Carbonate dissolution in the South Atlantic Ocean: evidence from ultrastructure breakdown in Globigerina bulloides

NASA Astrophysics Data System (ADS)

Dittert, Nicolas; Henrich, Rüdiger

2000-04-01

Ultrastructure dissolution susceptibility of the planktic foraminifer Globigerina bulloides, carbonate ion content of the water column, calcium carbonate content of the sediment surface, and carbonate/carbon weight percentage ratio derived from sediment surface samples were investigated in order to reconstruct the position of the calcite saturation horizon, the sedimentary calcite lysocline, and the calcium carbonate compensation depth (CCD) in the modern South Atlantic Ocean. Carbonate ion data from the water column refer to the GEOSECS locations 48, 103, and 109 and calcium carbonate data come from 19 GeoB sediment surface samples of 4 transects into the Brazil, the Guinea, and the Cape Basins. We present a new (paleo-) oceanographic tool, namely the Globigerina bulloides dissolution index (BDX). Further, we give evidence (a) for progressive G. bulloides ultrastructural breakdown with increasing carbonate dissolution even above the lysocline; (b) for a sharp BDX increase at the sedimentary lysocline; and (c) for the total absence of this species at the CCD. BDX puts us in the position to distinguish the upper open ocean and the upwelling influenced continental margin above from the deep ocean below the sedimentary lysocline. Carbonate ion data from water column samples, calcite weight percentage data from surface sediment samples, and carbonate/carbon weight percentage ratio appear to be good proxies to confirm BDX. As shown by BDX both the calcite saturation horizon (in the water column) and the sedimentary lysocline (at the sediment-water interface) mark the boundary between the carbonate ion undersaturated and highly corrosive Antarctic Bottom Water and the carbonate ion saturated North Atlantic Deep Water (NADW) of the modern South Atlantic.

Accumulation of sediment-associated viruses in shellfish.

PubMed Central

Landry, E F; Vaughn, J M; Vicale, T J; Mann, R

1983-01-01

The present study focused on the importance of contaminated sediments in shellfish accumulation of human viruses. Epifaunal (Crassostrea virginica) and infaunal (Mercenaria mercenaria) shellfish, placed on or in cores, were exposed to either resuspended or undisturbed sediments containing bound poliovirus type 1 (LSc 2ab). Consistent bioaccumulation by oysters (four of five trials) was only noted when sediment-bound viruses occurred in the water column. Virus accumulation was observed in a single instance where sediments remained in an undisturbed state. While the incidence of bioaccumulation was higher with resuspended rather than undisturbed contaminated sediment, the actual concentration of accumulated viruses was not significantly different. The accumulation of viruses from oysters residing on uninoculated sediments. When clams were exposed to undisturbed, virus-contaminated sediments, two of five shellfish pools yielded viral isolates. Bioaccumulation of undisturbed sediments by these bivalves was considered marginal when related to the concentration of virus in contaminated sediments; they would only represent a significant threat when suspended in the water column. Arguments were advanced for water-column sampling in the region of the water-sediment interface to provide an accurate determination of the virological quality of shellfish harvesting waters. PMID:6297392

[Analysis of short-chain chlorinated paraffins in sediment samples from the mouth of the Daliao River by HRGC/ECNI-LRMS].

PubMed

Gao, Yuan; Wang, Cheng; Zhang, Hai-jun; Zou, Li-li; Tian, Yu-zeng; Chen, Ji-ping

2010-08-01

An analytical method for quantifying short-chain chlorinated paraffins (SCCPs) by high-resolution gas chromatography/electron capture negative ion low-resolution mass spectrometry (HRGC/ECNI-LRMS) was presented. The cleanup procedure with an acid silica gel column and activated neutral alumina column was optimized to remove the interferences. As illustration of the application of the method to environmental samples, it is found that lower chlorinated C10 and C11 compounds were the main SCCPs compounds in six sediment samples from the mouth of the Daliao River. The concentrations of SCCPs in sediments were determined to be in the range of 64.9-407.0 ng/g and showed a decreasing tendency from the shore to the remote location.

DEVELOPMENT AND APPLICATION OF IMMUNOAFFINITY COLUMN CHROMATOGRAPHY AS A CLEANUP METHOD FOR THE DETERMINATION OF ATRAZINE IN COMPLEX ENVIRONMENTAL SAMPLE MEDIA

EPA Science Inventory

A rabbit antibody immunoaffinity (IA) column procedure was evaluated as a cleanup method for the determination of atrazine in soil, sediment, and food. Four IA columns were prepared by immobilizing a polyclonal rabbit anti-atrazine antibody solution to HiTrap Sepharose columns. A...

Extraction and speciation of arsenic in lacustrine sediments

USGS Publications Warehouse

Ficklin, W.H.

1990-01-01

Arsenic was partially extracted with 4.OM hydrochloric acid, from samples collected at 25-cm intervals in a 350-cm column of sediment at Milltown Reservoir, Montana and from a 60-cm core of sediment collected at the Cheyenne River Embayment of Lake Oahe, South Dakota. The sediment in both reservoirs is highly contaminated with arsenic. The extracted arsenic was separated into As(III) and As(V) on acetate form Dowex 1-X8 ion-exchange resin with 0.12M HCl eluent. Residual arsenic was sequentially extracted with KClO3 and HCl. Arsenic was determined by graphite-furnace atomic-absorption spectrometry. The analytical results define oxidized and reduced zones in the sediment columns. ?? 1990.

Phosphate-Induced Immobilization of Uranium in Hanford Sediments.

PubMed

Pan, Zezhen; Giammar, Daniel E; Mehta, Vrajesh; Troyer, Lyndsay D; Catalano, Jeffrey G; Wang, Zheming

2016-12-20

Phosphate can be added to subsurface environments to immobilize U(VI) contamination. The efficacy of immobilization depends on the site-specific groundwater chemistry and aquifer sediment properties. Batch and column experiments were performed with sediments from the Hanford 300 Area in Washington State and artificial groundwater prepared to emulate the conditions at the site. Batch experiments revealed enhanced U(VI) sorption with increasing phosphate addition. X-ray absorption spectroscopy measurements of samples from the batch experiments found that U(VI) was predominantly adsorbed at conditions relevant to the column experiments and most field sites (low U(VI) loadings, <25 μM), and U(VI) phosphate precipitation occurred only at high initial U(VI) (>25 μM) and phosphate loadings. While batch experiments showed the transition of U(VI) uptake from adsorption to precipitation, the column study was more directly relevant to the subsurface environment because of the high solid:water ratio in the column and the advective flow of water. In column experiments, nearly six times more U(VI) was retained in sediments when phosphate-containing groundwater was introduced to U(VI)-loaded sediments than when the groundwater did not contain phosphate. This enhanced retention persisted for at least one month after cessation of phosphate addition to the influent fluid. Sequential extractions and laser-induced fluorescence spectroscopy of sediments from the columns suggested that the retained U(VI) was primarily in adsorbed forms. These results indicate that in situ remediation of groundwater by phosphate addition provides lasting benefit beyond the treatment period via enhanced U(VI) adsorption to sediments.

Phosphate-Induced Immobilization of Uranium in Hanford Sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pan, Zezhen; Giammar, Daniel E.; Mehta, Vrajesh

2016-12-20

Phosphate can be added to subsurface environments to immobilize U(VI) contamination. The efficacy of immobilization depends on the site-specific groundwater chemistry and aquifer sediment properties. Batch and column experiments were performed with sediments from the Hanford 300 Area in Washington State and artificial groundwater prepared to emulate the conditions at the site. Batch experiments revealed enhanced U(VI) sorption with increasing phosphate addition. X-ray absorption spectroscopy measurements of samples from the batch experiments found that U(VI) was predominantly adsorbed at conditions relevant to the column experiments and most field sites (low U(VI) loadings, <25 μM), and U(VI) phosphate precipitation occurred onlymore » at high initial U(VI) (>25 μM) and phosphate loadings. While batch experiments showed the transition of U(VI) uptake from adsorption to precipitation, the column study was more directly relevant to the subsurface environment because of the high solid:water ratio in the column and the advective flow of water. In column experiments, nearly six times more U(VI) was retained in sediments when phosphate-containing groundwater was introduced to U(VI)-loaded sediments than when the groundwater did not contain phosphate. This enhanced retention persisted for at least one month after cessation of phosphate addition to the influent fluid. Sequential extractions and laser-induced fluorescence spectroscopy of sediments from the columns suggested that the retained U(VI) was primarily in adsorbed forms. These results indicate that in situ remediation of groundwater by phosphate addition provides lasting benefit beyond the treatment period via enhanced U(VI) adsorption to sediments.« less

Phosphate-Induced Immobilization of Uranium in Hanford Sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pan, Zezhen; Giammar, Daniel E.; Mehta, Vrajesh

2016-12-20

Phosphate can be added to subsurface environments to immobilize U(VI) contamination. The efficacy of immobilization depends on the site-specific groundwater chemistry and aquifer sediment properties. Batch and column experiments were performed with sediments from the Hanford 300 Area in Washington State and artificial groundwater prepared to emulate the conditions at the site. Batch experiments revealed enhanced U(VI) sorption with increasing phosphate addition. X-ray absorption spectroscopy measurements of samples from the batch experiments found that U(VI) was predominantly adsorbed at conditions relevant to the column experiments and most field sites (low U(VI) loadings, <25 μM), and U(VI) phosphate precipitation occurred onlymore » at high initial U(VI) (>25μM) and phosphate loadings. While batch experiments showed the transition of U(VI) uptake from adsorption to precipitation, the column study was more directly relevant to the subsurface environment because of the high solid:water ratio in the column and the advective flow of water. In column experiments, nearly six times more U(VI) was retained in sediments when phosphate-containing groundwater was introduced to U(VI)-loaded sediments than when the groundwater did not contain phosphate. This enhanced retention persisted for at least one month after cessation of phosphate addition to the influent fluid. Sequential extractions and laser-induced fluorescence spectroscopy of sediments from the columns suggested that the retained U(VI) was primarily in adsorbed forms. These results indicate that in situ remediation of groundwater by phosphate addition provides lasting benefit beyond the treatment period via enhanced U(VI) adsorption to sediments.« less

Footprints of Urban Micro-Pollution in Protected Areas: Investigating the Longitudinal Distribution of Perfluoroalkyl Acids in Wildlife Preserves

PubMed Central

Rodriguez-Jorquera, Ignacio A.; Silva-Sanchez, Cecilia; Strynar, Mark; Denslow, Nancy D.; Toor, Gurpal S.

2016-01-01

Current approaches to protect biodiversity by establishing protected areas usually gloss over water pollution as a threat. Our objective was to determine the longitudinal and seasonal distribution of perfluoroalkyl acids (PFAAs) in water column and sediments from a wastewater dominated stream that enters preservation areas. Water samples were collected along the longitudinal section (six sites, 1000 m away from each other) of the stream during the dry and wet seasons. Sediments were collected from three sites along the stream from three depths. Water and sediments were analyzed for PFAAs using high performance liquid chromatography-tandem mass spectrometry. Eleven PFAAs with 5 to 14 carbon atoms were detected in the water column at all sampling points, with a minor reduction at the last point suggesting a dilution effect. The most detected PFAAs was PFOS, followed by perfluorooctanoic acid (PFOA), and perfluorohexanoic acid (PFHxA). Seasonal differences in PFAAs concentrations suggested contribution of stormwater runoff during the wet season. All analyzed PFAAs in sediments were under the limit of quantification, likely due to the high proportion of sand and low organic matter. However, high concentrations of PFAAs were detected in the water column inside the protected areas, which includes PFOS in concentrations considered not safe for avian wildlife. Water samples appear to be more relevant than sediments to determine PFAAs micro-pollution in water bodies with sandy sediments. Inclusion of a management plans on micro-pollution research, monitoring, and mitigation is recommended for protected areas. PMID:26909512

Biogeochemical snapshot of an urban water system: The Anacostia River, Washington DC

NASA Astrophysics Data System (ADS)

Macavoy, S.; Ewers, E.; Bushaw-Newton, K.

2007-12-01

Highly urbanized and contaminated with PAHs, heavy metals, and sewage, the Anacostia River flows through Maryland and Washington, DC into the tidal Potomac River. Efforts have been underway to assess the river's ecological integrity and to determine the extent of anthropogenic influences. This study examines the nutrients, bacterial biomarkers, organic material, and carbon, nitrogen and sulfur sources in the Anacostia. High biological oxygen demand and low nitrogen (0.33-0.56 mg /L)/phosphorus (0.014 - 0.021 mg/L) concentrations were observed in three areas of the river. Bacterial activity based on carbon source utilization was higher in sediment samples than in water column samples. While bacterial abundances were decreased in downstream areas of sediment; abundances increased in downstream areas in the water column. Downstream sites had higher nutrient concentrations and dissolved organic carbon (up to 13.7 mg/L). Odd-chain length and branched fatty acids (FAs) in the sediments indicated bacterial sources, but long chain FAs indicative of terrestrial primary production were also abundant in some sediments. Also dominant among methyl esters and ketones in some sediment and water column samples was methyl isobutyl ketone, a common industrial solvent and combustion by-product. Sediment carbon stable isotope analyses show a mix of autochthonous and allochthonous derived materials, but most carbon was derived from terrestrial sources (-23.3 to -31.7°). Sediment nitrogen stable isotopes ranged from -5.4 to. 5.6, showing nitrate uptake by plants and also recycling of nitrogen within the river. Sulfur sources were generally between 3 and -5, reflecting local sulfate sources and anaerobic sulfate reduction.

Atrazine remediation in wetland microcosms.

PubMed

Runes, H B; Bottomley, P J; Lerch, R N; Jenkins, J J

2001-05-01

Laboratory wetland microcosms were used to study treatment of atrazine in irrigation runoff by a field-scale-constructed wetland under controlled conditions. Three experiments, in which 1 ppm atrazine was added to the water column of three wetland, one soil control, and one water control microcosm, were conducted. Atrazine dissipation from the water column and degradate formation (deethylatrazine [DEA]; deisopropylatrazine [DIA]; and hydroxyatrazine [HA]) were monitored. Atrazine dissipation from the water column of wetland microcosms was biphasic. Less than 12% of the atrazine applied to wetland microcosms remained in the water column on day 56. Atrazine degradates were observed in water and sediment, with HA the predominant degradate. Analysis of day 56 sediment samples indicated that a significant portion of the initial application was detected as the parent compound and HA. Most probable number (MPN) assays demonstrated that atrazine degrader populations were small in wetland sediment. Wetland microcosms were able to reduce atrazine concentration in the water column via sorption and degradation. Based on results from this study, it is hypothesized that plant uptake contributed to atrazine dissipation from the water column.

Characterizing the distribution of particles in urban stormwater: advancements through improved sampling technology

USGS Publications Warehouse

Selbig, William R.

2014-01-01

A new sample collection system was developed to improve the representation of sediment in stormwater by integrating the entire water column. The depth-integrated sampler arm (DISA) was able to mitigate sediment stratification bias in storm water, thereby improving the characterization of particle size distribution from urban source areas. Collector streets had the lowest median particle diameter of 8 μm, followed by parking lots, arterial streets, feeder streets, and residential and mixed land use (32, 43, 50, 80 and 95 μm, respectively). Results from this study suggest there is no single distribution of particles that can be applied uniformly to runoff in urban environments; however, integrating more of the entire water column during the sample collection can address some of the shortcomings of a fixed-point sampler by reducing variability and bias caused by the stratification of solids in a water column.

Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory; determination of semivolatile organic compounds in bottom sediment by solvent extraction, gel permeation chromatographic fractionation, and capillary-column gas chromatography/mass spectrometry

USGS Publications Warehouse

Furlong, E.T.; Vaught, D.G.; Merten, L.M.; Foreman, W.T.; Gates, Paul M.

1996-01-01

A method for the determination of 79 semivolatile organic compounds (SOCs) and 4 surrogate compounds in soils and bottom sediment is described. The SOCs are extracted from bottom sediment by solvent extraction, followed by partial isolation using high-performance gel permeation chromatography (GPC). The SOCs then are qualitatively identified and quantitative concentrations determined by capillary-column gas chromatography/mass spectrometry (GC/MS). This method also is designed for an optional simultaneous isolation of polychlorinated biphenyls (PCBs) and organochlorine (OC) insecticides, including toxaphene. When OCs and PCBs are determined, an additional alumina- over-silica column chromatography step follows GPC cleanup, and quantitation is by dual capillary- column gas chromatography with electron-capture detection (GC/ECD). Bottom-sediment samples are centrifuged to remove excess water and extracted overnight with dichloromethane. The extract is concentrated, centrifuged, and then filtered through a 0.2-micrometer polytetrafluoro-ethylene syringe filter. Two aliquots of the sample extract then are quantitatively injected onto two polystyrene- divinylbenzene GPC columns connected in series. The SOCs are eluted with dichloromethane, a fraction containing the SOCs is collected, and some coextracted interferences, including elemental sulfur, are separated and discarded. The SOC-containing GPC fraction then is analyzed by GC/MS. When desired, a second aliquot from GPC is further processed for OCs and PCBs by combined alumina-over-silica column chromatography. The two fractions produced in this cleanup then are analyzed by GC/ECD. This report fully describes and is limited to the determination of SOCs by GC/MS.

Occurrence of microbial indicators and Clostridium perfringens in wastewater, water column samples, sediments, drinking water, and Weddell seal feces collected at McMurdo Station, Antarctica

USGS Publications Warehouse

Lisle, J.T.; Smith, J.J.; Edwards, D.D.; McFeters, G.A.

2004-01-01

McMurdo Station, Antarctica, has discharged untreated sewage into McMurdo Sound for decades. Previous studies delineated the impacted area, which included the drinking water intake, by using total coliform and Clostridium perfringens concentrations. The estimation of risk to humans in contact with the impacted and potable waters may be greater than presumed, as these microbial indicators may not be the most appropriate for this environment. To address these concerns, concentrations of these and additional indicators (fecal coliforms, Escherichia coli, enterococci, coliphage, and enteroviruses) in the untreated wastewater, water column, and sediments of the impacted area and drinking water treatment facility and distribution system at McMurdo Station were determined. Fecal samples from Weddell seals in this area were also collected and analyzed for indicators. All drinking water samples were negative for indicators except for a single total coliform-positive sample. Total coliforms were present in water column samples at higher concentrations than other indicators. Fecal coliform and enterococcus concentrations were similar to each other and greater than those of other indicators in sediment samples closer to the discharge site. C. perfringens concentrations were higher in sediments at greater distances from the discharge site. Seal fecal samples contained concentrations of fecal coliforms, E. coli, enterococci, and C. perfringens similar to those found in untreated sewage. All samples were negative for enteroviruses. A wastewater treatment facility at McMurdo Station has started operation, and these data provide a baseline data set for monitoring the recovery of the impacted area. The contribution of seal feces to indicator concentrations in this area should be considered.

Bottom sediment as a source of organic contaminants in Lake Mead, Nevada, USA

USGS Publications Warehouse

Alvarez, David A.; Rosen, Michael R.; Perkins, Stephanie D.; Cranor, Walter L.; Schroeder, Vickie L.; Jones-Lepp, Tammy L.

2012-01-01

Treated wastewater effluent from Las Vegas, Nevada and surrounding communities' flow through Las Vegas Wash (LVW) into the Lake Mead National Recreational Area at Las Vegas Bay (LVB). Lake sediment is a likely sink for many hydrophobic synthetic organic compounds (SOCs); however, partitioning between the sediment and the overlying water could result in the sediment acting as a secondary contaminant source. Locating the chemical plumes may be important to understanding possible chemical stressors to aquatic organisms. Passive sampling devices (SPMDs and POCIS) were suspended in LVB at depths of 3.0, 4.7, and 6.7 (lake bottom) meters in June of 2008 to determine the vertical distribution of SOCs in the water column. A custom sediment probe was used to also bury the samplers in the sediment at depths of 0–10, 10–20, and 20–30 cm. The greatest number of detections in samplers buried in the sediment was at the 0–10 cm depth. Concentrations of many hydrophobic SOCs were twice as high at the sediment–water interface than in the mid and upper water column. Many SOCs related to wastewater effluents, including fragrances, insect repellants, sun block agents, and phosphate flame retardants, were found at highest concentrations in the middle and upper water column. There was evidence to suggest that the water infiltrated into the sediment had a different chemical composition than the rest of the water column and could be a potential risk exposure to bottom-dwelling aquatic organisms.

Fate of polychlorinated biphenyls in a contaminated lake ecosystem: combining equilibrium passive sampling of sediment and water with total concentration measurements of biota.

PubMed

Mäenpää, Kimmo; Leppänen, Matti T; Figueiredo, Kaisa; Mayer, Philipp; Gilbert, Dorothea; Jahnke, Annika; Gil-Allué, Carmen; Akkanen, Jarkko; Nybom, Inna; Herve, Sirpa

2015-11-01

Equilibrium sampling devices can be applied to study and monitor the exposure and fate of hydrophobic organic chemicals on a thermodynamic basis. They can be used to determine freely dissolved concentrations and chemical activity ratios and to predict equilibrium partitioning concentrations of hydrophobic organic chemicals in biota lipids. The authors' aim was to assess the equilibrium status of polychlorinated biphenyls (PCBs) in a contaminated lake ecosystem and along its discharge course using equilibrium sampling devices for measurements in sediment and water and by also analyzing biota. The authors used equilibrium sampling devices (silicone rubber and polyethylene [PE]) to determine freely dissolved concentrations and chemical activities of PCBs in the water column and sediment porewater and calculated for both phases the corresponding equilibrium concentrations and chemical activities in model lipids. Overall, the studied ecosystem appeared to be in disequilibrium for the studied phases: sediment, water, and biota. Chemical activities of PCBs were higher in sediment than in water, which implies that the sediment functioned as a partitioning source of PCBs and that net diffusion occurred from the sediment to the water column. Measured lipid-normalized PCB concentrations in biota were generally below equilibrium lipid concentrations relative to the sediment (CLip ⇌Sed ) or water (CLip ⇌W ), indicating that PCB levels in the organisms were below the maximum partitioning levels. The present study shows the application versatility of equilibrium sampling devices in the field and facilitates a thermodynamic understanding of exposure and fate of PCBs in a contaminated lake and its discharge course. © 2015 SETAC.

Development of a depth-integrated sample arm (DISA) to reduce solids stratification bias in stormwater sampling

USGS Publications Warehouse

Selbig, William R.; ,; Roger T. Bannerman,

2011-01-01

A new depth-integrated sample arm (DISA) was developed to improve the representation of solids in stormwater, both organic and inorganic, by collecting a water quality sample from multiple points in the water column. Data from this study demonstrate the idea of vertical stratification of solids in storm sewer runoff. Concentrations of suspended sediment in runoff were statistically greater using a fixed rather than multipoint collection system. Median suspended sediment concentrations measured at the fixed location (near the pipe invert) were approximately double those collected using the DISA. In general, concentrations and size distributions of suspended sediment decreased with increasing vertical distance from the storm sewer invert. Coarser particles tended to dominate the distribution of solids near the storm sewer invert as discharge increased. In contrast to concentration and particle size, organic material, to some extent, was distributed homogenously throughout the water column, likely the result of its low specific density, which allows for thorough mixing in less turbulent water.

Development of a depth-integrated sample arm to reduce solids stratification bias in stormwater sampling.

PubMed

Selbig, William R; Bannerman, Roger T

2011-04-01

A new depth-integrated sample arm (DISA) was developed to improve the representation of solids in stormwater, both organic and inorganic, by collecting a water quality sample from multiple points in the water column. Data from this study demonstrate the idea of vertical stratification of solids in storm sewer runoff. Concentrations of suspended sediment in runoff were statistically greater using a fixed rather than multipoint collection system. Median suspended sediment concentrations measured at the fixed location (near the pipe invert) were approximately double those collected using the DISA. In general, concentrations and size distributions of suspended sediment decreased with increasing vertical distance from the storm sewer invert. Coarser particles tended to dominate the distribution of solids near the storm sewer invert as discharge increased. In contrast to concentration and particle size, organic material, to some extent, was distributed homogenously throughout the water column, likely the result of its low specific density, which allows for thorough mixing in less turbulent water.

Development of a depth-integrated sample arm to reduce solids stratification bias in stormwater sampling

USGS Publications Warehouse

Selbig, W.R.; Bannerman, R.T.

2011-01-01

A new depth-integrated sample arm (DISA) was developed to improve the representation of solids in stormwater, both organic and inorganic, by collecting a water quality sample from multiple points in the water column. Data from this study demonstrate the idea of vertical stratification of solids in storm sewer runoff. Concentrations of suspended sediment in runoff were statistically greater using a fixed rather than multipoint collection system. Median suspended sediment concentrations measured at the fixed location (near the pipe invert) were approximately double those collected using the DISA. In general, concentrations and size distributions of suspended sediment decreased with increasing vertical distance from the storm sewer invert. Coarser particles tended to dominate the distribution of solids near the storm sewer invert as discharge increased. In contrast to concentration and particle size, organic material, to some extent, was distributed homogenously throughout the water column, likely the result of its low specific density, which allows for thorough mixing in less turbulent water. ?? 2010 Publishing Technology.

