and sulfate concentrations in fine (aerodynamic diameter ≤ 2.5 μm) and coarse mode (2.5 μm < aerodynamic diameter ≤ 10 μm). This episode originated from two dust events that occurred in the inland desert areas of Mongolia and China, and then the long-range transported dust and anthropogenic pollutants were trapped over the downwind region of East Asia for more than one week due to the blocked north Pacific subtropical high-pressure system over the east of Japan. The model results showed that mineral dust accounted for 53-83% of PM 10 , and 39-67% of PM 2.5 over five cities in East Asia during this episode. Sensitivity analysis indicated that the Qingdao and Seoul regions experienced dust and pollution twice, by direct transport from the dust source region and from dust detoured over the Shanghai area. The results of the NAQPMS model confirmed the importance of dust heterogeneous reactions (HRs) over East Asia. Simulated dust NO 3 - concentrations accounted for 75% and 84% of total NO 3 - in fine and coarse mode, respectively, in Fukuoka, Japan. The horizontal distribution of model results revealed that the ratio of dust NO 3 - /dust concentration increased from about 1% over the Chinese land mass to a maximum of 8% and 6% respectively in fine and coarse mode over the ocean to the southeast of Japan, indicating that dust NO 3 - was mainly formed over the Yellow Sea and the East China Sea before reaching Japan. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Sources and chemical composition of atmospheric fine and coarse particles in the Helsinki area

    NASA Astrophysics Data System (ADS)

    Pakkanen, Tuomo A.; Loukkola, Kati; Korhonen, Christina H.; Aurela, Minna; Mäkelä, Timo; Hillamo, Risto E.; Aarnio, Päivi; Koskentalo, Tarja; Kousa, Anu; Maenhaut, Willy

    During April 1996-June 1997 size-segregated atmospheric aerosol particles were collected at an urban and a rural site in the Helsinki area by utilising virtual impactors (VI) and Berner low-pressure impactors (BLPI). In addition, VI samples were collected at a semi-urban site during October 1996-May 1997. The average PM 2.3 (fine particle) concentrations at the urban and rural sites were 11.8 and 8.4 μg/m 3, and the PM 2.3-15 (coarse particle) concentrations were 12.8 and about 5 μg/m 3, respectively. The difference in fine particle mass concentrations suggests that on average, more than one third of the fine mass at the urban site is of local origin. Evaporation of fine particle nitrate from the VI Teflon filters during sampling varied similarly at the three sites, the average evaporation being about 50-60%. The average fine particle concentrations of the chemical components (25 elements and 13 ions) appeared to be fairly similar at the three sites for most components, which suggests that despite the long-range transport, the local emissions of these components were relatively evenly distributed in the Helsinki area. Exceptions were the average fine particles Ba, Fe, Sb and V concentrations that were clearly highest at the urban site pointing to traffic (Ba, Fe, Sb) and to combustion of heavy fuel oil (V) as the likely local sources. The average coarse particle concentrations for most components were highest at the urban site and lowest at the rural site. Average chemical composition of fine particles was fairly similar at the urban and rural sites: non-analysed fraction (mainly carbonaceous material and water) 43% and 37%, sulphate 21% and 25%, crustal matter 12% and 13%, nitrate 12% and 11%, ammonium 9% and 10% and sea-salt 2.5% and 3.2%, respectively. At the semi-urban site also, the average fine particle composition was similar. At the urban site, the year round average composition of coarse particles was dominated by crustal matter (59%) and the non

  18. Differentiating the effects of fine and coarse particles on daily mortality in Shanghai, China

    PubMed Central

    Kan, Haidong; London, Stephanie J.; Chen, Guohai; Zhang, Yunhui; Song, Guixiang; Zhao, Naiqing; Jiang, Lili; Chen, Bingheng

    2007-01-01

    The findings on health effects of ambient fine particles (PM2.5) and coarse particles (PM10-2.5) remain inconsistent. In China, PM2.5 and PM10-2.5 are not the criteria air pollutants, and their monitoring data are scarce. There have been no epidemiological studies of health effects of PM2.5 and PM10-2.5 simultaneously in China. We conducted a time series study to examine the acute effects of PM2.5 and PM10-2.5 on daily mortality in Shanghai, China from Mar. 4, 2004 to Dec. 31, 2005. We used the generalized additive model (GAM) with penalized splines to analyze the mortality, air pollution and covariate data. The average concentrations of PM2.5 and PM10-2.5 were 56.4µg/m3 and 52.3µg/m3 in our study period, and PM2.5 constituted around 53.0% of the PM10 mass. Compared with the Global Air Quality Guidelines set by World Health Organization (10µg/m3 for annual mean) and U.S. National Ambient Air Quality Standards (15µg/m3 for annual mean), the PM2.5 level in Shanghai was much higher. We found that PM2.5 was associated with the death rates from all causes and from cardio-respiratory diseases in Shanghai. We did not find a significant effect of PM10-2.5 on mortality outcomes. A10µg/m3 increase in the 2-day moving average (lag01) concentration of PM2.5 corresponded to 0.36% (95%CI 0.11%, 0.61%), 0.41% (95% CI 0.01%, 0.82%) and 0.95% (95% CI 0.16%, 1.73%) increase of total, cardiovascular and respiratory mortality. For PM10-2.5, the effects were attenuated and less precise. Our analyses provide the first statistically significant evidence in China that PM2.5 has an adverse effect on population health and strengthen the rationale for further limiting levels of PM2.5 in outdoor air in Shanghai. PMID:17229464

  19. An evaluation of the impact of flooring types on exposures to fine and coarse particles within the residential micro-environment using CONTAM.

    PubMed

    Bramwell, Lisa; Qian, Jing; Howard-Reed, Cynthia; Mondal, Sumona; Ferro, Andrea R

    2016-01-01

    Typical resuspension activities within the home, such as walking, have been estimated to contribute up to 25% of personal exposures to PM10. Chamber studies have shown that for moderate walking intensities, flooring type can impact the rate at which particles are re-entrained into the air. For this study, the impact of residential flooring type on incremental average daily (24 h) time-averaged exposure was investigated. Distributions of incremental time-averaged daily exposures to fine and coarse PM while walking within the residential micro-environment were predicted using CONTAM, the multizone airflow and contaminant transport program of the National Institute of Standards and Technology. Knowledge of when and where a person was walking was determined by randomly selecting 490 daily diaries from the EPA's consolidated human activity database (CHAD). On the basis of the results of this study, residential flooring type can significantly impact incremental time-averaged daily exposures to coarse and fine particles (α=0.05, P<0.05, N=490, Kruskal-Wallis test) with high-density cut pile carpeting resulting in the highest exposures. From this study, resuspension from walking within the residential micro-environment contributed 6-72% of time-averaged daily exposures to PM10.

  20. GUIDELINES FOR THE APPLICATION OF SEM/EDX ANALYTICAL TECHNIQUES FOR FINE AND COARSE PM SAMPLES

    EPA Science Inventory

    Scanning Electron Microscopy (SEM) coupled with Energy-Dispersive X-ray analysis (EDX) is a powerful tool in the characterization and source apportionment of environmental particulate matter (PM), providing size, chemistry, and morphology of particles as small as a few tenths ...

  1. Estimation of the contributions of long range transported aerosol in East Asia to carbonaceous aerosol and PM concentrations in Seoul, Korea using highly time resolved measurements: a PSCF model approach.

    PubMed

    Jeong, Ukkyo; Kim, Jhoon; Lee, Hanlim; Jung, Jinsang; Kim, Young J; Song, Chul H; Koo, Ja-Ho

    2011-07-01

    The contributions of long range transported aerosol in East Asia to carbonaceous aerosol and particulate matter (PM) concentrations in Seoul, Korea were estimated with potential source contribution function (PSCF) calculations. Carbonaceous aerosol (organic carbon (OC) and elemental carbon (EC)), PM(2.5), and PM(10) concentrations were measured from April 2007 to March 2008 in Seoul, Korea. The PSCF and concentration weighted trajectory (CWT) receptor models were used to identify the spatial source distributions of OC, EC, PM(2.5), and coarse particles. Heavily industrialized areas in Northeast China such as Harbin and Changchun and East China including the Pearl River Delta region, the Yangtze River Delta region, and the Beijing-Tianjin region were identified as high OC, EC and PM(2.5) source areas. The conditional PSCF analysis was introduced so as to distinguish the influence of aerosol transported from heavily polluted source areas on a receptor site from that transported from relatively clean areas. The source contributions estimated using the conditional PSCF analysis account for not only the aerosol concentrations of long range transported aerosols but also the number of transport days effective on the measurement site. Based on the proposed algorithm, the condition of airmass pathways was classified into two types: one condition where airmass passed over the source region (PS) and another condition where airmass did not pass over the source region (NPS). For most of the seasons during the measurement period, 249.5-366.2% higher OC, EC, PM(2.5), and coarse particle concentrations were observed at the measurement site under PS conditions than under NPS conditions. Seasonal variations in the concentrations of OC, EC, PM(2.5), and coarse particles under PS, NPS, and background aerosol conditions were quantified. The contributions of long range transported aerosols on the OC, EC, PM(2.5), and coarse particle concentrations during several Asian dust events were

  2. PubChem BioAssay: 2017 update

    PubMed Central

    Wang, Yanli; Bryant, Stephen H.; Cheng, Tiejun; Wang, Jiyao; Gindulyte, Asta; Shoemaker, Benjamin A.; Thiessen, Paul A.; He, Siqian; Zhang, Jian

    2017-01-01

    PubChem's BioAssay database (https://pubchem.ncbi.nlm.nih.gov) has served as a public repository for small-molecule and RNAi screening data since 2004 providing open access of its data content to the community. PubChem accepts data submission from worldwide researchers at academia, industry and government agencies. PubChem also collaborates with other chemical biology database stakeholders with data exchange. With over a decade's development effort, it becomes an important information resource supporting drug discovery and chemical biology research. To facilitate data discovery, PubChem is integrated with all other databases at NCBI. In this work, we provide an update for the PubChem BioAssay database describing several recent development including added sources of research data, redesigned BioAssay record page, new BioAssay classification browser and new features in the Upload system facilitating data sharing. PMID:27899599

  3. Influence of Saharan dust outbreaks and carbon content on oxidative potential of water-soluble fractions of PM2.5 and PM10

    NASA Astrophysics Data System (ADS)

    Chirizzi, Daniela; Cesari, Daniela; Guascito, Maria Rachele; Dinoi, Adelaide; Giotta, Livia; Donateo, Antonio; Contini, Daniele

    2017-08-01

    Exposure to atmospheric particulate matter (PM) leads to adverse health effects although the exact mechanisms of toxicity are still poorly understood. Several studies suggested that a large number of PM health effects could be due to the oxidative potential (OP) of ambient particles leading to high concentrations of reactive oxygen species (ROS). The contribution to OP of specific anthropogenic sources like road traffic, biomass burning, and industrial emissions has been investigated in several sites. However, information about the OP of natural sources are scarce and no data is available regarding the OP during Saharan dust outbreaks (SDO) in Mediterranean regions. This work uses the a-cellular DTT (dithiothreitol) assay to evaluate OP of the water-soluble fraction of PM2.5 and PM10 collected at an urban background site in Southern Italy. OP values in three groups of samples were compared: standard characterised by concentrations similar to the yearly averages; high carbon samples associated to combustion sources (mainly road traffic and biomass burning) and SDO events. DTT activity normalised by sampled air volume (DTTV), representative of personal exposure, and normalised by collected aerosol mass (DTTM), representing source-specific characteristics, were investigated. The DTTV is larger for high PM concentrations. DTTV is well correlated with secondary organic carbon concentration. An increased DTTV response was found for PM2.5 compared to the coarse fraction PM2.5-10. DTTV is larger for high carbon content samples but during SDO events is statistically comparable with that of standard samples. DTTM is larger for PM2.5 compared to PM10 and the relative difference between the two size fractions is maximised during SDO events. This indicates that Saharan dust advection is a natural source of particles having a lower specific OP with respect to the other sources acting on the area (for water-soluble fraction). OP should be taken into account in epidemiological

  4. Predictive coarse-graining

    NASA Astrophysics Data System (ADS)

    Schöberl, Markus; Zabaras, Nicholas; Koutsourelakis, Phaedon-Stelios

    2017-03-01

    We propose a data-driven, coarse-graining formulation in the context of equilibrium statistical mechanics. In contrast to existing techniques which are based on a fine-to-coarse map, we adopt the opposite strategy by prescribing a probabilistic coarse-to-fine map. This corresponds to a directed probabilistic model where the coarse variables play the role of latent generators of the fine scale (all-atom) data. From an information-theoretic perspective, the framework proposed provides an improvement upon the relative entropy method [1] and is capable of quantifying the uncertainty due to the information loss that unavoidably takes place during the coarse-graining process. Furthermore, it can be readily extended to a fully Bayesian model where various sources of uncertainties are reflected in the posterior of the model parameters. The latter can be used to produce not only point estimates of fine-scale reconstructions or macroscopic observables, but more importantly, predictive posterior distributions on these quantities. Predictive posterior distributions reflect the confidence of the model as a function of the amount of data and the level of coarse-graining. The issues of model complexity and model selection are seamlessly addressed by employing a hierarchical prior that favors the discovery of sparse solutions, revealing the most prominent features in the coarse-grained model. A flexible and parallelizable Monte Carlo - Expectation-Maximization (MC-EM) scheme is proposed for carrying out inference and learning tasks. A comparative assessment of the proposed methodology is presented for a lattice spin system and the SPC/E water model.

  5. Predictive coarse-graining

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Schöberl, Markus, E-mail: m.schoeberl@tum.de; Zabaras, Nicholas; Department of Aerospace and Mechanical Engineering, University of Notre Dame, 365 Fitzpatrick Hall, Notre Dame, IN 46556

    We propose a data-driven, coarse-graining formulation in the context of equilibrium statistical mechanics. In contrast to existing techniques which are based on a fine-to-coarse map, we adopt the opposite strategy by prescribing a probabilistic coarse-to-fine map. This corresponds to a directed probabilistic model where the coarse variables play the role of latent generators of the fine scale (all-atom) data. From an information-theoretic perspective, the framework proposed provides an improvement upon the relative entropy method and is capable of quantifying the uncertainty due to the information loss that unavoidably takes place during the coarse-graining process. Furthermore, it can be readily extendedmore » to a fully Bayesian model where various sources of uncertainties are reflected in the posterior of the model parameters. The latter can be used to produce not only point estimates of fine-scale reconstructions or macroscopic observables, but more importantly, predictive posterior distributions on these quantities. Predictive posterior distributions reflect the confidence of the model as a function of the amount of data and the level of coarse-graining. The issues of model complexity and model selection are seamlessly addressed by employing a hierarchical prior that favors the discovery of sparse solutions, revealing the most prominent features in the coarse-grained model. A flexible and parallelizable Monte Carlo – Expectation–Maximization (MC-EM) scheme is proposed for carrying out inference and learning tasks. A comparative assessment of the proposed methodology is presented for a lattice spin system and the SPC/E water model.« less

  6. Associations between fine particle, coarse particle, black carbon and hospital visits in a Chinese city.

    PubMed

    Wang, Xi; Chen, Renjie; Meng, Xia; Geng, Fuhai; Wang, Cuicui; Kan, Haidong

    2013-08-01

    China is one of the countries with the highest ambient particle levels in the world; however, there have been no epidemiologic studies examining the effects of fine particle (PM2.5), coarse particle (PM10-2.5) and black carbon (BC) simultaneously on morbidity outcomes. In this study, we conducted a time-series analysis to evaluate the acute effects of PM2.5, PM10-2.5, and BC on daily hospital visits in Shanghai, China. During our study period, the mean daily concentrations of PM2.5, PM10-2.5 and BC were 53.9 μg/m(3), 38.4 μg/m(3) and 3.9 μg/m(3), respectively. We found significant associations of PM2.5, PM 10-2.5, and BC with daily hospital visits. An inter-quartile range increase of the average concentrations of the current and previous days in PM2.5, PM10-2.5 and BC was associated with a 1.88% (95% CI: 0.69% to 3.06%), a 1.30% (95% CI: 0.25% to 2.34%) and a 1.33% (95% CI: 0.34% to 2.32%) increase in emergency-room visits, respectively. For outpatient visits, the corresponding estimated changes were -2.44% (95% CI: -6.62% to 1.74%), 1.09% (95% CI: -2.72% to 4.90%) and 3.34% (95% CI: 0.10% to 6.57%) respectively. The effects of BC were more robust than the effects of PM2.5 and PM10-2.5 in two-pollutant models. To our knowledge, this is the first study in China, or even in Asian developing countries, to report the effect of PM2.5, PM10-2.5, and BC simultaneously on morbidity. Our findings also suggest that BC could serve as a valuable air quality indicator that reflects the health risks of airborne particles. Copyright © 2013 Elsevier B.V. All rights reserved.

  7. Estimating the acute effects of fine and coarse particle pollution on stroke mortality of in six Chinese subtropical cities.

    PubMed

    Wang, Xiaojie; Qian, Zhengmin; Wang, Xiaojie; Hong, Hua; Yang, Yin; Xu, Yanjun; Xu, Xiaojun; Yao, Zhenjiang; Zhang, Lingli; Rolling, Craig A; Schootman, Mario; Liu, Tao; Xiao, Jianpeng; Li, Xing; Zeng, Weilin; Ma, Wenjun; Lin, Hualiang

    2018-05-08

    While increasing evidence suggested that PM 2.5 is the most harmful fraction of the particle pollutants, the health effects of coarse particles (PM 10-2.5 ) have been inconclusive, especially on cerebrovascular diseases, we thus evaluated the effects of PM 10 , PM 2.5 , and PM 10-2.5 on stroke mortality in six Chinese subtropical cities using generalized additive models. We also conducted random-effects meta-analyses to estimate the overall effects across the six cities. We found that PM 10 , PM 2.5 , and PM 10-2.5 were significantly associated with stroke mortality. Each 10 μg/m 3 increase of PM 10 , PM 2.5 and PM 10-2.5 (lag03) was associated with an increase of 1.88% (95% CI: 1.37%, 2.39%), 3.07% (95% CI: 2.35%, 3.79%), and 5.72% (95% CI: 3.82%, 7.65%) in overall stroke mortality. Using the World Health Organization's guideline as reference concentration, we estimated that 3.21% (95% CI: 1.65%, 3.01%) of stroke mortality (corresponding to 1743 stroke mortalities, 95% CI: 896, 1633) were attributed to PM 10 , 5.57% (95% CI: 0.50%, 1.23%) stroke mortality (3019, 95% CI: 2286, 3777) were attributed to PM 2.5 , and 2.02% (95% CI: 1.85%, 3.08%) of stroke mortality (1097, 95% CI: 1005, 1673) could be attributed to PM 10-2.5 . Our analysis indicates that both PM 2.5 and PM 10-2.5 are important risk factors of stroke mortality and should be considered in the prevention and control of stroke in the study area. Copyright © 2018 Elsevier Ltd. All rights reserved.

  8. Circular Bioassay Platforms for Applications in Microwave-Accelerated Techniques.

    PubMed

    Mohammed, Muzaffer; Clement, Travis C; Aslan, Kadir

    2014-12-02

    In this paper, we present the design of four different circular bioassay platforms, which are suitable for homogeneous microwave heating, using theoretical calculations (i.e., COMSOL™ multiphysics software). Circular bioassay platforms are constructed from poly(methyl methacrylate) (PMMA) for optical transparency between 400-800 nm, has multiple sample capacity (12, 16, 19 and 21 wells) and modified with silver nanoparticle films (SNFs) to be used in microwave-accelerated bioassays (MABs). In addition, a small monomode microwave cavity, which can be operated with an external microwave generator (100 W), for use with the bioassay platforms in MABs is also developed. Our design parameters for the circular bioassay platforms and monomode microwave cavity during microwave heating were: (i) temperature profiles, (ii) electric field distributions, (iii) location of the circular bioassay platforms inside the microwave cavity, and (iv) design and number of wells on the circular bioassay platforms. We have also carried out additional simulations to assess the use of circular bioassay platforms in a conventional kitchen microwave oven (e.g., 900 W). Our results show that the location of the circular bioassay platforms in the microwave cavity was predicted to have a significant effect on the homogeneous heating of these platforms. The 21-well circular bioassay platform design in our monomode microwave cavity was predicted to offer a homogeneous heating pattern, where inter-well temperature was observed to be in between 23.72-24.13°C and intra-well temperature difference was less than 0.21°C for 60 seconds of microwave heating, which was also verified experimentally.

  9. Circular Bioassay Platforms for Applications in Microwave-Accelerated Techniques

    PubMed Central

    Mohammed, Muzaffer; Clement, Travis C.; Aslan, Kadir

    2014-01-01

    In this paper, we present the design of four different circular bioassay platforms, which are suitable for homogeneous microwave heating, using theoretical calculations (i.e., COMSOL™ multiphysics software). Circular bioassay platforms are constructed from poly(methyl methacrylate) (PMMA) for optical transparency between 400–800 nm, has multiple sample capacity (12, 16, 19 and 21 wells) and modified with silver nanoparticle films (SNFs) to be used in microwave-accelerated bioassays (MABs). In addition, a small monomode microwave cavity, which can be operated with an external microwave generator (100 W), for use with the bioassay platforms in MABs is also developed. Our design parameters for the circular bioassay platforms and monomode microwave cavity during microwave heating were: (i) temperature profiles, (ii) electric field distributions, (iii) location of the circular bioassay platforms inside the microwave cavity, and (iv) design and number of wells on the circular bioassay platforms. We have also carried out additional simulations to assess the use of circular bioassay platforms in a conventional kitchen microwave oven (e.g., 900 W). Our results show that the location of the circular bioassay platforms in the microwave cavity was predicted to have a significant effect on the homogeneous heating of these platforms. The 21-well circular bioassay platform design in our monomode microwave cavity was predicted to offer a homogeneous heating pattern, where inter-well temperature was observed to be in between 23.72–24.13°C and intra-well temperature difference was less than 0.21°C for 60 seconds of microwave heating, which was also verified experimentally. PMID:25568813

  10. Observations of fine and coarse particle nitrate at several rural locations in the United States

    NASA Astrophysics Data System (ADS)

    Lee, Taehyoung; Yu, Xiao-Ying; Ayres, Benjamin; Kreidenweis, Sonia M.; Malm, William C.; Collett, Jeffrey L.

    Nitrate comprises an important part of aerosol mass at many non-urban locations during some times of the year. Little is known, however, about the chemical form and size distribution of particulate nitrate in these environments. While submicron ammonium nitrate is often assumed to be the dominant species, this assumption is rarely tested. Properties of aerosol nitrate were characterized at several IMPROVE monitoring sites during a series of field studies. Study sites included Bondville, Illinois (February 2003), San Gorgonio Wilderness Area, California (April and July 2003), Grand Canyon National Park, Arizona (May 2003), Brigantine National Wildlife Refuge, New Jersey (November 2003), and Great Smoky Mountains National Park, Tennessee (July/August 2004). Nitrate was found predominantly in submicron ammonium nitrate particles during the Bondville and San Gorgonio (April) campaigns. Coarse mode nitrate particles, resulting from reactions of nitric acid or its precursors with sea salt or soil dust, were more important at Grand Canyon and Great Smoky Mountains. Both fine and coarse mode nitrate were important during the studies at Brigantine and San Gorgonio (July). These results, which complement earlier findings about the importance of coarse particle nitrate at Yosemite and Big Bend National Parks, suggest a need to more closely examine common assumptions regarding the importance of ammonium nitrate at non-urban sites, to include pathways for coarse mode nitrate formation in regional models, and to consider impacts of coarse particle nitrate on visibility. Because coarse particle nitrate modes often extend well below 2.5 μm aerodynamic diameter, measurements of PM 2.5 nitrate in these environments should not automatically be assumed to contain only ammonium nitrate.

  11. The variability in iron speciation in size fractionated residual oil fly ash particulate matter (ROFA PM).

    PubMed

    Pattanaik, Sidhartha; Huggins, Frank E; Huffman, Gerald P

    2016-08-15

    Ambient particulate matter (PM) containing iron can catalyze Fenton reaction leading to the production of reactive oxygen species in cells. It can also catalyze atmospheric redox reaction. These reactions are governed by the physicochemical characteristics of iron in ambient PM. As a surrogate for ambient PM, we prepared residual oil fly ash PM (ROFA PM) in a practical fire tube boiler firing residual oils with varying sulfur and ash contents. The ROFA particles were resolved into fine PM or PM2.5 (aerodynamic diameter (AD)<2.5μm) and coarse PM or PM2.5+ (AD between 2.5μm and 50μm). The iron speciation in PM2.5+ was ascertained using X-ray absorption spectroscopy and leaching method while that in PM2.5 was reported earlier. The results of both studies are compared to get an insight into the variability in the iron speciation in different size fractions. The results show the predominance of ferric sulfate, with a minor spinal ferrite in both PM (i.e. ZnxNi1-xFe2O4 in PM2.5, ZnFe2O4 in PM2.5+). The iron solubility in ROFA PM depends on its speciation, mode of incorporation of iron into particle's carbonaceous matrix, the grade and composition of oils, and pH of the medium. The soluble fraction of iron in PM is critical in assessing its interaction with the biological systems and its toxic potential. Copyright © 2016 Elsevier B.V. All rights reserved.

  12. The effect of acute exposure to coarse particulate matter air pollution in a rural location on circulating endothelial progenitor cells: results from a randomized controlled study

    PubMed Central

    Brook, Robert D.; Bard, Robert L.; Kaplan, Mariana J.; Yalavarthi, Srilakshmi; Morishita, Masako; Dvonch, J. Timothy; Wang, Lu; Yang, Hui-yu; Spino, Catherine; Mukherjee, Bhramar; Oral, Elif A.; Sun, Qinghua; Brook, Jeffrey R.; Harkema, Jack; Rajagopalan, Sanjay

    2015-01-01

    Context Fine particulate matter (PM) air pollution has been associated with alterations in circulating endothelial progenitor cell (EPC) levels, which may be one mechanism whereby exposures promote cardiovascular diseases. However, the impact of coarse PM on EPCs is unknown. Objective We aimed to determine the effect of acute exposure to coarse concentrated ambient particles (CAP) on circulating EPC levels. Methods Thirty-two adults (25.9±6.6 years) were exposed to coarse CAP (76.2±51.5 μgm−3) in a rural location and filtered air (FA) for 2 h in a randomized double-blind crossover study. Peripheral venous blood was collected 2 and 20 h post-exposures for circulating EPC (n=21), white blood cell (n=24) and vascular endothelial growth factor (VEGF) (n=16–19) levels. The changes between exposures were compared by matched Wilcoxon signed-rank tests. Results Circulating EPC levels were elevated 2 [108.29 (6.24–249.71) EPC mL−1; median (25th–75th percentiles), p=0.052] and 20 h [106.86 (52.91–278.35) EPC mL−1, p=0.008] post-CAP exposure compared to the same time points following FA [38.47 (0.00–84.83) and 50.16 (0.00–104.79) EPC mL−1]. VEGF and white blood cell (WBC) levels did not differ between exposures. Conclusions Brief inhalation of coarse PM from a rural location elicited an increase in EPCs that persisted for at least 20 h. The underlying mechanism responsible may reflect a systemic reaction to an acute “endothelial injury” and/or a circulating EPC response to sympathetic nervous system activation. PMID:23919441

  13. [Investigation on pattern and methods of quality control for Chinese materia medica based on dao-di herbs and bioassay - bioassay for Coptis chinensis].

    PubMed

    Yan, Dan; Xiao, Xiao-he

    2011-05-01

    Establishment of bioassay methods is the technical issues to be faced with in the bioassay of Chinese materia medica. Taking the bioassay of Coptis chinensis Franch. as an example, the establishment process and application of the bioassay methods (including bio-potency and bio-activity fingerprint) were explained from the aspects of methodology, principle of selection, experimental design, method confirmation and data analysis. The common technologies were extracted and formed with the above aspects, so as to provide technical support for constructing pattern and method of the quality control for Chinese materia medica based on the dao-di herbs and bioassay.

  14. A bioaccumulation bioassay for freshwater sediments

    USGS Publications Warehouse

    Mac, Michael J.; Noguchi, George E.; Hesselberg, Robert J.; Edsall, Carol C.; Shoesmith, John A.; Bowker, James D.

    1990-01-01

    A laboratory bioassay is described for determining the bioavailability of contaminants from freshwater sediments. The bioassay consists of 10-d exposures to whole sediments under flow-through conditions. After testing five species, the fathead minnow (Pimephales promelas) and the earthworm (Lubricus terrestris) were recommended for use in the test. When the availability of polychlorinated biphenyls (PCBs), Hg and Zn from Great Lakes sediments was examined in laboratory exposures, only the PCBs were accumulated. A field validation study demonstrated that the magnitude of accumulation in laboratory exposures was similar to that in organisms caged in the field. A protocol is recommended for using the test as a standardized bioaccumulation bioassay.

  15. AIRUSE-LIFE +: estimation of natural source contributions to urban ambient air PM10 and PM2. 5 concentrations in southern Europe - implications to compliance with limit values

    NASA Astrophysics Data System (ADS)

    Diapouli, Evangelia; Manousakas, Manousos I.; Vratolis, Stergios; Vasilatou, Vasiliki; Pateraki, Stella; Bairachtari, Kyriaki A.; Querol, Xavier; Amato, Fulvio; Alastuey, Andrés; Karanasiou, Angeliki A.; Lucarelli, Franco; Nava, Silvia; Calzolai, Giulia; Gianelle, Vorne L.; Colombi, Cristina; Alves, Célia; Custódio, Danilo; Pio, Casimiro; Spyrou, Christos; Kallos, George B.; Eleftheriadis, Konstantinos

    2017-03-01

    The contribution of natural sources to ambient air particulate matter (PM) concentrations is often not considered; however, it may be significant for certain areas and during specific periods of the year. In the framework of the AIRUSE-LIFE+ project, state-of-the-art methods have been employed for assessing the contribution of major natural sources (African dust, sea salt and forest fires) to PM concentrations, in southern European urban areas. 24 h measurements of PM10 and PM2. 5 mass and chemical composition were performed over the course of a year in five cities: Porto, Barcelona, Milan, Florence and Athens. Net African dust and sea-salt concentrations were calculated based on the methodologies proposed by the EC (SEC 2011/208). The contribution of uncontrolled forest fires was calculated through receptor modelling. Sensitivity analysis with respect to the calculation of African dust was also performed, in order to identify major parameters affecting the estimated net dust concentrations. African dust contribution to PM concentrations was more pronounced in the eastern Mediterranean, with the mean annual relative contribution to PM10 decreasing from 21 % in Athens, to 5 % in Florence, and around 2 % in Milan, Barcelona and Porto. The respective contribution to PM2. 5 was calculated equal to 14 % in Athens and from 1.3 to 2.4 % in all other cities. High seasonal variability of contributions was observed, with dust transport events occurring at different periods in the western and eastern Mediterranean basin. Sea salt was mostly related to the coarse mode and also exhibited significant seasonal variability. Sea-salt concentrations were highest in Porto, with average relative contributions equal to 12.3 % for PM10. Contributions from uncontrolled forest fires were quantified only for Porto and were low on an annual basis (1.4 and 1.9 % to PM10 and PM2. 5, respectively); nevertheless, contributions were greatly increased during events, reaching 20 and 22 % of 24 h

  16. Mass concentration, composition and sources of fine and coarse particulate matter in Tijuana, Mexico, during Cal-Mex campaign

    NASA Astrophysics Data System (ADS)

    Minguillón, María Cruz; Campos, Arturo Alberto; Cárdenas, Beatriz; Blanco, Salvador; Molina, Luisa T.; Querol, Xavier

    2014-05-01

    This work was carried out in the framework of the Cal-Mex project, which focuses on investigating the atmosphere along Mexico-California border region. Sampling was carried out at two sites located in Tijuana urban area: Parque Morelos and Metales y Derivados. PM2.5 and PM10 24 h samples were collected every three days from 17th May 2010 to 27th June 2010, and were used for gravimetric and chemical analyses (major and minor elements, inorganic ions, organic and elemental carbon) of PM. A subsequent Positive Matrix Factorization (PMF) analysis was performed. PM2.5 and PM10 average concentrations during Cal-Mex were relatively lower compared to usual annual averages. Trace elements concentrations recorded in the present study were lower than those recorded in Mexico City in 2006, with the exception of Pb at Metales y Derivados, attributed to the influence of a specific industrial source, which also includes As, Cd and Tl. Apart from this industrial source, both urban sites were found to be affected by similar sources with respect to bulk PM. Fine PM (PM2.5) was mainly apportioned by fueloil and biomass combustion and secondary aerosols, and road traffic. Coarse PM (PM2.5-10) was mainly apportioned by a mineral source (sum of road dust resuspension, construction emissions and natural soil) and fresh and aged sea salt. The road traffic was responsible for more than 60% of the fine elemental carbon and almost 40% of the fine organic matter.

  17. Identification and characterization of fine and coarse particulate matter sources in a middle-European urban environment

    NASA Astrophysics Data System (ADS)

    Kertész, Zs.; Szoboszlai, Z.; Angyal, A.; Dobos, E.; Borbély-Kiss, I.

    2010-06-01

    In this work a source apportionment study is presented which aimed to characterize the PM 2.5 and PM 2.5-10 sources in the urban area of Debrecen, East-Hungary by using streaker samples, IBA methods and positive matrix factorization (PMF) analysis. Samples of fine (PM 2.5) and coarse (PM 2.5-10) urban particulate matter were collected with 2 h time resolution in the frame of five sampling campaigns during 2007-2009 in different seasons in the downtown of Debrecen. Elemental concentrations from Al to Pb of over 1000 samples were obtained by particle induced X-ray emission (PIXE); concentrations of black carbon (BC) were determined with a smoke stain reflectometer. On this data base source apportionment was carried out by using the PMF method. Seven factors were identified for both size fractions, including soil dust, traffic, secondary aerosol - sulphates, domestic heating, oil combustion, agriculture and an unknown factor enriched with chlorine. Seasonal and daily variation of the different factors was studied as well as their dependence on meteorological parameters. Besides determining the time patterns characteristic to the city, several emission episodes were identified including a Saharan dust intrusion on 21st-24th May, 2008.

  18. A new P. putida instrumental toxicity bioassay.

    PubMed

    Figueredo, Federico; Abrevaya, Ximena C; Cortón, Eduardo

    2015-05-01

    Here, we present a new toxicity bioassay (CO2-TOX), able to detect toxic or inhibitory compounds in water samples, based on the quantification of Pseudomonas putida KT2440 CO2 production. The metabolically produced CO2 was measured continuously and directly in the liquid assay media, with a potentiometric gas electrode. The optimization studies were performed using as a model toxicant 3,5-DCP (3,5-dichlorophenol); later, heavy metals (Pb(2+), Cu(2+), or Zn(2+)) and a metalloid (As(5+)) were assayed. The response to toxics was evident after 15 min of incubation and at relatively low concentrations (e.g., 1.1 mg/L of 3,5-DCP), showing that the CO2-TOX bioassay is fast and sensitive. The EC50 values obtained were 4.93, 0.12, 6.05, 32.17, and 37.81 mg/L for 3,5-DCP, Cu(2+), Zn(2+), As(5+), and Pb(2+), respectively, at neutral pH. Additionally, the effect of the pH of the sample and the use of lyophilized bacteria were also analyzed showing that the bioassay can be implemented in different conditions. Moreover, highly turbid samples and samples with very low oxygen levels were measured successfully with the new instrumental bioassay described here. Finally, simulated samples containing 3,5-DCP or a heavy metal mixture were tested using the proposed bioassay and a standard ISO bioassay, showing that our test is more sensible to the phenol but less sensible to the metal mixtures. Therefore, we propose CO2-TOX as a rapid, sensitive, low-cost, and robust instrumental bioassay that could perform as an industrial wastewater-process monitor among other applications.

  19. The Aerosol Coarse Mode Initiative

    NASA Astrophysics Data System (ADS)

    Arnott, W. P.; Adhikari, N.; Air, D.; Kassianov, E.; Barnard, J.

    2014-12-01

    Many areas of the world show an aerosol volume distribution with a significant coarse mode and sometimes a dominant coarse mode. The large coarse mode is usually due to dust, but sea salt aerosol can also play an important role. However, in many field campaigns, the coarse mode tends to be ignored, because it is difficult to measure. This lack of measurements leads directly to a concomitant "lack of analysis" of this mode. Because, coarse mode aerosols can have significant effects on radiative forcing, both in the shortwave and longwave spectrum, the coarse mode -- and these forcings -- should be accounted for in atmospheric models. Forcings based only on fine mode aerosols have the potential to be misleading. In this paper we describe examples of large coarse modes that occur in areas of large aerosol loading (Mexico City, Barnard et al., 2010) as well as small loadings (Sacramento, CA; Kassianov et al., 2012; and Reno, NV). We then demonstrate that: (1) the coarse mode can contribute significantly to radiative forcing, relative to the fine mode, and (2) neglecting the coarse mode may result in poor comparisons between measurements and models. Next we describe -- in general terms -- the limitations of instrumentation to measure the coarse mode. Finally, we suggest a new initiative aimed at examining coarse mode aerosol generation mechanisms; transport and deposition; chemical composition; visible and thermal IR refractive indices; morphology; microphysical behavior when deposited on snow and ice; and specific instrumentation needs. Barnard, J. C., J. D. Fast, G. Paredes-Miranda, W. P. Arnott, and A. Laskin, 2010: Technical Note: Evaluation of the WRF-Chem "Aerosol Chemical to Aerosol Optical Properties" Module using data from the MILAGRO campaign, Atmospheric Chemistry and Physics, 10, 7325-7340. Kassianov, E. I., M. S. Pekour, and J. C. Barnard, 2012: Aerosols in Central California: Unexpectedly large contribution of coarse mode to aerosol radiative forcing

  20. Brine Shrimp Bioassays: A Useful Technique in Biological Investigations

    ERIC Educational Resources Information Center

    Rice, Stanley A.; Maness, Ian B.

    2004-01-01

    A technique to measure the potency of leaf compounds against herbivores with the use of a bioassay is described. Bioassays are useful in classes where students have career plans like medicine in which bioassays can be used as tools for screening plants for possible medicinal potency.

  1. The Research Triangle Park particulate matter panel study: PM mass concentration relationships

    NASA Astrophysics Data System (ADS)

    Williams, Ron; Suggs, Jack; Rea, Anne; Leovic, Kelly; Vette, Alan; Croghan, Carry; Sheldon, Linda; Rodes, Charles; Thornburg, Jonathan; Ejire, Ademola; Herbst, Margaret; Sanders, William

    The US Environmental Protection Agency has recently performed the Research Triangle Park Particulate Matter Panel Study. This was a 1-year investigation of PM and related co-pollutants involving participants living within the RTP area of North Carolina. Primary goals were to characterize the relationships between ambient and residential PM measures to those obtained from personal exposure monitoring and estimate ambient source contributions to personal and indoor mass concentrations. A total of 38 participants living in 37 homes were involved in personal, residential indoor, residential outdoor and ambient PM 2.5 exposure monitoring. Participants were 30 non-smoking hypertensive African-Americans living in a low-moderate SES neighborhood (SE Raleigh, NC) and a cohort of eight individuals having implanted cardiac defibrillators (Chapel Hill, NC). Residential and ambient monitoring of PM 10 and PM 10-2.5 (coarse by differential) was also performed. The volunteers were monitored for seven consecutive days during each of four seasons (summer 2000, fall 2000, winter 2001, spring 2001). Individual PM 2.5 personal exposure concentrations ranged from 4 to 218 μg m -3 during the study. The highest personal exposures were determined to be the result of passive environmental tobacco exposures. Subsequently, ˜7% of the total number of personal exposure trials were excluded to minimize this pollutant's effect upon the overall analysis. Results indicated that a pooled data set (seasons, cohorts, residences, participants) was appropriate for investigation of the basic mass concentration relationships. Daily personal PM 2.5 mass concentrations were typically higher than their associated residential or ambient measurements (mean personal=23.0, indoor=19.1, outdoor=19.3, ambient=19.2 μg m -3). Mean personal PM 2.5 exposures were observed to be only moderately correlated to ambient PM 2.5 concentrations ( r=0.39).

  2. Indoor PM1, PM2.5, PM10 and outdoor PM2.5 concentrations in primary schools in Sari, Iran.

    PubMed

    Mohammadyan, Mahmoud; Shabankhani, Bijan

    2013-09-01

    This study was carried out to determine the distribution of particles in classrooms in primary schools located in the centre of the city of Sari, Iran and identify the relationship between indoor classroom particle levels and outdoor PM2.5 concentrations. Outdoor PM2.5 and indoor PM1, PM2.5, and PM10 were monitored using a real-time Micro Dust Pro monitor and a GRIMM monitor, respectively. Both monitors were calibrated by gravimetric method using filters. The Kolmogorov-Smirnov test showed that all indoor and outdoor data fitted normal distribution. Mean indoor PM1, PM2.5, PM10 and outdoor PM2.5 concentrations for all of the classrooms were 17.6 μg m(-3), 46.6 μg m(-3), 400.9 μg m(-3), and 36.9 μg m(-3), respectively. The highest levels of indoor and outdoor PM2.5 concentrations were measured at the Shahed Boys School (69.1 μg m(-3) and 115.8 μg m(-3), respectively). The Kazemi school had the lowest levels of indoor and outdoor PM2.5 (29.1 μg m(-3) and 15.5 μg m(-3), respectively). In schools located near both main and small roads, the association between indoor fine particle (PM2.5 and PM1) and outdoor PM2.5 levels was stronger than that between indoor PM10 and outdoor PM2.5 levels. Mean indoor PM2.5 and PM10 and outdoor PM2.5 were higher than the standards for PM2.5 and PM10, and there was a good correlation between indoor and outdoor fine particle concentrations.

  3. Water soluble aerosols and gases at a UK background site - Part 1: Controls of PM2.5 and PM10 aerosol composition

    NASA Astrophysics Data System (ADS)

    Twigg, M. M.; Di Marco, C. F.; Leeson, S.; van Dijk, N.; Jones, M. R.; Leith, I. D.; Morrison, E.; Coyle, M.; Proost, R.; Peeters, A. N. M.; Lemon, E.; Frelink, T.; Braban, C. F.; Nemitz, E.; Cape, J. N.

    2015-02-01

    There is limited availability of long-term, high temporal resolution, chemically speciated aerosol measurements, which can lead to further insight into the health and environmental impacts of particulate matter. The Monitor for AeRosols and Gases (MARGA, Applikon B.V., NL) allows characterisation of the inorganic components of PM10 and PM2.5 (NH4+, NO3-, SO42-, Cl-, Na+, K+, Ca2+, Mg2+) and inorganic reactive gases (NH3, SO2, HCl, HONO and HNO3) at hourly resolution. The following study presents 6.5 years (June 2006 to December 2012) of quasi-continuous observations of PM2.5 and PM10 using the MARGA at the UK EMEP "Supersite", Auchencorth Moss, SE Scotland. Auchencorth Moss was found to be representative of a remote European site with average total water soluble inorganic mass of PM2.5 of 3.82 μg m-3. Anthropogenically derived secondary inorganic aerosols (sum of NH4+, NO3- and nss-SO42-), were the dominating species (63%) of PM2.5. In terms of equivalent concentrations, NH4+ provided the single largest contribution to PM2.5 fraction in all seasons. Sea salt, was the main component (73%) of the PMcoarse fraction (PM10-PM2.5), though NO3- was also found to make a relatively large contribution to the measured mass (17%) as providing evidence of considerable processing of sea salt in the coarse mode. There was on occasions evidence of aerosol from combustion events being transported to the site in 2012 as high K+ concentrations (deviating from the known ratio in sea salt) coincided with increases in black carbon at the site. Pollution events in PM10 (defined as concentrations > 12 μg m-3) were on average dominated by NH4+ and NO3-, where as smaller loadings at the site tended to be dominated by sea salt. As with other Western European sites, the charge balance of the inorganic components resolved were biased towards cations, suggesting the aerosol was basic or more likely, that organic acids contributed to the charge

  4. Water soluble aerosols and gases at a UK background site - Part 1: Controls of PM2.5 and PM10 aerosol composition

    NASA Astrophysics Data System (ADS)

    Twigg, M. M.; Di Marco, C. F.; Leeson, S.; van Dijk, N.; Jones, M. R.; Leith, I. D.; Morrison, E.; Coyle, M.; Proost, R.; Peeters, A. N. M.; Lemon, E.; Frelink, T.; Braban, C. F.; Nemitz, E.; Cape, J. N.

    2015-07-01

    There is limited availability of long-term, high temporal resolution, chemically speciated aerosol measurements which can provide further insight into the health and environmental impacts of particulate matter. The Monitor for AeRosols and Gases (MARGA, Applikon B.V., NL) allows for the characterisation of the inorganic components of PM10 and PM2.5 (NH4+, NO3-, SO42-, Cl-, Na+, K+, Ca2+, Mg2+) and inorganic reactive gases (NH3, SO2, HCl, HONO and HNO3) at hourly resolution. The following study presents 6.5 years (June 2006 to December 2012) of quasi-continuous observations of PM2.5 and PM10 using the MARGA at the UK EMEP supersite, Auchencorth Moss, SE Scotland. Auchencorth Moss was found to be representative of a remote European site with average total water soluble inorganic mass of PM2.5 of 3.82 μg m-3. Anthropogenically derived secondary inorganic aerosols (sum of NH4+, NO3- and nss-SO42-) were the dominating species (63 %) of PM2.5. In terms of equivalent concentrations, NH4+ provided the single largest contribution to PM2.5 fraction in all seasons. Sea salt was the main component (73 %) of the PMcoarse fraction (PM10-PM2.5), though NO3- was also found to make a relatively large contribution to the measured mass (17 %) providing evidence of considerable processing of sea salt in the coarse mode. There was on occasions evidence of aerosol from combustion events being transported to the site in 2012 as high K+ concentrations (deviating from the known ratio in sea salt) coincided with increases in black carbon at the site. Pollution events in PM10 (defined as concentrations > 12 μg m-3) were on average dominated by NH4+ and NO3-, where smaller loadings at the site tended to be dominated by sea salt. As with other western European sites, the charge balance of the inorganic components resolved were biased towards cations, suggesting the aerosol was basic or more likely that organic acids contributed to the charge balance. This study demonstrates the UK

  5. Effects of Coarse Particulate Matter on Emergency Hospital Admissions for Respiratory Diseases: A Time-Series Analysis in Hong Kong

    PubMed Central

    Qiu, Hong; Tian, Linwei; Wang, Xiaorong; Tse, Lap Ah; Tam, Wilson; Wong, Tze Wai

    2012-01-01

    Background: Many epidemiological studies have linked daily counts of hospital admissions to particulate matter (PM) with an aerodynamic diameter ≤ 10 μm (PM10) and ≤ 2.5 μm (PM2.5), but relatively few have investigated the relationship of hospital admissions with coarse PM (PMc; 2.5–10 μm aerodynamic diameter). Objectives: We conducted this study to estimate the health effects of PMc on emergency hospital admissions for respiratory diseases in Hong Kong after controlling for PM2.5 and gaseous pollutants. Methods: We conducted a time-series analysis of associations between daily emergency hospital admissions for respiratory diseases in Hong Kong from January 2000 to December 2005 and daily PM2.5 and PMc concentrations. We estimated PMc concentrations by subtracting PM2.5 from PM10 measurements. We used generalized additive models to examine the relationship between PMc (single- and multiday lagged exposures) and hospital admissions adjusted for time trends, weather conditions, influenza outbreaks, PM2.5, and gaseous pollutants (nitrogen dioxide, sulfur dioxide, and ozone). Results: A 10.9-μg/m3 (interquartile range) increase in the 4-day moving average concentration of PMc was associated with a 1.94% (95% confidence interval: 1.24%, 2.64%) increase in emergency hospital admissions for respiratory diseases that was attenuated but still significant after controlling for PM2.5. Adjusting for gaseous pollutants and altering models assumptions had little influence on PMc effect estimates. Conclusion: PMc was associated with emergency hospital admissions for respiratory diseases in Hong Kong independent of PM2.5 and gaseous pollutants. Further research is needed to evaluate health effects of different components of PMc. PMID:22266709

  6. The fine and coarse particulate matter at four major Mediterranean cities: local and regional sources

    NASA Astrophysics Data System (ADS)

    Dimitriou, Konstantinos; Kassomenos, Pavlos

    2013-11-01

    Particulate air pollution is associated with adverse health effects to the population exposed. The aim of this paper is the identification of local and regional sources, affecting PM10 and PM2.5 levels in four large cities of southern Europe, namely: Lisbon, Madrid, Marseille, and Rome. Air pollution data from seven sampling sites of the European Union network were used. These stations were selected due to their ability of monitoring PM2.5 concentrations and providing reliable series of data. Each station's background was also taken into account. Pearson correlation coefficients and primal component analysis components were extracted separately for cold and warm periods in order to define the relationships among particle matters (PMs) and gaseous pollutants (CO, NO2, SO2, and O3) and evaluate the contributions of local sources. Possible seasonal variations of PM2.5/PM10 ratio daily values were also used as markers of PM sources, influencing particulate size distribution. Particle emissions were primarily attributed to traffic and secondarily to natural sources. Minimum daily values of PM2.5/PM10 ratio were observed during warm periods, particularly at suburban stations with rural background, due to dust resuspension and also due to the increase of biogenic coarse PM (pollen, dust, etc.). Hybrid Single-Particle Lagrangian Integrated Trajectory Model trajectory model was used in order to compute the 4-day backward trajectories of the air masses that affected the four cities which are under study during days with recorded PM10 exceedances, within a 5-year period (2003-2007), at 300, 750, and 1,500 m above ground level (AGL). The trajectories were then divided to clusters with a K-means analysis. In all four cities, the influence of slow-moving air masses was associated with a large fraction of PM10 exceedances and with high average and maximum daily mean PM10 concentrations, principally at the 300 m AGL analysis. As far the issue of the increased PM10 concentrations

  7. 40 CFR Appendix O to Part 50 - Reference Method for the Determination of Coarse Particulate Matter as PM10-2.5 in the Atmosphere

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... ambient temperature and pressure and the sampling time. The mass concentrations of both PM10c and PM2.5 in... 25 hours), and the start times of the PM2.5 and PM10c samples are within 10 minutes and the stop times of the samples are also within 10 minutes (see section 10.4 of this appendix). 4.0Accuracy (bias...

  8. 40 CFR Appendix O to Part 50 - Reference Method for the Determination of Coarse Particulate Matter as PM10-2.5 in the Atmosphere

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... ambient temperature and pressure and the sampling time. The mass concentrations of both PM10c and PM2.5 in... 25 hours), and the start times of the PM2.5 and PM10c samples are within 10 minutes and the stop times of the samples are also within 10 minutes (see section 10.4 of this appendix). 4.0Accuracy (bias...

  9. 40 CFR Appendix O to Part 50 - Reference Method for the Determination of Coarse Particulate Matter as PM10-2.5 in the Atmosphere

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... ambient temperature and pressure and the sampling time. The mass concentrations of both PM10c and PM2.5 in... 25 hours), and the start times of the PM2.5 and PM10c samples are within 10 minutes and the stop times of the samples are also within 10 minutes (see section 10.4 of this appendix). 4.0Accuracy (bias...

  10. 40 CFR Appendix O to Part 50 - Reference Method for the Determination of Coarse Particulate Matter as PM10-2.5 in the Atmosphere

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... ambient temperature and pressure and the sampling time. The mass concentrations of both PM10c and PM2.5 in... 25 hours), and the start times of the PM2.5 and PM10c samples are within 10 minutes and the stop times of the samples are also within 10 minutes (see section 10.4 of this appendix). 4.0Accuracy (bias...

  11. Relationship between physico-chemical characteristics and potential toxicity of PM10.

    PubMed

    Megido, Laura; Suárez-Peña, Beatriz; Negral, Luis; Castrillón, Leonor; Suárez, Susana; Fernández-Nava, Yolanda; Marañón, Elena

    2016-11-01

    PM10 was sampled at a suburban location affected by traffic and industry in the north of Spain. The samples were analysed to determine the chemical components of PM10 (organic and elemental carbon, soluble chemical species and metals). The aim of this study was to assess the toxicity of PM10 in terms of the bulk analysis and the physico-chemical properties of the particles. Total carbon, sulphates, ammonium, chlorides and nitrates were found to be the major constituents of PM10. The contribution of the last of these was found to increase significantly with PM10 concentration (Pearson coefficient correlation of 0.7, p-value < 0.001). Individual airborne particles were characterised morphologically and chemically via a combination of Scanning Electron Microscopy and Energy-Dispersive X-ray spectroscopy (SEM-EDX). The subsequent image analysis revealed C-rich particles with shapes that pointed to combustion processes. Moreover, carbonaceous particles seemed to act as vehicles for sulphur compounds and metals (S, Na, Fe, Ca, Mg, K, Al, Mn, Zn and Cu). Coarse particles were found to be mainly constituted by crustal material and marine and carbonaceous particles. Although most of the studied individual particles in PM10 samples (86.0%) had a diameter within the 0.1-2.5 μm range, 1.8% of them had sizes lower than 0.1 μm 40.2% of the total studied particles were estimated to be inhaled and deposited in the human respiratory tract; 12.3% of these particles would reach the deepest zones, thereby posing a major risk to human health. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Bioassay of naturally occurring allelochemicals for phytotoxicity.

    PubMed

    Leather, G R; Einhellig, F A

    1988-10-01

    The bioassay has been one of the most widely used tests to demonstrate allelopathic activity. Often, claims that a particular plant species inhibits the growth of another are based entirely on the seed germination response to solvent extracts of the suspected allelopathic plant; few of these tests are of value in demonstrating allelopathy under natural conditions. The veracity of the bioassay for evaluating naturally occurring compounds for phytotoxicity depends upon the physiological and biochemical response capacity of the bioassay organism and the mechanism(s) of action of the allelochemicals. The possibility that more than one allelochemical, acting in concert at very low concentrations, may be responsible for an observed allelopathic effect makes it imperative that bioassays be extremely sensitive to chemical growth perturbation agents. Among the many measures of phytotoxicity of allelochemicals, the inhibition (or stimulation) of seed germination, radicle elongation, and/or seedling growth have been the parameters of choice for most investigations. Few of these assays have been selected with the view towards the possible mechanism of the allelopathic effect.

  13. Seasonal variability of PM2.5 composition and sources in the Klang Valley urban-industrial environment

    NASA Astrophysics Data System (ADS)

    Amil, Norhaniza; Talib Latif, Mohd; Firoz Khan, Md; Mohamad, Maznorizan

    2016-04-01

    This study investigates the fine particulate matter (PM2.5) variability in the Klang Valley urban-industrial environment. In total, 94 daily PM2.5 samples were collected during a 1-year campaign from August 2011 to July 2012. This is the first paper on PM2.5 mass, chemical composition and sources in the tropical environment of Southeast Asia, covering all four seasons (distinguished by the wind flow patterns) including haze events. The samples were analysed for various inorganic components and black carbon (BC). The chemical compositions were statistically analysed and the temporal aerosol pattern (seasonal) was characterised using descriptive analysis, correlation matrices, enrichment factor (EF), stoichiometric analysis and chemical mass closure (CMC). For source apportionment purposes, a combination of positive matrix factorisation (PMF) and multi-linear regression (MLR) was employed. Further, meteorological-gaseous parameters were incorporated into each analysis for improved assessment. In addition, secondary data of total suspended particulate (TSP) and coarse particulate matter (PM10) sampled at the same location and time with this study (collected by Malaysian Meteorological Department) were used for PM ratio assessment. The results showed that PM2.5 mass averaged at 28 ± 18 µg m-3, 2.8-fold higher than the World Health Organisation (WHO) annual guideline. On a daily basis, the PM2.5 mass ranged between 6 and 118 µg m-3 with the daily WHO guideline exceeded 43 % of the time. The north-east (NE) monsoon was the only season with less than 50 % sample exceedance of the daily WHO guideline. On an annual scale, PM2.5 mass correlated positively with temperature (T) and wind speed (WS) but negatively with relative humidity (RH). With the exception of NOx, the gases analysed (CO, NO2, NO and SO2) were found to significantly influence the PM2.5 mass. Seasonal variability unexpectedly showed that rainfall, WS and wind direction (WD) did not significantly correlate

  14. Indicators reflecting local and transboundary sources of PM2.5 and PMCOARSE in Rome - Impacts in air quality

    NASA Astrophysics Data System (ADS)

    Dimitriou, Konstantinos; Kassomenos, Pavlos

    2014-10-01

    The keystone of this paper was to calculate and interpret indicators reflecting sources and air quality impacts of PM2.5 and PMCOARSE (PM10-PM2.5) in Rome (Italy), focusing on potential exogenous influences. A backward atmospheric trajectory cluster analysis was implemented. The likelihood of daily PM10 exceedances was studied in conjunction with atmospheric patterns, whereas a Potential Source Contribution Function (PSCF) based on air mass residence time was deployed on a grid of a 0.5° × 0.5° resolution. Higher PM2.5 concentrations were associated with short/medium range airflows originated from Balkan Peninsula, whereas potential PMCOARSE sources were localized across the Mediterranean and coastal North Africa, due to dust and sea spray transportation. According to the outcome of a daily Pollution Index (PI), a slightly increased degradation of air quality is induced due to the additional quantity of exogenous PM but nevertheless, average levels of PI in all trajectory clusters belong in the low pollution category. Gaseous and particulate pollutants were also elaborated by a Principal Component Analysis (PCA), which produced 4 components: [Traffic], [photochemical], [residential] and [Secondary Coarse Aerosol], reflecting local sources of air pollution. PM2.5 levels were strongly associated with traffic, whereas PMCOARSE were produced autonomously by secondary sources.

  15. Peculiar Traits of Coarse AP (Briefing Charts)

    DTIC Science & Technology

    2014-12-01

    coarse AP Bircumshaw, Newman Active centers are sources of AP decomposition gases AP low temperature decomposition (LTD) Most unstable AP particles ...delay before coarse AP ejection *Coarse AP particle flame retardancy 19 Air Force Research Laboratory Distribution A: Approved for public release...distribution unlimited. PA clearance #. Combustion bomb trials 2 AP phase change may enable coarse particle breakage Fractured coarse AP ejection agrees

  16. High-Resolution Coarse-Grained Modeling Using Oriented Coarse-Grained Sites.

    PubMed

    Haxton, Thomas K

    2015-03-10

    We introduce a method to bring nearly atomistic resolution to coarse-grained models, and we apply the method to proteins. Using a small number of coarse-grained sites (about one per eight atoms) but assigning an independent three-dimensional orientation to each site, we preferentially integrate out stiff degrees of freedom (bond lengths and angles, as well as dihedral angles in rings) that are accurately approximated by their average values, while retaining soft degrees of freedom (unconstrained dihedral angles) mostly responsible for conformational variability. We demonstrate that our scheme retains nearly atomistic resolution by mapping all experimental protein configurations in the Protein Data Bank onto coarse-grained configurations and then analytically backmapping those configurations back to all-atom configurations. This roundtrip mapping throws away all information associated with the eliminated (stiff) degrees of freedom except for their average values, which we use to construct optimal backmapping functions. Despite the 4:1 reduction in the number of degrees of freedom, we find that heavy atoms move only 0.051 Å on average during the roundtrip mapping, while hydrogens move 0.179 Å on average, an unprecedented combination of efficiency and accuracy among coarse-grained protein models. We discuss the advantages of such a high-resolution model for parametrizing effective interactions and accurately calculating observables through direct or multiscale simulations.

  17. Primary and Aggregate Size Distributions of PM in Tail Pipe Emissions form Diesel Engines

    NASA Astrophysics Data System (ADS)

    Arai, Masataka; Amagai, Kenji; Nakaji, Takayuki; Hayashi, Shinji

    Particulate matter (PM) emission exhausted from diesel engine should be reduced to keep the clean air environment. PM emission was considered that it consisted of coarse and aggregate particles, and nuclei-mode particles of which diameter was less than 50nm. However the detail characteristics about these particles of the PM were still unknown and they were needed for more physically accurate measurement and more effective reduction of exhaust PM emission. In this study, the size distributions of solid particles in PM emission were reported. PMs in the tail-pipe emission were sampled from three type diesel engines. Sampled PM was chemically treated to separate the solid carbon fraction from other fractions such as soluble organic fraction (SOF). The electron microscopic and optical-manual size measurement procedures were used to determine the size distribution of primary particles those were formed through coagulation process from nuclei-mode particles and consisted in aggregate particles. The centrifugal sedimentation method was applied to measure the Stokes diameter of dry-soot. Aerodynamic diameters of nano and aggregate particles were measured with scanning mobility particle sizer (SMPS). The peak aggregate diameters detected by SMPS were fallen in the same size regime as the Stokes diameter of dry-soot. Both of primary and Stokes diameters of dry-soot decreased with increases of engine speed and excess air ratio. Also, the effects of fuel properties and engine types on primary and aggregate particle diameters were discussed.