Reduction of hydraulic conductivity in column simulations of unconsolidated sediments by growth of in situ microflora

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bertetti, F.P.; Birnbaum, S.J.

1992-01-01

Laboratory experiments were employed to determine the effects of microbial growth upon the hydraulic conductivity (K) of unconsolidated sediments at Kelly Air Force Base, Texas. Indigenous microflora were isolated from sediment samples collected at sites contaminated with toxic organic compounds (e.g. dichlorobenzene) by plating on concentrated and dilute media. Plexiglas columns were packed with silica beads or Kelly AFB sediment and used to simulate ground water flow conditions. Grain sizes were selected to yield realistic K values (2.0 [times] 10[sup [minus]1] to 8.0 [times] 10[sup [minus]3] cm/sec) defined by field data from the contaminated sites. Both individual and mixed microbialmore » colonies, selected based on morphological characteristics individual and mixed microbial colonies, selected based on morphological characteristics deemed favorable for porosity obstruction, were injected into sterile, saturated columns. Growth was stimulated by adding sterile liquid nutrient media. Media flow rates were based upon field derived hydraulic conductivity values and water table gradients. Flow rates were controlled using a peristaltic pump. Growth of the microorganisms produced biomass which reduced the column hydraulic conductivity by up to 90% in 11 days. Reduction in K was accomplished via clogging of pore throats by cell attachment and accumulation on bead surfaces, and extracellular biofilm development. Sediment packed columns showed reduction in K values similar to that of bead packed columns of equivalent grain size. Porosity obstruction and corresponding reduction in K persisted in the columns even when subjected to hydraulic gradients significantly exceeding gradients measured in the field thereby demonstrating the robust nature of biological barrier to flow.« less

Distribution of genetic markers of fecal pollution on a freshwater sandy shoreline in proximity to wastewater effluent

PubMed Central

Eichmiller, Jessica J.; Hicks, Randall E.; Sadowsky, Michael J.

2013-01-01

Water, sand, and sediment from a Lake Superior harbor site continuously receiving wastewater effluent was sampled monthly for June to October 2010 and from May to September 2011. Understanding the dynamics of genetic markers of fecal bacteria in these matrices is essential to accurately characterizing health risks. Genetic markers for enterococci, total Bacteroides, and human-associated Bacteroides were measured in site-water, sand, and sediment and in final effluent by quantitative PCR. The similarity between the quantity of molecular markers in the water column and effluent indicated that the abundance of genetic markers in the water column was likely controlled by effluent inputs. Effluent turbidity was positively correlated (p ≤ 0.05) with AllBac and HF183 in final effluent and AllBac in the water column. In sand and sediment, Entero1 and AllBac were most abundant in the upper 1– 3 cm depths, whereas HF183 was most abundant in the upper 1 cm of sand and at 7 cm in sediment. The AllBac and Entero1 markers were 1- and 2-orders of magnitude more abundant in sand and sediment relative to the water column per unit mass. These results indicate that sand and sediment may act as reservoirs for genetic markers of fecal pollution at some freshwater sites. PMID:23473470

Evaluation of phase II toxicity identification evaluation methods for freshwater whole sediment and interstitial water.

PubMed

Phillips, Bryn M; Anderson, Brian S; Hunt, John W; Clark, Sara L; Voorhees, Jennifer P; Tjeerdema, Ron S; Casteline, Jane; Stewart, Margaret

2009-02-01

Phase I whole sediment toxicity identification evaluation (TIE) methods have been developed to characterize the cause of toxicity as organic chemicals, metals, or ammonia. In Phase II identification treatments, resins added to whole sediment to reduce toxicity caused by metals and organics can be separated and eluted much like solid-phase extraction (SPE) columns are eluted for interstitial water. In this study, formulated reference sediments spiked with toxic concentrations of copper, fluoranthene, and nonylphenol were subjected to whole sediment and interstitial water TIE treatments to evaluate Phase I and II TIE procedures for identifying the cause of toxicity to Hyalella azteca. Phase I TIE treatments consisted of adding adsorbent resins to whole sediment, and using SPE columns to remove spiked chemicals from interstitial water. Phase II treatments consisted of eluting resins and SPE columns and the preparation and testing of eluates for toxicity and chemistry. Whole sediment resins and SPE columns significantly reduced toxicity, and the eluates from all treatments contained toxic concentrations of the spiked chemical except for interstitial water fluoranthene. Toxic unit analysis based on median lethal concentrations (LC50s) allowed for the comparison of chemical concentrations among treatments, and demonstrated that the bioavailability of some chemicals was reduced in some samples and treatments. The concentration of fluoranthene in the resin eluate closely approximated the original interstitial water concentration, but the resin eluate concentrations of copper and nonylphenol were much higher than the original interstitial water concentrations. Phase II whole sediment TIE treatments provided complementary lines of evidence to the interstitial water TIE results.

Nutrient variability and its influence on nitrogen processes in a highly turbid tropical estuary (Bangpakong, Gulf of Thailand).

PubMed

Bordalo, Adriano A; Chalermwat, Kashane; Teixeira, Catarina

2016-07-01

Estuarine ecosystems in SE Asia have been poorly studied when compared to other tropical environments. Important gaps exist particularly in the understanding of their biogeochemical function and contribution to global change. In this work we looked into N-turnover in the water column and sediments of the Bangpakong estuary (13°N). A seasonal sampling program was performed along the salinity gradient covering different stretches of the estuary (68km). Key physical and chemical characteristics were also monitored in order to unravel possible environmental controls. Results showed the occurrence of active denitrification in sediments (5.7-50.9nmol N-N2/(cm(3)·hr)), and water column (3.5-1044pmol N-N2/(cm(3)·hr)). No seasonal or spatial variability was detected for denitrification potential in sediment samples. However, in the water column, the denitrification activity peaked during the transition season in the downstream sites coinciding with high turbidity levels. Therefore, in that period of the year, the water column compartment may be an important contributor to nitrate reduction within the estuary. The rather low nitrification rates detected were not always measurable, probably due to the reduced oxygen content and high siltation. This study is one of the few dealing simultaneously with sediments and water column processes in a highly turbid tropical estuary. Therefore, it emerges as a valuable contribution for the understanding of the dynamics of the nitrogen cycle in tropical environments by exploring the role of estuarine N microbial activity in reducing the effects of increased nitrogen loads. Copyright © 2016. Published by Elsevier B.V.

Comparison of Passive Sampling Devices for Measuring Dissolved PCBs in the Water Column of a Marine Superfund Site

EPA Science Inventory

The presence of contaminated sediments in aquatic environments results in several potential sources of ecological risk. These risks include the release of contaminants into the water column causing exposure to pelagic organisms. Possible adverse biological effects of this exposu...

Application of passive sampling for measuring dissolved concentrations of organic contaminants in the water column at three marine superfund sites

EPA Science Inventory

At contaminated sediment sites, including U.S. EPA Superfund sites, it is critical to measure water column concentrations of freely dissolved contaminants to understand the complete exposure of aquatic organisms to hydrophobic organic contaminants (HOCs). However, historically a...

Microbial community composition and function in the Tonga Trench: from 400m below the sea surface to 9100m water depth and from 0 to 2 m below the seafloor.

NASA Astrophysics Data System (ADS)

Leon Zayas, R. I.; Bartlett, D.; Biddle, J.

2016-12-01

Exploration of the deep ocean has expanded our understanding of oceanic ecosystems including continental margins and mid-ocean ridges, but little is known about the deepest sites on Earth, oceanic trenches. In this study, sediment and water samples were collected from the Tonga Trench at 9100m below sea level. These include four water column samples at depths of 400m, 3000m, 5000m and 9100m, and sediment samples at 0, 1, and 2 meter below the seafloor (mbsf). DNA was extracted and sequencing was performed for the recovery of metagenomic data for all samples. The analysis of the sediment samples from Tonga Trench has provided a new perspective of life in the deep ocean. The data for microbial community composition and metabolic profiles at the surface sediments, 0 mbsf, suggest that the microbes are present and taxonomically similar to the water column microbes, and perform an array of aerobic as well as anaerobic metabolisms, including degradation of organic carbon, oxidative phosphorylation, fermentation, nitrate reduction and sulfur oxidation among others. On the other hand, at 1 and 2 mbsf, the microbial community has diminished richness and diversity when compared to 0 mbsf and is potentially environmentally degraded due to the lack of quality data recoverable. Tonga Trench water column metagenomes are compared to other deep and hadal environments to better understand how different geographical locations, water masses and depth affect microbial community composition, distribution and metabolic potential. To our knowledge, this is the deepest metagenome analyzed to date (9100m), presenting an unprecedented look at one of the deepest environments on our planet.

Initial Results on the Extraterrestrial Component of New Sediment Cores Containing Deposits of the Eltanin Impact Event

NASA Technical Reports Server (NTRS)

Kyte, Frank T.; Gersonde, Rainer

2003-01-01

Background The impact of the Eltanin asteroid into the Bellingshausen Sea (2.15 Ma) is the only known impact in a deep-ocean (approx. 5 km) basin. In 1995, Polarstern expedition ANT XII/4 made the first geological survey of the suspected impact region. Three sediment cores sampled around the San Martin seamounts (approx. 57.5 S, 91 W) contained well-preserved impact deposits. Sediments of Eocene age and younger were ripped up and redeposited by the impact. The depositional sequence produced by the impact has three units: a chaotic assemblage of sediment fragments up to 50 cm, followed by laminated sands deposited as a turbulent flow, and finally silts and clays that accumulated from dispersed sediments in the water column. The meteoritic impact ejecta, which is composed of shock-melted asteroidal materials and unmelted meteorites, settled through the water column and concentrated near the top of the laminated sands.

Data on sediment quality and concentrations of polychlorinated biphenyls from the Lower Neponset River, Massachusetts, 2002-03

USGS Publications Warehouse

Breault, Robert F.; Cooke, Matthew G.; Merrill, Michael

2004-01-01

The U.S. Geological Survey, in cooperation with the Massachusetts Executive Office of Environmental Affairs Department of Fish and Game Riverways Program, and the U.S. Environmental Protection Agency, studied sediment and water quality in the lower Neponset River, which is a tributary to Boston Harbor. Grab and core samples of sediment were tested for elements and organic compounds including polyaromatic hydrocarbons, organochlorine pesticides, and polychlorinated biphenyls. Physical properties of sediment samples, including grain size, were also measured. Selected sediment-core samples were tested for reactive sulfides and metals by means of the toxicity characteristic leaching procedure, which are sediment-disposal-related tests. Water quality, with respect to polychlorinated biphenyl contamination, was determined by testing samples collected by PISCES passive-water-column samplers for polychlorinated biphenyl congeners. Total concentrations of polychlorinated biphenyls were calculated by congener and by Aroclor.

Application of Passive Sampling for Measuring Dissolved Concentrations of Organic Contaminants in the Water Column at Three U.S. EPA Marine Superfund Sites

EPA Science Inventory

At contaminated sediment sites, including U.S. EPA Superfund sites, it is critical to measure water column concentrations of freely dissolved contaminants to understand the complete exposure of aquatic organisms to hydrophobic organic contaminants (HOCs). Historically acquiring ...

Application of Passive Sampling for Measuring Dissolved Concentrations of Organic Contaminants in the Water Column at Three U.S. EPA Marine Superfund Sites.

EPA Science Inventory

At contaminated sediment sites, including U.S. EPA Superfund sites, it is critical to measure water column concentrations of freely dissolved contaminants to understand the complete exposure of aquatic organisms to hydrophobic organic contaminants (HOCs). Historically, acquiring...

Characterization and Modeling of Settling, Consolidation, and Suspension to Optimize Sediment Retention of Sediment Diversions for Coastal Restoration

NASA Astrophysics Data System (ADS)

Sha, X.; Xu, K.; Bentley, S. J.; Robichaux, P.

2016-02-01

Although many studies of sediment diversions have been conducted on the Mississippi Delta, relatively less attention has been paid to understanding sediment retention and basic cohesive sedimentation processes in receiving basins. Our research evaluates long-term (up to six months) sedimentation processes through various laboratory experiments, especially cohesive sediment settling, consolidation and resuspension and their impacts on sediment retention. Bulk sediment samples were collected from West Bay, near Head of Passes of the Mississippi Delta, and the Big Mar basin that receive water and sediment from the Caernarvon Diversion in the upper Breton Sound region of Louisiana, USA. A-230-cm tall settling column with nine sampling ports at 15 cm intervals was used to measure the consolidation for four initial sediment concentrations (10-120 kg m-3) with two salinities (1 ppt & 5 ppt). Samples of sediment slurry were taken from every port at different time intervals up to 15 days or longer (higher concentration needs longer time to consolidate) to record concentrations gravimetrically. A 200 cm long tube was connected to a 50 cm long core chamber to accumulate at least a 10 cm thick sediment column for erosion tests. A dual-core Gust Erosion Microcosm System was employed to measure time-series (0.5, 1, 2, 3, 4, 5, 6 months) erodibility at seven shear stress regimes (0.01-0.60 Pa). Our preliminary results show a significant decrease of erodibility with time and high concentration (120g/L). Salinity impacted on sediment behavior in consolidation experiments. Our study reveals that more enclosed receiving basins, intermittent openings of diversions, or reduced shear stress due to man-made structure all can potentially reduce cohesive sediment erosion in coastal Louisiana. Further results will be analyzed to determine the model constants. Consolidating rates and corresponding erosional changes will be determined to optimize sediment retention in coastal protection.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bratkič, Arne, E-mail: arne.bratkic@ijs.si; Ogrinc, Nives, E-mail: nives.orginc@ijs.si; Kotnik, Jože, E-mail: joze.kotnik@ijs.si

In this study, seasonal changes of mercury (Hg) species in the highly variable estuary of Soča/Isonzo River (northern Adriatic Sea) were investigated. Samplings were performed on a seasonal basis (September 2009, May, August and October 2010) and Hg species (total Hg, methylmercury (MeHg), dissolved gaseous Hg (DGM)) in waters, sediments and pore waters were determined. In addition, a range of ancillary parameters were measured (salinity, nutrients, organic carbon (OC), nitrogen species). Hg values were interpreted using these parameters and hydrological conditions (river flow, wave height) around the time of sampling. There were no significant changes in Hg load from rivermore » to the gulf, compared to previous studies. The load was temporarily higher in May 2010 due to higher river flow. Wave height, through changing hydrostatic pressure, was most likely to cause resuspension of already deposited Hg from the bottom (August 2010). The estuary is a net source of DGM to the atmosphere as suggested by DGM profiles, with salinity, redox potential and organic matter as the most probable controls over its production. MeHg is produced in situ in sediment or in water column, rather than transported by river, as indicated by its correlation with OC of the marine origin. Calculated fluxes for THg and MeHg showed sediment as a source for both the water column. In pore waters, OC in part affects partitioning of both THg and MeHg; however other factors (e.g. sulphide and/or oxyhydroxides precipitation and dissolution) are also probably important. -- Highlights: ► Water, sediment and pore water mercury species in front of Soča River estuary were measured. ► Seasonally variable hydrological conditions were shown to influence water column Hg speciation. ► Fluxes for total Hg and MeHg from sediment to water were calculated. ► Sediment is a source of total Hg and MeHg to the water column. ► Correlation of MeHg with organic carbon of marine origin suggests in situ formation.« less

Semipermeable membrane devices used to estimate bioconcentration of polychlorinated biphenyls

USGS Publications Warehouse

Chambers, D.B.

1999-01-01

Aquatic organisms passively accumulate hydrophobic organic compounds, such as polychlorinated biphenyls, even when ambient water concentrations of the contaminant are below analytical detection limits. However, contaminant concentrations in tissue samples are subject to an inherently high level of variability due to differences in species, life stage, and gender bioconcentration potentials. Semipermeable membrane devices (SPMDs) were used to sample Aroclor 1254, a mixture of readily bioconcentrated polychlorinated biphenyls (PCBs), in a contaminated wetland near Flat Top, WV. The devices consisted of triolein, a lipid found in fish, enclosed in a polyethylene membrane. SPMDs were deployed in the water column and in direct contact with wetland sediments along a previously identified concentration gradient of PCBs. The devices were retrieved after a 25-day exposure period. Analytes were recovered by dialyzing the devices in nanograde hexane. Hexane dialysates were condensed and analyzed by gas chromatography. All deployed devices sequestered quantifiable amounts of Aroclor 1254. Water-column SPMDs accumulated PCBs far in excess of ambient water concentrations. The devices contacting sediments accumulated PCBs at all sites, though accumulated concentrations did not exceed concentrations in sediment. Patterns of PCB concentration in the devices corresponded to the identified gradient at the site. Results from the water-column SPMDs were used to estimate the concentration of the dissolved, bioavailable fraction of PCBs present in the water column. These concentrations ranged from 0.01 to 0.09 ??g/L of bioavailable Aroclor 1254.

Heat storage in the Hettangian aquifer in Berlin - results from a column experiment

NASA Astrophysics Data System (ADS)

Milkus, Chri(Sch)augott

2015-04-01

Aquifer Thermal Energy Storage (ATES) is a sustainable alternative for storage and seasonal availability of thermal energy. However, its impact on the subsurface flow regime is not well known. In Berlin (Germany), the Jurassic (Hettangian) sandstone aquifer with highly mineralized groundwater (TDS 27 g/L) is currently used for heat storage. The aim of this study was to examine the hydrogeochemical changes that are caused by the induced temperature shift and its effects on the hydraulic permeability of the aquifer. Column experiments were conducted, in which stainless steel columns were filled with sediment from the aquifer and flushed with native groundwater for several weeks. The initial temperature of the experiment was 20°C, comparable to the in-situ conditions within the aquifer. After reaching equilibrium between sediment and water, the temperature was increased to simulate heating of the aquifer. During the experiment, physical and chemical parameters (pH, ORP, dissolved oxygen and dissolved carbon dioxide) were measured at the outflow of the column and the effluent water was sampled. Using a Scanning Electron Microscope, the deposition of precipitated minerals and biofilm on sediment grains was analyzed. Changes in hydraulic properties of the sediment were studied by the use of tracer tests with Uranin.

Patterns in bacterial and archaeal community structure and diversity in western Beaufort Sea sediments and waters

NASA Astrophysics Data System (ADS)

Hamdan, L. J.; Sikaroodi, M.; Coffin, R. B.; Gillevet, P. M.

2010-12-01

A culture-independent phylogenetic study of microbial communities in water samples and sediment cores recovered from the Beaufort Sea slope east of Point Barrow, Alaska was conducted. The goal of the work was to describe community composition in sediment and water samples and determine the influence of local environmental conditions on microbial populations. Archaeal and bacterial community composition was studied using length heterogeneity-polymerase chain reaction (LH-PCR) and multitag pyrosequencing (MTPS). Sediment samples were obtained from three piston cores on the slope (~1000m depth) arrayed along an east-west transect and one core from a depth of approximately 2000m. Discrete water samples were obtained using a CTD-rosette from three locations adjacent to piston core sites. Water sample were selected at three discrete depths within a vertically stratified (density) water column. The microbial community in near surface waters was distinct from the community observed in deeper stratified layers of the water column. Multidimensional scaling analysis (MDS) revealed that water samples from mid and deep stratified layers bore high similarity to communities in cores collected in close proximity. Overall, the highest diversity (bacteria and archaea) was observed in a core which had elevated methane concentration relative to other locations. Geochemical (e.g., bulk organic and inorganic carbon pools, nutrients, metabolites) and physical data (e.g. depth, water content) were used to reveal the abiotic factors structuring microbial communities. The analysis indicates that sediment water content (porosity) and inorganic carbon concentration are the most significant structuring elements on Beaufort shelf sedimentary microbial communities.

Laboratory, Field, and Analytical Procedures for Using Passive Sampling in the Evaluation of Contaminated Sediments: User's Manual

EPA Science Inventory

Regardless of the remedial technology invoked to address contaminated sediments in the environment, there is a critical need to have tools for assessing the effectiveness of the remedy. In the past, these tools have included chemical and biomonitoring of the water column and sedi...

Carbon isotope dynamics in the water column and surface sediments of marginal seas

NASA Astrophysics Data System (ADS)

Lipka, Marko; Liu, Bo; Schmiedinger, Iris; Böttcher, Michael E.

2017-04-01

The microbial mineralization of organic matter in marine sediments leads to the accumulation of dissolved inorganic carbon (DIC) and other metabolites into the interstitial waters. Pore water profiles sensitively reflect the zones of dominant biogeochemical processes, net trans-formation rates, and diffusive and advective transport of dissolved species across the sediment-water interface. They are controlled by different factors like sedimentology, bottom water currents and redox conditions, microbial activity, and the availability of electron acceptors/donors. The biogeochemical processes create steep gradients in DIC and its carbon isotope composition. One boundary condition for transport processes in the sediment is defined by the composition of the water column, which is under impact by physical mixing processes (e.g., salinity gradient; sediment-water exchange), biological activity and carbon dioxide exchange at the water-atmosphere interface. We present here the results of detailed biogeochemical investigations of vertical water column and pore water profiles from two brackish marginal seas: the Baltic Sea and the Black Sea. The water column on a transect between the North Sea and the southern Baltic Sea as well within the Black Sea were investigated on three cruises with RV MS Merian (MSM33, MSM50, MSM51). In addition, biogeochemical processes and associated element fluxes across the sediment-water interface were studied in key regions of Baltic Sea and Black Sea using pore water and sediment samples retrieved from sediment cores that were collected with a multi-coring device. Water samples were analyzed for metals, nutrients, and metabolites concentrations as well as stable carbon isotope composition of DIC to allow a modeling of steady-state transformation, volumetric transformation rates and element fluxes. The isotope composition of the dissolved inorganic carbon system shows a gradient between the North and the Baltic Sea, following the salinity during winter time. Element fluxes across the sediment-water interface depend on bottom water redox conditions, sedimentology and organic contents. Advective fluxes induced by sedimentation events, macro zoobenthos and wave action can affect the top sections of the sediment, thereby modifying shallow concentration gradients. By means of non-steady state modelling of pore water profiles we were able to identify the impact of mixing processes and sedimentation events in the oxic part of the Baltic Sea. In the Black Sea, on the other hand, anaerobic processes control the dynamics in DI13C under permanent euxinic conditions. A Keeling plot analysis was performed on pore waters to identify the δ13C of DIC released upon oxidation of DOC or methane. The carbon isotope composition of DIC is found to be a highly sensitive tool for understanding carbon cycling in the water column and sediments. Acknowledgements: The study is supported by BMBF during FONA-SECOS project, DFG (cruises MSM33, MSM50 and MSM51) and Leibniz IOW.

Diatoms as a paleoproductivity proxy in the NW Iberian coastal upwelling system (NE Atlantic)

NASA Astrophysics Data System (ADS)

Zúñiga, Diana; Santos, Celia; Froján, María; Salgueiro, Emilia; Rufino, Marta M.; De la Granda, Francisco; Figueiras, Francisco G.; Castro, Carmen G.; Abrantes, Fátima

2017-03-01

The objective of the current work is to improve our understanding of how water column diatom's abundance and assemblage composition is seasonally transferred from the photic zone to seafloor sediments. To address this, we used a dataset derived from water column, sediment trap and surface sediment samples recovered in the NW Iberian coastal upwelling system. Diatom fluxes (2.2 (±5.6) 106 valves m-2 d-1) represented the majority of the siliceous microorganisms sinking out from the photic zone during all studied years and showed seasonal variability. Contrasting results between water column and sediment trap diatom abundances were found during downwelling periods, as shown by the unexpectedly high diatom export signals when diatom-derived primary production achieved their minimum levels. They were principally related to surface sediment remobilization and intense Minho and Douro river discharge that constitute an additional source of particulate matter to the inner continental shelf. In fact, contributions of allochthonous particles to the sinking material were confirmed by the significant increase of both benthic and freshwater diatoms in the sediment trap assemblage. In contrast, we found that most of the living diatom species blooming during highly productive upwelling periods were dissolved during sinking, and only those resistant to dissolution and the Chaetoceros and Leptocylindrus spp. resting spores were susceptible to being exported and buried. Furthermore, Chaetoceros spp. dominate during spring-early summer, when persistent northerly winds lead to the upwelling of nutrient-rich waters on the shelf, while Leptocylindrus spp. appear associated with late-summer upwelling relaxation, characterized by water column stratification and nutrient depletion. These findings evidence that the contributions of these diatom genera to the sediment's total marine diatom assemblage should allow for the reconstruction of different past upwelling regimes.

Recent Advances in Understanding the Sources of Methylmercury to Coastal Waters

NASA Astrophysics Data System (ADS)

Mason, R. P.; Balcom, P.; Chen, C.; Gosnell, K. J.; Jonsson, S.; Mazrui, N.; Ortiz, V.; Seelen, E.; Schartup, A. T.; Sunderland, E. M.