  18. Coarse and fine aerosol source apportionment in Rio de Janeiro, Brazil

    NASA Astrophysics Data System (ADS)

    Godoy, Maria Luiza D. P.; Godoy, José Marcus; Roldão, Luiz Alfredo; Soluri, Daniela S.; Donagemma, Raquel A.

    The metropolitan area of Rio de Janeiro is one of the twenty biggest urban agglomerations in the world, with 11 million inhabitants in the metropolitan area, and has a high population density, with 1700 hab. km -2. For this aerosol source apportionment study, the atmospheric aerosol sampling was performed at ten sites distributed in different locations of the metropolitan area from September/2003 to December/2005, with sampling during 24 h on a weekly basis. Stacked filter units (SFU) were used to collect fine and coarse aerosol particles with a flow rate of 17 L min -1. In both size fractions trace elements were analyzed by Inductively Coupled Plasma-Mass Spectrometry (ICP-MS) as well as water-soluble species by Ion-Chromatography (IC). Also gravimetric analysis and reflectance measurements provided aerosol mass and black carbon concentrations. Very good detection limits for up to 42 species were obtained. Mean annual PM 10 mass concentration ranged from 20 to 37 μg m -3, values that are within the Brazilian air quality standards. Receptor models such as principal factor analysis, cluster analysis and absolute principal factor analysis were applied in order to identify and quantify the aerosol sources. For fine and coarse modes, circa of 100% of the measured mass was quantitatively apportioned to relatively few identified aerosol sources. A very similar and consistent source apportionment was obtained for both fine and coarse modes for all 10 sampling sites. Soil dust is an important component, accounting for 22-72% and for 25-48% of the coarse and fine mass respectively. On the other hand, anthropogenic sources as vehicle traffic and oil combustion represent a relatively high contribution (52-75%) of the fine aerosol mass. The joint use of ICP-MS and IC analysis of species in aerosols has proven to be reliable and feasible for the analysis of large amount of samples, and the coupling with receptor models provided an excellent method for quantitative aerosol

  19. Short-Term Effect of Coarse Particles on Daily Mortality Rate in A Tropical City, Kaohsiung, Taiwan.

    PubMed

    Tsai, Shang-Shyue; Weng, Yi-Hao; Chiu, Ya-Wen; Yang, Chun-Yuh

    2015-01-01

    Many studies examined the short-term effects of air pollution on frequency of daily mortality over the past two decades. However, information on the relationship between exposure to levels of coarse particles (PM(2.5-10)) and daily mortality rate is relatively sparse due to limited availability of monitoring data and findings are inconsistent. This study was undertaken to determine whether an association exists between PM(2.5-10) levels and rate of daily mortality in Kaohsiung, Taiwan, a large industrial city with a tropical climate. Daily mortality rate, air pollution parameters, and weather data for Kaohsiung were obtained for the period 2006-2008. The relative risk (RR) of daily mortality occurrence was estimated using a time-stratified case-crossover approach, controlling for (1) weather variables, (2) day of the week, (3) seasonality, and (4) long-term time trends. For the single-pollutant model without adjustment for other pollutants, PM(2.5-10) exposure levels showed significant correlation with total mortality rate both on warm and cool days, with an interquartile range increase associated with a 14% (95% CI = 5-23%) and 12% (95% CI = 5-20%) rise in number of total deaths, respectively. In two-pollutant models, PM(2.5-10) exerted significant influence on total mortality frequency after inclusion of sulfur dioxide (SO(2)) on warm days. On cool days, PM(2.5-10) induced significant elevation in total mortality rate when SO(2) or ozone (O(3)) was added in the regression model. There was no apparent indication of an association between PM(2.5-10) exposure and deaths attributed to respiratory and circulatory diseases. This study provided evidence of correlation between short-term exposure to PM(2.5-10) and increased risk of death for all causes.

  20. Do we really need in-situ bioassays?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Salazar, M.H.; Salazar, S.M.

    1995-12-31

    In-situ bioassays are needed to validate the results from laboratory testing and to understand biological interactions. Standard laboratory protocols provide reproducible test results, and the precision of those tests can be mathematically defined. Significant correlations between toxic substances and levels of response (bioaccumulation and bioeffects) have also been demonstrated with natural field populations and suggest that the laboratory results can accurately predict field responses. An equal number of studies have shown a lack of correlation between laboratory bioassay results and responses of natural field populations. The best way to validate laboratory results is with manipulative field testing; i.e., in-situ bioassaysmore » with caged organisms. Bioaccumulation in transplanted bivalves has probably been the most frequently used form of an in-situ bioassay. The authors have refined those methods to include synoptic measurements of bioaccumulation and growth. Growth provides an easily-measured bioeffects endpoint and a means of calibrating bioaccumulation. Emphasis has been on minimizing the size range of test animals, repetitive measurements of individuals and standardization of test protocols for a variety of applications. They are now attempting to standardize criteria for accepting and interpreting data in the same way that laboratory bioassays have been standardized. Others have developed methods for in-situ bioassays using eggs, larvae, unicellular organisms, crustaceans, benthic invertebrates, bivalves, and fish. In the final analysis, the in-situ approach could be considered as an exposure system where any clinical measurements are possible. The most powerful approach would be to use the same species in laboratory and field experiments with the same endpoints.« less

  1. Environmental Quality Research Fish and Aufwuchs Bioassay

    DTIC Science & Technology

    1981-01-01

    reproductive success at WSF of shale JP-8 concentrations of 0. 51 ± 0. 30 mg/V. Results of continuous-flow bioassays of the WSF of hydrocarbon fuels to...42 Reproduction .................... ....................... 42 SALINE WATER BIOASSAYS OF HYDROCARBON FUELS ...... . . 47...and development and reproductive ability. Studies on JP-4, JP-8, and shale JP-8 have been conducted in saline water from San Francisco Bay at the

  2. Size fractionation in mercury-bearing airborne particles (HgPM 10) at Almadén, Spain: Implications for inhalation hazards around old mines

    NASA Astrophysics Data System (ADS)

    Moreno, Teresa; Higueras, Pablo; Jones, Tim; McDonald, Iain; Gibbons, Wes

    Almadén has a >2000y mining history and an unprecedented legacy of mercury contamination. Resuspended airborne particles were extracted from mine waste (Las Cuevas), retort site soil (Almadenejos), and urban car park dust (Almadén), separated into fine (PM 10) and coarse (PM >10 μm ) fractions, analysed for mercury using ICP-MS, and individual HgPM characterised using SEM. Cold extractable mercury concentrations in PM 10 range from 100 to 150 μg g -1 (car parks), to nearly 6000 μg g -1 (mine waste), reaching a world record of 95,000 μg g -1 above the abandoned retort at Almadenejos where ultrafine HgPM have pervaded the brickwork and soil and entered the food chain: edible wild asparagus stem material from here contains 35-65 μg g -1 Hg, and pig hair from animals living, inhaling and ingesting HgPM 10 at the site yielded 8-10 μg g -1. The PM 10 fraction (dusts easily wind transported and deeply inhaled) contains much more mercury than the coarser fraction. The contribution of HgPM 10 to ecosystem contamination and potential human health effects around old mercury mines has been underestimated.

  3. Source and Health Implication of Diurnal Atmospheric PM Mass and Number Concentrations

    NASA Astrophysics Data System (ADS)

    Li, W.; Olvera, H. A.; Garcia, J. H.; Pingitore, N. E.

    2007-12-01

    Exposure to atmospheric PM has been known to be associated with adverse health effects, decreased heart-rate variability, and respiratory and cardiopulmonary related morbidity and mortality. New evidence suggests that physical characteristics (mass, size, number, surface area, and morphology) of particles are strongly associated with mortality and morbidity through acute exposure. In particular, as reported in the literature, fine or ultrafine particles are more toxic than coarse particles on an equivalent mass basis while particles of less than 30 nm or greater than 2.5 um in diameter deposit more effectively (approximately 80 percent) in lung versus approximately 18 percent for particles in the range of 100 nm and 1 um. In addition, positive association has been observed between day to day variation in PM2.5 and hospital admissions, mortality and particle surface area, or particle number concentration and oxidative stress-induced DNA damage. This presentation shows the results of a study characterizing the physical properties of PM in El Paso, Texas. Diurnal PM mass concentration peaks previously observed at several other cities along the U.S.-Mexico border and elsewhere in the world were observed in El Paso. The hourly PM particle count varied from less than 10,000 particles/cm3 to greater than 80,000 particles/cm3 during the diurnal PM mass peaks. The total number of PM particles peaked in the morning and in the evening while the mode of the particle size changed from 20 nm to 50 nm, indicating different PM sources may be responsible for the mass and number concentrations and agglomeration of particles in the atmosphere during the day may possibly plays a role. A multivariate regression analysis was performed to correlate the PM mass and number concentrations to environmental variables. Real- time wind statistics were used in conjunction with traffic data at a nearby highway for identifying sources of the PM mass and number concentration peaks. Evaluation of

  4. Differences in composition of above and below legal limit PM10 at two contrasting sites in the city of Oporto, Portugal.

    NASA Astrophysics Data System (ADS)

    Caseiro, Alexandre; Oliveira, César; Pio, Casimiro; Nunes, Teresa; Santos, Patrícia; Mao, Hongjun; Sokhi, Ranjeet; Luhanna, Lakhu

    2010-05-01

    Particulate matter, either with aerodynamical diameter below 10 μm (PM10) or the fine (aerodynamical diameter below 2.5 μm, PM2.5) or coarse (aerodynamical diameter between 2.5 and 10 μm, PM2.5-10) modes only, are presently regarded as one of the main threats to public health instigated by air pollution. The levels of ambient air particulates are regulated but the limits are frequently surpassed. It is therefore necessary to identify and quantify PM sources and their variability, as well as the biogenic processes that to some extent control their ambient load, in order to effectively regulate on the anthropogenic activities which originate PM. PM2.5-10 and PM2.5 were monitored in Oporto, NW Portugal, at two contrasting sites (directly impacted by traffic, roadside, and at the urban background) during two one-month campaigns (winter and summer). Sampling was conducted independently during daytime and night-time. Out of the 207 sampling periods analysed, 38 (18%) were above the European legal PM10 limit of 50 ?g m-3. PM2.5 concentrations above the limit of 25 ?g m-3 proposed by the EC occurred in 70 out of 202 sampling (35%). More exceedances occurred in winter than in summer and at roadside than at the urban background. Within the scope of this work, the relationship between PM concentrations, namely the occurrence of exceeding PM limit values, and meteorological variables or the sampling period (day/night, work day/weekend) and will be presented. Besides PM mass, the soluble ionic composition (Cl-, SO42-, NO3-, Na+, NH4+, K+, Ca2+ and Mg2+) as well as the elemental composition (Al, Si, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, Ga, As, Se, Br, Rb, Sr, Zr, Sn, Ba and Pb) were also determined. This allowed the application of multivariate analysis (principal component analysis with multi-linear regression analysis, PCA-MLRA, and positive matrix factorisation, PMF). Five main sources were identified in the fine and coarse modes (direct road traffic emissions

  5. RECOMMENDATIONS FOR UO3 PLANT BIOASSAY

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carbaugh, Eugene H.

    2010-07-12

    Alternative urine bioassay programs are described for application with decontamination and decommissioning activities at the Hanford UO3 Plant. The alternatives are based on quarterly or monthly urine bioassay for recycled uranium, assuming multiple acute inhalation intakes of recycled uranium occurring over a year. The inhalations are assumed to be 5µm AMAD particles of 80% absorption type F and 20% absorption type M. Screening levels, expressed as daily uranium mass excretion rates in urine, and the actions associated with these levels are provided for both quarterly and monthly sampling frequencies.

  6. Uncertainties in estimates of mortality attributable to ambient PM2.5 in Europe

    NASA Astrophysics Data System (ADS)

    Kushta, Jonilda; Pozzer, Andrea; Lelieveld, Jos

    2018-06-01

    The assessment of health impacts associated with airborne particulate matter smaller than 2.5 μm in diameter (PM2.5) relies on aerosol concentrations derived either from monitoring networks, satellite observations, numerical models, or a combination thereof. When global chemistry-transport models are used for estimating PM2.5, their relatively coarse resolution has been implied to lead to underestimation of health impacts in densely populated and industrialized areas. In this study the role of spatial resolution and of vertical layering of a regional air quality model, used to compute PM2.5 impacts on public health and mortality, is investigated. We utilize grid spacings of 100 km and 20 km to calculate annual mean PM2.5 concentrations over Europe, which are in turn applied to the estimation of premature mortality by cardiovascular and respiratory diseases. Using model results at a 100 km grid resolution yields about 535 000 annual premature deaths over the extended European domain (242 000 within the EU-28), while numbers approximately 2.4% higher are derived by using the 20 km resolution. Using the surface (i.e. lowest) layer of the model for PM2.5 yields about 0.6% higher mortality rates compared with PM2.5 averaged over the first 200 m above ground. Further, the calculation of relative risks (RR) from PM2.5, using 0.1 μg m‑3 size resolution bins compared to the commonly used 1 μg m‑3, is associated with ±0.8% uncertainty in estimated deaths. We conclude that model uncertainties contribute a small part of the overall uncertainty expressed by the 95% confidence intervals, which are of the order of ±30%, mostly related to the RR calculations based on epidemiological data.

  7. Chemical characterization and source apportionment of fine and coarse particulate matter in Lahore, Pakistan

    NASA Astrophysics Data System (ADS)

    Stone, Elizabeth; Schauer, James; Quraishi, Tauseef A.; Mahmood, Abid

    2010-03-01

    Lahore, Pakistan is an emerging megacity that is heavily polluted with high levels of particle air pollution. In this study, respirable particulate matter (PM 2.5 and PM 10) were collected every sixth day in Lahore from 12 January 2007 to 19 January 2008. Ambient aerosol was characterized using well-established chemical methods for mass, organic carbon (OC), elemental carbon (EC), ionic species (sulfate, nitrate, chloride, ammonium, sodium, calcium, and potassium), and organic species. The annual average concentration (±one standard deviation) of PM 2.5 was 194 ± 94 μg m -3 and PM 10 was 336 ± 135 μg m -3. Coarse aerosol (PM 10-2.5) was dominated by crustal sources like dust (74 ± 16%, annual average ± one standard deviation), whereas fine particles were dominated by carbonaceous aerosol (organic matter and elemental carbon, 61 ± 17%). Organic tracer species were used to identify sources of PM 2.5 OC and chemical mass balance (CMB) modeling was used to estimate relative source contributions. On an annual basis, non-catalyzed motor vehicles accounted for more than half of primary OC (53 ± 19%). Lesser sources included biomass burning (10 ± 5%) and the combined source of diesel engines and residual fuel oil combustion (6 ± 2%). Secondary organic aerosol (SOA) was an important contributor to ambient OC, particularly during the winter when secondary processing of aerosol species during fog episodes was expected. Coal combustion alone contributed a small percentage of organic aerosol (1.9 ± 0.3%), but showed strong linear correlation with unidentified sources of OC that contributed more significantly (27 ± 16%). Brick kilns, where coal and other low quality fuels are burned together, are suggested as the most probable origins of unapportioned OC. The chemical profiling of emissions from brick kilns and other sources unique to Lahore would contribute to a better understanding of OC sources in this megacity.

  8. How coarse is too coarse for salmon spawning substrates?

    NASA Astrophysics Data System (ADS)

    Wooster, J. K.; Riebe, C. S.; Ligon, F. K.; Overstreet, B. T.

    2009-12-01

    Populations of Pacific salmon species have declined sharply in many rivers of the western US. Reversing these declines is a top priority and expense of many river restoration projects. To help restore salmon populations, managers often inject gravel into rivers, to supplement spawning habitat that has been depleted by gravel mining and the effects of dams—which block sediment and thus impair habitat downstream by coarsening the bed where salmon historically spawned. However, there is little quantitative understanding nor a methodology for determining when a river bed has become too coarse for salmon spawning. Hence there is little scientific basis for selecting sites that would optimize the restoration benefits of gravel injection (e.g., sites where flow velocities are suitable but bed materials are too coarse for spawning). To develop a quantitative understanding of what makes river beds too coarse for salmon spawning, we studied redds and spawning use in a series of California and Washington rivers where salmon spawning ability appears to be affected by coarse bed material. Our working hypothesis is that for a given flow condition, there is a maximum “threshold” particle size that a salmon of a given size is able to excavate and/or move as she builds her redd. A second, related hypothesis is that spawning use should decrease and eventually become impossible with increasing percent coverage by immovable particles. To test these hypotheses, we quantified the sizes and spatial distributions of immovably coarse particles in a series of salmon redds in each river during the peak of spawning. We also quantified spawning use and how it relates to percent coverage by immovable particles. Results from our studies of fall-run chinook salmon (Oncorhynchus tshawytsha) in the Feather River suggest that immovable particle size varies as a function of flow velocity over the redd, implying that faster water helps fish move bigger particles. Our Feather River study also

  9. Mimicking coarse-grained simulations without coarse-graining: enhanced sampling by damping short-range interactions.

    PubMed

    Wei, Dongshan; Wang, Feng

    2010-08-28

    The damped-short-range-interaction (DSRI) method is proposed to mimic coarse-grained simulations by propagating an atomistic scale system on a smoothed potential energy surface. The DSRI method has the benefit of enhanced sampling provided by a typical coarse-grained simulation without the need to perform coarse-graining. Our method was used to simulate liquid water, alanine dipeptide folding, and the self-assembly of dimyristoylphosphatidylcholine lipid. In each case, our method appreciably accelerated the dynamics without significantly changing the free energy surface. Additional insights from DSRI simulations and the promise of coupling our DSRI method with Hamiltonian replica-exchange molecular dynamics are discussed.

  10. Mimicking coarse-grained simulations without coarse-graining: Enhanced sampling by damping short-range interactions

    NASA Astrophysics Data System (ADS)

    Wei, Dongshan; Wang, Feng

    2010-08-01

    The damped-short-range-interaction (DSRI) method is proposed to mimic coarse-grained simulations by propagating an atomistic scale system on a smoothed potential energy surface. The DSRI method has the benefit of enhanced sampling provided by a typical coarse-grained simulation without the need to perform coarse-graining. Our method was used to simulate liquid water, alanine dipeptide folding, and the self-assembly of dimyristoylphosphatidylcholine lipid. In each case, our method appreciably accelerated the dynamics without significantly changing the free energy surface. Additional insights from DSRI simulations and the promise of coupling our DSRI method with Hamiltonian replica-exchange molecular dynamics are discussed.

  11. Sensitivity of mouse bioassay in clinical wound botulism.

    PubMed

    Wheeler, Charlotte; Inami, Gregory; Mohle-Boetani, Janet; Vugia, Duc

    2009-06-15

    California has an ongoing epidemic of wound botulism (WB) among injection drug users (IDUs). We retrospectively studied a cohort of patients with WB and determined the sensitivity of the mouse bioassay-the gold standard laboratory test for confirmation of botulism-in verifying WB. We defined a clinical case of WB as an acute, bilateral, descending, flaccid paralysis starting with 1 cranial nerve palsies in an IDU with no other explainable diagnosis. We calculated the sensitivity of the mouse bioassay as the proportion of clinical WB cases that had positive serum toxin test results by mouse bioassay. We compared serum toxin-positive with serum toxin-negative patients. Of 73 patients with WB, 50 tested serum toxin positive, yielding a sensitivity of 68%. Serum toxin-positive patients did not differ significantly from serum toxin-negative patients with respect to demographic characteristics or injection drug use practices or in days from patient symptom onset to collection of specimens for testing. Patients did not differ significantly by clinical characteristics, except that serum toxin-positive patients were more likely than serum toxin-negative patients to have required mechanical ventilation during their hospital courses (74% vs. 43%; P = .01). In this study, the mouse bioassay failed to detect botulinum toxin in the serum samples of nearly one-third of IDUs with characteristic WB. Such patients should be considered to have probable WB. Physicians should be aware of the test's limitations and base their final diagnosis of suspected WB on clinical criteria when the mouse bioassay produces negative results.

  12. Genotoxicity biomarkers for airborne particulate matter (PM2.5) in an area under petrochemical influence.

    PubMed

    Lemos, Andréia Torres; Lemos, Clarice Torres de; Flores, Andressa Negreiros; Pantoja, Eduarda Ozório; Rocha, Jocelita Aparecida Vaz; Vargas, Vera Maria Ferrão

    2016-09-01

    The effects of fine inhalable particles (PM2.5) were evaluated in an area under the influence of a petrochemical industry, investigating the sensitivity of different genotoxicity biomarkers. Organic extracts were obtained from PM2.5 samples at two sites, positioned in the first and second preferential wind direction in the area. The extracts were evaluated with Salmonella/microsome assay, microsuspension method, strains TA98, YG1021 and YG1024. The mammalian metabolization fraction (S9) was used to evaluate metabolite mutagenicity. The Comet Assay (CA) and Micronuclei Test were used in a Chinese hamster lung cell line (V79). All extracts showed mutagenicity in Salmonella, and nitrogenated compounds were strongly present. Genotoxicity were found in CA in almost all extracts and the micronuclei induction at the Site in the first (Autumn 1, Winter 1), and in the second (Spring 2) wind direction. V79 showed cytotoxicity in all samples. The three biomarkers were concordant in characterization Site NO with worse quality, compatible with the greater pollutants dispersion in the first wind direction. All PM2.5 concentrations were lower than those recommended by air quality standards but genotoxic effects were detected in all samples, corroborating that these standards are inadequate as quality indicators. The Salmonella/microsome assay proved sensitive to PM2.5 mutagenicity, with an outstanding influence of nitroarenes and aromatic amines. Analyses using CA and the micronucleus test broadened the levels of response that involve different damage induction mechanisms. Results show that the complex PM2.5 composition can provoke various genotoxic effects and the use of different bioassays is essential to understand its effects. Copyright © 2016. Published by Elsevier Ltd.

  13. Carbon-14 Bioassay for Decommissioning of Hanford Reactors

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carbaugh, Eugene H.; Watson, David J.

    2012-05-01

    The old production reactors at the US Department of Energy Hanford Site used large graphite piles as the moderator. As part of long-term decommissioning plans, the potential need for 14C radiobioassay of workers was identified. Technical issues associated with 14C bioassay and worker monitoring were investigated, including anticipated graphite characterization, potential intake scenarios, and the bioassay capabilities that may be required to support the decommissioning of the graphite piles. A combination of urine and feces sampling would likely be required for the absorption type S 14C anticipated to be encountered. However the concentrations in the graphite piles appear to bemore » sufficiently low that dosimetrically significant intakes of 14C are not credible, thus rendering moot the need for such bioassay.« less

  14. Carbon-14 bioassay for decommissioning of Hanford reactors.

    PubMed

    Carbaugh, Eugene H; Watson, David J

    2012-05-01

    The production reactors at the U.S. Department of Energy Hanford Site used large graphite piles as the moderator. As part of long-term decommissioning plans, the potential need for ¹⁴C radiobioassay of workers was identified. Technical issues associated with ¹⁴C bioassay and worker monitoring were investigated, including anticipated graphite characterization, potential intake scenarios, and the bioassay capabilities that may be required to support the decommissioning of the graphite piles. A combination of urine and feces sampling would likely be required for the absorption type S ¹⁴C anticipated to be encountered. However, the concentrations in the graphite piles appear to be sufficiently low that dosimetrically significant intakes of ¹⁴C are not credible, thus rendering moot the need for such bioassay.

  15. Coarse graining for synchronization in directed networks

    NASA Astrophysics Data System (ADS)

    Zeng, An; Lü, Linyuan

    2011-05-01

    Coarse-graining model is a promising way to analyze and visualize large-scale networks. The coarse-grained networks are required to preserve statistical properties as well as the dynamic behaviors of the initial networks. Some methods have been proposed and found effective in undirected networks, while the study on coarse-graining directed networks lacks of consideration. In this paper we proposed a path-based coarse-graining (PCG) method to coarse grain the directed networks. Performing the linear stability analysis of synchronization and numerical simulation of the Kuramoto model on four kinds of directed networks, including tree networks and variants of Barabási-Albert networks, Watts-Strogatz networks, and Erdös-Rényi networks, we find our method can effectively preserve the network synchronizability.

  16. Cerium Levels in Fine and Coarse Airborne Particulate Matter in El Paso, Texas—A Geospatial and Temporal Investigation

    NASA Astrophysics Data System (ADS)

    Amaya, M. A.; Ziwu, E.; Clague, J. W.; Pingitore, N. E., Jr.

    2016-12-01

    Known for use as mischmetal in metallurgical processing and as an industrial polishing vehicle, cerium dioxide (CeO2) or ceria is increasingly important in the global nanotechnology sector as a catalyst and diesel fuel additive. Investigations of the release, fate, and environmental and human health effects of CeO2 nanoparticles released into the air are particularly evident in Europe, where nano-ceria is used as a mileage extender and soot particle emission inhibitor in diesel fuel. Here we present an extensive (>2500 samples) data set of Ce analyses in air samples collected over 1-week continuous periods at 8 sites in El Paso, TX, USA at various times during the years 2006-2009. Nano-ceria was not approved for on-road vehicle use during this time frame, so these data establish a local baseline for potential diesel-associated emissions should approval be granted for nano-ceria use in the future. Dichotomous collectors provided simultaneous separate samples of the PMfine (<2.5 µm) and PMcoarse(2.5 - 10 µm) fractions. For all sites, more Ce was measured (by XRF) in the PMcoarse than in the PMfine, with typical Ce concentrations of 2 ng m-3 for the coarse and 1 ng m-3 for the fine. Following the general observation that coarse PM is of geologic origin and fine is anthropogenic, it appears that the majority of atmospheric Ce in El Paso is of natural origin. Further supporting this view, there was no consistent trend for higher airborne Ce values at sampling stations in the urban core, where vehicular or industrial releases would be greater relative to more rural sites. No seasonal trend was obvious in the multi-year data set, as might be expected for anthropogenic releases trapped by winter inversions. Note, however, that the dry desert and windy conditions in El Paso produce unusually high levels of ambient coarse PM. Although we have not yet identified the compounds of airborne Ce, our findings indirectly suggest that anthropogenic nano-ceria is not the dominant

  17. Spatial variation of PM elemental composition between and within 20 European study areas--Results of the ESCAPE project.

    PubMed

    Tsai, Ming-Yi; Hoek, Gerard; Eeftens, Marloes; de Hoogh, Kees; Beelen, Rob; Beregszászi, Timea; Cesaroni, Giulia; Cirach, Marta; Cyrys, Josef; De Nazelle, Audrey; de Vocht, Frank; Ducret-Stich, Regina; Eriksen, Kirsten; Galassi, Claudia; Gražuleviciene, Regina; Gražulevicius, Tomas; Grivas, Georgios; Gryparis, Alexandros; Heinrich, Joachim; Hoffmann, Barbara; Iakovides, Minas; Keuken, Menno; Krämer, Ursula; Künzli, Nino; Lanki, Timo; Madsen, Christian; Meliefste, Kees; Merritt, Anne-Sophie; Mölter, Anna; Mosler, Gioia; Nieuwenhuijsen, Mark J; Pershagen, Göran; Phuleria, Harish; Quass, Ulrich; Ranzi, Andrea; Schaffner, Emmanuel; Sokhi, Ranjeet; Stempfelet, Morgane; Stephanou, Euripides; Sugiri, Dorothea; Taimisto, Pekka; Tewis, Marjan; Udvardy, Orsolya; Wang, Meng; Brunekreef, Bert

    2015-11-01

    An increasing number of epidemiological studies suggest that adverse health effects of air pollution may be related to particulate matter (PM) composition, particularly trace metals. However, we lack comprehensive data on the spatial distribution of these elements. We measured PM2.5 and PM10 in twenty study areas across Europe in three seasonal two-week periods over a year using Harvard impactors and standardized protocols. In each area, we selected street (ST), urban (UB) and regional background (RB) sites (totaling 20) to characterize local spatial variability. Elemental composition was determined by energy-dispersive X-ray fluorescence analysis of all PM2.5 and PM10 filters. We selected a priori eight (Cu, Fe, K, Ni, S, Si, V, Zn) well-detected elements of health interest, which also roughly represented different sources including traffic, industry, ports, and wood burning. PM elemental composition varied greatly across Europe, indicating different regional influences. Average street to urban background ratios ranged from 0.90 (V) to 1.60 (Cu) for PM2.5 and from 0.93 (V) to 2.28 (Cu) for PM10. Our selected PM elements were variably correlated with the main pollutants (PM2.5, PM10, PM2.5 absorbance, NO2 and NOx) across Europe: in general, Cu and Fe in all size fractions were highly correlated (Pearson correlations above 0.75); Si and Zn in the coarse fractions were modestly correlated (between 0.5 and 0.75); and the remaining elements in the various size fractions had lower correlations (around 0.5 or below). This variability in correlation demonstrated the distinctly different spatial distributions of most of the elements. Variability of PM10_Cu and Fe was mostly due to within-study area differences (67% and 64% of overall variance, respectively) versus between-study area and exceeded that of most other traffic-related pollutants, including NO2 and soot, signaling the importance of non-tailpipe (e.g., brake wear) emissions in PM. Copyright © 2015 Elsevier Ltd

  18. Nanomaterial-Based Electrochemical Biosensors and Bioassays

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liu, Guodong; Mao, Xun; Gurung, Anant

    2010-08-31

    This book chapter summarizes the recent advance in nanomaterials for electrochemical biosensors and bioassays. Biofunctionalization of nanomaterials for biosensors fabrication and their biomedical applications are discussed.

  19. An episode of extremely high PM concentrations over Central Europe caused by dust emitted over the southern Ukraine

    NASA Astrophysics Data System (ADS)

    Birmili, W.; Schepanski, K.; Ansmann, A.; Spindler, G.; Tegen, I.; Wehner, B.; Nowak, A.; Reimer, E.; Mattis, I.; Müller, K.; Brüggemann, E.; Gnauk, T.; Herrmann, H.; Wiedensohler, A.; Althausen, D.; Schladitz, A.; Tuch, T.; Löschau, G.

    2007-08-01

    On 24 March 2007, the atmosphere over Central Europe was affected by an episode of exceptionally high mass concentrations of aerosol particles, most likely caused by a dust storm in the Southern Ukraine on the preceding day. At ground-based measurement stations in Slovakia, the Czech Republic, Poland and Germany PM10 mass concentrations rose to values between 200 and 1400 μg m-3. An evaluation of PM10 measurements from 360 monitoring stations showed that the dust cloud advanced along a narrow corridor at speeds of up to 70 km h-1. According to lidar observations over Leipzig, Germany, the high aerosol concentrations were confined to a homogeneous boundary layer of 1800 m height. The wavelength dependence of light extinction using both lidar and sun photometer measurements suggested the dominance of coarse particles during the main event. At a wavelength of 532 nm, relatively high volume extinction coefficients (300-400 Mm-1) and a particle optical depth of 0.65 was observed. In-situ measurements with an aerodynamic particle sizer at Melpitz, Germany, confirmed the presence of a coarse particle mode with a mode diameter >2 μm, whose maximum concentration coincided with that of PM10. A chemical particle analysis confirmed the dominance of non-volatile and insoluble matter in the coarse mode as well as high enrichments of Ti and Fe, which are characteristic of soil dust. A combination of back trajectory calculations and satellite images allowed to identify the dust source with confidence: On 23 March 2007, large amounts of dust were emitted from dried-out farmlands in the southern Ukraine, facilitated by wind gusts up to 100 km h-1. The unusual vertical stability and confined height of this dust layer as well as the rapid transport under dry conditions led to the conservation of high aerosol mass concentrations along the transect and thus to the extraordinary high aerosol concentrations over Central Europe. Our observations demonstrate the capacity of a combined

  20. PM RESEARCH

    EPA Science Inventory

    Activity Area (F03): PM Implementation NRMRL conducts research to improve the techniques used to quantify PM and PM precursor emissions from stationary, mobile, and fugitive sources and investigates the performance and cost of innovative control technology systems. The emission...

  1. 40 CFR Appendix O to Part 50 - Reference Method for the Determination of Coarse Particulate Matter as PM10-2.5 in the Atmosphere

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ....5 sample collection filter is weighed (after moisture and temperature conditioning) before and after... ambient temperature and pressure and the sampling time. The mass concentrations of both PM10c and PM2.5 in... in micrograms per cubic meter (µg/m3)at local temperature and pressure conditions. The mass...

  2. Size-fractionated PM10 monitoring in relation to the contribution of endotoxins in different polluted areas

    NASA Astrophysics Data System (ADS)

    Traversi, D.; Alessandria, L.; Schilirò, T.; Gilli, G.

    2011-07-01

    Particulate pollution is an environmental concern that is widespread and difficult to resolve. Recently various regulatory improvements around the world have been agreed upon to tackle this problem, especially as related to the fine fraction of particulates, which more closely correlates to human health effects than other fractions. The size-fractionation of inhalable particles and their organic composition represent a new area of research that has been poorly explored thus far. Endotoxins are a type of natural organic compound that can be found in particulate matter. They are correlated with Gram-negative bacterial contamination. Health outcomes associated with exposure to these toxins are not specific and often overlap with the health effects of PM (Particulate Matter) exposure, including asthma, bronchitis, acute respiratory distress syndrome and organic dust toxic syndrome. Very little information is available on the endotoxin distribution in different PM10 size fractions. This study examined PM10 size fractions and their endotoxin content. Sampling was conducted at five different locations: one urban, two rural and two rural sites that were highly influenced by large-scale farm animal production facilities. For each location, six different PM10 fractions were evaluated. PM10 sub-fractions were categorised as follows: PM 10-7.2 (1.15-31.30 μg m -3); PM 7.2-3.0 (1.86-30.73 μg m -3); PM 3.0-1.5 (1.74-13.90 μg m -3); PM 1.5-0.95 (0.24-10.57 μg m -3); PM 0.95-0.49 (1.22-14.33 μg m -3) and PM <0.49 (13.15-85.49 μg m -3). The ranges of endotoxin levels determined were: PM 10-7.2 (0.051-5.401 endotoxin units (EU) m -3); PM 7.2-3.0 (0.123-7.801 EU m -3); PM 3.0-1.5 (0.057-1.635 EU m -3); PM 1.5-0.95 (0.040-2.477 EU m -3); PM 0.95-0.49 (0.007-3.159 EU m -3) and PM <0.49 (0.039-3.975 EU m -3). Our results indicated consistency of the PM1 fraction at all of the sites and the predominant presence of endotoxins in the coarse fraction. The observed abatement of the PM

  3. PREDICTING POPULATION EXPOSURES TO PM10 AND PM 2.5

    EPA Science Inventory

    An improved model for human exposure to particulate matter (PM), specifically PM10 and PM2.5 is under development by the U.S. EPA/NERL. This model will incorporate data from new PM exposure measurement and exposure factors research. It is intended to be used to predict exposure...

  4. Structuring a risk-based bioassay program for uranium usage in university laboratories

    NASA Astrophysics Data System (ADS)

    Dawson, Johnne Talia

    Bioassay programs are integral in a radiation safety program. They are used as a method of determining whether individuals working with radioactive material have been exposed and have received a resulting dose. For radionuclides that are not found in nature, determining an exposure is straightforward. However, for a naturally occurring radionuclide like uranium, it is not as straightforward to determine whether a dose is the result of an occupational exposure. The purpose of this project is to address this issue within the University of Nevada, Las Vegas's (UNLV) bioassay program. This project consisted of two components that studied the effectiveness of a bioassay program in determining the dose for an acute inhalation of uranium. The first component of the plan addresses the creation of excretion curves, utilizing MATLAB that would allow UNLV to be able to determine at what time an inhalation dose can be attributed to. The excretion curves were based on the ICRP 30 lung model, as well as the Annual Limit Intake (ALI) values located in the Nuclear Regulatory Commission's 10CFR20 which is based on ICRP 30 (International Commission on Radiological Protection). The excretion curves would allow UNLV to be able to conduct in-house investigations of inhalation doses without solely depending on outside investigations and sources. The second component of the project focused on the creation of a risk based bioassay program to be utilized by UNLV that would take into account bioassay frequency that depended on the individual. Determining the risk based bioassay program required the use of baseline variance in order to minimize the investigation of false positives among those individuals who undergo bioassays for uranium work. The proposed program was compared against an evaluation limit of 10 mrem per quarter, an investigational limit of 125 mrem per quarter, and the federal/state requirement of 1.25 rem per quarter. It was determined that a bioassay program whose bioassay

  5. Genotoxicity of leachates from a landfill using three bioassays.

    PubMed

    Cabrera, G L; Rodriguez, D M

    1999-05-19

    In the city of Queretaro, around 500 tons of solid wastes are produced everyday and are deposited in a landfill. This is the result of social and economic activities of human beings or from their normal physiological functions. As a result of rain, leachates are produced, which, if not handled and treated correctly, may pollute the underground water. Among the bioassays developed for the detection of mutagenicity in environmental pollutants, plant systems have been proven to be sensitive, cheap, and effective. The purpose of this study was to determine the presence of genotoxic agents in the leachates of the landfill of the city using three bioassays: Tradescantia-micronucleus (Trad-MCN), Tradescantia stamen hair mutations (Trad-SHM) and Allium root anaphase aberrations (AL-RAA) and make a comparison of the results in the three assays. Leachates were sampled during both the dry and rainy seasons. Plant cuttings of Tradescantia or the roots of Allium were treated by submerging them in the leachates. Three replicates of each sample were analyzed in each of the three bioassays. As expected the samples of leachates collected during the dry season showed a higher genotoxicity than those collected during the rainy season. In conclusion, there are substances present in the leachates capable of inducing genotoxicity in the plant assays. On the other hand, the plant assays showed different degrees of sensitivity: the more sensitive was the Trad-MCN bioassay and the less sensitive the Trad-SHM assay. Therefore, when analyzing environmental pollutants it is recommended to use a battery of bioassays. Copyright 1999 Elsevier Science B.V.

  6. Validation of a Novel Bioassay for Low-level Perchlorate Determination

    DTIC Science & Technology

    2014-04-01

    was not attractive, since these reduce PMS2 , and it was thought they would interfere with the stoichiometry of NADH and perchlorate in the bioassay...these reduce PMS2 directly, and would interfere with the stoichiometry of NADH and perchlorate in the bioassay. Thus the only approach that could be

  7. Validation of a Novel Bioassay for Low-level Perchlorate Determination

    DTIC Science & Technology

    2013-05-01

    since these reduce PMS2 , and it was thought they would interfere with the stoichiometry of NADH and perchlorate in the bioassay. With regard to the...reduce PMS2 directly, and would interfere with the stoichiometry of NADH and perchlorate in the bioassay. Thus the only approach that could be

  8. The effect of pesticide residue on caged mosquito bioassays.

    PubMed

    Barber, J A S; Greer, Mike; Coughlin, Jamie

    2006-09-01

    Wind tunnel experiments showed that secondary pickup of insecticide residue by mosquitoes in cage bioassays had a significant effect on mortality. Cage bioassays using adult Ochlerotatus taeniorhynchus (Wiedemann) investigated the effect of exposure time to a contaminated surface. Cages were dosed in a wind tunnel using the LC50 for naled (0.124 mg a.i./ml) and an LC25 (0.0772 mg a.i./ml) for naled. Half of the bioassay mosquitoes were moved directly into clean cages with the other half remaining in the sprayed, hence contaminated, cage. Treatment mortality was assessed at 8, 15, 30, 60, 120, 240, and 1,440 min postapplication. Cage contamination had a significant effect on mosquito mortality for both the LC25 and LC50 between 15 and 30 min postapplication.

  9. Coarse-graining and self-dissimilarity of complex networks

    NASA Astrophysics Data System (ADS)

    Itzkovitz, Shalev; Levitt, Reuven; Kashtan, Nadav; Milo, Ron; Itzkovitz, Michael; Alon, Uri

    2005-01-01

    Can complex engineered and biological networks be coarse-grained into smaller and more understandable versions in which each node represents an entire pattern in the original network? To address this, we define coarse-graining units as connectivity patterns which can serve as the nodes of a coarse-grained network and present algorithms to detect them. We use this approach to systematically reverse-engineer electronic circuits, forming understandable high-level maps from incomprehensible transistor wiring: first, a coarse-grained version in which each node is a gate made of several transistors is established. Then the coarse-grained network is itself coarse-grained, resulting in a high-level blueprint in which each node is a circuit module made of many gates. We apply our approach also to a mammalian protein signal-transduction network, to find a simplified coarse-grained network with three main signaling channels that resemble multi-layered perceptrons made of cross-interacting MAP-kinase cascades. We find that both biological and electronic networks are “self-dissimilar,” with different network motifs at each level. The present approach may be used to simplify a variety of directed and nondirected, natural and designed networks.

  10. Long term PM2.5 estimation and its impact on human health in Beijing, China

    NASA Astrophysics Data System (ADS)

    Zheng, Sheng; Pozzer, Andrea; Cao, Chunxiang

    2014-05-01

    Due to the economic growth and urbanization, the emissions of pollutants have increased significantly in the North China Plain (NCP). Beijing, the capital of China, is located at the northern tip of NCP, and it is considered one of the most densely populated cities with the poorest air quality. This is of major concerns, because of the impact of high pollutants concentration on human health. The present study analyses the characteristics of AOD and the particulate matter with diameter < 2.5 μm (PM2.5) and its impact on human health in the central Beijing areas. We acquire AOD from Aerosol Robotic Network (AERONET) in Beijing from 2001 to 2012. The AOD data are fitted with a lognormal distribution, and the 95% of the cumulative probability is used as the threshold for episodes of high AOD. Most episodes occur in summer, mostly in June, though this is combined with high precipitation. Episodes of high AOD caused by coarse pollutants occur only in March and April, and they are mostly caused by dust from the north. According to wind direction, wind speed, boundary layer height (BLH) and pollutant emission distribution, episodes of high AOD are due to the anthropogenic pollutants from the south (Hebei province). Based on ground PM2.5 observation from the US embassy in Beijing from 2010 to 2011, we establish a relationship between PM2.5and AERONET AOD, including BLH and relative humidity (RH) correction. Thanks to this method, 12 years of PM2.5 are estimated for the Beijing central area, allowing the estimation of long term concentrations of this pollutant. Since there is no obvious difference among the daily PM2.5 of six stations lying in Chaoyang, Dongcheng, and Xicheng district, we use the daily PM2.5 from US embassy station to represent the PM2.5 concentration in these three districts, and calculate yearly premature mortality due to long term exposure to PM2.5among the population with an age of ≥ 30 yr in these three districts.

  11. Bioassay vs. Air Sampling: Practical Guidance and Experience at Hanford

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carbaugh, Eugene H.; Carlson, Eric W.; Hill, Robin L.

    2004-02-08

    The Hanford Site has implemented a policy to guide in determining whether air sampling data or special fecal bioassay data are more appropriate for determining doses of record for low-level plutonium exposures. The basis for the policy and four years of experience in comparing DAC-hours exposure with bioassay-based dosimetry is discussed.

  12. Bioassaying for ozone with pollen systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Feder, W.A.

    Sensitivity to ozone of pollen germinating in vitro is closely correlated with ozone sensitivity of the pollen parent. Ozone-sensitive and tolerant pollen populations have been identified in tobacco, petunia, and tomato cultivars. The rate of tube elongation can be reversibly slowed or stopped by exposure to low concentrations of ozone. The performance of selected pollen populations can then be used to bioassay ozone in ambient air by introducing the air sample into a growth chamber where ozone-sensitive pollen in growing. Year-round pollen producion can be achieved in the greenhouse. Harvested pollen can be tested, packaged, and transported to user facilitiesmore » without loss of vigor. Pollen populations are inexpensive to produce, respond reliably, and are simple to use as a bioassay for air quality.« less

  13. Soil bioassays as tools for sludge compost quality assessment

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Domene, Xavier, E-mail: x.domene@creaf.uab.es; Sola, Laura; Ramirez, Wilson

    2011-03-15

    Composting is a waste management technology that is becoming more widespread as a response to the increasing production of sewage sludge and the pressure for its reuse in soil. In this study, different bioassays (plant germination, earthworm survival, biomass and reproduction, and collembolan survival and reproduction) were assessed for their usefulness in the compost quality assessment. Compost samples, from two different composting plants, were taken along the composting process, which were characterized and submitted to bioassays (plant germination and collembolan and earthworm performance). Results from our study indicate that the noxious effects of some of the compost samples observed inmore » bioassays are related to the low organic matter stability of composts and the enhanced release of decomposition endproducts, with the exception of earthworms, which are favored. Plant germination and collembolan reproduction inhibition was generally associated with uncomposted sludge, while earthworm total biomass and reproduction were enhanced by these materials. On the other hand, earthworm and collembolan survival were unaffected by the degree of composting of the wastes. However, this pattern was clear in one of the composting procedures assessed, but less in the other, where the release of decomposition endproducts was lower due to its higher stability, indicating the sensitivity and usefulness of bioassays for the quality assessment of composts.« less

  14. Biomonitoring of cyanotoxins in two tropical reservoirs by cladoceran toxicity bioassays.

    PubMed

    da S Ferrão-Filho, Aloysio; Soares, Maria Carolina S; de Freitas Magalhães, Valeria; Azevedo, Sandra M F O

    2009-02-01

    This study evaluates the potential for the use of cladocerans in biomonitoring of cyanobacterial toxins. Two zooplankton species (Daphnia gessneri and Moina micrura) were cultivated in the laboratory for use in acute (48 h) and chronic (10 days) bioassays. Water samples were collected from two reservoirs and diluted in mineral water at four concentrations. Survivorship in the acute bioassays was used to calculate LC50, and survivorship and fecundity in chronic bioassays were used to calculate the intrinsic population growth rate (r) and the EC50. Analysis of phytoplankton in the water samples from one reservoir revealed that cyanobacteria were the dominant group, represented by the genera Anabaena, Cylindrospermopsis, and Microcystis. Results of bioassays showed adverse effects including death, paralysis, and reduced population growth rate, generally proportional to the reservoir water concentration. These effects may be related to the presence of cyanobacteria toxins (microcystins or saxitoxins) in the water.

  15. The limits of two-year bioassay exposure regimens for identifying chemical carcinogens.

    PubMed

    Huff, James; Jacobson, Michael F; Davis, Devra Lee

    2008-11-01

    Chemical carcinogenesis bioassays in animals have long been recognized and accepted as valid predictors of potential cancer hazards to humans. Most rodent bioassays begin several weeks after birth and expose animals to chemicals or other substances, including workplace and environmental pollutants, for 2 years. New findings indicate the need to extend the timing and duration of exposures used in the rodent bioassay. In this Commentary, we propose that the sensitivity of chemical carcinogenesis bio-assays would be enhanced by exposing rodents beginning in utero and continuing for 30 months (130 weeks) or until their natural deaths at up to about 3 years. Studies of three chemicals of different structures and uses-aspartame, cadmium, and toluene-suggest that exposing experimental animals in utero and continuing exposure for 30 months or until their natural deaths increase the sensitivity of bioassays, avoid false-negative results, and strengthen the value and validity of results for regulatory agencies. Government agencies, drug companies, and the chemical industry should conduct and compare the results of 2-year bioassays of known carcinogens or chemicals for which there is equivocal evidence of carcinogenicity with longer-term studies, with and without in utero exposure. If studies longer than 2 years and/or with in utero exposure are found to better identify potential human carcinogens, then regulatory agencies should promptly revise their testing guidelines, which were established in the 1960s and early 1970s. Changing the timing and dosing of the animal bioassay would enhance protection of workers and consumers who are exposed to potentially dangerous workplace or home contaminants, pollutants, drugs, food additives, and other chemicals throughout their lives.

  16. The Limits of Two-Year Bioassay Exposure Regimens for Identifying Chemical Carcinogens

    PubMed Central

    Huff, James; Jacobson, Michael F.; Davis, Devra Lee

    2008-01-01

    Background Chemical carcinogenesis bioassays in animals have long been recognized and accepted as valid predictors of potential cancer hazards to humans. Most rodent bioassays begin several weeks after birth and expose animals to chemicals or other substances, including workplace and environmental pollutants, for 2 years. New findings indicate the need to extend the timing and duration of exposures used in the rodent bioassay. Objectives In this Commentary, we propose that the sensitivity of chemical carcinogenesis bio-assays would be enhanced by exposing rodents beginning in utero and continuing for 30 months (130 weeks) or until their natural deaths at up to about 3 years. Discussion Studies of three chemicals of different structures and uses—aspartame, cadmium, and toluene—suggest that exposing experimental animals in utero and continuing exposure for 30 months or until their natural deaths increase the sensitivity of bioassays, avoid false-negative results, and strengthen the value and validity of results for regulatory agencies. Conclusions Government agencies, drug companies, and the chemical industry should conduct and compare the results of 2-year bioassays of known carcinogens or chemicals for which there is equivocal evidence of carcinogenicity with longer-term studies, with and without in utero exposure. If studies longer than 2 years and/or with in utero exposure are found to better identify potential human carcinogens, then regulatory agencies should promptly revise their testing guidelines, which were established in the 1960s and early 1970s. Changing the timing and dosing of the animal bioassay would enhance protection of workers and consumers who are exposed to potentially dangerous workplace or home contaminants, pollutants, drugs, food additives, and other chemicals throughout their lives. PMID:19057693

  17. [Intervention of coarse cereals on lipid metabolism in rats].

    PubMed

    Guo, Yanbo; Zhai, Chengkai; Wang, Yanli; Zhang, Qun; Ding, Zhoubo; Jin, Xin

    2010-03-01

    To observe the effect of coarse cereals on improving the disorder of lipid metabolism and the expression of PPARgamma mRNA in white adipose tissue in rats to investigate the mechanism of coarse cereals on lipid metabolism disorder. Forty four SPF rats were randomly divided into 4 groups: the negative control group was fed with normal diet and 3 experimental groups were fed with high-fat modeling diet for 6 weeks for model building. The 3 experimental groups, the coarse cereals group,rice-flour group and the hyperlipemia model group, were then fed with coarse cereals high-fat diet,rice-flour high-diet and high-fat modeling diet respectively for another 15 weeks. Compared with the hyperlipemia modeling group, serum TG, TC, IL-6 and TNF-alpha in the coarse cereals group were declined significantly (P < 0.05), serum HDL-C in coarse cereals group was higher than that in rice-flour group and hyperlipemia model group (P < 0.05), LPL, HL and TNF-alpha in coarse cereal group were close to the negative control group. Moreover, the expression of PPAR-gamma mRNA in white adipose tissue of the coarse cereals group was higher than other groups. The coarse cereals could activate PPARgamma and enhance the activity of key enzymes in lipids metabolism, so as to reduce the level of TG relieve inflammation and improve lipid dysmetabolism eventually.

  18. A magnetic nanobead-based bioassay provides sensitive detection of single- and biplex bacterial DNA using a portable AC susceptometer

    PubMed Central

    Strömberg, Mattias; Zardán Gómez de la Torre, Teresa; Nilsson, Mats; Svedlindh, Peter; Strømme, Maria

    2014-01-01

    Bioassays relying on magnetic read-out using probe-tagged magnetic nanobeads are potential platforms for low-cost biodiagnostic devices for pathogen detection. For optimal assay performance it is crucial to apply an easy, efficient and robust bead-probe conjugation protocol. In this paper, sensitive (1.5 pM) singleplex detection of bacterial DNA sequences is demonstrated in a portable AC susceptometer by a magnetic nanobead-based bioassay principle; the volume-amplified magnetic nanobead detection assay (VAM-NDA). Two bead sizes, 100 and 250 nm, are investigated along with a highly efficient, rapid, robust, and stable conjugation chemistry relying on the avidin–biotin interaction for bead-probe attachment. Avidin-biotin conjugation gives easy control of the number of detection probes per bead; thus allowing for systematic investigation of the impact of varying the detection probe surface coverage upon bead immobilization in rolling circle amplified DNA-coils. The existence of an optimal surface coverage is discussed. Biplex VAM-NDA detection is for the first time demonstrated in the susceptometer: Semi-quantitative results are obtained and it is concluded that the concentration of DNA-coils in the incubation volume is of crucial importance for target quantification. The present findings bring the development of commercial biodiagnostic devices relying on the VAM–NDA further towards implementation in point-of-care and outpatient settings. PMID:24174315

  19. 77 FR 60626 - Approval and Promulgation of Air Quality Implementation Plans; Virginia; The 2002 Base Year...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-04

    ... nitrogen oxides (NO X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH... X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH 3 ), and...

  20. 77 FR 61513 - Approval and Promulgation of Air Quality Implementation Plans; Maryland; The 2002 Base Year...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-10

    ... X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH 3 ), and... oxides (NO X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH 3...

  1. Why is particulate matter produced by wildfires toxic to lung macrophages?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Franzi, Lisa M.; Bratt, Jennifer M.; Williams, Keisha M.

    The mechanistic basis of the high toxicity to lung macrophages of coarse PM from the California wildfires of 2008 was examined in cell culture experiments with mouse macrophages. Wildfire PM directly killed macrophages very rapidly in cell culture at relatively low doses. The wildfire coarse PM is about four times more toxic to macrophages on an equal weight basis than the same sized PM collected from normal ambient air (no wildfires) from the same region and season. There was a good correlation between the extent of cytotoxicity and the amount of oxidative stress observed at a given dose of wildfiremore » PM in vitro. Our data implicate NF-{kappa}B signaling in the response of macrophages to wildfire PM, and suggest that most, if not all, of the cytotoxicity of wildfire PM to lung macrophages is the result of oxidative stress. The relative ratio of toxicity and of expression of biomarkers of oxidant stress between wildfire PM and 'normal' PM collected from ambient air is consistent with our previous results in mice in vivo, also suggesting that most, if not all, of the cytotoxicity of wildfire PM to lung macrophages is the result of oxidative stress. Our findings from this and earlier studies suggest that the active components of coarse PM from the wildfire are heat-labile organic compounds. While we cannot rule out a minor role for endotoxin in coarse PM preparations from the collected wildfire PM in our observed results both in vitro and in vivo, based on experiments using the inhibitor Polymyxin B most of the oxidant stress and pro-inflammatory activity observed was not due to endotoxin. -- Highlights: Black-Right-Pointing-Pointer Wildfire coarse PM kills macrophages at lower doses than coarse. Black-Right-Pointing-Pointer Wildfire coarse PM activates the NF-kB pathway at lower doses than ambient. Black-Right-Pointing-Pointer Wildfire coarse PM in vitro and in vivo kill macrophages by oxidative stress.« less

  2. Where is PM gone? Trends and variability of atmospheric PM10, PM2.5 and PM10-2.5 in the Po valley over the last decade (and more).

    NASA Astrophysics Data System (ADS)

    Bigi, Alessandro; Ghermandi, Grazia

    2017-04-01

    The Po Valley is one of the largest European regions with a remarkably high concentration level of atmospheric pollutants, both for particulate and gaseous compounds. In the last decade stringent regulations on air quality standards and on anthropogenic emissions have been set by the European Commission, leading to an overall improvement in air quality across Europe. In order to assess the decadal pattern and variability in PM across the Po valley we thoroughly investigated the time series of PM10, PM2.5 and PM10-2.5 from 41, 44 and 15 sites respectively (Bigi & Ghermandi 2014, 2016). PM2.5 and PM10-2.5 (PM10) series with a 7 (10) year or longer record have been analysed for long term trend in deseasonalized monthly means, annual quantiles and in monthly frequency distribution by robust statistical methods. A widespread and significant decreasing trend was observed at several sites for all size fractions, with the drop, up to a few percent per year, occurring mainly in winter for PM2.5 and throughout the year for PM10. All series were tested for a significant weekly periodicity (a proxy to estimate the impact of primary anthropogenic emissions) by 3 different statistical methods, yielding positive results for summer PM2.5 and PM10, and for both summer and winter PM10-2.5. Hierarchical cluster analysis showed larger variability for PM10 than for PM2.5. The former was split in five clusters: two encompassing the metropolitan areas of Turin and Milan and their respective nearby sites and the other three clusters gathering northeast, northwest and central Po Valley sites respectively. PM2.5 clusters divide the valley in western, eastern and southern/Apennines foothill sectors. The trend in atmospheric concentration was compared with the time series of local primary and precursor emissions, vehicular fleet details and fuel sales. A significant basin-wide drop in emissions occurred for gaseous pollutants, contrarily to primary emissions of PM10 and PM2.5, whose drop was

  3. Paper-based chromatic toxicity bioassay by analysis of bacterial ferricyanide reduction.

    PubMed

    Pujol-Vila, F; Vigués, N; Guerrero-Navarro, A; Jiménez, S; Gómez, D; Fernández, M; Bori, J; Vallès, B; Riva, M C; Muñoz-Berbel, X; Mas, J

    2016-03-03

    Water quality assessment requires a continuous and strict analysis of samples to guarantee compliance with established standards. Nowadays, the increasing number of pollutants and their synergistic effects lead to the development general toxicity bioassays capable to analyse water pollution as a whole. Current general toxicity methods, e.g. Microtox(®), rely on long operation protocols, the use of complex and expensive instrumentation and sample pre-treatment, which should be transported to the laboratory for analysis. These requirements delay sample analysis and hence, the response to avoid an environmental catastrophe. In an attempt to solve it, a fast (15 min) and low-cost toxicity bioassay based on the chromatic changes associated to bacterial ferricyanide reduction is here presented. E. coli cells (used as model bacteria) were stably trapped on low-cost paper matrices (cellulose-based paper discs, PDs) and remained viable for long times (1 month at -20 °C). Apart from bacterial carrier, paper matrices also acted as a fluidic element, allowing fluid management without the need of external pumps. Bioassay evaluation was performed using copper as model toxic agent. Chromatic changes associated to bacterial ferricyanide reduction were determined by three different transduction methods, i.e. (i) optical reflectometry (as reference method), (ii) image analysis and (iii) visual inspection. In all cases, bioassay results (in terms of half maximal effective concentrations, EC50) were in agreement with already reported data, confirming the good performance of the bioassay. The validation of the bioassay was performed by analysis of real samples from natural sources, which were analysed and compared with a reference method (i.e. Microtox). Obtained results showed agreement for about 70% of toxic samples and 80% of non-toxic samples, which may validate the use of this simple and quick protocol in the determination of general toxicity. The minimum instrumentation

  4. Saccharide Composition in Fine and Coarse Particulate Matter and Soils in Central Arizona and Use of Saccharides as Molecular Markers for Source Apportionment

    NASA Astrophysics Data System (ADS)

    Jia, Y.; Clements, A.; Fraser, M.

    2009-04-01

    The desert southwestern United States routinely exceeds health-based standards for coarse particulate matter [1]. PM10 concentrations are high in both urban and rural areas and are believed to originate from fugitive dust emissions from agricultural fields and roads and soil erosion from the surrounding desert locations. Soil together with its associated biota contains a complex mixture of biogenic detritus, including plant detritus, airborne microbes comprised of bacteria, viruses, spores of lichens and fungi, small algae, and protozoan cysts [4][5], which can mostly become airborne when winds are strong enough and soil dry enough to be re-entrained into the atmosphere [3]. Other potential sources to PM10 may include primary biological aerosol particles (PBAPs), given a multitude of flower, grass, and fungal species that thrive in the Sonoran desert and actively release pollens and spores throughout the year [2]. However, because soil and fugitive dust is also believed to contain a large number of these biological particles and is considered as a secondary host of PBAPs [3] [4], the role and contribution of PBAPs as a direct ambient PM source in the desert southwest have not been clearly stated or investigated. In an effort to identify and assess the relative contribution of these and other major PM sources in the southwestern US region, and particularly to assess the contribution from soil and fugitive dust, a series of ambient PM samples and soil samples were collected in Higley, AZ, USA, a suburb of the Phoenix metropolitan area which has seen rapid urban sprawl onto agricultural lands. Because of their suggested ability to track biologically important organic materials from natural environment [4][6][7][8][9][10], saccharides were chosen as the key compounds to trace the release of soil dusts into the atmosphere, and to elucidate other major sources that contribute to the PM levels in this location in the arid southwestern US. To this end, saccharide compounds

  5. 77 FR 73544 - Approval and Promulgation of Air Quality Implementation Plans; West Virginia; The 2002 Base Year...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-11

    ... nitrogen oxides (NO X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH... oxides (NO X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH 3...

  6. In Vitro Biologic Activities of the Antimicrobials Triclocarban, Its Analogs, and Triclosan in Bioassay Screens: Receptor-Based Bioassay Screens

    PubMed Central

    Ahn, Ki Chang; Zhao, Bin; Chen, Jiangang; Cherednichenko, Gennady; Sanmarti, Enio; Denison, Michael S.; Lasley, Bill; Pessah, Isaac N.; Kültz, Dietmar; Chang, Daniel P.Y.; Gee, Shirley J.; Hammock, Bruce D.

    2008-01-01

    Background Concerns have been raised about the biological and toxicologic effects of the antimicrobials triclocarban (TCC) and triclosan (TCS) in personal care products. Few studies have evaluated their biological activities in mammalian cells to assess their potential for adverse effects. Objectives In this study, we assessed the activity of TCC, its analogs, and TCS in in vitro nuclear-receptor–responsive and calcium signaling bioassays. Materials and methods We determined the biological activities of the compounds in in vitro, cell-based, and nuclear-receptor–responsive bioassays for receptors for aryl hydrocarbon (AhR), estrogen (ER), androgen (AR), and ryanodine (RyR1). Results Some carbanilide compounds, including TCC (1–10 μM), enhanced estradiol (E2)-dependent or testosterone-dependent activation of ER- and AR-responsive gene expression up to 2.5-fold but exhibited little or no agonistic activity alone. Some carbanilides and TCS exhibited weak agonistic and/or antagonistic activity in the AhR-responsive bioassay. TCS exhibited antagonistic activity in both ER- and AR-responsive bioassays. TCS (0.1–10 μM) significantly enhanced the binding of [3H]ryanodine to RyR1 and caused elevation of resting cytosolic [Ca2+] in primary skeletal myotubes, but carbanilides had no effect. Conclusions Carbanilides, including TCC, enhanced hormone-dependent induction of ER- and AR-dependent gene expression but had little agonist activity, suggesting a new mechanism of action of endocrine-disrupting compounds. TCS, structurally similar to noncoplanar ortho-substituted poly-chlorinated biphenyls, exhibited weak AhR activity but interacted with RyR1 and stimulated Ca2+ mobilization. These observations have potential implications for human and animal health. Further investigations are needed into the biological and toxicologic effects of TCC, its analogs, and TCS. PMID:18795164

  7. Highly Coarse-Grained Representations of Transmembrane Proteins

    PubMed Central

    2017-01-01

    Numerous biomolecules and biomolecular complexes, including transmembrane proteins (TMPs), are symmetric or at least have approximate symmetries. Highly coarse-grained models of such biomolecules, aiming at capturing the essential structural and dynamical properties on resolution levels coarser than the residue scale, must preserve the underlying symmetry. However, making these models obey the correct physics is in general not straightforward, especially at the highly coarse-grained resolution where multiple (∼3–30 in the current study) amino acid residues are represented by a single coarse-grained site. In this paper, we propose a simple and fast method of coarse-graining TMPs obeying this condition. The procedure involves partitioning transmembrane domains into contiguous segments of equal length along the primary sequence. For the coarsest (lowest-resolution) mappings, it turns out to be most important to satisfy the symmetry in a coarse-grained model. As the resolution is increased to capture more detail, however, it becomes gradually more important to match modular repeats in the secondary structure (such as helix-loop repeats) instead. A set of eight TMPs of various complexity, functionality, structural topology, and internal symmetry, representing different classes of TMPs (ion channels, transporters, receptors, adhesion, and invasion proteins), has been examined. The present approach can be generalized to other systems possessing exact or approximate symmetry, allowing for reliable and fast creation of multiscale, highly coarse-grained mappings of large biomolecular assemblies. PMID:28043122

  8. Screening of hormone-like activities in bottled waters available in Southern Spain using receptor-specific bioassays.

    PubMed

    Real, Macarena; Molina-Molina, José-Manuel; Jiménez-Díaz, Inmaculada; Arrebola, Juan Pedro; Sáenz, José-María; Fernández, Mariana F; Olea, Nicolás

    2015-01-01

    Bottled water consumption is a putative source of human exposure to endocrine-disrupting chemicals (EDCs). Research has been conducted on the presence of chemicals with estrogen-like activity in bottled waters and on their estrogenicity, but few data are available on the presence of hormonal activities associated with other nuclear receptors (NRs). The aim of this study was to determine the presence of endocrine activities dependent on the activation of human estrogen receptor alpha (hERa) and/or androgen receptor (hAR) in water in glass or plastic bottles sold to consumers in Southern Spain. Hormone-like activities were evaluated in 29 bottled waters using receptor-specific bioassays based on reporter gene expression in PALM cells [(anti-)androgenicity] and cell proliferation assessment in MCF-7 cells [(anti-)estrogenicity] after optimized solid phase extraction (SPE). All of the water samples analyzed showed hormonal activity. This was estrogenic in 79.3% and anti-estrogenic in 37.9% of samples and was androgenic in 27.5% and anti-androgenic in 41.3%, with mean concentrations per liter of 0.113pM 17β-estradiol (E2) equivalent units (E2Eq), 11.01pM anti-estrogen (ICI 182780) equivalent units (ICI 182780Eq), 0.33pM methyltrienolone (R1881) equivalent units (R1881Eq), and 0.18nM procymidone equivalent units (ProcEq). Bottled water consumption contributes to EDC exposure. Hormone-like activities observed in waters from both plastic and glass bottles suggest that plastic packaging is not the sole source of contamination and that the source of the water and bottling process may play a role, among other factors. Further research is warranted on the cumulative effects of long-term exposure to low doses of EDCs. Copyright © 2014 Elsevier Ltd. All rights reserved.

  9. Identifying PM2.5 and PM0.1 sources for epidemiological studies in California.

    PubMed

    Hu, Jianlin; Zhang, Hongliang; Chen, Shuhua; Ying, Qi; Wiedinmyer, Christine; Vandenberghe, Francois; Kleeman, Michael J

    2014-05-06

    The University of California-Davis_Primary (UCD_P) model was applied to simultaneously track ∼ 900 source contributions to primary particulate matter (PM) in California for seven continuous years (January 1st, 2000 to December 31st, 2006). Predicted source contributions to primary PM2.5 mass, PM1.8 elemental carbon (EC), PM1.8 organic carbon (OC), PM0.1 EC, and PM0.1 OC were in general agreement with the results from previous source apportionment studies using receptor-based techniques. All sources were further subjected to a constraint check based on model performance for PM trace elemental composition. A total of 151 PM2.5 sources and 71 PM0.1 sources contained PM elements that were predicted at concentrations in general agreement with measured values at nearby monitoring sites. Significant spatial heterogeneity was predicted among the 151 PM2.5 and 71 PM0.1 source concentrations, and significantly different seasonal profiles were predicted for PM2.5 and PM0.1 in central California vs southern California. Population-weighted concentrations of PM emitted from various sources calculated using the UCD_P model spatial information differed from the central monitor estimates by up to 77% for primary PM2.5 mass and 148% for PM2.5 EC because the central monitor concentration is not representative of exposure for nearby population. The results from the UCD_P model provide enhanced source apportionment information for epidemiological studies to examine the relationship between health effects and concentrations of primary PM from individual sources.

  10. Reconciling PM10 analyses by different sampling methods for Iron King Mine tailings dust.

    PubMed

    Li, Xu; Félix, Omar I; Gonzales, Patricia; Sáez, Avelino Eduardo; Ela, Wendell P

    2016-03-01

    The overall project objective at the Iron King Mine Superfund site is to determine the level and potential risk associated with heavy metal exposure of the proximate population emanating from the site's tailings pile. To provide sufficient size-fractioned dust for multi-discipline research studies, a dust generator was built and is now being used to generate size-fractioned dust samples for toxicity investigations using in vitro cell culture and animal exposure experiments as well as studies on geochemical characterization and bioassay solubilization with simulated lung and gastric fluid extractants. The objective of this study is to provide a robust method for source identification by comparing the tailing sample produced by dust generator and that collected by MOUDI sampler. As and Pb concentrations of the PM10 fraction in the MOUDI sample were much lower than in tailing samples produced by the dust generator, indicating a dilution of Iron King tailing dust by dust from other sources. For source apportionment purposes, single element concentration method was used based on the assumption that the PM10 fraction comes from a background source plus the Iron King tailing source. The method's conclusion that nearly all arsenic and lead in the PM10 dust fraction originated from the tailings substantiates our previous Pb and Sr isotope study conclusion. As and Pb showed a similar mass fraction from Iron King for all sites suggesting that As and Pb have the same major emission source. Further validation of this simple source apportionment method is needed based on other elements and sites.

  11. [Application of bioassay in quality control of Chinese materia medica-taking Radix Isatidis as an example].

    PubMed

    Yan, Dan; Ren, Yongshen; Luo, Jiaoyang; Li, Hanbing; Feng, Xue; Xiao, Xiaohe

    2010-10-01

    Bioassay, which construct the characteristics consistents with Chinese medical science, is the core mode and methods for the quality control of Chinese materia medica. Taking the bioassay of Radix Isatidis as an example, the contribution, status and application of bioassay in the quality control of Chinese materia medica were introduced in this article, and two key issue (the selection of reference and measurement methods) in the process of establishing bioassay were also explained. This article expects to provide a reference for the development and improvement of the bioassay of Chinese materia medica in a practical manipulation level.

  12. In vitro bioassays to evaluate complex chemical mixtures in recycled water

    PubMed Central

    Jia, Ai; Escher, Beate I.; Leusch, Frederic D.L.; Tang, Janet Y.M.; Prochazka, Erik; Dong, Bingfeng; Snyder, Erin M.; Snyder, Shane A.

    2016-01-01

    With burgeoning population and diminishing availability of freshwater resources, the world continues to expand the use of alternative water resources for drinking, and the quality of these sources has been a great concern for the public as well as public health professionals. In vitro bioassays are increasingly being used to enable rapid, relatively inexpensive toxicity screening that can be used in conjunction with analytical chemistry data to evaluate water quality and the effectiveness of water treatment. In this study, a comprehensive bioassay battery consisting of 36 bioassays covering 18 biological endpoints was applied to screen the bioactivity of waters of varying qualities with parallel treatments. Samples include wastewater effluent, ultraviolet light (UV) and/or ozone advanced oxidation processed (AOP) recycled water, and infiltrated recycled groundwater. Based on assay sensitivity and detection frequency in the samples, several endpoints were highlighted in the battery, including assays for genotoxicity, mutagenicity, estrogenic activity, glucocorticoid activity, aryl hydrocarbon receptor activity, oxidative stress response, and cytotoxicity. Attenuation of bioactivity was found to be dependent on the treatment process and bioassay endpoint. For instance, ozone technology significantly removed oxidative stress activity, while UV based technologies were most efficient for the attenuation of glucocorticoid activity. Chlorination partially attenuated genotoxicity and greatly decreased herbicidal activity, while groundwater infiltration efficiently attenuated most of the evaluated bioactivity with the exception of genotoxicity. In some cases, bioactivity (e.g., mutagenicity, genotoxicity, and arylhydrocarbon receptor) increased following water treatment, indicating that transformation products of water treatment may be a concern. Furthermore, several types of bioassays with the same endpoint were compared in this study, which could help guide the selection

  13. Assessment of annual air pollution levels with PM1, PM2.5, PM10 and associated heavy metals in Algiers, Algeria.

    PubMed

    Talbi, Abdelhamid; Kerchich, Yacine; Kerbachi, Rabah; Boughedaoui, Ménouèr

    2018-01-01

    Concentrations of particulate matter less than 1  μm, 2.5  μm, 10 μm and their contents of heavy metals were investigated in two different stations, urban and roadside at Algiers (Algeria). Sampling was conducted during two years by a high volume samplers (HVS) equipped with a cascade impactor at four levels stage, for one year sampling. The characterization of the heavy metals associated to the particulate matter (PM) was carried out by X-Ray Fluorescence analysis (XRF). The annual average concentration of PM 1 , PM 2.5 and PM 10 in both stations were 18.24, 32.23 and 60.01 μg m -3 respectively. The PM 1 , PM 2.5 and PM 10 concentrations in roadside varied from 13.46 to 25.59 μg m -3 , 20.82-49.85 μg m -3 and 45.90-77.23 μg m -3 respectively. However in the urban station, the PM 1 , PM 2.5 and PM 10 concentrations varied from 10.45 to 26.24 μg m -3 , 18.53-47.58 μg m -3 and 43.8-91.62 μg m -3 . The heavy metals associated to the PM were confirmed by Scanning Electron Microscopy-Energy Dispersive X-Ray analyses (SEM-EDX). The different spots of PM 2.5 analysis by SEM-EDX shows the presence of nineteen elements with anthropogenic and natural origins, within the heavy metal detected, the lead was found with maximum of 5% (weight percent). In order to determine the source contributions of PM levels at the two sampling sites sampling, principal compound analysis (PCA) was applied to the collected data. Statistical analysis confirmed anthropogenic source with traffic being a significant source and high contribution of natural emissions. At both sites, the PM 2.5 /PM 10 ratio is lower than that usually recorded in developed countries. The study of the back-trajectories of the air masses starting from Sahara shows that desert dust influences the concentration and the composition of the PM measured in Algiers. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. PM SUPERSITES PROGRAM

    EPA Science Inventory

    In 1997, the EPA administrator published National Ambient Air Quality Standards (NAAQS) for Particulate Matter (PM) that included new standards for PM2.5 (PM with diameters less than 2.5 um). These revised standards stimulated national concern over uncertainties regarding the ex...

  15. Bioassay of complex mixtures derived from fossil fuels.

    PubMed Central

    Bingham, E; Barkley, W

    1979-01-01

    The conversion or processing of shale, coal, or petroleum involves elevated temperatures and altered pressures, and under these conditions polynuclear aromatic hydrocarbons are likely to form. Certain compounds of this type exhibit carcinogenic activity for a variety of organ sites in experimental animals and epidemiological evidence strongly implicates their role as carcinogens in man. It is then not unexpected that many liquid fractions derived from shale and coal are carcinogenic when subjected to bioassay. Benzo(a)pyrene, [B(a)P], is frequently considered to be an indicator substance. It is clear that when a small quantity of B(a)P is present in a fraction, the fraction will exhibit carcinogenic activity in a bioassay (mouse skin). However, it does not follow that the lack of detectable B(a)P insures that the fraction will be noncarcinogenic. Several fractions have been analyzed for their content of B(a)P and then subjected to bioassay. A method for testing complex mixtures for their carcinogenic potential is described. The carcinogenic potency of these fractions are compared to petroleum fractions. Images FIGURE 1. FIGURE 2. FIGURE 3. FIGURE 4. FIGURE 5. FIGURE 6. FIGURE 7. FIGURE 8. FIGURE 9. PMID:446446

  16. Indoor/outdoor relationships and mass closure of quasi-ultrafine, accumulation and coarse particles in Barcelona schools

    NASA Astrophysics Data System (ADS)

    Viana, M.; Rivas, I.; Querol, X.; Alastuey, A.; Sunyer, J.; Álvarez-Pedrerol, M.; Bouso, L.; Sioutas, C.

    2014-05-01

    The mass concentration, chemical composition and sources of quasi-ultrafine (quasi-UFP, PM0.25), accumulation (PM0.25-2.5) and coarse mode (PM2.5-10) particles were determined in indoor and outdoor air at 39 schools in Barcelona (Spain). Quasi-UFP mass concentrations measured (25.6 μg m-3 outdoors, 23.4 μg m-3 indoors) are significantly higher than those reported in other studies, and characterised by higher carbonaceous and mineral matter contents and a lower proportion of secondary inorganic ions. Results suggest that quasi-UFPs in Barcelona are affected by local sources in the schools, mainly human activity (e.g. organic material from textiles, etc., contributing 23-46% to total quasi-UFP mass) and playgrounds (in the form of mineral matter, contributing about 9% to the quasi-UFP mass). The particle size distribution patterns of toxicologically relevant metals and major aerosol components was characterised, displaying two modes for most elements and components, and one mode for inorganic salts (ammonium nitrate and sulfate) and elemental carbon (EC). Regarding metals, Ni and Cr were partitioned mainly in quasi-UFPs and could thus be of interest for epidemiological studies, given their high redox properties. Exposure of children to quasi-UFP mass and chemical species was assessed by comparing the concentrations measured at urban background and traffic areas schools. Finally, three main indoor sources across all size fractions were identified by assessing indoor / outdoor ratios (I / O) of PM species used as their tracers: human activity (organic material), cleaning products, paints and plastics (Cl- source), and a metallic mixed source (comprising combinations of Cu, Zn, Co, Cd, Pb, As, V and Cr). Our results support the need to enforce targeted legislation to determine a minimum "safe" distance between major roads and newly built schools to reduce exposure to traffic-derived metals in quasi-UFPs.

  17. Evaluation of the mutagenicity and carcinogenicity of motor vehicle emissions in short-term bioassays.

    PubMed Central

    Lewtas, J

    1983-01-01

    Incomplete combustion of fuel in motor vehicles results in the emission of submicron carbonaceous particles which, after cooling and dilution, contain varying quantities of extractable organic constituents. These organics are mutagenic in bacteria. Confirmatory bioassays in mammalian cells provide the capability of detecting chromosomal and DNA damage in addition to gene mutations. In order to evaluate the mutagenicity of these organics in mammalian cells, extractable organics from particle emissions from several diesel and gasoline vehicles were compared in a battery of microbial, mammalian cell and in vivo bioassays. The mammalian cell mutagenicity bioassays were selected to detect gene mutations, DNA damage, and chromosomal effects. Carcinogenesis bioassays conducted included short-term assays for oncogenic transformation and skin tumorigenesis. The results in different assay systems are compared both qualitatively and quantitatively. Good quantitative correlations were observed between several mutagenesis and carcinogenesis bioassays for this series of diesel and gasoline emissions. PMID:6186475

  18. Quantum theory of multiscale coarse-graining.

    PubMed

    Han, Yining; Jin, Jaehyeok; Wagner, Jacob W; Voth, Gregory A

    2018-03-14

    Coarse-grained (CG) models serve as a powerful tool to simulate molecular systems at much longer temporal and spatial scales. Previously, CG models and methods have been built upon classical statistical mechanics. The present paper develops a theory and numerical methodology for coarse-graining in quantum statistical mechanics, by generalizing the multiscale coarse-graining (MS-CG) method to quantum Boltzmann statistics. A rigorous derivation of the sufficient thermodynamic consistency condition is first presented via imaginary time Feynman path integrals. It identifies the optimal choice of CG action functional and effective quantum CG (qCG) force field to generate a quantum MS-CG (qMS-CG) description of the equilibrium system that is consistent with the quantum fine-grained model projected onto the CG variables. A variational principle then provides a class of algorithms for optimally approximating the qMS-CG force fields. Specifically, a variational method based on force matching, which was also adopted in the classical MS-CG theory, is generalized to quantum Boltzmann statistics. The qMS-CG numerical algorithms and practical issues in implementing this variational minimization procedure are also discussed. Then, two numerical examples are presented to demonstrate the method. Finally, as an alternative strategy, a quasi-classical approximation for the thermal density matrix expressed in the CG variables is derived. This approach provides an interesting physical picture for coarse-graining in quantum Boltzmann statistical mechanics in which the consistency with the quantum particle delocalization is obviously manifest, and it opens up an avenue for using path integral centroid-based effective classical force fields in a coarse-graining methodology.

  19. Exploration of ToxCast/Tox21 bioassays as candidate bioanalytical tools for measuring groups of chemicals in water.

    PubMed

    Louisse, Jochem; Dingemans, Milou M L; Baken, Kirsten A; van Wezel, Annemarie P; Schriks, Merijn

    2018-06-14

    The present study explores the ToxCast/Tox21 database to select candidate bioassays as bioanalytical tools for measuring groups of chemicals in water. To this aim, the ToxCast/Tox21 database was explored for bioassays that detect polycyclic aromatic hydrocarbons (PAHs), aromatic amines (AAs), (chloro)phenols ((C)Ps) and halogenated aliphatic hydrocarbons (HAliHs), which are included in the European and/or Dutch Drinking Water Directives. Based on the analysis of the availability and performance of bioassays included in the database, we concluded that several bioassays are suitable as bioanalytical tools for assessing the presence of PAHs and (C)Ps in drinking water sources. No bioassays were identified for AAs and HAliHs, due to the limited activity of these chemicals and/or the limited amount of data on these chemicals in the database. A series of bioassays was selected that measure molecular or cellular effects that are covered by bioassays currently in use for chemical water quality monitoring. Interestingly, also bioassays were selected that represent molecular or cellular effects that are not covered by bioassays currently applied. The usefulness of these newly identified bioassays as bioanalytical tools should be further evaluated in follow-up studies. Altogether, this study shows how exploration of the ToxCast/Tox21 database provides a series of candidate bioassays as bioanalytical tools for measuring groups of chemicals in water. This assessment can be performed for any group of chemicals of interest (if represented in the database), and may provide candidate bioassays that can be used to complement the currently applied bioassays for chemical water quality assessment. Copyright © 2018. Published by Elsevier Ltd.

  20. Standardization of a fluconazole bioassay and correlation of results with those obtained by high-pressure liquid chromatography.

    PubMed Central

    Rex, J H; Hanson, L H; Amantea, M A; Stevens, D A; Bennett, J E

    1991-01-01

    An improved bioassay for fluconazole was developed. This assay is sensitive in the clinically relevant range (2 to 40 micrograms/ml) and analyzes plasma, serum, and cerebrospinal fluid specimens; bioassay results correlate with results obtained by high-pressure liquid chromatography (HPLC). Bioassay and HPLC analyses of spiked plasma, serum, and cerebrospinal fluid samples (run as unknowns) gave good agreement with expected values. Analysis of specimens from patients gave equivalent results by both HPLC and bioassay. HPLC had a lower within-run coefficient of variation (less than 2.5% for HPLC versus less than 11% for bioassay) and a lower between-run coefficient of variation (less than 5% versus less than 12% for bioassay) and was more sensitive (lower limit of detection, 0.1 micrograms/ml [versus 2 micrograms/ml for bioassay]). The bioassay is, however, sufficiently accurate and sensitive for clinical specimens, and its relative simplicity, low sample volume requirement, and low equipment cost should make it the technique of choice for analysis of routine clinical specimens. PMID:1854166

  1. Comparative cardiopulmonary effects of size-fractionated airborne particulate matter.

    PubMed

    Amatullah, Hajera; North, Michelle L; Akhtar, Umme S; Rastogi, Neeraj; Urch, Bruce; Silverman, Frances S; Chow, Chung-Wai; Evans, Greg J; Scott, Jeremy A

    2012-02-01

    Strong epidemiological evidence exists linking particulate matter (PM) exposures with hospital admissions of individuals for cardiopulmonary symptoms. The PM size is important in influencing the extent of infiltration into the respiratory tract and systemic circulation and directs the differential physiological impacts. To investigate the differential effects of the quasi-ultrafine (PM(0.2)), fine (PM(0.15-2.5)), and coarse PM (PM(2.5-10)) size fractions on pulmonary and cardiac function. Female BALB/c mice were exposed to HEPA-filtered laboratory air or concentrated coarse, fine, or quasi-ultrafine PM using Harvard Ambient Particle Concentrators in conjunction with our nose-only exposure system. These exposures were conducted as part of the "Health Effects of Aerosols in Toronto (HEAT)" campaign. Following a 4 h exposure, mice underwent assessment of respiratory function and recording of electrocardiograms using the flexiVent® system. Exposure to coarse and fine PM resulted in a significant reduction in quasistatic compliance of the lung. Baseline total respiratory resistance and maximum responsiveness to methacholine were augmented after coarse PM exposures but were not affected by quasi-ultrafine PM exposures. In contrast, quasi-ultrafine PM alone had a significant effect on heart rate and in reducing heart rate variability. These findings indicate that coarse and fine PM influence lung function and airways responsiveness, while ultrafine PM can perturb cardiac function. This study supports the hypothesis that coarse and fine PM exerts its predominant physiologic effects at the site of deposition in the airways, whereas ultrafine PM likely crosses the alveolar epithelial barrier into the systemic circulation to affect cardiovascular function.

  2. Sensitivity assessment of sea lice to chemotherapeutants: Current bioassays and best practices.

    PubMed

    Marín, S L; Mancilla, J; Hausdorf, M A; Bouchard, D; Tudor, M S; Kane, F

    2017-12-18

    Traditional bioassays are still necessary to test sensitivity of sea lice species to chemotherapeutants, but the methodology applied by the different scientists has varied over time in respect to that proposed in "Sea lice resistance to chemotherapeutants: A handbook in resistance management" (2006). These divergences motivated the organization of a workshop during the Sea Lice 2016 conference "Standardization of traditional bioassay process by sharing best practices." There was an agreement by the attendants to update the handbook. The objective of this article is to provide a baseline analysis of the methodology for traditional bioassays and to identify procedures that need to be addressed to standardize the protocol. The methodology was divided into the following steps: bioassay design; material and equipment; sea lice collection, transportation and laboratory reception; preparation of dilution; parasite exposure; response evaluation; data analysis; and reporting. Information from the presentations of the workshop, and also from other studies, allowed for the identification of procedures inside a given step that need to be standardized as they were reported to be performed differently by the different working groups. Bioassay design and response evaluation were the targeted steps where more procedures need to be analysed and agreed upon. © 2017 John Wiley & Sons Ltd.

  3. Computing the Free Energy Barriers for Less by Sampling with a Coarse Reference Potential while Retaining Accuracy of the Target Fine Model.

    PubMed

    Plotnikov, Nikolay V

    2014-08-12

    Proposed in this contribution is a protocol for calculating fine-physics (e.g., ab initio QM/MM) free-energy surfaces at a high level of accuracy locally (e.g., only at reactants and at the transition state for computing the activation barrier) from targeted fine-physics sampling and extensive exploratory coarse-physics sampling. The full free-energy surface is still computed but at a lower level of accuracy from coarse-physics sampling. The method is analytically derived in terms of the umbrella sampling and the free-energy perturbation methods which are combined with the thermodynamic cycle and the targeted sampling strategy of the paradynamics approach. The algorithm starts by computing low-accuracy fine-physics free-energy surfaces from the coarse-physics sampling in order to identify the reaction path and to select regions for targeted sampling. Thus, the algorithm does not rely on the coarse-physics minimum free-energy reaction path. Next, segments of high-accuracy free-energy surface are computed locally at selected regions from the targeted fine-physics sampling and are positioned relative to the coarse-physics free-energy shifts. The positioning is done by averaging the free-energy perturbations computed with multistep linear response approximation method. This method is analytically shown to provide results of the thermodynamic integration and the free-energy interpolation methods, while being extremely simple in implementation. Incorporating the metadynamics sampling to the algorithm is also briefly outlined. The application is demonstrated by calculating the B3LYP//6-31G*/MM free-energy barrier for an enzymatic reaction using a semiempirical PM6/MM reference potential. These modifications allow computing the activation free energies at a significantly reduced computational cost but at the same level of accuracy compared to computing full potential of mean force.

  4. Computing the Free Energy Barriers for Less by Sampling with a Coarse Reference Potential while Retaining Accuracy of the Target Fine Model

    PubMed Central

    2015-01-01

    Proposed in this contribution is a protocol for calculating fine-physics (e.g., ab initio QM/MM) free-energy surfaces at a high level of accuracy locally (e.g., only at reactants and at the transition state for computing the activation barrier) from targeted fine-physics sampling and extensive exploratory coarse-physics sampling. The full free-energy surface is still computed but at a lower level of accuracy from coarse-physics sampling. The method is analytically derived in terms of the umbrella sampling and the free-energy perturbation methods which are combined with the thermodynamic cycle and the targeted sampling strategy of the paradynamics approach. The algorithm starts by computing low-accuracy fine-physics free-energy surfaces from the coarse-physics sampling in order to identify the reaction path and to select regions for targeted sampling. Thus, the algorithm does not rely on the coarse-physics minimum free-energy reaction path. Next, segments of high-accuracy free-energy surface are computed locally at selected regions from the targeted fine-physics sampling and are positioned relative to the coarse-physics free-energy shifts. The positioning is done by averaging the free-energy perturbations computed with multistep linear response approximation method. This method is analytically shown to provide results of the thermodynamic integration and the free-energy interpolation methods, while being extremely simple in implementation. Incorporating the metadynamics sampling to the algorithm is also briefly outlined. The application is demonstrated by calculating the B3LYP//6-31G*/MM free-energy barrier for an enzymatic reaction using a semiempirical PM6/MM reference potential. These modifications allow computing the activation free energies at a significantly reduced computational cost but at the same level of accuracy compared to computing full potential of mean force. PMID:25136268

  5. Effect of fly ash on the strength of porous concrete using recycled coarse aggregate to replace low-quality natural coarse aggregate

    NASA Astrophysics Data System (ADS)

    Arifi, Eva; Cahya, Evi Nur; Christin Remayanti, N.

    2017-09-01

    The performance of porous concrete made of recycled coarse aggregate was investigated. Fly ash was used as cement partial replacement. In this study, the strength of recycled aggregate was coMPared to low quality natural coarse aggregate which has high water absorption. Compression strength and tensile splitting strength test were conducted to evaluate the performance of porous concrete using fly ash as cement replacement. Results have shown that the utilization of recycled coarse aggregate up to 75% to replace low quality natural coarse aggregate with high water absorption increases compressive strength and splitting tensile strength of porous concrete. Using fly ash up to 25% as cement replacement improves compressive strength and splitting tensile strength of porous concrete.

  6. Application of Bioassays for the Ecotoxicity Assessment of Contaminated Soils

    NASA Astrophysics Data System (ADS)

    Fernández, María D.; Babín, Mar; Tarazona, José V.

    The use of bioassays for soil characterization is receiving significant attention as a complementary tool to chemical analysis. Bioassays consist of direct toxicity assays of environmental samples that are transferred to the laboratory and analyzed for toxicity against selected organisms. Such soil samples contain the combination of the different pollutants present in situ and enable factors such as the bioavailability of contaminants or the interactions (synergic and antagonic) between them to be simultaneously studied.

  7. Establishment of a bioassay for the toxicity evaluation and quality control of Aconitum herbs.

    PubMed

    Qin, Yi; Wang, Jia-bo; Zhao, Yan-ling; Shan, Li-mei; Li, Bao-cai; Fang, Fang; Jin, Cheng; Xiao, Xiao-he

    2012-01-15

    Currently, no bioassay is available for evaluating the toxicity of Aconitum herbs, which are well known for their lethal cardiotoxicity and neurotoxicity. In this study, we established a bioassay to evaluate the toxicity of Aconitum herbs. Test sample and standard solutions were administered to rats by intravenous infusion to determine their minimum lethal doses (MLD). Toxic potency was calculated by comparing the MLD. The experimental conditions of the method were optimized and standardized to ensure the precision and reliability of the bioassay. The application of the standardized bioassay was then tested by analyzing 18 samples of Aconitum herbs. Additionally, three major toxic alkaloids (aconitine, mesaconitine, and hypaconitine) in Aconitum herbs were analyzed using a liquid chromatographic method, which is the current method of choice for evaluating the toxicity of Aconitum herbs. We found that for all Aconitum herbs, the total toxicity of the extract was greater than the toxicity of the three alkaloids. Therefore, these three alkaloids failed to account for the total toxicity of Aconitum herbs. Compared with individual chemical analysis methods, the chief advantage of the bioassay is that it characterizes the total toxicity of Aconitum herbs. An incorrect toxicity evaluation caused by quantitative analysis of the three alkaloids might be effectively avoided by performing this bioassay. This study revealed that the bioassay is a powerful method for the safety assessment of Aconitum herbs. Copyright © 2011 Elsevier B.V. All rights reserved.

  8. Modeling the spatio-temporal heterogeneity in the PM10-PM2.5 relationship

    NASA Astrophysics Data System (ADS)

    Chu, Hone-Jay; Huang, Bo; Lin, Chuan-Yao

    2015-02-01

    This paper explores the spatio-temporal patterns of particulate matter (PM) in Taiwan based on a series of methods. Using fuzzy c-means clustering first, the spatial heterogeneity (six clusters) in the PM data collected between 2005 and 2009 in Taiwan are identified and the industrial and urban areas of Taiwan (southwestern, west central, northwestern, and northern Taiwan) are found to have high PM concentrations. The PM10-PM2.5 relationship is then modeled with global ordinary least squares regression, geographically weighted regression (GWR), and geographically and temporally weighted regression (GTWR). The GTWR and GWR produce consistent results; however, GTWR provides more detailed information of spatio-temporal variations of the PM10-PM2.5 relationship. The results also show that GTWR provides a relatively high goodness of fit and sufficient space-time explanatory power. In particular, the PM2.5 or PM10 varies with time and space, depending on weather conditions and the spatial distribution of land use and emission patterns in local areas. Such information can be used to determine patterns of spatio-temporal heterogeneity in PM that will allow the control of pollutants and the reduction of public exposure.

  9. Diagnosis of Dust- and Pollution- Impacted PM10, PM2.5, and PM1 Aerosols Observed at Gosan Climate Observatory

    NASA Astrophysics Data System (ADS)

    Shang, X.; Lee, M.; LIM, S.; Gustafsson, O.; Lee, G.; Chang, L.

    2017-12-01

    In East Asia, dust is prevalent and used to be mixed with various pollutants during transportation, causing a large uncertainty in estimating the climate forcing of aerosol and difficulty in making environmental policy. In order to diagnose the influence of dust particles on aerosol, we conducted a long-term measurement of PM10, PM2.5 and PM1 for mass, water-soluble ions, and carbonaceous compounds at Gosan Climate Observatory, South Korea from August 2007 to February 2012. The result of principle component analysis reveals that anthropogenic, typical soil dust, and saline dust impact explain 46 %, 16 %, and 9 % of the total variance for all samples, respectively. The mode analysis of mass distributions provides the criteria to distinguish these principle factors. The anthropogenic impact was most pronounced in PM1 and diagnosed by the PM1 mass higher than mean+σ. If PM10 mass was greater than mean+σ, it was highly likely to be affected by typical soil dust. This criterion is also applicable for PM2.5 mass, which was enhanced by both haze and dust particles, though. In the present study, saline dust was recognized by relatively high concentrations of Na and Cl ions in PM1.0. However, their existence was not manifested by increased mass in any of three PM types.

  10. Spatiotemporal patterns of particulate matter (PM) and associations between PM and mortality in Shenzhen, China.

    PubMed

    Zhang, Fengying; Liu, Xiaojian; Zhou, Lei; Yu, Yong; Wang, Li; Lu, Jinmei; Wang, Wuyi; Krafft, Thomas

    2016-03-02

    Most studies on air pollution exposure and its associations with human health in China have focused on the heavily polluted industrial areas and/or mega-cities, and studies on cities with comparatively low air pollutant concentrations are still rare. Only a few studies have attempted to analyse particulate matter (PM) for the vibrant economic centre Shenzhen in the Pearl River Delta. So far no systematic investigation of PM spatiotemporal patterns in Shenzhen has been undertaken and the understanding of pollution exposure in urban agglomerations with comparatively low pollution is still limited. We analyze daily and hourly particulate matter concentrations and all-cause mortality during 2013 in Shenzhen, China. Temporal patterns of PM (PM2.5 and PM10) with aerodynamic diameters of 2.5 (10) μm or less (or less (including particles with a diameter that equals to 2.5 (10) μm) are studied, along with the ratio of PM2.5 to PM10. Spatial distributions of PM10 and PM2.5 are addressed and associations of PM10 or PM2.5 and all-cause mortality are analyzed. Annual average PM10 and PM2.5 concentrations were 61.3 and 39.6 μg/m(3) in 2013. PM2.5 failed to meet the Class 2 annual limit of the National Ambient Air Quality Standard. PM2.5 was the primary air pollutant, with 8.8 % of days having heavy PM2.5 pollution. The daily PM2.5/PM10 ratios were high. Hourly PM2.5 concentrations in the tourist area were lower than downtown throughout the day. PM10 and PM2.5 concentrations were higher in western parts of Shenzhen than in eastern parts. Excess risks in the number of all-cause mortality with a 10 μg/m(3) increase of PM were 0.61 % (95 % confidence interval [CI]: 0.50-0.72) for PM10, and 0.69 % (95 % CI: 0.55-0.83) for PM2.5, respectively. The greatest ERs of PM10 and PM2.5 were in 2-day cumulative measures for the all-cause mortality, 2-day lag for females and the young (0-65 years), and L02 for males and the elder (>65 years). PM2.5 had higher risks on all

  11. Setting a protective PM standard: A view from the frontline

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    John Paul; Eddie Terrill

    2006-06-15

    Several aspects of the US EPA's recent proposal to revise the particulate matter (PM) standards deeply concern state and local air agencies and their representatives with the State and Territorial Air Pollution Program Administrators and the Association of Local Air Pollution Control Offices (STAPPA and ALAPCO). STAPPA and ALAPCO urge EPA to follow the recommendations of its appointed scientific experts and lower the annual average standard to 13 or 14 {mu}mg/m{sup 3} in addition to lowering the daily standard to 35 {mu}m/m{sup 3}. Unless EPA strengthens its proposal consistent with the recommendations of the Clean Air Scientific Advisory Committee (CASAC),more » STAPPA and ALAPCO are extremely concerned that we will continue to see significant increased premature mortality and adverse health effects throughout the country. For the reasons described in the article STAPPA and ALAPCO urge EPA to eliminate the exemptions for agriculture, mining and rural windblown dust. STAPPA and ALAPCO are troubled that EPA has ignored any commitment to funding the proposed coarse PM network scheduled for deployment in Fiscal Year (FY) 2008. EPA has estimated that the capital costs of this monitoring network could easily exceed US$ 14 million, with annual operating expenses of approximately US$ 13 million. State and local agencies will simply not be able to assume these significant costs. 33 refs.« less

  12. Micro-organism distribution sampling for bioassays

    NASA Technical Reports Server (NTRS)

    Nelson, B. A.

    1975-01-01

    Purpose of sampling distribution is to characterize sample-to-sample variation so statistical tests may be applied, to estimate error due to sampling (confidence limits) and to evaluate observed differences between samples. Distribution could be used for bioassays taken in hospitals, breweries, food-processing plants, and pharmaceutical plants.

  13. Genotoxicity of soil from farmland irrigated with wastewater using three plant bioassays.

    PubMed

    Cabrera, G L; Rodriguez, D M

    1999-05-19

    Three well known plant bioassays, the Allium root chromosome aberration (AL-RAA) assay, the Tradescantia micronucleus (Trad-MCN) assay, and the Tradescantia stamen hair (Trad-SHM) mutation assay were validated in 1991 by the International Programme on Chemical Safety (IPCS) under the auspices of the World Health Organization, and the United Nations Environment Programme (UNEP). These plant bioassays have proven to be efficient tests for chemical screening and especially for in situ monitoring for genotoxicity of environmental pollutants. As a result of this validation study, standard protocols of these three plant bioassays were used by some of the 11 participating countries in the IPCS to carry on genotoxicity tests on air, water and soil as a follow up activity. In the city of Queretaro, Mexico, wastewater coming from both industrial and domestic sources and without any treatment is used to irrigate the farm crops, polluting the soil. Potentially the pollutants could reach the food chain. For the above reason, soil irrigated with wastewater was sampled and monitored for the presence of genotoxic agents using the above three bioassays. Extracts from soil samples were made using distilled water and organic solvents by shaking the sample for about 12 h under a relatively low temperature (15-20 degrees C). Plant cuttings of Tradescantia or the roots of Allium were treated by submerging them in the extracts. Three replicates of each sample were analyzed in each of the three bioassays. Extracts using DMSO, ethanol and distilled water tested positive in the three bioassays and there were no differences for the genotoxicity of the extracts with the different solvents. Copyright 1999 Elsevier Science B.V.

  14. Analysis of influential factors for the relationship between PM2.5 and AOD in Beijing

    NASA Astrophysics Data System (ADS)

    Zheng, Caiwang; Zhao, Chuanfeng; Zhu, Yannian; Wang, Yang; Shi, Xiaoqin; Wu, Xiaolin; Chen, Tianmeng; Wu, Fang; Qiu, Yanmei

    2017-11-01

    The relationship between aerosol optical depth (AOD) and PM2.5 is often investigated in order to obtain surface PM2.5 from satellite observation of AOD with a broad area coverage. However, various factors could affect the AOD-PM2.5 regressions. Using both ground and satellite observations in Beijing from 2011 to 2015, this study analyzes the influential factors including the aerosol type, relative humidity (RH), planetary boundary layer height (PBLH), wind speed and direction, and the vertical structure of aerosol distribution. The ratio of PM2.5 to AOD, which is defined as η, and the square of their correlation coefficient (R2) have been examined. It shows that η varies from 54.32 to 183.14, 87.32 to 104.79, 95.13 to 163.52, and 1.23 to 235.08 µg m-3 with aerosol type in spring, summer, fall, and winter, respectively. η is smaller for scattering-dominant aerosols than for absorbing-dominant aerosols, and smaller for coarse-mode aerosols than for fine-mode aerosols. Both RH and PBLH affect the η value significantly. The higher the RH, the smaller the η, and the higher the PBLH, the smaller the η. For AOD and PM2.5 data with the correction of RH and PBLH compared to those without, R2 of monthly averaged PM2.5 and AOD at 14:00 LT increases from 0.63 to 0.76, and R2 of multi-year averaged PM2.5 and AOD by time of day increases from 0.01 to 0.93, 0.24 to 0.84, 0.85 to 0.91, and 0.84 to 0.93 in four seasons respectively. Wind direction is a key factor for the transport and spatial-temporal distribution of aerosols originated from different sources with distinctive physicochemical characteristics. Similar to the variation in AOD and PM2.5, η also decreases with the increasing surface wind speed, indicating that the contribution of surface PM2.5 concentrations to AOD decreases with surface wind speed. The vertical structure of aerosol exhibits a remarkable change with seasons, with most particles concentrated within about 500 m in summer and within 150 m in winter

  15. Analysis of Influential Factors for the Relationship between PM2.5 and AOD in Beijing

    NASA Astrophysics Data System (ADS)

    Zheng, Caiwang; Zhao, Chuanfeng

    2017-04-01

    Relationship between aerosol optical depth (AOD) and PM2.5 is often investigated in order to obtain surface PM2.5 from satellite observation of AOD with a broad area coverage. However, various factors could affect the AOD-PM2.5 regressions. Using both ground and satellite observations in Beijing from 2011 to 2015, this study analyzes the influential factors including aerosol type, relative humidity (RH), atmospheric boundary layer height (PBLH), wind speed and direction, and the vertical structure of aerosol distribution. The ratio of PM2.5 to AOD, which is defined as η, and the square of their correlation coefficient (R2) have been examined. It shows that η varies from 54.32 to 183.14, 87.32 to 104.79, 95.13 to 163.52 and 1.23 to 235.08 μg/m3 with aerosol type in four seasons respectively. η is smaller for scattering-dominant aerosols than for absorbing-dominant aerosols, and smaller for coarse mode aerosols than for fine mode aerosols. Both RH and PBLH affect the η value significantly. The higher the RH, the larger the η, and the higher the PBLH, the smaller the η. For AOD and PM2.5 data with the correction of RH and PBLH compared to those without, R2 of monthly averaged PM2.5and AOD at 14:00 LT increases from 0.63 to 0.76, and R2 of multi-year averaged PM2.5and AOD by time of day increases from 0.1 to 0.93, 0.24 to 0.84, 0.85 to 0.91 and 0.84 to 0.93 in four seasons respectively. Wind direction is a key factor to the transport and spatial-temporal distribution of aerosols originated from different sources with distinctive physicochemical characteristics. Similar to the variation of AOD and PM2.5, η also decreases with the increasing surface wind speed, indicating that the contribution of surface PM2.5 concentrations to AOD decreases with surface wind speed. The vertical structure of aerosol exhibits a remarkable change with seasons, with most particles concentrated within about 500 m in summer and within 150 m in winter. Compared to the AOD of the whole

  16. Source identification and seasonal variation of polycyclic aromatic hydrocarbons associated with atmospheric fine and coarse particles in the Metropolitan Area of Porto Alegre, RS, Brazil

    NASA Astrophysics Data System (ADS)

    Teixeira, Elba Calesso; Agudelo-Castañeda, Dayana M.; Fachel, Jandyra Maria Guimarães; Leal, Karen Alam; Garcia, Karine de Oliveira; Wiegand, Flavio

    2012-11-01

    The purpose of the present study was to evaluate the polycyclic aromatic hydrocarbons (PAHs) in fine (PM2.5) and coarse particles (PM2.5-10) in an urban and industrial area in the Metropolitan Area of Porto Alegre (MAPA), Brazil. Sixteen U.S. Environmental Protection Agency (EPA) priority polycyclic aromatic hydrocarbons (PAHs) were measured. Filters containing ambient air particulate were extracted with dichloromethane using Soxhlet. Extracts were later analyzed, for determining PAH concentrations, using a gaseous chromatograph coupled with a mass spectrometer (GC-MS). The polycyclic aromatic hydrocarbons (PAHs) were more concentrated in PM2.5 with an average of 70% of total PAHs in the MAPA. The target PAH apportionment among the main emission sources was carried out by diagnostic PAH concentration ratios, and principal component analysis (PCA). PAHs with higher molecular weight showed higher percentages in the fine particles in the MAPA. Based on the diagnostic ratios and PCA analysis, it may be concluded that the major contribution of PAHs was from vehicular sources (diesel and gasoline), especially in the PM2.5 fraction, as well as coal and wood burning. The winter/summer ratio in the PM2.5 and PM2.5-10 fractions in the MAPA was 3.1 and 1.8, respectively, revealing the seasonal variation of PAHs in the two fractions. The estimated toxicity equivalent factor (TEF), used to assess the contribution of the carcinogenic potency, confirms a significant presence of the moderately active carcinogenic PAHs BaP and DahA in the samples collected in the MAPA.

  17. COMPARISON OF PM 2.5 AND PM 10 MONITORS

    EPA Science Inventory

    An extensive PM monitoring study was conducted during the 1998 Baltimore PM Epidemiology-Exposure Study of the Elderly. One goal was to investigate the mass concentration comparability between various monitoring instrumentation located across residential indoor, residential out...

  18. Comparison of five in vitro bioassays to measure estrogenic activity in environmental waters.

    PubMed

    Leusch, Frederic D L; de Jager, Christiaan; Levi, Yves; Lim, Richard; Puijker, Leo; Sacher, Frank; Tremblay, Louis A; Wilson, Vickie S; Chapman, Heather F

    2010-05-15

    Bioassays are well established in the pharmaceutical industry and single compound analysis, but there is still uncertainty about their usefulness in environmental monitoring. We compared the responses of five bioassays designed to measure estrogenic activity (the yeast estrogen screen, ER-CALUX, MELN, T47D-KBluc, and E-SCREEN assays) and chemical analysis on extracts from four different water sources (groundwater, raw sewage, treated sewage, and river water). All five bioassays displayed similar trends and there was good agreement with analytical chemistry results. The data from the ER-CALUX and E-SCREEN bioassays were robust and predictable, and well-correlated with predictions from chemical analysis. The T47D-KBluc appeared likewise promising, but with a more limited sample size it was less compelling. The YES assay was less sensitive than the other assays by an order of magnitude, which resulted in a larger number of nondetects. The MELN assay was less predictable, although the possibility that this was due to laboratory-specific difficulties cannot be discounted. With standardized bioassay data analysis and consistency of operating protocols, bioanalytical tools are a promising advance in the development of a tiered approach to environmental water quality monitoring.

  19. Characterizing metal(loid) solubility in airborne PM10, PM2.5 and PM1 in Frankfurt, Germany using simulated lung fluids

    NASA Astrophysics Data System (ADS)

    Wiseman, Clare L. S.; Zereini, Fathi

    2014-06-01

    The purpose of this study is to assess the solubility of traffic-related metal(loid)s associated with airborne PM of human health concern, employing a physiologically-based extraction test with simulated lung fluids (artificial lysosomal fluid (ALF) and Gamble's solution). Airborne PM (PM10, PM2.5 and PM1) samples were collected in Frankfurt am Main, Germany, using a high volume sampler. Following extraction of the soluble metal(loid) fractions, sample filters were digested with a high pressure asher. Metal(loid) concentrations (As, Ce, Co, Cr, Cu, Mn, Ni, Pb, Sb, Ti and V) were determined in extracts and digests per ICP-Q-MS. All metal(loid)s occurred at detectable concentrations in the three airborne PM fractions. Copper was the most abundant element in mass terms, with mean concentrations of 105 and 53 ng/m3 in PM10 and PM2.5, respectively. Many of the metal(loid)s were observed to be soluble in simulated lung fluids, with Cu, As, V and Sb demonstrating the highest overall mobility in airborne PM. For instance, all four elements associated with PM10 had a solubility of >80% in ALF (24 h). Clearly, solubility is strongly pH dependent, as reflected by the higher relative mobility of samples extracted with the acidic ALF. Given their demonstrated solubility, this study provides indirect evidence that a number of toxic metal(loid)s are likely to possess an enhanced pulmonary toxic potential upon their inhalation. The co-presence of many toxic elements of concern in airborne PM suggests an assessment of health risk must consider the possible interactive impacts of multi-element exposures.

  20. Quality of water types in Ukraine evaluated by WaterTox bioassays.

    PubMed

    Arkhipchuk, V V; Malinovskaya, M V

    2002-01-01

    The quality of river, ground-, and tap water was analyzed using the basic set of WaterTox bioassays [Daphnia (Daphnia magna), Hydra (Hydra attenuata), and lettuce (Lactuca sativa)] as well as two additional bioassays, onion (Allium cepa) and microalga (Selenastrum gracile). Samples of these waters were also concentrated fivefold using a solid-phase procedure. The results of the Daphnia and Hydra bioassays showed that the winter and spring concentrated and nonconcentrated samples from the Dnieper and Desna rivers, the main water supply sources for Kiev, were nontoxic. In spring, after concentration, the two river samples brought about the same relative decrease in the lettuce root length (by 35%, p < 0.001), where the Desna River sample considerably reduced (by 79.1%, p < 0.001) the number of microalga cells. Samples of groundwater from countryside wells studied in autumn in several villages of the Kiev region were toxic mainly to Hydra (sublethal effects were found in 11%-78%) and lettuce (the root length decreased 15%-56%). Studies of tap water samples from two of the largest cities of Ukraine, Kiev and Kharkiv, were found to be nontoxic to both plants, lettuce and onion, but showed increased sublethal and lethal effects on both animals, Daphnia and Hydra, as well as a reduced number of microalgae. Different bioassays were sensitive to varying degrees to different water types. This reinforces the necessity of using sets of bioassays in toxicity evaluation. In general, all the tested water samples demonstrated some toxicity. These data suggest that drinking water quality in Ukraine needs improvement. Copyright 2002 Wiley Periodicals, Inc.

  1. Activities of Jatropha curcas phorbol esters in various bioassays.

    PubMed

    Devappa, Rakshit K; Rajesh, Sanjay K; Kumar, Vikas; Makkar, Harinder P S; Becker, Klaus

    2012-04-01

    Jatropha curcas seeds contain 30-35% oil, which can be converted to high quality biodiesel. However, Jatropha oil is toxic, ascribed to the presence of phorbol esters (PEs). In this study, isolated phorbol ester rich fraction (PEEF) was used to evaluate the activity of PEs using three aquatic species based bioassays (snail (Physa fontinalis), brine shrimp (Artemeia salina), daphnia (Daphnia magna)) and microorganisms. In all the bioassays tested, increase in concentration of PEs increased mortality with an EC(50) (48 h) of 0.33, 26.48 and 0.95 mg L(-1) PEs for snail, artemia and daphnia, respectively. The sensitivity of various microorganisms for PEs was also tested. Among the bacterial species tested, Streptococcus pyogenes and Proteus mirabilis were highly susceptible with a minimum inhibitory concentration (MIC) of 215 mg L(-1) PEs; and Pseudomonas putida were also sensitive with MIC of 251 mg L(-1) PEs. Similarly, Fusarium species of fungi exhibited EC(50) of 58 mg L(-1) PEs, while Aspergillus niger and Curvularia lunata had EC(50) of 70 mg L(-1). The snail bioassay was most sensitive with 100% snail mortality at 1 μg of PEs mL(-1). In conclusion, snail bioassay could be used to monitor PEs in Jatropha derived products such as oil, biodiesel, fatty acid distillate, kernel meal, cake, glycerol or for contamination in soil or other environmental matrices. In addition, PEs with molluscicidal/antimicrobial activities could be utilized for agricultural and pharmaceutical applications. Copyright © 2011 Elsevier Inc. All rights reserved.

  2. 77 FR 73923 - Approval and Promulgation of Air Quality Implementation Plans; West Virginia; The 2002 Base Year...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-12

    ... , coarse particles (PM 10 ), ammonia (NH 3 ) and sulfur dioxide (SO 2 ). WVDEP selected the year 2002 as... nitrogen oxides (NO X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH...

  3. Bioassay for estimating the biogenic methane-generating potential of coal samples

    USGS Publications Warehouse

    Jones, Elizabeth J.P.; Voytek, Mary A.; Warwick, Peter D.; Corum, Margo D.; Cohn, Alexander G.; Bunnell, Joseph E.; Clark, Arthur C.; Orem, William H.

    2008-01-01

    Generation of secondary biogenic methane in coal beds is likely controlled by a combination of factors such as the bioavailability of coal carbon, the presence of a microbial community to convert coal carbon to methane, and an environment supporting microbial growth and methanogenesis. A set of treatments and controls was developed to bioassay the bioavailability of coal for conversion to methane under defined laboratory conditions. Treatments included adding a well-characterized consortium of bacteria and methanogens (enriched from modern wetland sediments) and providing conditions to support endemic microbial activity. The contribution of desorbed methane in the bioassays was determined in treatments with bromoethane sulfonic acid, an inhibitor of microbial methanogenesis. The bioassay compared 16 subbituminous coal samples collected from beds in Texas (TX), Wyoming (WY), and Alaska (AK), and two bituminous coal samples from Pennsylvania (PA). New biogenic methane was observed in several samples of subbituminous coal with the microbial consortium added, but endemic activity was less commonly observed. The highest methane generation [80 µmol methane/g coal (56 scf/ton or 1.75 cm3/g)] was from a south TX coal sample that was collected from a non-gas-producing well. Subbituminous coals from the Powder River Basin, WY and North Slope Borough, AK contained more sorbed (original) methane than the TX coal sample and generated 0–23 µmol/g (up to 16 scf/ton or 0.5 cm3/g) new biogenic methane in the bioassay. Standard indicators of thermal maturity such as burial depth, nitrogen content, and calorific value did not explain differences in biogenic methane among subbituminous coal samples. No original methane was observed in two bituminous samples from PA, nor was any new methane generated in bioassays of these samples. The bioassay offers a new tool for assessing the potential of coal for biogenic methane generation, and provides a platform for studying the

  4. Two case studies of highly insoluble plutonium inhalation with implications for bioassay.

    PubMed

    Carbaugh, E H; La Bone, T R

    2003-01-01

    Two well characterised Pu inhalation cases show some remarkable similarities between substantially different types of Pu oxide. The circumstances of exposure, therapy, bioassay data, chemical solubility studies and dosimetry associated with these cases suggest that highly insoluble Pu may be more common than previously thought, and can pose significant challenges to bioassay programmes.

  5. Two Case Studies of Highly Insoluble Plutonium Inhalation with Implications for Bioassay

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carbaugh, Eugene H.; La Bone, Thomas R.

    2003-01-01

    Two well-characterized Pu inhalation cases show some remarkable similarities between substantially different types of Pu oxide. The circumstances of exposure, therapy, bioassay data, chemical solubility studies, and dosimetry associated with these cases suggests taht highly insoluble Pu may be more common than previously thought, and can pose significant challenges to bioassay programs.

  6. Characterization of PAHs and metals in indoor/outdoor PM10/PM2.5/PM1 in a retirement home and a school dormitory.

    PubMed

    Hassanvand, Mohammad Sadegh; Naddafi, Kazem; Faridi, Sasan; Nabizadeh, Ramin; Sowlat, Mohammad Hossein; Momeniha, Fatemeh; Gholampour, Akbar; Arhami, Mohammad; Kashani, Homa; Zare, Ahad; Niazi, Sadegh; Rastkari, Noushin; Nazmara, Shahrokh; Ghani, Maryam; Yunesian, Masud

    2015-09-15

    In the present work, we investigated the characteristics of polycyclic aromatic hydrocarbons (PAHs) and metal(loid)s in indoor/outdoor PM10, PM2.5, and PM1 in a retirement home and a school dormitory in Tehran from May 2012 to May 2013. The results indicated that the annual levels of indoor and outdoor PM10 and PM2.5 were much higher than the guidelines issued by the World Health Organization (WHO). The most abundant detected metal(loid)s in PM were Si, Fe, Zn, Al, and Pb. We found higher percentages of metal(loid)s in smaller size fractions of PM. Additionally, the results showed that the total PAHs (ƩPAHs) bound to PM were predominantly (83-88%) found in PM2.5, which can penetrate deep into the alveolar regions of the lungs. In general, carcinogenic PAHs accounted for 40-47% of the total PAHs concentrations; furthermore, the smaller the particle size, the higher the percentage of carcinogenic PAHs. The percentages of trace metal(loid)s and carcinogenic PAHs in PM2.5 mass were almost twice as high as those in PM10. This can most likely be responsible for the fact that PM2.5 can cause more adverse health effects than PM10 can. The average BaP-equivalent carcinogenic (BaP-TEQ) levels both indoors and outdoors considerably exceeded the maximum permissible risk level of 1 ng/m(3) of BaP. The enrichment factors and diagnostic ratios indicated that combustion-related anthropogenic sources, such as gasoline- and diesel-fueled vehicles as well as natural gas combustion, were the major sources of PAHs and trace metal(loid)s bound to PM. Copyright © 2015 Elsevier B.V. All rights reserved.

  7. Episodic acidification of small streams in the northeastern united states: Fish mortality in field bioassays

    USGS Publications Warehouse

    Van Sickle, J.; Baker, J.P.; Simonin, H.A.; Baldigo, Barry P.; Kretser, W.A.; Sharpe, W.E.

    1996-01-01

    In situ bioassays were performed as part of the Episodic Response Project, to evaluate the effects of episodic stream acidification on mortality of brook trout (Salvelinus fontinalis) and forage fish species. We report the results of 122 bioassays in 13 streams of the three study regions: the Adirondack mountains of New York, the Catskill mountains of New York, and the Northern Appalachian Plateau of Pennsylvania. Bioassays during acidic episodes had significantly higher mortality than did bioassays conducted under nonacidic conditions, but there was little difference in mortality rates in bioassays experiencing acidic episodes and those experiencing acidic conditions throughout the test period. Multiple logistic regression models were used to relate bioassay mortality rates to summary statistics of time-varying stream chemistry (inorganic monomeric aluminum, calcium, pH, and dissolved organic carbon) estimated for the 20-d bioassay periods. The large suite of candidate regressors also included biological, regional, and seasonal factors, as well as several statistics summarizing various features of aluminum exposure duration and magnitude. Regressor variable selection and model assessment were complicated by multicol-linearity and overdispersion. For the target fish species, brook trout, bioassay mortality was most closely related to time-weighted median inorganic aluminum. Median Ca and minimum pH offered additional explanatory power, as did stream-specific aluminum responses. Due to high multicollinearity, the relative importance of different aluminum exposure duration and magnitude variables was difficult to assess, but these variables taken together added no significant explanatory power to models already containing median aluminum. Between 59 and 79% of the variation in brook trout mortality was explained by models employing between one and five regressors. Simpler models were developed for smaller sets of bioassays that tested slimy and mottled sculpin

  8. Airborne foliar transfer of PM bound heavy metals in Cassia siamea: A less common route of heavy metal accumulation.

    PubMed

    Gajbhiye, Triratnesh; Pandey, Sudhir Kumar; Kim, Ki-Hyun; Szulejko, Jan E; Prasad, Satgur

    2016-12-15

    In order to investigate possible foliar transfer of toxic heavy metals, concentrations of Cd, Pb, and Fe were measured in samples of: Cassia siamea leaves (a common tree) Cassia siamea foliar dust, nearby road dust, and soil (Cassia siamea tree roots) at six different sites in/around the Bilaspur industrial area and a control site on the university campus. Bilaspur is located in a subtropical central Indian region. The enrichment factor (EF) values of Pb and Cd, when derived using the crustal and measured soil Fe data as reference, indicated significant anthropogenic contributions to Pb and Cd regional pollution. Based on correlation analysis and scanning electron microscopy (SEM) observations, it was evident that Pb and Cd in foliar part of Cassia siamea were largely from airborne sources. The SEM studies of leaf confirmed that leaf morphology (epidermis, trichome, and stomata) of Cassia siamea helped accumulate the toxic metals from deposited particulate matter (PM). There is a line of evidence that the leaf of Cassia siamea was able to entrap PM in respirable suspended particulate matter (RSPM) range (i.e., both in fine and coarse fractions). The overall results of this study suggest that Cassia siamea can be a potential plant species to control the pollution of PM and PM-bound metals (Pb and Cd) in affected areas. Copyright © 2016 Elsevier B.V. All rights reserved.

  9. 77 FR 65630 - Approval and Promulgation of Air Quality Implementation Plans; District of Columbia; The 2002...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-30

    ... oxides (NO X ), volatile organic compounds (VOCs), PM 2.5 , coarse particles (PM 10 ), ammonia (NH 3... , coarse particles (PM 10 ), ammonia (NH 3 ), and sulfur dioxide (SO 2 ). [FR Doc. 2012-26530 Filed 10-29...

  10. The Spatial and Seasonal Variability in Fine Mineral Dust and Coarse Mass Concentrations at Remote Sites across the United States

    NASA Astrophysics Data System (ADS)

    Hand, J. L.; White, W. H.; Hyslop, N. P.; Schichtel, B. A.; Gill, T. E.