2015-12-01

Understanding the sources of methylmercury (MeHg) to the food chain in coastal waters is important given the related health concerns from consumption of seafood containing elevated MeHg. While water column dissolved or particulate MeHg is the best predictor of bioaccumulation into pelagic organisms in coastal waters, there is debate concerning the dominant sources of MeHg to the water column, and how the relative importance of these sources vary with ecosystem characteristics. Potential sources include both external inputs from the watershed and offshore waters and internal sources (net methylation in sediments and the associated flux of MeHg to the water column and/or net MeHg production in the water column). We will report the results from our various studies in estuarine and coastal waters which have examined the distribution and partitioning of sediment and water column MeHg, and its formation and degradation, across a geographic range from Labrador, Canada to the Chesapeake Bay, USA. The ecosystems studied vary from shallow estuarine bays to deeper systems, and from salt wedge to tidally-dynamic systems. Additionally, both pristine and contaminated environments were examined. The studies examined the factors controlling the net production of MeHg in sediments, and in our more recent work, the potential formation of MeHg in the oxic water column of coastal waters. Sediment measurements (core and grab samples) included both solid phase and porewater MeHg and total mercury (HgT) and important ancillary parameters. Water column parameters included dissolved and particulate MeHg and HgT, TSS, nutrients, and DOC. Stable Hg isotope tracer incubations were used to assess the degree of methylation and demethylation in sediments and surface waters. Average suspended particle MeHg ranged from <5 to 120 pmol/g, and was 1-8% of HgT across sites. Mass balance estimates provide insights into the importance of external MeHg sources to coastal waters. We will use the information to evaluate the following questions: 1) what conditions favor external sources of MeHg over internal production? 2) what conditions enhance net in situ water column formation of MeHg? and 3) what conditions enhance the exchange of MeHg at the sediment/water interface in coastal waters?

Carotenoid diagenesis in a marine sediment

NASA Technical Reports Server (NTRS)

Watts, C. D.; Maxwell, J. R.

1977-01-01

The major carotenoids at three levels (3, 40, and 175 m below the sediment-water interface) in a core from a marine sediment (Cariaco Trench, off Venezuela) have been examined. Mass and electronic spectral data have provided evidence for the onset of a progressive reduction of carotenoids in the geological column. The time scale of the process appears to depend on the particular carotenoid. Reduction of up to two double bonds is observed for the diol, zeaxanthin, in the oldest sediment (about 340,000 years old) but no reduction is observed in the younger samples (about 5000 and 56,000 years old). The diketone, canthaxanthin, shows evidence of reduction of up to two double bonds in the 56,000-yr sample and up to five double bonds in the oldest sample. No reduction of beta-carotene was observed in any of the samples.

Extraction and analysis methods for the determination of pyrethroid insecticides in surface water, sediments and biological tissues at environmentally relevant concentrations.

PubMed

Mekebri, A; Crane, D B; Blondina, G J; Oros, D R; Rocca, J L

2008-05-01

The aim of this study was to develop and validate chemical methods for measuring pyrethroid insecticides at environmentally relevant concentrations in different matrices. The analytes included six synthetic pyrethroids with the highest agricultural and commercial structural uses in California: bifenthrin, cyfluthrin, cypermethrin, esfenvalerate/fenvalerate, lambda-cyhalothrin, permethrin, and their corresponding stereoisomers, which includes enantiomers, diastereomers and racemic mixtures. Fortified water samples were extracted for analysis of synthetic pyrethroids using liquid-liquid extraction, while fortified sediment and fish tissue samples were extracted using pressurized fluid extraction followed by gel permeation chromatography (GPC) to remove matrix interferences. A florisil column was used for additional cleanup and fractionation of sediment and tissue extracts. Extracts were analyzed using dual column high resolution gas chromatography with electron capture detection (GC/ECD) and confirmation was obtained with gas chromatography mass spectrometry using a quadrupole ion trap detector in MS-MS mode. Method detection limits (MDLs) have been established for water (1-3 ng/L), sediment (0.5-4 ng/g dry weight) and tissue (1-3 ng/g fresh weight). Mean percent recoveries of fortified blanks and samples ranged from 75 to 115% with relative standard deviation (RSD) values less than 20% for all target compounds.

Analytical Data Report for Sediment Samples Collected From 116-KE-3 and UPR-100-K-1; Boreholes C8796 and C8796

DOE Office of Scientific and Technical Information (OSTI.GOV)

Snyder, Michelle M.V.; Last, George V.; Stephenson, John R.

2016-03-01

CH2M Hill Plateau Remediation Company (CHPRC) requested the services of the Pacific Northwest National Laboratory (PNNL) to perform contaminant leach testing on samples from two boreholes, C8796 and C8797, installed near the 105-KE reactor. These tests consisted of field texture column tests, <2 mm repacked column tests, batch desorption tests, and ion exchange experiments. In addition, hydraulic and physical property characterization was performed.

Remediation of groundwater contaminated with arsenic through enhanced natural attenuation: Batch and column studies.

PubMed

Hafeznezami, Saeedreza; Zimmer-Faust, Amity G; Jun, Dukwoo; Rugh, Megyn B; Haro, Heather L; Park, Austin; Suh, Jae; Najm, Tina; Reynolds, Matthew D; Davis, James A; Parhizkar, Tarannom; Jay, Jennifer A

2017-10-01

Batch and column laboratory experiments were conducted on natural sediment and groundwater samples from a contaminated site in Maine, USA with the aim of lowering the dissolved arsenate [As(V)] concentrations through chemical enhancement of natural attenuation capacity. In batch factorial experiments, two levels of treatment for three parameters (pH, Ca, and Fe) were studied at different levels of phosphate to evaluate their impact on As(V) solubility. Results illustrated that lowering pH, adding Ca, and adding Fe significantly increased the sorption capacity of sediments. Overall, Fe amendment had the highest individual impact on As(V) levels. To provide further evidence for the positive impact of Ca on As(V) adsorption, isotherm experiments were conducted at three different levels of Ca concentrations. A consistent increase in adsorption capacity (26-37%) of sediments was observed with the addition of Ca. The observed favorable effect of Ca on As(V) adsorption is likely caused by an increase in the surface positive charges due to surface accumulation of Ca 2+ ions. Column experiments were conducted by flowing contaminated groundwater with elevated pH, As(V), and phosphate through both uncontaminated and contaminated sediments. Potential in-situ remediation scenarios were simulated by adding a chemical amendment feed to the columns injecting Fe(II) or Ca as well as simultaneous pH adjustment. Results showed a temporary and limited decrease in As(V) concentrations under the Ca treatment (39-41%) and higher levels of attenuation in Fe(II) treated columns (50-91%) but only after a certain number of pore volumes (18-20). This study illustrates the importance of considering geochemical parameters including pH, redox potential, presence of competing ions, and sediment chemical and physical characteristics when considering enhancing the natural attenuation capacity of sediments to mitigate As contamination in natural systems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Lake Mixing Regime Influences Arsenic Transfer from Sediments into the Water Column and Uptake in Plankton

NASA Astrophysics Data System (ADS)

Gawel, J.; Barrett, P. M.; Hull, E.; Burkart, K.; McLean, J.; Hargrave, O.; Neumann, R.

2017-12-01

The former ASARCO copper smelter in Ruston, WA, now a Superfund site, contaminated a large area of the south-central Puget Sound region with arsenic over its almost 100-year history. Arsenic, a priority Superfund contaminant and carcinogen, is a legacy pollutant impacting aquatic ecosystems in urban lakes downwind of the ASARCO emissions stack. We investigated the impact of lake mixing regime on arsenic transfer from sediments into lake water and aquatic biota. We regularly collected water column and plankton samples from four study lakes for two years, and deployed sediment porewater peepers and sediment traps to estimate arsenic flux rates to and from the sediments. In lakes with strong seasonal stratification, high aqueous arsenic concentrations were limited to anoxic hypolimnetic waters while low arsenic concentrations were observed in oxic surface waters. However, in polymictic, shallow lakes, we observed elevated arsenic concentrations throughout the entire oxic water column. Sediment flux estimates support higher rates of arsenic release from sediments and vertical transport. Because high arsenic in oxic waters results in spatial overlap between arsenate, a phosphate analog, and lake biota, we observed enhanced trophic transfer of arsenic in polymictic, shallow study lakes, with higher arsenic accumulation (up to an order of magnitude) in both phytoplankton and zooplankton compared to stratified lakes. Chemical and physical mechanisms for higher steady-state arsenic concentrations will be explored. Our work demonstrates that physical mixing processes coupled with sediment/water redox status exert significant control over bioaccumulation, making shallow, periodically-mixed urban lakes uniquely vulnerable to environmental and human health risks from legacy arsenic contamination.

Effects of salt pond restoration on benthic flux: Sediment as a source of nutrients to the water column

USGS Publications Warehouse

Topping, Brent R.; Kuwabara, James S.; Carter, James L.; Garrettt, Krista K.; Mruz, Eric; Piotter, Sarah; Takekawa, John Y.

2016-01-01

Understanding nutrient flux between the benthos and the overlying water (benthic flux) is critical to restoration of water quality and biological resources because it can represent a major source of nutrients to the water column. Extensive water management commenced in the San Francisco Bay, Beginning around 1850, San Francisco Bay wetlands were converted to salt ponds and mined extensively for more than a century. Long-term (decadal) salt pond restoration efforts began in 2003. A patented device for sampling porewater at varying depths, to calculate the gradient, was employed between 2010 and 2012. Within the former ponds, the benthic flux of soluble reactive phosphorus and that of dissolved ammonia were consistently positive (i.e., moving out of the sediment into the water column). The lack of measurable nitrate or nitrite concentration gradients across the sediment-water interface suggested negligible fluxes for dissolved nitrate and nitrite. The dominance of ammonia in the porewater indicated anoxic sediment conditions, even at only 1 cm depth, which is consistent with the observed, elevated sediment oxygen demand. Nearby openestuary sediments showed much lower benthic flux values for nutrients than the salt ponds under resortation. Allochthonous solute transport provides a nutrient advective flux for comparison to benthic flux. For ammonia, averaged for all sites and dates, benthic flux was about 80,000 kg/year, well above the advective flux range of −50 to 1500 kg/year, with much of the variability depending on the tidal cycle. By contrast, the average benthic flux of soluble reactive phosphorus was about 12,000 kg/year, of significant magnitude, but less than the advective flux range of 21,500 to 30,000 kg/year. These benthic flux estimates, based on solute diffusion across the sediment-water interface, reveal a significant nutrient source to the water column of the pond which stimulates algal blooms (often autotrophic). This benthic source may be augmented further by bioturbation, bioirrigation and episodic sediment resuspension events.

EFFECT OF NITRATE-BASED BIOREMEDIATION ON CONTAMINANT DISTRIBUTION AND SEDIMENT TOXICITY-COLUMN STUDY

EPA Science Inventory

A laboratory column study was set up to evaluate changes in contaminant distribution and sediment toxicity following nitrate-based bioremediation and to correlate toxicity reduction with loss of fuel components. Glass columns were packed with sediment from an aquifer that had be...

Biodegradation of 17β-Estradiol, Estrone and Testosterone in Stream Sediments

NASA Astrophysics Data System (ADS)

Bradley, P. M.; Chapelle, F. H.; Barber, L. B.; McMahon, P. B.; Gray, J. L.; Kolpin, D. W.

2009-12-01

The potentials for in situ biodegradation of 17β-estradiol (E2), estrone (E1), and testosterone (T) were investigated in three, hydrologically-distinct, WWTP-impacted streams in the United States. Relative differences in the mineralization of [4-14C] substrates were assessed in oxic microcosms containing sediment or water-only from locations upstream and downstream of the WWTP outfall in each system. Upstream samples provided insight into the biodegradative potential of sediment microbial communities that were not under the immediate impact of WWTP effluent. Upstream sediment from all three systems demonstrated significant mineralization of the “A” ring of E2, E1 and T, with the potential of T biodegradation consistently greater than of E2 and no systematic difference in the potentials of E2 and E1. Downstream samples provided insight into the impacts of effluent on reproductive hormone biodegradation. Significant “A” ring mineralization was also observed in downstream sediment, with the potentials for E1 and T mineralization being substantially depressed relative to upstream samples. In marked contrast, the potentials for E2 mineralization immediately downstream of the WWTP outfalls were more than double that of upstream samples. E2 mineralization was also observed in water, albeit at insufficient rate to prevent substantial downstream transport in the water column. The results of this study indicate that, in combination with sediment sorption processes which effectively scavenge hydrophobic contaminants from the water column and immobilize them in the vicinity of the WWTP outfall, aerobic biodegradation of reproductive hormones can be an environmentally important mechanism for non-conservative (destructive) attenuation of hormonal endocrine disruptors in effluent-impacted streams.

Examining offshore sediment-hosted contaminant transport from Hurricane Katrina: Chapter 7A in Science and the storms-the USGS response to the hurricanes of 2005

USGS Publications Warehouse

Swarzenski, Peter W.; Campbell, Pamela L.; Poore, Richard Z.; Osterman, Lisa E.; Rosenbauer, Robert J.

2007-01-01

A rapid-response expedition was organized after the passage of Hurricane Katrina to investigate potential offshore environmental impacts and storm-induced sediment-transport processes. Both water-column and sediment samples were collected on the Louisiana shelf for a full complement of organic, inorganic, and geochronological tracers. Based on excess lead-210 (210Pb) inventories in cores collected before and after Katrina, the surface sediments and their associated geochemical signatures were considerably affected by the passage of this storm.

Response of coliform populations in streambed sediment and water column to changes in nutrient concentrations in water.

PubMed

Shelton, D R; Pachepsky, Y A; Kiefer, L A; Blaustein, R A; McCarty, G W; Dao, T H

2014-08-01

As sediments increasingly become recognized as reservoirs of indicator and pathogen microorganisms, an understanding of the persistence of indicator organisms becomes important for assessment and predictions of microbial water quality. The objective of this work was to observe the response of water column and sediment coliform populations to the change in nutrient concentrations in the water column. Survival experiments were conducted in flow-through chambers containing sandy sediments. Bovine feces were collected fresh and introduced into sediment. Sixteen days later, the same fecal material was autoclaved and diluted to provide three levels - 1×, 0.5×, and 0.1× of nutrient concentrations - spike in water column. Total coliforms, Escherichia coli, and total aerobic heterotrophic bacterial concentrations were monitored in water and sediment. Bacteria responded to the nutrient spike with initial growth both in the water column and in sediment. The response of bacterial concentrations in water column was nonlinear, with no significant changes at 0.1 and .5× spikes, but a substantial change at 1× spike. Bacteria in sediment responded to the spikes at all added nutrient levels. Coliform inactivation rates both in sediment and in water after the initial growth occurred, were not significantly different from the inactivation rates before spike. These results indicate that introduction of nutrients into the water column results in nonlinear response of E. coli concentrations both in water and in sediments, followed by the inactivation with the same rate as before introduction of nutrients. Published by Elsevier Ltd.

Relationships between environmental factors and pathogenic Vibrios in the Northern Gulf of Mexico.

PubMed

Johnson, C N; Flowers, A R; Noriea, N F; Zimmerman, A M; Bowers, J C; DePaola, A; Grimes, D J

2010-11-01

Although autochthonous vibrio densities are known to be influenced by water temperature and salinity, little is understood about other environmental factors associated with their abundance and distribution. Densities of culturable Vibrio vulnificus containing vvh (V. vulnificus hemolysin gene) and V. parahaemolyticus containing tlh (thermolabile hemolysin gene, ubiquitous in V. parahaemolyticus), tdh (thermostable direct hemolysin gene, V. parahaemolyticus pathogenicity factor), and trh (tdh-related hemolysin gene, V. parahaemolyticus pathogenicity factor) were measured in coastal waters of Mississippi and Alabama. Over a 19-month sampling period, vibrio densities in water, oysters, and sediment varied significantly with sea surface temperature (SST). On average, tdh-to-tlh ratios were significantly higher than trh-to-tlh ratios in water and oysters but not in sediment. Although tlh densities were lower than vvh densities in water and in oysters, the opposite was true in sediment. Regression analysis indicated that SST had a significant association with vvh and tlh densities in water and oysters, while salinity was significantly related to vibrio densities in the water column. Chlorophyll a levels in the water were correlated significantly with vvh in sediment and oysters and with pathogenic V. parahaemolyticus (tdh and trh) in the water column. Furthermore, turbidity was a significant predictor of V. parahaemolyticus density in all sample types (water, oyster, and sediment), and its role in predicting the risk of V. parahaemolyticus illness may be more important than previously realized. This study identified (i) culturable vibrios in winter sediment samples, (ii) niche-based differences in the abundance of vibrios, and (iii) predictive signatures resulting from correlations between environmental parameters and vibrio densities.

[Influence of dredging on sediment resuspension and phosphorus transfer in lake: a simulation study].

PubMed

Yu, Ju-Hua; Zhong, Ji-Cheng; Zhang, Yin-Long; Fan, Cheng-Xin; He, Wei; Zhang, Lei; Tang, Zhen-Wu

2012-10-01

A simulated experiment was conducted to investigate the impacts of sediment dredging on sediment resuspension and phosphorus transfer in the summer and winter seasons under the common wind-wave disturbance, and the contaminated sediment used in this study was from Meiliang Bay, Taihu lake. The result showed that 20 cm dredging could effectively inhibit the sediment resuspension in study area, dredging in winter has a better effect than that in summer, and the higher values of the total suspended solid (TSS) in undredged and dredged water column during the process of wind wave disturbance were 7.0 and 2.2, 24.3 and 6.4 times higher than the initial value in summer and winter simulation respectively. The paired-samples t-test result demonstrated that total phosphorus (TP) and phosphate (PO4(3-)-P) loading positively correlated to TSS content in dredged (P<0.01) and undredged water column (P<0.05), which proved that internal phosphorus fulminating release induced by wind-wave disturbance would significantly increase the TP and PO4(3-)-P loading in the water column. The effect of dredging conducted in summer on the TP and PO4(3)-P loading in the water column was negative, but not for winter dredging (P<0.01). The pore water dissolved reactive phosphorus (DRP) profile at water-sediment interface in summer simulation was also investigated by diffusive gradients in thin films (DGT) technique. Diffusion layer of the DRP profile in undredged sediment was wider than that in dredged sediment. However, the DRP diffusion potential in dredged sediment was greater than that in undredged sediment, showing that dredging can effectively reduce the risk of the DRP potential release in dredged pore water, but also would induce the DRP fulminating release in the short time under hydrodynamic action. Generally, dredging was usually deployed during the summer and the autumn. Considering Taihu Lake is a large, shallow, eutrophic lake and the contaminant distribution is spatially heterogeneous, it is vital to determine the optimal time, depth and scope of dredging.

The effect of nitrification in the oxygen balance of the Upper Chattahoochee River, Georgia

USGS Publications Warehouse

Ehlke, Theodore A.

1979-01-01

Oxygen consumption as a result of nitrification, and carbonaceous bacterial oxidation were compared in a 108 kilometer reach of the Chattahoochee River, Georgia. Nitrogenous and carbonaceous oxygen consumption were separated by using an inhibitor of nitrification 1-allyl-2-thiourea. The comparison was conducted in the laboratory using samples collected from the water column. Nitrification accounted for 38 to 52 percent of the total oxygen consumption. Nitrifying bacteria were enumerated from the same reach of the river. The population of Nitrosomonas ranged from 10 to 1,000 per milliliter in the water column and 100 to 100,000 per gram of benthic sediment. The nitrobacter population ranged from 10 to 100 per milliliter in the water column and 100 to 1,000 per gram in the benthic sediment. The concentration of ammonium, nitrite, and nitrate as N was determined from water samples collected throughout the study reach. The average rate of ammonium disappearance and of nitrate appearance was 0.02 milligram per liter per hour of flow time. (Woodard-USGS)

Natural attenuation and biosurfactant-stimulated bioremediation of estuarine sediments contaminated with diesel oil.

PubMed

Bayer, Débora M; Chagas-Spinelli, Alessandra C O; Gavazza, Sávia; Florencio, Lourdinha; Kato, Mario T

2013-09-01

We evaluated the bioremediation, by natural attenuation (NA) and by natural attenuation stimulated (SNA) using a rhamnolipid biosurfactant, of estuarine sediments contaminated with diesel oil. Sediment samples (30 cm) were put into 35 cm glass columns, and the concentrations of the 16 polycyclic aromatic hydrocarbons (PAHs) prioritized by the US Environmental Protection Agency were monitored for 111 days. Naphthalene percolated through the columns more than the other PAHs, and, in general, the concentrations of the lower molecular weight PAHs, consisting of two and three aromatic rings, changed during the first 45 days of treatment, whereas the concentrations of the higher molecular weight PAHs, consisting of four, five, and six rings, were more stable. The higher molecular weight PAHs became more available after 45 days, in the deeper parts of the columns (20-30 cm). Evidence of degradation was observed only for some compounds, such as pyrene, with a total removal efficiency of 82 and 78 % in the NA and SNA treatments, respectively, but without significant difference. In the case of total PAH removal, the efficiencies were significantly different of 82 and 67 %, respectively.

Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory : determination of organophosphate pesticides in bottom sediment by gas chromatography with flame photometric detection

USGS Publications Warehouse

Jha, Virendra Kumar; Wydoski, Duane S.

2003-01-01

A method for the isolation of 20 parent organophosphate pesticides and 5 pesticide degradates from bottom-sediment samples is described. The compound O-ethyl-O-methyl-S-proplyphosphorothioate is reported as an estimated concentration because of variable performance. In this method, the sediment samples are centrifuged to remove excess waster mixed with anhydrous sodium sulfate and Soxhlet extracted overnight with dichloromethane (93 percent) and methanol (7 percent). The extract is concentrated and then filtered through a 0.2-micrometer polytetrafluoroethylene membrane syringe filter. An aliquot of the sample extract is quantitatively injected onto two polystyrene-divinylbenzene gel-permeation chromatographic columns connected in series. The compounds are eluted with dichloromethane and a fraction is collected for analysis, with some coextracted interferences, including elemental sulfur, separated and discarded. The aliquot is concentrated and solvent exchanged to ethyl acetate. The extract is analyzed by dual capillary-column gas chromatography with flame photometric detection. Single-operator method detection limits in sodium sulfate matrix samples ranged from 0.81 to 2 micrograms per kilogram. Method performance was validated by spiking all compounds into three different solid matrices (sodium sulfate, bed sediment from Clear Creek, and bed sediment from Evergreen Lake) at three different concentrations. Eight replicates were analyzed at each concentration in each matrix. Mean recoveries of method compounds spiked in Clear Creek samples ranged from 43 to 110 percent, and those in Evergreen Lake samples ranged from 62 to 118 percent for all pesticides. Mean recoveries of method compounds spiked in reagent sodium sulfate samples ranged from 41 to 101 percent for all pesticides. The only exception was O-ethyl-O-methyl-S-propylphosphorothioate, which had an average recovery of 35 percent, and, thus, sample concentration is reported as estimated ('E' remark code).

Pollution and ecological risk assessment of heavy metals in the soil-plant system and the sediment-water column around a former Pb/Zn-mining area in NE Morocco.

PubMed

El Azhari, Abdellah; Rhoujjati, Ali; El Hachimi, Moulay Laârabi; Ambrosi, Jean-Paul

2017-10-01

This study discussed the environmental fate and ecological hazards of heavy metals in the soil-plant system and sediment-water column around the former Pb-Zn mining Zeïda district, in Northeastern Morocco. Spatial distribution, pollution indices, and cluster analysis were applied for assessing Pb, Zn, As, Cu and Cd pollution levels and risks. The geo-accumulation index (I geo ) was determined using two different geochemical backgrounds: i) the commonly used upper crust values, ii) local geochemical background calculated with exploratory data analysis. The soils in the vicinity of the tailings, as well as the sediments downstream of the latter, displayed much higher metal concentrations, I geo, and potential ecology risk coefficient values than other sites, classifying these sites as highly contaminated and severely hazardous. The concentrations of Pb in contaminated sediment samples also exceeded the PEC limits and are expected to cause harmful effects on sediment-dwelling organisms. Based on the comparison with the toxicity limits, the most contaminated plant samples were found around the tailings piles. The metal concentrations in both raw and filtrated water samples were overall below the drinking water standards in samples upstream and downstream of the mining center, indicating that heavy metals levels in the Moulouya River surface waters were not affected by the tailings spill. Cluster analysis suggest that: i) Pb and Zn in sediments were derived from the abandoned tailings and are mainly stored and transported as particle-bound to the bedload, ii) Pb, Zn, and Cu in the soil-plant system were related to the dispersion of tailings materials while As and Cd originated primarily from natural geological background in both the soil-plant and the water-sediment systems. Copyright © 2017 Elsevier Inc. All rights reserved.

Assessing overland sediment transport to the Apalachicola River/Bay in Florida

NASA Astrophysics Data System (ADS)

Smar, D. E.; Hagen, S.; Daranpob, A.; Passeri, D.

2011-12-01

An ongoing study in Franklin County, Florida is focused on classifying the mechanisms of sediment transport from the overland areas to eventual deposition in the Apalachicola River and surrounding estuaries. Sediment cores and water column samples were collected at various locations along the Apalachicola River, its tributaries, and distributaries over a two-week period during the wet season. A preliminary particle size distribution analysis of the sediment cores and water column samples demonstrates decreasing particle sizes as the river and wetlands progress toward the ocean. Daily water samples from the mouth of the Apalachicola River and two distributaries reveal fluctuating total suspended solid (TSS) concentrations. To understand these deviations, flow rate and water level at each location is inspected. Because the nearest USGS gage is approximately 16 miles upstream from these sites, investigation of the hydrodynamic influences of sediment transport is conducted by developing a hydrodynamic model simulating river flow and tides in the Apalachicola River and bay system. With spatially accurate flow rates and water levels, an attempt can be made to correlate flow rate with fluctuating TSS concentrations. Precipitation events during the sampling period also support spikes in the TSS concentrations as expected. Assessing sediment transport to the river/bay system will lead to a better understanding of the regression or accretion of the river's alluvial fan and the marsh platform. High flow periods following extreme rain events (which are expected to intensify under global climate change) transport more sediment downstream, however, the interaction with tidal and sea level effects are still being analyzed. With rising sea levels, it is expected that the alluvial fan will recede and wetland areas may migrate inland gradually transforming existing dry lands such as pine forests into new wetland regions. Future work will include an analysis of the tidal cycle during the sampling period to more accurately classify fluctuation of TSS concentration in the downstream samples. The data collection process and laboratory analysis will also be repeated in the dry season, and subsequent years to observe temporal trends.

Origins and fates of PAHs in the coastal marine environment off San Diego (California)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zeng, E.Y.; Yu, C.C.; Vista, C.L.

1995-12-31

The main inputs of anthropogenic hydrocarbons to the coastal marine environment off San Diego include the Point Lama wastewater outfall (City of San Diego), Tijuana River (crossing the boarder between the US and Mexico) and several storm drains along the coastline and in San Diego Bay, inadvertent spills, and aerial deposition. Samples collected (in January and June 1994) from the Point Loma wastewater effluent, Tijuana River runoff, and microlayer, sediment trap, and surface sediment at several locations adjacent to the Point Loma outfall, entrance of Tijuana River into the ocean, and San Diego Bay (near the San Diego International Airport)more » were analyzed to determine the origins and fates of PAHs in the coastal marine environment. Alkyl homologue distributions (AHDS) for naphthalene indicated a mainly petrogenic origin for low molecular-weight PAHs in the effluent, water column particle, and sediment near the outfall. Parent compound distributions (PCDS) for PAHs with molecular weights 178, 202, 228, 252, 276, and 278 showed combustion-related inputs in the water column particle and sediment, especially for mid to high molecular-weight PAHs. PAHs with molecular weight equal to or higher than 252 were not detected in the effluent. The compositions of PAHs were substantially different in the effluent particulates and filtrates, implying a great deal about the fates of PAHs from the outfall and their bioaccumulation by organisms. PAHs detected in Tijuana River runoff had similar AHDs and PCDs to those of the Point Loma outfall effluent. AHDs in the San Diego Bay sediment exhibited marked seasonal variation; low molecular-weight PAHs were significantly combustion-related in January and more petrogenic in June. Microlayer samples generally contained dominant combustion-generated PAHs. The impact of the wastewater outfall discharge on the nearby water column and sediment appeared compromised by other non-point source inputs.« less

Organic matter mineralization and trace element post-depositional redistribution in Western Siberia thermokarst lake sediments

NASA Astrophysics Data System (ADS)

Audry, S.; Pokrovsky, O. S.; Shirokova, L. S.; Kirpotin, S. N.; Dupré, B.

2011-11-01

This study reports the very first results on high-resolution sampling of sediments and their porewaters from three thermokarst (thaw) lakes representing different stages of ecosystem development located within the Nadym-Pur interfluve of the Western Siberia plain. Up to present time, the lake sediments of this and other permafrost-affected regions remain unexplored regarding their biogeochemical behavior. The aim of this study was to (i) document the early diagenesic processes in order to assess their impact on the organic carbon stored in the underlying permafrost, and (ii) characterize the post-depositional redistribution of trace elements and their impact on the water column. The estimated organic carbon (OC) stock in thermokarst lake sediments of 14 ± 2 kg m-2 is low compared to that reported for peat soils from the same region and denotes intense organic matter (OM) mineralization. Mineralization of OM in the thermokarst lake sediments proceeds under anoxic conditions in all the three lakes. In the course of the lake development, a shift in mineralization pathways from nitrate and sulfate to Fe- and Mn-oxyhydroxides as the main terminal electron acceptors in the early diagenetic reactions was suggested. This shift was likely promoted by the diagenetic consumption of nitrate and sulfate and their gradual depletion in the water column due to progressively decreasing frozen peat lixiviation occurring at the lake's borders. Trace elements were mobilized from host phases (OM and Fe- and Mn-oxyhydroxides) and partly sequestered in the sediment in the form of authigenic Fe-sulfides. Arsenic and Sb cycling was also closely linked to that of OM and Fe- and Mn-oxyhydroxides. Shallow diagenetic enrichment of particulate Sb was observed in the less mature stages. As a result of authigenic sulfide precipitation, the sediments of the early stage of ecosystem development were a sink for water column Cu, Zn, Cd, Pb and Sb. In contrast, at all stages of ecosystem development, the sediments were a source of dissolved Co, Ni and As to the water column. However, the concentrations of these trace elements remained low in the bottom waters, indicating that sorption processes on Fe-bounding particles and/or large-size organo-mineral colloids could mitigate the impact of post-depositional redistribution of toxic elements on the water column.

Organic matter mineralization and trace element post-depositional redistribution in Western Siberia thermokarst lake sediments

NASA Astrophysics Data System (ADS)

Audry, S.; Pokrovsky, O. S.; Shirokova, L. S.; Kirpotin, S. N.; Dupré, B.

2011-08-01

This study reports the very first results on high-resolution sampling of sediments and their porewaters from three thermokarst (thaw) lakes representing different stages of ecosystem development located within the Nadym-Pur interfluve of the Western Siberia plain. Up to present time, the lake sediments of this and other permafrost-affected regions remain unexplored regarding their biogeochemical behavior. The aim of this study was to (i) document the early diagenesic processes in order to assess their impact on the organic carbon stored in the underlying permafrost, and (ii) characterize the post-depositional redistribution of trace elements and their impact on the water column. The estimated organic carbon (OC) stock in thermokarst lake sediments of 14 ± 2 kg m-2 is low compared to that reported for peat soils from the same region and denotes intense organic matter (OM) mineralization. Mineralization of OM in the thermokarst lake sediments proceeds under anoxic conditions in all the three lakes. In the course of the lake development, a shift in mineralization pathways was evidenced from nitrate and sulfate to Fe- and Mn-oxyhydroxides as the main terminal electron acceptors in the early diagenetic reactions. This shift was promoted by the diagenetic consumption of nitrate and sulfate and their gradual depletion in the water column due to progressively decreasing frozen peat lixiviation occurring at the lake's borders. Trace elements were mobilized from host phases (OM and Fe- and Mn-oxyhydroxides) and partly sequestered in the sediment in the form of authigenic Fe-sulfides. Arsenic and Sb cycling was also closely linked to that of OM and Fe- and Mn-oxyhydroxides. Shallow diagenetic enrichment of particulate Sb was observed in the less mature stages. As a result of authigenic sulfide precipitation, the sediments of the early stage of ecosystem development were a sink for water column Cu, Zn, Cd, Pb and Sb. In contrast, at all stages of ecosystem development, the sediments were a source of dissolved Co, Ni and As to the water column. However, the concentrations of these trace elements remained low in the bottom waters, indicating that sorption processes on Fe-bounding particles and/or large-size organo-mineral colloids could mitigate the impact of post-depositional redistribution of toxic elements on the water column.

A new cytotoxic sesquiterpene quinone produced by Penicillium sp. F00120 isolated from a deep sea sediment sample.

PubMed

Lin, Xiuping; Zhou, Xuefeng; Wang, Fazuo; Liu, Kaisheng; Yang, Bin; Yang, Xianwen; Peng, Yan; Liu, Juan; Ren, Zhe; Liu, Yonghong

2012-01-01

A new fungal strain, displaying strong toxic activity against brine shrimp larvae, was isolated from a deep sea sediment sample collected at a depth of 1300 m. The strain, designated as F00120, was identified as a member of the genus Penicillium on the basis of morphology and ITS sequence analysis. One new sesquiterpene quinone, named penicilliumin A (1), along with two known compounds ergosterol (2) and ergosterol peroxide (3), were isolated and purified from the cultures of F00120 by silica gel column, Sephadex LH-20 column, and preparative thin layer chromatography. Their structures were elucidated by detailed nuclear magnetic resonance (NMR) and mass spectroscopic (MS) analysis as well as comparison with literature data. The new compound penicilliumin A inhibited in vitro proliferation of mouse melanoma (B16), human melanoma (A375), and human cervical carcinoma (Hela) cell lines moderately.

Use of slow filtration columns to assess oxygen respiration, consumption of dissolved organic carbon, nitrogen transformations, and microbial parameters in hyporheic sediments.

PubMed

Mermillod-Blondin, F; Mauclaire, L; Montuelle, B

2005-05-01

Biogeochemical processes mediated by microorganisms in river sediments (hyporheic sediments) play a key role in river metabolism. Because biogeochemical reactions in the hyporheic zone are often limited to the top few decimetres of sediments below the water-sediment interface, slow filtration columns were used in the present study to quantify biogeochemical processes (uptakes of O2, DOC, and nitrate) and the associated microbial compartment (biomass, respiratory activity, and hydrolytic activity) at a centimetre scale in heterogeneous (gravel and sand) sediments. The results indicated that slow filtration columns recreated properly the aerobic-anaerobic gradient classically observed in the hyporheic zone. O2 and NO3- consumptions (256 +/- 13 microg of O2 per hour and 14.6 +/- 6.1 microg of N-NO3- per hour) measured in columns were in the range of values measured in different river sediments. Slow filtration columns also reproduced the high heterogeneity of the hyporheic zone with the presence of anaerobic pockets in sediments where denitrification and fermentation processes occurred. The respiratory and hydrolytic activities of bacteria were strongly linked with the O2 consumption in the experimental system, highlighting the dominance of aerobic processes in our river sediments. In comparison with these activities, the bacterial biomass (protein content) integrated both aerobic and anaerobic processes and could be used as a global microbial indicator in our system. Finally, slow filtration columns are an appropriate tool to quantify in situ rates of biogeochemical processes and to determine the relationship between the microbial compartment and the physico-chemical environment in coarse river sediments.

Relationships between Environmental Factors and Pathogenic Vibrios in the Northern Gulf of Mexico ▿ †

PubMed Central

Johnson, C. N.; Flowers, A. R.; Noriea, N. F.; Zimmerman, A. M.; Bowers, J. C.; DePaola, A.; Grimes, D. J.

2010-01-01

Although autochthonous vibrio densities are known to be influenced by water temperature and salinity, little is understood about other environmental factors associated with their abundance and distribution. Densities of culturable Vibrio vulnificus containing vvh (V. vulnificus hemolysin gene) and V. parahaemolyticus containing tlh (thermolabile hemolysin gene, ubiquitous in V. parahaemolyticus), tdh (thermostable direct hemolysin gene, V. parahaemolyticus pathogenicity factor), and trh (tdh-related hemolysin gene, V. parahaemolyticus pathogenicity factor) were measured in coastal waters of Mississippi and Alabama. Over a 19-month sampling period, vibrio densities in water, oysters, and sediment varied significantly with sea surface temperature (SST). On average, tdh-to-tlh ratios were significantly higher than trh-to-tlh ratios in water and oysters but not in sediment. Although tlh densities were lower than vvh densities in water and in oysters, the opposite was true in sediment. Regression analysis indicated that SST had a significant association with vvh and tlh densities in water and oysters, while salinity was significantly related to vibrio densities in the water column. Chlorophyll a levels in the water were correlated significantly with vvh in sediment and oysters and with pathogenic V. parahaemolyticus (tdh and trh) in the water column. Furthermore, turbidity was a significant predictor of V. parahaemolyticus density in all sample types (water, oyster, and sediment), and its role in predicting the risk of V. parahaemolyticus illness may be more important than previously realized. This study identified (i) culturable vibrios in winter sediment samples, (ii) niche-based differences in the abundance of vibrios, and (iii) predictive signatures resulting from correlations between environmental parameters and vibrio densities. PMID:20817802

Development of a numerical model for calculating exposure to toxic and nontoxic stressors in the water column and sediment from drilling discharges.

PubMed

Rye, Henrik; Reed, Mark; Frost, Tone Karin; Smit, Mathijs G D; Durgut, Ismail; Johansen, Øistein; Ditlevsen, May Kristin

2008-04-01

Drilling discharges are complex mixtures of chemical components and particles which might lead to toxic and nontoxic stress in the environment. In order to be able to evaluate the potential environmental consequences of such discharges in the water column and in sediments, a numerical model was developed. The model includes water column stratification, ocean currents and turbulence, natural burial, bioturbation, and biodegradation of organic matter in the sediment. Accounting for these processes, the fate of the discharge is modeled for the water column, including near-field mixing and plume motion, far-field mixing, and transport. The fate of the discharge is also modeled for the sediment, including sea floor deposition, and mixing due to bioturbation. Formulas are provided for the calculation of suspended matter and chemical concentrations in the water column, and burial, change in grain size, oxygen depletion, and chemical concentrations in the sediment. The model is fully 3-dimensional and time dependent. It uses a Lagrangian approach for the water column based on moving particles that represent the properties of the release and an Eulerian approach for the sediment based on calculation of the properties of matter in a grid. The model will be used to calculate the environmental risk, both in the water column and in sediments, from drilling discharges. It can serve as a tool to define risk mitigating measures, and as such it provides guidance towards the "zero harm" goal.

Dissolved methane concentrations in the water column and surface sediments of Hanna Shoal and Barrow Canyon, Northern Chukchi Sea

NASA Astrophysics Data System (ADS)

Lapham, Laura; Marshall, Kathleen; Magen, Cédric; Lyubchich, Viacheslav; Cooper, Lee W.; Grebmeier, Jacqueline M.

2017-10-01

Current estimates of methane (CH4) flux suggest that Arctic shelves may be a significant source of atmospheric CH4, a potent greenhouse gas. However, little information is known about the CH4 flux from most Arctic shelves, other than the East Siberian Arctic Shelf. We report here dissolved CH4 concentrations in the water column and within surface sediments of the Northern Chukchi Sea. We hypothesized that this area contains high concentrations of CH4 because it receives nutrient rich waters through the Bering Strait, promoting primary production that enhances an organic-rich material flux to the seafloor and eventual microbial methanogenesis in the sediments. In August 2012, as part of the Chukchi Sea Offshore Monitoring in Drilling Area (COMIDA) project, fourteen stations were sampled on Hanna Shoal, a shallow feature on the shelf, and ten stations across the undersea Barrow Canyon. On Hanna Shoal, water column CH4 concentrations ranged from 14 to 74 nM, and surface concentrations were up to 15 times supersaturated in CH4 compared to equilibrium with the average atmospheric concentrations (3 nM). CH4 concentrations at the sediment-water interface were around 1,500 nM, and typically increased with depth in the sediment. At the head of Barrow Canyon, water column CH4 concentrations ranged from 5 to 46 nM, with the highest concentrations in the deepest waters that were sampled (118 m). Overall, the calculated fluxes to the atmosphere ranged from 1 to 80 μmol CH4 m-2 d-1 for Hanna Shoal and 4 to 17 μmol CH4 m-2 d-1 across the Barrow Canyon stations. Although there was a large range in these fluxes, the average atmospheric flux (20 μmol CH4 m-2 d-1) across Hanna Shoal was 12 times lower than the flux reported from the East Siberian Arctic Shelf in summer. We conclude that while there is a positive flux of CH4 to the atmosphere, this part of the Chukchi Sea is not a significant source of atmospheric CH4 compared to the East Siberian Sea shelf.

Bathymetry, substrate and circulation in Westcott Bay, San Juan Islands, Washington

USGS Publications Warehouse

Grossman, Eric E.; Stevens, Andrew W.; Curran, Chris; Smith, Collin; Schwartz, Andrew

2007-01-01

Nearshore bathymetry, substrate type, and circulation patterns in Westcott Bay, San Juan Islands, Washington, were mapped using two acoustic sonar systems, video and direct sampling of seafloor sediments. The goal of the project was to characterize nearshore habitat and conditions influencing eelgrass (Z. marina) where extensive loss has occurred since 1995. A principal hypothesis for the loss of eelgrass is a recent decrease in light availability for eelgrass growth due to increase in turbidity associated with either an increase in fine sedimentation or biological productivity within the bay. To explore sources for this fine sediment and turbidity, a dual-frequency Biosonics sonar operating at 200 and 430 kHz was used to map seafloor depth, morphology and vegetation along 69 linear kilometers of the bay. The higher frequency 430 kHz system also provided information on particulate concentrations in the water column. A boat-mounted 600 kHz RDI Acoustic Doppler Current Profiler (ADCP) was used to map current velocity and direction and water column backscatter intensity along another 29 km, with select measurements made to characterize variations in circulation with tides. An underwater video camera was deployed to ground-truth acoustic data. Seventy one sediment samples were collected to quantify sediment grain size distributions across Westcott Bay. Sediment samples were analyzed for grain size at the Western Coastal and Marine Geology Team sediment laboratory in Menlo Park, Calif. These data reveal that the seafloor near the entrance to Westcott Bay is rocky with a complex morphology and covered with dense and diverse benthic vegetation. Current velocities were also measured to be highest at the entrance and along a deep channel extending 1 km into the bay. The substrate is increasingly comprised of finer sediments with distance into Westcott Bay where current velocities are lower. This report describes the data collected and preliminary findings of USGS Cruise B-6-07-PS conducted between May 31, 2007 and June 5, 2007.

Multi-residue method for the analysis of 85 current-use and legacy pesticides in bed and suspended sediments

USGS Publications Warehouse

Smalling, K.L.; Kuivila, K.M.

2008-01-01

A multi-residue method was developed for the simultaneous determination of 85 current-use and legacy organochlorine pesticides in a single sediment sample. After microwave-assisted extraction, clean-up of samples was optimized using gel permeation chromatography and either stacked carbon and alumina solid-phase extraction cartridges or a deactivated Florisil column. Analytes were determined by gas chromatography with ion-trap mass spectrometry and electron capture detection. Method detection limits ranged from 0.6 to 8.9 ??g/kg dry weight. Bed and suspended sediments from a variety of locations were analyzed to validate the method and 29 pesticides, including at least 1 from every class, were detected.

Application of capillary gas chromatography mass spectrometry/computer techniques to synoptic survey of organic material in bed sediment

USGS Publications Warehouse

Steinheimer, T.R.; Pereira, W.E.; Johnson, S.M.

1981-01-01

A bed sediment sample taken from an area impacted by heavy industrial activity was analyzed for organic compounds of environmental significance. Extraction was effected on a Soxhlet apparatus using a freeze-dried sample. The Soxhlet extract was fractionated by silica gel micro-column adsorption chromatography. Separation and identification of the organic compounds was accomplished by capillary gas chromatography/mass spectrometry techniques. More than 50 compounds were identified; these include saturated hydrocarbons, olefins, aromatic hydrocarbons, alkylated polycyclic aromatic hydrocarbons, and oxygenated compounds such as aldehydes and ketones. The role of bed sediments as a source or sink for organic pollutants is discussed. ?? 1981.

The Relationship Between Land Management, Fecal Indicator Bacteria, and the Occurrence of Campylobacter and Listeria Spp. in Water and Sediments During Synoptic Sampling In The South Fork Broad River Watershed, Northeast Georgia, U.S.A.

EPA Science Inventory

Fecal indicator bacteria (FIB) and pathogens stored in the bed sediments of streams and rivers may be mobilized into the water column affecting overall water quality. Furthermore, land management may play an important role in the concentrations of FIB and the occurrence of pathog...

Quantifying the Benthic Source of Nutrients to the Water Column of Upper Klamath Lake, Oregon

USGS Publications Warehouse

Kuwabara, James S.; Lynch, Dennis D.; Topping, Brent R.; Murphy, Fred; Carter, James L.; Simon, Nancy S.; Parcheso, Francis; Wood, Tamara M.; Lindenberg, Mary K.; Wiese, Katryn; Avanzino, Ronald J.

2007-01-01

Executive Summary Five sampling trips were coordinated in April, May and August 2006, and May and July 2007 to sample the water column and benthos of Upper Klamath Lake, OR (Fig. 1; Table 1), before, during and after the annual cyanophyte bloom of Aphanizomenon flos-aquae (AFA). A pore-water profiler was designed and fabricated to obtain the first high-resolution (centimeter-scale) estimates of the vertical concentration gradients for diffusive-flux determinations. Estimates based on molecular diffusion may underestimate benthic flux because solute transport across the sediment-water interface can be enhanced by processes including bioturbation, bioirrigation and ground-water advection. Water-column and benthic samples were also collected to help interpret spatial and temporal trends in diffusive-flux estimates. Data from these samples complement geochemical analyses of bottom-sediments taken from Upper Klamath Lake (UKL) in 2005. This ongoing study provides information necessary for developing process-interdependent solute-transport models for the watershed (that is, models integrating physical, geochemical and biological processes), and supports efforts to evaluate remediation or load-allocation strategies. To augment studies funded by the U.S. Bureau of Reclamation (USBR), the Department of Interior supported an additional full deployment of pore-water profilers in July 2007, during the summer AFA bloom. Results from this recent field trip are not fully completed. Data not presented herein will be included in a subsequent publication, scheduled for March 2009.

Diatom species abundance and morphologically-based dissolution proxies in coastal Southern Ocean assemblages

NASA Astrophysics Data System (ADS)

Warnock, Jonathan P.; Scherer, Reed P.

2015-07-01

Taphonomic processes alter diatom assemblages in sediments, thus potentially negatively impacting paleoclimate records at various rates across space, time, and taxa. However, quantitative taphonomic data is rarely included in diatom-based paleoenvironmental reconstructions and no objective standard exists for comparing diatom dissolution in sediments recovered from marine depositional settings, including the Southern Ocean's opal belt. Furthermore, identifying changes to diatom dissolution through time can provide insight into the efficiency of both upper water column nutrient recycling and the biological pump. This is significant in that reactive metal proxies (e.g. Al, Ti) in the sediments only account for post-depositional dissolution, not the water column where the majority of dissolution occurs. In order to assess the range of variability of responses to dissolution in a typical Southern Ocean diatom community and provide a quantitative guideline for assessing taphonomic variability in diatoms recovered from core material, a sediment trap sample was subjected to controlled, serial dissolution. By evaluating dissolution-induced changes to diatom species' relative abundance, three preservational categories of diatoms have been identified: gracile, intermediate, and robust. The relative abundances of these categories can be used to establish a preservation grade for diatom assemblages. However, changes to the relative abundances of diatom species in sediment samples may reflect taphonomic or ecological factors. In order to address this complication, relative abundance changes have been tied to dissolution-induced morphological change to the areolae of Fragilariopsis curta, a significant sea-ice indicator in Southern Ocean sediments. This correlation allows differentiation between gracile species loss to dissolution versus ecological factors or sediment winnowing. These results mirror a similar morphological dissolution index from a parallel study utilizing Fragilariopsis kerguelensis, suggesting that results are applicable to a broad spectrum of diatoms typically preserved in the sediments.

Dynamic responses of the benthic bacterial community at the Western English Channel observatory site L4 are driven by deposition of fresh phytodetritus

NASA Astrophysics Data System (ADS)

Tait, Karen; Airs, Ruth L.; Widdicombe, Claire E.; Tarran, Glen A.; Jones, Mark R.; Widdicombe, Stephen

2015-09-01

The impact of the seasonal deposition of phytoplankton and phytodetritus on surface sediment bacterial abundance and community composition was investigated at the Western English Channel site L4. Sediment and water samples were collected from January to September in 2012, increasing in frequency during periods of high water column phytoplankton abundance. Compared to the past two decades, the spring bloom in 2012 was both unusually long in duration and contained higher than average biomass. Within spring months, the phytoplankton bloom was well mixed through the water column and showed accumulations near the sea bed, as evidenced by flow cytometry measurements of nanoeukaryotes, water column chlorophyll a and the appearance of pelagic phytoplankton at the sediment. Measurements of chlorophyll and chlorophyll degradation products indicated phytoplankton material was heavily degraded after it reached the sediment surface: the nature of the chlorophyll degradation products (predominantly pheophorbide, pyropheophorbide and hydroxychlorophyllone) was indicative of grazing activity. The abundance of bacterial 16S rRNA genes g-1 sediment (used as a proxy for bacterial biomass) increased markedly with the onset of the phytoplankton bloom, and correlated with measurements of chlorophyll at the surface sediment. Together, this suggests that bacteria may have responded to nutrients released via grazing activity. In depth sequencing of the 16S rRNA genes indicated that the composition of the bacterial community shifted rapidly through-out the prolonged spring bloom period. This was primarily due to an increase in the relative sequence abundance of Flavobacteria.

Pre-treatments, characteristics, and biogeochemical dynamics of dissolved organic matter in sediments: A review.