    2016-12-01

    Mineral dust influences air quality, visibility, health, hydrology, heterogeneous chemistry, biogeochemistry, ecology, and climate. The spatial and seasonal variability of fine (PM2.5) mineral dust (FD, mineral particles with diameters less than 2.5 µm) and coarse mass (CM, mass of particles with diameters between 2.5 and 10 µm) were characterized at over 160 rural and remote sites in the United States from the Interagency Monitoring of Protected Visual Environments (IMPROVE) network. Monthly, seasonal, and annual means were computed for 2011 through 2014 to investigate the spatial and seasonal variability of FD and CM. Regions with significant FD included the Southwest in spring (≥ 50% contributions to PM2.5 mass) and in the Midwest, Midsouth, and Southeast regions in summer (20-30% of PM2.5 mass). The seasonality of FD and CM decoupled farther from local source regions suggesting long-range transport of FD or non-dust related CM. FD mineralogy was also explored and confirmed the seasonal and regional impacts of long-range transport. Temporal trends in FD from 2000-2014 revealed regions and seasons with significantly increased FD, especially the Southwest during spring months, the central United States during summer and fall, and the Southeast in summer—all regions that were associated with significant contributions of FD to PM2.5 mass. Positive trends in FD contrast negative trends in other major aerosol species over the same time periods, further enhancing the relative importance of FD to PM2.5 mass. Increased levels of FD have important implications for its environmental and climate impacts; mitigating these impacts will require identifying and characterizing source regions and causal mechanisms for dust episodes in order to better inform resource management decisions.

  11. Profiling animal toxicants by automatically mining public bioassay data: a big data approach for computational toxicology.

    PubMed

    Zhang, Jun; Hsieh, Jui-Hua; Zhu, Hao

    2014-01-01

    In vitro bioassays have been developed and are currently being evaluated as potential alternatives to traditional animal toxicity models. Already, the progress of high throughput screening techniques has resulted in an enormous amount of publicly available bioassay data having been generated for a large collection of compounds. When a compound is tested using a collection of various bioassays, all the testing results can be considered as providing a unique bio-profile for this compound, which records the responses induced when the compound interacts with different cellular systems or biological targets. Profiling compounds of environmental or pharmaceutical interest using useful toxicity bioassay data is a promising method to study complex animal toxicity. In this study, we developed an automatic virtual profiling tool to evaluate potential animal toxicants. First, we automatically acquired all PubChem bioassay data for a set of 4,841 compounds with publicly available rat acute toxicity results. Next, we developed a scoring system to evaluate the relevance between these extracted bioassays and animal acute toxicity. Finally, the top ranked bioassays were selected to profile the compounds of interest. The resulting response profiles proved to be useful to prioritize untested compounds for their animal toxicity potentials and form a potential in vitro toxicity testing panel. The protocol developed in this study could be combined with structure-activity approaches and used to explore additional publicly available bioassay datasets for modeling a broader range of animal toxicities.

  12. Profiling Animal Toxicants by Automatically Mining Public Bioassay Data: A Big Data Approach for Computational Toxicology

    PubMed Central

    Zhang, Jun; Hsieh, Jui-Hua; Zhu, Hao

    2014-01-01

    In vitro bioassays have been developed and are currently being evaluated as potential alternatives to traditional animal toxicity models. Already, the progress of high throughput screening techniques has resulted in an enormous amount of publicly available bioassay data having been generated for a large collection of compounds. When a compound is tested using a collection of various bioassays, all the testing results can be considered as providing a unique bio-profile for this compound, which records the responses induced when the compound interacts with different cellular systems or biological targets. Profiling compounds of environmental or pharmaceutical interest using useful toxicity bioassay data is a promising method to study complex animal toxicity. In this study, we developed an automatic virtual profiling tool to evaluate potential animal toxicants. First, we automatically acquired all PubChem bioassay data for a set of 4,841 compounds with publicly available rat acute toxicity results. Next, we developed a scoring system to evaluate the relevance between these extracted bioassays and animal acute toxicity. Finally, the top ranked bioassays were selected to profile the compounds of interest. The resulting response profiles proved to be useful to prioritize untested compounds for their animal toxicity potentials and form a potential in vitro toxicity testing panel. The protocol developed in this study could be combined with structure-activity approaches and used to explore additional publicly available bioassay datasets for modeling a broader range of animal toxicities. PMID:24950175

  13. In vitro bioassays to evaluate complex chemical mixtures in recycled water.

    PubMed

    Jia, Ai; Escher, Beate I; Leusch, Frederic D L; Tang, Janet Y M; Prochazka, Erik; Dong, Bingfeng; Snyder, Erin M; Snyder, Shane A

    2015-09-01

    With burgeoning population and diminishing availability of freshwater resources, the world continues to expand the use of alternative water resources for drinking, and the quality of these sources has been a great concern for the public as well as public health professionals. In vitro bioassays are increasingly being used to enable rapid, relatively inexpensive toxicity screening that can be used in conjunction with analytical chemistry data to evaluate water quality and the effectiveness of water treatment. In this study, a comprehensive bioassay battery consisting of 36 bioassays covering 18 biological endpoints was applied to screen the bioactivity of waters of varying qualities with parallel treatments. Samples include wastewater effluent, ultraviolet light (UV) and/or ozone advanced oxidation processed (AOP) recycled water, and infiltrated recycled groundwater. Based on assay sensitivity and detection frequency in the samples, several endpoints were highlighted in the battery, including assays for genotoxicity, mutagenicity, estrogenic activity, glucocorticoid activity, arylhydrocarbon receptor activity, oxidative stress response, and cytotoxicity. Attenuation of bioactivity was found to be dependent on the treatment process and bioassay endpoint. For instance, ozone technology significantly removed oxidative stress activity, while UV based technologies were most efficient for the attenuation of glucocorticoid activity. Chlorination partially attenuated genotoxicity and greatly decreased herbicidal activity, while groundwater infiltration efficiently attenuated most of the evaluated bioactivity with the exception of genotoxicity. In some cases, bioactivity (e.g., mutagenicity, genotoxicity, and arylhydrocarbon receptor) increased following water treatment, indicating that transformation products of water treatment may be a concern. Furthermore, several types of bioassays with the same endpoint were compared in this study, which could help guide the selection

  14. Interlaced coarse-graining for the dynamical cluster approximation

    NASA Astrophysics Data System (ADS)

    Haehner, Urs; Staar, Peter; Jiang, Mi; Maier, Thomas; Schulthess, Thomas

    The negative sign problem remains a challenging limiting factor in quantum Monte Carlo simulations of strongly correlated fermionic many-body systems. The dynamical cluster approximation (DCA) makes this problem less severe by coarse-graining the momentum space to map the bulk lattice to a cluster embedded in a dynamical mean-field host. Here, we introduce a new form of an interlaced coarse-graining and compare it with the traditional coarse-graining. We show that it leads to more controlled results with weaker cluster shape and smoother cluster size dependence, which with increasing cluster size converge to the results obtained using the standard coarse-graining. In addition, the new coarse-graining reduces the severity of the fermionic sign problem. Therefore, it enables calculations on much larger clusters and can allow the evaluation of the exact infinite cluster size result via finite size scaling. To demonstrate this, we study the hole-doped two-dimensional Hubbard model and show that the interlaced coarse-graining in combination with the DCA+ algorithm permits the determination of the superconducting Tc on cluster sizes, for which the results can be fitted with the Kosterlitz-Thouless scaling law. This research used resources of the Oak Ridge Leadership Computing Facility (OLCF) awarded by the INCITE program, and of the Swiss National Supercomputing Center. OLCF is a DOE Office of Science User Facility supported under Contract DE-AC05-00OR22725.

  15. Evaluation of various coarse aggregate concretes : final report.

    DOT National Transportation Integrated Search

    1983-10-01

    This study was initiated to determine the properties of concrete using three types of coarse aggregate. The coarse aggregates evaluated in this study included silicious gravel, the standard aggregate for concrete in the state, with sandstone and lime...

  16. Coarse Particulate Air Pollution Associated with Increased Risk of Hospital Admissions for Respiratory Diseases in a Tropical City, Kaohsiung, Taiwan.

    PubMed

    Cheng, Meng-Hsuan; Chiu, Hui-Fen; Yang, Chun-Yuh

    2015-10-16

    This study was undertaken to determine whether there was an association between coarse particles (PM₂.₅-₁₀) levels and frequency of hospital admissions for respiratory diseases (RD) in Kaohsiung, Taiwan. Hospital admissions for RD including chronic obstructive pulmonary disease (COPD), asthma, and pneumonia, and ambient air pollution data levels for Kaohsiung were obtained for the period from 2006 to 2010. The relative risk of hospital admissions for RD was estimated using a case-crossover approach, controlling for weather variables, day of the week, seasonality, and long-term time trends. For the single pollutant model (without adjustment for other pollutants), increased rate of admissions for RD were significantly associated with higher coarse PM levels only on cool days (<25 °C), with a 10 µg/m³ elevation in PM₂.₅-₁₀ concentrations associated with a 3% (95% CI = 1%-5%) rise in COPD admissions, 4% (95% CI = 1%-7%) increase in asthma admissions, and 3% (95% CI = 2%-4%) rise in pneumonia admissions. No significant associations were found between coarse particle levels and the number of hospital admissions for RD on warm days. In the two-pollutant models, PM₂.₅-₁₀ levels remained significantly correlated with higher rate of RD admissions even controlling for sulfur dioxide, nitrogen dioxide, carbon monoxide, or ozone on cool days. This study provides evidence that higher levels of PM₂.₅-₁₀ enhance the risk of hospital admissions for RD on cool days.

  17. Multivariate methods for indoor PM10 and PM2.5 modelling in naturally ventilated schools buildings

    NASA Astrophysics Data System (ADS)

    Elbayoumi, Maher; Ramli, Nor Azam; Md Yusof, Noor Faizah Fitri; Yahaya, Ahmad Shukri Bin; Al Madhoun, Wesam; Ul-Saufie, Ahmed Zia

    2014-09-01

    In this study the concentrations of PM10, PM2.5, CO and CO2 concentrations and meteorological variables (wind speed, air temperature, and relative humidity) were employed to predict the annual and seasonal indoor concentration of PM10 and PM2.5 using multivariate statistical methods. The data have been collected in twelve naturally ventilated schools in Gaza Strip (Palestine) from October 2011 to May 2012 (academic year). The bivariate correlation analysis showed that the indoor PM10 and PM2.5 were highly positive correlated with outdoor concentration of PM10 and PM2.5. Further, Multiple linear regression (MLR) was used for modelling and R2 values for indoor PM10 were determined as 0.62 and 0.84 for PM10 and PM2.5 respectively. The Performance indicators of MLR models indicated that the prediction for PM10 and PM2.5 annual models were better than seasonal models. In order to reduce the number of input variables, principal component analysis (PCA) and principal component regression (PCR) were applied by using annual data. The predicted R2 were 0.40 and 0.73 for PM10 and PM2.5, respectively. PM10 models (MLR and PCR) show the tendency to underestimate indoor PM10 concentrations as it does not take into account the occupant's activities which highly affect the indoor concentrations during the class hours.

  18. Bioassays for Evaluating Water Quality-Technical Brief

    EPA Pesticide Factsheets

    Bioassays are a potential solution for assessing complex samples since they screen for total bioactivity for a given pathway or mode of action (MOA), such as estrogen receptor activation, in the samples. EPA has made considerable progress in the developmen

  19. A rapid bioassay for detecting saxitoxins using a Daphnia acute toxicity test.

    PubMed

    Ferrão-Filho, Aloysio da S; Soares, Maria Carolina S; de Magalhães, Valéria Freitas; Azevedo, Sandra M F O

    2010-06-01

    Bioassays using Daphnia pulex and Moina micrura were designed to detect cyanobacterial neurotoxins in raw water samples. Phytoplankton and cyanotoxins from seston were analyzed during 15 months in a eutrophic reservoir. Effective time to immobilize 50% of the exposed individuals (ET50) was adopted as the endpoint. Paralysis of swimming movements was observed between approximately 0.5-3 h of exposure to lake water containing toxic cyanobacteria, followed by an almost complete recovery of the swimming activity within 24 h after being placed in control water. The same effects were observed in bioassays with a saxitoxin-producer strain of Cylindrospermopsis raciborskii isolated from the reservoir. Regression analysis showed significant relationships between ET50 vs. cell density, biomass and saxitoxins content, suggesting that the paralysis of Daphnia in lake water samples was caused by saxitoxins found in C. raciborskii. Daphnia bioassay was found to be a sensitive method for detecting fast-acting neurotoxins in natural samples, with important advantages over mouse bioassays. Copyright 2010 Elsevier Ltd. All rights reserved.

  20. A PROBABILISTIC POPULATION EXPOSURE MODEL FOR PM10 AND PM 2.5

    EPA Science Inventory

    A first generation probabilistic population exposure model for Particulate Matter (PM), specifically for predicting PM10, and PM2.5, exposures of an urban, population has been developed. This model is intended to be used to predict exposure (magnitude, frequency, and duration) ...

  1. Benchmarking organic micropollutants in wastewater, recycled water and drinking water with in vitro bioassays.

    PubMed

    Escher, Beate I; Allinson, Mayumi; Altenburger, Rolf; Bain, Peter A; Balaguer, Patrick; Busch, Wibke; Crago, Jordan; Denslow, Nancy D; Dopp, Elke; Hilscherova, Klara; Humpage, Andrew R; Kumar, Anu; Grimaldi, Marina; Jayasinghe, B Sumith; Jarosova, Barbora; Jia, Ai; Makarov, Sergei; Maruya, Keith A; Medvedev, Alex; Mehinto, Alvine C; Mendez, Jamie E; Poulsen, Anita; Prochazka, Erik; Richard, Jessica; Schifferli, Andrea; Schlenk, Daniel; Scholz, Stefan; Shiraishi, Fujio; Snyder, Shane; Su, Guanyong; Tang, Janet Y M; van der Burg, Bart; van der Linden, Sander C; Werner, Inge; Westerheide, Sandy D; Wong, Chris K C; Yang, Min; Yeung, Bonnie H Y; Zhang, Xiaowei; Leusch, Frederic D L

    2014-01-01

    Thousands of organic micropollutants and their transformation products occur in water. Although often present at low concentrations, individual compounds contribute to mixture effects. Cell-based bioassays that target health-relevant biological endpoints may therefore complement chemical analysis for water quality assessment. The objective of this study was to evaluate cell-based bioassays for their suitability to benchmark water quality and to assess efficacy of water treatment processes. The selected bioassays cover relevant steps in the toxicity pathways including induction of xenobiotic metabolism, specific and reactive modes of toxic action, activation of adaptive stress response pathways and system responses. Twenty laboratories applied 103 unique in vitro bioassays to a common set of 10 water samples collected in Australia, including wastewater treatment plant effluent, two types of recycled water (reverse osmosis and ozonation/activated carbon filtration), stormwater, surface water, and drinking water. Sixty-five bioassays (63%) showed positive results in at least one sample, typically in wastewater treatment plant effluent, and only five (5%) were positive in the control (ultrapure water). Each water type had a characteristic bioanalytical profile with particular groups of toxicity pathways either consistently responsive or not responsive across test systems. The most responsive health-relevant endpoints were related to xenobiotic metabolism (pregnane X and aryl hydrocarbon receptors), hormone-mediated modes of action (mainly related to the estrogen, glucocorticoid, and antiandrogen activities), reactive modes of action (genotoxicity) and adaptive stress response pathway (oxidative stress response). This study has demonstrated that selected cell-based bioassays are suitable to benchmark water quality and it is recommended to use a purpose-tailored panel of bioassays for routine monitoring.

  2. Evaluation of the toxicity of two soils from Jales Mine (Portugal) using aquatic bioassays.

    PubMed

    Loureiro, Susana; Ferreira, Abel L G; Soares, Amadeu M V M; Nogueira, António J A

    2005-10-01

    Soil contamination can be one path for streams and groundwater contamination. As a complement of chemical analysis and total contaminants determination, bioassays can provide information on the bioavailable fraction of chemical compounds, focusing on the retention and habitat function of soils. In this study the evaluation of the toxicity of two soils from the abandoned Jales Mine (Portugal) regarded both functions. The buffer capacity of soils was tested with bioassays carried out using the cladoceran Daphnia magna and the marine bacteria Vibrio fischeri. The habitat function of soils was evaluated with the reproduction bioassay with the collembolan Folsomia candida. The Microtox solid-phase test was performed with V. fischeri using soil as test medium, and soil elutriates were extracted to perform the Microtox basic test, and an immobilization and reproduction bioassay with D. magna. The marine bacteria showed high sensitivity to the soil with low heavy metal content (JNC soil) and to JNC soil elutriates, while the soil with highest heavy metal content (JC soil) or soil elutriates exposure did not cause any toxic effect. In the bioassays with D. magna, organisms showed sensitivity to JNC and also to JC soil elutriates. Both mobilization and reproduction features were inhibited. The bioassay with F. candida did not reflect any influence of the contaminants on their reproduction. Although JNC soil presented lower heavy metal contents, elutriates showed different patterns of contamination when compared to JC soil and elutriates, which indicates different retention and buffer capacities between soils. Results obtained in this study underlined the sensitivity and importance of soil elutriate bioassays with aquatic organisms in the evaluation strategy in soil ERA processes.

  3. A versatile electrowetting-based digital microfluidic platform for quantitative homogeneous and heterogeneous bio-assays

    NASA Astrophysics Data System (ADS)

    Vergauwe, Nicolas; Witters, Daan; Ceyssens, Frederik; Vermeir, Steven; Verbruggen, Bert; Puers, Robert; Lammertyn, Jeroen

    2011-05-01

    Electrowetting-on-dielectric (EWOD) lab-on-a-chip systems have already proven their potential within a broad range of bio-assays. Nevertheless, research on the analytical performance of those systems is limited, yet crucial for a further breakthrough in the diagnostic field. Therefore, this paper presents the intrinsic possibilities of an EWOD lab-on-a-chip as a versatile platform for homogeneous and heterogeneous bio-assays with high analytical performance. Both droplet dispensing and splitting cause variations in droplet size, thereby directly influencing the assay's performance. The extent to which they influence the performance is assessed by a theoretical sensitivity analysis, which allows the definition of a basic framework for the reduction of droplet size variability. Taking advantage of the optimized droplet manipulations, both homogeneous and heterogeneous bio-assays are implemented in the EWOD lab-on-a-chip to demonstrate the analytical capabilities and versatility of the device. A fully on-chip enzymatic assay is realized with high analytical performance. It demonstrates the promising capabilities of an EWOD lab-on-a-chip in food-related and medical applications, such as nutritional and blood analyses. Further, a magnetic bio-assay for IgE detection using superparamagnetic nanoparticles is presented whereby the nanoparticles are used as solid carriers during the bio-assay. Crucial elements are the precise manipulation of the superparamagnetic nanoparticles with respect to dispensing and separation. Although the principle of using nano-carriers is demonstrated for protein detection, it can be easily extended to a broader range of bio-related applications like DNA sensing. In heterogeneous bio-assays the chip surface is actively involved during the execution of the bio-assay. Through immobilization of specific biological compounds like DNA, proteins and cells a reactive chip surface is realized, which enhances the bio-assay performance. To demonstrate

  4. Variations of PM2.5, PM10 mass concentration and health assessment in Islamabad, Pakistan

    NASA Astrophysics Data System (ADS)

    Memhood, Tariq; Tianle, Z.; Ahmad, I.; Li, X.; Shen, F.; Akram, W.; Dong, L.

    2018-04-01

    Sparse information appears in lack of awareness among the people regarding the linkage between particulate matter (PM) and mortality in Pakistan. The current study is aimed to investigate the seasonal mass concentration level of PM2.5 and PM10 in ambient air of Islamabad to assess the health risk of PM pollution. The sampling was carried out with two parallel medium volume air samplers on Whatman 47 mm quartz filter at a flow rate of 100L/min. Mass concentration was obtained by gravimetric analysis. A noticeable seasonal change in PM10 and PM2.5 mass concentration was observed. In case of PM2.5, the winter was a most polluted and spring was the cleanest season of 2017 in Islamabad with 69.97 and 40.44 μgm‑3 mean concentration. Contrary, highest (152.42 μgm‑3) and lowest (74.90 μgm‑3) PM10 mass concentration was observed in autumn and summer respectively. Air Quality index level for PM2.5 and PM10 was remained moderated to unhealthy and good to sensitive respectively. Regarding health risk assessment, using national data for mortality rates, the excess mortality due to PM2.5 and PM10 exposure has been calculated and amounts to over 198 and 98 deaths annually for Islamabad. Comparatively estimated lifetime risk for PM2.5 (1.16×10-6) was observed higher than PM10 (7.32×10-8).

  5. On relationship between aerosols and PM2.5

    NASA Astrophysics Data System (ADS)

    Sano, Itaru; Mukai, Sonoyo; Nakata, Makiko

    2015-04-01

    of aerosols, i.e., AOT, volume fraction of fine and coarse mode particles, also single scattering albedo. Here is brief description of our aerosol retrieval and PM2.5 estimation. 1. Atmospheric correction is applied for each channel image based on AERONET measurements, Averaged surface albedo is calculated based on 1 month window, 2. Aerosol optical properties are estimated by using surface albedo and satellite imagery. 3. Obtained columnar AOT information is converted to surface AOT with LIDAR data. 4. PM2.5 distribution is obtained from the relationship given in the above item 3. [Holben et al., 1998] B. N. Holben, T. F. Eck, I. Slutsker, D. Tanré, J.P. Buis, A. Setzer, E. Vermote, J. A. Reagan, Y. Kaufman, T. Nakajima, F. Lavenu, I. Jankowiak, and A. Smirnov, "AERONET - A federated instrument network and data archive for aerosol characterization," Rem. Sens. Environ., Vol. 66, pp. 1-16, 1998. [Smirnov et al., 2000] A. Smirnov, B.N. Holben, D. Savoie, J.M. Prospero, Y.J. Kaufman, D. Tanré, T.F. Eck, and I. Slutsker, "Relationship between column aerosol optical thickness and in situ ground based dust concentrations over Barbados," Geophy. Res. Lett., Vol. 27, pp. 1643-1646, 2000. [Wang and Christopher, 2003] J. Wang and S. A. Christopher, "Intercomparison between satellite-derived aerosol optical thickness and PM2.5 mass: Implications for air quality studies," Geophys. Res. Lett., Vol. 30, 2095, doi:10.1029/2003GL018174, 2003. [Sano et al., 2010] I. Sano, M. Mukai (Nakata), N. Iguchi, and S. Mukai, "Suspended particulate matter sampling at an urban AERONET site in Japan, part 2: relationship between column aerosol optical thickness and PM2.5 concentration," J. Appl. Remote Sens., Vol. 4, 043504, doi:10.1117/1.3327930, 2010.

  6. Indoor/outdoor relationships of PM10, PM2.5, and PM1 mass concentrations and their water-soluble ions in a retirement home and a school dormitory

    NASA Astrophysics Data System (ADS)

    Hassanvand, Mohammad Sadegh; Naddafi, Kazem; Faridi, Sasan; Arhami, Mohammad; Nabizadeh, Ramin; Sowlat, Mohammad Hossein; Pourpak, Zahra; Rastkari, Noushin; Momeniha, Fatemeh; Kashani, Homa; Gholampour, Akbar; Nazmara, Shahrokh; Alimohammadi, Mahmood; Goudarzi, Gholamreza; Yunesian, Masud

    2014-01-01

    Indoor/outdoor particulate matter (PM10, PM2.5, and PM1) and their water-soluble ions were measured in a retirement home and a school dormitory in Tehran, from May 2012 to January 2013. Hourly indoor/outdoor PM concentrations were measured using GRIMM dust monitors and 24-h aerosol samples were collected by low-volume air samplers. Water-soluble ions were determined using an ion chromatography (IC) instrument. Although the mean outdoor PM concentrations in both sampling sites were almost equal, the mean indoor PM10 in the school dormitory was approximately 1.35 times higher than that in the retirement home. During a Middle Eastern dust storm, the 24-h average PM10, PM2.5, and PM1 concentrations were respectively 3.4, 2.9, and 1.9 times as high as those in normal days outdoors and 3.4, 2.8, and 1.6 times indoors. The results indicated that secondary inorganic aerosols were the dominant water-soluble ions of indoor and outdoor PM. We found that the smaller the particle, the higher the percentage of secondary inorganic aerosols. Except for PM10 in the school dormitory, strong correlations were found between indoor and outdoor PM. We estimated that nearly 45% of PM10, 67% of PM2.5, and 79% of PM1 in the retirement home, and 32% of PM10, 76% of PM2.5, and 83% of PM1 in the school dormitory originated from outdoor environment.

  7. Role of translational entropy in spatially inhomogeneous, coarse-grained models

    NASA Astrophysics Data System (ADS)

    Langenberg, Marcel; Jackson, Nicholas E.; de Pablo, Juan J.; Müller, Marcus

    2018-03-01

    Coarse-grained models of polymer and biomolecular systems have enabled the computational study of cooperative phenomena, e.g., self-assembly, by lumping multiple atomistic degrees of freedom along the backbone of a polymer, lipid, or DNA molecule into one effective coarse-grained interaction center. Such a coarse-graining strategy leaves the number of molecules unaltered. In order to treat the surrounding solvent or counterions on the same coarse-grained level of description, one can also stochastically group several of those small molecules into an effective, coarse-grained solvent bead or "fluid element." Such a procedure reduces the number of molecules, and we discuss how to compensate the concomitant loss of translational entropy by density-dependent interactions in spatially inhomogeneous systems.

  8. Assessment of acrylamide toxicity using a battery of standardised bioassays.

    PubMed

    Zovko, Mira; Vidaković-Cifrek, Željka; Cvetković, Želimira; Bošnir, Jasna; Šikić, Sandra

    2015-12-01

    Acrylamide is a monomer widely used as an intermediate in the production of organic chemicals, e.g. polyacrylamides (PAMs). Since PAMs are low cost chemicals with applications in various industries and waste- and drinking water treatment, a certain amount of non-polymerised acrylamide is expected to end up in waterways. PAMs are non-toxic but acrylamide induces neurotoxic effects in humans and genotoxic, reproductive, and carcinogenic effects in laboratory animals. In order to evaluate the effect of acrylamide on freshwater organisms, bioassays were conducted on four species: algae Desmodesmus subspicatus and Pseudokirchneriella subcapitata, duckweed Lemna minor and water flea Daphnia magna according to ISO (International Organization for Standardisation) standardised methods. This approach ensures the evaluation of acrylamide toxicity on organisms with different levels of organisation and the comparability of results, and it examines the value of using a battery of low-cost standardised bioassays in the monitoring of pollution and contamination of aquatic ecosystems. These results showed that EC50 values were lower for Desmodesmus subspicatus and Pseudokirchneriella subcapitata than for Daphnia magna and Lemna minor, which suggests an increased sensitivity of algae to acrylamide. According to the toxic unit approach, the values estimated by the Lemna minor and Daphnia magna bioassays, classify acrylamide as slightly toxic (TU=0-1; Class 1). The results obtained from algal bioassays (Desmodesmus subspicatus and Pseudokirchneriella subcapitata) revealed the toxic effect of acrylamide (TU=1-10; Class 2) on these organisms.

  9. Analyses of 1999 PM Data for the PM NAAQS Review

    EPA Pesticide Factsheets

    These files document all analyses conducted in association with the EPA memorandum from Terence Fitz-Simons, Scott Mathias, and Mike Rizzo titled Analyses of 1999 PM Data for the PM NAAQS Review, November 17, 2000.

  10. Statins attenuate the development of atherosclerosis and endothelial dysfunction induced by exposure to urban particulate matter (PM{sub 10})

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Miyata, Ryohei; Hiraiwa, Kunihiko; Cheng, Jui Chih

    Exposure to ambient air particulate matter (particles less than 10 μm or PM{sub 10}) has been shown to be an independent risk factor for the development and progression of atherosclerosis. The 3-hydroxy-3-methylglutaryl coenzyme A reductase inhibitors (statins) have well-established anti-inflammatory properties. The aim of this study was to determine the impact of statins on the adverse functional and morphological changes in blood vessels induced by PM{sub 10}. New Zealand White rabbits fed with a high fat diet were subjected to balloon injury to their abdominal aorta followed by PM{sub 10}/saline exposure for 4 weeks ± lovastatin (5 mg/kg/day) treatment. PM{submore » 10} exposure accelerated balloon catheter induced plaque formation and increased intimal macrophages and lipid accumulation while lovastatin attenuated these changes and promoted smooth muscle cell recruitment into plaques. PM{sub 10} impaired vascular acetylcholine (Ach) responses and increased vasoconstriction induced by phenylephrine as assessed by wire myograph. Supplementation of nitric oxide improved the impaired Ach responses. PM{sub 10} increased the expression of inducible nitric oxide synthase (iNOS) and cyclooxygenase-2 (COX-2) in blood vessels and increased the plasma levels of endothelin-1 (ET-1). Incubation with specific inhibitors for iNOS, COX-2 or ET-1 in the myograph chambers significantly improved the impaired vascular function. Lovastatin decreased the expression of these mediators in atherosclerotic lesions and improved endothelial dysfunction. However, lovastatin was unable to reduce blood lipid levels to the baseline level in rabbits exposed to PM{sub 10}. Taken together, statins protect against PM{sub 10}-induced cardiovascular disease by reducing atherosclerosis and improving endothelial function via their anti-inflammatory properties. - Highlights: • Coarse particulate matter (PM{sub 10}) accelerated balloon injury-induced plaque formation. • Lovastatin decreased

  11. Estimating PM2.5 speciation concentrations using prototype 4.4 km-resolution MISR aerosol properties over Southern California

    NASA Astrophysics Data System (ADS)

    Meng, Xia; Garay, Michael J.; Diner, David J.; Kalashnikova, Olga V.; Xu, Jin; Liu, Yang

    2018-05-01

    Research efforts to better characterize the differential toxicity of PM2.5 (particles with aerodynamic diameters less than or equal to 2.5 μm) speciation are often hindered by the sparse or non-existent coverage of ground monitors. The Multi-angle Imaging SpectroRadiometer (MISR) aboard NASA's Terra satellite is one of few satellite aerosol sensors providing information of aerosol shape, size and extinction globally for a long and continuous period that can be used to estimate PM2.5 speciation concentrations since year 2000. Currently, MISR only provides a 17.6 km product for its entire mission with global coverage every 9 days, a bit too coarse for air pollution health effects research and to capture local spatial variability of PM2.5 speciation. In this study, generalized additive models (GAMs) were developed using MISR prototype 4.4 km-resolution aerosol data with meteorological variables and geographical indicators, to predict ground-level concentrations of PM2.5 sulfate, nitrate, organic carbon (OC) and elemental carbon (EC) in Southern California between 2001 and 2015 at the daily level. The GAMs are able to explain 66%, 62%, 55% and 58% of the daily variability in PM2.5 sulfate, nitrate, OC and EC concentrations during the whole study period, respectively. Predicted concentrations capture large regional patterns as well as fine gradients of the four PM2.5 species in urban areas of Los Angeles and other counties, as well as in the Central Valley. This study is the first attempt to use MISR prototype 4.4 km-resolution AOD (aerosol optical depth) components data to predict PM2.5 sulfate, nitrate, OC and EC concentrations at the sub-regional scale. In spite of its low temporal sampling frequency, our analysis suggests that the MISR 4.4 km fractional AODs provide a promising way to capture the spatial hotspots and long-term temporal trends of PM2.5 speciation, understand the effectiveness of air quality controls, and allow our estimated PM2.5 speciation data to

  12. Relative entropy and optimization-driven coarse-graining methods in VOTCA

    DOE PAGES

    Mashayak, S. Y.; Jochum, Mara N.; Koschke, Konstantin; ...

    2015-07-20

    We discuss recent advances of the VOTCA package for systematic coarse-graining. Two methods have been implemented, namely the downhill simplex optimization and the relative entropy minimization. We illustrate the new methods by coarse-graining SPC/E bulk water and more complex water-methanol mixture systems. The CG potentials obtained from both methods are then evaluated by comparing the pair distributions from the coarse-grained to the reference atomistic simulations.We have also added a parallel analysis framework to improve the computational efficiency of the coarse-graining process.

  13. Coarse-Grained and Atomistic Modeling of Polyimides

    NASA Technical Reports Server (NTRS)

    Clancy, Thomas C.; Hinkley, Jeffrey A.

    2004-01-01

    A coarse-grained model for a set of three polyimide isomers is developed. Each polyimide is comprised of BPDA (3,3,4,4' - biphenyltetracarboxylic dianhydride) and one of three APB isomers: 1,3-bis(4-aminophenoxy)benzene, 1,4-bis(4-aminophenoxy)benzene or 1,3-bis(3-aminophenoxy)benzene. The coarse-grained model is constructed as a series of linked vectors following the contour of the polymer backbone. Beads located at the midpoint of each vector define centers for long range interaction energy between monomer subunits. A bulk simulation of each coarse-grained polyimide model is performed with a dynamic Monte Carlo procedure. These coarsegrained models are then reverse-mapped to fully atomistic models. The coarse-grained models show the expected trends in decreasing chain dimensions with increasing meta linkage in the APB section of the repeat unit, although these differences were minor due to the relatively short chains simulated here. Considerable differences are seen among the dynamic Monte Carlo properties of the three polyimide isomers. Decreasing relaxation times are seen with increasing meta linkage in the APB section of the repeat unit.

  14. A multivariate study for characterizing particulate matter (PM(10), PM(2.5), and PM(1)) in Seoul metropolitan subway stations, Korea.

    PubMed

    Kwon, Soon-Bark; Jeong, Wootae; Park, Duckshin; Kim, Ki-Tae; Cho, Kyung Hwa

    2015-10-30

    Given that around eight million commuters use the Seoul Metropolitan Subway (SMS) each day, the indoor air quality (IAQ) of its stations has attracted much public attention. We have monitored the concentration of particulate matters (PMx) (i.e., PM10, PM2.5, and PM1) in six major transfer stations per minute for three weeks during the summer, autumn, and winter in 2014 and 2015. The data were analyzed to investigate the relationship between PMx concentration and multivariate environmental factors using statistical methods. The average PM concentration observed was approximately two or three times higher than outdoor PM10 concentration, showing similar temporal patterns at concourses and platforms. This implies that outdoor PM10 is the most significant factor in controlling indoor PM concentration. In addition, the station depth and number of trains passing through stations were found to be additional influences on PMx. Principal component analysis (PCA) and self-organizing map (SOM) were employed, through which we found that the number of trains influences PM concentration in the vicinity of platforms only, and PMx hotspots were determined. This study identifies the external and internal factors affecting PMx characteristics in six SMS stations, which can assist in the development of effective IAQ management plans to improve public health. Copyright © 2015 Elsevier B.V. All rights reserved.

  15. Draft Analyses of PM Data for the PM NAAQS Review

    EPA Pesticide Factsheets

    These files document all analyses conducted in association with the EPA memorandum from Mark Schmidt, David Mintz, Tesh Rao, and Lance McCluney titled Draft Analyses of PM Data for the PM NAAQS Review, January 31, 2005.

  16. Long-Term Coarse Particulate Matter Exposure and Heart Rate Variability in the Multi-Ethnic Study of Atherosclerosis (MESA)

    PubMed Central

    Adhikari, Richa; D’Souza, Jennifer; Solimon, Elsayed Z.; Burke, Gregory L.; Daviglus, Martha; Jacobs, David R.; Park, Sung Kyun; Sheppard, Lianne; Thorne, Peter S.; Kaufman, Joel D.; Larson, Timothy V.; Adar, Sara D.

    2017-01-01

    Background Reduced heart rate variability, a marker of impaired cardiac autonomic function, has been linked to short-term exposure to airborne particles. This research adds to the literature by examining associations with long-term exposures to coarse particles (PM10-2.5). Methods Using electrocardiogram recordings from 2,780 participants (45-84 years) from three Multi-Ethnic Study of Atherosclerosis sites, we assessed the standard deviation of normal-to-normal intervals (SDNN) and root-mean square differences of successive normal-to-normal intervals (rMSSD) at a baseline (2000-2002) and follow-up (2010-2012) examination (mean visits/person=1.5). Annual average concentrations of PM10-2.5 mass, copper, zinc, phosphorus, silicon, and endotoxin were estimated using site-specific spatial prediction models. We assessed associations for baseline heart rate variability and rate of change in heart rate variability over time using multivariable mixed models adjusted for time, sociodemographic, lifestyle, health, and neighborhood confounders, including co-pollutants. Results In our primary models adjusted for demographic and lifestyle factors and site, PM10-2.5 mass was associated with 1.0% (95% CI: -4.1, 2.1%) lower SDNN levels per interquartile range of 2 μg/m3. Stronger associations, however, were observed prior to site adjustment and with increasing residential stablity. Similar patterns were found for rMSSD. We found little evidence for associations with other chemical species and with with the rate of change in heart rate variability, though endotoxin was associated with increasing heart rate variability over time. Conclusion We found only weak evidence that long-term PM10-2.5 exposures are associated with lowered heart rate variability. Stronger associations among residentially stable individuals suggest that confirmatory studies are needed. PMID:27035690

  17. Assessing the ecological risk of soil irrigated with wastewater using in vitro cell bioassays.

    PubMed

    Yu, Guo; Xiao, Ruiyang; Wang, Donghong; Zhou, Jun; Wang, Zijian

    2008-12-01

    In the most recent research work, the accumulation of toxicants in soil was always assessed through concentration level of the target contaminants. However, assessments based on chemical analysis were limited in numbers and in their unpredictable bioavailability. An alternative assessment could be based on toxicity assessment. It means that a screening bioassay is a necessary tool for identifying and defining contaminants at the sites, which should warrant further attention. In the present study, three in vitro cell bioassays, including the SOS/umu bioassay for genotoxic effects, human estrogen receptor recombinant yeast bioassay for estrogenic effects, and ethoxyresorfin O-deethylase (EROD) with H4IIE rat hepatoma cells bioassay for Ah-receptor agonistic effects, were used for the evaluation of the accumulation of toxicants in soils irrigated with wastewater in the suburb of Beijing, China. The results indicated that there were significant increases of genotoxic, estrogenic, and Ah-receptor agonistic effects in soils irrigated with wastewater, as compared with soils irrigated with groundwater. There was the decreased effect gradient following the increase of the distances from the inlet of the wastewater. It was concluded that wastewater irrigation could cause accumulation of genotoxic, estrogenic, and Ah-receptor agonistic chemicals in soil.

  18. Physicochemical characteristics and occupational exposure to coarse, fine and ultrafine particles during building refurbishment activities

    NASA Astrophysics Data System (ADS)

    Azarmi, Farhad; Kumar, Prashant; Mulheron, Mike; Colaux, Julien L.; Jeynes, Chris; Adhami, Siavash; Watts, John F.

    2015-08-01

    Understanding of the emissions of coarse (PM10 ≤10 μm), fine (PM2.5 ≤2.5 μm) and ultrafine particles (UFP <100 nm) from refurbishment activities and their dispersion into the nearby environment is of primary importance for developing efficient risk assessment and management strategies in the construction and demolition industry. This study investigates the release, occupational exposure and physicochemical properties of particulate matter, including UFPs, from over 20 different refurbishment activities occurring at an operational building site. Particles were measured in the 5-10,000-nm-size range using a fast response differential mobility spectrometer and a GRIMM particle spectrometer for 55 h over 8 days. The UFPs were found to account for >90 % of the total particle number concentrations and <10 % of the total mass concentrations released during the recorded activities. The highest UFP concentrations were 4860, 740, 650 and 500 times above the background value during wall-chasing, drilling, cementing and general demolition activities, respectively. Scanning electron microscopy, X-ray photoelectron spectroscopy and ion beam analysis were used to identify physicochemical characteristics of particles and attribute them to probable sources considering the size and the nature of the particles. The results confirm that refurbishment activities produce significant levels (both number and mass) of airborne particles, indicating a need to develop appropriate regulations for the control of occupational exposure of operatives undertaking building refurbishment.

  19. A modeling study of coarse particulate matter pollution in Beijing: regional source contributions and control implications for the 2008 summer Olympics

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Litao Wang; Jiming Hao; Kebin He

    In the last 10 yr, Beijing has made a great effort to improve its air quality. However, it is still suffering from regional coarse particulate matter (PM10) pollution that could be a challenge to the promise of clean air during the 2008 Olympics. To provide scientific guidance on regional air pollution control, the Mesoscale Modeling System Generation 5 (MM5) and the Models-3/Community Multiscale Air Quality Model (CMAQ) air quality modeling system was used to investigate the contributions of emission sources outside the Beijing area to pollution levels in Beijing. The contributions to the PM10 concentrations in Beijing were assessed formore » the following sources: power plants, industry, domestic sources, transportation, agriculture, and biomass open burning. In January, it is estimated that on average 22% of the PM10 concentrations can be attributed to outside sources, of which domestic and industrial sources contributed 37 and 31%, respectively. In August, as much as 40% of the PM10 concentrations came from regional sources, of which approximately 41% came from industry and 31% from power plants. However, the synchronous analysis of the hourly concentrations, regional contributions, and wind vectors indicates that in the heaviest pollution periods the local emission sources play a more important role. The implications are that long-term control strategies should be based on regional-scale collaborations, and that emission abatement of local sources may be more effective in lowering the PM10 concentration levels on the heavy pollution days. Better air quality can be attained during the Olympics by placing effective emission controls on the local sources in Beijing and by controlling emissions from industry and power plants in the surrounding regions. 44 refs., 6 figs., 3 tabs.« less

  20. Indoor air quality modeling for PM 10, PM 2.5, and PM 1.0 in naturally ventilated classrooms of an urban Indian school building.

    PubMed

    Goyal, Radha; Khare, Mukesh

    2011-05-01

    Assessment of indoor air quality (IAQ) in classrooms of school buildings is of prime concern due to its potential effects on student's health and performance as they spend a substantial amount of their time (6-7 h per day) in schools. A number of airborne contaminants may be present in urban school environment. However, respirable suspended particulate matter (RSPM) is of great significance as they may significantly affect occupants' health. The objectives of the present study are twofold, one, to measure the concentrations of PM(10) (<10 microm), PM(2.5) (<2.5 microm), and PM(1.0) (<1.0 microm) in naturally ventilated classrooms of a school building located near a heavy-traffic roadway (9,755 and 4,296 vehicles/hour during weekdays and weekends, respectively); and second, to develop single compartment mass balance-based IAQ models for PM(10) (NVIAQM(pm10)), PM(2.5) (NVIAQM(pm2.5)), and PM(1.0) (NVIAQM(pm1.0)) for predicting their indoor concentrations. Outdoor RSPM levels and classroom characteristics, such as size, occupancy level, temperature, relative humidity, and CO(2) concentrations have also been monitored during school hours. Predicted indoor PM(10) concentrations show poor correlations with observed indoor PM(10) concentrations (R (2) = 0.028 for weekdays, and 0.47 for weekends). However, a fair degree of agreement (d) has been found between observed and predicted concentrations, i.e., 0.42 for weekdays and 0.59 for weekends. Furthermore, NVIAQM(pm2.5) and NVIAQM(pm1.0) results show good correlations with observed concentrations of PM(2.5) (R(2) = 0.87 for weekdays and 0.9 for weekends) and PM(1.0) (R(2) = 0.86 for weekdays and 0.87 for weekends). NVIAQM(pm10) shows the tendency to underpredict indoor PM(10) concentrations during weekdays as it does not take into account the occupant's activities and its effects on the indoor concentrations during the class hours. Intense occupant's activities cause resuspension or delayed deposition of PM(10). The model

  1. CARDIOVASCULAR MORTALITY IN PHOENIX: PM1 IS A BETTER INDICATOR THAN PM2.5.

    EPA Science Inventory

    EPA has obtained a 3-year database of particulate matter (PM) in Phoenix, AZ from 1995 - 1997 that includes elemental analysis by XRF of daily PM2.5. During this time period PM1 and PM2.5 TEOMs were run simultaneously for about 7 months during two periods of the year. Regressio...

  2. Seasonal cycle and temperature dependence of pinene oxidation products, dicarboxylic acids and nitrophenols in fine and coarse air particulate matter

    NASA Astrophysics Data System (ADS)

    Zhang, Y. Y.; Müller, L.; Winterhalter, R.; Moortgat, G. K.; Hoffmann, T.; Pöschl, U.

    2010-08-01

    Filter samples of fine and coarse air particulate matter (PM) collected over a period of one year in central Europe (Mainz, Germany) were analyzed for water-soluble organic compounds (WSOCs), including the α- and β-pinene oxidation products pinic acid, pinonic acid and 3-methyl-1,2,3-butanetricarboxylic acid (3-MBTCA), as well as a variety of dicarboxylic acids and nitrophenols. Seasonal variations and other characteristic features in fine, coarse, and total PM (TSP) are discussed with regard to aerosol sources and sinks in comparison to data from other studies and regions. The ratios of adipic acid and phthalic acid to azelaic acid indicate that the investigated aerosol samples were mainly influenced by biogenic sources. A strong Arrhenius-type correlation was found between the 3-MBTCA concentration and inverse temperature (R2 = 0.79, n = 52, Ea = 126 ± 10 kJ mol-1, temperature range 275-300 K). Model calculations suggest that the temperature dependence observed for 3-MBTCA can be explained by enhanced photochemical production due to an increase of hydroxyl radical (OH) concentration with increasing temperature, whereas the influence of gas-particle partitioning appears to play a minor role. The results indicate that the OH-initiated oxidation of pinonic acid is the rate-limiting step in the formation of 3-MBTCA, and that 3-MBTCA may be a suitable tracer for the chemical aging of biogenic secondary organic aerosol (SOA) by OH radicals. An Arrhenius-type temperature dependence was also observed for the concentration of pinic acid (R2 = 0.60, n = 56, Ea = 84 ± 9 kJ mol-1); it can be tentatively explained by the temperature dependence of biogenic pinene emission as the rate-limiting step of pinic acid formation.

  3. Seasonal cycle and temperature dependence of pinene oxidation products, dicarboxylic acids and nitrophenols in fine and coarse air particulate matter

    NASA Astrophysics Data System (ADS)

    Zhang, Y.; Müller, L.; Winterhalter, R.; Moortgat, G. K.; Hoffmann, T.; Pöschl, U.

    2010-05-01

    Filter samples of fine and coarse air particulate matter (PM) collected over a period of one year in central Europe (Mainz, Germany) were analyzed for water-soluble organic compounds (WSOCs), including the α- and β-pinene oxidation products pinic acid, pinonic acid and 3-methyl-1,2,3-butanetricarboxylic acid (3-MBTCA), as well as a variety of dicarboxylic acids and nitrophenols. Seasonal variations and other characteristic features in fine, coarse, and total PM (TSP) are discussed with regard to aerosol sources and sinks in comparison to data from other studies and regions. The ratios of adipic acid and phthalic acid to azelaic acid indicate that the investigated samples were mainly influenced by biogenic sources. A strong Arrhenius-type correlation was found between the 3-MBTCA concentration and inverse temperature (R2=0.79, n=52, Ea=126±10 kJ mol-1, temperature range 275-300 K). Model calculations suggest that the temperature dependence observed for 3-MBTCA can be explained by enhanced photochemical production due to an increase of hydroxyl radical (OH) concentration with increasing temperature, whereas the influence of gas-particle partitioning appears to play a minor role. The results indicate that the OH-initiated oxidation of pinonic acid is the rate-limiting step in the formation of 3-MBTCA, and that 3-MBTCA may be a suitable tracer for the chemical aging of biogenic secondary organic aerosol (SOA) by OH radicals. An Arrhenius-type temperature dependence was also observed for the concentration of pinic acid (R2=0.60, n=56, Ea=84±9 kJ mol-1); it can be tentatively explained by the temperature dependence of biogenic pinene emission as the rate-limiting step of pinic acid formation.

  4. Bioassay of safinamide in biological fluids of humans and various animal species.

    PubMed

    Dal Bo, Lorenzo; Mazzucchelli, Paolo; Fibbioli, Monia; Marzo, Antonio

    2006-01-01

    This paper describes three methods to bioassay safinamide (CAS 133865-89-1) in biological fluids of humans and laboratory animals for pharmacokinetic, toxicokinetic and bioavailability studies. Two methods profited from liquid chromatography tandem mass spectrometry (LC-MS-MS) system, one (micro bioassay) working in the low dynamic range 0.5-20 ng/ml, the other in the range 20-6000 ng/ml. A third method used high-performance liquid chromatrography with fluorimetric detection (HPLC-FD), working in the dynamic range 20-1000 ng/ml. All the three methods were validated in compliance with the accreditated views on analytical bioassays. The shorter run time (5.5 min vs 16 min) has led the authors to prefer the two LC-MS-MS methods to the HPLC-FD bioassay, even if all the performances of the three methods were excellent. The methods described in this paper were and are still now extensively used to assay safinamide in more than 10,000 specimens of biological fluids from humans and laboratory animals in the development program of the drug. Main pharmacokinetic results obtained in various Phase I trials on healthy volunteers are briefly reported.

  5. Combined Use of Satellite Observations with Urban Surface Characteristics to Estimate PM Concentrations by Employing Mixed-Effects Models

    NASA Astrophysics Data System (ADS)

    Beloconi, Anton; Benas, Nikolaos; Chrysoulakis, Nektarios; Kamarianakis, Yiannis

    2015-11-01

    Linear mixed effects models were developed for the estimation of the average daily Particulate Matter (PM) concentration spatial distribution over the area of Greater London (UK). Both fine (PM2.5) and coarse (PM10) concentrations were predicted for the 2002- 2012 time period, based on satellite data. The latter included Aerosol Optical Thickness (AOT) at 3×3 km spatial resolution, as well as the Surface Relative Humidity, Surface Temperature and K-Index derived from MODIS (Moderate Resolution Imaging Spectroradiometer) sensor. For a meaningful interpretation of the association among these variables, all data were homogenized with regard to spatial support and geographic projection, thus addressing the change of support problem and leading to a valid statistical inference. To this end, spatial (2D) and spatio- temporal (3D) kriging techniques were applied to in-situ particulate matter concentrations and the leave-one- station-out cross-validation was performed on a daily level to gauge the quality of the predictions. Satellite- derived covariates displayed clear seasonal patterns; in order to work with data which is stationary in mean, for each covariate, deviations from its estimated annual profiles were computed using nonlinear least squares and nonlinear absolute deviations. High-resolution land- cover and morphology static datasets were additionally incorporated in the analysis in order to catch the effects of nearby emission sources and sequestration sites. For pairwise comparisons of the particulate matter concentration means at distinct land-cover classes, the pairwise comparisons method for unequal sample sizes, known as Tukey's method, was performed. The use of satellite-derived products allowed better assessment of space-time interactions of PM, since these daily spatial measurements were able to capture differences in PM concentrations between grid cells, while the use of high- resolution land-cover and morphology static datasets allowed accounting for

  6. Size distribution of chemical elements and their source apportionment in ambient coarse, fine, and ultrafine particles in Shanghai urban summer atmosphere.

    PubMed

    Lü, Senlin; Zhang, Rui; Yao, Zhenkun; Yi, Fei; Ren, Jingjing; Wu, Minghong; Feng, Man; Wang, Qingyue

    2012-01-01

    Ambient coarse particles (diameter 1.8-10 microm), fine particles (diameter 0.1-1.8 microm), and ultrafine particles (diameter < 0.1 microm) in the atmosphere of the city of Shanghai were sampled during the summer of 2008 (from Aug 27 to Sep 08). Microscopic characterization of the particles was investigated by scanning electron microscopy coupled with energy dispersive X-ray spectroscopy (SEM/EDX). Mass concentrations of Si, P, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, As, Se, Br, Rb, Sr, and Pb in the size-resolved particles were quantified by using synchrotron radiation X-ray fluorescence (SRXRF). Source apportionment of the chemical elements was analyzed by means of an enrichment factor method. Our results showed that the average mass concentrations of coarse particles, fine particles and ultrafine particles in the summer air were 9.38 +/- 2.18, 8.82 +/- 3.52, and 2.02 +/- 0.41 microg/m3, respectively. The mass percentage of the fine particles accounted for 51.47% in the total mass of PM10, indicating that fine particles are the major component in the Shanghai ambient particles. SEM/EDX results showed that the coarse particles were dominated by minerals, fine particles by soot aggregates and fly ashes, and ultrafine particles by soot particles and unidentified particles. SRXRF results demonstrated that crustal elements were mainly distributed in the coarse particles, while heavy metals were in higher proportions in the fine particles. Source apportionment revealed that Si, K, Ca, Fe, Mn, Rb, and Sr were from crustal sources, and S, Cl, Cu, Zn, As, Se, Br, and Pb from anthropogenic sources. Levels of P, V, Cr, and Ni in particles might be contributed from multi-sources, and need further investigation.

  7. The 10th Annual Bioassays and Bioanalytical Method Development Conference.

    PubMed

    Ma, Mark; Tudan, Christopher; Koltchev, Dolly

    2015-01-01

    The 10th Annual Bioassays and Bioanalytical Method Development Conference was hosted in Boston, MA, USA on 20-22 October 2014. This meeting brought together scientists from the biopharmaceutical and life sciences industries, the regulatory agency and academia to share and discuss current trends in cell-based assays and bioanalysis, challenges and ideas for the future of the bioassays and bioanalytical method development. The experiences associated with new and innovative technologies were evaluated as well as their impact on the current bioassays methodologies and bioanalysis workflow, including quality, feasibility, outsourcing strategies and challenges, productivity and compliance. Several presentations were also provided by members of the US FDA, sharing both scientific and regulatory paradigms including a most recent update on the position of the FDA with specific aspects of the draft Bioanalytical Method Validation guidance following its review of the industry's responses. The meeting was jointly coincided with the 15th Annual Immunogenicity for Biotherapeutics meeting, allowing for attendees to also familiarize themselves with new and emerging approaches to overcome the effect of immunogenicity, in addition to investigative strategies.

  8. Oxidative potential of coarse particulate matter (PM10–2.5) and its relation to water solubility and sources of trace elements and metals in the Los Angeles Basin

    PubMed Central

    Shirmohammadi, Farimah; Hasheminassab, Sina; Wang, Dongbin; Saffari, Arian; Schauer, James J.; Shafer, Martin M.; Delfino, Ralph J.; Sioutas, Constantinos

    2015-01-01

    In this study, potential sources of water-soluble (WS) and water-insoluble (WI) fractions of metals and trace elements in coarse particulate matter (CPM) (PM10–2.5, 2.5

  9. Assessment of Population Exposure to Coarse and Fine Particulate Matter in the Urban Areas of Chennai, India.

    PubMed

    Prasannavenkatesh, Ramachandran; Andimuthu, Ramachandran; Kandasamy, Palanivelu; Rajadurai, Geetha; Kumar, Divya Subash; Radhapriya, Parthasarathy; Ponnusamy, Malini

    2015-01-01

    Research outcomes from the epidemiological studies have found that the course (PM10) and the fine particulate matter (PM2.5) are mainly responsible for various respiratory health effects for humans. The population-weighted exposure assessment is used as a vital decision-making tool to analyze the vulnerable areas where the population is exposed to critical concentrations of pollutants. Systemic sampling was carried out at strategic locations of Chennai to estimate the various concentration levels of particulate pollution during November 2013-January 2014. The concentration of the pollutants was classified based on the World Health Organization interim target (IT) guidelines. Using geospatial information systems the pollution and the high-resolution population data were interpolated to study the extent of the pollutants at the urban scale. The results show that approximately 28% of the population resides in vulnerable locations where the coarse particulate matter exceeds the prescribed standards. Alarmingly, the results of the analysis of fine particulates show that about 94% of the inhabitants live in critical areas where the concentration of the fine particulates exceeds the IT guidelines. Results based on human exposure analysis show the vulnerability is more towards the zones which are surrounded by prominent sources of pollution.

  10. Assessment of Population Exposure to Coarse and Fine Particulate Matter in the Urban Areas of Chennai, India

    PubMed Central

    Prasannavenkatesh, Ramachandran; Andimuthu, Ramachandran; Kandasamy, Palanivelu; Rajadurai, Geetha; Subash Kumar, Divya; Radhapriya, Parthasarathy; Ponnusamy, Malini

    2015-01-01

    Research outcomes from the epidemiological studies have found that the course (PM10) and the fine particulate matter (PM2.5) are mainly responsible for various respiratory health effects for humans. The population-weighted exposure assessment is used as a vital decision-making tool to analyze the vulnerable areas where the population is exposed to critical concentrations of pollutants. Systemic sampling was carried out at strategic locations of Chennai to estimate the various concentration levels of particulate pollution during November 2013–January 2014. The concentration of the pollutants was classified based on the World Health Organization interim target (IT) guidelines. Using geospatial information systems the pollution and the high-resolution population data were interpolated to study the extent of the pollutants at the urban scale. The results show that approximately 28% of the population resides in vulnerable locations where the coarse particulate matter exceeds the prescribed standards. Alarmingly, the results of the analysis of fine particulates show that about 94% of the inhabitants live in critical areas where the concentration of the fine particulates exceeds the IT guidelines. Results based on human exposure analysis show the vulnerability is more towards the zones which are surrounded by prominent sources of pollution. PMID:26258167

  11. PM 10, PM 2.5 and PM 1.0—Emissions from industrial plants—Results from measurement programmes in Germany

    NASA Astrophysics Data System (ADS)

    Ehrlich, C.; Noll, G.; Kalkoff, W.-D.; Baumbach, G.; Dreiseidler, A.

    Emission measurement programmes were carried out at industrial plants in several regions of Germany to determine the fine dust in the waste gases; the PM 10, PM 2.5 and PM 1.0 fractions were sampled using a cascade impactor technique. The installations tested included plants used for: combustion (brown coal, heavy fuel oil, wood), cement production, glass production, asphalt mixing, and processing plants for natural stones and sand, ceramics, metallurgy, chemical production, spray painting, wood processing/chip drying, poultry farming and waste treatment. In addition waste gas samples were taken from small-scale combustion units, like domestic stoves, firing lignite briquettes or wood. In total 303 individual measurement results were obtained during 106 different measurement campaigns. In the study it was found that in more than 70% of the individual emission measurement results from industrial plants and domestic stoves the PM 10 portion amounted to more than 90% and the PM 2.5 portion between 50% and 90% of the total PM (particulate matter) emission. For thermal industrial processes the PM 1.0 portion constituted between 20% and 60% of the total PM emission. Typical particle size distributions for different processes were presented as cumulative frequency distributions and as frequency distributions. The particle size distributions determined for the different plant types show interesting similarities and differences depending on whether the processes are thermal, mechanical, chemical or mixed. Consequently, for the groups of plant investigated, a major finding of this study has been that the particle size distribution is a characteristic of the industrial process. Attempts to correlate particle size distributions of different plants to different gas cleaning technologies did not lead to usable results.

  12. Risk assessment for selected xenobiotics by bioassay methods with higher plants

    NASA Astrophysics Data System (ADS)

    Günther, Petra; Pestemer, Wilfried

    1990-05-01

    Different bioassays with higher plants were approved for use in a bioassay procedure for testing of xenobiotics according to the German Chemicals Act. Selected environmental pollutants (atrazine, cadmium chloride, 2,6-dichlorobenzonitrile, pentachlorophenol, potassium dichromate, thiourea), all from a list of reference chemicals, were tested with these methods. Dose-response curves for growth of oats and turnips were evaluated in soil and vermiculite (nonsorptive substrate), and availability to plants was calculated by comparing the EC50 values for one chemical in both substrates. The most active chemical was atrazine, followed by 2,6-dichlorobenzonitrile, pentachlorophenol, potassium dichromate, cadmium chloride, and thiourea. The least available compound to plants was pentachlorophenol, tested with turnips ( Brassica rapa var. rapa). The strongest inhibition of germination, demonstrated in an in vitro assay with garden cress ( Lepidium sativum), was found with 2,6-dichlorobenzonitrile, the lowest with atrazine. The effect of an extended exposure of the plants to the chemicals was evaluated in a long-term bioassay with oats ( Avena sativa) in hydroponic culture. Several dose-response curves during the growing period were derived. It was found that the EC50 values for atrazine and thiourea decreased markedly during the first four weeks; thereafter the changes were much smaller. As an overall conclusion, a bioassay procedure is proposed that can be included in the graduated plan recommended by the German Chemicals Act.

  13. 40 CFR Table C-4 to Subpart C of... - Test Specifications for PM10, PM2.5 and PM10-2.5 Candidate Equivalent Methods

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 5 2011-07-01 2011-07-01 false Test Specifications for PM10, PM2.5 and PM10-2.5 Candidate Equivalent Methods C Table C-4 to Subpart C of Part 53 Protection of Environment... Pt. 53, Subpt. C, Table C-4 Table C-4 to Subpart C of Part 53—Test Specifications for PM10, PM2.5 and...

  14. 40 CFR Table C-4 to Subpart C of... - Test Specifications for PM10, PM2.5 and PM10-2.5 Candidate Equivalent Methods

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 6 2012-07-01 2012-07-01 false Test Specifications for PM10, PM2.5 and PM10-2.5 Candidate Equivalent Methods C Table C-4 to Subpart C of Part 53 Protection of Environment... Pt. 53, Subpt. C, Table C-4 Table C-4 to Subpart C of Part 53—Test Specifications for PM10, PM2.5 and...