PubMed

Chen, Meilian; Hur, Jin

2015-08-01

Dissolved organic matter (DOM) in sediments, termed here sediment DOM, plays a variety of important roles in global biogeochemical cycling of carbon and nutrients as well as in the fate and transport of xenobiotics. Here we reviewed sediment DOM, including pore waters and water extractable organic matter from inland and coastal sediments, based on recent literature (from 1996 to 2014). Sampling, pre-treatment, and characterization methods for sediment DOM were summarized. The characteristics of sediment DOM have been compared along an inland to coastal ecosystems gradient and also with the overlying DOM in water column to distinguish the unique nature of it. Dissolved organic carbon (DOC) from inland sediment DOM was generally higher than coastal areas, while no notable differences were found for their aromaticity and apparent molecular weight. Fluorescence index (FI) revealed that mixed sources are dominant for inland sediment DOM, but marine end-member prevails for coastal sediment DOM. Many reports showed that sediments operate as a net source of DOC and chromophoric DOM (CDOM) to the water column. Sediment DOM has shown more enrichment of nitrogen- and sulfur-containing compounds in the elemental signature than the overlying DOM. Fluorescent fingerprint investigated by excitation-emission matrix coupled with parallel factor analysis (EEM-PARAFAC) further demonstrated the characteristics of sediment DOM lacking in the photo-oxidized and the intermediate components, which are typically present in the overlying surface water. In addition, the biogeochemical changes in sediment DOM and the subsequent environmental implications were discussed with the focus on the binding and the complexation properties with pollutants. Copyright © 2015 Elsevier Ltd. All rights reserved.

Occurrence and partitioning of antibiotic compounds found in the water column and bottom sediments from a stream receiving two wastewater treatment plant effluents in northern New Jersey, 2008.

PubMed

Gibs, Jacob; Heckathorn, Heather A; Meyer, Michael T; Klapinski, Frank R; Alebus, Marzooq; Lippincott, Robert L

2013-08-01

An urban watershed in northern New Jersey was studied to determine the presence of four classes of antibiotic compounds (macrolides, fluoroquinolones, sulfonamides, and tetracyclines) and six degradates in the water column and bottom sediments upstream and downstream from the discharges of two wastewater treatment plants (WWTPs) and a drinking-water intake (DWI). Many antibiotic compounds in the four classes not removed by conventional WWTPs enter receiving waters and partition to stream sediments. Samples were collected at nine sampling locations on 2 days in September 2008. Two of the nine sampling locations were background sites upstream from two WWTP discharges on Hohokus Brook. Another background site was located upstream from a DWI on the Saddle River above the confluence with Hohokus Brook. Because there is a weir downstream of the confluence of Hohokus Brook and Saddle River, the DWI receives water from Hohokus Brook at low stream flows. Eight antibiotic compounds (azithromycin (maximum concentration 0.24 μg/L), ciprofloxacin (0.08 μg/L), enrofloxacin (0.015 μg/L), erythromycin (0.024 μg/L), ofloxacin (0.92 μg/L), sulfamethazine (0.018 μg/L), sulfamethoxazole (0.25 μg/L), and trimethoprim (0.14 μg/L)) and a degradate (erythromycin-H2O (0.84 μg/L)) were detected in the water samples from the sites downstream from the WWTP discharges. The concentrations of six of the eight detected compounds and the detected degradate compound decreased with increasing distance downstream from the WWTP discharges. Azithromycin, ciprofloxacin, ofloxacin, and trimethoprim were detected in stream-bottom sediments. The concentrations of three of the four compounds detected in sediments were highest at a sampling site located downstream from the WWTP discharges. Trimethoprim was detected in the sediments from a background site. Pseudo-partition coefficients normalized for streambed sediment organic carbon concentration were calculated for azithromycin, ciprofloxacin, and ofloxacin. Generally, there was good agreement between the decreasing order of the pseudo-partition coefficients in this study and the order reported in the literature. Published by Elsevier B.V.

Occurence of antibiotic compounds found in the water column and bottom sediments from a stream receiving two waste water treatment plant effluents in northern New Jersey, 2008

USGS Publications Warehouse

Gibs, Jacob; Heckathorn, Heather A.; Meyer, Michael T.; Klapinski, Frank R.; Alebus, Marzooq; Lippincott, Robert

2013-01-01

An urban watershed in northern New Jersey was studied to determine the presence of four classes of antibiotic compounds (macrolides, fluoroquinolones, sulfonamides, and tetracyclines) and six degradates in the water column and bottom sediments upstream and downstream from the discharges of two wastewater treatment plants (WWTPs) and a drinking-water intake (DWI). Many antibiotic compounds in the four classes not removed by conventional WWTPs enter receiving waters and partition to stream sediments. Samples were collected at nine sampling locations on 2 days in September 2008. Two of the nine sampling locations were background sites upstream from two WWTP discharges on Hohokus Brook. Another background site was located upstream from a DWI on the Saddle River above the confluence with Hohokus Brook. Because there is a weir downstream of the confluence of Hohokus Brook and Saddle River, the DWI receives water from Hohokus Brook at low stream flows. Eight antibiotic compounds (azithromycin (maximum concentration 0.24 μg/L), ciprofloxacin (0.08 μg/L), enrofloxacin (0.015 μg/L), erythromycin (0.024 μg/L), ofloxacin (0.92 μg/L), sulfamethazine (0.018 μg/L), sulfamethoxazole (0.25 μg/L), and trimethoprim (0.14 μg/L)) and a degradate (erythromycin-H2O (0.84 μg/L)) were detected in the water samples from the sites downstream from the WWTP discharges. The concentrations of six of the eight detected compounds and the detected degradate compound decreased with increasing distance downstream from the WWTP discharges. Azithromycin, ciprofloxacin, ofloxacin, and trimethoprim were detected in stream-bottom sediments. The concentrations of three of the four compounds detected in sediments were highest at a sampling site located downstream from the WWTP discharges. Trimethoprim was detected in the sediments from a background site. Pseudo-partition coefficients normalized for streambed sediment organic carbon concentration were calculated for azithromycin, ciprofloxacin, and ofloxacin. Generally, there was good agreement between the decreasing order of the pseudo-partition coefficients in this study and the order reported in the literature.

Hydrocarbon Mineralization in Sediments and Plasmid Incidence in Sediment Bacteria from the Campeche Bank

PubMed Central

Leahy, Joseph G.; Somerville, Charles C.; Cunningham, Kelly A.; Adamantiades, Grammenos A.; Byrd, Jeffrey J.; Colwell, Rita R.

1990-01-01

Rates of degradation of radiolabeled hydrocarbons and incidence of bacterial plasmid DNA were investigated in sediment samples collected from the Campeche Bank, Gulf of Mexico, site of an offshore oil field containing several petroleum platforms. Overall rates of mineralization of [14C]hexadecane and [14C]phenanthrene measured for sediments were negligible; <1% of the substrate was converted to CO2 in all cases. Low mineralization rates are ascribed to nutrient limitations and to lack of adaptation by microbial communities to hydrocarbon contaminants. Plasmid frequency data for sediment bacteria similarly showed no correlation with proximity to the oil field, but, instead, showed correlation with water column depth at each sampling site. Significant differences between sites were observed for proportion of isolates carrying single or multiple plasmids and mean number of plasmids per isolate, each of which increased as a function of depth. PMID:16348204

Microbial diversity and stratification of South Pacific abyssal marine sediments.

PubMed

Durbin, Alan M; Teske, Andreas

2011-12-01

Abyssal marine sediments cover a large proportion of the ocean floor, but linkages between their microbial community structure and redox stratification have remained poorly constrained. This study compares the downcore gradients in microbial community composition to porewater oxygen and nitrate concentration profiles in an abyssal marine sediment column in the South Pacific Ocean. Archaeal 16S rRNA clone libraries showed a stratified archaeal community that changed from Marine Group I Archaea in the aerobic and nitrate-reducing upper sediment column towards deeply branching, uncultured crenarchaeotal and euryarchaeotal lineages in nitrate-depleted, anaerobic sediment horizons. Bacterial 16S rRNA clone libraries revealed a similar shift on the phylum and subphylum level within the bacteria, from a complex community of Alpha-, Gamma- and Deltaproteobacteria, Actinobacteria and Gemmatimonadetes in oxic surface sediments towards uncultured Chloroflexi and Planctomycetes in the anaerobic sediment column. The distinct stratification of largely uncultured bacterial and archaeal groups within the oxic and nitrate-reducing marine sediment column provides initial constraints for their microbial habitat preferences. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

A ten year summary of concurrent ambient water column and sediment toxicity tests in the Chesapeake Bay watershed: 1990-1999.

PubMed

Hall, Lenwood W; Anderson, Ronald D; Alden, Raymond W

2002-06-01

The goal of this study was to identify the relative toxicity of ambient areas in the Chesapeake Bay watershed by using a suite of concurrent water column and sediment toxicity tests at seventy-five ambient stations in 20 Chesapeake Bay rivers from 1990 through 1999. Spatial and temporal variability was examined at selected locations throughout the 10 yr study. Inorganic and organic contaminants were evaluated in ambient water and sediment concurrently with water column and sediment tests to assess possible causes of toxicity although absolute causality can not be established. Multivariate statistical analysis was used to develop a multiple endpoint toxicity index (TOX-INDEX) at each station for both water column and sediment toxicity data. Water column tests from the 10 yr testing period showed that 49% of the time, some degree of toxicity was reported. The most toxic sites based on water column results were located in urbanized areas such as the Anacostia River, Elizabeth River and the Middle River. Water quality criteria for copper, lead, mercury, nickel and zinc were exceeded at one or more of these sites. Water column toxicity was also reported in localized areas of the South and Chester Rivers. Both spatial and temporal variability was reported from the suite of water column toxicity tests. Some degree of sediment toxicity was reported from 62% of the tests conducted during the ten year period. The Elizabeth River and Baltimore Harbor stations were reported as the most toxic areas based on sediment results. Sediment toxicity guidelines were exceeded for one or more of the following metals at these two locations: arsenic, cadmium, chromium, copper, lead, nickel and zinc. At the Elizabeth River stations nine of sixteen semi-volatile organics and two of seven pesticides measured exceeded the ER-M values in 1990. Ambient sediment toxicity tests in the Elizabeth River in 1996 showed reduced toxicity. Various semi-volatile organics exceeded the ER-M values at a number of Baltimore Harbor sites; pyrene and dibenzo(a,h)anthracene were particularly high at one of the stations (Northwest Harbor). Localized sediment toxicity was also reported in the Chester, James, Magothy, Rappahannock, and Potomac Rivers but the link with contaminants was not determined. Both spatial and temporal variability was less for sediment toxicity data when compared with water column toxicity data. A comparison of water column and sediment toxicity data for the various stations over the 10 yr study showed that approximately half the time agreement occurred (either both suite of tests showed toxicity or neither suite of tests showed toxicity).

Water geochemistry of shallow lakes from the southeastern Pampa plain, Argentina and their implications on mollusk shells preservation.

PubMed

Cristini, Paula A; Tietze, Eleonor; De Francesco, Claudio G; Martínez, Daniel E

2017-12-15

A seasonal sampling of sediments, column and interstitial water for physico-chemical analysis were performed in littoral and open water areas in three freshwater shallow lakes (Nahuel Rucá, Las Mostazas and Los Carpinchos) from Southeastern Pampa plain, Argentina. The main objective of the present study is to evaluate how the characteristics of the depositional environments could be affecting mollusk shell preservation. These lakes are very shallow (2m) and are characterized by an extensive littoral area, dominated by the emergent macrophyte Schoenoplectus californicus, which forms a complete ring around the lake, and an open water area, in general free of vegetation. Five samples of sediments in each compartment were extracted for analysis of pH, moisture, organic matter and carbonates content using a gravity corer, while five samples from column and interstitial water were extracted for chemical analysis (pH, conductivity, major ions, minor ions and hardness). Besides, calcite and aragonite saturation indices and the redox potential were calculated for each lake. The results show the significant impact of water chemistry and redox conditions on the preservation potential of freshwater mollusk and consequently in the quality of paleonvironmental reconstruction based on the biological record from the study region. The higher concentration of organic matter and lower pH registered in the littoral area, mainly during warm months (autumn and summer), suggest worst environments for mollusk preservation, compared to open waters. Moreover, water geochemistry analysis showed aragonite and calcite indices near equilibrium or slightly subsaturated in interstitial water associated with more acid pHs, while column water is strongly oversaturated related to alkaline pHs. These results suggest that carbonate remains within sediments will be subject to dissolution affecting negatively their preservation potential. However, mollusk shells in contact with the column water are not expected to be dissolved. Copyright © 2017 Elsevier B.V. All rights reserved.

Contaminant loading to Puget Sound from two marinas. Puget Sound estuary program. Final report, June 1988-October 1988

DOE Office of Scientific and Technical Information (OSTI.GOV)

Crecelius, E.A.; Fortman, T.J.; Kiesser, S.L.

1989-07-01

Concentrations of Cu, Pb, Zn, PAH's, TBT and FC bacteria were measured in surface sediment, sediment-trap, and water-column samples at two marinas in Puget Sound during summer of 1988. Levels of contaminants inside the marinas were compared with levels outside. TBT had greatest elevation in marina sediments compared to reference sediments. Few of sediments exceeded Puget Sound AET sediment quality values but most did exceed PSDDA screening levels for in-water disposal of dredged sediment. All marinas estimated to contribute less than one percent of total mass loading of Cu, Pb and Zn to main basin of Puget Sound. Contribution ofmore » TBT may be much more significant if antifouling paints are the major source for Puget Sound.« less

Continuous automated sensing of streamflow density as a surrogate for suspended-sediment concentration sampling

USGS Publications Warehouse

Larsen, Matthew C.; Figueroa Alamo, Carlos; Gray, John R.; Fletcher, William

2001-01-01

A newly refined technique for continuously and automatically sensing the density of a water-sediment mixture is being tested at a U.S. Geological Survey streamflow-gaging station in Puerto Rico. Originally developed to measure crude oil density, the double bubbler instrument measures fluid density by means of pressure transducers at two elevations in a vertical water column. By subtracting the density of water from the value measured for the density of the water-sediment mixture, the concentration of suspended sediment can be estimated. Preliminary tests of the double bubbler instrument show promise but are not yet conclusive.

A modern framework for the interpretation of 238U/235U in studies of ancient ocean redox

NASA Astrophysics Data System (ADS)

Andersen, M. B.; Romaniello, S.; Vance, D.; Little, S. H.; Herdman, R.; Lyons, T. W.

2014-08-01

The abundance and isotope composition of redox sensitive elements in ancient sediments are increasingly used to understand the past ocean's geochemical state and the oxygenation history of the Earth. The redox transition of uranium (U) from soluble U+6 to relatively insoluble U+4 and its subsequent incorporation into reduced sediments has been used to deduce the redox state of the oceans in the past. Furthermore, recent analytical improvements have revealed significant 238U/235U fractionation during this redox transition, offering the potential for U isotopes to act as a redox proxy. However, the development of U isotopes as a geochemical tracer requires that U isotope systematics associated with redox changes, are well-characterized. This study focuses on U isotopes in recent sediments from the two largest modern anoxic ocean basins, the Black Sea and the Cariaco Basin, with the aim of advancing our understanding of the U isotope systematics in reducing marine environments. These anoxic sediments have high U accumulation rates and high 238U/235U ratios relative to seawater, in general agreement with a process that accumulates reduced U with a heavy isotopic composition. Using Al and Ca concentrations to correct for detrital and biogenic carbonate-bound U, we estimate the reduced authigenic U accumulated in the sediments and its 238U/235U. These results highlight the importance of isotopic mass balance constraints during diffusive transport and reaction of U from seawater and through pore-water, affecting the observed 238U/235U in sediments. Using these constraints, the average percentages of U depletion from top to bottom of the water column can be estimated, assuming batch-removal of U into anoxic sediments in a restricted basin. Using this framework, 238U/235U in modern anoxic sediments from the Black Sea imply U depletions in the water column of ∼30%, which is close to the observed ∼40% U depletion in the modern Black Sea water column at these depths. Similar U depletion in the water column is estimated from anoxic sediment samples of the Cariaco Basin. These recent anoxic sediments provide a basis for interpreting authigenic 238U/235U in ancient sediments. In particular, such analyses may offer insights, based on mass balance relationships, into whether particular ancient sediments were deposited in an open ocean or restricted basin. As such, this approach may provide key insight into the controls on local versus ocean-scale redox and, in that light, constraints the capacity of other proxies to capture global signals for anoxia/euxinia.

Microbial Community Composition, Functions, and Activities in the Gulf of Mexico 1 Year after the Deepwater Horizon Accident

PubMed Central

Yergeau, Etienne; Maynard, Christine; Sanschagrin, Sylvie; Champagne, Julie; Juck, David; Lee, Kenneth

2015-01-01

Several studies have assessed the effects of the released oil on microbes, either during or immediately after the Deepwater Horizon accident. However, little is known about the potential longer-term persistent effects on microbial communities and their functions. In this study, one water column station near the wellhead (3.78 km southwest of the wellhead), one water column reference station outside the affected area (37.77 km southeast of the wellhead), and deep-sea sediments near the wellhead (3.66 km southeast of the wellhead) were sampled 1 year after the capping of the well. In order to analyze microbial community composition, function, and activity, we used metagenomics, metatranscriptomics, and mineralization assays. Mineralization of hexadecane was significantly higher at the wellhead station at a depth of ∼1,200 m than at the reference station. Community composition based on taxonomical or functional data showed that the samples taken at a depth of ∼1,200 m were significantly more dissimilar between the stations than at other depths (surface, 100 m, 750 m, and >1,500 m). Both Bacteria and Archaea showed reduced activity at depths of ∼1,200 m when the wellhead station was compared to the reference station, and their activity was significantly higher in surficial sediments than in 10-cm sediments. Surficial sediments also harbored significantly different active genera than did 5- and 10-cm sediments. For the remaining microbial parameters assessed, no significant differences could be observed between the wellhead and reference stations and between surface and 5- to 10-cm-deep sediments. PMID:26092461

Controlling factors of harmful microalgae distribution in water column, biofilm and sediment in shellfish production area (South of Sfax, Gulf of Gabes) from southern Tunisia

NASA Astrophysics Data System (ADS)

Loukil-Baklouti, Amira; Feki-Sahnoun, Wafa; Hamza, Asma; Abdennadher, Moufida; Mahfoudhi, Mabrouka; Bouain, Abderrahmen; Jarboui, Othman

2018-01-01

The aim of this study was to investigate the spatio-temporal distribution of harmful microalgae coupled with environmental factors in the most important area for natural stocks of the grooved carpet shell Ruditapes decussatus in southern Tunisia. Sampling was performed monthly from May 2010 to April 2011 in five stations through the Tunisian National Monitoring Stations Network of Phytoplankton and Phycotoxins along the southern coasts of Sfax (Gulf of Gabes). The presence of harmful microalgae species was explored in three compartments: water column, biofilm and sediment. Our results revealed fourteen species were identified belonging to dinoflagellates and diatoms with higher densities during the summer period. The co-inertia plot analysis exhibited that the seasonal fluctuations of these species were controlled by the temperature as well as the nutrients (particularly nitrogenous). Ternary diagrams showed that biofilm was the most colonized compartment by toxic benthic dinoflagellates species, namely Amphidinium carterae, Prorocentrum rathymum, Prorocentrum concavum, Prorocentrum lima, Ostreopsis cf. ovata and Coolia monotis. In addition, these species were recorded simultaneously in the water column and the sediment, a fact that could be explained by the resuspension of these benthic dinoflagellates from the biofilm by hydrodynamics. The data suggest that harmful microalgae could be the source of toxins in the studied stations, which provide support to the implication of these results on the future sampling strategy of harmful microalgae in shellfish collecting areas in Tunisia.

Mercury methylation at mercury mines in the Humboldt River Basin, Nevada, USA

USGS Publications Warehouse

Gray, J.E.; Crock, J.G.; Lasorsa, B.K.

2002-01-01

Total Hg and methylmercury concentrations were measured in mine-waste calcines (retorted ore), sediment, and water samples collected in and around abandoned mercury mines in western Nevada to evaluate Hg methylation at the mines and in the Humboldt River Basin. Mine-waste calcines contain total Hg concentrations as high as 14 000 ??g g-1. Stream-sediment samples collected within 1 km of the mercury mines contain total Hg concentrations as high as 170 ??g g-1, whereas stream sediments collected at a distance >5 km from the mines, and those collected from the Humboldt River and regional baseline sites, contain total Hg concentrations 8 km from the nearest mercury mines. Our data indicate little transference of Hg and methylmercury from the sediment to the water column due to the lack of mine runoff in this desert climate.

Laboratory, Field, and Analytical Procedures for Using ...

EPA Pesticide Factsheets

Regardless of the remedial technology invoked to address contaminated sediments in the environment, there is a critical need to have tools for assessing the effectiveness of the remedy. In the past, these tools have included chemical and biomonitoring of the water column and sediments, toxicity testing and bioaccumulation studies performed on site sediments, and application of partitioning, transport and fate modeling. All of these tools served as lines of evidence for making informed environmental management decisions at contaminated sediment sites. In the last ten years, a new tool for assessing remedial effectiveness has gained a great deal of attention. Passive sampling offers a tool capable of measuring the freely dissolved concentration (Cfree) of legacy contaminants in water and sediments. In addition to assessing the effectiveness of the remedy, passive sampling can be applied for a variety of other contaminated sediments site purposes involved with performing the preliminary assessment and site inspection, conducting the remedial investigation and feasibility study, preparing the remedial design, and assessing the potential for contaminant bioaccumulation. While there is a distinct need for using passive sampling at contaminated sediments sites and several previous documents and research articles have discussed various aspects of passive sampling, there has not been definitive guidance on the laboratory, field and analytical procedures for using pas

Regression modeling of particle size distributions in urban storm water: advancements through improved sample collection methods

USGS Publications Warehouse

Fienen, Michael N.; Selbig, William R.

2012-01-01

A new sample collection system was developed to improve the representation of sediment entrained in urban storm water by integrating water quality samples from the entire water column. The depth-integrated sampler arm (DISA) was able to mitigate sediment stratification bias in storm water, thereby improving the characterization of suspended-sediment concentration and particle size distribution at three independent study locations. Use of the DISA decreased variability, which improved statistical regression to predict particle size distribution using surrogate environmental parameters, such as precipitation depth and intensity. The performance of this statistical modeling technique was compared to results using traditional fixed-point sampling methods and was found to perform better. When environmental parameters can be used to predict particle size distributions, environmental managers have more options when characterizing concentrations, loads, and particle size distributions in urban runoff.

Pushing open-ocean organic paleo-environmental proxies to the margin: Narragansett Bay, RI

NASA Astrophysics Data System (ADS)

Salacup, J. M.; Herbert, T.; Prell, W. L.

2010-12-01

Estuarine sediment deposits provide an under-utilized opportunity to reconstruct high-resolution records of environmental change from the highly sensitive intersection of oceanic and terrestrial systems. Previous applications of both well-established and novel organic geochemical proxies to estuaries have met with mixed success. Compared to oceanic settings, the large dynamic range of tidal currents, water temperature, salinity, nutrients, and productivity both enrich and complicate estuarine sedimentary records. Here, we present the results of monthly samples of water-column particulate organic matter and compare them to a suite of sediment cores in an effort to elucidate how the environmental signal produced in the water-column is translated to the sediment. Specifically, we measured alkenones and glycerol dialkyl glycerol tetraethers (GDGTs), the bases for the Uk’37 sea-surface temperature (SST) and C-37total primary productivity proxies, and the TEX86 SST and BIT Index proxies, respectively. Alkenones, produced by haptophyte algae, are present in most of our water-column samples; however, concentrations in many samples are too low to reliably calculate temperature. When reliable, water-column alkenones infer SSTs between 13-16°C, consistent with sediment core-top Uk’37 SST estimates. These correlate to May and Oct SSTs, coinciding with the terminations of the summer-fall and winter-spring algal blooms in Narragansett Bay. In contrast to alkenone fingerprints reported from the much lower salinity Chesapeake Bay, Narragansett Bay samples lack significant contributions of the C37:4 ketone, consistent with production by open-ocean haptophytes. Notably, sedimentary records of Uk’37-inferred SST show strong inter-core centennial-to-decadal coherence. The structure and absolute values of inferred SSTs correlate well with instrumental mean Sept-Oct air temperatures back to 1895, and contain structure consistent with the late Little Ice Age and 20th century warming. Our record indicates that the past 100 in Narragansett Bay are the warmest in at least the last 500. Water-column values of the GDGT-based BIT Index, a proxy for the delivery of terrestrial organic matter (TOM), decrease down-Bay with distance from the major rivers. However, absolute values of the index, exceeding 0.8-0.9 in the upper half of the Bay, are more consistent with soil samples than water and are hard to reconcile with high level of marine productivity. Sedimentary values of the BIT Index are also high, between ~0.4 and 0.8, and their profiles suggest that Colonization (~1700) and Industrialization (~1850) altered terrestrial sediment delivery to the Bay. Such high values of the BIT Index suggest the utility of TEX86 may be complicated by terrestrial GDGT contributions. Indeed, sedimentary values for TEX86 are highly variable and show little correlation with Uk’37 or instrumental records. Our results confirm the utility of organic geochemical proxies in estuarine settings while advocating the application of more than one. In Narragansett Bay, this approach has allowed the reconstruction of local historically and climatically important events such as the impacts of European settlement, the Industrial Revolution, and 20th century warming.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Steinen, R.; Tennet, P.