  15. 40 CFR Table C-4 to Subpart C of... - Test Specifications for PM10, PM2.5 and PM10-2.5 Candidate Equivalent Methods

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 5 2010-07-01 2010-07-01 false Test Specifications for PM10, PM2.5 and PM10-2.5 Candidate Equivalent Methods C Table C-4 to Subpart C of Part 53 Protection of Environment... Pt. 53, Subpt. C, Table C-4 Table C-4 to Subpart C of Part 53—Test Specifications for PM10, PM2.5 and...

  16. 9 CFR 147.16 - Procedure for the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment).

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... mycoplasma reactors by in vivo bio-assay (enrichment). 147.16 Section 147.16 Animals and Animal Products... the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment). This procedure has been shown... publications: (a) Bigland, C. H. and A. J. DaMassa, “A Bio-Assay for Mycoplasma Gallisepticum.” In: United...

  17. 9 CFR 147.16 - Procedure for the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment).

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... mycoplasma reactors by in vivo bio-assay (enrichment). 147.16 Section 147.16 Animals and Animal Products... the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment). This procedure has been shown... publications: (a) Bigland, C. H. and A. J. DaMassa, “A Bio-Assay for Mycoplasma Gallisepticum.” In: United...

  18. 9 CFR 147.16 - Procedure for the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment).

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... mycoplasma reactors by in vivo bio-assay (enrichment). 147.16 Section 147.16 Animals and Animal Products... the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment). This procedure has been shown... publications: (a) Bigland, C. H. and A. J. DaMassa, “A Bio-Assay for Mycoplasma Gallisepticum.” In: United...

  19. 9 CFR 147.16 - Procedure for the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment).

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... mycoplasma reactors by in vivo bio-assay (enrichment). 147.16 Section 147.16 Animals and Animal Products... the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment). This procedure has been shown... publications: (a) Bigland, C. H. and A. J. DaMassa, “A Bio-Assay for Mycoplasma Gallisepticum.” In: United...

  20. Indoor/outdoor relationships of quasi-ultrafine, accumulation and coarse mode particles in school environments in Barcelona: chemical composition and sources

    NASA Astrophysics Data System (ADS)

    Viana, M.; Rivas, I.; Querol, X.; Alastuey, A.; Sunyer, J.; Álvarez-Pedrerol, M.; Bouso, L.; Sioutas, C.

    2013-12-01

    The mass concentration, chemical composition and sources of quasi-ultrafine (quasi-UFP, PM0.25), accumulation (PM0.25-2.5) and coarse mode (PM2.5-10) particles were determined in indoor and outdoor air at 39 schools in Barcelona (Spain). Quasi-UFP mass concentrations measured (25.6 μg m-3 outdoors, 23.4 μg m-3 indoors) are significantly higher than those reported in other studies, and characterised by higher carbonaceous and mineral matter contents and a lower proportion of secondary inorganic ions. Results suggest that quasi-UFPs in Barcelona are affected by local sources in the schools, mainly human activity (e.g. organic material from textiles, etc.; contributing 23-46% to total quasi-UFP mass) and playgrounds (in the form of mineral matter, contributing about 9% to the quasi-UFP mass). The particle size distribution of toxicologically relevant metals and major aerosol components was characterised, displaying bimodal size distributions for most elements and components, and a unimodal distribution for inorganic salts (ammonium nitrate and sulphate) and elemental carbon (EC). Regarding metals, Ni and Cr were partitioned mainly in quasi-UFPs and could thus be of interest for epidemiological studies, given their high redox properties. Children exposure to quasi-UFP mass and chemical species was assessed by comparing the concentrations measured at urban background and traffic areas schools. Finally, three main indoor sources across all size fractions were identified by assessing indoor/outdoor ratios (I/O) of PM species used as their tracers: human activity (organic material), cleaning products, paints and plastics (Cl- source), and a metallic mixed source (comprising combinations of Cu, Zn, Co, Cd, Pb, As, V and Cr).

  1. Superporous agarose--reticulated vitreous carbon electrodes for electrochemical sandwich bioassays.

    PubMed

    Rao, Ashwin K; Creager, Stephen E

    2008-11-03

    We report on the use of flow-through electrodes fabricated from a composite of superporous agarose (SPA) and reticulated vitreous carbon (RVC) for carrying out sandwich bioassays via a model sandwich assay scheme. The flow-through design of the SPA-RVC electrodes allows for ease in solution handling with the use of micropipettors while allowing sandwich assays to be performed on the SPA matrix inside the RVC. A sandwich bioassay was devised for detecting biotinylated bovine serum albumin (b-BSA) as a proof-of-concept scheme to demonstrate applicability of SPA-RVC electrodes to carry out sandwich assays. In this bioassay scheme, SPA-RVC electrodes with avidin molecules immobilized on the SPA matrix were incubated with low quantities of b-BSA followed by incubation with avidinylated alkaline phosphatase (av-ALP). This construct creates a sandwich bioassay whereby b-BSA is sandwiched between the two avidin complexes. Av-ALP labels captured on the bound b-BSA catalytically hydrolyze conversion of 4-aminophenylphosphate (PAPP) to electrochemically active 4-aminophenol (PAP) which is then voltammetrically detected inside the RVC. The lower concentration detection limit for b-BSA was 0.32+/-0.1 ng mL(-1) and the absolute detection limit was 32+/-10 pg. Non-specific binding of av-ALP enzyme labels onto the avidin-activated SPA-RVC electrodes was low. Catalytic generation of PAP by non-specifically bound av-ALP occurs at a rate less than 2% of that for PAP generation by av-ALP in [(SPA-av)-(b-BSA-b)-(av-ALP)] sandwich constructs.

  2. MONITORING OF PARTICULATE MATTER OUTDOORS

    EPA Science Inventory

    Recent studies of the size and composition of atmospheric particulate matter (PM) have demonstrated the usefulness of separating atmospheric PM into its fine and coarse components. The need to measure the mass and composition of fine and coarse PM separately has been emphasized b...

  3. Patients with asthma demonstrate airway inflammation after exposure to concentrated ambient particulate matter

    EPA Science Inventory

    ..To the Editor"': Of the three major particulate matter (PM) size fractions (ultrafme, fine and coarse),coarse PM (PM2.5- 10) has been the least examined in terms of its health effects on susceptible populations, this despite having characteristics that make it particula...

  4. Bioassay-Directed Fractionation of Diesel and Biodiesel Emissions

    EPA Science Inventory

    Biofuels are being developed as alternatives to petroleum-derived products, but published research is contradictory regarding the mutagenic activity of such emissions relative to those from petroleum diesel. We performed bioassay-directed fractionation and analyzed the polycyclic...

  5. Global burden of mortalities due to chronic exposure to ambient PM2.5 from open combustion of domestic waste

    NASA Astrophysics Data System (ADS)

    Kodros, John K.; Wiedinmyer, Christine; Ford, Bonne; Cucinotta, Rachel; Gan, Ryan; Magzamen, Sheryl; Pierce, Jeffrey R.

    2016-12-01

    .5° results in 21% fewer mortalities attributed to waste-combustion PM2.5. Owing to coarse model resolution, our global estimates of premature mortality from waste-combustion PM2.5 are likely a lower bound.

  6. A rapid and inexpensive bioassay to evaluate the decontamination of organophosphates.

    PubMed

    Claborn, David M; Martin-Brown, Skylar A; Sagar, Sanjay Gupta; Durham, Paul

    2012-01-01

    An inexpensive and rapid bioassay using adult red flour beetles was developed for use in assessing the decontamination of environments containing organophosphates and related chemicals. A decontamination protocol was developed which demonstrated that 2 to 3 applications of 5% bleach solution were required to obtain nearly complete decontamination of malathion. The bioassay was also used to screen common household cleaners as potential decontaminating agents, but only 5% bleach was effective at improving survival of insects on steel plates treated with 25% malathion. A toxic degradation product (malaoxon) was detected using gas chromatography/mass spectrophotometry; this toxin affected the decontamination efficacy and resulted in continued toxicity to the beetles until subsequent decontaminations. The bioassay provides evidence to support the use of red flour beetles as a sensitive, less expensive method for determining safety levels of environments contaminated with malathion and other toxins, and may have application in the study of chemical warfare agents.

  7. Characterizing and contrasting instream and riparian coarse wood in western Montana basins

    Treesearch

    Michael K. Young; Ethan A. Mace; Eric T. Ziegler; Elaine K. Sutherland

    2006-01-01

    The importance of coarse wood to aquatic biota and stream channel structure is widely recognized, yet characterizations of large-scale patterns in coarse wood dimensions and loads are rare. To address these issues, we censused instream coarse wood ( 2 m long and 10 cm minimum diameter) and sampled riparian coarse wood and channel characteristics in and along 13 streams...

  8. Facile silicification of plastic surface for bioassays

    PubMed Central

    Hong, Seonki; Park, Ki Soo; Weissleder, Ralph; Castro, Cesar M.; Lee, Hakho

    2017-01-01

    We herein report a biomimetic technique to modify plastic substrates for bioassays. The method first places a polydopamine adhesion layer to plastic surface, and then grows conformal silica coating. As proof of principle, we coated plastic microbeads to construct a disposable filter for point-of-care nucleic acid extraction. PMID:28134385

  9. Coarse-graining errors and numerical optimization using a relative entropy framework

    NASA Astrophysics Data System (ADS)

    Chaimovich, Aviel; Shell, M. Scott

    2011-03-01

    The ability to generate accurate coarse-grained models from reference fully atomic (or otherwise "first-principles") ones has become an important component in modeling the behavior of complex molecular systems with large length and time scales. We recently proposed a novel coarse-graining approach based upon variational minimization of a configuration-space functional called the relative entropy, Srel, that measures the information lost upon coarse-graining. Here, we develop a broad theoretical framework for this methodology and numerical strategies for its use in practical coarse-graining settings. In particular, we show that the relative entropy offers tight control over the errors due to coarse-graining in arbitrary microscopic properties, and suggests a systematic approach to reducing them. We also describe fundamental connections between this optimization methodology and other coarse-graining strategies like inverse Monte Carlo, force matching, energy matching, and variational mean-field theory. We suggest several new numerical approaches to its minimization that provide new coarse-graining strategies. Finally, we demonstrate the application of these theoretical considerations and algorithms to a simple, instructive system and characterize convergence and errors within the relative entropy framework.

  10. Coarse-graining errors and numerical optimization using a relative entropy framework.

    PubMed

    Chaimovich, Aviel; Shell, M Scott

    2011-03-07

    The ability to generate accurate coarse-grained models from reference fully atomic (or otherwise "first-principles") ones has become an important component in modeling the behavior of complex molecular systems with large length and time scales. We recently proposed a novel coarse-graining approach based upon variational minimization of a configuration-space functional called the relative entropy, S(rel), that measures the information lost upon coarse-graining. Here, we develop a broad theoretical framework for this methodology and numerical strategies for its use in practical coarse-graining settings. In particular, we show that the relative entropy offers tight control over the errors due to coarse-graining in arbitrary microscopic properties, and suggests a systematic approach to reducing them. We also describe fundamental connections between this optimization methodology and other coarse-graining strategies like inverse Monte Carlo, force matching, energy matching, and variational mean-field theory. We suggest several new numerical approaches to its minimization that provide new coarse-graining strategies. Finally, we demonstrate the application of these theoretical considerations and algorithms to a simple, instructive system and characterize convergence and errors within the relative entropy framework. © 2011 American Institute of Physics.

  11. STOCK: Structure mapper and online coarse-graining kit for molecular simulations

    DOE PAGES

    Bevc, Staš; Junghans, Christoph; Praprotnik, Matej

    2015-03-15

    We present a web toolkit STructure mapper and Online Coarse-graining Kit for setting up coarse-grained molecular simulations. The kit consists of two tools: structure mapping and Boltzmann inversion tools. The aim of the first tool is to define a molecular mapping from high, e.g. all-atom, to low, i.e. coarse-grained, resolution. Using a graphical user interface it generates input files, which are compatible with standard coarse-graining packages, e.g. VOTCA and DL_CGMAP. Our second tool generates effective potentials for coarse-grained simulations preserving the structural properties, e.g. radial distribution functions, of the underlying higher resolution model. The required distribution functions can be providedmore » by any simulation package. Simulations are performed on a local machine and only the distributions are uploaded to the server. The applicability of the toolkit is validated by mapping atomistic pentane and polyalanine molecules to a coarse-grained representation. Effective potentials are derived for systems of TIP3P (transferable intermolecular potential 3 point) water molecules and salt solution. The presented coarse-graining web toolkit is available at http://stock.cmm.ki.si.« less

  12. Preliminary analysis of variability in concentration of fine particulate matter - PM1.0, PM2.5 and PM10 in area of Poznań city

    NASA Astrophysics Data System (ADS)

    Sówka, Izabela; Chlebowska-Styś, Anna; Mathews, Barbara

    2018-01-01

    It is commonly known, that suspended particulate matter pose a threat to human life and health, negatively influence the flora, climate and also materials. Especially dangerous is the presence of high concentration of particulate matter in the area of cities, where density of population is high. The research aimed at determining the variability of suspended particulate matter concentration (PM1.0, PM2.5 and PM10) in two different thermal seasons, in the area of Poznań city. As a part of carried out work we analyzed the variability of concentrations and also performed a preliminary analysis of their correlation. Measured concentrations of particulate matter were contained within following ranges: PM10 - 8.7-69.6 μg/m3, PM2.5 - 2.2-88.5 μg/m3, PM1.0 - 2.5-22.9 μg/m3 in the winter season and 1.0-42.8 μg/m3 (PM10), 1.2-40.3 μg/m3 (PM2.5) and 2.7-10.4 (PM1.0) in the summer season. Preliminary correlative analysis indicated interdependence between the temperature of air, the speed of wind and concentration of particulate matter in selected measurement points. The values of correlation coefficients between the air temperature, speed of wind and concentrations of particulate matter were respectively equal to: for PM10: -0.59 and -0.55 (Jana Pawła II Street), -0.53 and -0.53 (Szymanowskiego Street), for PM2.5: -0.60 and -0.53 (Jana Pawła II Street) and for PM1.0 -0.40 and -0.59 (Jana Pawła II Street).

  13. Spatiotemporal estimation of historical PM2.5 concentrations using PM10, meteorological variables, and spatial effect

    NASA Astrophysics Data System (ADS)

    Li, Lianfa; Wu, Anna H.; Cheng, Iona; Chen, Jiu-Chiuan; Wu, Jun

    2017-10-01

    Monitoring of fine particulate matter with diameter <2.5 μm (PM2.5) started from 1999 in the US and even later in many other countries. The lack of historical PM2.5 data limits epidemiological studies of long-term exposure of PM2.5 and health outcomes such as cancer. In this study, we aimed to design a flexible approach to reliably estimate historical PM2.5 concentrations by incorporating spatial effect and the measurements of existing co-pollutants such as particulate matter with diameter <10 μm (PM10) and meteorological variables. Monitoring data of PM10, PM2.5, and meteorological variables covering the entire state of California were obtained from 1999 through 2013. We developed a spatiotemporal model that quantified non-linear associations between PM2.5 concentrations and the following predictor variables: spatiotemporal factors (PM10 and meteorological variables), spatial factors (land-use patterns, traffic, elevation, distance to shorelines, and spatial autocorrelation), and season. Our model accounted for regional-(county) scale spatial autocorrelation, using spatial weight matrix, and local-scale spatiotemporal variability, using local covariates in additive non-linear model. The spatiotemporal model was evaluated, using leaving-one-site-month-out cross validation. Our final daily model had an R2 of 0.81, with PM10, meteorological variables, and spatial autocorrelation, explaining 55%, 10%, and 10% of the variance in PM2.5 concentrations, respectively. The model had a cross-validation R2 of 0.83 for monthly PM2.5 concentrations (N = 8170) and 0.79 for daily PM2.5 concentrations (N = 51,421) with few extreme values in prediction. Further, the incorporation of spatial effects reduced bias in predictions. Our approach achieved a cross validation R2 of 0.61 for the daily model when PM10 was replaced by total suspended particulate. Our model can robustly estimate historical PM2.5 concentrations in California when PM2.5 measurements were not available.

  14. Comparison of solid-phase bioassays and ecoscores to evaluate the toxicity of contaminated soils.

    PubMed

    Lors, Christine; Ponge, Jean-François; Martínez Aldaya, Maite; Damidot, Denis

    2010-08-01

    Five bioassays (inhibition of lettuce germination and growth, earthworm mortality, inhibition of springtail population growth, avoidance by springtails) were compared, using four coke factory soils contaminated by PAHs and trace elements, before and after biotreatment. For each bioassay, several endpoints were combined in an 'ecoscore', a measure of test sensitivity. Ecoscores pooled over all tested bioassays revealed that most organisms were highly sensitive to the concentration of 3-ring PAHs. When four soils were combined, behavioural tests using the springtail Folsomia candida showed higher ecoscores, i.e. they were most sensitive to soil contamination. However, despite overall higher sensitivity of behavioural tests, which could be used for cheap and rapid assessment of soil toxicity, especially at low levels of contamination, some test endpoints were more sensitive than others, and this may differ from a soil to another, pointing to the need for a battery of bioassays when more itemized results are expected. Copyright 2010 Elsevier Ltd. All rights reserved.

  15. Spatial and seasonal variation of particulate matter (PM10 and PM2.5) in Middle Eastern classrooms

    NASA Astrophysics Data System (ADS)

    Elbayoumi, Maher; Ramli, Nor Azam; Md Yusof, Noor Faizah Fitri; Al Madhoun, Wesam

    2013-12-01

    Monitoring of PM10 and PM2.5 particularly in school microenvironments is extremely important due to their impact on the global burden of disease. PM10 and PM2.5 levels were monitored inside and outside the classrooms of twelve naturally ventilated schools located in Gaza strip, Palestine. The measurements were carried out using hand held particulate matter instrument during fall, winter and spring seasons from October 2011 to May 2012. The average concentration of indoor PM10 was 349.49 (±196.57) μg m-3 and for PM2.5 was 103.96 (±84.96) μg m-3. The indoor/outdoor ratios for PM10 and PM2.5 were found to be much greater than 1.00 for all case study schools due to resuspension of deposited particles from the floors. Furthermore, strong correlations were found between indoor-outdoor PM10 and PM2.5. The variations of PM10 and PM2.5 concentrations were significant for the three seasons. During winter, the mean indoor PM10 was 1.30 and 2.50 times higher than fall and spring concentrations respectively. Meanwhile, PM2.5 concentration in winter was 3.00 times higher than fall and spring concentrations. In relation to spatial variation, the concentration of PM10 in the lower storey level was significantly higher than the classrooms located in the higher storey level.

  16. Coarse-grained hydrodynamics from correlation functions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Palmer, Bruce

    This paper will describe a formalism for using correlation functions between different grid cells as the basis for determining coarse-grained hydrodynamic equations for modeling the behavior of mesoscopic fluid systems. Configuration from a molecular dynamics simulation are projected onto basis functions representing grid cells in a continuum hydrodynamic simulation. Equilbrium correlation functions between different grid cells are evaluated from the molecular simulation and used to determine the evolution operator for the coarse-grained hydrodynamic system. The formalism is applied to some simple hydrodynamic cases to determine the feasibility of applying this to realistic nanoscale systems.

  17. Glucocorticoid activity detected by in vivo zebrafish assay and in vitro glucocorticoid receptor bioassay at environmental relevant concentrations.

    PubMed

    Chen, Qiyu; Jia, Ai; Snyder, Shane A; Gong, Zhiyuan; Lam, Siew Hong

    2016-02-01

    Glucocorticoids are pharmaceutical contaminants of emerging concern due to their incomplete removal during wastewater treatment, increased presence in aquatic environment and their biological potency. The zebrafish is a popular model for aquatic toxicology and environmental risk assessment. This study aimed to determine if glucocorticoids at environmental concentrations would perturb expression of selected glucocorticoid-responsive genes in zebrafish and to investigate their potentials as an in vivo zebrafish assay in complementing in vitro glucocorticoid receptor bioassay. The relative expression of eleven glucocorticoid-responsive genes in zebrafish larvae and liver of adult male zebrafish exposed to three representative glucocorticoids (dexamethasone, prednisolone and triamcinolone) was determined. The expression of pepck, baiap2 and pxr was up-regulated in zebrafish larvae and the expression of baiap2, pxr and mmp-2 was up-regulated in adult zebrafish exposed to glucocorticoids at concentrations equivalent to total glucocorticoids reported in environmental samples. The responsiveness of the specific genes were sufficiently robust in zebrafish larvae exposed to a complex environmental sample detected with in vitro glucocorticoid activity equivalent to 478 pM dexamethasone (DEX-EQ) and confirmed to contain low concentration (0.2 ng/L or less) of the targeted glucocorticoids, and possibly other glucocorticoid-active compounds. The findings provided in vivo relevance to the in vitro glucocorticoid activity and suggested that the environmental sample can perturb glucocorticoid-responsive genes in its original, or half the diluted, concentration as may be found in the environment. The study demonstrated the important complementary roles of in vivo zebrafish and in vitro bioassays coupled with analytical chemistry in monitoring environmental glucocorticoid contaminants. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Spatial distribution of particulate matter (PM10 and PM2.5) in Seoul Metropolitan Subway stations.

    PubMed

    Kim, Ki Youn; Kim, Yoon Shin; Roh, Young Man; Lee, Cheol Min; Kim, Chi Nyon

    2008-06-15

    The aims of this study are to examine the concentrations of PM10 and PM2.5 in areas within the Seoul Metropolitan Subway network and to provide fundamental data in order to protect respiratory health of subway workers and passengers from air pollutants. A total of 22 subway stations located on lines 1-4 were selected based on subway official's guidance. At these stations both subway worker areas (station offices, rest areas, ticket offices and driver compartments) and passengers areas (station precincts, subway carriages and platforms) were the sites used for measuring the levels of PM. The mean concentrations of PM10 and PM2.5 were relatively higher on platforms, inside subway carriages and in driver compartments than in the other areas monitored. The levels of PM10 and PM2.5 for station precincts and platforms exceeded the 24-h acceptable threshold limits of 150 microg/m3 for PM10 and 35 microg/m3 for PM2.5, which are regulated by the U.S. Environmental Protection Agency (EPA). However, levels measured in station and ticket offices fell below the respective threshold. The mean PM10 and PM2.5 concentrations on platforms located underground were significantly higher than those at ground level (p<0.05).

  19. Meteorological-gaseous influences on seasonal PM2.5 variability in the Klang Valley urban-industrial environment

    NASA Astrophysics Data System (ADS)

    Amil, N.; Latif, M. T.; Khan, M. F.; Mohamad, M.

    2015-09-01

    This study attempts to investigate the fine particulate matter (PM2.5) variability in the Klang Valley urban-industrial environment. In total, 94 daily PM2.5 samples were collected during a one-year campaign from August 2011 to July 2012, covering all four seasons. The samples were analysed for various inorganic components and black carbon. The chemical compositions were statistically analysed and the aerosol pattern was characterised using descriptive analysis, correlation matrices, enrichment factors (EF), stoichiometric analysis and chemical mass closure (CMC). For source apportionment purposes, a combination of positive matrix factorisation (PMF) and multi-linear regression (MLR) was employed. Further, meteorological-gaseous parameters were incorporated into each analysis for improved assessment. The results showed that PM2.5 mass averaged at 28 ± 18 μg m-3, 2.8 fold higher than the World Health Organisation (WHO) annual guideline. On a daily basis, the PM2.5 mass ranged between 6 and 118 μg m-3 with 43 % exceedance of the daily WHO guideline. The North-East monsoon (NE) was the only season with < 50 % sample exceedance of the daily WHO guideline. On an annual scale, PM2.5 mass correlated positively with temperature (T) and wind speed (WS) but negatively with relative humidity (RH). With the exception of NOx, the gases analysed (CO, NO2, NO and SO2) were found to significantly influence the PM2.5 mass. Seasonal variability unexpectedly showed that rainfall, WS and wind direction (WD) did not significantly correlate with PM2.5 mass. Further analysis on the PM2.5 / PM10, PM2.5 / TSP and PM10 / TSP ratios reveal that meteorological parameters only greatly influenced the coarse particles (PM > 2.5μm) and less so the fine particles at the site. Chemical composition showed that both primary and secondary pollutants of PM2.5 are equally important, albeit with seasonal variability. The CMC components identified were: black carbon (BC) > secondary inorganic aerosols

  20. Estimating Ground-Level PM(sub 2.5) Concentrations in the Southeastern United States Using MAIAC AOD Retrievals and a Two-Stage Model

    NASA Technical Reports Server (NTRS)

    Hu, Xuefei; Waller, Lance A.; Lyapustin, Alexei; Wang, Yujie; Al-Hamdan, Mohammad Z.; Crosson, William L.; Estes, Maurice G., Jr.; Estes, Sue M.; Quattrochi, Dale A.; Puttaswamy, Sweta Jinnagara; hide

    2013-01-01

    Previous studies showed that fine particulate matter (PM(sub 2.5), particles smaller than 2.5 micrometers in aerodynamic diameter) is associated with various health outcomes. Ground in situ measurements of PM(sub 2.5) concentrations are considered to be the gold standard, but are time-consuming and costly. Satellite-retrieved aerosol optical depth (AOD) products have the potential to supplement the ground monitoring networks to provide spatiotemporally-resolved PM(sub 2.5) exposure estimates. However, the coarse resolutions (e.g., 10 km) of the satellite AOD products used in previous studies make it very difficult to estimate urban-scale PM(sub 2.5) characteristics that are crucial to population-based PM(sub 2.5) health effects research. In this paper, a new aerosol product with 1 km spatial resolution derived by the Multi-Angle Implementation of Atmospheric Correction (MAIAC) algorithm was examined using a two-stage spatial statistical model with meteorological fields (e.g., wind speed) and land use parameters (e.g., forest cover, road length, elevation, and point emissions) as ancillary variables to estimate daily mean PM(sub 2.5) concentrations. The study area is the southeastern U.S., and data for 2003 were collected from various sources. A cross validation approach was implemented for model validation. We obtained R(sup 2) of 0.83, mean prediction error (MPE) of 1.89 micrograms/cu m, and square root of the mean squared prediction errors (RMSPE) of 2.73 micrograms/cu m in model fitting, and R(sup 2) of 0.67, MPE of 2.54 micrograms/cu m, and RMSPE of 3.88 micrograms/cu m in cross validation. Both model fitting and cross validation indicate a good fit between the dependent variable and predictor variables. The results showed that 1 km spatial resolution MAIAC AOD can be used to estimate PM(sub 2.5) concentrations.

  1. Resolving Dynamic Properties of Polymers through Coarse-Grained Computational Studies

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Salerno, K. Michael; Agrawal, Anupriya; Perahia, Dvora

    2016-02-05

    Coupled length and time scales determine the dynamic behavior of polymers and underlie their unique viscoelastic properties. To resolve the long-time dynamics it is imperative to determine which time and length scales must be correctly modeled. In this paper, we probe the degree of coarse graining required to simultaneously retain significant atomistic details and access large length and time scales. The degree of coarse graining in turn sets the minimum length scale instrumental in defining polymer properties and dynamics. Using linear polyethylene as a model system, we probe how the coarse-graining scale affects the measured dynamics. Iterative Boltzmann inversion ismore » used to derive coarse-grained potentials with 2–6 methylene groups per coarse-grained bead from a fully atomistic melt simulation. We show that atomistic detail is critical to capturing large-scale dynamics. Finally, using these models we simulate polyethylene melts for times over 500 μs to study the viscoelastic properties of well-entangled polymer melts.« less

  2. Chemical Characterisation of the Coarse and Fine Particulate Matter in the Environment of an Underground Railway System: Cytotoxic Effects and Oxidative Stress—A Preliminary Study

    PubMed Central

    Spagnolo, Anna Maria; Ottria, Gianluca; Perdelli, Fernanda; Cristina, Maria Luisa

    2015-01-01

    Background: Exposure to the particulate matter produced in underground railway systems is arousing increasing scientific interest because of its health effects. The aim of our study was to evaluate the airborne concentrations of PM10 and three sub-fractions of PM2.5 in an underground railway system environment in proximity to platforms and in underground commercial areas within the system, and to compare these with the outdoor airborne concentrations. We also evaluated the metal components, the cytotoxic properties of the various fractions of particulate matter (PM) and their capacity to induce oxidative stress. Method: We collected the coarse fraction (5–10 µm) and the fine fractions (1–2.5 µm; 0.5–1 µm; 0.25–0.5 µm). Chemical characterisation was determined by means of spectrometry. Cytotoxicity and oxidative stress were evaluated by 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay and Reactive Oxygen Species (ROS) assessment. Results: The concentrations of both PM10 and PM2.5 proved to be similar at the three sampling sites. Iron and other transition metals displayed a greater concentration at the subway platform than at the other two sites. The 2.5–10 µm and 1–2.5 µm fractions of PM from all three sampling sites determined a greater increase in ROS; the intensity of oxidative stress progressively declined as particle diameter diminished. Moreover, ROS concentrations were correlated with the concentrations of some transition metals, namely Mn, Cr, Ti, Fe, Cu, Zn, Ni and Mo. All particulate matter fractions displayed lower or similar ROS values between platform level and the outdoor air. Conclusions: The present study revealed that the underground railway environment at platform level, although containing higher concentrations of some particularly reactive metallic species, did not display higher cytotoxicity and oxidative stress levels than the outdoor air. PMID:25872016

  3. Chemical characterisation of the coarse and fine particulate matter in the environment of an underground railway system: cytotoxic effects and oxidative stress-a preliminary study.

    PubMed

    Spagnolo, Anna Maria; Ottria, Gianluca; Perdelli, Fernanda; Cristina, Maria Luisa

    2015-04-13

    Exposure to the particulate matter produced in underground railway systems is arousing increasing scientific interest because of its health effects. The aim of our study was to evaluate the airborne concentrations of PM10 and three sub-fractions of PM2.5 in an underground railway system environment in proximity to platforms and in underground commercial areas within the system, and to compare these with the outdoor airborne concentrations. We also evaluated the metal components, the cytotoxic properties of the various fractions of particulate matter (PM) and their capacity to induce oxidative stress. We collected the coarse fraction (5-10 µm) and the fine fractions (1-2.5 µm; 0.5-1 µm; 0.25-0.5 µm). Chemical characterisation was determined by means of spectrometry. Cytotoxicity and oxidative stress were evaluated by 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay and Reactive Oxygen Species (ROS) assessment. The concentrations of both PM10 and PM2.5 proved to be similar at the three sampling sites. Iron and other transition metals displayed a greater concentration at the subway platform than at the other two sites. The 2.5-10 µm and 1-2.5 µm fractions of PM from all three sampling sites determined a greater increase in ROS; the intensity of oxidative stress progressively declined as particle diameter diminished. Moreover, ROS concentrations were correlated with the concentrations of some transition metals, namely Mn, Cr, Ti, Fe, Cu, Zn, Ni and Mo. All particulate matter fractions displayed lower or similar ROS values between platform level and the outdoor air. The present study revealed that the underground railway environment at platform level, although containing higher concentrations of some particularly reactive metallic species, did not display higher cytotoxicity and oxidative stress levels than the outdoor air.

  4. Analyses of 2000-2002 PM Data for the PM NAAQS Review

    EPA Pesticide Factsheets

    These files document all analyses conducted in association with the EPA memorandum from Mark Schmidt, David Mintz, Tesh Rao, and Lance McCluney titled Analyses of 2000-2002 PM Data for the PM NAAQS Review, August 29, 2003.

  5. Source Apportionment and Elemental Composition of PM2.5 and PM10 in Jeddah City, Saudi Arabia.

    PubMed

    Khodeir, Mamdouh; Shamy, Magdy; Alghamdi, Mansour; Zhong, Mianhua; Sun, Hong; Costa, Max; Chen, Lung-Chi; Maciejczyk, Polina

    2012-07-01

    This paper presents the first comprehensive investigation of PM2.5 and PM10 composition and sources in Saudi Arabia. We conducted a multi-week multiple sites sampling campaign in Jeddah between June and September, 2011, and analyzed samples by XRF. The overall mean mass concentration was 28.4 ± 25.4 μg/m 3 for PM2.5 and 87.3 ± 47.3 μg/m 3 for PM10, with significant temporal and spatial variability. The average ratio of PM2.5/PM10 was 0.33. Chemical composition data were modeled using factor analysis with varimax orthogonal rotation to determine five and four particle source categories contributing significant amount of for PM2.5 and PM10 mass, respectively. In both PM2.5 and PM10 sources were (1) heavy oil combustion characterized by high Ni and V; (2) resuspended soil characterized by high concentrations of Ca, Fe, Al, and Si; and (3) marine aerosol. The two other sources in PM2.5 were (4) Cu/Zn source; (5) traffic source identified by presence of Pb, Br, and Se; while in PM10 it was a mixed industrial source. To estimate the mass contributions of each individual source category, the CAPs mass concentration was regressed against the factor scores. Cumulatively, resuspended soil and oil combustion contributed 77 and 82% mass of PM2.5 and PM10, respectively.

  6. Source Apportionment and Elemental Composition of PM2.5 and PM10 in Jeddah City, Saudi Arabia

    PubMed Central

    Khodeir, Mamdouh; Shamy, Magdy; Alghamdi, Mansour; Zhong, Mianhua; Sun, Hong; Costa, Max; Chen, Lung-Chi; Maciejczyk, Polina

    2014-01-01

    This paper presents the first comprehensive investigation of PM2.5 and PM10 composition and sources in Saudi Arabia. We conducted a multi-week multiple sites sampling campaign in Jeddah between June and September, 2011, and analyzed samples by XRF. The overall mean mass concentration was 28.4 ± 25.4 μg/m3 for PM2.5 and 87.3 ± 47.3 μg/m3 for PM10, with significant temporal and spatial variability. The average ratio of PM2.5/PM10 was 0.33. Chemical composition data were modeled using factor analysis with varimax orthogonal rotation to determine five and four particle source categories contributing significant amount of for PM2.5 and PM10 mass, respectively. In both PM2.5 and PM10 sources were (1) heavy oil combustion characterized by high Ni and V; (2) resuspended soil characterized by high concentrations of Ca, Fe, Al, and Si; and (3) marine aerosol. The two other sources in PM2.5 were (4) Cu/Zn source; (5) traffic source identified by presence of Pb, Br, and Se; while in PM10 it was a mixed industrial source. To estimate the mass contributions of each individual source category, the CAPs mass concentration was regressed against the factor scores. Cumulatively, resuspended soil and oil combustion contributed 77 and 82% mass of PM2.5 and PM10, respectively. PMID:24634602

  7. Theory of wavelet-based coarse-graining hierarchies for molecular dynamics.

    PubMed

    Rinderspacher, Berend Christopher; Bardhan, Jaydeep P; Ismail, Ahmed E

    2017-07-01

    We present a multiresolution approach to compressing the degrees of freedom and potentials associated with molecular dynamics, such as the bond potentials. The approach suggests a systematic way to accelerate large-scale molecular simulations with more than two levels of coarse graining, particularly applications of polymeric materials. In particular, we derive explicit models for (arbitrarily large) linear (homo)polymers and iterative methods to compute large-scale wavelet decompositions from fragment solutions. This approach does not require explicit preparation of atomistic-to-coarse-grained mappings, but instead uses the theory of diffusion wavelets for graph Laplacians to develop system-specific mappings. Our methodology leads to a hierarchy of system-specific coarse-grained degrees of freedom that provides a conceptually clear and mathematically rigorous framework for modeling chemical systems at relevant model scales. The approach is capable of automatically generating as many coarse-grained model scales as necessary, that is, to go beyond the two scales in conventional coarse-grained strategies; furthermore, the wavelet-based coarse-grained models explicitly link time and length scales. Furthermore, a straightforward method for the reintroduction of omitted degrees of freedom is presented, which plays a major role in maintaining model fidelity in long-time simulations and in capturing emergent behaviors.

  8. PM levels in urban area of Bejaia

    NASA Astrophysics Data System (ADS)

    Benaissa, Fatima; Maesano, Cara Nichole; Alkama, Rezak; Annesi-Maesano, Isabella

    2017-04-01

    Air pollution is not routinely measured in Bejaia City, Algeria, an urban area of around 200,000 inhabitants. We present first time measurements of particulate matter (PM) mass concentrations for this city (PM10, PM7, PM4, PM2.5 and PM1) over the course of one week, from July 8 to July 14, 2015. This study covered eight urban sampling sites and 169 measurements were obtained to determine mass concentration levels. Air pollution is not routinely measured in Bejaia City, Algeria, an urban area of around 200,000 inhabitants. We present first time measurements of particulate matter (PM) mass concentrations for this city (PM10, PM7, PM4, PM2.5 and PM1) over the course of one week, from July 8 to July 14, 2015. This study covered eight urban sampling sites and 169 measurements were obtained to determine mass concentration levels. The average city-wide PM10 and PM2.5 concentrations measured during this sampling were 87.8 ± 33.9 and 28.7 ± 10.6 µg/m3 respectively. These results show that particulate matter levels are high and exceed Algerian ambient air quality standards (maximum 80 µg/m3, without specifying the particle size). Further, PM10 and PM2.5 averages were well above the prescribed 24-hour average World Health Organization Air Quality Guidelines (WHO AQG) (50 µg/m3 for PM10 and 25 µg/m3 for PM2.5). The PM1, PM2,5, PM4 and PM7 fractions accounted for 15%, 32 %, 56% and 78% respectively of the PM10 measurements. Our analysis reveals that PM concentration variations in the study region were influenced primarily by traffic. In fact, lower PM10 concentrations (21.7 and 33.1 µg/m3) were recorded in residential sites while higher values (53.1, and 45.2 µg/m3) were registered in city centers. Keywords: Particulate matter, Urban area, vehicle fleet, Bejaia.

  9. The powdery mildew resistance gene Pm8 derived from rye is suppressed by its wheat ortholog Pm3.

    PubMed

    Hurni, Severine; Brunner, Susanne; Stirnweis, Daniel; Herren, Gerhard; Peditto, David; McIntosh, Robert A; Keller, Beat

    2014-09-01

    The powdery mildew resistance gene Pm8 derived from rye is located on a 1BL.1RS chromosome translocation in wheat. However, some wheat lines with this translocation do not show resistance to isolates of the wheat powdery mildew pathogen avirulent to Pm8 due to an unknown genetically dominant suppression mechanism. Here we show that lines with suppressed Pm8 activity contain an intact and expressed Pm8 gene. Therefore, the absence of Pm8 function in certain 1BL.1RS-containing wheat lines is not the result of gene loss or mutation but is based on suppression. The wheat gene Pm3, an ortholog of rye Pm8, suppressed Pm8-mediated powdery mildew resistance in lines containing Pm8 in a transient single-cell expression assay. This result was further confirmed in transgenic lines with combined Pm8 and Pm3 transgenes. Expression analysis revealed that suppression is not the result of gene silencing, either in wheat 1BL.1RS translocation lines carrying Pm8 or in transgenic genotypes with both Pm8 and Pm3 alleles. In addition, a similar abundance of the PM8 and PM3 proteins in single or double homozygous transgenic lines suggested that a post-translational mechanism is involved in suppression of Pm8. Co-expression of Pm8 and Pm3 genes in Nicotiana benthamiana leaves followed by co-immunoprecipitation analysis showed that the two proteins interact. Therefore, the formation of a heteromeric protein complex might result in inefficient or absent signal transmission for the defense reaction. These data provide a molecular explanation for the suppression of resistance genes in certain genetic backgrounds and suggest ways to circumvent it in future plant breeding. © 2014 The Authors The Plant Journal © 2014 John Wiley & Sons Ltd.

  10. Scientific Considerations for Evaluating Cancer Bioassays Conducted by the Ramazzini Institute

    PubMed Central

    Caldwell, Jane C.; Jinot, Jennifer; Evans, Marina V.; Cote, Ila; Vandenberg, John J.

    2013-01-01

    Background: The Ramazzini Institute (RI) has completed nearly 400 cancer bioassays on > 200 compounds. The European Food Safety Authority (EFSA) and others have suggested that study design and protocol differences between the RI and other laboratories by may contribute to controversy regarding cancer hazard findings, principally findings on lymphoma/leukemia diagnoses. Objective: We aimed to evaluate RI study design, protocol differences, and accuracy of tumor diagnoses for their impact on carcinogenic hazard characterization. Methods: We analyzed the findings from a recent Pathology Working Group (PWG) review of RI procedures and tumor diagnoses, evaluated consistency of RI and other laboratory findings for chemicals identified by the RI as positive for lymphoma/leukemia, and examined evidence for a number of other issues raised regarding RI bioassays. The RI cancer bioassay design and protocols were evaluated in the context of relevant risk assessment guidance from international authorities. Discussion: Although the PWG identified close agreement with RI diagnoses for most tumor types, it did not find close agreement for lymphoma/leukemia of the respiratory tract or for neoplasms of the inner ear and cranium. Here we discuss a) the implications of the PWG findings, particularly lymphoma diagnostic issues; b) differences between RI studies and those from other laboratories that are relevant to evaluating RI cancer bioassays; and c) future work that may help resolve some concerns. Conclusions: We concluded that a) issues related to respiratory tract infections have complicated diagnoses at that site (i.e., lymphoma/leukemia), as well as for neoplasms of the inner ear and cranium, and b) there is consistency and value in RI studies for identification of other chemical-related neoplasia. Citation: Gift JS, Caldwell JC, Jinot J, Evans MV, Cote I, Vandenberg JJ. 2013. Scientific considerations for evaluating cancer bioassays conducted by the Ramazzini Institute

  11. A yeast bioassay for direct measurement of thyroid hormone disrupting effects in water without sample extraction, concentration, or sterilization.

    PubMed

    Li, Jian; Ren, Shujuan; Han, Shaolun; Li, Na

    2014-04-01

    The present study introduces an improved yeast bioassay for rapid yet sensitive evaluation of thyroid hormone disruption at the level of thyroid receptor (TR) in environmental water samples. This assay does not require water sample preparation and thus requires very little hands-on time. Based on different β-galactosidase substrates, two modified bioassays, a colorimetric bioassay and a chemiluminescent bioassay, were developed. The compounds tested included the known thyroid hormone 3,3',5-triiodo-l-thyronine (T3), the specific TR antagonist amiodarone hydrochloride (AH) and phthalate esters (PAEs), which potentially disrupt thyroid hormone signaling. The EC50 values for T3 were similar to those previously obtained using a 96-well plate bioassay. TR antagonism by AH was studied in the presence of 2.5 × 10(-7)M T3, and the concentration producing 20% of the maximum effect (RIC20) for AH was 3.1 × 10(-7)M and 7.8 × 10(-9)M for the colorimetric bioassay and chemiluminescent bioassay, respectively. None of the tested PAEs induced β-galactosidase expression, but diethylhexyl phthalate, benzyl butyl phthalate and dibutyl phthalate demonstrated TR antagonism. Furthermore, water samples collected from Guanting reservoir in Beijing were evaluated. Although TR agonism was not observed, antagonism was detected in all water samples and is expressed as AH equivalents. The toxicology equivalent quantity values obtained by the chemiluminescent bioassay ranged from 21.2 ± 1.6 to 313.9 ± 28.8 μg L(-1) AH, and similar values were obtained for the colorimetric bioassay. The present study shows that the modified yeast bioassay can be used as a valuable tool for quantification of thyroid hormone disrupting effects in environmental water samples. Copyright © 2013 Elsevier Ltd. All rights reserved.

  12. 40 CFR Table C-4 to Subpart C of... - Test Specifications for PM 10, PM 2.5 and PM 10-2.5 Candidate Equivalent Methods

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 6 2014-07-01 2014-07-01 false Test Specifications for PM 10, PM 2.5 and PM 10-2.5 Candidate Equivalent Methods C Table C-4 to Subpart C of Part 53 Protection of... Reference Methods Pt. 53, Subpt. C, Table C-4 Table C-4 to Subpart C of Part 53—Test Specifications for PM...

  13. 40 CFR Table C-4 to Subpart C of... - Test Specifications for PM 10, PM 2.5 and PM 10-2.5 Candidate Equivalent Methods

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 6 2013-07-01 2013-07-01 false Test Specifications for PM 10, PM 2.5 and PM 10-2.5 Candidate Equivalent Methods C Table C-4 to Subpart C of Part 53 Protection of... Reference Methods Pt. 53, Subpt. C, Table C-4 Table C-4 to Subpart C of Part 53—Test Specifications for PM...

  14. Coarse graining atomistic simulations of plastically deforming amorphous solids

    NASA Astrophysics Data System (ADS)

    Hinkle, Adam R.; Rycroft, Chris H.; Shields, Michael D.; Falk, Michael L.

    2017-05-01

    The primary mode of failure in disordered solids results from the formation and persistence of highly localized regions of large plastic strains known as shear bands. Continuum-level field theories capable of predicting this mechanical response rely upon an accurate representation of the initial and evolving states of the amorphous structure. We perform molecular dynamics simulations of a metallic glass and propose a methodology for coarse graining discrete, atomistic quantities, such as the potential energies of the elemental constituents. A strain criterion is established and used to distinguish the coarse-grained degrees-of-freedom inside the emerging shear band from those of the surrounding material. A signal-to-noise ratio provides a means of evaluating the strength of the signal of the shear band as a function of the coarse graining. Finally, we investigate the effect of different coarse graining length scales by comparing a two-dimensional, numerical implementation of the effective-temperature description in the shear transformation zone (STZ) theory with direct molecular dynamics simulations. These comparisons indicate the coarse graining length scale has a lower bound, above which there is a high level of agreement between the atomistics and the STZ theory, and below which the concept of effective temperature breaks down.

  15. A Bioassay System Using Bioelectric Signals from Small Fish

    NASA Astrophysics Data System (ADS)

    Terawaki, Mitsuru; Soh, Zu; Hirano, Akira; Tsuji, Toshio

    Although the quality of tap water is generally examined using chemical assay, this method cannot be used for examination in real time. Against such a background, the technique of fish bioassay has attracted attention as an approach that enables constant monitoring of aquatic contamination. The respiratory rhythms of fish are considered an efficient indicator for the ongoing assessment of water quality, since they are sensitive to chemicals and can be indirectly measured from bioelectric signals generated by breathing. In order to judge aquatic contamination accurately, it is necessary to measure bioelectric signals from fish swimming freely as well as to stably discriminate measured signals, which vary between individuals. However, no bioassay system meeting the above requirements has yet been established. This paper proposes a bioassay system using bioelectric signals generated from small fish in free-swimming conditions. The system records signals using multiple electrodes to cover the extensive measurement range required in a free-swimming environment, and automatically discriminates changes in water quality from signal frequency components. This discrimination is achieved through an ensemble classification method using probability neural networks to solve the problem of differences between individual fish. The paper also reports on the results of related validation experiments, which showed that the proposed system was able to stably discriminate between water conditions before and after bleach exposure.

  16. In vitro bioassays for detecting dioxin-like activity--application potentials and limits of detection, a review.

    PubMed

    Eichbaum, Kathrin; Brinkmann, Markus; Buchinger, Sebastian; Reifferscheid, Georg; Hecker, Markus; Giesy, John P; Engwall, Magnus; van Bavel, Bert; Hollert, Henner

    2014-07-15

    Use of in vitro assays as screening tool to characterize contamination of a variety of environmental matrices has become an increasingly popular and powerful toolbox in the field of environmental toxicology. While bioassays cannot entirely substitute analytical methods such as gas chromatography-mass spectrometry (GC-MS), the increasing improvement of cell lines and standardization of bioassay procedures enhance their utility as bioanalytical pre-screening tests prior to more targeted chemical analytical investigations. Dioxin-receptor-based assays provide a holistic characterization of exposure to dioxin-like compounds (DLCs) by integrating their overall toxic potential, including potentials of unknown DLCs not detectable via e.g. GC-MS. Hence, they provide important additional information with respect to environmental risk assessment of DLCs. This review summarizes different in vitro bioassay applications for detection of DLCs and considers the comparability of bioassay and chemical analytically derived toxicity equivalents (TEQs) of different approaches and various matrices. These range from complex samples such as sediments through single reference to compound mixtures. A summary of bioassay derived detection limits (LODs) showed a number of current bioassays to be equally sensitive as chemical methodologies, but moreover revealed that most of the bioanalytical studies conducted to date did not report their LODs, which represents a limitation with regard to low potency samples. Copyright © 2014 Elsevier B.V. All rights reserved.

  17. Comparison of iterative inverse coarse-graining methods

    NASA Astrophysics Data System (ADS)

    Rosenberger, David; Hanke, Martin; van der Vegt, Nico F. A.

    2016-10-01

    Deriving potentials for coarse-grained Molecular Dynamics (MD) simulations is frequently done by solving an inverse problem. Methods like Iterative Boltzmann Inversion (IBI) or Inverse Monte Carlo (IMC) have been widely used to solve this problem. The solution obtained by application of these methods guarantees a match in the radial distribution function (RDF) between the underlying fine-grained system and the derived coarse-grained system. However, these methods often fail in reproducing thermodynamic properties. To overcome this deficiency, additional thermodynamic constraints such as pressure or Kirkwood-Buff integrals (KBI) may be added to these methods. In this communication we test the ability of these methods to converge to a known solution of the inverse problem. With this goal in mind we have studied a binary mixture of two simple Lennard-Jones (LJ) fluids, in which no actual coarse-graining is performed. We further discuss whether full convergence is actually needed to achieve thermodynamic representability.

  18. Coarse-sediment bands on the inner shelf of southern Monterey Bay, California

    USGS Publications Warehouse

    Hunter, R.E.; Dingler, J.R.; Anima, R.J.; Richmond, B.M.

    1988-01-01

    Bands of coarse sand that trend parallel to the shore, unlike the approximately shore-normal bands found in many inner shelf areas, occur in southern Monterey Bay at water depths of 10-20 m, less than 1 km from the shore. The bands are 20-100 m wide and alternate with bands of fine sand that are of similar width. The coarse-sand bands are as much as 1 m lower than the adjacent fine-sand bands, which have margins inclined at angles of about 20??. The mean grain sizes of the coarse and fine sand are in the range of 0.354-1.0 mm and 0.125-0.354 mm, respectively. Wave ripples that average about 1 m in spacing always occur in the coarse-sand bands. Over a period of 3 yrs, the individual bands moved irregularly and changed in shape, as demonstrated by repeated sidescan sonar surveys and by the monitoring of rods jetted into the sea floor. However, the overall pattern and distribution of the bands remained essentially unchanged. Cores, 0.5-1.0 m long, taken in coarse-sand bands contain 0.2-0.5 m of coarse sand overlying fine sand or interbedded fine and coarse sand. Cores from fine-sand bands have at least one thin coarse sand layer at about the depth of the adjacent coarse-sand band. None of the cores revealed a thick deposit of coarse sand. The shore-parallel bands are of unknown origin. Their origin is especially puzzling because approximately shore-normal bands are present in parts of the study area and immediately to the north. ?? 1988.

  19. COARSEMAP: synthesis of observations and models for coarse-mode aerosols

    NASA Astrophysics Data System (ADS)

    Wiedinmyer, C.; Lihavainen, H.; Mahowald, N. M.; Alastuey, A.; Albani, S.; Artaxo, P.; Bergametti, G.; Batterman, S.; Brahney, J.; Duce, R. A.; Feng, Y.; Buck, C.; Ginoux, P. A.; Chen, Y.; Guieu, C.; Cohen, D.; Hand, J. L.; Harrison, R. M.; Herut, B.; Ito, A.; Losno, R.; Gomez, D.; Kanakidou, M.; Landing, W. M.; Laurent, B.; Mihalopoulos, N.; Mackey, K.; Maenhaut, W.; Hueglin, C.; Milando, C.; Miller, R. L.; Myriokefaitakis, S.; Neff, J. C.; Pandolfi, M.; Paytan, A.; Perez Garcia-Pando, C.; Prank, M.; Prospero, J. M.; Tamburo, E.; Varrica, D.; Wong, M.; Zhang, Y.

    2017-12-01

    Coarse mode aerosols influence Earth's climate and biogeochemistry by interacting with long-wave radiation, promoting ice nucleation, and contributing important elements to biogeochemical cycles during deposition. Yet coarse mode aerosols have received less emphasis in the scientific literature. Here we present first efforts to globally synthesize available mass concentration, composition and optical depth data and modeling for the coarse mode aerosols (<10 µm) in a new project called "COARSEMAP" (http://www.geo.cornell.edu/eas/PeoplePlaces/Faculty/mahowald/COARSEMAP/). We seek more collaborators who have observational data, especially including elemental or composition data, and/or who are interested in detailed modeling of the coarse mode. The goal will be publications synthesizing data with models, as well as providing synthesized results to the wider community.

  20. Quantifying the coarse-root biomass of intensively managed loblolly pine plantations

    Treesearch

    Ashley T. Miller; H. Lee Allen; Chris A. Maier

    2006-01-01

    Most of the carbon accumulation during a forest rotation is in plant biomass and the forest floor. Most of the belowground biomass in older loblolly pine (Pinus taeda L.) forests is in coarse roots, and coarse roots persist longer after harvest than aboveground biomass and fine roots. The main objective was to assess the carbon accumulation in coarse...

  1. Quantifying the coarse-root biomass of intensively managed loblolly pine plantations

    Treesearch

    Ashley T. Miller; H. Lee Allen; Chris A. Maier

    2006-01-01

    Most of the carbon accumulation during a forest rotation is in plant biomass and the forest floor. Most of the belowground biomass in older loblolly pine (Pinus taeda L.) forests is in coarse roots, and coarse roots ersist longer after harvest than aboveground biomass and fine oots. The main objective was to assess the carbon accumulation in coarse...

  2. STRESS ETHYLENE: A BIOASSAY FOR RHIZOSPHERE-APPLIED PHYTOTOXICANTS

    EPA Science Inventory

    A bioassay for rhizosphere-applied phytotoxicants was developed and evaluated with a broad range of chemicals. Test substances were applied to the rhizosphere of whole, intact bush bean plants (Phaseolus vulgaris L. cv. Bush Blue Lake 290) grown in a solid support medium and the ...

  3. 40 CFR 93.116 - Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots).

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ..., PM10, and PM2.5 violations (hot-spots). 93.116 Section 93.116 Protection of Environment ENVIRONMENTAL....116 Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots). (a) This paragraph... hot-spot analysis in PM10 and PM2.5 nonattainment and maintenance areas for FHWA/FTA projects that are...

  4. 40 CFR 93.116 - Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots).

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ..., PM10, and PM2.5 violations (hot-spots). 93.116 Section 93.116 Protection of Environment ENVIRONMENTAL....116 Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots). (a) This paragraph... hot-spot analysis in PM10 and PM2.5 nonattainment and maintenance areas for FHWA/FTA projects that are...

  5. 40 CFR 93.116 - Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots).

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ..., PM10, and PM2.5 violations (hot-spots). 93.116 Section 93.116 Protection of Environment ENVIRONMENTAL....116 Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots). (a) This paragraph... hot-spot analysis in PM10 and PM2.5 nonattainment and maintenance areas for FHWA/FTA projects that are...

  6. 40 CFR 93.116 - Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots).

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ..., PM10, and PM2.5 violations (hot-spots). 93.116 Section 93.116 Protection of Environment ENVIRONMENTAL....116 Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots). (a) This paragraph... hot-spot analysis in PM10 and PM2.5 nonattainment and maintenance areas for FHWA/FTA projects that are...

  7. 40 CFR 93.116 - Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots).

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ..., PM10, and PM2.5 violations (hot-spots). 93.116 Section 93.116 Protection of Environment ENVIRONMENTAL....116 Criteria and procedures: Localized CO, PM10, and PM2.5 violations (hot-spots). (a) This paragraph... hot-spot analysis in PM10 and PM2.5 nonattainment and maintenance areas for FHWA/FTA projects that are...

  8. In Vitro Androgen Bioassays as a Detection Method for Designer Androgens

    PubMed Central

    Cooper, Elliot R.; McGrath, Kristine C. Y.; Heather, Alison K.

    2013-01-01

    Androgens are the class of sex steroids responsible for male sexual characteristics, including increased muscle mass and decreased fat mass. Illicit use of androgen doping can be an attractive option for those looking to enhance sporting performance and/or physical appearance. The use of in vitro bioassays to detect androgens, especially designer or proandrogens, is becoming increasingly important in combating androgen doping associated with nutritional supplements. The nutritional sports supplement market has grown rapidly throughout the past decade. Many of these supplements contain androgens, designer androgens or proandrogens. Many designer or proandrogens cannot be detected by the standard highly-sensitive screening methods such as gas chromatography-mass spectrometry because their chemical structure is unknown. However, in vitro androgen bioassays can detect designer and proandrogens as these assays are not reliant on knowing the chemical structure but instead are based on androgen receptor activation. For these reasons, it may be advantageous to use routine androgen bioassay screening of nutraceutical samples to help curb the increasing problem of androgen doping. PMID:23389345

  9. Fluorescence-based bioassays for the detection and evaluation of food materials.

    PubMed

    Nishi, Kentaro; Isobe, Shin-Ichiro; Zhu, Yun; Kiyama, Ryoiti

    2015-10-13

    We summarize here the recent progress in fluorescence-based bioassays for the detection and evaluation of food materials by focusing on fluorescent dyes used in bioassays and applications of these assays for food safety, quality and efficacy. Fluorescent dyes have been used in various bioassays, such as biosensing, cell assay, energy transfer-based assay, probing, protein/immunological assay and microarray/biochip assay. Among the arrays used in microarray/biochip assay, fluorescence-based microarrays/biochips, such as antibody/protein microarrays, bead/suspension arrays, capillary/sensor arrays, DNA microarrays/polymerase chain reaction (PCR)-based arrays, glycan/lectin arrays, immunoassay/enzyme-linked immunosorbent assay (ELISA)-based arrays, microfluidic chips and tissue arrays, have been developed and used for the assessment of allergy/poisoning/toxicity, contamination and efficacy/mechanism, and quality control/safety. DNA microarray assays have been used widely for food safety and quality as well as searches for active components. DNA microarray-based gene expression profiling may be useful for such purposes due to its advantages in the evaluation of pathway-based intracellular signaling in response to food materials.

  10. Fluorescence-Based Bioassays for the Detection and Evaluation of Food Materials

    PubMed Central

    Nishi, Kentaro; Isobe, Shin-Ichiro; Zhu, Yun; Kiyama, Ryoiti

    2015-01-01

    We summarize here the recent progress in fluorescence-based bioassays for the detection and evaluation of food materials by focusing on fluorescent dyes used in bioassays and applications of these assays for food safety, quality and efficacy. Fluorescent dyes have been used in various bioassays, such as biosensing, cell assay, energy transfer-based assay, probing, protein/immunological assay and microarray/biochip assay. Among the arrays used in microarray/biochip assay, fluorescence-based microarrays/biochips, such as antibody/protein microarrays, bead/suspension arrays, capillary/sensor arrays, DNA microarrays/polymerase chain reaction (PCR)-based arrays, glycan/lectin arrays, immunoassay/enzyme-linked immunosorbent assay (ELISA)-based arrays, microfluidic chips and tissue arrays, have been developed and used for the assessment of allergy/poisoning/toxicity, contamination and efficacy/mechanism, and quality control/safety. DNA microarray assays have been used widely for food safety and quality as well as searches for active components. DNA microarray-based gene expression profiling may be useful for such purposes due to its advantages in the evaluation of pathway-based intracellular signaling in response to food materials. PMID:26473869

  11. Highly variable sensitivity of five binding and two bio-assays for TSH-receptor antibodies.

    PubMed

    Diana, T; Wüster, C; Kanitz, M; Kahaly, G J

    2016-10-01

    TSH-receptor (TSHR) antibodies (Ab) can be measured with binding or bio-assays. Sensitivity and specificity of five binding and two bio-assays were compared. TSHR-blocking (TBAb) and TSHR-stimulating (TSAb) Ab were measured with reporter bio-assays. Blocking activity was defined as percent inhibition of luciferase expression relative to induction with bTSH alone. TSAb was reported as percentage of specimen-to-reference ratio (SRR%). TSHR-binding inhibitory immunoglobulins (TBII) were measured with Kronus, Dynex, Kryptor, Cobas, and Immulite. Sixty patients with Graves' disease (GD), 20 with Hashimoto's thyroiditis (HT), and 20 healthy controls (C) were included. C tested negative in all assays (specificity 100 %) while all 60 hyperthyroid GD patients tested positive in the TSAb bio-assay (sensitivity 100 %). Among these 60 GD patients, 20 had low TSAb positivity (SRR% 140-279), but were TBII positive in only 20 (100 %), 7 (35 %), 9 (45 %), 11 (55 %), and 18 (90 %) using the Kronus, Dynex, Kryptor, Cobas, and Immulite, respectively. In 20 moderate TSAb-positive (SRR% 280-420) patients, TBII tested positive in 20 (100 %), 14 (70 %), 13 (65 %), 16 (80 %), and 19 (95 %), respectively. The high (SRR% > 420) TSAb-positive patients were all TBII positive. All 20 hypothyroid HT patients tested TBAb positive (sensitivity 100 %) in the bio-assay while they tested TBII positive in 20 (100 %), 18 (90 %), 20, 20, and 18, respectively. Results obtained with two luminometers correlated for TSAb positive (r = 0.99, p < 0.001), TBAb positive (r = 0.88, p < 0.001), and C (r = 0.86, p < 0.001). None of the binding assays differentiated between TSAb and TBAb. Sensitivity is highly variable between binding and bio-assays for TSHR-Abs.