Fine-grained sediments present in Florida Bay, the inner reef tract of Florida, and the Great Bahama Bank are formed by three processes. The sediments differ primarily in the amount of 4-{mu}m-long aragonite needles that comprise the sediment, but also in the amount of aragonite. Florida Bay muds are composed primarily of equant 1 {mu}m grains; less than 20% are needles. The fine-grained fraction from the inner reef tract of Florida contains more aragonite needles than Florida Bay muds. Some samples contain nearly 90% needles, whereas samples, from adjacent localities contain only 50%. Sediment from both areas is deposited and mixedmore » by bioturbation on the deltas at tidal passes through the Florida Keys. The amount of needle sediment diminishes rapidly away from the tidal passes in Florida Bay. The fine-grained fraction on the Great Bahama Bank is dominated by 4-{mu}m-long needles of aragonite but may contain fragments and whole tests of foraminifers. In general, the more abundant the aragonite-needle content is in any of the sediment, the greater the aragonite content of that sediment. The three main processes responsible for mud production on the Florida-Bahama Platform are (1) disintegration of skeletal encrustations, mainly red algae and spirobid worm tubules, on Thalassia grass blades; (2) postmortem disaggregation of aragonite needles from green algae; and (3) direct precipitation of aragonite and Mg-calcite from supersaturated marine waters. Where sufficient nutrients exist in the water column, such as in Florida Bay, mud production is dominated by the epibionts on the Thalassia grass community. Less nutrients in the water column of the inner reef tract results in fewer encrustations.« less

SAMPLING STRATEGIES FOR ESTIMATING THE MAGNITUDE AND IMPORTANCE OF INTERNAL PHOSPHORUS SUPPLIES IN LAKES

EPA Science Inventory

The physical and chemical factors controlling sediment release and water column cycling of phosphorus and other nutrients (internal loading) are discussed within a 'systems' framework. Applying the systems approach, time-dependent nutrient storage within identified compartments, ...

Ecological evaluation of proposed dredged material from St. Andrew Bay, Florida

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mayhew, H.L.; Word, J.Q.; Kohn, N.P.

1993-10-01

The US Army Corps of Engineers (USACE), Mobile District, requested that the Battelle/Marine Sciences Laboratory (MSL) conduct field sampling and chemical and biological testing to determine the suitability of potential dredged material for open ocean disposal. Sediment from St. Andrew Bay was chemically characterized and evaluated for biological toxicity and bioaccumulation of contaminants. The Tier III guidance for ocean disposal testing requires tests of water column effects (following dredged material disposal), deposited sediment toxicity, and bioaccumulation of contaminants from deposited sediment (dredged material). To meet these requirements, the MSL conducted suspended-particulate-phase (SPP) toxicity tests, solid-phase toxicity tests, and bioaccumulation testingmore » on sediment representing potential dredged material from Panama City Harbor. Physical and chemical characterization of sediment to support toxicity and bioaccumulation results was also conducted on both the test and reference sediments. The MSL collected sediment samples from five sites in St. Andrew Bay and one reference site near Lands End Peninsula. The five test sediments and the reference sediment were analyzed for physical and chemical sediment characteristics, SPP chemical contaminants, solid-phase toxicity, SPP toxicity, and bioaccumulation of contaminants.« less

Sources and relative reactivities of amino acids, neutral sugars, and lignin in an intermittently anoxic marine environment

NASA Astrophysics Data System (ADS)

Cowie, Gregory L.; Hedges, John I.; Calvert, Stephen E.

1992-05-01

A sediment-trap sample, representing an annual average particle flux at 50 m in Saanich Inlet, British Columbia, was analyzed for its elemental, amino acid, neutral sugar, and lignin composition. Amino acid analyses also were performed on underlying sediments which were analyzed previously for organic carbon, nitrogen, neutral sugars, and lignin. The results uniformly indicate primarily marine organic matter sources for all samples, although relatively higher terrigenous contributions are evident in the sediments. The δ13C values of trap materials also point to primarily autochthonous particle fluxes. Comparison of annual average water-column fluxes to sediment accumulation rates indicates under-sampling of sinking particles due to lateral sediment inputs at depth. The anoxic benthic interface appears to be an important site of diagenesis, and selective removal is observed both at compound-class and molecular levels. Cinnamyl and syringyl phenols are selectively removed relative to vanillyl phenols and loss patterns of the monosaccharides, and to a lesser degree the amino acids, strongly indicate preferential preservation of diatom cell-wall materials. Low flux ratios displayed by the nonprotein amino acids are consistent with their diagenetic origin. Preferential loss of marine organic material is indicated by the calculated δ13C value and biochemical composition of the substrate. Concentrations of all measured organic constituents decreased with depth in the uniformly varved 0-14 cm sediment interval, and suggest in situ degradation. Relative reactivities of the biochemical classes indicate a change in diagenetic substrate from that utilized above and at the benthic interface. With the exception of the amino acids, however, diagenesis is generally less selective in the sediments. The amino acid utilization pattern differs from that observed across the benthic interface, and down-core changes in protein and nonprotein amino acid compositions clearly indicate in situ degradation. The sedimentary degraded fraction also appears to be predominantly marine, but lignin yields and sugar compositions suggest a relative increase in the utilization of vascular plant remains. Protein, polysaccharide, and lignin contributions to total organic carbon decrease from 37% in the sediment-trap sample to 22% at the bottom of the 0-14 cm sediment interval. These biochemicals represent over 40 and 50-60% of the degraded carbon and nitrogen, respectively, and thus are important nutrients for the benthic and water-column communities.

Determination of traces of palladium in stream sediment and auto catalyst by FI-ICP-OES using on-line separation and preconcentration with QuadraSil TA.

PubMed

Nakajima, Junichi; Ohno, Masashi; Chikama, Katsumi; Seki, Tatsuya; Oguma, Koichi

2009-09-15

A flow injection analysis (FIA) method using on-line separation and preconcentration with a novel metal scavenger beads, QuadraSil TA, has been developed for the ICP-OES determination of traces of palladium. QuadraSil TA contains diethylenetriamine as a functional group on spherical silica beads and shows the highest selectivity for Pd(II) at pH 1 (0.1 mol l(-1) hydrochloric acid) solution. An aliquot of the sample solution prepared as 0.1 mol l(-1) in hydrochloric acid was passed through the QuadraSil TA column. After washing the column with the carrier solution, the Pd(II) retained on the column was eluted with 0.05 mol l(-1) thiourea solution and the eluate was directly introduced into an ICP-OES. The proposed method was successfully applied to the determination of traces of palladium in JSd-2 stream sediment certified reference material [0.019+/-0.001 microg g(-1) (n=3); provisional value: 0.0212 microg g(-1)] and SRM 2556 used auto catalyst certified reference material [315+/-4 microg g(-1) (n=4); certified value: 326 microg g(-1)]. The detection limit (3 sigma) of 0.28 ng ml(-1) was obtained for 5 ml of sample solution. The sample through puts for 5 ml and 100 microl of the sample solutions were 10 and 15 h(-1), respectively.

Monitoring stream sediment loads in response to agriculture in Prince Edward Island, Canada.

PubMed

Alberto, Ashley; St-Hilaire, Andre; Courtenay, Simon C; van den Heuvel, Michael R

2016-07-01

Increased agricultural land use leads to accelerated erosion and deposition of fine sediment in surface water. Monitoring of suspended sediment yields has proven challenging due to the spatial and temporal variability of sediment loading. Reliable sediment yield calculations depend on accurate monitoring of these highly episodic sediment loading events. This study aims to quantify precipitation-induced loading of suspended sediments on Prince Edward Island, Canada. Turbidity is considered to be a reasonably accurate proxy for suspended sediment data. In this study, turbidity was used to monitor suspended sediment concentration (SSC) and was measured for 2 years (December 2012-2014) in three subwatersheds with varying degrees of agricultural land use ranging from 10 to 69 %. Comparison of three turbidity meter calibration methods, two using suspended streambed sediment and one using automated sampling during rainfall events, revealed that the use of SSC samples constructed from streambed sediment was not an accurate replacement for water column sampling during rainfall events for calibration. Different particle size distributions in the three rivers produced significant impacts on the calibration methods demonstrating the need for river-specific calibration. Rainfall-induced sediment loading was significantly greater in the most agriculturally impacted site only when the load per rainfall event was corrected for runoff volume (total flow minus baseflow), flow increase intensity (the slope between the start of a runoff event and the peak of the hydrograph), and season. Monitoring turbidity, in combination with sediment modeling, may offer the best option for management purposes.

Seasonal changes of mercury reduction and methylation in Gulf of Trieste (north Adriatic Sea)

NASA Astrophysics Data System (ADS)

Horvat, M.; Bratkic, A.; Koron, N.; Faganeli, J.; Ribeiro Guevara, S.; Tinta, T.

2014-12-01

We have successfully improved and applied the 197Hg radiotracer method during the sampling campaign from March until November 2011, collecting and incubating sediments and waters with low 197Hg2+ additions without significantly increasing natural levels. The evolution of Me197Hg and DGM197 was followed. In addition, we have performed Hg speciation of the water column and sediment, determined diversity of microbial community and investigated microbial resistance to Hg through presence of merA and merB genes. Our results showed repeatedly that methylation does not occur in the water column of the GoT, and confirmed that sediments are the principal methylation site, as well as the source of MeHg to the water column. Its formation seems to be closely linked to nutrient cycling at the sediment-water interface, where degradation of organic matter with accompanying oxygen consumption significantly stimulates MeHg production (range 0.85 pM - 3.39 pM). The water column showed a pronounced capability for 197Hg2+ reduction (up to 25% d-1), confirming that the GoT is a source of Hg to the atmosphere. Whether reduction was directly linked to genetic resistance; was a consequence of non-specific redox reactions or of other microbial mechanisms could not be demonstrated. Neither merA nor merB genes were detected, but the microbial community structure was changing in the water column seasonally, as did the reduction rates in the experiments. Most importantly, it was shown that 197Hg methodology is sensitive enough to follow Hg biogeochemical transformations at environmental levels. The advantage is that the minimal additions of 197Hg do not disturb the natural processes occurring in the environment and that very small changes can be detected. Hg stress in the Gulf can directly manifest itself in biota and consequently result in a threat to environmental and public health and therefore needs to be seen in the light of changing global climate and marine environment.

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria

PubMed Central

Russell, Joseph A.; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F.

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface. PMID:27242705

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria.

PubMed

Russell, Joseph A; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.

Rapid determination of molar mass in modified Archibald experiments using direct fitting of the Lamm equation.

PubMed

Schuck, P; Millar, D B

1998-05-15

A new method is described that allows measurement of the molar mass of the solute within 15 to 30 min after start of a conventional long-column sedimentation equilibrium experiment. A series of scans of the concentration distribution in close vicinity of the meniscus, taken in rapid succession after the start of the centrifuge run, is analyzed by direct fitting using the Lamm equation and the Svedberg equation. In case of a single solute, this analysis of the initial depletion at the meniscus reveals its buoyant molar mass and sedimentation coefficient with an accuracy of approximately 10% and provides gross information about sample heterogeneity. This method can be used to study macromolecules that do not possess the prolonged stability needed in conventional sedimentation equilibrium experiments and it can increase the efficiency of sedimentation equilibrium experiments of previously uncharacterized samples.

Estimation of Nutrients Flux of Water-sediment Interface in the Chukchi Sea, the Western Arctic Ocean

NASA Astrophysics Data System (ADS)

Zhang, H.

2016-02-01

Nutrients regeneration in pore water is one of the important ways to supply nutrients of upper water column in the shelf. The pore water in sediment of the central Chukchi Sea continental shelf, showed a typical benthic distribution of nutrients at water-sediment interface, in where physical and bioturbation was weak. The nutrient samples in multi-tubular short column sediment and water column were obtained from the Forth Chinese National Arctic Research Expedition, to measure the nutrient concentrations of pore water, overlying water and water column. The results show that, the typical distribution can be separated into three layers. The first layer is the exponential increasing layer (I), in which the concentrations of nutrients increased rapidly with depth. Then was the steady layer (II), the sediment demineralization was equal to the nutrient transference and nutrients' concentrations were substantially constant at this stage. The third layer was a slowly descending layer (III), in which NO3- and PO43- were reduced by bacteria and lost oxygen ions due to organic materials degradation depleting oxygen. By a two-layer mode and the Fick's first law of diffusion, diffusive fluxes of silicate, phosphate and nitrate in R06 station of the Chukchi Sea shelf can be calculated, and the fluxes were 1.660 mmol/(m2 · d), 0.008 mmol/(m2 · d) and 0.117 mmol/(m2 · d), respectively. The diffusive fluxes of silicate for CC1, R06, C07 and S23 stations were 3.101 mmol/(m2 · d), 1.660 mmol/(m2 · d), 1.307 mmol/(m2 · d) and mmol/(m2 · d), respectively, which show obvious distribution characteristics with latitude. Distribution of N * in the pore water suggested that a strong denitrification process in sedimentary environment of the Chukchi Sea shelf, which is an important sink for nitrate.

Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory : determination of organochlorine pesticides and polychlorinated biphenyls in bottom and suspended sediment by gas chromatography with electron-capture detection

USGS Publications Warehouse

Noriega, Mary C.; Wydoski, Duane S.; Foreman, William T.

2004-01-01

A method applicable for the determination of 19 organochlorine (OC) pesticides, including total toxaphene as a complex mixture, and 3 polychlorinated biphenyl (PCB) mixtures as Aroclor equivalents--Aroclor 1016/1242, 1254, and 1260--in soil, aquatic bottom sediment, and suspended sediment is described. Method performance data are presented. The solvent system is designed to extract simultaneously selected OC pesticides and PCBs from the same sample matrix. The compounds are extracted by conventional Soxhlet extraction with dichloromethane, followed by partial isolation using gel permeation chromatography (GPC) to remove inorganic sulfur and large naturally present molecules from the sediment extract. The aliquot of extract collected from the GPC for OCs (OC pesticides and PCBs) is split into two sample fractions by alumina/silica combined-column chromatography, followed by Florisil adsorption chromatography to remove interfering compounds in the second fraction. The OC fractions are analyzed by dual capillary-column gas chromatography with electron-capture detection (GC/ECD). This report is limited to the determination of selected OC pesticides and PCBs by GC/ECD using this method. Interim reporting levels (IRLs) have been set at 0.400 to 3.12 micrograms per kilogram for 18 individual OC pesticides, 200 micrograms per kilogram for toxaphene, and 4.04 to 4.68 micrograms per kilogram for the PCBs, based on a sample size of 25-gram equivalent dry weight. These reporting levels may change following additional determinations of method detection limits.

Role of sediment size and biostratinomy on the development of biofilms in recent avian vertebrate remains

NASA Astrophysics Data System (ADS)

Peterson, Joseph E.; Lenczewski, Melissa E.; Clawson, Steven R.; Warnock, Jonathan P.

2017-04-01

Microscopic soft tissues have been identified in fossil vertebrate remains collected from various lithologies. However, the diagenetic mechanisms to preserve such tissues have remained elusive. While previous studies have described infiltration of biofilms in Haversian and Volkmann’s canals, biostratinomic alteration (e.g., trampling), and iron derived from hemoglobin as playing roles in the preservation processes, the influence of sediment texture has not previously been investigated. This study uses a Kolmogorov Smirnov Goodness-of-Fit test to explore the influence of biostratinomic variability and burial media against the infiltration of biofilms in bone samples. Controlled columns of sediment with bone samples were used to simulate burial and subsequent groundwater flow. Sediments used in this study include clay-, silt-, and sand-sized particles modeled after various fluvial facies commonly associated with fossil vertebrates. Extant limb bone samples obtained from Gallus gallus domesticus (Domestic Chicken) buried in clay-rich sediment exhibit heavy biofilm infiltration, while bones buried in sands and silts exhibit moderate levels. Crushed bones exhibit significantly lower biofilm infiltration than whole bone samples. Strong interactions between biostratinomic alteration and sediment size are also identified with respect to biofilm development. Sediments modeling crevasse splay deposits exhibit considerable variability; whole-bone crevasse splay samples exhibit higher frequencies of high-level biofilm infiltration, and crushed-bone samples in modeled crevasse splay deposits display relatively high frequencies of low-level biofilm infiltration. These results suggest that sediment size, depositional setting, and biostratinomic condition play key roles in biofilm infiltration in vertebrate remains, and may influence soft tissue preservation in fossil vertebrates.

DETERMINING THE CAUSES OF ADVERSE EFFECTS IN NEAR COASTAL ECOSYSTEMS: FROM TOXICITY IDENTIFICATION EVALUATIONS TO WATERSHED DIAGNOTICS

EPA Science Inventory

Several approaches are available for evaluating adverse effects in near coastal ecosystems. These range from performing toxicity tests with individual organisms on water column and sediment samples to conducting macrofaunal compositional analyses on pelagic and benthic communiti...

Occurrence and origin of Escherichia coli in water and sediments at two public swimming beaches at Lake of the Ozarks State Park, Camden County, Missouri, 2011-13

USGS Publications Warehouse

Wilson, Jordan L.; Schumacher, John G.; Burken, Joel G.

2014-01-01

In the past several years, the Missouri Department of Natural Resources has closed two popular public beaches, Grand Glaize Beach and Public Beach 1, at Lake of the Ozarks State Park in Osage Beach, Missouri when monitoring results exceeded the established Escherichia coli (E. coli) standard. As a result of the beach closures, the U.S. Geological Survey and Missouri University of Science and Technology, in cooperation with the Missouri Department of Natural Resources, led an investigation into the occurrence and origins of E. coli at Grand Glaize Beach and Public Beach 1. The study included the collection of more than 1,300 water, sediment, and fecal source samples between August 2011 and February 2013 from the two beaches and vicinity. Spatial and temporal patterns of E. coli concentrations in water and sediments combined with measurements of environmental variables, beach-use patterns, and Missouri Department of Natural Resources water-tracing results were used to identify possible sources of E. coli contamination at the two beaches and to corroborate microbial source tracking (MST) sampling efforts. Results from a 2011 reconnaissance sampling indicate that water samples from Grand Glaize Beach cove contained significantly larger E. coli concentrations than adjacent coves and were largest at sites at the upper end of Grand Glaize Beach cove, indicating a probable local source of E. coli contamination within the upper end of the cove. Results from an intensive sampling effort during 2012 indicated that E. coli concentrations in water samples at Grand Glaize Beach cove were significantly larger in ankle-deep water than waist-deep water, trended downward during the recreational season, significantly increased with an increase in the total number of bathers at the beach, and were largest during the middle of the day. Concentrations of E. coli in nearshore sediment (sediment near the shoreline) at Grand Glaize Beach were significantly larger in foreshore samples (samples collected above the shoreline) than in samples collected in ankle-deep water below the shoreline, significantly larger in the left and middle areas of the beach than the right area, and substantially larger than similar studies at E. coli- contaminated beaches on Lake Erie in Ohio. Concentrations of E. coli in the water column also were significantly larger after resuspension of sediments. Results of MST indicate a predominance of waterfowl-associated markers in nearshore sediments at Grand Glaize Beach consistent with frequent observations of goose and vulture fecal matter in sediment, especially on the left and middle areas of the beach. The combination of spatial and temporal sampling and MST indicate that an important source of E. coli contamination at Grand Glaize Beach during 2012 was E. coli released into the water column by bathers resuspending E. coli-contaminated sediments, especially during high-use days early in the recreational season.

Evaluation and use of a diffusion-controlled sampler for determining chemical and dissolved oxygen gradients at the sediment-water interface

USGS Publications Warehouse

Simon, N.S.; Kennedy, M.M.; Massoni, C.S.

1985-01-01

Field and laboratory evaluations were made of a simple, inexpensive diffusion-controlled sampler with ports on two sides at each interval which incorporates 0.2-??m polycarbonate membrane to filter samples in situ. Monovalent and divalent ions reached 90% of equilibrium between sampler contents and the external solution within 3 and 6 hours, respectively. Sediment interstitial water chemical gradients to depths of tens of centimeters were obtained within several days after placement. Gradients were consistent with those determined from interstitial water obtained by centrifugation of adjacent sediment. Ten milliliter sample volumes were collected at 1-cm intervals to determine chemical gradients and dissolved oxygen profiles at depth and at the interface between the sediment and water column. The flux of dissolved species, including oxygen, across the sediment-water interface can be assessed more accurately using this sampler than by using data collected from benthic cores. ?? 1985 Dr W. Junk Publishers.

Assessment of pathogenic bacteria in water and sediment from a water reservoir under tropical conditions (Lake Ma Vallée), Kinshasa Democratic Republic of Congo.

PubMed

Mwanamoki, Paola M; Devarajan, Naresh; Thevenon, Florian; Atibu, Emmanuel K; Tshibanda, Joseph B; Ngelinkoto, Patience; Mpiana, Pius T; Prabakar, Kandasamy; Mubedi, Josué I; Kabele, Christophe G; Wildi, Walter; Poté, John

2014-10-01

This study was conducted to assess potential human health risks presented by pathogenic bacteria in a protected multi-use lake-reservoir (Lake Ma Vallée) located in west of Kinshasa, Democratic Republic of Congo (DRC). Water and surface sediments from several points of the Lake were collected during summer. Microbial analysis was performed for Escherichia coli, Enterococcus (ENT), Pseudomonas species and heterotrophic plate counts. PCR amplification was performed for the confirmation of E. coli, ENT, Pseudomonas spp. and Pseudomonas aeruginosa isolated from samples. The results reveal low concentration of bacteria in water column of the lake, the bacterial quantification results observed in this study for the water column were below the recommended limits, according to WHO and the European Directive 2006/7/CE, for bathing water. However, high concentration of bacteria was observed in the sediment samples; the values of 2.65 × 10(3), 6.35 × 10(3), 3.27 × 10(3) and 3.60 × 10(8) CFU g(-1) of dry sediment for E. coli, ENT, Pseudomonas spp. and heterotrophic plate counts, respectively. The results of this study indicate that sediments of the Lake Ma Vallée can constitute a reservoir of pathogenic microorganisms which can persist in the lake. Possible resuspension of faecal indicator bacteria and pathogens would affect water quality and may increase health risks to the population during recreational activities. Our results indicate that the microbial sediment analysis provides complementary and important information for assessing sanitary quality of surface water under tropical conditions.

Microbial Community Composition, Functions, and Activities in the Gulf of Mexico 1 Year after the Deepwater Horizon Accident.

PubMed

Yergeau, Etienne; Maynard, Christine; Sanschagrin, Sylvie; Champagne, Julie; Juck, David; Lee, Kenneth; Greer, Charles W

2015-09-01

Several studies have assessed the effects of the released oil on microbes, either during or immediately after the Deepwater Horizon accident. However, little is known about the potential longer-term persistent effects on microbial communities and their functions. In this study, one water column station near the wellhead (3.78 km southwest of the wellhead), one water column reference station outside the affected area (37.77 km southeast of the wellhead), and deep-sea sediments near the wellhead (3.66 km southeast of the wellhead) were sampled 1 year after the capping of the well. In order to analyze microbial community composition, function, and activity, we used metagenomics, metatranscriptomics, and mineralization assays. Mineralization of hexadecane was significantly higher at the wellhead station at a depth of ∼1,200 m than at the reference station. Community composition based on taxonomical or functional data showed that the samples taken at a depth of ∼1,200 m were significantly more dissimilar between the stations than at other depths (surface, 100 m, 750 m, and >1,500 m). Both Bacteria and Archaea showed reduced activity at depths of ∼1,200 m when the wellhead station was compared to the reference station, and their activity was significantly higher in surficial sediments than in 10-cm sediments. Surficial sediments also harbored significantly different active genera than did 5- and 10-cm sediments. For the remaining microbial parameters assessed, no significant differences could be observed between the wellhead and reference stations and between surface and 5- to 10-cm-deep sediments. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

News from the "blowout", a man-made methane pockmark in the North Sea: chemosynthetic communities and microbial methane oxidation

NASA Astrophysics Data System (ADS)

Steinle, Lea I.; Wilfert, Philipp; Schmidt, Mark; Bryant, Lee; Haeckel, Matthias; Lehmann, Moritz F.; Linke, Peter; Sommer, Stefan; Treude, Tina; Niemann, Helge

2013-04-01

The accidental penetration of a base-Quaternary shallow gas pocket by a drilling rig in 1990 caused a "blowout" in the British sector of the North Sea (57°55.29' N, 01°37.86' E). Large quantities of methane have been seeping out of this man-made pockmark ever since. As the onset of gas seepage is well constrained, this site can be used as a natural laboratory to gain information on the development of methane oxidizing microbial communities at cold seeps. During an expedition with the R/V Celtic Explorer in July and August 2012, we collected sediments by video-guided push-coring with an ROV (Kiel 6000) along a gradient from inside the crater (close to where a jet of methane bubbles enters the water column) outwards. We also sampled the water column in a grid above the blowout at three different depths. In this presentation, we provide evidence for the establishment of methanotrophic communities in the sediment (AOM communities) on a time scale of decades. Furthermore, we will report data on methane concentrations and anaerobic methane oxidation rates in the sediment. Finally, we will also discuss the spatial distribution of methane and aerobic methane oxidation rates in the water column.

Environmental controls on the speciation and distribution of mercury in surface sediments of a tropical estuary, India.

PubMed

Chakraborty, Parthasarathi; Babu, P V Raghunadh

2015-06-15

Distribution and speciation of mercury (Hg) in the sediments from a tropical estuary (Godavari estuary) was influenced by the changing physico-chemical parameters of the overlying water column. The sediments from the upstream and downstream of the estuary were uncontaminated but the sediments from the middle of the estuary were contaminated by Hg. The concentrations of Hg became considerably less during the monsoon and post monsoon period. Total Hg concentrations and its speciation (at the middle of the estuary) were dependent on the salinity of the overlying water column. However, salinity had little or no effect on Hg association with organic phases in the sediments at downstream. Increasing pH of the overlying water column corresponded with an increase in the total Hg content in the sediments. Total organic carbon in the sediments played an important role in controlling Hg partitioning in the system. Uncomplexed Hg binding ligands were available in the sediments. Copyright © 2015 Elsevier Ltd. All rights reserved.

Quantifying the seasonal variations in fluvial and eolian sources of terrigenous material to Cariaco Basin, Venezuela

NASA Astrophysics Data System (ADS)

Elmore, Aurora C.; Thunell, Robert C.; Styles, Richard; Black, David; Murray, Richard W.; Martinez, Nahysa; Astor, Yrene

2009-02-01

The varved sediments that accumulate in the Cariaco Basin provide a detailed archive of the region's climatic history, including a record of the quantity of fluvial and wind-transported material. In this study, we examine the sedimentological characteristics (clay mineralogy and grain size) of both surface sediments and sinking lithogenic material collected from sediment trap samples over a three-year period from 1997 to 2000. Data from biweekly sediment trap samples show a tri-modal particle size distribution, with prominent peaks at 2, 22 and 80 μm, indicating sediment contributions from both eolian and fluvial sources. The clay mineralogy of the water column samples collected from 1997 to 1999 also shows distinctive characteristics of eolian and fluvial material. An examination of surface sediment samples from the Cariaco Basin indicates that the Unare River is the main source of riverine sediments to the eastern sub-basin. By combining these sedimentological proxies, we estimate that ˜10% of the terrigenous material delivered to the Cariaco Basin is eolian, while ˜90% is fluvial. This represents an annual dust accumulation rate of ˜0.59 mg/cm 2/yr. Since aerosols are closely linked to climate variability, the ability to quantify paleo-dust fluxes using sedimentological characteristics will be a useful tool for future paleoclimate studies looking at sub-Saharan aridity and latitudinal migration of the Intertropical Convergence Zone.

Widespread Anthropogenic Nitrogen in Northwestern Pacific Ocean Sediment.

PubMed

Kim, Haryun; Lee, Kitack; Lim, Dhong-Il; Nam, Seung-Il; Kim, Tae-Wook; Yang, Jin-Yu T; Ko, Young Ho; Shin, Kyung-Hoon; Lee, Eunil

2017-06-06

Sediment samples from the East China and Yellow seas collected adjacent to continental China were found to have lower δ 15 N values (expressed as δ 15 N = [ 15 N: 14 N sample / 15 N: 14 N air - 1] × 1000‰; the sediment 15 N: 14 N ratio relative to the air nitrogen 15 N: 14 N ratio). In contrast, the Arctic sediments from the Chukchi Sea, the sampling region furthest from China, showed higher δ 15 N values (2-3‰ higher than those representing the East China and the Yellow sea sediments). Across the sites sampled, the levels of sediment δ 15 N increased with increasing distance from China, which is broadly consistent with the decreasing influence of anthropogenic nitrogen (N ANTH ) resulting from fossil fuel combustion and fertilizer use. We concluded that, of several processes, the input of N ANTH appears to be emerging as a new driver of change in the sediment δ 15 N value in marginal seas adjacent to China. The present results indicate that the effect of N ANTH has extended beyond the ocean water column into the deep sedimentary environment, presumably via biological assimilation of N ANTH followed by deposition. Further, the findings indicate that N ANTH is taking over from the conventional paradigm of nitrate flux from nitrate-rich deep water as the primary driver of biological export production in this region of the Pacific Ocean.

Calculating the diffusive flux of persistent organic pollutants between sediments and the water column on the Palos Verdes shelf superfund site using polymeric passive samplers.

PubMed

Fernandez, Loretta A; Lao, Wenjian; Maruya, Keith A; Burgess, Robert M

2014-04-01

Passive samplers were deployed to the seafloor at a marine Superfund site on the Palos Verdes Shelf, California, USA, and used to determine water concentrations of persistent organic pollutants (POPs) in the surface sediments and near-bottom water. A model of Fickian diffusion across a thin water boundary layer at the sediment-water interface was used to calculate flux of contaminants due to molecular diffusion. Concentrations at four stations were used to calculate the flux of DDE, DDD, DDMU, and selected PCB congeners from sediments to the water column. Three passive sampling materials were compared: PE strips, POM strips, and SPME fibers. Performance reference compounds (PRCs) were used with PE and POM to correct for incomplete equilibration, and the resulting POP concentrations, determined by each material, agreed within 1 order of magnitude. SPME fibers, without PRC corrections, produced values that were generally much lower (1 to 2 orders of magnitude) than those measured using PE and POM, indicating that SPME may not have been fully equilibrated with waters being sampled. In addition, diffusive fluxes measured using PE strips at stations outside of a pilot remedial sand cap area were similar to those measured at a station inside the capped area: 240 to 260 ng cm(-2) y(-1) for p,p'-DDE. The largest diffusive fluxes of POPs were calculated at station 8C, the site where the highest sediment concentrations have been measured in the past, 1100 ng cm(-2) y(-1) for p,p'-DDE.

Bubble Shuttle: A newly discovered transport mechanism, which transfers microorganisms from the sediment into the water column

NASA Astrophysics Data System (ADS)

Schmale, O.; Stolle, C.; Leifer, I.; Schneider von Deimling, J.; Kiesslich, K.; Krause, S.; Frahm, A.; Treude, T.

2013-12-01

The diversity and abundance of methanotrophic microorganisms is well studied in the aquatic environment, indicating their importance in biogeochemical cycling of methane in the sediment and the water column. However, whether methanotrophs are distinct populations in these habitats or are exchanged between benthic and pelagic environments, remains an open question. Therefore, field studies were conducted at the 'Rostocker Seep' site (Coal Oil Point seep area, California, USA) to test our hypothesis that methane-oxidizing microorganisms can be transported by gas bubbles from the sediment into the water column. The natural methane emanating location 'Rostocker Seep' showed a strong surface water oversaturation in methane with respect to the atmospheric equilibrium. Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (CARD-FISH) analyzes were performed to determine the abundance of aerobic and anaerobic methanotrophic microorganisms. Aerobic methane oxidizing bacteria were detected in the sediment and the water column, whereas anaerobic methanotrophs were detected exclusively in the sediment. The key device of the project was the newly developed "Bubble Catcher" used to collect naturally emanating gas bubbles at the sea floor together with particles attached to the bubble surface rim. Bubble Catcher experiments were carried out directly above a natural bubble release spot and on a reference site at which artificially released gas bubbles were caught, which had no contact with the sediment. CARD-FISH analyzes showed that aerobic methane oxidizing bacteria were transported by gas bubbles from the sediment into the water column. In contrast anaerobic methanotrophs were not detected in the bubble catcher. Further results indicate that this newly discovered Bubble Shuttle transport mechanism might influence the distribution pattern of methanotrophic microorganisms in the water column and even at the air-sea interface. Methane seep areas are often characterized by an elevated abundance of methane-oxidizing microorganisms, which consume a considerable amount of methane before it escapes into the atmosphere. Based on our study we hypothesize that the Bubble Shuttle transport mechanism contributes to this pelagic methane sink by a sediment-water column transfer of methane oxidizing microorganisms. Furthermore, this Bubble Shuttle may influence the methanotrophic community in the water column after massive short-term submarine inputs of methane (e.g. release of methane from bore holes). Especially in deep-sea regions, where the abundance of methane oxidizing microorganisms in the water column is low in general, Bubble Shuttle may inject a relevant amount of methane oxidizing microorganisms into the water column during massive inputs, supporting indirectly the turnover of this greenhouse active trace gas in the submarine environment.

Primary production export flux in Marguerite Bay (Antarctic Peninsula): Linking upper water-column production to sediment trap flux

NASA Astrophysics Data System (ADS)

Weston, Keith; Jickells, Timothy D.; Carson, Damien S.; Clarke, Andrew; Meredith, Michael P.; Brandon, Mark A.; Wallace, Margaret I.; Ussher, Simon J.; Hendry, Katharine R.

2013-05-01

A study was carried out to assess primary production and associated export flux in the coastal waters of the western Antarctic Peninsula at an oceanographic time-series site. New, i.e., exportable, primary production in the upper water-column was estimated in two ways; by nutrient deficit measurements, and by primary production rate measurements using separate 14C-labelled radioisotope and 15N-labelled stable isotope uptake incubations. The resulting average annual exportable primary production estimates at the time-series site from nutrient deficit and primary production rates were 13 and 16 mol C m-2, respectively. Regenerated primary production was measured using 15N-labelled ammonium and urea uptake, and was low throughout the sampling period. The exportable primary production measurements were compared with sediment trap flux measurements from 2 locations; the time-series site and at a site 40 km away in deeper water. Results showed ˜1% of the upper mixed layer exportable primary production was exported to traps at 200 m depth at the time-series site (total water column depth 520 m). The maximum particle flux rate to sediment traps at the deeper offshore site (total water column depth 820 m) was lower than the flux at the coastal time-series site. Flux of particulate organic carbon was similar throughout the spring-summer high flux period for both sites. Remineralisation of particulate organic matter predominantly occurred in the upper water-column (<200 m depth), with minimal remineralisation below 200 m, at both sites. This highly productive region on the Western Antarctic Peninsula is therefore best characterised as 'high recycling, low export'.

Salmon as drivers of physical and biological disturbance in river channels

NASA Astrophysics Data System (ADS)

Albers, S. J.; Petticrew, E. L.

2012-04-01

Large migrations across landscapes and ecosystem boundaries combined with disturbances of riverine spawning habitats through nest construction indicate the huge potential that Pacific salmon (Onchorhynchus sp.) have to disturb and alter regional energy flow. Nutrients derived from ocean-reared dead and decaying salmon are released into surrounding aquatic ecosystems fertilizing the water column, recently disturbed by increased suspended sediments due to nest construction. These opposing forces of disturbance and fertilization on spawning habitat have been demonstrated to impact local geomorphic and ecological cycles within salmon streams. An often cited, yet not fully tested, hypothesis is that this pulse of nutrients provided by decaying salmon can shift freshwater habitats to higher production levels. This hypothesis, however, remains contested and uncertain. Fine sediments are increasingly being recognized as important delivery and storage vectors for marine-derived nutrients (MDNs) in spawning streams. The temporal and spatial significance of these sediment vectors on gravelbed storage of MDN have not been quantified thereby restricting our ability to estimate the impact of gravelbed storage of MDNs on the riverine habitats. The objectives of this study were to i) quantify the magnitude of sediment deposition and retention in an active spawning area and ii) determine the contribution of MDN associated with the fine sediment storage. The Horsefly River spawning channel (HFC), an artificial salmon stock enhancement stream, was used to examine the biogeomorphic impacts of salmon spawning. We organized the HFC in an upstream-downstream paired treatment approach where the upstream enclosure was kept free of salmon and the downstream enclosure was loaded with actively spawning salmon. We used the difference in suspended sediment concentration between the salmon enclosure and the control enclosure to determine the contribution of salmon nest construction to suspended sediment concentration. To monitor sediment infiltration into the gravelbed we used modified infiltration bag samplers. Lastly, to examine the contribution of salmon nutrients to the infiltrated sediment we sampled for the presence of a marine isotope signature (15N) in the sediment. Increased sediment in the water column of the salmon enclosure during the active spawn period indicated salmon-mediated sediment resuspension. A gravelbed response to this water column disturbance was detected via increased sediment infiltration during salmon spawning. This stored sediment was enriched in organic matter and 15N indicating a marine salmon signal. Significant relationships between sediment infiltration and salmon enrichment provided further evidence that salmon organic matter, using resuspended sediment as a vector, was infiltrating into the gravelbed. During the post-spawn period organic sediment was elevated in the water column and gravelbed infiltration was reduced reflecting respectively, the release of decay products from salmon carcasses and MDN release from temporary gravelbed storage. This study demonstrated that localized patterns of sediment deposition are regulated by salmon activity, which control gravelbed MDN storage and release. Salmon-mediated, sediment vector influences on riverine habitat have been quantified here on a small experimental scale, but we expect that the effect is replicated and magnified, as it occurs regionally throughout the spawning grounds, with significant ecosystem implications.

Concentrations of Elements in Sediments and Selective Fractions of Sediments, and in Natural Waters in Contact with Sediments from Lake Roosevelt, Washington, September 2004

USGS Publications Warehouse

Paulson, Anthony J.; Wagner, Richard J.; Sanzolone, Richard F.; Cox, Steven E.

2006-01-01

Twenty-eight composite and replicate sediment samples from 8 Lake Roosevelt sites were collected and analyzed for 10 alkali and alkaline earth elements, 2 non-metals, 20 metals, and 4 lanthanide and actinide elements. All elements were detected in all sediment samples except for silver (95 percent of the elements detected for 1,008 analyses), which was detected only in 4 samples. Sequential selective extraction procedures were performed on single composite samples from the eight sites. The percentage of detections for the 31 elements analyzed ranged from 76 percent for the first extraction fraction using a weak extractant to 93 percent for the four-acid dissolution of the sediments remaining after the third sequential selective extraction. Water samples in various degrees of contact with the sediment were analyzed for 10 alkali and alkaline earth elements, 5 non-metals, 25 metals, and 16 lanthanide and actinide elements. The filtered water samples included 10 samples from the reservoir water column at 8 sites, 32 samples of porewater, 55 samples from reservoir water overlying sediments in 8 cores from the site incubated in a field laboratory, and 24 water samples that were filtered after being tumbled with sediments from 8 sites. Overall, the concentrations of only 37 percent of the 6,776 analyses of the 121 water samples were greater than the reporting limit. Selenium, bismuth, chromium, niobium, silver, and zirconium were not detected in any water samples. The percentage of concentrations for the water samples that were above the reporting limit ranged from 14 percent for the lanthanide and actinide elements to 77 percent for the alkali and alkaline earth elements. Concentrations were greater than reporting limits in only 23 percent of the analyses of reservoir water and 29 percent of the analyses of reservoir water overlying incubation cores. In contrast, 47 and 48 percent of the concentrations of porewater and water samples tumbled with sediments, respectively, were greater than the reporting limit.

A comparison of solids collected in sediment traps and automated water samplers

USGS Publications Warehouse

Bartsch, L.A.; Rada, R.G.; Sullivan, J.F.

1996-01-01

Sediment traps are being used in some pollution monitoring programs in the USA to sample suspended solids for contaminant analyses. This monitoring approach assumes that the characteristics of solids obtained in sediment traps are the same as those collected in whole-water sampling devices. We tested this assumption in the upper Mississippi River, based on the inorganic particle-size distribution (determined with a laser particle- analyzer) and volatile matter content of solids (a surrogate for organic matter). Cylindrical sediment traps (aspect ratio 3) were attached to a rigid mooring device and deployed in a flowing side channel in Navigation Pool 7 of the upper Mississippi River. On each side of the mooring device, a trap was situated adjacent to a port of an autosampler that collected raw water samples hourly to form 2-d composite samples. Paired samples (one trap and one raw water, composite sample) were removed from each end of the mooring device at 2-d intervals during the 30-d study period and compared. The relative particle collection efficiency of paired samplers did not vary temporally. Particle-size distributions of inorganic solids from sediment traps and water samples were not significantly different. The volatile matter content of solids was lesser in sediment traps (mean, 9.5%) than in corresponding water samples (mean, 22.7%). This bias may have been partly due to under-collection of phytoplankton (mainly cyanobacteria), which were abundant in the water column during the study. The positioning of water samplers and sediment traps in the mooring device did not influence the particle-size distribution or total solids of samples. We observed a small difference in the amount of organic matter collected by water samplers situated at opposite ends of the mooring device.

Unraveling signatures of biogeochemical processes and the depositional setting in the molecular composition of pore water DOM across different marine environments

NASA Astrophysics Data System (ADS)

Schmidt, Frauke; Koch, Boris P.; Goldhammer, Tobias; Elvert, Marcus; Witt, Matthias; Lin, Yu-Shih; Wendt, Jenny; Zabel, Matthias; Heuer, Verena B.; Hinrichs, Kai-Uwe

2017-06-01

Dissolved organic matter (DOM) in marine sediment pore waters derives largely from decomposition of particulate organic matter and its composition is influenced by various biogeochemical and oceanographic processes in yet undetermined ways. Here, we determine the molecular inventory of pore water DOM in marine sediments of contrasting depositional regimes with ultrahigh-resolution mass spectrometry and complementary bulk chemical analyses in order to elucidate the factors that shape DOM composition. Our sample sets from the Mediterranean, Marmara and Black Seas covered different sediment depths, ages and a range of marine environments with different (i) organic matter sources, (ii) balances of organic matter production and preservation, and (iii) geochemical conditions in sediment and water column including anoxic, sulfidic and hypersaline conditions. Pore water DOM had a higher molecular formula richness than overlying water with up to 11,295 vs. 2114 different molecular formulas in the mass range of 299-600 Da and covered a broader range of element ratios (H/C = 0.35-2.19, O/C = 0.03-1.19 vs. H/C = 0.56-2.13, O/C = 0.15-1.14). Formula richness was independent of concentrations of DOC and TOC. Near-surface pore water DOM was more similar to water column DOM than to deep pore water DOM from the same core with respect to formula richness and the molecular composition, suggesting exchange at the sediment-water interface. The DOM composition in the deeper sediments was controlled by organic matter source, selective decomposition of specific DOM fractions and early diagenetic molecule transformations. Compounds in pelagic sediment pore waters were predominantly highly unsaturated and N-bearing formulas, whereas oxygen-rich CHO-formulas and aromatic compounds were more abundant in pore water DOM from terrigenous sediments. The increase of S-bearing molecular formulas in the water column and pore waters of the Black Sea and the Mediterranean Discovery Basin was consistent with elevated HS- concentrations reflecting the incorporation of sulfur into biomolecules during early diagenesis. Sulfurization resulted in an increased average molecular mass of DOM and higher formula richness (up to 5899 formulas per sample). In sediments from the methanogenic zone in the Black Sea, the DOM pool was distinctly more reduced than overlying sediments from the sulfate-reducing zone. Bottom and pore water DOM from the Discovery Basin contained the highest abundances of aliphatic compounds in the entire dataset; a large fraction of abundant N-bearing formulas possibly represented peptide and nucleotide formulas suggesting preservation of these molecules in the life inhibiting environment of the Discovery Basin. Our unique data set provides the basis for a comprehensive understanding of the molecular signatures in pore water DOM and the turnover of sedimentary organic matter in marine sediments.

Ciliated protists from the nepheloid layer and water column of sites affected by the Deepwater Horizon oil spill in the Northeastern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Moss, Joseph A.; McCurry, Chelsea; Tominack, Sarah; Romero, Isabel C.; Hollander, David; Jeffrey, Wade H.; Snyder, Richard A.

2015-12-01

Benthic marine protists have been well documented from shallow marine benthic habitats but remain understudied in deeper habitats on continental shelves and slopes, particularly in the Northeastern Gulf of Mexico (NEGOM). This region was affected by a deep water oil well failure (BP-Deepwater Horizon, 2010). The combination of a lack of information on deep sea microbenthic communities and the potential for benthic microbial petroleum mineralization prompted this investigation. Water column and nepheloid layer samples were obtained via Niskin bottles and a multicorer respectively at stations across the NEGOM to: (1) determine whether nepheloid and water column communities are distinct and (2) assess benthic species richness relative to sediment PAH contamination. Phylum specific 18S rRNA gene amplification was used to construct clone libraries of ciliate assemblages. BLAST searches in the NCBI database indicated that a majority (~75%) of the clone sequences corresponded (94-100% similarity) with listed, yet unclassified sequences. Several putative species were common at most site locations and depths. Many known benthic ciliates, such as Uronychia transfuga, Uronychia setigera, and Spirotrachelostyla tani, were common in the nepheloid layer samples and not recovered in water column samples. Ciliated protist species richness increased with PAH levels found in surface sediments, suggesting a positive microbial response to petroleum enrichment of the benthos. The presence of previously unknown microbenthic communites in the nephaloid layer over oceanic clay-silt muds alters our view of microbial processes in the deep sea and merits investigation of the microbial processes and rates of microbial mineralization and biomass production important to global biogeochemistry.

Diversity of active aerobic methanotrophs along depth profiles of arctic and subarctic lake water column and sediments

PubMed Central

He, Ruo; Wooller, Matthew J; Pohlman, John W; Quensen, John; Tiedje, James M; Leigh, Mary Beth

2012-01-01

Methane (CH4) emitted from high-latitude lakes accounts for 2–6% of the global atmospheric CH4 budget. Methanotrophs in lake sediments and water columns mitigate the amount of CH4 that enters the atmosphere, yet their identity and activity in arctic and subarctic lakes are poorly understood. We used stable isotope probing (SIP), quantitative PCR (Q-PCR), pyrosequencing and enrichment cultures to determine the identity and diversity of active aerobic methanotrophs in the water columns and sediments (0–25 cm) from an arctic tundra lake (Lake Qalluuraq) on the north slope of Alaska and a subarctic taiga lake (Lake Killarney) in Alaska's interior. The water column CH4 oxidation potential for these shallow (∼2 m deep) lakes was greatest in hypoxic bottom water from the subarctic lake. The type II methanotroph, Methylocystis, was prevalent in enrichment cultures of planktonic methanotrophs from the water columns. In the sediments, type I methanotrophs (Methylobacter, Methylosoma and Methylomonas) at the sediment-water interface (0–1 cm) were most active in assimilating CH4, whereas the type I methanotroph Methylobacter and/or type II methanotroph Methylocystis contributed substantially to carbon acquisition in the deeper (15–20 cm) sediments. In addition to methanotrophs, an unexpectedly high abundance of methylotrophs also actively utilized CH4-derived carbon. This study provides new insight into the identity and activity of methanotrophs in the sediments and water from high-latitude lakes. PMID:22592821

Diversity of active aerobic methanotrophs along depth profiles of arctic and subarctic lake water column and sediments

USGS Publications Warehouse

He, Ruo; Wooller, Matthew J.; Pohlman, John W.; Quensen, John; Tiedje, James M.; Leigh, Mary Beth

2012-01-01

Methane (CH4) emitted from high-latitude lakes accounts for 2–6% of the global atmospheric CH4 budget. Methanotrophs in lake sediments and water columns mitigate the amount of CH4 that enters the atmosphere, yet their identity and activity in arctic and subarctic lakes are poorly understood. We used stable isotope probing (SIP), quantitative PCR (Q-PCR), pyrosequencing and enrichment cultures to determine the identity and diversity of active aerobic methanotrophs in the water columns and sediments (0–25 cm) from an arctic tundra lake (Lake Qalluuraq) on the north slope of Alaska and a subarctic taiga lake (Lake Killarney) in Alaska's interior. The water column CH4 oxidation potential for these shallow (~2m deep) lakes was greatest in hypoxic bottom water from the subarctic lake. The type II methanotroph, Methylocystis, was prevalent in enrichment cultures of planktonic methanotrophs from the water columns. In the sediments, type I methanotrophs (Methylobacter, Methylosoma and Methylomonas) at the sediment-water interface (0–1 cm) were most active in assimilating CH4, whereas the type I methanotroph Methylobacter and/or type II methanotroph Methylocystis contributed substantially to carbon acquisition in the deeper (15–20 cm) sediments. In addition to methanotrophs, an unexpectedly high abundance of methylotrophs also actively utilized CH4-derived carbon. This study provides new insight into the identity and activity of methanotrophs in the sediments and water from high-latitude lakes.

Determination of Wastewater Compounds in Sediment and Soil by Pressurized Solvent Extraction, Solid-Phase Extraction, and Capillary-Column Gas Chromatography/Mass Spectrometry

USGS Publications Warehouse

Burkhardt, Mark R.; Zaugg, Steven D.; Smith, Steven G.; ReVello, Rhiannon C.