  12. The H4IIE cell bioassay as an indicator of dioxin-like chemicals in wildlife and the environment

    USGS Publications Warehouse

    White, J.J.; Schmitt, C.J.; Tillitt, D. E.

    2004-01-01

    The H4IIE cell bioassay has proven utility as a screening tool for planar halogenated hydrocarbons (PHHs) and structurally similar chemicals accumulated in organisms from the wild. This bioassay has additional applications in hazard assessment of PHH exposed populations. In this review, the toxicological principles, current protocols, performance criteria, and field applications for the assay are described. The H4IIE cell bioassay has several advantages over the analytical measurement of PHHs in environmental samples, but conclusions from studies can be strengthened when both bioassay and analytical chemistry data are presented together. Often, the bioassay results concur with biological effects in organisms and support direct measures of PHHs. For biomonitoring purposes and prioritization of PHH-contaminated environments, the H4IIE bioassay may be faster and less expensive than analytical measurements. The H4IIE cell bioassay can be used in combination with other biomarkers such as in vivo measurements of CYP1A1 induction to help pinpoint the sources and identities of dioxin-like chemicals. The number of studies that measure H4IIE-derived TCDD-EQs continues to increase, resulting in subtle improvements over time. Further experiments are required to determine if TCDD-EQs derived from mammalian cells are adequate predictors of toxicity to non-mammalian species. The H4IIE cell bioassay has been used in over 300 published studies, and its combination of speed, simplicity, and ability to integrate the effects of complex containment mixtures makes it a valuable addition to hazard assessment and biomonitoring studies.

  13. Flow-through bioassay for measuring bioaccumulation of toxic substances from sediment

    USGS Publications Warehouse

    Mac, Michael J.; Edsall, Carol C.; Hesselberg, Robert J.; Sayers, Richard E.

    1984-01-01

    Over 10 million cubic meters of sediment are dredged annually from Great Lakes waterways. Because much of this material is taken from harbors, connecting channels, and other nearshore areas that often are contaminated with toxic substances, the sediments proposed for dredging need to be evaluated for the presence of bioavailable contaminants and the potential for toxicity to the biota. Sound decisions on the appropriate disposal of the dredged material can be made only after such an evaluation. Presently, no standardized procedure exists for evaluating dredged material in freshwater systems although current criteria for discharge of dredged material into marine water have been developed (USEPA/CE 1977). In the ocean discharge guideline, it is recommended that bioassays be conducted on liquid, solid, and suspended particulate phases of dredged material. because it appears that the solid phase has the greatest potential for environmental damage and because measurement of bioaccumulation must be made to evaluate sediments for disposal (USEPA/CE 1977, Seeyle and Mac 1983), we developed a bioassay for testing the solid phase of dredged material that measures the survival of organisms and, perhaps more important, the bioaccumulation of toxic substances by aquatic organisms from naturally contaminated sediments (Peddicord et al. 1980; Rubinstein et al. 1980, 1983; Seeyle st al. 1982), several have used testing methods that result in unacceptable mortality to control organisms (Bahnick et al. 1981, Prater et al. 1983). Our bioassay is intended to estimate the potential for bioaccumlation of contaminants from sediments that are not acutely toxic to test organisms, but are suspected of containing persistent contaminants. By using test organisms that are not highly susceptible to toxic compounds, the bioaccumulation test allows estimation of the potential food-chain accumulation of contaminants that may occur in local biota from surficial sediments. In practice

  14. Satellite-based high-resolution PM2.5 estimation over the Beijing-Tianjin-Hebei region of China using an improved geographically and temporally weighted regression model.

    PubMed

    He, Qingqing; Huang, Bo

    2018-05-01

    Ground fine particulate matter (PM2.5) concentrations at high spatial resolution are substantially required for determining the population exposure to PM2.5 over densely populated urban areas. However, most studies for China have generated PM2.5 estimations at a coarse resolution (≥10 km) due to the limitation of satellite aerosol optical depth (AOD) product in spatial resolution. In this study, the 3 km AOD data fused using the Moderate Resolution Imaging Spectroradiometer (MODIS) Collection 6 AOD products were employed to estimate the ground PM2.5 concentrations over the Beijing-Tianjin-Hebei (BTH) region of China from January 2013 to December 2015. An improved geographically and temporally weighted regression (iGTWR) model incorporating seasonal characteristics within the data was developed, which achieved comparable performance to the standard GTWR model for the days with paired PM 2.5 - AOD samples (Cross-validation (CV) R 2  = 0.82) and showed better predictive power for the days without PM 2.5 - AOD pairs (the R 2 increased from 0.24 to 0.46 in CV). Both iGTWR and GTWR (CV R 2  = 0.84) significantly outperformed the daily geographically weighted regression model (CV R 2  = 0.66). Also, the fused 3 km AODs improved data availability and presented more spatial gradients, thereby enhancing model performance compared with the MODIS original 3/10 km AOD product. As a result, ground PM2.5 concentrations at higher resolution were well represented, allowing, e.g., short-term pollution events and long-term PM2.5 trend to be identified, which, in turn, indicated that concerns about air pollution in the BTH region are justified despite its decreasing trend from 2013 to 2015. Copyright © 2018 Elsevier Ltd. All rights reserved.

  15. 75 FR 44142 - Determination of Attainment for PM-10; Fort Hall PM-10 Nonattainment Area, Idaho

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-28

    ... of Attainment for PM-10; Fort Hall PM-10 Nonattainment Area, Idaho AGENCY: Environmental Protection Agency (EPA). ACTION: Final rule. SUMMARY: EPA is finalizing its determination that the Fort Hall PM-10... Standard for particulate matter with an aerodynamic diameter of less than or equal to 10 microns (PM-10...

  16. Use of bioassays to assess hazard of food contact material extracts: State of the art.

    PubMed

    Severin, Isabelle; Souton, Emilie; Dahbi, Laurence; Chagnon, Marie Christine

    2017-07-01

    This review focuses on the use of in vitro bioassays for the hazard assessment of food contact materials (FCM) as a relevant strategy, in complement to analytical methods. FCM may transfer constituents to foods, not always detected by analytical chemistry, resulting in low but measurable human exposures. Testing FCM extracts with bioassays represents the biological response of a combination of substances, able to be released from the finished materials. Furthermore, this approach is particularly useful regarding the current risk assessment challenges with unpredicted/unidentified non-intentionally added substances (NIAS) that can be leached from the FCM in the food. Bioassays applied to assess hazard of different FCM types are described for, to date, the toxicological endpoints able to be expressed at low levels; cytotoxicity, genotoxicity and endocrine disruption potential. The bioassay strengths and relative key points needed to correctly use and improve the performance of bioassays for an additional FCM risk assessment is developed. This review compiles studies showing that combining both chemical and toxicological analyses presents a very promising and pragmatic tool for identifying new undesirable NIAS (not predicted) which can represent a great part of the migrating substances and/or "cocktail effect". Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. A magnetic nanobead-based bioassay provides sensitive detection of single- and biplex bacterial DNA using a portable AC susceptometer.

    PubMed

    Strömberg, Mattias; Zardán Gómez de la Torre, Teresa; Nilsson, Mats; Svedlindh, Peter; Strømme, Maria

    2014-01-01

    Bioassays relying on magnetic read-out using probe-tagged magnetic nanobeads are potential platforms for low-cost biodiagnostic devices for pathogen detection. For optimal assay performance it is crucial to apply an easy, efficient and robust bead-probe conjugation protocol. In this paper, sensitive (1.5 pM) singleplex detection of bacterial DNA sequences is demonstrated in a portable AC susceptometer by a magnetic nanobead-based bioassay principle; the volume-amplified magnetic nanobead detection assay (VAM-NDA). Two bead sizes, 100 and 250 nm, are investigated along with a highly efficient, rapid, robust, and stable conjugation chemistry relying on the avidin-biotin interaction for bead-probe attachment. Avidin-biotin conjugation gives easy control of the number of detection probes per bead; thus allowing for systematic investigation of the impact of varying the detection probe surface coverage upon bead immobilization in rolling circle amplified DNA-coils. The existence of an optimal surface coverage is discussed. Biplex VAM-NDA detection is for the first time demonstrated in the susceptometer: Semi-quantitative results are obtained and it is concluded that the concentration of DNA-coils in the incubation volume is of crucial importance for target quantification. The present findings bring the development of commercial biodiagnostic devices relying on the VAM-NDA further towards implementation in point-of-care and outpatient settings. © 2013 The Authors. Biotechnology Journal published by Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim. This is an open access article under the terms of the Creative Commons Attribution-License, which permits use and distribution in any medium, provided the original work is properly cited.

  18. Determination of water-soluble elements in PM2.5, PM10, and PM2.5-10 collected in the surroundings of power plants

    NASA Astrophysics Data System (ADS)

    Zajusz-Zubek, Elwira; Mainka, Anna; Kaczmarek, Konrad

    2018-01-01

    The analysis reported in this study was performed to characterize the concentrations and water-soluble content of trace elements (As, Cd, Co, Cr, Hg, Mn, Ni, Pb, Sb and Se) in PM2.5, PM10 and PM2.5-10 samples collected in the surroundings of power plants in southern Poland. The solubility of trace elements bound to PM2.5 and PM10 was higher than for PM2.5-10, and in most cases, significant differences were revealed in the relative percentage concentrations of the water-soluble fractions. The occurrence of Cd, Cr, Mn, Ni, Pb and Se in first PCA (Principal Component Analysis) factor (PC1) - indicate coal combustion processes as the potential source of these elements. Other factors indicate two further anthropogenic sources: the resuspension of road dust due to vehicular activities and waste burning in domestic sources - factor (PC2), and, soil dust sources affected by fugitive dust from the mining processes and unpaved roads, as well as transportation and deposition of coal -factor (PC3).

  19. A Carcinogenicity Bioassay of Isobutyl 2-Cyanoacrylate (IBC) in Fischer-344 Rats

    DTIC Science & Technology

    1990-01-23

    subcutaneous mass M Control 084 24 Oct 85 Pallor, weak, depressed M Low IBC 080 24 Oct 85 Died in cage M High IBC 203 24 Oct 85 Pallor, large M Low IBC intra...abdominal mass 424 25 Oct 85 Weight loss, dehydrated, F High IBC depressed * Animals were sacrificed to conserve tissues in face of imminent death...bioassays due to its low incidence of spontaneous mammary gland and liver cancer . This strain is recommended by the NCI Carcinogenesis Bioassay Program

  20. Using lone star ticks, Amblyomma americanum (Acari: Ixodidae) in in vitro laboratory bioassays of repellents: dimensions, duration, and variability

    USDA-ARS?s Scientific Manuscript database

    The in vitro bioassay is an important tool in repellent discovery and development, with a variety of bioassays used in recent years. Several factors, such as the dimensions and configuration of test surfaces and duration of tick exposure, can influence the outcome of bioassays. We tested two tick re...

  1. Book Review: Bioassays with Arthropods: 2nd Edition

    USDA-ARS?s Scientific Manuscript database

    The technical book "Bioassays with Arthropods: 2nd Edition" (2007. Jacqueline L. Robertson, Robert M. Russell, Haiganoush K, Preisler and N. E. Nevin, Eds. CRC Press, Boca Raton, FL, 224 pp.) was reviewed for the scientific readership of the peer-reviewed publication Journal of Economic Entomology. ...

  2. Minimum detectable dose as a measure of bioassay programme capability.

    PubMed

    Carbaugh, E H

    2003-01-01

    This paper suggests that minimum detectable dose (MDD) be used to describe the capability of bioassay programmes for which intakes are expected to be rare. This allows expression of the capability in units that correspond directly to primary dose limits. The concept uses the well established analytical statistic minimum detectable amount (MDA) as the starting point, and assumes MDA detection at a prescribed time post-intake. The resulting dose can then be used as an indication of the adequacy or capability of the programme for demonstrating compliance with the performance criteria. MDDs can be readily tabulated or plotted to demonstrate the effectiveness of different types of monitoring programmes. The inclusion of cost factors for bioassay measurements can allow optimisation.

  3. [Investigation on pattern of quality control for Chinese materia medica based on famous-region drug and bioassay--the work reference].

    PubMed

    Yan, Dan; Xiao, Xiaohe

    2011-05-01

    Selection and standardization of the work reference are the technical issues to be faced with in the bioassay of Chinese materia medica. Taking the bioassay of Coptis chinensis. as an example, the manufacture process of the famous-region drugs extraction was explained from the aspects of original identification, routine examination, component analysis and bioassay. The common technologies were extracted, and the selection and standardization procedures of the work reference for the bioassay of Chinese materia medica were drawn up, so as to provide technical support for constructing a new mode and method of the quality control of Chinese materia medica based on the famous-region drugs and bioassay.

  4. Evaluation of p,p'-DDT as a reference toxicant in bioassays

    USGS Publications Warehouse

    Marking, Leif L.

    1966-01-01

    p,p'-DDT was tested as a reference standard toxicant against 19 species of freshwater fish, including 39 lots from 10 sources. In particular, the rapidity, nonselectivity, and consistency of its toxicity to fish were evaluated in 96-hour static bioassays. The chemical was rapidly and consistently toxic to lake trout, carp, green sunfish, bluegill, and yellow perch. It lacked either rapid or consistent toxicity to rainbow trout, brook trout, goldfish, fathead minnows, and longear sunfish in 96-hour tests. Thus, p,p'-DDT is of limited usefulness as a reference standard toxicant in large bioassays with many species of fish.

  5. Colloidal crystal beads composed of core-shell particles for multiplex bioassay.

    PubMed

    Xu, Hua; Zhu, Cun; Zhao, Yuanjin; Zhao, Xiangwei; Hu, Jing; Gu, Zhongze

    2009-04-01

    A convenient method was developed to fabricate colloidal crystal beads (CCBs) with tough mechanical strength, which was used as encoded carriers for multiplex bioassay. The latex particles used for the construction of the CCBs were designed with a rigid core PS and a elastomeric shell poly(MMA/EA/MAA), and were prepared via one-step soap-free emulsion polymerization. The as-above-prepared CCBs were thermo-treated to drive the elastomeric shells of adjacent latex particles joining together. It was found that the coalescence of latex particles can greatly improve the mechanical strength of the CCBs for multiplex bioassay.

  6. Considerations for Bioassay Monitoring of Mixtures of Radionuclides

    DOE PAGES

    Klumpp, John; Waters, Tom; Bertelli, Luiz

    2017-10-01

    Complying with regulations for bioassay monitoring of radionuclide intakes is significantly more complex for mixtures than it is for pure radionuclides. Different constituents will naturally have different dose coefficients, be detectable at significantly different levels, and may require very different amounts of effort to bioassay. The ability to use certain constituents as surrogates for others will depend on how well characterized the mixture is, as well as whether the employee is also working with other radionuclides. This is further compounded by the fact that the composition of a mixture (or even of a pure radionuclide) is likely to change overmore » time. Internal dosimetrists must decide how best to monitor employees who work with radionuclide mixtures. In particular, they must decide which constituents should be monitored routinely, which constituents only need to be monitored in the case of an intake, and how to estimate doses based on intakes of monitored and unmonitored constituents.« less

  7. Natural products phytotoxicity A bioassay suitable for small quantities of slightly water-soluble compounds.

    PubMed

    Dornbos, D L; Spencer, G F

    1990-02-01

    A large variety of secondary metabolites that can inhibit germination and/or seedling growth are produced by plants in low quantities. The objective of this study was to develop a bioassay capable of reliably assessing reductions in germination percentage and seedling length of small-seeded plant species caused by exposure to minute quantities of these compounds. The germination and growth of alfalfa (Medicago saliva), annual ryegrass (Lolium multiflorum), and velvetleaf (Abutilon theophrasti) were evaluated against six known phytotoxins from five chemical classes; cinmethylin (a herbicidal cineole derivative) was selected as a comparison standard. Each phytotoxin, dissolved in a suitable organic solvent, was placed on water-agar in small tissue culture wells. After the solvent evaporated, imbibed seeds were placed on the agar; after three days, germination percentages and seedling lengths were measured. Compared to a commonly used filter paper procedure, this modified agar bioassay required smaller quantities of compound per seed for comparable bioassay results. This bioassay also readily permitted the measurement of seedling length, a more sensitive indicator of phytotoxicity than germination. Seedling length decreased sigmoidally as the toxin concentration increased logarithmically. Phytotoxicity was a function of both compound and plant species. Cinmethylin, a grass herbicide, reduced the length of annual ryegrass seedlings by 90-100%, whereas that of alfalfa and velvetleaf was inhibited slightly. The agar bioassay facilitated the rapid and reliable testing of slightly water-soluble compounds, requiring only minute quantities of each compound to give reproducible results.

  8. Recycled Coarse Aggregate Produced by Pulsed Discharge in Water

    NASA Astrophysics Data System (ADS)

    Namihira, Takao; Shigeishi, Mitsuhiro; Nakashima, Kazuyuki; Murakami, Akira; Kuroki, Kaori; Kiyan, Tsuyoshi; Tomoda, Yuichi; Sakugawa, Takashi; Katsuki, Sunao; Akiyama, Hidenori; Ohtsu, Masayasu

    In Japan, the recycling ratio of concrete scraps has been kept over 98 % after the Law for the Recycling of Construction Materials was enforced in 2000. In the present, most of concrete scraps were recycled as the Lower Subbase Course Material. On the other hand, it is predicted to be difficult to keep this higher recycling ratio in the near future because concrete scraps increase rapidly and would reach to over 3 times of present situation in 2010. In addition, the demand of concrete scraps as the Lower Subbase Course Material has been decreased. Therefore, new way to reuse concrete scraps must be developed. Concrete scraps normally consist of 70 % of coarse aggregate, 19 % of water and 11 % of cement. To obtain the higher recycling ratio, the higher recycling ratio of coarse aggregate is desired. In this paper, a new method for recycling coarse aggregate from concrete scraps has been developed and demonstrated. The system includes a Marx generator and a point to hemisphere mesh electrode immersed in water. In the demonstration, the test piece of concrete scrap was located between the electrodes and was treated by the pulsed discharge. After discharge treatment of test piece, the recycling coarse aggregates were evaluated under JIS and TS and had enough quality for utilization as the coarse aggregate.

  9. Coarse-grained hydrodynamics from correlation functions

    NASA Astrophysics Data System (ADS)

    Palmer, Bruce

    2018-02-01

    This paper will describe a formalism for using correlation functions between different grid cells as the basis for determining coarse-grained hydrodynamic equations for modeling the behavior of mesoscopic fluid systems. Configurations from a molecular dynamics simulation or other atomistic simulation are projected onto basis functions representing grid cells in a continuum hydrodynamic simulation. Equilibrium correlation functions between different grid cells are evaluated from the molecular simulation and used to determine the evolution operator for the coarse-grained hydrodynamic system. The formalism is demonstrated on a discrete particle simulation of diffusion with a spatially dependent diffusion coefficient. Correlation functions are calculated from the particle simulation and the spatially varying diffusion coefficient is recovered using a fitting procedure.

  10. Contribution of microenvironments to personal exposures to PM10 and PM2.5 in summer and winter

    NASA Astrophysics Data System (ADS)

    Hwang, Yunhyung; Lee, Kiyoung

    2018-02-01

    Personal exposure to particulate matter (PM) can be affected by time-activity patterns and microenvironmental concentrations. Particle size is closely associated with potential health problems, where smaller particles have greater effects on health. We investigated the effects of time-activity patterns on personal exposure and the contribution of the microenvironment to personal exposure to PM with maximal diameters of 10 μm and 2.5 μm (PM10 and PM2.5, respectively) in summer and winter. Technicians carried a nephelometer to detect various sizes of PM while engaging in one of nine scripted time-location-activity patterns. The scripted activities were based on the time-activity patterns of nine groups of inhabitants of Seoul, Korea. The monitoring was repeated in summer and winter to assess seasonal variation. The differences of personal exposures to PM10 and PM2.5 in summer and winter were not significant. The greatest PM concentrations occurred in restaurants. The PM2.5/PM10 ratios were varied from 0.35 at schools to 0.92 at stores. In both seasons, the residential indoor microenvironment was the largest contributor to personal PM exposure. The other major contributors were restaurants, offices, schools, buses, and walking, although their contributions differed by season and particle size. The different microenvironmental contributions among the activity pattern groups suggest that personal exposure significantly differs according to activity pattern.

  11. Effects of wind speed on aerosol spray penetration in adult mosquito bioassay cages.

    PubMed

    Hoffmann, W Clint; Fritz, Bradley K; Farooq, Muhammad; Cooperband, Miriam F

    2008-09-01

    Bioassay cages are commonly used to assess efficacy of insecticides against adult mosquitoes in the field. To correlate adult mortality readings to insecticidal efficacy and/or spray application parameters properly, it is important to know how the cage used in the bioassay interacts with the spray cloud containing the applied insecticide. This study compared the size of droplets, wind speed, and amount of spray material penetrating cages and outside of cages in a wind tunnel at different wind speeds. Two bioassay cages, Center for Medical, Agricultural and Veterinary Entomology (CMAVE) and Circle, were evaluated. The screen materials used on these cages reduced the size of droplets, wind speed, and amount of spray material inside the cages as compared to the spray cloud and wind velocity outside of the cages. When the wind speed in the dispersion tunnel was set at 0.6 m/sec (1.3 mph), the mean wind speed inside of the CMAVE Bioassay Cage and Circle Cage was 0.045 m/sec (0.10 mph) and 0.075 m/sec (0.17 mph), respectively. At air velocities of 2.2 m/sec (4.9 mph) in the dispersion tunnel, the mean wind speed inside of the CMAVE Bioassay Cage and Circle Cage was 0.83 m/sec (1.86 mph) and 0.71 m/sec (1.59 mph), respectively. Consequently, there was a consistent 50-70% reduction of spray material penetrating the cages compared to the spray cloud that approached the cages. These results provide a better understanding of the impact of wind speed, cage design, and construction on ultra-low-volume spray droplets.

  12. The Intersection of CMOS Microsystems and Upconversion Nanoparticles for Luminescence Bioimaging and Bioassays

    PubMed Central

    Wei, Liping.; Doughan, Samer.; Han, Yi.; DaCosta, Matthew V.; Krull, Ulrich J.; Ho, Derek.

    2014-01-01

    Organic fluorophores and quantum dots are ubiquitous as contrast agents for bio-imaging and as labels in bioassays to enable the detection of biological targets and processes. Upconversion nanoparticles (UCNPs) offer a different set of opportunities as labels in bioassays and for bioimaging. UCNPs are excited at near-infrared (NIR) wavelengths where biological molecules are optically transparent, and their luminesce in the visible and ultraviolet (UV) wavelength range is suitable for detection using complementary metal-oxide-semiconductor (CMOS) technology. These nanoparticles provide multiple sharp emission bands, long lifetimes, tunable emission, high photostability, and low cytotoxicity, which render them particularly useful for bio-imaging applications and multiplexed bioassays. This paper surveys several key concepts surrounding upconversion nanoparticles and the systems that detect and process the corresponding luminescence signals. The principle of photon upconversion, tuning of emission wavelengths, UCNP bioassays, and UCNP time-resolved techniques are described. Electronic readout systems for signal detection and processing suitable for UCNP luminescence using CMOS technology are discussed. This includes recent progress in miniaturized detectors, integrated spectral sensing, and high-precision time-domain circuits. Emphasis is placed on the physical attributes of UCNPs that map strongly to the technical features that CMOS devices excel in delivering, exploring the interoperability between the two technologies. PMID:25211198

  13. Bioassay, isolation and studies on the mechanism of action of neurite extension factor

    NASA Technical Reports Server (NTRS)

    Kligman, D.

    1984-01-01

    The identification and purification of molecules active in promoting neurite outgrowth requires a sensitive reproducible bioassay. A quantitative bioassay was utilized to purify a neurite extension factor (NEF) based on counting the number of phase bright neurons with processes at least equal to one cell body diameter after 20 hrs. in culture is defined, serum free medium. Using a combination of heat treatment DEAE cellulose chromatography and gel filtration, an acidic protein of M sub r = 75,000 was highly purified. Upon reduction, it yields subunits of M sub r = 37,000. Purified fractions are active half maximally at 100 ng/ml in inducing neurite outgrowth in this bioassay. Currently, monoclonal antibodies to NEF are being produced. Female Balb C mice were immunized with the antigen and fusions with mouse myeloma cells will be performed to yield hybridoma cells.

  14. Coarse-Grained Clustering Dynamics of Heterogeneously Coupled Neurons.

    PubMed

    Moon, Sung Joon; Cook, Katherine A; Rajendran, Karthikeyan; Kevrekidis, Ioannis G; Cisternas, Jaime; Laing, Carlo R

    2015-12-01

    The formation of oscillating phase clusters in a network of identical Hodgkin-Huxley neurons is studied, along with their dynamic behavior. The neurons are synaptically coupled in an all-to-all manner, yet the synaptic coupling characteristic time is heterogeneous across the connections. In a network of N neurons where this heterogeneity is characterized by a prescribed random variable, the oscillatory single-cluster state can transition-through [Formula: see text] (possibly perturbed) period-doubling and subsequent bifurcations-to a variety of multiple-cluster states. The clustering dynamic behavior is computationally studied both at the detailed and the coarse-grained levels, and a numerical approach that can enable studying the coarse-grained dynamics in a network of arbitrarily large size is suggested. Among a number of cluster states formed, double clusters, composed of nearly equal sub-network sizes are seen to be stable; interestingly, the heterogeneity parameter in each of the double-cluster components tends to be consistent with the random variable over the entire network: Given a double-cluster state, permuting the dynamical variables of the neurons can lead to a combinatorially large number of different, yet similar "fine" states that appear practically identical at the coarse-grained level. For weak heterogeneity we find that correlations rapidly develop, within each cluster, between the neuron's "identity" (its own value of the heterogeneity parameter) and its dynamical state. For single- and double-cluster states we demonstrate an effective coarse-graining approach that uses the Polynomial Chaos expansion to succinctly describe the dynamics by these quickly established "identity-state" correlations. This coarse-graining approach is utilized, within the equation-free framework, to perform efficient computations of the neuron ensemble dynamics.

  15. Coarse and fine particles but not ultrafine particles in urban air trigger hospital admission for asthma in children.

    PubMed

    Iskandar, Amne; Andersen, Zorana Jovanovic; Bønnelykke, Klaus; Ellermann, Thomas; Andersen, Klaus Kaae; Bisgaard, Hans

    2012-03-01

    Short-term exposure to air pollution can trigger hospital admissions for asthma in children, but it is not known which components of air pollution are most important. There are no available studies on the particular effect of ultrafine particles (UFPs) on paediatric admissions for asthma. To study whether short-term exposure to air pollution is associated with hospital admissions for asthma in children. It is hypothesised that (1) the association between asthma admissions and air pollution is stronger with UFPs than with coarse (PM10) and fine (PM2.5) particles, nitrogen oxides (NOx) or nitrogen dioxide (NO2); and (2) infants are more susceptible to the effects of exposure to air pollution than older children. Daily counts of admissions for asthma in children aged 0-18 years to hospitals located within a 15 km radius of the central fixed background urban air pollution measurement station in Copenhagen between 2001 and 2008 were extracted from the Danish National Patient Registry. A time-stratified case crossover design was applied and data were analysed using conditional logistic regression to estimate the effect of air pollution on asthma admissions. A significant association was found between hospital admissions for asthma in children aged 0-18 years and NOx (OR 1.11; 95% CI 1.05 to 1.17), NO2 (1.10; 95% CI 1.04 to 1.16), PM10 (1.07; 95% CI 1.03 to 1.12) and PM2.5 (1.09; 95% CI 1.04 to 1.13); there was no association with UFPs. The association was stronger in infants than in older children for all pollutants, but no statistically significant interaction was detected. Short-term exposure to air pollution can trigger hospital admission for asthma in children, with infants possibly being most susceptible. These effects seemed to be mediated by larger particles and traffic-related gases, whereas UFPs showed no effect.

  16. Source apportionment of ambient PM10 and PM2.5 in Haikou, China

    NASA Astrophysics Data System (ADS)

    Fang, Xiaozhen; Bi, Xiaohui; Xu, Hong; Wu, Jianhui; Zhang, Yufen; Feng, Yinchang

    2017-07-01

    In order to identify the sources of PM10 and PM2.5 in Haikou, 60 ambient air samples were collected in winter and spring, respectively. Fifteen elements (Na, Mg, Al, Si, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn and Pb), water-soluble ions (SO42 - and NO3-), and organic carbon (OC) and elemental carbon (EC) were analyzed. It was clear that the concentration of particulate matter was higher in winter than in spring. The value of PM2.5/PM10 was > 0.6. Moreover, the proportions of TC, ions, Na, Al, Si and Ca were more high in PM10 and PM2.5. The SOC concentration was estimated by the minimum OC/EC ratio method, and deducted from particulate matter compositions when running CMB model. According to the results of CMB model, the resuspended dust (17.5-35.0%), vehicle exhaust (14.9-23.6%) and secondary particulates (20.4-28.8%) were the major source categories of ambient particulate matter. Additionally, sea salt also had partial contribution (3-8%). And back trajectory analysis results showed that particulate matter was greatly affected by regional sources in winter, while less affected in spring. So particulate matter was not only affected by local sources, but also affected by sea salt and regional sources in coastal cities. Further research could focuses on establishing the actual secondary particles profiles and identifying the local and regional sources of PM at once by one model or analysis method.

  17. Coarse graining of atactic polystyrene and its derivatives

    NASA Astrophysics Data System (ADS)

    Agrawal, Anupriya; Perahia, Dvora; Grest, Gary S.

    2014-03-01

    Capturing large length scales in polymers and soft matter while retaining atomistic properties is imperative to computational studies of dynamic systems. Here we present a new methodology developing coarse-grain model based on atomistic simulation of atactic polystyrene (PS). Similar to previous work by Fritz et al., each monomer is described by two coarse grained beads. In contrast to this earlier work where intramolecular potentials were based on Monte Carlo simulation of both isotactic and syndiotactic single PS molecule to capture stereochemistry, we obtained intramolecular interactions from a single molecular dynamics simulation of an all-atom atactic PS melts. The non-bonded interactions are obtained using the iterative Boltzmann inversion (IBI) scheme. This methodology has been extended to coarse graining of poly-(t-butyl-styrene) (PtBS). An additional coarse-grained bead is used to describe the t-butyl group. Similar to the process for PS, the intramolecular interactions are obtained from a single all atom atactic melt simulation. Starting from the non-bonded interactions for PS, we show that the IBI method for the non-bonded interactions of PtBS converges relatively fast. A generalized scheme for substituted PS is currently in development. We would like to acknowledge Prof. Kurt Kremer for helpful discussions during this work.

  18. Vertical and horizontal variability of PM10 source contributions in Barcelona during SAPUSS

    NASA Astrophysics Data System (ADS)

    Brines, Mariola; Dall'Osto, Manuel; Amato, Fulvio; Cruz Minguillón, María; Karanasiou, Angeliki; Alastuey, Andrés; Querol, Xavier

    2016-06-01

    anthropogenic components and were thus further investigated. Overall, three types of dust were identified to affect the urban study area: road dust (35 % of the mineral dust load, 2-4 µg m-3 on average), Saharan dust (28 %, 2.1 µg m-3) and background mineral dust (37 %, 2.8 µg m-3). Our results evidence that although the city of Barcelona broadly shows a homogeneous distribution of PM10 pollution sources, non-exhaust traffic, exhaust traffic and local urban industrial activities are major coarse PM10 aerosol sources.

  19. Vertical and horizontal variability of PM10 source contributions in Barcelona during SAPUSS

    NASA Astrophysics Data System (ADS)

    Brines, M.; Dall'Osto, M.; Amato, F.; Minguillón, M. C.; Karanasiou, A.; Alastuey, A.; Querol, X.

    2015-11-01

    anthropogenic components and were thus further investigated. Overall, three types of dust were identified to affect the urban study area: road dust (35 % of the mineral dust load, 2-4 μg m-3 on average), Saharan dust (28 %, 2.1 μg m-3) and background mineral dust (37 %, 2.8 μg m-3). Our results evidence that although the city of Barcelona broadly shows a homogeneous distribution of PM10 pollution sources, non-exhaust traffic, exhaust traffic and local urban industrial activities are major coarse PM10 aerosol sources.

  20. A Nisin Bioassay Based on Bioluminescence

    PubMed Central

    Wahlström, G.; Saris, P. E. J.

    1999-01-01

    A Lactococcus lactis subsp. lactis strain that can sense the bacteriocin nisin and transduce the signal into bioluminescence was constructed. By using this strain, a bioassay based on bioluminescence was developed for quantification of nisin, for detection of nisin in milk, and for identification of nisin-producing strains. As little as 0.0125 ng of nisin per ml was detected within 3 h by this bioluminescence assay. This detection limit was lower than in previously described methods. PMID:10427078

  1. Dynamical Downscaling of Meteorology from a Global Model by WRF towards Resolving US PM2.5 Distributions for the Mid 21st Century

    NASA Astrophysics Data System (ADS)

    Kunwar, S.; Bowden, J.; Milly, G.; Previdi, M. J.; Fiore, A. M.; West, J. J.

    2017-12-01

    In the coming decades, anthropogenically induced climate change will likely impact PM2.5 through both changing meteorology and feedback in natural emissions. A major goal of our project is to assess changes in PM2.5 levels over the continental US due to climate variability and change for the period 2005-2065. We will achieve this by using regional models to dynamically downscale coarse resolution (20 × 20) meteorology and air chemistry from a global model to finer spatial resolution (12 km), improving air quality projections for regions and subregions of the US (NE, SE, SW, NW, Midwest, Intermountain West). We downscale from GFDL CM3 simulations of the RCP8.5 scenario for the years 2006-2100 with aerosol and ozone precursor emissions fixed at 2005 levels. We carefully select model years from the global simulations that sample the range of PM2.5 distributions for different US regions at mid 21st century (2050-2065). Here we will show results for the meteorological downscaling (using WRF version 3.8.1) for this project, including a performance evaluation for meteorological variables with respect to the global model. In the future, the downscaled meteorology presented here will be used to drive air quality downscaling in CMAQ (version 5.2). Analysis of the resulting PM2.5 statistics for US regions, as well as the drivers for PM2.5 changes, will be important in supporting informed policies for air quality (also health and visibility) planning for different US regions for the next five decades.

  2. Coarse-Grained Models for Automated Fragmentation and Parametrization of Molecular Databases.

    PubMed

    Fraaije, Johannes G E M; van Male, Jan; Becherer, Paul; Serral Gracià, Rubèn

    2016-12-27

    We calibrate coarse-grained interaction potentials suitable for screening large data sets in top-down fashion. Three new algorithms are introduced: (i) automated decomposition of molecules into coarse-grained units (fragmentation); (ii) Coarse-Grained Reference Interaction Site Model-Hypernetted Chain (CG RISM-HNC) as an intermediate proxy for dissipative particle dynamics (DPD); and (iii) a simple top-down coarse-grained interaction potential/model based on activity coefficient theories from engineering (using COSMO-RS). We find that the fragment distribution follows Zipf and Heaps scaling laws. The accuracy in Gibbs energy of mixing calculations is a few tenths of a kilocalorie per mole. As a final proof of principle, we use full coarse-grained sampling through DPD thermodynamics integration to calculate log P OW for 4627 compounds with an average error of 0.84 log unit. The computational speeds per calculation are a few seconds for CG RISM-HNC and a few minutes for DPD thermodynamic integration.

  3. 40 CFR Table F-4 to Subpart F of... - Estimated Mass Concentration Measurement of PM2.5 for Idealized Coarse Aerosol Size Distribution

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 5 2010-07-01 2010-07-01 false Estimated Mass Concentration... Equivalent Methods for PM2.5 Pt. 53, Subpt. F, Table F-4 Table F-4 to Subpart F of Part 53—Estimated Mass... (µm) Test Sampler Fractional Sampling Effectiveness Interval Mass Concentration (µg/m3) Estimated Mass...

  4. 40 CFR Table F-4 to Subpart F of... - Estimated Mass Concentration Measurement of PM2.5 for Idealized Coarse Aerosol Size Distribution

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 5 2011-07-01 2011-07-01 false Estimated Mass Concentration... Equivalent Methods for PM2.5 Pt. 53, Subpt. F, Table F-4 Table F-4 to Subpart F of Part 53—Estimated Mass... (µm) Test Sampler Fractional Sampling Effectiveness Interval Mass Concentration (µg/m3) Estimated Mass...

  5. Quantum decimation in Hilbert space: Coarse graining without structure

    NASA Astrophysics Data System (ADS)

    Singh, Ashmeet; Carroll, Sean M.

    2018-03-01

    We present a technique to coarse grain quantum states in a finite-dimensional Hilbert space. Our method is distinguished from other approaches by not relying on structures such as a preferred factorization of Hilbert space or a preferred set of operators (local or otherwise) in an associated algebra. Rather, we use the data corresponding to a given set of states, either specified independently or constructed from a single state evolving in time. Our technique is based on principle component analysis (PCA), and the resulting coarse-grained quantum states live in a lower-dimensional Hilbert space whose basis is defined using the underlying (isometric embedding) transformation of the set of fine-grained states we wish to coarse grain. Physically, the transformation can be interpreted to be an "entanglement coarse-graining" scheme that retains most of the global, useful entanglement structure of each state, while needing fewer degrees of freedom for its reconstruction. This scheme could be useful for efficiently describing collections of states whose number is much smaller than the dimension of Hilbert space, or a single state evolving over time.

  6. Coarse woody debris: Managing benefits and fire hazard in the recovering forest

    Treesearch

    James K. Brown; Elizabeth D. Reinhardt; Kylie A. Kramer

    2003-01-01

    Management of coarse woody debris following fire requires consideration of its positive and negative values. The ecological benefits of coarse woody debris and fire hazard considerations are summarized. This paper presents recommendations for desired ranges of coarse woody debris. Example simulations illustrate changes in debris over time and with varying management....

  7. Constructing Optimal Coarse-Grained Sites of Huge Biomolecules by Fluctuation Maximization.

    PubMed

    Li, Min; Zhang, John Zenghui; Xia, Fei

    2016-04-12

    Coarse-grained (CG) models are valuable tools for the study of functions of large biomolecules on large length and time scales. The definition of CG representations for huge biomolecules is always a formidable challenge. In this work, we propose a new method called fluctuation maximization coarse-graining (FM-CG) to construct the CG sites of biomolecules. The defined residual in FM-CG converges to a maximal value as the number of CG sites increases, allowing an optimal CG model to be rigorously defined on the basis of the maximum. More importantly, we developed a robust algorithm called stepwise local iterative optimization (SLIO) to accelerate the process of coarse-graining large biomolecules. By means of the efficient SLIO algorithm, the computational cost of coarse-graining large biomolecules is reduced to within the time scale of seconds, which is far lower than that of conventional simulated annealing. The coarse-graining of two huge systems, chaperonin GroEL and lengsin, indicates that our new methods can coarse-grain huge biomolecular systems with up to 10,000 residues within the time scale of minutes. The further parametrization of CG sites derived from FM-CG allows us to construct the corresponding CG models for studies of the functions of huge biomolecular systems.

  8. Mechanical response of two polyimides through coarse-grained molecular dynamics simulations

    NASA Astrophysics Data System (ADS)

    Sudarkodi, V.; Sooraj, K.; Nair, Nisanth N.; Basu, Sumit; Parandekar, Priya V.; Sinha, Nishant K.; Prakash, Om; Tsotsis, Tom

    2018-03-01

    Coarse-grained molecular dynamics (MD) simulations allow us to predict the mechanical responses of polymers, starting merely with a description of their molecular architectures. It is interesting to ask whether, given two competing molecular architectures, coarse-grained MD simulations can predict the differences that can be expected in their mechanical responses. We have studied two crosslinked polyimides PMR15 and HFPE52—both used in high- temperature applications—to assess whether the subtle differences in their uniaxial stress-strain responses, revealed by experiments, can be reproduced by carefully coarse-grained MD models. The coarse graining procedure for PMR15 is outlined in this work, while the coarse grain forcefields for HFPE52 are borrowed from an earlier one (Pandiyan et al 2015 Macromol. Theory Simul. 24 513-20). We show that the stress-strain responses of both these polyimides are qualitatively reproduced, and important insights into their deformation and failure mechanisms are obtained. More importantly, the differences in the molecular architecture between the polyimides carry over to the differences in the stress-strain responses in a manner that parallels the experimental results. A critical assessment of the successes and shortcomings of predicting mechanical responses through coarse-grained MD simulations has been made.

  9. Minimum Detectable Dose as a Measure of Bioassay Programme Capability

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carbaugh, Eugene H.

    2003-01-01

    This paper suggests that minimum detectable dose (MDD) be used to describe the capability of bioassay programs for which intakes are expected to be rare. This allows expression of the capability in units that correspond directly to primary dose limits. The concept uses the well-established analytical statistic minimum detectable amount (MDA) as the starting point and assumes MDA detection at a prescribed time post intake. The resulting dose can then be used as an indication of the adequacy or capability of the program for demonstrating compliance with the performance criteria. MDDs can be readily tabulated or plotted to demonstrate themore » effectiveness of different types of monitoring programs. The inclusion of cost factors for bioassay measurements can allow optimisation.« less

  10. Characterization of Size-Fractionated Airborne Particles Inside an Electronic Waste Recycling Facility and Acute Toxicity Testing in Mice.

    PubMed

    Kim, Yong Ho; Wyrzykowska-Ceradini, Barbara; Touati, Abderrahmane; Krantz, Q Todd; Dye, Janice A; Linak, William P; Gullett, Brian; Gilmour, M Ian

    2015-10-06

    Disposal of electronic waste (e-waste) in landfills, incinerators, or at rudimentary recycling sites can lead to the release of toxic chemicals into the environment and increased health risks. Developing e-waste recycling technologies at commercial facilities can reduce the release of toxic chemicals and efficiently recover valuable materials. While these e-waste operations represent a vast improvement over previous approaches, little is known about environmental releases, workplace exposures, and potential health impacts. In this study, airborne particulate matter (PM) was measured at various locations within a modern U.S.-based e-waste recycling facility that utilized mechanical processing. In addition, composite size fractionated PM (coarse, fine and ultrafine) samples were collected, extracted, chemically analyzed, and given by oropharyngeal aspiration to mice or cultured with lung slices for lung toxicity tests. Indoor total PM concentrations measured during the study ranged from 220 to 1200 μg/m(3). In general, the coarse PM (2.5-10 μm) was 3-4 times more abundant than fine/ultrafine PM (<2.5 μm). The coarse PM contained higher levels of Ni, Pb, and Zn (up to 6.8 times) compared to the fine (0.1-2.5 μm) and ultrafine (<0.1 μm) PM. Compared to coarse PM measurements from a regional near-roadway study, Pb and Ni were enriched 170 and 20 times, respectively, in the indoor PM, with other significant enrichments (>10 times) observed for Zn and Sb, modest enrichments (>5 times) for Cu and Sr, and minor enrichments (>2 times) for Cr, Cd, Mn, Ca, Fe, and Ba. Negligible enrichment (<2 times) or depletion (<1 time) were observed for Al, Mg, Ti, Si, and V. The coarse PM fraction elicited significant pro-inflammatory responses in the mouse lung at 24 h postexposure compared to the fine and ultrafine PM, and similar toxicity outcomes were observed in the lung slice model. We conclude that exposure to coarse PM from the facility caused substantial inflammation in the

  11. Two-photon excitation fluorescence bioassays.

    PubMed

    Hänninen, Pekka; Soukka, Jori; Soini, Juhani T

    2008-01-01

    Application of two-photon excitation of fluorescence in microscopy is one of the major discoveries of the "renaissance" of light microscopy that started in the 1980s. The technique derives its advantages from the biologically "smooth" wavelength of the excitation light and the confinement of the excitation. Difficult, and seemingly nontransparent, samples may be imaged with the technique with good resolution. Although the bioresearch has been concentrating mostly on the positive properties of the technique for imaging, the same properties may be applied successfully to nonimaging bioassays. This article focuses on the development path of two-photon excitation-based assay system.

  12. Concentration characteristics of extractable organohalogens in PM2.5 and PM10 in Beijing, China

    NASA Astrophysics Data System (ADS)

    Xu, Diandou; Dan, Mo; Song, Yan; Chai, Zhifang; Zhuang, Guoshun

    PM2.5 and PM10 samples were simultaneously collected at a downtown site in Beijing from May 2002 to April 2003 and analyzed by instrumental neutron activation analysis (INAA) and gas chromatography (GC) combined with organic solvent extraction method for the concentrations and distributions of extractable organohalogens (EOX), including extractable organo-chlorine (EOCl), -bromine (EOBr) and -iodine compounds (EOI), and organochlorinated pesticides (OCPs) and polychlorinated biphenyls (PCBs). The concentrations of EOX were increasing in the order of EOCl≫EOBr˜EOI. EOCl accounted for 73-88% and 69-91% of EOX in PM2.5 and PM10, respectively, suggesting that EOCl was the major component of the organohalogens in the atmosphere. The relative proportions of the known organochlorines (such as HCHs, DDTs, chlordanes, and PCBs) to total EOCl were 0.04-0.7% and 0.06-0.3% in PM2.5 and PM10, respectively, which implied that most of EOCl measured in aerosol was unknown. The ratios of α/γ-HCH (0.9-1.5) and p,p'-DDE+DDD/ p,p'-DDT (0.2-0.5) revealed the presence of the recent use of lindane and DDTs or impure dicofol in Beijing. In the plots of the logarithm of the OCPs concentrations versus reciprocal temperature (1/T), their linear relations were observed for PM2.5, which could be partly explained by temperature differences, but poor linearity for PM10.

  13. Local PM10 and PM2.5 emission inventories from agricultural tillage and harvest in northeastern China.

    PubMed

    Chen, Weiwei; Tong, Daniel Q; Zhang, Shichun; Zhang, Xuelei; Zhao, Hongmei

    2017-07-01

    Mineral particles or particulate matters (PMs) emitted during agricultural activities are major recurring sources of atmospheric aerosol loading. However, precise PM inventory from agricultural tillage and harvest in agricultural regions is challenged by infrequent local emission factor (EF) measurements. To understand PM emissions from these practices in northeastern China, we measured EFs of PM 10 and PM 2.5 from three field operations (i.e., tilling, planting and harvesting) in major crop production (i.e., corn and soybean), using portable real-time PM analyzers and weather station data. County-level PM 10 and PM 2.5 emissions from agricultural tillage and harvest were estimated, based on local EFs, crop areas and crop calendars. The EFs averaged (107±27), (17±5) and 26mg/m 2 for field tilling, planting and harvesting under relatively dry conditions (i.e., soil moisture <15%), respectively. The EFs of PM from field tillage and planting operations were negatively affected by topsoil moisture. The magnitude of PM 10 and PM 2.5 emissions from these three activities were estimated to be 35.1 and 9.8 kilotons/yr in northeastern China, respectively, of which Heilongjiang Province accounted for approximately 45%. Spatiotemporal distribution showed that most PM 10 emission occurred in April, May and October and were concentrated in the central regions of the northeastern plain, which is dominated by dryland crops. Further work is needed to estimate the contribution of agricultural dust emissions to regional air quality in northeastern China. Copyright © 2016. Published by Elsevier B.V.

  14. Requirements for radiation emergency urine bioassay techniques for the public and first responders.

    PubMed

    Li, Chunsheng; Vlahovich, Slavica; Dai, Xiongxin; Richardson, Richard B; Daka, Joseph N; Kramer, Gary H

    2010-11-01

    Following a radiation emergency, the affected public and the first responders may need to be quickly assessed for internal contamination by the radionuclides involved. Urine bioassay is one of the most commonly used methods for assessing radionuclide intake and radiation dose. This paper attempts to derive the sensitivity requirements (from inhalation exposure) for the urine bioassay techniques for the top 10 high-risk radionuclides that might be used in a terrorist attack. The requirements are based on a proposed reference dose to adults of 0.1 Sv (CED, committed effective dose). In addition, requirements related to sample turnaround time and field deployability of the assay techniques are also discussed. A review of currently available assay techniques summarized in this paper reveals that method development for ²⁴¹Am, ²²⁶Ra, ²³⁸Pu, and ⁹⁰Sr urine bioassay is needed.

  15. A survey on uncertainty in bioassay measurements carried out within the OMINEX project.

    PubMed

    Hurtgen, C; Cossonnet, C

    2003-01-01

    One of the topics covered by the OMINEX (Optimisation of Monitoring for Internal Exposure) project was to look at the bioassay measurements performed in the European laboratories. Questionnaires on bioassay measurements by alpha spectrometry or inductively coupled plasma-mass spectrometry (ICP-MS) were sent to European laboratories. The main objective was to collect information on analytical procedures and on the uncertainties associated with bioassay results. Alpha spectrometry is the technique most often used for the determination of alpha emitters, such as actinides in biological samples. ICP-MS is not used much as yet for routine measurements of actinides in biological samples, but is very sensitive for measurements of long-lived radionuclides. The different parameters influencing the uncertainties on the results and the minimum detectable amount have been investigated. Optimum conditions for achieving low result uncertainties and high sensitivity are given for alpha spectrometry and ICP-MS.

  16. Contamination characteristics and possible sources of PM10 and PM2.5 in different functional areas of Shanghai, China

    NASA Astrophysics Data System (ADS)

    Wang, Jun; Hu, Zimei; Chen, Yuanyuan; Chen, Zhenlou; Xu, Shiyuan

    2013-04-01

    From July 2009 through September 2010, PM10 and PM2.5 were collected at two different functional areas in Shanghai (Baoshan district, an industrial area, and Putuo district, a mixed-use area of residential, commercial, and educational compounds). In our analysis, 15 elements were determined using a 710-ES Inductively Coupled Plasma-Emission Spectrometer (ICP-AES). The contents of PM2.5, PM10, and metal elements at the two different sites were comparatively analyzed. The results show that the mean annual concentrations of PM10 and PM2.5 (149.22 μg m-3 and 103.07 μg m-3, respectively) in Baoshan district were significantly higher than those in Putuo district (97.44 μg m-3 and 62.25 μg m-3 respectively). The concentrations of PM10 and PM2.5 were both greatest in winter and lowest in summer, with the two different sites exhibiting the same seasonal variation. It was found that the proportions of 15 metal elements in PM10 and PM2.5 in Baoshan district were 20.49% and 20.56%, respectively, while the proportions in Putuo district were higher (25.98% and 25.93%, respectively). In addition, the proportions of eight heavy metals in PM10 and PM2.5 were 5.50% and 3.07%, respectively, for Baoshan district, while these proportions in Putuo district were 3.18% and 2.77%, respectively, indicating that heavy metal pollution is more pronounced in Baoshan district. Compared with cities in developed countries, the total levels of PM10, PM2.5 and heavy metals in Shanghai were slightly higher. Scanning electron microscopy (SEM) and principal component analysis (PCA) suggested that the possible sources of PM10 in Baoshan district were ground level fugitive dust, traffic sources, and industrial activities, whereas PM2.5 mainly originated from industrial activities, coal combustion, and traffic sources. The sources are same for PM10 and PM2.5 in Putuo region, which originate from traffic sources and ground level fugitive dust.

  17. Source apportionment studies on particulate matter (PM10 and PM2.5) in ambient air of urban Mangalore, India.

    PubMed

    Kalaiarasan, Gopinath; Balakrishnan, Raj Mohan; Sethunath, Neethu Anitha; Manoharan, Sivamoorthy

    2018-07-01

    Particulate matter (PM 10 and PM 2.5 ) samples were collected from six sites in urban Mangalore and the mass concentrations for PM 10 and PM 2.5 were measured using gravimetric technique. The measurements were found to exceed the national ambient air quality standards (NAAQS) limits, with the highest concentration of 231.5 μg/m 3 for PM 10 particles at Town hall and 120.3 μg/m 3 for PM 2.5 particles at KMC Attavar. The elemental analysis using inductively coupled plasma optical emission spectrophotometer (ICPOES) revealed twelve different elements (As, Ba, Cd, Cr, Cu, Fe, Mg, Mn, Mo, Ni, Sr and Zn) for PM 10 particles and nine different elements (Ba, Cd, Cr, Cu, Fe, Mn, Ni, Pb, Sr and Zn) for PM 2.5 particles. Similarly, ionic composition of these samples measured by ion chromatography (IC) divulged nine different ions (F - , Cl - , NO 3 - , PO 4 3- , SO 4 2- , Na + , K + , Mg 2+ and Ca 2+ ) for PM 10 particles and ten different ions (F - , Cl - , NO 3 - , PO 4 3- , SO 4 2- , Na + , NH 4 + , K + , Mg 2+ and Ca 2+ ) for PM 2.5 particles. The source apportionment study of PM 10 and PM 2.5 for urban Mangalore in accordance with these six sample sites using chemical mass balance model (CMBv8.2) revealed nine and twelve predominant contributors for both PM 10 and PM 2.5 , respectively. The highest contributor of PM 10 was found to be paved road dust followed by diesel and gasoline vehicle emissions. Correspondingly, PM 2.5 was found to be contributed mainly from two-wheeler vehicle emissions followed by four-wheeler and heavy vehicle emissions (diesel vehicles). The current study depicts that the PM 10 and PM 2.5 in ambient air of Mangalore region has 70% of its contribution from vehicular emissions (both exhaust and non-exhaust). Copyright © 2018 Elsevier Ltd. All rights reserved.

  18. Fast coarse-fine locating method for φ-OTDR.

    PubMed

    Mei, Xuanwei; Pang, Fufei; Liu, Huanhuan; Yu, Guoqin; Shao, Yuying; Qian, Tianyu; Mou, Chengbo; Lv, Longbao; Wang, Tingyun

    2018-02-05

    We proposed and demonstrated a coarse-fine method to achieve fast locating of external vibration for the phase-sensitive optical time-domain reflectometer (φ-OTDR) sensing system. Firstly, the acquired backscattered traces from heterodyne coherent φ-OTDR systems are spatially divided into a few segments along a sensing fiber for coarse locating, and most of the acquired data can be excluded by comparing the phase difference between the endpoints in adjacent segments. Secondly, the amplitude-based locating is implemented within the target segments for fine locating. By using the proposed coarse-fine locating method, we have numerically and experimentally investigated a distributed vibration sensor based on the heterodyne coherent φ-OTDR system with a 50-km-long sensing fiber. We find that the computation cost of signal processing for locating is significantly reduced in the long-haul sensing fiber, showing a potential application in real-time locating of external vibration.

  19. The decomposition of fine and coarse roots: their global patterns and controlling factors

    PubMed Central

    Zhang, Xinyue; Wang, Wei

    2015-01-01

    Fine root decomposition represents a large carbon (C) cost to plants, and serves as a potential soil C source, as well as a substantial proportion of net primary productivity. Coarse roots differ markedly from fine roots in morphology, nutrient concentrations, functions, and decomposition mechanisms. Still poorly understood is whether a consistent global pattern exists between the decomposition of fine (<2 mm root diameter) and coarse (≥2 mm) roots. A comprehensive terrestrial root decomposition dataset, including 530 observations from 71 sampling sites, was thus used to compare global patterns of decomposition of fine and coarse roots. Fine roots decomposed significantly faster than coarse roots in middle latitude areas, but their decomposition in low latitude regions was not significantly different from that of coarse roots. Coarse root decomposition showed more dependence on climate, especially mean annual temperature (MAT), than did fine roots. Initial litter lignin content was the most important predictor of fine root decomposition, while lignin to nitrogen ratios, MAT, and mean annual precipitation were the most important predictors of coarse root decomposition. Our study emphasizes the necessity of separating fine roots and coarse roots when predicting the response of belowground C release to future climate changes. PMID:25942391

  20. Resistance monitoring of Heliothis virescens to pyramided cotton varieties with a hydrateable, artificial cotton leaf bioassay

    USDA-ARS?s Scientific Manuscript database

    Proof of concept was demonstrated for a practical, off the shelf bioassay to monitor for tobacco budworm resistance to pyramided Bt cotton using plant eluants. The bioassay was based on a previously described feeding disruption test using hydrateable artificial diet containing a blue indicator dye, ...

  1. Characterization of short- and medium-chain chlorinated paraffins in outdoor/indoor PM10/PM2.5/PM1.0 in Beijing, China.

    PubMed

    Huang, Huiting; Gao, Lirong; Xia, Dan; Qiao, Lin; Wang, Runhua; Su, Guijin; Liu, Wenbin; Liu, Guorui; Zheng, Minghui

    2017-06-01

    Persistent organic pollutants (POPs) were listed in the Stockholm Convention, because of their adverse health effects, persistence, bioaccumulation and ubiquitous presence in the environment. Short chain chlorinated paraffins (SCCPs), chlorinated derivatives of n-alkanes, have been listed as candidate POPs under Stockholm Convention. Inhalation uptake was an important exposure pathway for non-occupational adult human and the pollution of particle matter has caused great concern. There are some studies focused on POPs such as polychlorinated biphenyls, polychlorinated dibenzo-p-dioxins and dibenzofurans and polybrominated diphenyl ethers in different size particles. However, there were no studies that discussed CP concentrations in particulate matter (PM) with different sizes. In this study, a total of 30 PM samples were collected both outdoors and indoors at a sampling site in Beijing. These samples were used to investigate the concentrations and distributions of SCCPs and medium chain chlorinated paraffins (MCCPs) in PM fractions of different sizes, and to evaluate inhalation exposure risks. The results showed that the average SCCPs and MCCPs in the outdoor PM 10 were 23.9 and 3.6 ng m -3 , while the mean values in indoor were 61.1 and 6.9 ng m -3 , respectively. The levels of SCCPs and MCCPs in indoor and outdoor were relatively high. SCCP and MCCP concentrations in the indoor PM 10 /PM 2.5 /PM 1.0 samples were higher than the corresponding values in the outdoor, because of the using of some products containing CPs in the indoors, like paints and coatings, leather and rubber products. In both outdoor and indoor air, CPs are mainly associated with particles ≤2.5 μm in diameter. The main homolog groups for both SCCPs and MCCPs were C 10-11 Cl 7-8 . It is assumed that SCCPs in the outdoor and indoor PM samples may mainly derive from the production and use of CP-42 and CP-52. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. Utilization of a duckweed bioassay to evaluate leaching of heavy metals in smelter contaminated soils

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Youngman, A.L.; Lydy, M.J.; Williams, T.L.

    1998-12-31

    The purpose of this study was to determine whether a duckweed bioassay could be used to evaluate the downward migration of heavy metals in smelter soils. The duckweed bioassay was initially used to evaluate elutriates prepared from samples of smelter soils. These initial tests verified that the elutriates would elicit toxic responses. Elutriate testing was followed with an evaluation of leachate from untreated soil cores or soil cores that had been amended with organic matter either unplanted or planted to a grass-forb seed mixture. There was an inverse linear relationship between heavy-metal concentrations in leachate and NOEC and IC{sub 50}more » values expressed as percentages among all soil cores. Based on these preliminary duckweed bioassays, there were no differences between soil types or organic amended or non-amended soil, but leachate from vegetated soil cores were less toxic than were leachates from non-vegetated soil cores. Overall, the duckweed bioassays were useful in detecting heavy metal availability in elutriate and leachate samples from smelter soils.« less

  3. Main components and human health risks assessment of PM10, PM2.5, and PM1 in two areas influenced by cement plants

    NASA Astrophysics Data System (ADS)

    Sánchez-Soberón, Francisco; Rovira, Joaquim; Mari, Montse; Sierra, Jordi; Nadal, Martí; Domingo, José L.; Schuhmacher, Marta

    2015-11-01

    Particulate matter (PM) is widely recorded as a source of diseases, being more harmful those particles with smaller size. PM is released to the environment as a consequence of different activities, being one of them cement production. The objective of this pilot study was to characterize PM of different sizes around cement facilities to have a preliminary approach of their origin, and evaluate their potential health risks. For that purpose, three fractions of PM (10, 2.5, and 1) were collected in the nearby area of two cement plants with different backgrounds (urban and rural) in different seasons. Subsequently, main components, outdoor and indoor concentrations, exposure, and human health risks were assessed. Greatest levels of PM1, organic matter, and metals were found in urban location, especially in winter. Consequently, environmental exposure and human health risks registered their highest values in the urban plant during wintertime. Exposure was higher for indoor activities, expressing some metals their peak values in the PM1 fraction. Non-carcinogenic risks were below the safety threshold (HQ < 1). Carcinogenic risks for most of the metals were below the limit of 10-5, except for Cr (VI), which exceeded it in both locations, but being in the range considered as assumable (10-6-10-4).

  4. Systematic and simulation-free coarse graining of homopolymer melts: a relative-entropy-based study.

    PubMed

    Yang, Delian; Wang, Qiang

    2015-09-28

    We applied the systematic and simulation-free strategy proposed in our previous work (D. Yang and Q. Wang, J. Chem. Phys., 2015, 142, 054905) to the relative-entropy-based (RE-based) coarse graining of homopolymer melts. RE-based coarse graining provides a quantitative measure of the coarse-graining performance and can be used to select the appropriate analytic functional forms of the pair potentials between coarse-grained (CG) segments, which are more convenient to use than the tabulated (numerical) CG potentials obtained from structure-based coarse graining. In our general coarse-graining strategy for homopolymer melts using the RE framework proposed here, the bonding and non-bonded CG potentials are coupled and need to be solved simultaneously. Taking the hard-core Gaussian thread model (K. S. Schweizer and J. G. Curro, Chem. Phys., 1990, 149, 105) as the original system, we performed RE-based coarse graining using the polymer reference interaction site model theory under the assumption that the intrachain segment pair correlation functions of CG systems are the same as those in the original system, which de-couples the bonding and non-bonded CG potentials and simplifies our calculations (that is, we only calculated the latter). We compared the performance of various analytic functional forms of non-bonded CG pair potential and closures for CG systems in RE-based coarse graining, as well as the structural and thermodynamic properties of original and CG systems at various coarse-graining levels. Our results obtained from RE-based coarse graining are also compared with those from structure-based coarse graining.

  5. NONLINEAR MULTIGRID SOLVER EXPLOITING AMGe COARSE SPACES WITH APPROXIMATION PROPERTIES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Christensen, Max La Cour; Villa, Umberto E.; Engsig-Karup, Allan P.

    The paper introduces a nonlinear multigrid solver for mixed nite element discretizations based on the Full Approximation Scheme (FAS) and element-based Algebraic Multigrid (AMGe). The main motivation to use FAS for unstruc- tured problems is the guaranteed approximation property of the AMGe coarse spaces that were developed recently at Lawrence Livermore National Laboratory. These give the ability to derive stable and accurate coarse nonlinear discretization problems. The previous attempts (including ones with the original AMGe method, [5, 11]), were less successful due to lack of such good approximation properties of the coarse spaces. With coarse spaces with approximation properties, ourmore » FAS approach on un- structured meshes should be as powerful/successful as FAS on geometrically re ned meshes. For comparison, Newton's method and Picard iterations with an inner state-of-the-art linear solver is compared to FAS on a nonlinear saddle point problem with applications to porous media ow. It is demonstrated that FAS is faster than Newton's method and Picard iterations for the experiments considered here. Due to the guaranteed approximation properties of our AMGe, the coarse spaces are very accurate, providing a solver with the potential for mesh-independent convergence on general unstructured meshes.« less

  6. Scrubchem: Building Bioactivity Datasets from Pubchem Bioassay Data (SOT)

    EPA Science Inventory

    The PubChem Bioassay database is a non-curated public repository with data from 64 sources, including: ChEMBL, BindingDb, DrugBank, EPA Tox21, NIH Molecular Libraries Screening Program, and various other academic, government, and industrial contributors. Methods for extracting th...

  7. Bioassay techniques for detecting root leakage of auxinic herbicides

    USDA-ARS?s Scientific Manuscript database

    Biological assay (bioassay) techniques are a simple way to determine the presence of herbicides in soil or other potting media. Understanding the fate of herbicides after absorption is important when guidelines for use are developed. Greenhouse studies were conducted with the herbicide aminocyclopyr...

  8. Bioassay of formulations of Bacillus thuringiensis for use in forestry: panel discussion of the role of the bioassay in standardizing formulations of B. thuringiensis

    Treesearch

    H. T. Dulmage; C. C. Beegle; N. R. Dubois

    1985-01-01

    The panel discussed various aspects of Bacillus thuringiensis formulations and fermentations and concluded that the only means at present of standardizing these formulations or discovering more potent strains of the Bacillus is through carefully controlled bioassays.

  9. Estimation of PM2.5 and PM10 using ground-based AOD measurements during KORUS-AQ campaign

    NASA Astrophysics Data System (ADS)

    Koo, J. H.; Kim, J.; Kim, S.; Go, S.; Lee, S.; Lee, H.; Mok, J.; Hong, J.; Lee, J.; Eck, T. F.; Holben, B. N.

    2017-12-01

    During the KORUS-AQ campaign (2 May - 12 June, 2016), aerosol optical depth (AOD) was obtained at multiple channels using various ground-based instruments at Yonsei University, Seoul: AERONET sunphotometer, SKYNET skyradiometer, Brewer spectrophotometer, and multi-filter rotating shadowband radiometer (MFRSR). At the same location, planetary boundary layer (PBL) height and vertical profile of backscattering coefficients also can be obtained based on the celiometer measurements. Using celiometer products and various AODs, we try to estimate the amount of particular matter (PM2.5 and PM10) and validate with in-situ surface PM2.5 and PM10 measurements from AIRKOREA network. Direct comparison between PM2.5 and AOD reveals that the ultraviolet(UV) channel AOD has better correlations, due to the higher sensitivity of short wavelength to the fine-mode particle. In contrast, PM10 shows the highest correlation with the near-infrared(NIR) AOD. Next, we extract the boundary-layer portion of AOD using either PBL height or vertical profile of backscattering coefficients to compare with PM2.5 and PM10. Both results enhance the correlation, but consideration of weighting factor calculated from backscattering coefficients shows larger contribution to the correlation increase. Finally, we performed the multiple linear regression to estimate PM2.5 and PM10 using AODs. Consideration of meteorology (temperature, wind speed, and relative humidity) can enhance the correlation and also O3 and NO2 consideration highly contributes to the high correlation. This finding implies the importance to consider the ambient condition of secondary aerosol formation related to the PM2.5 variation. Multiple regression model finally finds the correlation 0.7-0.8, and diminishes the wavelength-dependent correlation patterns.

  10. Responses of lone star tick (acari: ixodidae) nymphs to the repellent deet applied in acetone and ethanol solutions in vitro bioassays

    USDA-ARS?s Scientific Manuscript database

    Behavioral bioassays remain a standard tool in the discovery, development, and registration of repellents. Although tick repellent bioassays tend to be rather uncomplicated, several factors can influence their outcomes. Typically repellent bioassays use a solvent, such as acetone or ethanol, to disp...

  11. Bioassay of 4'-(chloroacetyl)-acetanilide for possible carcinogenicity.

    PubMed

    1979-01-01

    A bioassay for the possible carcinogenicity of 4'-(chloroacetyl)-acetanilide was conducted using Fischer 344 rats and B6C3F1 mice. 4'-(Chloroacetyl)-acetanilide was administered in the feed, at either of two concentrations, to groups of 50 male and 50 female animals of each species. Twenty animals of each sex and species were placed on test as controls. The high and low dietary concentrations of 4'-(chloroacetyl)-acetanilide were, respectively, 2,000 and 1,000 ppm for rats and 10,000 and 5,000 ppm for mice. The compound was administered for 87 weeks of a 102-week period in rats and for 90 weeks of a 105-week period in mice. Mice were killed at the end of the last week of compound administration, while rats were observed for 1 week after compound administration ceased. There were no significant positive associations between the concentration of 4'-(chloroacetyl)-acetanilide administered and mortality in rats or mice of either sex. Adequate numbers of animals in all groups survived sufficiently long to be at risk from late-developing tumors. Dose-related mean body weight depression was observed for males and females of both species, indicating that the concentrations of 4'-(chloroacetyl)-acetanilide administered to the animals in this bioassay may have approximated the maximum tolerated concentrations. None of the statistical tests for any site in rats of either sex or in male mice indicated a significant positive association between compound administration and tumor incidence. Although there was a significant positive association between the concentration of the compound administered and the incidences of hepatocellular adenomas in female mice, the Fischer exact comparisons were not significant. Under the conditions of this bioassay, 4'-(chloroacetyl)-acetanilide was not carcinogenic when administered in the diet to Fischer 344 rats or B6C3F1 mice of either sex.

  12. Mouse lung inflammation after instillation of particulate matter collected from a working dairy barn

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wegesser, Teresa C.; Last, Jerold A.

    Coarse and fine particulate matter (PM{sub 2.5-10} and PM{sub 2.5}, respectively) are regulated ambient air pollutants thought to have major adverse health effects in exposed humans. The role of endotoxin and other bioaerosol components in the toxicity of PM from ambient air is controversial. This study evaluated the inflammatory lung response in mice instilled intratracheally with PM{sub 2.5-10} and PM{sub 2.5} emitted from a working dairy barn, a source presumed to have elevated concentrations of endotoxin. PM{sub 2.5-10} was more pro-inflammatory on an equal weight basis than was PM{sub 2.5}; both fractions elicited a predominantly neutrophilic response. The inflammatory responsemore » was reversible, with a peak response to PM{sub 2.5-10} observed at 24 h after instillation, and a return to control values by 72 h after instillation. The major active pro-inflammatory component in whole PM{sub 2.5-10}, but not in whole PM{sub 2.5}, is heat-labile, consistent with it being endotoxin. A heat treatment protocol for the gradual inactivation of biological materials in the PM fractions over a measurable time course was developed and optimized in this study using pure lipopolysaccharide (LPS) as a model system. The time course of heat inactivation of pure LPS and of endotoxin activity in PM{sub 2.5-10} as measured by Limulus bioassay is identical. The active material in both PM{sub 2.5-10} and PM{sub 2.5} remained in the insoluble fraction when the whole PM samples were extracted with physiological saline solution. Histological analysis of lung sections from mice instilled with PM{sub 2.5-10} or PM{sub 2.5} showed evidence of inflammation consistent with the cellular responses observed in lung lavage fluid. The major pro-inflammatory components present in endotoxin-rich PM were found in the insoluble fraction of PM{sub 2.5-10}; however, in contrast with PM{sub 2.5-10} isolated from ambient air in the Central Valley of California, the active components in the insoluble

  13. Water quality bioassay using selected protozoa. I. [Paramecium candatum; Amoeba proteus; Euglena gracilis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mills, W.L.

    1976-01-01

    The suitability of certain species of protozoa as indicators of water quality has been determined. Experiments were conducted under laboratory conditions to standardize a bioassay procedure for water quality using either Paramecium caudatum, Amoeba proteus, or Euglena gracilis as the indicator organism. The bioassay, which consists of exposing the organisms to a known concentration of pollutant under laboratory conditions, followed by microscopic observation to establish the time of death, affords a reliable, convenient and inexpensive way to monitor for water quality.

  14. Fluorescent bioassays for toxic metals in milk and yoghurt.

    PubMed

    Siddiki, Mohammad Shohel Rana; Ueda, Shunsaku; Maeda, Isamu

    2012-10-25

    From a human health viewpoint, contaminated milk and its products could be a source of long-term exposure to toxic metals. Simple, inexpensive, and on-site assays would enable constant monitoring of their contents. Bioassays that can measure toxic metals in milk or yoghurt might reduce the risk. For this purpose, the green fluorescent protein (GFP)-tagged trans factors, ArsR-GFP and CadC-GFP, together with their cis elements were used to develop such bioassays. ArsR-GFP or CadC-GFP, which binds either toxic metal or DNA fragment including cis element, was directly mixed with cow's milk or yoghurt within a neutral pH range. The fluorescence of GFP, which is reflected by the association/dissociation ratio between cis element and trans factor, significantly changed with increasing externally added As (III) or Cd (II) whereas smaller responses to externally added Pb (II) and Zn (II) were found. Preparation and dilution of whey fraction at low pH were essential to intrinsic zinc quantification using CadC-GFP. Using the extraction procedure and bioassay, intrinsic Zn (II) concentrations ranging from 1.4 to 4.8 mg/l for milk brands and from 1.2 to 2.9 mg/kg for yoghurt brands were determined, which correlated to those determined using inductively coupled plasma atomic emission spectroscopy. GFP-tagged bacterial trans factors and cis elements can work in the neutralized whole composition and diluted whey fraction of milk and yoghurt. The feature of regulatory elements is advantageous for establishment of simple and rapid assays of toxic metals in dairy products.

  15. Biology of the Coarse Aerosol Mode: Insights Into Urban Aerosol Ecology

    NASA Astrophysics Data System (ADS)

    Dueker, E.; O'Mullan, G. D.; Montero, A.

    2015-12-01

    Microbial aerosols have been understudied, despite implications for climate studies, public health, and biogeochemical cycling. Because viable bacterial aerosols are often associated with coarse aerosol particles, our limited understanding of the coarse aerosol mode further impedes our ability to develop models of viable bacterial aerosol production, transport, and fate in the outdoor environment, particularly in crowded urban centers. To address this knowledge gap, we studied aerosol particle biology and size distributions in a broad range of urban and rural settings. Our previously published findings suggest a link between microbial viability and local production of coarse aerosols from waterways, waste treatment facilities, and terrestrial systems in urban and rural environments. Both in coastal Maine and in New York Harbor, coarse aerosols and viable bacterial aerosols increased with increasing wind speeds above 4 m s-1, a dynamic that was observed over time scales ranging from minutes to hours. At a New York City superfund-designated waterway regularly contaminated with raw sewage, aeration remediation efforts resulted in significant increases of coarse aerosols and bacterial aerosols above that waterway. Our current research indicates that bacterial communities in aerosols at this superfund site have a greater similarity to bacterial communities in the contaminated waterway with wind speeds above 4 m s-1. Size-fractionated sampling of viable microbial aerosols along the urban waterfront has also revealed significant shifts in bacterial aerosols, and specifically bacteria associated with coarse aerosols, when wind direction changes from onshore to offshore. This research highlights the key connections between bacterial aerosol viability and the coarse aerosol fraction, which is important in assessments of production, transport, and fate of bacterial contamination in the urban environment.

  16. Bioassay of Surface Quality/Chesapeake Bay, Maryland

    DTIC Science & Technology

    1995-02-01

    macroinvertebrate bioassay (Lenat, 1988 ; Resh, 1984). A simplified method, based on macroinvertebrates, has been developed for use by volunteer groups...338. ) Glcason, IHenry A . and A . Cronquist . 1963. ManualofVascular Plants of Northeastern United States S -- ’ and Adjacent Canada. New York Botanical...distribution unlimited The views, opinions and/or findings contained in this report arethose of the author( a ) and should not be construed as an official

  17. Coarse coding and discourse comprehension in adults with right hemisphere brain damage

    PubMed Central

    Tompkins, Connie A.; Scharp, Victoria L.; Meigh, Kimberly M.; Fassbinder, Wiltrud

    2009-01-01

    Background Various investigators suggest that some discourse-level comprehension difficulties in adults with right hemisphere brain damage (RHD) have a lexical-semantic basis. As words are processed, the intact right hemisphere arouses and sustains activation of a wide-ranging network of secondary or peripheral meanings and features—a phenomenon dubbed “coarse coding”. Coarse coding impairment has been postulated to underpin some prototypical RHD comprehension deficits, such as difficulties with nonliteral language interpretation, discourse integration, some kinds of inference generation, and recovery when a reinterpretation is needed. To date, however, no studies have addressed the hypothesised link between coarse coding deficit and discourse comprehension in RHD. Aims The current investigation examined whether coarse coding was related to performance on two measures of narrative comprehension in adults with RHD. Methods & Procedures Participants were 32 adults with unilateral RHD from cerebrovascular accident, and 38 adults without brain damage. Coarse coding was operationalised as poor activation of peripheral/weakly related semantic features of words. For the coarse coding assessment, participants listened to spoken sentences that ended in a concrete noun. Each sentence was followed by a spoken target phoneme string. Targets were subordinate semantic features of the sentence-final nouns that were incompatible with their dominant mental representations (e.g., “rotten” for apple). Targets were presented at two post-noun intervals. A lexical decision task was used to gauge both early activation and maintenance of activation of these weakly related semantic features. One of the narrative tasks assessed comprehension of implied main ideas and details, while the other indexed high-level inferencing and integration. Both comprehension tasks were presented auditorily. For all tasks, accuracy of performance was the dependent measure. Correlations were computed

  18. Levels of PM2.5/PM10 and associated metal(loid)s in rural households of Henan Province, China.

    PubMed

    Wu, Fuyong; Wang, Wei; Man, Yu Bon; Chan, Chuen Yu; Liu, Wenxin; Tao, Shu; Wong, Ming Hung

    2015-04-15

    Although a majority of China's rural residents use solid fuels (biomass and coal) for household cooking and heating, clean energy such as electricity and liquid petroleum gas is becoming more popular in the rural area. Unfortunately, both solid fuels and clean energy could result in indoor air pollution. Daily respirable particulate matter (PM≤10 μm) and inhalable particulate matter (PM≤2.5 μm) were investigated in kitchens, sitting rooms and outdoor area in rural Henan during autumn (Sep to Oct 2012) and winter (Jan 2013). The results showed that PM (PM2.5 and PM10) and associated metal(loid)s varied among the two seasons and the four types of domestic energy used. Mean concentrations of PM2.5 and PM10 in kitchens during winter were 59.2-140.4% and 30.5-145.1% higher than those during autumn, respectively. Similar with the trends of PM2.5 and PM10, concentrations of As, Pb, Zn, Cd, Cu, Ni and Mn in household PM2.5 and PM10 were apparently higher in winter than those in autumn. The highest mean concentrations of PM2.5 and PM10 (368.5 and 588.7 μg m(-3)) were recorded in sitting rooms in Baofeng during winter, which were 5.7 and 3.9 times of corresponding health based guidelines for PM2.5 and PM10, respectively. Using coal can result in severe indoor air pollutants including PM and associated metal(loid)s compared with using crop residues, electricity and gas in rural Henan Province. Rural residents' exposure to PM2.5 and PM10 would be roughly reduced by 13.5-22.2% and 8.9-37.7% via replacing coal or crop residues with electricity. The present study suggested that increased use of electricity as domestic energy would effectively improve indoor air quality in rural China. Copyright © 2015 Elsevier B.V. All rights reserved.

  19. Impact of Spodoptera frugiperda neonate pretreatment conditions on Vip3Aa19 insecticidal protein activity and laboratory bioassay variation.

    PubMed

    Da Silva, Karen F; Spencer, Terence A; Camargo Gil, Carolina; Siegfried, Blair D; Walters, Frederick S

    2016-04-01

    Variation in response to insecticidal proteins is common upon repetition of insect bioassays. Understanding this variation is a prerequisite to detecting biologically important differences. We tracked neonate Spodoptera frugiperda (J.E. Smith) susceptibility to Vip3Aa19 over 17 generations using standardized bioassay methods. Five larval pretreatment conditions and one bioassay condition were tested to determine whether susceptibility was affected. These included: storage time; prefeeding; storage at reduced temperature; storage at reduced humidity; colony introgression of field-collected individuals. Extremes of photoperiod during the bioassay itself were also examined. LC50 values for two strains of S. frugiperda varied 6.6-fold or 8.8-fold over 17 generations. Storage time and humidity had no impact on Vip3Aa19 susceptibility, whereas prefeeding significantly reduced subsequent mortality (by 27%). Storage at reduced temperature increased mortality for one colony (from 45.6 to 73.0%) but not for the other. Introgression of field-collected individuals affected susceptibility at the first generation but not for subsequent generations. A 24 h bioassay photophase significantly reduced susceptibility (by 26%) for both colonies. Certain pretreatment and bioassay conditions were identified that can affect S. frugiperda Vip3Aa19 susceptibility, but innate larval heterogeneity was also present. Our observations should help to increase the consistency of insecticidal protein bioassay results. © 2015 Syngenta Crop Protection, LLC. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

  20. Variability of fine and coarse aerosol over the Western Mediterranean Basin during the Minerva 2015 research cruise campaign

    NASA Astrophysics Data System (ADS)

    Castagna, Jessica; Carbone, Francesco; Naccarato, Attilio; Moretti, Sacha; Esposito, Giulio; Bencardino, Mariantonia; D'Amore, Francesco; Sprovieri, Francesca; Pirrone, Nicola

    2016-04-01

    The Mediterranean Basin, due to its semi-enclosed configuration, is heavily affected by air pollution and it is becoming, in the last years, a region of particular interest of study for its implications regarding both health effects and environmental impacts. The area is surrounded by a densely populated as well as industrialized coast, and even affected by natural sources. So, it is important to know how the various sources contributes to increase air pollution levels and discriminate among them. With special regard to aerosol pollution, natural sources, like Saharan dust, volcanoes, and fires, as well as anthropogenic sources, such as industry, road and marine traffic, and fuel combustion from heating, can equally increase the values of this dangerous pollutant. While on the land we can find numerous monitoring sites, there are not continuous measurements on the sea. For this reason, since 2000 the Institute of Atmospheric Pollution of the National Research Council (CNR-IIA) is conducting regular oceanographic campaigns of measurements in the Mediterranean Sea. In this context, here we report the results obtained during the last cruise campaign, which took place in the Western Mediterranean sector and was conducted on-board the Italian research vessel Minerva during summer 2015 (from June 27th to July 13th). Fine (PM2.5) and Coarse (PM2.5-10) particulate size fractions were collected on PTFE membrane filters (Advantec MFS) and their mass concentrations determined gravimetrically. Successively, all the filters were digested with a mixture of HNO3/H2O2 in an microwaves digestion system and then analyzed by ICP-MS for the determination of the major and trace elements. Outcomes regarding the particulate mass concentration, the content and the distribution of the analyzed elements over both PM size fractions will be discussed taking into account potential contributing sources as well as different meteorological conditions.

  1. Variability of levels and composition of PM10 and PM2.5 in the Barcelona metro system

    NASA Astrophysics Data System (ADS)

    Querol, X.; Moreno, T.; Karanasiou, A.; Reche, C.; Alastuey, A.; Viana, M.; Font, O.; Gil, J.; de Miguel, E.; Capdevila, M.

    2012-03-01

    From an environmental perspective, the underground metro system is one of the cleanest forms of public transportation in urban agglomerations. Current studies report contradicting results regarding air quality in the metro systems: whereas some reveal poor air quality, others report PM levels which are lower or of the same order of magnitude than those measured in traffic sites above ground level. The present work assesses summer indoor air quality and passenger exposure in the Barcelona metro, focusing on PM levels and their metal contents. In addition, the impact on indoor air quality of platform screen door systems (automated systems consisting of closed rail track and platforms) is evaluated, to determine whether these systems reduce passenger exposure to PM when compared with conventional systems (open tracks and platforms). In the Barcelona metro, PM levels inside the trains in summer are amongst the lowest reported for worldwide metro systems (11-32 μPM2.5 m-3). This is most probably due to the air conditioning system working in all carriages of the Barcelona metro during the whole year. On the platforms, levels were considerably higher, reaching mean levels of 59 and 88 μgPM2.5 m-3 in the new (L9) and old (L3) lines, respectively. PM10 data are also reported in the present study, but comparison with other metro systems is more difficult due to the scarcity of data compared with PM2.5. Results showed clear PM daily cycles, with a drastic increase from 06:00 to 07:00 a.m., a diurnal maximum from 07:00 a.m. to 10:00 p.m., and marked decreases between 10:00 p.m. and 05:00 a.m. The elements with the highest enrichment are those associated with wheel or brake abrasion products (Ba, Fe, Cu, Mn, Cr, Sb, As, Mo, Co, Sr, among others). Laminar hematite (Fe2O3) was the dominant particle type, being mainly originated by mechanical abrasion of the rail track and wheels. Regarding passenger exposure to PM inside the metro system, the contribution of commuting by metro

  2. Coarse-graining using the relative entropy and simplex-based optimization methods in VOTCA

    NASA Astrophysics Data System (ADS)

    Rühle, Victor; Jochum, Mara; Koschke, Konstantin; Aluru, N. R.; Kremer, Kurt; Mashayak, S. Y.; Junghans, Christoph

    2014-03-01

    Coarse-grained (CG) simulations are an important tool to investigate systems on larger time and length scales. Several methods for systematic coarse-graining were developed, varying in complexity and the property of interest. Thus, the question arises which method best suits a specific class of system and desired application. The Versatile Object-oriented Toolkit for Coarse-graining Applications (VOTCA) provides a uniform platform for coarse-graining methods and allows for their direct comparison. We present recent advances of VOTCA, namely the implementation of the relative entropy method and downhill simplex optimization for coarse-graining. The methods are illustrated by coarse-graining SPC/E bulk water and a water-methanol mixture. Both CG models reproduce the pair distributions accurately. SYM is supported by AFOSR under grant 11157642 and by NSF under grant 1264282. CJ was supported in part by the NSF PHY11-25915 at KITP. K. Koschke acknowledges funding by the Nestle Research Center.

  3. In Vitro Exposures in Diesel Exhaust Atmospheres: Resuspension of PM from Filters Verses Direct Deposition of PM from Air

    PubMed Central

    Lichtveld, Kim M.; Ebersviller, Seth M.; Sexton, Kenneth G.; Vizuete, William; Jaspers, Ilona; Jeffries, Harvey E.

    2012-01-01

    One of the most widely used in vitro particulate matter (PM) exposures methods is the collection of PM on filters, followed by resuspension in a liquid medium, with subsequent addition onto a cell culture. To avoid disruption of equilibria between gases and PM, we have developed a direct in vitro sampling and exposure method (DSEM) capable of PM-only exposures. We hypothesize that the separation of phases and post-treatment of filter-collected PM significantly modifies the toxicity of the PM compared to direct deposition, resulting in a distorted view of the potential PM health effects. Controlled test environments were created in a chamber that combined diesel exhaust with an urban-like mixture. The complex mixture was analyzed using both the DSEM and concurrently-collected filter samples. The DSEM showed that PM from test atmospheres produced significant inflammatory response, while the resuspension exposures at the same exposure concentration did not. Increasing the concentration of resuspended PM sixteen times was required to yield measurable IL-8 expression. Chemical analysis of the resuspended PM indicated a total absence of carbonyl compounds compared to the test atmosphere during the direct-exposures. Therefore, collection and resuspension of PM into liquid modifies its toxicity and likely leads to underestimating toxicity. PMID:22834915

  4. Human health risk due to variations in PM10-PM2.5 and associated PAHs levels

    NASA Astrophysics Data System (ADS)

    Sosa, Beatriz S.; Porta, Andrés; Colman Lerner, Jorge Esteban; Banda Noriega, Roxana; Massolo, Laura

    2017-07-01

    WHO (2012) reports that chronic exposure to air pollutants, including particulate matter (PM), causes the death of 7 million people, constituting the most important environmental risk for health in the world. IARC classifies contaminated outdoor air as carcinogenic, Group 1 category. However, in our countries there are few studies regarding air pollution levels and possible associated effects on public health. The current study determined PM and associated polycyclic aromatic hydrocarbons (PAHs) levels in outdoor air, identified their possible emission sources and analysed health risks in the city of Tandil (Argentina). PM10 and PM2.5 samples were collected using a low volume sampler (MiniVol TAS) in three areas: city centre, industrial and residential. Concentrations were determined by gravimetric methods and the content of the US EPA 16 priority PAHs was found by high performance liquid chromatography (HPLC). Description of the main emission sources and selection of monitoring sites resulted from spatial analysis and the IVE (International Vehicle Emissions) model was used in the characterisation of the traffic flow. Median values of 35.7 μgm-3 and 9.6 μgm-3 in PM10 and PM2.5 respectively and characteristic profiles were found for each area. Local values PAHs associated to PM10 and PM2.5, in general, were lower than 10ngm-3. The estimated Unit Risk for the three areas exceeds US EPA standards (9 × 10-5). The number of deaths attributable to short term exposure to outdoor PM10 was 4 cases in children under 5 years of age, and 21 cases in total population, for a relative risk of 1.037.

  5. Development of bacteria-based bioassays for arsenic detection in natural waters.

    PubMed

    Diesel, Elizabeth; Schreiber, Madeline; van der Meer, Jan Roelof

    2009-06-01

    Arsenic contamination of natural waters is a worldwide concern, as the drinking water supplies for large populations can have high concentrations of arsenic. Traditional techniques to detect arsenic in natural water samples can be costly and time-consuming; therefore, robust and inexpensive methods to detect arsenic in water are highly desirable. Additionally, methods for detecting arsenic in the field have been greatly sought after. This article focuses on the use of bacteria-based assays as an emerging method that is both robust and inexpensive for the detection of arsenic in groundwater both in the field and in the laboratory. The arsenic detection elements in bacteria-based bioassays are biosensor-reporter strains; genetically modified strains of, e.g., Escherichia coli, Bacillus subtilis, Staphylococcus aureus, and Rhodopseudomonas palustris. In response to the presence of arsenic, such bacteria produce a reporter protein, the amount or activity of which is measured in the bioassay. Some of these bacterial biosensor-reporters have been successfully utilized for comparative in-field analyses through the use of simple solution-based assays, but future methods may concentrate on miniaturization using fiberoptics or microfluidics platforms. Additionally, there are other potential emerging bioassays for the detection of arsenic in natural waters including nematodes and clams.

  6. A bioassay for the detection of perchlorate in the ppb range.

    PubMed

    Heinnickel, Mark; Smith, Stephen C; Koo, Jonathan; O'Connor, Susan M; Coates, John D

    2011-04-01

    A bioassay for the determination of ppb (μg·L(-1)) concentrations of perchlorate has been developed and is described herein. The assay uses the enzyme perchlorate reductase (PR) from the perchlorate-reducing organism Dechloromonas agitata in purified and partially purified forms to detect perchlorate. The redox active dye phenazine methosulfate (PMS) is shown to efficiently shuttle electrons to PR from NADH. Perchlorate can be determined indirectly by monitoring NADH oxidization by PR. To lower the detection limit, we have shown that perchlorate can be concentrated on a solid-phase extraction (SPE) column that is pretreated with the cation decyltrimethylammonium bromide (DTAB). Perchlorate is eluted from these columns with a solution of 2 M NaCl and 200 mM morpholine propane sulfonic acid (MOPS, pH 12.5). By washing these columns with 15 mL of 2.5 mM DTAB and 15% acetone, contaminating ions, such as chlorate and nitrate, are removed without affecting the bioassay. Because of the effect of complex matrices on the SPE columns, the method of standard additions is used to analyze tap water and groundwater samples. The efficacy of the developed bioassay was demonstrated by analyzing samples from 2-17000 ppb in deionized lab water, tap water, and contaminated groundwater.

  7. Bioassay of procoagulant albumin in human plasma.

    PubMed

    Grosset, A; Liu, L; Parker, C J; Rodgers, G M

    1994-09-01

    Procoagulant albumin (P-Al) is present in normal human plasma and increases monocyte and endothelial cell expression of tissue factor activity. To develop a bioassay for P-Al, we partially purified plasma from healthy volunteers and several patient groups using BaCl2 and (NH4)2SO4 precipitation. The samples were assayed for tissue factor (TF) inducing activity, expressed as a percentage increase compared to a serum-free media control. Over six months, the assay was reproducible in stored samples and in serial samples from normal volunteers. The plasma P-Al activities of 35 volunteers averaged 141 +/- 8.2% (SEM). There was no diurnal variation. There was no difference in the P-Al activity after a 12 hour fast and 2 hours after a large meal in 4 healthy volunteers. There was no increase in activity (r = 0.16) with the subject's age. The average activity from 16 poorly-controlled diabetics was 131 +/- 11% (SEM). No alteration in activity was seen with samples from patients with uremia, liver dysfunction, hemophilia, thrombotic events, or adenocarcinoma. These results indicate that P-Al activity can be bioassayed in individual patient samples; however, pathologic states associated with abnormal P-Al-induced tissue factor activity presently remain unidentified.

  8. Characterization of PM-PEMS for in-use measurements conducted during validation testing for the PM-PEMS measurement allowance program

    NASA Astrophysics Data System (ADS)

    Khan, M. Yusuf; Johnson, Kent C.; Durbin, Thomas D.; Jung, Heejung; Cocker, David R.; Bishnu, Dipak; Giannelli, Robert

    2012-08-01

    This study provides an evaluation of the latest Particulate Matter-Portable Emissions Measurement Systems (PM-PEMS) under different environmental and in-use conditions. It characterizes four PM measurement systems based on different measurement principles. At least three different units were tested for each PM-PEMS to account for variability. These PM-PEMS were compared with a UC Riverside's mobile reference laboratory (MEL). PM measurements were made from a class 8 truck with a 2008 Cummins diesel engine with a diesel particulate filter (DPF). A bypass around the DPF was installed in the exhaust to achieve a brake specific PM (bsPM) emissions level of 25 mg hp-1h-1. PM was dominated by elemental carbon (EC) during non-regeneration conditions and by hydrated sulfate (H2SO4.6H2O) during regeneration. The photo-acoustic PM-PEMS performed best, with a linear regression slope of 0.90 and R2 of 0.88 during non-regenerative conditions. With the addition of a filter, the photo-acoustic PM-PEMS slightly over reported than the total PM mass (slope = 1.10, R2 = 0.87). Under these same non-regeneration conditions, a PM-PEMS equipped with a quartz crystal microbalance (QCM) technology performed the poorest, and had a slope of 0.22 and R2 of 0.13. Re-tests performed on upgraded QCM PM-PEMS showed a better slope (0.66), and a higher R2 of 0.25. In the case of DPF regeneration, all PM-PEMS performed poorly, with the best having a slope of 0.20 and R2 of 0.78. Particle size distributions (PSD) showed nucleation during regeneration, with a shift of particle size to smaller diameters (˜64 nm to ˜13 nm) with elevated number concentrations when compared to non-regeneration conditions.

  9. Why is particulate matter produced by wildfires toxic to lung macrophages?

    PubMed

    Franzi, Lisa M; Bratt, Jennifer M; Williams, Keisha M; Last, Jerold A

    2011-12-01

    The mechanistic basis of the high toxicity to lung macrophages of coarse PM from the California wildfires of 2008 was examined in cell culture experiments with mouse macrophages. Wildfire PM directly killed macrophages very rapidly in cell culture at relatively low doses. The wildfire coarse PM is about four times more toxic to macrophages on an equal weight basis than the same sized PM collected from normal ambient air (no wildfires) from the same region and season. There was a good correlation between the extent of cytotoxicity and the amount of oxidative stress observed at a given dose of wildfire PM in vitro. Our data implicate NF-κB signaling in the response of macrophages to wildfire PM, and suggest that most, if not all, of the cytotoxicity of wildfire PM to lung macrophages is the result of oxidative stress. The relative ratio of toxicity and of expression of biomarkers of oxidant stress between wildfire PM and "normal" PM collected from ambient air is consistent with our previous results in mice in vivo, also suggesting that most, if not all, of the cytotoxicity of wildfire PM to lung macrophages is the result of oxidative stress. Our findings from this and earlier studies suggest that the active components of coarse PM from the wildfire are heat-labile organic compounds. While we cannot rule out a minor role for endotoxin in coarse PM preparations from the collected wildfire PM in our observed results both in vitro and in vivo, based on experiments using the inhibitor Polymyxin B most of the oxidant stress and pro-inflammatory activity observed was not due to endotoxin. Copyright © 2011 Elsevier Inc. All rights reserved.

  10. Why is Particulate Matter Produced by Wildfires Toxic To Lung Macrophages?

    PubMed Central

    Franzi, Lisa M.; Bratt, Jennifer M.; Williams, Keisha M.; Last, Jerold A.

    2011-01-01

    The mechanistic basis of the high toxicity to lung macrophages of coarse PM from the California wildfires of 2008 was examined in cell culture experiments with mouse macrophages. Wildfire PM directly killed macrophages very rapidly in cell culture at relatively low doses. The wildfire coarse PM are about four times more toxic to macrophages on an equal weight basis than the same sized PM collected from normal ambient air (no wildfires) from the same region and season. There was a good correlation between the extent of cytotoxicity and the amount of oxidative stress observed at a given dose of wildfire PM in vitro. Our data implicate NF-kB signaling in the response of macrophages to wildfire PM, and suggest that most, if not all, of the cytotoxicity of wildfire PM to lung macrophages is the result of oxidative stress. The relative ratio of toxicity and of expression of biomarkers of oxidant stress between wildfire PM and “normal” PM collected from ambient air is consistent with our previous results in mice in vivo, also suggesting that most, if not all, of the cytotoxicity of wildfire PM to lung macrophages is the result of oxidative stress. Our findings from this and earlier studies suggest that the active components of coarse PM from the wildfire are heat-labile organic compounds. While we can not rule out a minor role for endotoxin in coarse PM preparations from the collected wildfire PM in our observed results both in vitro and in vivo, based on experiments using the inhibitor Polymyxin B most of the oxidant stress and pro-inflammatory activity observed was not due to endotoxin. PMID:21945489

  11. Innovations in the flotation of fine and coarse particles

    NASA Astrophysics Data System (ADS)

    Fornasiero, D.; Filippov, L. O.

    2017-07-01

    Research on the mechanisms of particle-bubble interaction has provided valuable information on how to improve the flotation of fine (<20 µm) and coarse particles (>100 µm) with novel flotation machines which provide higher collision and attachment efficiencies of fine particles with bubbles and lower detachment of the coarse particles. Also, new grinding methods and technologies have reduced energy consumption in mining and produced better mineral liberation and therefore flotation performance.

  12. Spatiotemporal variation of PM1 pollution in China

    NASA Astrophysics Data System (ADS)

    Chen, Gongbo; Morawska, Lidia; Zhang, Wenyi; Li, Shanshan; Cao, Wei; Ren, Hongyan; Wang, Boguang; Wang, Hao; Knibbs, Luke D.; Williams, Gail; Guo, Jianping; Guo, Yuming

    2018-04-01

    Understanding spatiotemporal variation of PM1 (mass concentrations of particles with aerodynamic diameter < 1 μm) is important due to its adverse effects on health, which is potentially more severe for its deeper penetrating capability into human bodies compared with larger particles. This study aimed to quantify the spatial and temporal distribution of PM1 across China as well as its ratio with PM2.5 (<2.5 μm) and relationships with meteorological parameters in order to deepen our knowledge of the drivers of air pollution in China. Ground-based monitoring PM1 and PM2.5 measurements, along with collocated meteorological data, were obtained from 96 stations in China for the period from November 2013 to December 2014. Generalized additive models were employed to examine the relationships between PM1 and meteorological parameters. We showed that PM1 concentrations were the lowest in summer and the highest in winter. Across China, the PM1/PM2.5 ratios ranged from 0.75-0.88, reaching higher levels in January and lower in August. For spatial distribution, higher PM1/PM2.5 ratios (>0.9) were observed in North-Eastern China, North China Plain, coastal areas of Eastern China and Sichuan Basin while lower ratios (<0.7) were present in remote areas in North-Western and Northern China (e.g., Xinjiang, Tibet and Inner Mongolia). Higher PM1/PM2.5 ratios were observed on heavily polluted days and lower ratios on clean days. The high PM1/PM2.5 ratios observed in China suggest that smaller particles, PM1 fraction, are key drivers of air pollution, and that they effectively account for the majority of PM2.5 concentrations. This emphasised the role of combustion process and secondary particle formation, the sources of PM1, and the significance of controlling them.

  13. Resolving Properties of Polymers and Nanoparticle Assembly through Coarse-Grained Computational Studies.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Grest, Gary S.

    2017-09-01

    Coupled length and time scales determine the dynamic behavior of polymers and polymer nanocomposites and underlie their unique properties. To resolve the properties over large time and length scales it is imperative to develop coarse grained models which retain the atomistic specificity. Here we probe the degree of coarse graining required to simultaneously retain significant atomistic details a nd access large length and time scales. The degree of coarse graining in turn sets the minimum length scale instrumental in defining polymer properties and dynamics. Using polyethylene as a model system, we probe how the coarse - graining scale affects themore » measured dynamics with different number methylene group s per coarse - grained beads. Using these models we simulate polyethylene melts for times over 500 ms to study the viscoelastic properties of well - entangled polymer melts and large nanoparticle assembly as the nanoparticles are driven close enough to form nanostructures.« less

  14. Levels, Composition and Sources of PM in the Mexico City Metropolitan Area During the MILAGRO Campaign

    NASA Astrophysics Data System (ADS)

    Querol, X.; Pey, J.; Minguillon, M. C.; Perez, N.; Alastuey, A.; Moreno, T.; Bernabe, R.; Blanco, S.; Cardenas, B.

    2007-05-01

    Particle air pollution in urban agglomerations comes mostly from anthropogenic sources, mainly traffic, industrial processes, energy production, domestic and residential emissions, construction, but also a minor contribution from natural sources may be expected (bioaerosols, soil dust, marine aerosol). Once emitted into the atmosphere, this complex mixture of pollutants may be transformed as a function of the ambient conditions and the interaction among the different PM components, and also between PM components and gaseous pollutants. This system is especially complex in mega-cities due to the large emission volumes of PM components and gaseous precursors, the high variability and broad distribution of emission sources, and the possible long range transport of the polluted air masses. Speciation studies help to identify major sources of PM components with the end objective of applying plans and programs for PM pollution abatement. In this framework, concentration levels and compositions of particulate matter (PM2.5, PM10 and TSP) have been measured simultaneously at two sites in the Mexico City Metropolitan Area (T0 and CENICA) and at one site 50 km away from Mexico City (T1) during the MILAGRO campaign (1st to 31st March 2006). Spatial and time (day and night) variations have been analysed. Coarse fraction levels were higher at T1 than at CENICA and T0, contrary to what was expected. This was due to the important soil re-suspension at T1, contributing significantly to the crustal load. Moreover, crustal levels were higher during daytime than during nights at all sites, while some secondary compounds (sulphate and ammonium) presented an opposite trend. Regarding trace elements, levels of Pb, Zn and Cd were higher at T0 than at CENICA and T1, probably due to traffic contribution. Arsenic levels did not show a clear pattern, being alternatively higher at CENICA and T0. Two intense episodes of Hg particulate have been recorded, more noticeable at T1 than at the urban

  15. SCIENCE VERSION OF PM CHEMISTRY MODEL

    EPA Science Inventory

    PM chemistry models containing detailed treatments of key chemical processes controlling ambient concentrations of inorganic and organic compounds in PM2.5 are needed to develop strategies for reducing PM2.5 concentrations. This task, that builds on previous research conducted i...

  16. Tribological and microstructural comparison of HIPped PM212 and PM212/Au self-lubricating composites

    NASA Technical Reports Server (NTRS)

    Bogdanski, Michael S.; Sliney, Harold E.; Dellacorte, Christopher

    1992-01-01

    The feasibility of replacing the silver with the volumetric equivalent of gold in the chromium carbide-based self-lubricating composite PM212 (70 wt. percent NiCo-Cr3C2, 15 percent BaF2/CaF2 eutectic) was studied. The new composite, PM212/Au has the following composition: 62 wt. percent NiCo-Cr3C2, 25 percent Au, 13 percent BaF2/CaF2 eutectic. The silver was replaced with gold to minimize the potential reactivity of the composite with possible environmental contaminants such as sulfur. The composites were fabricated by hot isostatic pressing (HIPping) and machined into pin specimens. The pins were slid against nickel-based superalloy disks. Sliding velocities ranged from 0.27 to 10.0 m/s and temperatures from 25 to 900 C. Friction coefficients ranged from 0.25 to 0.40 and wear factors for the pin and disk were typically low 10(exp -5) cu mm/N-m. HIPped PM212 measured fully dense, whereas PM212/Au had 15 percent residual porosity. Examination of the microstructures with optical and scanning electron microscopy revealed the presence of pores in PM212/Au that were not present in PM212. Though the exact reason for the residual porosity in PM212/Au was not determined, it may be due to particle morphology differences between the gold and silver and their effect on powder metallurgy processing.

  17. Bioassays to quantify impacts of CECs in Wastewater, Surface Water, and Drinking Water : Pathway-Based In Vitro Screening

    EPA Science Inventory

    I will be giving 2 invited presentations during a 2 day meeting at Marquette University. the presentations will focus on our bioassay work on wastewater, surface water, and drinking water and bioassay work on CAFOs.

  18. Investigation of air pollution of Shanghai subway stations in ventilation seasons in terms of PM2.5 and PM10.

    PubMed

    Guo, Erbao; Shen, Henggen; He, Lei; Zhang, Jiawen

    2017-07-01

    In November 2015, the PM 2.5 and PM 10 particulate matter (PM) levels in platforms, station halls, and rail areas of the Shangcheng and Jiashan Road Station were monitored to investigate air pollution in the Shanghai subway system. The results revealed that in subway stations, PM 2.5 and PM 10 concentrations were significantly higher than those in outdoor environments. In addition, particle concentrations in the platforms exceeded maximum levels that domestic safety standards allowed. Particularly on clear days, PM 2.5 and PM 10 concentrations in platforms were significantly higher than maximum standards levels. Owing to the piston effect, consistent time-varying trends were exhibited by PM 2.5 concentrations in platforms, station halls, and rail areas. Platform particle concentrations were higher than the amount in station halls, and they were higher on clear days than on rainy days. The time-varying trends of PM 10 and PM 2.5 concentrations in platforms and station halls were similar to each other. Activities within the station led to most of the inhalable particles within the station area. The mass concentration ratios of PM 2.5 and PM 10 in platforms were within 0.65-0.93, and fine particles were the dominant components.

  19. ANALYZE EXISTING DATA ON PM COMPOSITION TO IDENTIFY KEY FACTORS WHICH INFLUENCE HUMAN EXPOSURES TO PM CONSTITUENTS

    EPA Science Inventory

    An association has been demonstrated between ambient particulate matter (PM 2.5 and PM 10) concentrations and human morbidity/mortality. However, little is known regarding the most important sources of PM exposure, interpersonal and intrapersonal variability in exposure, and the...

  20. The usefulness of a sediment bioassay with the gastropod Nassarius reticulatus in tributyltin monitoring programs.

    PubMed

    Laranjeiro, Filipe; Pérez, Sara; Navarro, Patricia; Carrero, José Antonio; Beiras, Ricardo

    2015-11-01

    Despite the use of tributyltin (TBT) had been banned worldwide in 2008 there is still evidence of its deleterious presence in environment. We evaluate the usefulness of a 28days sediment bioassay with Nassarius reticulatus females to monitor TBT pollution, using imposex as endpoint. In addition, butyltins were determined in sediments and tissues, and, whenever posible, imposex was assessed in native N. reticulatus at the same sites where sediments were sampled. In the bioassay, a significant increase in imposex parameters was obtained with three sediments (Vi2, Vi3, and Vi4). No correlation was found between this and TBT concentrations in sediment although good correlations were obtained for TBT in tissues, putting in evidence TBT bioavailability in sediment. A significant decrease in imposex from 2008 to 2013 in native snails was only observed at sites that did not cause any effect in the bioassay. In contrast, imposex levels in 2013 were kept as high as 2008 in one of the sites where a significant imposex increase in the bioassay was observed. The bioassay proves thus to be a practical and ecological relevant tool, as: (i) it can be conducted in sites with no native populations of snails, (ii) it provides early identification of polluted sites, anticipating future imposex levels or early identification of recovering, and (iii) it yields information on the bioavailable fraction of the TBT in the sediment. Therefore, this tool can be of extreme usefulness under the scope of recent European legislative frameworks. Copyright © 2015 Elsevier Ltd. All rights reserved.

  1. Evaluating the efficacy of biological and conventional insecticides with the new 'MCD bottle' bioassay.

    PubMed

    Sternberg, Eleanore D; Waite, Jessica L; Thomas, Matthew B

    2014-12-16

    Control of mosquitoes requires the ability to evaluate new insecticides and to monitor resistance to existing insecticides. Monitoring tools should be flexible and low cost so that they can be deployed in remote, resource poor areas. Ideally, a bioassay should be able to simulate transient contact between mosquitoes and insecticides, and it should allow for excito-repellency and avoidance behaviour in mosquitoes. Presented here is a new bioassay, which has been designed to meet these criteria. This bioassay was developed as part of the Mosquito Contamination Device (MCD) project and, therefore, is referred to as the MCD bottle bioassay. Presented here are two experiments that serve as a proof-of-concept for the MCD bottle bioassay. The experiments used four insecticide products, ranging from fast-acting, permethrin-treated, long-lasting insecticide nets (LLINs) that are already widely used for malaria vector control, to the slower acting entomopathogenic fungus, Beauveria bassiana, that is currently being evaluated as a prospective biological insecticide. The first experiment used the MCD bottle to test the effect of four different insecticides on Anopheles stephensi with a range of exposure times (1 minute, 3 minutes, 1 hour). The second experiment is a direct comparison of the MCD bottle and World Health Organization (WHO) cone bioassay that tests a subset of the insecticides (a piece of LLIN and a piece of netting coated with B. bassiana spores) and a further reduced exposure time (5 seconds) against both An. stephensi and Anopheles gambiae. Immediate knockdown and mortality after 24 hours were assessed using logistic regression and daily survival was assessed using Cox proportional hazards models. Across both experiments, fungus performed much more consistently than the chemical insecticides but measuring the effect of fungus required monitoring of mosquito mortality over several days to a week. Qualitatively, the MCD bottle and WHO cone performed comparably

  2. Coarse Grid CFD for underresolved simulation

    NASA Astrophysics Data System (ADS)

    Class, Andreas G.; Viellieber, Mathias O.; Himmel, Steffen R.

    2010-11-01

    CFD simulation of the complete reactor core of a nuclear power plant requires exceedingly huge computational resources so that this crude power approach has not been pursued yet. The traditional approach is 1D subchannel analysis employing calibrated transport models. Coarse grid CFD is an attractive alternative technique based on strongly under-resolved CFD and the inviscid Euler equations. Obviously, using inviscid equations and coarse grids does not resolve all the physics requiring additional volumetric source terms modelling viscosity and other sub-grid effects. The source terms are implemented via correlations derived from fully resolved representative simulations which can be tabulated or computed on the fly. The technique is demonstrated for a Carnot diffusor and a wire-wrap fuel assembly [1]. [4pt] [1] Himmel, S.R. phd thesis, Stuttgart University, Germany 2009, http://bibliothek.fzk.de/zb/berichte/FZKA7468.pdf

  3. Variability of levels and composition of PM10 and PM2.5 in the Barcelona metro system

    NASA Astrophysics Data System (ADS)

    Querol, X.; Moreno, T.; Karanasiou, A.; Reche, C.; Alastuey, A.; Viana, M.; Font, O.; Gil, J.; de Miguel, E.; Capdevila, M.

    2012-06-01

    From an environmental perspective, the underground metro system is one of the cleanest forms of public transportation in urban agglomerations. Current studies report contradicting results regarding air quality in the metro systems: whereas some reveal poor air quality, others report PM levels which are lower or of the same order of magnitude than those measured in traffic sites above ground level. The present work assesses summer and winter indoor air quality and passenger exposure in the Barcelona metro, focusing on PM levels and their metal contents. In addition, the impact on indoor air quality of platform screen door systems (automated systems consisting of closed rail track and platforms) is evaluated, to determine whether these systems reduce passenger exposure to PM when compared with conventional systems (open tracks and platforms). In the Barcelona metro PM levels inside the trains in summer are amongst the lowest reported for worldwide metro systems (11-32 μg m-3 PM2.5). This is most likely due to the air conditioning system working in all carriages of the Barcelona metro during the whole year. Levels were considerably higher on the platforms, reaching mean levels of 46 and 125 μg m3 in the new (L9) and old (L3) lines, respectively. PM10 data are also reported in the present study, but comparison with other metro systems is difficult due to the scarcity of data compared with PM2.5. Results showed distinct PM daily cycles, with a drastic increase from 06:00 to 07:00 a.m., a diurnal maximum from 07:00 to 10:00 p.m., and marked decrease between 10:00 p.m. and 05:00 a.m. The elements with the highest enrichment were those associated with wheel or brake abrasion products (Ba, Fe, Cu, Mn, Cr, Sb, As, Mo, Co, Sr, among others). Laminar hematite (Fe2O3) was the dominant particle type, being mainly originated by mechanical abrasion of the rail track and wheels. Regarding passenger exposure to PM, the contribution of commuting by metro was estimated to account

  4. Efficient coarse simulation of a growing avascular tumor

    PubMed Central

    Kavousanakis, Michail E.; Liu, Ping; Boudouvis, Andreas G.; Lowengrub, John; Kevrekidis, Ioannis G.

    2013-01-01

    The subject of this work is the development and implementation of algorithms which accelerate the simulation of early stage tumor growth models. Among the different computational approaches used for the simulation of tumor progression, discrete stochastic models (e.g., cellular automata) have been widely used to describe processes occurring at the cell and subcell scales (e.g., cell-cell interactions and signaling processes). To describe macroscopic characteristics (e.g., morphology) of growing tumors, large numbers of interacting cells must be simulated. However, the high computational demands of stochastic models make the simulation of large-scale systems impractical. Alternatively, continuum models, which can describe behavior at the tumor scale, often rely on phenomenological assumptions in place of rigorous upscaling of microscopic models. This limits their predictive power. In this work, we circumvent the derivation of closed macroscopic equations for the growing cancer cell populations; instead, we construct, based on the so-called “equation-free” framework, a computational superstructure, which wraps around the individual-based cell-level simulator and accelerates the computations required for the study of the long-time behavior of systems involving many interacting cells. The microscopic model, e.g., a cellular automaton, which simulates the evolution of cancer cell populations, is executed for relatively short time intervals, at the end of which coarse-scale information is obtained. These coarse variables evolve on slower time scales than each individual cell in the population, enabling the application of forward projection schemes, which extrapolate their values at later times. This technique is referred to as coarse projective integration. Increasing the ratio of projection times to microscopic simulator execution times enhances the computational savings. Crucial accuracy issues arising for growing tumors with radial symmetry are addressed by

  5. Basic statistics of PM2.5 and PM10 in the atmosphere of Mexico City.

    PubMed

    Vega, E; Reyes, E; Sánchez, G; Ortiz, E; Ruiz, M; Chow, J; Watson, J; Edgerton, S

    2002-03-27

    The high levels of fine particulate matter in Mexico City are of concern since they may induce severe public health effects as well as the attenuation of visible light. Sequential filter samplers were used at six different sites from 23 February to 22 March 1997. The sampling campaign was carried out as part of the project 'Investigación sobre Materia Particulada y Deterioro Atmosferico-Aerosol and Visibility Evaluation Research'. This research was a cooperative project sponsored by PEMEX and by the US Department of Energy. Sampling sites represent the different land uses along the city, the northwest station, Tlalnepantla, is located in a mixed medium income residential and industrial area. The northeast station, Xalostoc, is located in a highly industrialized area, Netzahualcoyotl is located in a mixed land use area, mainly commercial and residential. Station La Merced is located in the commercial and administrative district downtown. The southwest station is located in the Pedregal de San Angel, in a high-income neighborhood, and the southeast station located in Cerro de la Estrella is a mixed medium income residential and commercial area. Samples were collected four times a day in Cerro de la Estrella (CES), La Merced (MER) and Xalostoc (XAL) with sampling periods of 6 h. In Pedregal (PED), Tlalnepantla (TLA) and Netzahualcoyot1 (NEZ) sampling periods were every 24 h. In this paper the basic statistics of PM2.5 and PM10 mass concentrations are presented. The average results showed that 49, 61, 46, 57, 51 and 44% of the PM10 consisted of PM2.5 for CES, MER, XAL, PED, TLA and NEZ, respectively. The 24-h average highest concentrations of PM25 and PM10 were registered at NEZ (184 and 267 microg/m3) and the lowest at PED (22 and 39 microg/m3). The highest PM10 correlations were between XAL-CES (0.79), PED-TLA (0.80). In contrast, the highest PM2.5 correlations were between CES-PED (0.74), MER-CES (0.73) and TLA-PED (0.72), showing a lower correlation than the PM10

  6. Functional diagnostics for thyrotropin hormone receptor autoantibodies: bioassays prevail over binding assays.

    PubMed

    Lytton, Simon David; Schluter, Anke; Banga, Paul J

    2018-06-01

    Autoantibodies to the thyrotropin hormone receptor (TSH-R) are directly responsible for the hyperthyroidism in Graves' disease and mediate orbital manifestations in Graves' orbitopathy (otherwise known as thyroid eye disease). These autoantibodies are heterogeneous in their function and collectively referred to as TRAbs. Measurement of TRAbs is clinically important for diagnosis of a variety of conditions and different commercial assays with high sensitivity and specificity are available for diagnostic purposes. This review provides overwhelming evidence that the TRAbs detected in binding assays by mainly the automated electrochemical luminescence immunoassays (ECLIA) do not distinguish TRAbs that stimulate the TSH-R (called TSIs or TSAbs) and TRAbs that just inhibit the binding of TSH without stimulating the TSH-R (called TBAbs). However, TSAbs and TBAbs have divergent pathogenic roles, and depending which fraction predominates cause different clinical symptoms and engender different therapeutic regimen. Therefore, diagnostic distinction of TSAbs and TBAbs is of paramount clinical importance. To date, only bioassays such as the Mc4 TSH-R bioassay (Thyretain TM , Quidel) and the Bridge assay (Immulite 2000, Siemens) can measure TSAbs, with only the former being able to distinguish between TSAbs and TBAbs. On this note, it is strongly recommended to only use the term TSI or TSAb when reporting the results of bioassays, whereas the results of automated TRAb binding assays should be reported as TRAbs (of undetermined functional significance). This review aims to present a technical and analytical account of leading commercial diagnostic methods of anti-TSH-R antibodies, a metaanalysis of their clinical performance and a perspective for the use of cell based TSH-R bioassays in the clinical diagnostics of Graves' disease.

  7. Seasonally and regionally determined indication potential of bioassays in contaminated river sediments.

    PubMed

    Hilscherová, Klára; Dusek, Ladislav; Sídlová, Tereza; Jálová, Veronika; Cupr, Pavel; Giesy, John P; Nehyba, Slavomír; Jarkovský, Jirí; Klánová, Jana; Holoubek, Ivan

    2010-03-01

    River sediments are a dynamic system, especially in areas where floods occur frequently. In the present study, an integrative approach is used to investigate the seasonal and spatial dynamics of contamination of sediments from a regularly flooded industrial area in the Czech Republic, which presents a suitable model ecosystem for pollutant distribution research at a regional level. Surface sediments were sampled repeatedly to represent two different hydrological situations: spring (after the peak of high flow) and autumn (after longer period of low flow). Samples were characterized for abiotic parameters and concentrations of priority organic pollutants. Toxicity was assessed by Microtox test; genotoxicity by SOS-chromotest and green fluorescent protein (GFP)-yeast test; and the presence of compounds with specific mode of action by in vitro bioassays for dioxin-like activity, anti-/androgenicity, and anti-/estrogenicity. Distribution of organic contaminants varied among regions and seasonally. Although the results of Microtox and genotoxicity tests were relatively inconclusive, all other specific bioassays led to statistically significant regional and seasonal differences in profiles and allowed clear separation of upstream and downstream regions. The outcomes of these bioassays indicated an association with concentrations of polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) as master variables. There were significant interrelations among dioxin-like activity, antiandrogenicity and content of organic carbon, clay, and concentration of PAHs and PCBs, which documents the significance of abiotic factors in accumulation of pollutants. The study demonstrates the strength of the specific bioassays in indicating the changes in contamination and emphasizes the crucial role of a well-designed sampling plan, in which both spatial and temporal dynamics should be taken into account, for the correct interpretations of information in risk assessments.

  8. Comparison of liquid chromatographic and bioassay procedures for determining depletion of intramuscularly injected tylosin.

    PubMed

    Moats, W A; Harris, E W; Steele, N C

    1985-01-01

    Crossbred pigs weighing 80-110 kg were injected intramuscularly in the ham with 8.8 mg/kg tylosin. Animals were slaughtered in groups of 3 at intervals of 4 h, and 1, 2, 4, and 8 days after injection, and samples of blood, injected muscle, uninjected muscle, liver, and kidney were analyzed by liquid chromatography (LC) and by bioassay using Sarcina lutea as the test organism. The LC method was far more sensitive with a detection limit of less than 0.1 ppm, while the detection limit by bioassay was about 0.5 ppm in tissue. Results by bioassay and LC sometimes differed considerably for tissue samples. Residues in all tissues were below the tolerance limit of 0.2 ppm at 24 h, except in the injected muscle in one animal. Residues were not detected in any tissue of any animal at 48 h after treatment.

  9. Fluorescent bioassays for toxic metals in milk and yoghurt

    PubMed Central

    2012-01-01

    Background From a human health viewpoint, contaminated milk and its products could be a source of long-term exposure to toxic metals. Simple, inexpensive, and on-site assays would enable constant monitoring of their contents. Bioassays that can measure toxic metals in milk or yoghurt might reduce the risk. For this purpose, the green fluorescent protein (GFP)-tagged trans factors, ArsR-GFP and CadC-GFP, together with their cis elements were used to develop such bioassays. Results ArsR-GFP or CadC-GFP, which binds either toxic metal or DNA fragment including cis element, was directly mixed with cow’s milk or yoghurt within a neutral pH range. The fluorescence of GFP, which is reflected by the association/dissociation ratio between cis element and trans factor, significantly changed with increasing externally added As (III) or Cd (II) whereas smaller responses to externally added Pb (II) and Zn (II) were found. Preparation and dilution of whey fraction at low pH were essential to intrinsic zinc quantification using CadC-GFP. Using the extraction procedure and bioassay, intrinsic Zn (II) concentrations ranging from 1.4 to 4.8 mg/l for milk brands and from 1.2 to 2.9 mg/kg for yoghurt brands were determined, which correlated to those determined using inductively coupled plasma atomic emission spectroscopy. Conclusions GFP-tagged bacterial trans factors and cis elements can work in the neutralized whole composition and diluted whey fraction of milk and yoghurt. The feature of regulatory elements is advantageous for establishment of simple and rapid assays of toxic metals in dairy products. PMID:23098077

  10. Spatial variation of PM2.5, PM10, PM2.5 absorbance and PMcoarse concentrations between and within 20 European study areas and the relationship with NO2 - Results of the ESCAPE project

    NASA Astrophysics Data System (ADS)

    Eeftens, Marloes; Tsai, Ming-Yi; Ampe, Christophe; Anwander, Bernhard; Beelen, Rob; Bellander, Tom; Cesaroni, Giulia; Cirach, Marta; Cyrys, Josef; de Hoogh, Kees; De Nazelle, Audrey; de Vocht, Frank; Declercq, Christophe; Dėdelė, Audrius; Eriksen, Kirsten; Galassi, Claudia; Gražulevičienė, Regina; Grivas, Georgios; Heinrich, Joachim; Hoffmann, Barbara; Iakovides, Minas; Ineichen, Alex; Katsouyanni, Klea; Korek, Michal; Krämer, Ursula; Kuhlbusch, Thomas; Lanki, Timo; Madsen, Christian; Meliefste, Kees; Mölter, Anna; Mosler, Gioia; Nieuwenhuijsen, Mark; Oldenwening, Marieke; Pennanen, Arto; Probst-Hensch, Nicole; Quass, Ulrich; Raaschou-Nielsen, Ole; Ranzi, Andrea; Stephanou, Euripides; Sugiri, Dorothee; Udvardy, Orsolya; Vaskövi, Éva; Weinmayr, Gudrun; Brunekreef, Bert; Hoek, Gerard

    2012-12-01

    The ESCAPE study (European Study of Cohorts for Air Pollution Effects) investigates relationships between long-term exposure to outdoor air pollution and health using cohort studies across Europe. This paper analyses the spatial variation of PM2.5, PM2.5 absorbance, PM10 and PMcoarse concentrations between and within 20 study areas across Europe.We measured NO2, NOx, PM2.5, PM2.5 absorbance and PM10 between October 2008 and April 2011 using standardized methods. PMcoarse was determined as the difference between PM10 and PM2.5. In each of the twenty study areas, we selected twenty PM monitoring sites to represent the variability in important air quality predictors, including population density, traffic intensity and altitude. Each site was monitored over three 14-day periods spread over a year, using Harvard impactors. Results for each site were averaged after correcting for temporal variation using data obtained from a reference site, which was operated year-round.Substantial concentration differences were observed between and within study areas. Concentrations for all components were higher in Southern Europe than in Western and Northern Europe, but the pattern differed per component with the highest average PM2.5 concentrations found in Turin and the highest PMcoarse in Heraklion. Street/urban background concentration ratios for PMcoarse (mean ratio 1.42) were as large as for PM2.5 absorbance (mean ratio 1.38) and higher than those for PM2.5 (1.14) and PM10 (1.23), documenting the importance of non-tailpipe emissions. Correlations between components varied between areas, but were generally high between NO2 and PM2.5 absorbance (average R2 = 0.80). Correlations between PM2.5 and PMcoarse were lower (average R2 = 0.39). Despite high correlations, concentration ratios between components varied, e.g. the NO2/PM2.5 ratio varied between 0.67 and 3.06.In conclusion, substantial variability was found in spatial patterns of PM2.5, PM2.5 absorbance, PM10 and PMcoarse. The

  11. PM POPULATION EXPOSURE AND DOSE MODELS

    EPA Science Inventory

    The overall objective of this study is the development of a refined probabilistic exposure and dose model for particulate matter (PM) suitable for predicting PM10 and PM2.5 population exposures. This modeling research will be conducted both in-house by EPA scientists and through...

  12. Inverse Coarse-Graining: A New Tool for Molecular Design

    DTIC Science & Technology

    2010-12-16

    simulations. When compared with the more general multiscale coarse-graining (MS-CG) method, the EF-CG method retains the transferable part of the CG...Y.; Yan, T.; Voth, G. A., A Multiscale coarse-graining study of liquid/vacuum interface of room-temperature ionic liquids with alkyl substituents of...Energetic Room Temperature Ionic Liquid 1-Hydroxyethyl-4Amino-1, 2, 4-Triazolium Nitrate (HEATN). J. Phys. Chem. B 2008, 112, 3121-3131. 6. Liu, P

  13. Growth, extracellular alkaline phosphatase activity, and kinetic characteristic responses of the bloom-forming toxic cyanobacterium, Microcystis aeruginosa, to atmospheric particulate matter (PM2.5, PM2.5-10, and PM>10).

    PubMed

    Xu, Ziran; Wang, Shoubing; Wang, Yuanan; Zhang, Jie

    2018-03-01

    Atmospheric particulate matter (APM), commonly seen and widely excited in environment, appears great enough to influence the biochemical processes in aquatic microorganisms and phytoplankton. Understanding the response of cyanobacteria to various factors is fundamental for eutrophication control. To clarify the response of cyanobacteria to APM, the effects of PM 2.5 , PM 2.5-10 , and PM >10 on Microcystis aeruginosa were researched. Variabilities in cell density, chlorophyll a, soluble protein, malondialdehyde, extracellular activity, and kinetic parameters of alkaline phosphatase were evaluated by lab-cultured experiments. Results showed that the PM 2.5 had a slight stimulation impact on the growth and enhanced both of the 48- and 72-h extracellular alkaline phosphatase activity (APA), the affinity of alkaline phosphatase for substrate, and the 72-h maximum enzymatic reaction velocity (V max ). Moreover, the stimulations in extracellular APA and V max enhanced with the increasing exposure concentrations. We also found there were no obvious distinctions on the effects of growth and alkaline phosphatase in M. aeruginosa between PM 2.5-10 and PM >10 exposure groups. Obviously, inhibitory effects on growth existed in 4.0 and 8.0 mg/L PM 2.5-10 and 8.0 mg/L PM >10 at 120 h. Furthermore, PM 2.5-10 and PM >10 exerted inhibitory effects on the extracellular APA during the 72-h exposure. Simultaneously, the V max was notably inhibited and the affinity of alkaline phosphatase for substrate was more inseparable compared with control in PM 2.5-10 and PM >10 treatments. Nevertheless, the inhibitors in extracellular APA and kinetic parameters were unrelated to PM 2.5-10 and PM >10 exposure concentrations. Two-way ANOVA results revealed that there were significant interactions between exposure concentration and diameter of APM on the 120-h cell density, soluble protein content, APA, and 72 h APA of M. aeruginosa. These results in our study would be meaningful to further

  14. USING BIOASSAYS TO EVALUATE THE PERFORMANCE OF RISK MANAGEMENT TECHNIQUES

    EPA Science Inventory

    Often, the performance of risk management techniques is evaluated by measuring the concentrations of the chemials of concern before and after risk management effoprts. However, using bioassays and chemical data provides a more robust understanding of the effectiveness of risk man...

  15. A CONTROLLED BIOASSAY SYSTEM FOR MEASURING TOXICITY OF HEAVY METALS

    EPA Science Inventory

    Biological availability of metal micronutrients and metal toxicity are believed to be dependent on metal oxidation state, complexation, and solubility as well as the physicochemical characteristics of the aqueous phase. Basic design criteria for fish bioassays which are capable o...

  16. Bivalve embryo bioassay to assess the potential toxicity of dredged material before dumping

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Quiniou, F.

    1995-12-31

    Dredged harbor sediments frequently contain a wide spectrum of contaminants in addition to a significant percentage of organic matter. Also, dredging and dumping activities into sea water, of these highly contaminated soil may induce a harmful effect on the environment. In France, in accordance with Oslo convention guidelines, a working group on dredging activities and environment (GEODE) created since 1991 decided to set up a pilot research program to assess the intrinsic toxicity of four harbor sludges. Intrinsic toxicity of harbor muds were tested by solid phase (whole sediment) and aqueous extract bioassays (sea water elutriates) using the sublethal toxicitymore » test bivalve embryo bioassay (Crassostrea gigas). Elutriates enable them to detect the toxicity of contaminants which may be released in the soluble form into the water column during dredging operations. While, whole sediment integrate the synergistic effects of all the contaminants (hydrophilic and hydrophobic) including pore water. Bioassays results, correlated to chemical analysis, are compared to contaminant levels determined by French working group GEODE and Canadian sediment quality criteria.« less

  17. Nonlinear evolution of coarse-grained quantum systems with generalized purity constraints

    NASA Astrophysics Data System (ADS)

    Burić, Nikola

    2010-12-01

    Constrained quantum dynamics is used to propose a nonlinear dynamical equation for pure states of a generalized coarse-grained system. The relevant constraint is given either by the generalized purity or by the generalized invariant fluctuation, and the coarse-grained pure states correspond to the generalized coherent, i.e. generalized nonentangled states. Open system model of the coarse-graining is discussed. It is shown that in this model and in the weak coupling limit the constrained dynamical equations coincide with an equation for pointer states, based on Hilbert-Schmidt distance, that was previously suggested in the context of the decoherence theory.

  18. Elemental characterization and source apportionment of PM10 and PM2.5 in the western coastal area of central Taiwan.

    PubMed

    Hsu, Chin-Yu; Chiang, Hung-Che; Lin, Sheng-Lun; Chen, Mu-Jean; Lin, Tzu-Yu; Chen, Yu-Cheng

    2016-01-15

    This study investigated seasonal variations in PM10 and PM2.5 mass and associated trace metal concentrations in a residential area in proximity to the crude oil refinery plants and industrial parks of central Taiwan. Particle measurements were conducted during winter, spring and summer in 2013 and 2014. Twenty-six trace metals in PM10 and PM2.5 were analyzed using ICP-MS. Multiple approaches of the backward trajectory model, enrichment factor (EF), Lanthanum enrichment and positive matrix fraction (PMF) were used to identify potential sources of particulate metals. Mean concentrations of PM10 in winter, spring and summer were 76.4 ± 22.6, 33.2 ± 9.9 and 37.4 ± 17.0 μg m(-3), respectively, while mean levels of PM2.5 in winter, spring and summer were 47.8 ± 20.0, 23.9 ± 11.2 and 16.3 ± 8.2 μg m(-3), respectively. The concentrations of carcinogenic metals (Ni, As and adjusted Cr(VI)) in PM10 and PM2.5 exceeded the guideline limits published by WHO. The result of EF analysis confirmed that Mo, Sb, Cd, Zn, Mg, Cr, As, Pb, Cu, Ni and V were attributable to anthropogenic emission. PMF analysis demonstrated that trace metals in PM10 and PM2.5 were from the similar sources, such as coal combustion, oil combustion and traffic-related emission, except for soil dust and crustal element emissions only observed in PM10 and secondary aluminum smelter only observed in PM2.5. Considering health-related particulate metals, the traffic-related emission and coal combustion for PM10 and PM2.5, respectively, are important to control for reducing potential carcinogenic risk. The results could aid efforts to clarify the impact of source-specific origins on human health. Copyright © 2015 Elsevier B.V. All rights reserved.

  19. Adiabatic coarse-graining and simulations of stochastic biochemical networks

    PubMed Central

    Sinitsyn, N. A.; Hengartner, Nicolas; Nemenman, Ilya

    2009-01-01

    We propose a universal approach for analysis and fast simulations of stiff stochastic biochemical networks, which rests on elimination of fast chemical species without a loss of information about mesoscopic, non-Poissonian fluctuations of the slow ones. Our approach is similar to the Born–Oppenheimer approximation in quantum mechanics and follows from the stochastic path integral representation of the cumulant generating function of reaction events. In applications with a small number of chemical reactions, it produces analytical expressions for cumulants of chemical fluxes between the slow variables. This allows for a low-dimensional, interpretable representation and can be used for high-accuracy, low-complexity coarse-grained numerical simulations. As an example, we derive the coarse-grained description for a chain of biochemical reactions and show that the coarse-grained and the microscopic simulations agree, but the former is 3 orders of magnitude faster. PMID:19525397

  20. Building bio-assays with magnetic particles on a digital microfluidic platform.

    PubMed

    Kokalj, Tadej; Pérez-Ruiz, Elena; Lammertyn, Jeroen

    2015-09-25

    Digital microfluidics (DMF) has emerged as a promising liquid handling technology for a variety of applications, demonstrating great potential both in terms of miniaturization and automation. DMF is based on the manipulation of discrete, independently controllable liquid droplets, which makes it highly reconfigurable and reprogrammable. One of its most exclusive advantages, compared to microchannel-based microfluidics, is its ability to precisely handle solid nano- and microsized objects, such as magnetic particles. Magnetic particles have become very popular in the last decade, since their high surface-to-volume ratio and the possibility to magnetically separate them from the matrix make them perfect suitable as a solid support for bio-assay development. The potential of magnetic particles in DMF-based bio-assays has been demonstrated for various applications. In this review we discuss the latest developments of magnetic particle-based DMF bio-assays with the aim to present, identify and analyze the trends in the field. We also discuss the state-of-the art of device integration, current status of commercialization and issues that still need to be addressed. With this paper we intend to stimulate researchers to exploit and unveil the potential of these exciting tools, which will shape the future of modern biochemistry, microbiology and biomedical diagnostics. Copyright © 2015 Elsevier B.V. All rights reserved.

  1. 9 CFR 147.16 - Procedure for the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment).

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 9 Animals and Animal Products 1 2011-01-01 2011-01-01 false Procedure for the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment). 147.16 Section 147.16 Animals and Animal Products... the evaluation of mycoplasma reactors by in vivo bio-assay (enrichment). This procedure has been shown...

  2. Investigation of animal and algal bioassays for reliable saxitoxin ecotoxicity and cytotoxicity risk evaluation.

    PubMed

    Perreault, François; Matias, Marcelo Seleme; Melegari, Silvia Pedroso; Pinto, Catia Regina Silva de Carvalho; Creppy, Edmond Ekué; Popovic, Radovan; Matias, William Gerson

    2011-05-01

    Contamination of water bodies by saxitoxin can result in various toxic effects in aquatic organisms. Saxitoxin contamination has also been shown to be a threat to human health in several reported cases, even resulting in death. In this study, we evaluated the sensitivity of animal (Neuro-2A) and algal (Chlamydomonas reinhardtii) bioassays to saxitoxin effect. Neuro-2A cells were found to be sensitive to saxitoxin, as shown by a 24 h EC50 value of 1.5 nM, which was obtained using a cell viability assay. Conversely, no saxitoxin effect was found in any of the algal biomarkers evaluated, for the concentration range tested (2-128 nM). These results indicate that saxitoxin may induce toxic effects in animal and human populations at concentrations where phytoplankton communities are not affected. Therefore, when evaluating STX risk of toxicity, algal bioassays do not appear to be reliable indicators and should always be conducted in combination with animal bioassays. Copyright © 2011 Elsevier Inc. All rights reserved.

  3. Real-Time Continuous Identification of Greenhouse Plant Pathogens Based on Recyclable Microfluidic Bioassay System.

    PubMed

    Qu, Xiangmeng; Li, Min; Zhang, Hongbo; Lin, Chenglie; Wang, Fei; Xiao, Mingshu; Zhou, Yi; Shi, Jiye; Aldalbahi, Ali; Pei, Hao; Chen, Hong; Li, Li

    2017-09-20

    The development of a real-time continuous analytical platform for the pathogen detection is of great scientific importance for achieving better disease control and prevention. In this work, we report a rapid and recyclable microfluidic bioassay system constructed from oligonucleotide arrays for selective and sensitive continuous identification of DNA targets of fungal pathogens. We employ the thermal denaturation method to effectively regenerate the oligonucleotide arrays for multiple sample detection, which could considerably reduce the screening effort and costs. The combination of thermal denaturation and laser-induced fluorescence detection technique enables real-time continuous identification of multiple samples (<10 min per sample). As a proof of concept, we have demonstrated that two DNA targets of fungal pathogens (Botrytis cinerea and Didymella bryoniae) can be sequentially analyzed using our rapid microfluidic bioassay system, which provides a new paradigm in the design of microfluidic bioassay system and will be valuable for chemical and biomedical analysis.

  4. Identification of mammalian cell genotoxins in respirable diesel exhaust particles by bioassay-directed chemical analysis.

    PubMed

    Oh, Seung-Min; Chung, Kyu-Hyuck

    2006-03-01

    A bioassay-directed chemical analysis which consists of mammalian cell bioassays (comet assay, CBMN assay and EROD-microbioassay) in conjunction with analytical measurements was performed to identify the most biologically active compounds of the diesel exhaust particulate matters (DEPs) on mutagenic activity. These bioassay systems were suitable to estimate the mammalian genotoxic potentials of pollutants present in low concentrations in limited environmental samples, as is the case with DEPEs. The results from mutagenic assay showed that the aromatic and slightly polar fraction of DEPs induced chromosomal damage and DNA breakage in a non-cytotoxic dose. It was also revealed that indirect-acting mutagens may mainly contribute to the mutagenic effect of aromatic fraction via the enzyme metabolism system. In the aromatic fraction, several indirect-acting mutagenic PAHs such as dibenzo(a,h)anthracene, chrysene, and 1,2-benzanthracene were detected by GC-MS and the complex mixture effect of this fraction was quantified in terms of its biological-TCDD equivalent concentration (bio-TEQ) which was 32.82 bio-TEQ ng/g-DEPs by EROD-microbioassay. Conclusively, we confirmed that indirect-acting mutagens contained in aromatic fraction may be important causatives of the genotoxicity of extracts of DEPs by integrating the results obtained from a mammalian cell bioassay-directed fractionation.

  5. Source apportionment of PM10 and PM2.5 air pollution, and possible impacts of study characteristics in South Korea.

    PubMed

    Ryou, Hyoung Gon; Heo, Jongbae; Kim, Sun-Young

    2018-09-01

    Studies of source apportionment (SA) for particulate matter (PM) air pollution have enhanced understanding of dominant pollution sources and quantification of their contribution. Although there have been many SA studies in South Korea over the last two decades, few studies provided an integrated understanding of PM sources nationwide. The aim of this study was to summarize findings of PM SA studies of South Korea and to explore study characteristics. We selected studies that estimated sources of PM 10 and PM 2.5 performed for 2000-2017 in South Korea using Positive Matrix Factorization and Chemical Mass Balance. We reclassified the original PM sources identified in each study into seven categories: motor vehicle, secondary aerosol, soil dust, biomass/field burning, combustion/industry, natural source, and others. These seven source categories were summarized by using frequency and contribution across four regions, defined by northwest, west, southeast, and southwest regions, by PM 10 and PM 2.5 . We also computed the population-weighted mean contribution of each source category. In addition, we compared study features including sampling design, sampling and lab analysis methods, chemical components, and the inclusion of Asian dust days. In the 21 selected studies, all six PM 10 studies identified motor vehicle, soil dust, and combustion/industry, while all 15 PM 2.5 studies identified motor vehicle and soil dust. Different from the frequency, secondary aerosol produced a large contribution to both PM 10 and PM 2.5 . Motor vehicle contributed highly to both, whereas the contribution of combustion/industry was high for PM 10 . The population-weighted mean contribution was the highest for the motor vehicle and secondary aerosol sources for both PM10 and PM2.5. However, these results were based on different subsets of chemical speciation data collected at a single sampling site, commonly in metropolitan areas, with short overlap and measured by different lab analysis

  6. Inhalable Microorganisms in Beijing’s PM2.5 and PM10 Pollutants during a Severe Smog Event

    PubMed Central

    2014-01-01

    Particulate matter (PM) air pollution poses a formidable public health threat to the city of Beijing. Among the various hazards of PM pollutants, microorganisms in PM2.5 and PM10 are thought to be responsible for various allergies and for the spread of respiratory diseases. While the physical and chemical properties of PM pollutants have been extensively studied, much less is known about the inhalable microorganisms. Most existing data on airborne microbial communities using 16S or 18S rRNA gene sequencing to categorize bacteria or fungi into the family or genus levels do not provide information on their allergenic and pathogenic potentials. Here we employed metagenomic methods to analyze the microbial composition of Beijing’s PM pollutants during a severe January smog event. We show that with sufficient sequencing depth, airborne microbes including bacteria, archaea, fungi, and dsDNA viruses can be identified at the species level. Our results suggested that the majority of the inhalable microorganisms were soil-associated and nonpathogenic to human. Nevertheless, the sequences of several respiratory microbial allergens and pathogens were identified and their relative abundance appeared to have increased with increased concentrations of PM pollution. Our findings may serve as an important reference for environmental scientists, health workers, and city planners. PMID:24456276

  7. Bioassays with terrestrial and aquatic species as monitoring tools of hydrocarbon degradation.

    PubMed

    Bori, Jaume; Vallès, Bettina; Ortega, Lina; Riva, Maria Carme

    2016-09-01

    In this study chemical analyses and ecotoxicity tests were applied for the assessment of a heavily hydrocarbon-contaminated soil prior and after the application of a remediation procedure that consisted in the stimulation of soil autochthonous populations of hydrocarbon degraders in static-ventilated biopiles. Terrestrial bioassays were applied in mixtures of test soils and artificial control soil and studied the survival and reproduction of Eisenia fetida and the avoidance response of E. fetida and Folsomia candida. Effects on aquatic organisms were studied by means of acute tests with Vibrio fischeri, Raphidocelis subcapitata, and Daphnia magna performed on aqueous elutriates from test soils. The bioremediation procedure led to a significant reduction in the concentration of hydrocarbons (from 34264 to 3074 mg kg(-1), i.e., 91 % decrease) and toxicity although bioassays were not able to report a percentage decrease of toxicity as high as the percentage reduction. Sublethal tests proved the most sensitive terrestrial bioassays and avoidance tests with earthworms and springtails showed potential as monitoring tools of hydrocarbon remediation due to their high sensitivity and short duration. The concentrations of hydrocarbons in water extracts from test soils were 130 and 100 μg L(-1) before and after remediation, respectively. Similarly to terrestrial tests, most aquatic bioassays detected a significant reduction in toxicity, which was almost negligible at the end of the treatment. D. magna survival was the most affected by soil elutriates although toxicity to the crustacean was associated to the salinity of the samples rather than to the concentration of hydrocarbons. Ecotoxicity tests with aqueous soil elutriates proved less relevant in the assessment of hydrocarbon-contaminated soils due to the low hydrosolubility of hydrocarbons and the influence of the physicochemical parameters of the aquatic medium.

  8. Trends in arsenic levels in PM10 and PM 2.5 aerosol fractions in an industrialized area.

    PubMed

    García-Aleix, J R; Delgado-Saborit, J M; Verdú-Martín, G; Amigó-Descarrega, J M; Esteve-Cano, V

    2014-01-01

    Arsenic is a toxic element that affects human health and is widely distributed in the environment. In the area of study, the main Spanish and second largest European industrial ceramic cluster, the main source of arsenic aerosol is related to the impurities in some boracic minerals used in the ceramic process. Epidemiological studies on cancer occurrence in Spain points out the study region as one with the greater risk of cancer. Concentrations of particulate matter and arsenic content in PM10 and PM2.5 were measured and characterized by ICP-MS in the area of study during the years 2005-2010. Concentrations of PM10 and its arsenic content range from 27 to 46 μg/m(3) and from 0.7 to 6 ng/m(3) in the industrial area, respectively, and from 25 to 40 μg/m(3) and from 0.7 to 2.8 ng/m(3) in the urban area, respectively. Concentrations of PM2.5 and its arsenic content range from 12 to 14 μg/m(3) and from 0.5 to 1.4 ng/m(3) in the urban background area, respectively. Most of the arsenic content is present in the fine fraction, with ratios of PM2.5/PM10 in the range of 0.65-0.87. PM10, PM2.5, and its arsenic content show a sharp decrease in recent years associated with the economic downturn, which severely hit the production of ceramic materials in the area under study. The sharp production decrease due to the economic crisis combined with several technological improvements in recent years such as substitution of boron, which contains As impurities as raw material, have reduced the concentrations of PM10, PM2.5, and As in air to an extent that currently meets the existing European regulations.

  9. A Novel in vitro Bioassay to Explore the Repellent Effects of Compounds Against Mosquito Aedes aegypti (Diptera: Culicidae).

    PubMed

    Rehman, Junaid U; Tabanca, Nurhayat; Khan, Ikhlas A

    2016-01-01

    Mosquitoes are vectors for many pathogens resulting in many deaths of humans. Repellents play an important role in reducing mosquito bites and the spread of mosquito-borne diseases. Currently, Klun & Debboun (K & D) and human-arm-based bioassay systems are used to identify repellent properties of compounds, extracts, and essential oils. Risks involved with human-arm-based systems are allergic reactions and limited replicates. We are reporting an in vitro bioassay method “NCNPR repellent bioassay (NCNPR-RB)” that can closely simulate the results of the cloth patch bioassay system used to determine repellency against mosquitoes. The NCNPRRB method uses heat to attract mosquito and edible collagen sheets as an alternate to human skin. Multiple plant compounds with documented repellency were tested. DEET (N,N-diethyl-3-methylbenzamide) was used as a positive control. Treatments were prepared in EtOH and applied in dosages ranging from 0.011–1.5mg/cm2 to a 20-cm2 collagen sheet. The number of mosquitoes commencing to bite per probe was recorded visually for 1 min. The minimum effective dosage (mg/cm2) of compounds: DEET (0.021), carvacrol (0.011), thymol (0.013), undecanoic acid (0.023), thymol methyl ether (0.269), and 2-nonanone (>0.375 mg/cm2) determined in NCNPRRB were similar to those reported in literature using a cloth patch bioassay system. The NCNPR-RB can be used to screen compounds with reasonable reproducibility of the data at a faster rate than the cloth patch bioassay, which involves the use of human subjects.

  10. Non-exhaust PM emissions from electric vehicles

    NASA Astrophysics Data System (ADS)

    Timmers, Victor R. J. H.; Achten, Peter A. J.

    2016-06-01

    Particulate matter (PM) exposure has been linked to adverse health effects by numerous studies. Therefore, governments have been heavily incentivising the market to switch to electric passenger cars in order to reduce air pollution. However, this literature review suggests that electric vehicles may not reduce levels of PM as much as expected, because of their relatively high weight. By analysing the existing literature on non-exhaust emissions of different vehicle categories, this review found that there is a positive relationship between weight and non-exhaust PM emission factors. In addition, electric vehicles (EVs) were found to be 24% heavier than equivalent internal combustion engine vehicles (ICEVs). As a result, total PM10 emissions from EVs were found to be equal to those of modern ICEVs. PM2.5 emissions were only 1-3% lower for EVs compared to modern ICEVs. Therefore, it could be concluded that the increased popularity of electric vehicles will likely not have a great effect on PM levels. Non-exhaust emissions already account for over 90% of PM10 and 85% of PM2.5 emissions from traffic. These proportions will continue to increase as exhaust standards improve and average vehicle weight increases. Future policy should consequently focus on setting standards for non-exhaust emissions and encouraging weight reduction of all vehicles to significantly reduce PM emissions from traffic.

  11. Plasmonically amplified bioassay - Total internal reflection fluorescence vs. epifluorescence geometry.

    PubMed

    Hageneder, Simone; Bauch, Martin; Dostalek, Jakub

    2016-08-15

    This paper investigates plasmonic amplification in two commonly used optical configurations for fluorescence readout of bioassays - epifluorescence (EPF) and total internal reflection fluorescence (TIRF). The plasmonic amplification in the EPF configuration was implemented by using crossed gold diffraction grating and Kretschmann geometry of attenuated total reflection method (ATR) was employed in the TIRF configuration. Identical assay, surface architecture for analyte capture, and optics for the excitation, collection and detection of emitted fluorescence light intensity were used in both TIRF and EPF configurations. Simulations predict that the crossed gold diffraction grating (EPF) can amplify the fluorescence signal by a factor of 10(2) by the combination of surface plasmon-enhanced excitation and directional surface plasmon-coupled emission in the red part of spectrum. This factor is about order of magnitude higher than that predicted for the Kretschmann geometry (TIRF) which only took advantage of the surface plasmon-enhanced excitation. When applied for the readout of sandwich interleukin 6 (IL-6) immunoassay, the plasmonically amplified EPF geometry designed for Alexa Fluor 647 labels offered 4-times higher fluorescence signal intensity compared to TIRF. Interestingly, both geometries allowed reaching the same detection limit of 0.4pM despite of the difference in the fluorescence signal enhancement. This is attributed to inherently lower background of fluorescence signal for TIRF geometry compared to that for EPF which compensates for the weaker fluorescence signal enhancement. The analysis of the inflammation biomarker IL-6 in serum at medically relevant concentrations and the utilization of plasmonic amplification for the fluorescence measurement of kinetics of surface affinity reactions are demonstrated for both EPF and TIRF readout. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

  12. [Microplate luminometry for toxicity bioassay of chemicals on luciferase].

    PubMed

    Ge, Hui-Lin; Liu, Shu-Shen; Chen, Fu; Luo, Jin-Hui; Lü, Dai-Zhu; Su, Bing-Xia

    2013-10-01

    A new microplate luminometry for the toxicity bioassay of chemicals on firefly luciferase, was developed using the multifunctional microplate reader (SpectraMax M5) to measure the luminous intensity of luciferase. Efects of luciferase concentration, luciferin concentration, ATP concentration, pH, temperature, and reaction time on the luminescence were systematically investigated. It was found that ATP exerted a biphasic response on the luciferase luminescence and the maximum relative light units (RLU) occurred at an ATP concentration of 1.1 x 10(-4) mol x L(-1). The method was successfully employed in the toxic effect test of NaF, NaCl, KBr and NaBF4 on luciferase. Using nonlinear least square technique, the dose-response curves (DRC) of the 4 chemicals were accurately fitted with the coefficient of determination (R2) between the fitted and observed responses being greater than 0.99. The median effective concentration (EC50) of the 4 chemicals were accurately measured from the DRC models. Compared with some literatures, the bioassay is a fast easy-operate and cost-effective method with high accuracy.

  13. Artificial diets for life tables bioassays of TPB in Mississippi

    USDA-ARS?s Scientific Manuscript database

    Two artificial diets for mass rearing and bioassay of the tarnished plant bug, (TPB), Lygus lineolaris Palisot de Beauvois, (Hemiptera: Miridae) were modified and developed, respectively. The first diet is a modification of a semisolid artificial diet (NI diet), which permits large scale rearing of ...

  14. Tensile fracture of coarse-Grained cast austenitic manganese steels

    NASA Astrophysics Data System (ADS)

    Rittel, D.; Roman, I.

    1988-09-01

    Tensile fracture of coarse-grained (0.25 to 1 mm) cast austenitic manganese (Hadfield) steels has been investigated. Numerous surface discontinuities nucleate in coarse slip bands, on the heavily deformed surface of tensile specimens. These discontinuities do not propagate radially and final fracture results from central specimen cracking at higher strains. On the microscopic scale, bulk voids nucleate during the entire plastic deformation and they do not coalesce by shear localization (e.g., void-sheet) mechanism. Close voids coalesce by internal necking, whereas distant voids are bridged by means of small voids which nucleate at later stages of the plastic deformation. The high toughness of Hadfield steels is due to their high strain-hardening capacity which stabilizes the plastic deformation, and avoids shear localization and loss of load-bearing capacity. The observed dependence of measured mechanical properties on the specimen’s geometry results from the development of a surface layer which charac-terizes the deformation of this coarse-grained material.

  15. Thermodynamically consistent coarse graining of biocatalysts beyond Michaelis–Menten

    NASA Astrophysics Data System (ADS)

    Wachtel, Artur; Rao, Riccardo; Esposito, Massimiliano

    2018-04-01

    Starting from the detailed catalytic mechanism of a biocatalyst we provide a coarse-graining procedure which, by construction, is thermodynamically consistent. This procedure provides stoichiometries, reaction fluxes (rate laws), and reaction forces (Gibbs energies of reaction) for the coarse-grained level. It can treat active transporters and molecular machines, and thus extends the applicability of ideas that originated in enzyme kinetics. Our results lay the foundations for systematic studies of the thermodynamics of large-scale biochemical reaction networks. Moreover, we identify the conditions under which a relation between one-way fluxes and forces holds at the coarse-grained level as it holds at the detailed level. In doing so, we clarify the speculations and broad claims made in the literature about such a general flux–force relation. As a further consequence we show that, in contrast to common belief, the second law of thermodynamics does not require the currents and the forces of biochemical reaction networks to be always aligned.

  16. Hybrid continuum-coarse-grained modeling of erythrocytes

    NASA Astrophysics Data System (ADS)

    Lyu, Jinming; Chen, Paul G.; Boedec, Gwenn; Leonetti, Marc; Jaeger, Marc

    2018-06-01

    The red blood cell (RBC) membrane is a composite structure, consisting of a phospholipid bilayer and an underlying membrane-associated cytoskeleton. Both continuum and particle-based coarse-grained RBC models make use of a set of vertices connected by edges to represent the RBC membrane, which can be seen as a triangular surface mesh for the former and a spring network for the latter. Here, we present a modeling approach combining an existing continuum vesicle model with a coarse-grained model for the cytoskeleton. Compared to other two-component approaches, our method relies on only one mesh, representing the cytoskeleton, whose velocity in the tangential direction of the membrane may be different from that of the lipid bilayer. The finitely extensible nonlinear elastic (FENE) spring force law in combination with a repulsive force defined as a power function (POW), called FENE-POW, is used to describe the elastic properties of the RBC membrane. The mechanical interaction between the lipid bilayer and the cytoskeleton is explicitly computed and incorporated into the vesicle model. Our model includes the fundamental mechanical properties of the RBC membrane, namely fluidity and bending rigidity of the lipid bilayer, and shear elasticity of the cytoskeleton while maintaining surface-area and volume conservation constraint. We present three simulation examples to demonstrate the effectiveness of this hybrid continuum-coarse-grained model for the study of RBCs in fluid flows.

  17. Optimization and field use of a bioassay to monitor sea lice Lepeophtheirus salmonis sensitivity to emamectin benzoate.

    PubMed

    Westcott, Jillian D; Stryhn, Henrik; Burka, John F; Hammell, K Larry

    2008-04-01

    A bioassay for sea lice Lepeophtheirus salmonis sensitivity towards emamectin benzoate (EMB) was validated for field use. A probit regression model with natural responsiveness was used for the number of affected (moribund or dead) sea lice in bioassays involving different concentrations of EMB. Bioassay optimization included an evaluation of the inter-rater reliability of sea lice responsiveness to EMB and an evaluation of gender-related differences in susceptibility. Adoption of a set of bioassay response criteria improved the concordance (evaluated using the concordance correlation coefficient) between raters' assessments and the model estimation of EC50 values (the 'effective concentration' leading to a response of 50% of the lice not prone to natural response). An evaluation of gender-related differences in EMB susceptibility indicated that preadult stage female sea lice exhibited a significantly larger sensitivity towards EMB in 12 of 19 bioassays compared to preadult males. In order to evaluate sea lice sensitivity to EMB in eastern Canada, the intensive salmon farming area in the Bay of Fundy in southwestern New Brunswick was divided into 4 distinct regions based on industry health management practices and hydrographics. A total of 38 bioassays were completed from 2002 to 2005 using populations of preadult stage sea lice collected from Atlantic salmon Salmo salar farms within the 4 described regions. There was no significant overall effect of region or year on EC50 values; however, analysis of variance indicated a significant effect of time of year on EC50 values in 2002 and a potential effect in 2004 to 2005. Although the range of EC50 values obtained in this 3 yr study did not appear sufficient to affect current clinical success in the control of sea lice, the results suggest a seasonal- or temperature-associated variation in sensitivity to EMB. This will need to be considered if changes in EMB efficacy occur in the future.

  18. PM composition and source reconciliation in Mexico City

    NASA Astrophysics Data System (ADS)

    Mugica, V.; Ortiz, E.; Molina, L.; De Vizcaya-Ruiz, A.; Nebot, A.; Quintana, R.; Aguilar, J.; Alcántara, E.

    PM 2.5 and PM 10 were collected during 24-h sampling intervals from March 1st to 31st, 2006 during the MILAGRO campaign carried out in Mexico City's northern region, in order to determine their chemical composition, oxidative activity and the estimation of the source contributions during the sampling period by means of the chemical mass balance (CMB) receptor model. PM 2.5 concentrations ranged from 32 to 70 μg m -3 while that of PM10 did so from 51 to 132 μg m -3. The most abundant chemical species for both PM fractions were: OC, EC, SO 42-, NO 3-, NH 4+, Si, Fe and Ca. The majority of the PM mass was comprised of carbon, up to about 52% and 30% of the PM2.5 and PM10, respectively. PM2.5 constituted more than 50% of PM10. The redox activity, assessed by the dithiothreitol (DTT) assay, was greater for PM 2.5 than for PM 10, and did not display significant differences during the sampling period. The PM 2.5 source reconciliation showed that in average, vehicle exhaust emissions were its most important source in an urban site with a 42% contribution, followed by re-suspended dust with 26%, secondary inorganic aerosols with 11%, and industrial emissions and food cooking with 10% each. These results had a good agreement with the Emission Inventory. In average, the greater mass concentration occurred during O 3S that corresponds to a wind shift initially with transport to the South but moving back to the North. Taken together these results show that PM chemical composition, oxidative potential, and source contribution is influenced by the meteorological conditions.

  19. Measurement of light scattering in an urban area with a nephelometer and PM2.5 FDMS TEOM monitor: accounting for the effect of water.

    PubMed

    Cropper, Paul M; Hansen, Jaron C; Eatough, Delbert J

    2013-09-01

    The US. Environmental Protection Agency (EPA) has proposed a new secondary standard based on visibility in urban areas. The proposed standard will be based on light extinction, calculated from 24-hr averaged measurements. It would be desirable to base the standard on a shorter averaging time to better represent human perception of visibility This could be accomplished by either an estimation of extinction from semicontinuous particulate matter (PM) data or direct measurement of scattering and absorption. To this end we have compared 1-hr measurements of fine plus coarse particulate scattering using a nephelometer along with an estimate of absorption from aethalometer measurements. The study took place in Lindon, UT, during February and March 2012. The nephelometer measurements were corrected for coarse particle scattering and compared to the Filter Dynamic Measurement System (FDMS) tapered element oscillating microbalance monitor (TEOM) PM2.5 measurements. The two measurements agreed with a mass scattering coefficient of 3.3 +/- 0.3 m2/g at relative humidity below 80%. However at higher humidity, the nephelometer gave higher scattering results due to water absorbed by ammonium nitrate and ammonium sulfate in the particles. This particle-associated water is not measured by the FDMS TEOM. The FDMS TEOM data could be corrected for this difference using appropriate IMPROVE protocols if the particle composition is known. However a better approach may be to use a particle measurement system that allows for semicontinuous measurements but also measures particle bound water Data are presented from a 2003 study in Rubidoux, CA, showing how this could be accomplished using a Grimm model 1100 aerosol spectrometer or comparable instrument.

  20. Effects of coarse aggregate on the physical properties of Florida concrete mixes.

    DOT National Transportation Integrated Search

    2015-10-01

    Portland cement concrete is a heterogeneous, composite material composed of coarse and fine granular material : embedded in a matrix of hardened paste. The coarse material is aggregate, which is primarily used as inexpensive filler : and comprises th...

  1. COMPARISON OF BIOASSAY AND ENZYME-LINKED IMMUNOSORBENT ASSAY FOR QUANTIFICATION OF 'SPODOPTERA FRUGIPERDA' NUCLEAR POLYHEDROSIS VIRUS IN SOIL

    EPA Science Inventory

    Standard curves with known amounts of Spodoptera frugiperda nuclear polyhedrosis virus (NPV) in soil were established with a bioassay and with an enzyme-linked immunosorbent assay (ELISA). The bioassay detected as few as 4 x 10 to the 4th power polyhedral inclusion bodies (PIB)/g...

  2. Accurate reconstruction of 3D cardiac geometry from coarsely-sliced MRI.

    PubMed

    Ringenberg, Jordan; Deo, Makarand; Devabhaktuni, Vijay; Berenfeld, Omer; Snyder, Brett; Boyers, Pamela; Gold, Jeffrey

    2014-02-01

    We present a comprehensive validation analysis to assess the geometric impact of using coarsely-sliced short-axis images to reconstruct patient-specific cardiac geometry. The methods utilize high-resolution diffusion tensor MRI (DTMRI) datasets as reference geometries from which synthesized coarsely-sliced datasets simulating in vivo MRI were produced. 3D models are reconstructed from the coarse data using variational implicit surfaces through a commonly used modeling tool, CardioViz3D. The resulting geometries were then compared to the reference DTMRI models from which they were derived to analyze how well the synthesized geometries approximate the reference anatomy. Averaged over seven hearts, 95% spatial overlap, less than 3% volume variability, and normal-to-surface distance of 0.32 mm was observed between the synthesized myocardial geometries reconstructed from 8 mm sliced images and the reference data. The results provide strong supportive evidence to validate the hypothesis that coarsely-sliced MRI may be used to accurately reconstruct geometric ventricular models. Furthermore, the use of DTMRI for validation of in vivo MRI presents a novel benchmark procedure for studies which aim to substantiate their modeling and simulation methods using coarsely-sliced cardiac data. In addition, the paper outlines a suggested original procedure for deriving image-based ventricular models using the CardioViz3D software. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  3. Trends and variability of atmospheric PM2.5 and PM10-2.5 concentration in the Po Valley, Italy

    NASA Astrophysics Data System (ADS)

    Bigi, Alessandro; Ghermandi, Grazia

    2016-12-01

    The Po Valley is one of the largest European regions with a remarkably high concentration level of atmospheric pollutants, both for particulate and gaseous compounds. In the last decade stringent regulations on air quality standards and on anthropogenic emissions have been set by the European Commission, including also for PM2.5 and its main components since 2008. These regulations have led to an overall improvement in air quality across Europe, including the Po Valley and specifically PM10, as shown in a previous study by Bigi and Ghermandi (2014). In order to assess the trend and variability in PM2.5 in the Po Valley and its role in the decrease in PM10, we analysed daily gravimetric equivalent concentration of PM2.5 and of PM10-2.5 at 44 and 15 sites respectively across the Po Valley. The duration of the times series investigated in this work ranges from 7 to 10 years. For both PM sizes, the trend in deseasonalized monthly means, annual quantiles and in monthly frequency distribution was estimated: this showed a significant decreasing trend at several sites for both size fractions and mostly occurring in winter. All series were tested for a significant weekly periodicity (a proxy to estimate the impact of primary anthropogenic emissions), yielding positive results for summer PM2.5 and for summer and winter PM10-2.5. Hierarchical cluster analysis showed moderate variability in PM2.5 across the valley, with two to three main clusters, dividing the area in western, eastern and southern/Apennines foothill sectors. The trend in atmospheric concentration was compared with the time series of local emissions, vehicular fleet details and fuel sales, suggesting that the decrease in PM2.5 and in PM10 originates from a drop both in primary and in precursors of secondary inorganic aerosol emissions, largely ascribed to vehicular traffic. Potentially, the increase in biomass burning emissions in winter and the modest decrease in NH3 weaken an otherwise even larger drop in

  4. Coarse graining flow of spin foam intertwiners

    NASA Astrophysics Data System (ADS)

    Dittrich, Bianca; Schnetter, Erik; Seth, Cameron J.; Steinhaus, Sebastian

    2016-12-01

    Simplicity constraints play a crucial role in the construction of spin foam models, yet their effective behavior on larger scales is scarcely explored. In this article we introduce intertwiner and spin net models for the quantum group SU (2 )k×SU (2 )k, which implement the simplicity constraints analogous to four-dimensional Euclidean spin foam models, namely the Barrett-Crane (BC) and the Engle-Pereira-Rovelli-Livine/Freidel-Krasnov (EPRL/FK) model. These models are numerically coarse grained via tensor network renormalization, allowing us to trace the flow of simplicity constraints to larger scales. In order to perform these simulations we have substantially adapted tensor network algorithms, which we discuss in detail as they can be of use in other contexts. The BC and the EPRL/FK model behave very differently under coarse graining: While the unique BC intertwiner model is a fixed point and therefore constitutes a two-dimensional topological phase, BC spin net models flow away from the initial simplicity constraints and converge to several different topological phases. Most of these phases correspond to decoupling spin foam vertices; however we find also a new phase in which this is not the case, and in which a nontrivial version of the simplicity constraints holds. The coarse graining flow of the BC spin net models indicates furthermore that the transitions between these phases are not of second order. The EPRL/FK model by contrast reveals a far more intricate and complex dynamics. We observe an immediate flow away from the original simplicity constraints; however, with the truncation employed here, the models generically do not converge to a fixed point. The results show that the imposition of simplicity constraints can indeed lead to interesting and also very complex dynamics. Thus we need to further develop coarse graining tools to efficiently study the large scale behavior of spin foam models, in particular for the EPRL/FK model.

  5. Bryophyte species associations with coarse woody debris and stand ages in Oregon

    USGS Publications Warehouse

    Rambo, T.; Muir, Patricia S.

    1998-01-01

    We quantified the relationships of 93 forest floor bryophyte species, including epiphytes from incorporated litterfall, to substrate and stand age in Pseudotsuga menziesii-Tsuga heterophylla stands at two sites in western Oregon. We used the method of Dufrêne and Legendre that combines a species' relative abundance and relative frequency, to calculate that species' importance in relation to environmental variables. The resulting "indicator value" describes a species' reliability for indicating the given environmental parameter. Thirty-nine species were indicative of either humus, a decay class of coarse woody debris, or stand age. Bryophyte community composition changed along the continuum of coarse woody debris decomposition from recently fallen trees with intact bark to forest floor humus. Richness of forest floor bryophytes will be enhanced when a full range of coarse woody debris decay classes is present. A suite of bryophytes indicated old-growth forest. These were mainly either epiphytes associated with older conifers or liverworts associated with coarse woody debris. Hardwood-associated epiphytes mainly indicated young stands. Mature conifers, hardwoods, and coarse woody debris are biological legacies that can be protected when thinning managed stands to foster habitat complexity and biodiversity, consistent with an ecosystem approach to forest management.

  6. Sampling method, storage and pretreatment of sediment affect AVS concentrations with consequences for bioassay responses.

    PubMed

    De Lange, H J; Van Griethuysen, C; Koelmans, A A

    2008-01-01

    Sediment treatment and sediment storage may alter sediment toxicity, and consequently biotic response. Purpose of our study was to combine these three aspects (treatment-toxicity-biotic response) in one integrated approach. We used Acid Volatile Sulfide (AVS) concentrations as a proxy of the disturbance of the sediment. AVS and Simultaneously Extracted Metal (SEM) concentrations were compared to bioassay responses with the freshwater benthic macroinvertebrate Asellus aquaticus. Storage conditions and sediment treatment affected AVS but not SEM levels. AVS can be used as a proxy for sediment disturbance. The best way to pretreat the sediment for use in a bioassay in order to maintain initial AVS conditions was to sample the sediment with an Ekman grab, immediately store it in a jar without headspace, and freeze it as soon as possible. In a survey using seven different sediments, bioassay responses of A. aquaticus were correlated with SEM and AVS characteristics.

  7. The combustion of sound and rotten coarse woody debris: a review

    Treesearch

    Joshua C. Hyde; Alistair M.S. Smith; Roger D. Ottmar; Ernesto C. Alvarado; Penelope Morgan

    2011-01-01

    Coarse woody debris serves many functions in forest ecosystem processes and has important implications for fire management as it affects air quality, soil heating and carbon budgets when it combusts. There is relatively little research evaluating the physical properties relating to the combustion of this coarse woody debris with even less specifically addressing...

  8. Bioassays Based on Molecular Nanomechanics

    DOE PAGES

    Majumdar, Arun

    2002-01-01

    Recent experiments have shown that when specific biomolecular interactions are confined to one surface of a microcantilever beam, changes in intermolecular nanomechanical forces provide sufficient differential torque to bend the cantilever beam. This has been used to detect single base pair mismatches during DNA hybridization, as well as prostate specific antigen (PSA) at concentrations and conditions that are clinically relevant for prostate cancer diagnosis. Since cantilever motion originates from free energy change induced by specific biomolecular binding, this technique is now offering a common platform for label-free quantitative analysis of protein-protein binding, DNA hybridization DNA-protein interactions, and in general receptor-ligandmore » interactions. Current work is focused on developing “universal microarrays” of microcantilever beams for high-throughput multiplexed bioassays.« less

  9. Cryopreserved semen in ecotoxicological bioassays: sensitivity and reliability of cryopreserved Sparus aurata spermatozoa.

    PubMed

    Fabbrocini, Adele; D'Adamo, Raffaele; Del Prete, Francesco; Langellotti, Antonio Luca; Rinna, Francesca; Silvestri, Fausto; Sorrenti, Gerarda; Vitiello, Valentina; Sansone, Giovanni

    2012-10-01

    The aim of this study was to evaluate the feasibility of using cryopreserved S. aurata semen in spermiotoxicity tests. Cryopreservation is a biotechnology that can provide viable gametes and embryos on demand, rather than only in the spawning season, thus overcoming a limitation that has hindered the use of some species in ecotoxicological bioassays. Firstly, the sperm motility pattern of cryopreserved semen was evaluated after thawing by means of both visual and computer-assisted analyses. Motility parameters in the cryopreserved semen did not change significantly in the first hour after thawing, meaning that they were maintained for long enough to enable their use in spermiotoxicity tests. In the second phase of the research, bioassays were performed, using cadmium as the reference toxicant, in order to evaluate the sensitivity of cryopreserved S. aurata semen to ecotoxicological contamination. The sensitivity of the sperm motility parameters used as endpoints (motility percentages and velocities) proved to be comparable to what has been recorded for the fresh semen of other aquatic species (LOECs from 0.02 to 0.03 mg L(-1)). The test showed good reliability and was found to be rapid and easy to perform, requiring only a small volume of the sample. Moreover, cryopreserved semen is easy to store and transfer and makes it possible to perform bioassays in different sites or at different times with the same batch of semen. The proposed bioassay is therefore a promising starting point for the development of toxicity tests that are increasingly tailored to the needs of ecotoxicology and environmental quality evaluation strategies. Copyright © 2012 Elsevier Inc. All rights reserved.

  10. UTILITY OF A FULL LIFE-CYCLE COPEPOD BIOASSAY APPROACH FOR ASSESSMENT OF SEDIMENT-ASSOCIATED CONTAMINANT MIXTURES. (R825279)

    EPA Science Inventory

    Abstract

    We compared a 21 day full life-cycle bioassay with an existing 14 day partial life-cycle bioassay for two species of meiobenthic copepods, Microarthridion littorale and Amphiascus tenuiremis. We hypothesized that full life-cycle tests would bette...

  11. 10 Yr Spatial and Temporal Trends of PM2.5 Concentrations in the Southeastern US Estimated Using High-resolution Satellite Data

    NASA Technical Reports Server (NTRS)

    Hu, X.; Waller, L. A.; Lyapustin, A.; Wang, Y.; Liu, Y.

    2013-01-01

    Long-term PM2.5 exposure has been reported to be associated with various adverse health outcomes. However, most ground monitors are located in urban areas, leading to a potentially biased representation of the true regional PM2.5 levels. To facilitate epidemiological studies, accurate estimates of spatiotemporally continuous distribution of PM2.5 concentrations are essential. Satellite-retrieved aerosol optical depth (AOD) has been widely used for PM2.5 concentration estimation due to its comprehensive spatial coverage. Nevertheless, an inherent disadvantage of current AOD products is their coarse spatial resolutions. For instance, the spatial resolutions of the Moderate Resolution Imaging Spectroradiometer (MODIS) and the Multiangle Imaging SpectroRadiometer (MISR) are 10 km and 17.6 km, respectively. In this paper, a new AOD product with 1 km spatial resolution retrieved by the multi-angle implementation of atmospheric correction (MAIAC) algorithm was used. A two-stage model was developed to account for both spatial and temporal variability in the PM2.5-AOD relationship by incorporating the MAIAC AOD, meteorological fields, and land use variables as predictors. Our study area is in the southeastern US, centered at the Atlanta Metro area, and data from 2001 to 2010 were collected from various sources. The model was fitted for each year individually, and we obtained model fitting R2 ranging from 0.71 to 0.85, MPE from 1.73 to 2.50 g m3, and RMSPE from 2.75 to 4.10 g m3. In addition, we found cross validation R2 ranging from 0.62 to 0.78, MPE from 2.00 to 3.01 g m3, and RMSPE from 3.12 to 5.00 g m3, indicating a good agreement between the estimated and observed values. Spatial trends show that high PM2.5 levels occurred in urban areas and along major highways, while low concentrations appeared in rural or mountainous areas. A time series analysis was conducted to examine temporal trends of PM2.5 concentrations in the study area from 2001 to 2010. The results showed

  12. On coarse projective integration for atomic deposition in amorphous systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chuang, Claire Y., E-mail: yungc@seas.upenn.edu, E-mail: meister@unm.edu, E-mail: zepedaruiz1@llnl.gov; Sinno, Talid, E-mail: talid@seas.upenn.edu; Han, Sang M., E-mail: yungc@seas.upenn.edu, E-mail: meister@unm.edu, E-mail: zepedaruiz1@llnl.gov

    2015-10-07

    Direct molecular dynamics simulation of atomic deposition under realistic conditions is notoriously challenging because of the wide range of time scales that must be captured. Numerous simulation approaches have been proposed to address the problem, often requiring a compromise between model fidelity, algorithmic complexity, and computational efficiency. Coarse projective integration, an example application of the “equation-free” framework, offers an attractive balance between these constraints. Here, periodically applied, short atomistic simulations are employed to compute time derivatives of slowly evolving coarse variables that are then used to numerically integrate differential equations over relatively large time intervals. A key obstacle to themore » application of this technique in realistic settings is the “lifting” operation in which a valid atomistic configuration is recreated from knowledge of the coarse variables. Using Ge deposition on amorphous SiO{sub 2} substrates as an example application, we present a scheme for lifting realistic atomistic configurations comprised of collections of Ge islands on amorphous SiO{sub 2} using only a few measures of the island size distribution. The approach is shown to provide accurate initial configurations to restart molecular dynamics simulations at arbitrary points in time, enabling the application of coarse projective integration for this morphologically complex system.« less

  13. Coarse-grained Simulations of Conformational Changes in Multidrug Resistance Transporters

    NASA Astrophysics Data System (ADS)

    Jewel, S. M. Yead; Dutta, Prashanta; Liu, Jin

    2016-11-01

    The overexpression of multidrug resistance (MDR) systems on the gram negative bacteria causes serious problems for treatment of bacterial infectious diseases. The system effectively pumps the antibiotic drugs out of the bacterial cells. During the pumping process one of the MDR components, AcrB undergoes a series of large-scale conformational changes which are responsible for drug recognition, binding and expelling. All-atom simulations are unable to capture those conformational changes because of computational cost. Here, we implement a hybrid coarse-grained force field that couples the united-atom protein models with the coarse-grained MARTINI water/lipid, to investigate the proton-dependent conformational changes of AcrB. The simulation results in early stage ( 100 ns) of proton-dependent conformational changes agree with all-atom simulations, validating the coarse-grained model. The coarse-grained force field allows us to explore the process in microsecond simulations. Starting from the crystal structures of Access(A)/Binding(B)/Extrusion(E) monomers in AcrB, we find that deprotonation of Asp407 and Asp408 in monomer E causes a series of large-scale conformational changes from ABE to AAA in absence of drug molecules, which is consistent with experimental findings. This work is supported by NIH Grant: 1R01GM122081-01.

  14. On Coarse Projective Integration for Atomic Deposition in Amorphous Systems

    DOE PAGES

    Chuang, Claire Y.; Han, Sang M.; Zepeda-Ruiz, Luis A.; ...

    2015-10-02

    Direct molecular dynamics simulation of atomic deposition under realistic conditions is notoriously challenging because of the wide range of timescales that must be captured. Numerous simulation approaches have been proposed to address the problem, often requiring a compromise between model fidelity, algorithmic complexity and computational efficiency. Coarse projective integration, an example application of the ‘equation-free’ framework, offers an attractive balance between these constraints. Here, periodically applied, short atomistic simulations are employed to compute gradients of slowly-evolving coarse variables that are then used to numerically integrate differential equations over relatively large time intervals. A key obstacle to the application of thismore » technique in realistic settings is the ‘lifting’ operation in which a valid atomistic configuration is recreated from knowledge of the coarse variables. Using Ge deposition on amorphous SiO 2 substrates as an example application, we present a scheme for lifting realistic atomistic configurations comprised of collections of Ge islands on amorphous SiO 2 using only a few measures of the island size distribution. In conclusion, the approach is shown to provide accurate initial configurations to restart molecular dynamics simulations at arbitrary points in time, enabling the application of coarse projective integration for this morphologically complex system.« less

  15. 40 CFR 1065.290 - PM gravimetric balance.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 34 2012-07-01 2012-07-01 false PM gravimetric balance. 1065.290 Section 1065.290 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR POLLUTION CONTROLS ENGINE-TESTING PROCEDURES Measurement Instruments Pm Measurements § 1065.290 PM gravimetric...

  16. 40 CFR 1065.290 - PM gravimetric balance.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 33 2014-07-01 2014-07-01 false PM gravimetric balance. 1065.290 Section 1065.290 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR POLLUTION CONTROLS ENGINE-TESTING PROCEDURES Measurement Instruments Pm Measurements § 1065.290 PM gravimetric...

  17. 40 CFR 1065.290 - PM gravimetric balance.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 34 2013-07-01 2013-07-01 false PM gravimetric balance. 1065.290 Section 1065.290 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) AIR POLLUTION CONTROLS ENGINE-TESTING PROCEDURES Measurement Instruments Pm Measurements § 1065.290 PM gravimetric...

  18. Characterization of carbonaceous materials in PM2.5 and PM10 size fractions in Morogoro, Tanzania, during 2006 wet season campaign

    NASA Astrophysics Data System (ADS)

    Mkoma, Stelyus L.; Chi, Xuguang; Maenhaut, Willy

    2010-05-01

    Atmospheric aerosol samples in PM10 and PM2.5 size fractions were collected in parallel at a rural site in Morogoro during wet season in March and April 2006. All samples were analysed for the particulate matter mass, for organic, elemental, and total carbon (OC, EC, and TC), and for water-soluble OC (WSOC). The average PM10 and PM2.5 mass concentrations and associated standard deviations were 14 ± 13 μg/m 3 and 7.3 ± 4 μg/m 3 respectively. On average, TC accounted for 33% of the PM10 mass and 44% of the PM2.5 mass for the campaign. The average OC/PM percentage ratios were 27% and 33% in PM10 and PM2.5 size fractions respectively and a larger fraction of the OC was water-soluble. The observed low EC/TC mean percentage ratios of 10-14% respectively for PM10 and PM2.5 fractions indicate that the carbonaceous aerosol originates mainly from biogenic aerosols and/or biomass burning. A simple source apportionment approach was used to apportion the OC to biofuel and charcoal burning. On average, 93% of the PM10 OC was attributed to biofuel and 7% to charcoal burning in the 2006 wet season campaign. However, it is suggested that a contribution to the OC at Morogoro could also come from other natural biogenic matter, and/or biomass burning aerosols. The results for the sources of OC at Morogoro should therefore be considered with great caution.

  19. Statistical considerations in the analysis of data from replicated bioassays

    USDA-ARS?s Scientific Manuscript database

    Multiple-dose bioassay is generally the preferred method for characterizing virulence of insect pathogens. Linear regression of probit mortality on log dose enables estimation of LD50/LC50 and slope, the latter having substantial effect on LD90/95s (doses of considerable interest in pest management)...

  20. Identification of dicarboxylic acids and aldehydes of PM10 and PM2.5 aerosols in Nanjing, China

    NASA Astrophysics Data System (ADS)

    Wang, Gehui; Niu, Sulian; Liu, Caie; Wang, Liansheng

    In this study aerosol samples of PM10 and PM2.5 collected from 18 February 2001 to 1 May 2001 in Nanjing, China were analyzed for their water-soluble organic compounds. A series of homologous dicarboxylic acids (C 2-10) and two kinds of aldehydes (methylglyoxal and 2-oxo-malonaldehyde) were detected by GC and GC/MS. Among the identified compounds, the concentration of oxalic acid was the highest at all the five sites, which ranged from 178 to 1423 ng/m 3. The second highest concentration of dicarboxylic acids were malonic and succinic acids, which ranged from 26.9 to 243 ng/m 3. Higher level of azelaic acid was also observed, of which the maximum was 301 ng/m 3. As the highest fraction of dicarboxylic acids, oxalic acid comprised from 28% to 86% of total dicarboxylic acids in PM10 and from 41% to 65% of total dicarboxylic acids in PM2.5. The dicarboxylic acids (C 2, C 3, C 4) together accounted for 38-95% of total dicarboxylic acids in PM10 and 59-87% of dicarboxylic acids in PM2.5. In this study, the total dicarboxylic acids accounted for 2.8-7.9% of total organic carbon (TOC) of water-soluble matters for PM10 and 3.4-11.8% of TOC for PM2.5. All dicarboxylic acids detected in this study together accounted for about 1% of particle mass. The concentration of azelaic acid was higher at one site than others, which may be resulted from higher level of volatile fat used for cooking. The amounts of dicarboxyic acids (C 2,3,4,9) and 2-oxo-malonaldehyde of PM2.5 were higher in winter and lower in spring. Compared with other major metropolitans in the world, the level of oxalic acid concentration of Nanjing is much higher, which may be contributed to higher level of particle loadings, especially for fine particles.