2006-01-01

A method for the determination of 61 compounds in environmental sediment and soil samples is described. The method was developed in response to increasing concern over the effects of endocrine-disrupting chemicals in wastewater and wastewater-impacted sediment on aquatic organisms. This method also may be used to evaluate the effects of combined sanitary and storm-sewer overflow on the water and sediment quality of urban streams. Method development focused on the determination of compounds that were chosen on the basis of their endocrine-disrupting potential or toxicity. These compounds include the alkylphenol ethoxylate nonionic surfactants and their degradates, food additives, fragrances, antioxidants, flame retardants, plasticizers, industrial solvents, disinfectants, fecal sterols, polycyclic aromatic hydrocarbons, and high-use domestic pesticides. Sediment and soil samples are extracted using a pressurized solvent extraction system. The compounds of interest are extracted from interfering matrix components by high-pressure water/isopropyl alcohol extraction. The compounds were isolated using disposable solid-phase extraction (SPE) cartridges containing chemically modified polystyrene-divinylbenzene resin. The cartridges were dried with nitrogen gas, and then sorbed compounds were eluted with methylene chloride (80 percent)-diethyl ether (20 percent) through Florisil/sodium sulfate SPE cartridge, and then determined by capillary-column gas chromatography/mass spectrometry. Recoveries in reagent-sand samples fortified at 4 to 72 micrograms averaged 76 percent ?13 percent relative standard deviation for all method compounds. Initial method reporting levels for single-component compounds ranged from 50 to 500 micrograms per kilogram. The concentrations of 20 out of 61 compounds initially will be reported as estimated with the 'E' remark code for one of three reasons: (1) unacceptably low-biased recovery (less than 60 percent) or highly variable method performance (greater than 25 percent relative standard deviation), (2) reference standards prepared from technical mixtures, or (3) potential blank contamination. Samples were preserved by freezing to -20 degrees Celsius. The U.S. Geological Survey National Water Quality Laboratory has established a 1-year sample-holding time limit (prior to sample extraction) from the date of sample collection (if the sample is kept at -20?C) until a statistically accepted method can be used to determine the effectiveness of the sample-freezing procedure.

Partitioning and transport of total and methyl mercury in the Lower Fox River, Wisconsin

USGS Publications Warehouse

Hurley, J.P.; Cowell, S.E.; Shafer, M.M.; Hughes, P.E.

1998-01-01

To investigate transport and partitioning processes of Hg(T) in the Fox River, we coupled detailed time series data of total mercury (Hg(T)) at the river mouth with transect sampling in the Lower Fox River. Unfiltered Hg(T) concentrations in the Fox River during the study period (April 1994-October 1995) ranged from 1.8 to 182 ng L(-1) with a median of 24.8 ng L-1, predominantly (93.6%) in the particulate phase. These levels were significantly elevated compared with other large tributaries to Lake Michigan (Hurley, J. P.; Shafer, M. M.; Cowell, S. E.; Overdier, J. T.; Hughes, P. E.; Armstrong, D. E. Environ. Sci. Technol. 1996, 30, 20932098). Transect sampling revealed progressively increasing water column Hg(T) concentrations and Hg(T) particulate enrichment downstream, which were consistent with trends in sediment Hg(T) levels in the river. Resuspended sediments are likely the predominant source of Hg from the Fox River into Green Bay. Despite elevated Hg(T) concentrations, methyl mercury (MeHg) concentrations were relatively low, suggesting limited bioavailability of Hg(T) associated with sediments.To investigate transport and partitioning processes of HgT in the Fox River, we coupled detailed time series data of total mercury (HgT) at the river mouth with transect sampling in the Lower Fox River. Unfiltered HgT concentrations in the Fox River during the study period (April 1994-October 1995) ranged from 1.8 to 182 ng L-1 with a median of 24.8 ng L-1, predominantly (93.6%) in the particulate phase. These levels were significantly elevated compared with other large tributaries to Lake Michigan. Transect sampling revealed progressively increasing water column HgT concentrations and HgT particulate enrichment downstream, which were consistent with trends in sediment HgT levels in the river. Resuspended sediments are likely the predominant source of Hg from the Fox River into Green Bay. Despite elevated HgT concentrations, methyl mercury (MeHg) concentrations were relatively low, suggesting limited bioavailability of HgT associated with sediments.

High growth potential and nitrogen removal performance of marine anammox bacteria in shrimp-aquaculture sediment.

PubMed

Van Duc, Luong; Song, Bongkeun; Ito, Hiroaki; Hama, Takehide; Otani, Masashi; Kawagoshi, Yasunori

2018-04-01

Anaerobic ammonium oxidation (anammox) bacteria were enriched in continuous packed-bed columns with marine sediment. One column (SB-C) was packed with only marine sediment collected from a shrimp-aquaculture pond, and another column (SB-AMX) was inoculated with marine anammox bacteria (MAB) as a control. These columns were continuously fed with natural or artificial seawater including ammonium (NH 4 + ) and nitrite (NO 2 - ). The SB-AMX showed anammox activities from the beginning and continued for over 200 days. However, the SB-C had no nitrogen removal performance for over 170 days. After adding a bicarbonate solution (KHCO 3 ) to the sediment-only packed column, anammox activity was observed within 13 days. The column exhibited a nitrogen removal efficiency (NRE) of 88% at a nitrogen loading rate (NLR) of 1.0 kg-N·m -3 ·day -1 , which was comparable to the control one. A next-generation sequencing analysis revealed the predominance of MAB related to "Candidatus Scalindua spp.". In addition, the co-occurrence of sulfur-oxidizing denitrifiers was observed, which suggests their symbiotic relationship. This study suggests the applicability of MAB for in-situ bioremediation of nitrogen-contaminated marine sediments and reveals a potential microbial interaction between anammox and sulfur-oxidizing communities responsible for nitrogen and sulfur cycling in marine aquaculture systems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Distribution patterns of particulate trace metals in the water column and nepheloid layer of the Gulf of Riga.

PubMed

Poikāne, Rita; Carstensen, Jacob; Dahllöf, Ingela; Aigars, Juris

2005-07-01

The dynamics (fate) of trace metals in suspended particulate matter within the Gulf of Riga has not yet been adequately addressed in the scientific literature. Therefore, during a two year period (2001-2002) samples of suspended particulate matter and surface sediments for trace metal analysis were collected in the Gulf of Riga and the Daugava river, and these data were combined with background information from the national marine monitoring program in Latvia. This paper presents a descriptive study of solid phase trace metals (aluminium, iron, cadmium, chromium, copper, manganese, nickel, lead and zinc) dynamics and their spatial distribution within the Gulf of Riga based on Principal Component Analysis and Cluster analysis. Fluvial particulate matter and particulate Al, Fe, Cr and Ni were brought into the Gulf of Riga mainly during spring flood and thereafter quickly diluted by the water masses of the Gulf of Riga. Fine-grained suspended material and particulate Al and Fe were well mixed and evenly distributed through all deepwater basins of the Gulf of Riga. The increase of particulate Mn below the thermocline in August and a strong negative correlation with dissolved oxygen concentrations suggested that particulate Mn in the water column and the sediments were regulated mainly by changing oxic-anoxic conditions in the sediments of the Gulf of Riga. The observed correlation between Al and Fe in the water column is in contrast to that observed in the nepheloid layer where Fe correlated with Mn, obviously due to fast diagenetic processes on sediment surface. The observed negative correlation of Cd and Zn with total carbon and total nitrogen in the nepheloid layer might indicate different sedimentation mechanisms of these elements, however, this assumption is still inconclusive.

Redox-sensitivity and mobility of selected pharmaceutical compounds in a laboratory column experiment

NASA Astrophysics Data System (ADS)

Banzhaf, S.; Nödler, K.; Licha, T.; Krein, A.; Scheytt, T.

2012-04-01

Laboratory column experiments are suitable to investigate the sediment water interaction and to study the transport behaviour of solutes. Processes like retardation and degradation can be identified and quantified. The conducted experiment, which is closely connected to a field study in Luxembourg, investigated the transport behaviour of selected pharmaceutical compounds and their redox-dependent metabolism under water saturated conditions. Fine-grained natural sediment with a low hydraulic conductivity from a study site in Luxembourg was filled into the column. The water for the experiment was taken from a small stream at the same fieldsite. It was spiked with four pharmaceutical compounds (carbamazepine, diclofenac, ibuprofen, sulfamethoxazole) with concentrations between 170 and 300 ng/L for the different substances. The chosen pharmaceuticals were also detected in groundwater and surface water samples at the study site and used to qualify exchange/mixing of surface water and groundwater (BANZHAF et al., 2011). As some of the substances are known to exhibit redox-sensitive degradation, the redox-conditions were systematically varied throughout the experiment. This was realised by adding nitrate at the inflow of the column. During the experiment, which lasted for 2.5 months, four different nitrate concentrations (20-130 mg/L) were applied, beginning with the highest concentration. During the experiment water from the reservoir tank was sampled daily in order to detect a potential degradation of the pharmaceutical compounds before they enter the column. The effluent water was sampled every three hours to guarantee a maximum resolution for the analysis of the pharmaceuticals where necessary. In addition, major ions were analysed in the influent and effluent samples. Throughout the experiment physicochemical parameters (oxidation reduction potential (ORP), dissolved oxygen, electrical conductivity, and pH-value) were measured and logged at the outflow of the column. At the beginning, the ORP was positive (200 mV) and then dropped continuously. Negative values were reached after 1 month and at the end of the experiment -300 mV were measured. Apart from nitrate and nitrite no significant changes in ion concentrations were detected in the effluent. However, the added pharmaceuticals showed very different behaviour in the column. Diclofenac and especially carbamazepine were highly absorbed by the sediment. They were detected significantly later at the outflow of the column than sulfamethoxazole and ibuprofen. Sulfamethoxazole was heavily influenced by the redox-conditions. Its time variation curve in the effluent is negatively correlated with nitrite and nitrate: during nitrite formation the concentrations of sulfamethoxazole dropped considerably. The presented experiment yields a better understanding of the processes influencing the occurrence and transport behaviour of the studied compounds. In addition, some general findings on redox-dependent transport behaviour and metabolism of the antibiotic sulfamethoxazole are gained. This emphasizes the role of the ORP as a key parameter for the behaviour of this compound, which has to be considered. BANZHAF, S., KREIN, A. & SCHEYTT, T. (2011). Investigative approaches to determine exchange processes in the hyporheic zone of a low permeability riverbank. Hydrogeology Journal 19 (3), pp. 591-601.

EVIDENCE FOR MICROBIAL ENHANCED ELECTRICAL CONDUCTIVITY IN HYDROCARBON-CONTAMINATED SEDIMENTS

EPA Science Inventory

Electrical conductivity of sediments during microbial mineralization of diesel was investigated in a mesoscale column experiment consisting of biotic contaminated and uncontaminated columns. Microbial population numbers increased with a clear pattern of depth zonation within the ...

Benthic iron and phosphorus release from river dominated shelf sediments under varying bottom water O2 concentrations.

NASA Astrophysics Data System (ADS)

Ghaisas, N. A.; Maiti, K.; White, J. R.

2017-12-01

Phosphorus (P) cycling in coastal ocean is predominantly controlled by river discharge and biogeochemistry of the sediments. In coastal Louisiana, sediment biogeochemistry is strongly influenced by seasonally fluctuating bottom water O2, which, in turn transitions the shelf sediments from being a sink to source of P. Sediment P-fluxes were 9.73 ± 0.76 mg / m2 /d and 0.67±0.16 mg/m2/d under anaerobic and aerobic conditions respectively, indicating a 14 times higher P-efflux from oxygen deprived sediments. A high sedimentary oxygen consumption rate of 889 ± 33.6 mg/m2/d was due to organic matter re-mineralization and resulted in progressively decreasing the water column dissolved O2 , coincident with a P-flux of 7.2 ± 5.5 mg/m2/d from the sediment. Corresponding water column flux of Fe total was 19.7 ± 7.80 mg/m2/d and the sediment-TP decreased from 545 mg/Kg to 513 mg/Kg. A simultaneous increase in pore water Fe and P concentrations in tandem with a 34.6% loss in sedimentary Fe-bound P underscores the importance of O2 on coupled Fe- P biogeochemistry. This study suggests that from a 14,025 sq. km hypoxia area, Louisiana shelf sediments can supply 1.33x105 kg P/day into the water column compared to 0.094 x 105 kg P/day during the fully aerobic water column conditions.

Impact of seasonal variation on Escherichia coli concentrations in the riverbed sediments in the Apies River, South Africa.

PubMed

Abia, Akebe Luther King; Ubomba-Jaswa, Eunice; Momba, Maggy Ndombo Benteke

2015-12-15

Many South Africans living in resource-poor settings with little or no access to pipe-borne water still rely on rivers as alternative water sources for drinking and other purposes. The poor microbial quality of such water bodies calls for appropriate monitoring. However, routine monitoring only takes into consideration the microbial quality of the water column, and does not include monitoring of the riverbed sediments for microbial pollution. This study sought to investigate the microbial quality of riverbed sediments in the Apies River, Gauteng Province, South Africa, using Escherichia coli as a faecal indicator organism and to investigate the impact of seasonal variation on its abundance. Weekly samples were collected at 10 sampling sites on the Apies River between May and August 2013 (dry season) and between January and February 2014 (wet season). E. coli was enumerated using the Colilert®-18 Quanti-Tray® 2000 system. All sites tested positive for E. coli. Wastewater treatment work effluents had the highest negative impact on the river water quality. Seasonal variations had an impact on the concentration of E. coli both in water and sediments with concentrations increasing during the wet season. A strong positive correlation was observed between temperature and the E. coli concentrations. We therefore conclude that the sediments of the Apies River are heavily polluted with faecal indicator bacteria and could also harbour other microorganisms including pathogens. The release of such pathogens into the water column as a result of the resuspension of sediments due to extreme events like floods or human activities could increase the health risk of the populations using the untreated river water for recreation and other household purposes. There is therefore an urgent need to reconsider and review the current South African guidelines for water quality monitoring to include sediments, so as to protect human health and other aquatic lives. Copyright © 2015 Elsevier B.V. All rights reserved.

Effect of Subgrid Heterogeneity on Scaling Geochemical and Biogeochemical Reactions: A Case of U(VI) Desorption

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Chongxuan; Shang, Jianying; Shan, Huimei

2014-02-04

The effect of subgrid heterogeneity in sediment properties on the rate of uranyl[U(VI)] desorption was investigated using a sediment collected from the US Department of Energy Hanford site. The sediment was sieved into 7 grain size fractions that each exhibited different U(VI) desorption properties. Six columns were assembled using the sediment with its grain size fractions arranged in different spatial configurations to mimic subgrid heterogeneity in reactive transport properties. The apparent rate of U(VI) desorption varied significantly in the columns. Those columns with sediment structures leading to preferential transport had much lower rates of U(VI) desorption than those with relativelymore » homogeneous transport. Modeling analysis indicated that the U(VI) desorption model and parameters characterized from well-mixed reactors significantly over-predicted the measured U(VI) desorption in the columns with preferential transport. A dual domain model, which operationally separates reactive transport properties into two subgrid domains improved the predictions significantly. A similar effect of subgrid heterogeneity, albeit at a less degree, was observed for denitrification, which also occurred in the columns. The results imply that subgrid heterogeneity is an important consideration in extrapolating reaction rates from the laboratory to field.« less

Akinetes May Be Representative of Past Nostocalean Blooms: a Case Study of Their Benthic Spatiotemporal Distribution and Potential for Germination in a Eutrophic Lake

PubMed Central

Le Jeune, Anne-Hélène; Colombet, Jonathan; Thouvenot, Antoine; Latour, Delphine

2017-01-01

ABSTRACT Monitoring of water and surface sediment in a French eutrophic lake (Lake Aydat) was carried out over a 2-year period in order to determine whether akinetes in sediment could be representative of the most recent bloom and to estimate their germination potential. Sediment analysis revealed two akinete species, Dolichospermum macrosporum and Dolichospermum flos-aquae, present in the same proportions as observed for the pelagic populations. Moreover, similar spatial patterns observed for vegetative cells in the water column and akinete distributions in the sediment suggest that akinetes in the sediment may be representative of the previous bloom. However, the relationship between akinetes in the sediment and vegetative cells in the water column was not linear, and other factors may interfere. For example, our results highlighted horizontal transport of akinetes during the winter. The benthic overwinter phase did not seem to influence the percentages of intact akinetes, which remained stable at approximately 7% and 60% for D. macrosporum and D. flos-aquae, respectively. These percentages may thus be the result of processes that occurred in the water column. The intact overwintering akinetes showed germination rates of up to 90% after 72 h for D. flos-aquae or 144 h for D. macrosporum. The difference in akinete germination rates between these two species demonstrates different ecological strategies, which serve to expand the window for germination in time and space and thus optimize colonization of the water column by nostocalean cyanobacteria. IMPORTANCE Cyanobacteria have the ability to proliferate and to form blooms. These blooms can then affect the local ecology, health, and economy. The akinete, a resistant cell type that persists in sediment, is an important intermediate phase between previous and future blooms. We monitored the water column and the surface sediment of a French eutrophic lake (Lake Aydat) to investigate the relationship between vegetative cells in the water column and akinetes in the sediment. This study focused on the characterization of spatiotemporal akinete distributions, cellular integrity, and germination potential. Species-specific ecological strategies were highlighted and may partly explain the temporal succession of species in the water column. Akinetes may also be used to understand past nostocalean blooms and to predict future ones. PMID:28970224

ENANTIOMER FRACTIONS OF CHLORDANE COMPOUNDS IN SEDIMENT SAMPLES FROM U.S. GEOLOGICAL SURVEY SITES IN LAKES, RIVERS AND RESERVOIRS

EPA Science Inventory

The environmental behavior of the enantiomers of cis- and trans-chlordane has been the topic of much research since the first chiral separations on cyclodextrin gas chromatography (GC) columns. When chlordane is manufactured, it is always a racemic mixture (equal portion of two e...

Modeling Benthic Sediment Processes to Predict Water ...

EPA Pesticide Factsheets

The benthic sediment acts as a huge reservoir of particulate and dissolved material (within interstitial water) which can contribute to loading of contaminants and nutrients to the water column. A benthic sediment model is presented in this report to predict spatial and temporal benthic fluxes of nutrients and chemicals in Narragansett Bay. A benthic sediment model is presented in this report to identify benthic flux into the water column in Narragansett Bay. Benthic flux is essential to properly model water quality and ecology in estuarine and coastal systems.

Microplastic in beach sediments of the Isle of Rügen (Baltic Sea) - Implementing a novel glass elutriation column.

PubMed

Hengstmann, Elena; Tamminga, Matthias; Vom Bruch, Constantin; Fischer, Elke Kerstin

2018-01-01

To extent the understanding on microplastics in the marine environment we performed a case study at four beaches on the Isle of Rügen considering abundance and spatial distribution of microplastics in beach sediments. For the analysis, density separation via a glass elutriation column was implemented. In advance, efficiencies were tested for two polymers, being not buoyant in water. Recovery rates of 80% for PET and 72% for PVC particles in sandy samples were achieved. A median abundance of 88.10 (Q 1 =55.01/Q 3 =114.72) microplastic particles per kg dry sediment or 2862.56 (Q 1 =1787.34/Q 3 =3727.28) particles per m 2 was found at the beaches on Rügen. Fibers were more abundant than fragments at all beaches. In this study, no statistically significant differences but only tendencies were determined between the beaches with different exposition and anthropogenic activity as well as for distribution patterns which showed that microplastic fragments accumulate in topographic depressions, similar to macrolitter items. Copyright © 2017 Elsevier Ltd. All rights reserved.

Distribution, abundance and carbon isotopic composition of gaseous hydrocarbons in Big Soda Lake, Nevada: An alkaline, meromictic lake

USGS Publications Warehouse

Oremland, R.S.; Des Marais, D.J.

1983-01-01

Distribution and isotopic composition (??13C) of low molecular weight hydrocarbon gases were studied in Big Soda Lake (depth = 64 m), an alkaline, meromictic lake with permanently anoxic bottom waters. Methane increased with depth in the anoxic mixolimnion (depth = 20-35 m), reached uniform concentrations (55 ??M/l) in the monimolimnion (35-64 m) and again increased with depth in monimolimnion bottom sediments (>400 ??M/kg below 1 m sub-bottom depth). The ??13C[CH4] values in bottom sediment below 1 m sub-bottom depth (<-70 per mil) increased with vertical distance up the core (??13C[CH4] = -55 per mil at sediment surface). Monimolimnion ??13C[CH4] values (-55 to -61 per mil) were greater than most ??13C[CH4] values found in the anoxic mixolimnion (92% of samples had ??13C[CH4] values between -20 and -48 per mil). No significant concentrations of ethylene or propylene were found in the lake. However ethane, propane, isobutane and n-butane concentrations all increased with water column depth, with respective maximum concentrations of 260, 80, 23 and 22 nM/l encountered between 50-60 m depth. Concentrations of ethane, propane and butanes decreased with depth in the bottom sediments. Ratios of CH4 [C2H6 + C3H8] were high (250-620) in the anoxic mixolimnion, decreased to ~161 in the monimolimnion and increased with depth in the sediment to values as high as 1736. We concluded that methane has a biogenic origin in both the sediments and the anoxic water column and that C2-C4 alkanes have biogenic origins in the monimolimnion water and shallow sediments. The changes observed in ??13C[CH4] and CH4 (C2H6 + C3H8) with depth in the water column and sediments are probably caused by bacteria] processes. These might include anaerobic methane oxidation and different rates of methanogenesis and C2 to C4 alkane production by microorganisms. ?? 1983.

Identification of water-quality trends using sediment cores from Dillon Reservoir, Summit County, Colorado

USGS Publications Warehouse

Greve, Adrienne I.; Spahr, Norman E.; Van Metre, Peter C.; Wilson, Jennifer T.

2001-01-01

Since the construction of Dillon Reservoir, in Summit County, Colorado, in 1963, its drainage area has been the site of rapid urban development and the continued influence of historical mining. In an effort to assess changes in water quality within the drainage area, sediment cores were collected from Dillon Reservoir in 1997. The sediment cores were analyzed for pesticides, polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs), and trace elements. Pesticides, PCBs, and PAHs were used to determine the effects of urban development, and trace elements were used to identify mining contributions. Water-quality and streambed-sediment samples, collected at the mouth of three streams that drain into Dillon Reservoir, were analyzed for trace elements. Of the 14 pesticides and 3 PCBs for which the sediment samples were analyzed, only 2 pesticides were detected. Low amounts of dichloro-diphenyldichloroethylene (DDE) and dichloro-diphenyldichloroethane (DDD), metabolites of dichlorodiphenyltrichloroethane (DDT), were found at core depths of 5 centimeters and below 15 centimeters in a core collected near the dam. The longest core, which was collected near the dam, spanned the entire sedimentation history of the reservoir. Concentrations of total combustion PAH and the ratio of fluoranthene to pyrene in the core sample decreased with core depth and increased over time. This relation is likely due to growth in residential and tourist populations in the region. Comparisons between core samples gathered in each arm of the reservoir showed the highest PAH concentrations were found in the Tenmile Creek arm, the only arm that has an urban area on its shores, the town of Frisco. All PAH concentrations, except the pyrene concentration in one segment in the core near the dam and acenaphthylene concentrations in the tops of three cores taken in the reservoir arms, were below Canadian interim freshwater sediment-quality guidelines. Concentrations of arsenic, cadmium, chromium, copper, lead, and zinc in sediment samples from Dillon Reservoir exceeded the Canadian interim freshwater sediment-quality guidelines. Copper, iron, lithium, nickel, scandium, titanium, and vanadium concentrations in sediment samples decreased over time. Other elements, while no trend was evident, displayed concentration spikes in the down-core profiles, indicating loads entering the reservoir may have been larger than they were in 1997. The highest concentrations of copper, lead, manganese, mercury, and zinc were detected during the late 1970's and early 1980's. Elevated concentrations of trace elements in sediment in Dillon Reservoir likely resulted from historical mining in the drainage area. The downward trend identified for copper, iron, lithium, nickel, scandium, titanium, and vanadium may be due in part to restoration efforts in mining-affected areas and a decrease in active mining in the Dillon Reservoir watershed. Although many trace-element core-sediment concentrations exceeded the Canadian probable effect level for freshwater lakes, under current limnological conditions, the high core-sediment concentrations do not adversely affect water quality in Dillon Reservoir. The trace-element concentrations in the reservoir water column meet the standards established by the Colorado Water Quality Control Commission. Although many trace-element core-sediment concentrations exceeded the Canadian probable effect level for freshwater lakes, under current limnological conditions, the high core-sediment concentrations do not adversely affect water quality in Dillon Reservoir. The trace-element concentrations in the reservoir water column meet the standards established by the Colorado Water Quality Control Commission.

Sources of core and intact branched tetraether membrane lipids in the lacustrine environment: Anatomy of Lake Challa and its catchment, equatorial East Africa

NASA Astrophysics Data System (ADS)

Buckles, Laura K.; Weijers, Johan W. H.; Verschuren, Dirk; Sinninghe Damsté, Jaap S.

2014-09-01

The MBT/CBT palaeotemperature proxy uses the distribution of branched glycerol dialkyl glycerol tetraethers (brGDGTs), membrane lipids that are supposed to derive from soil bacteria, to reconstruct mean annual air temperature (MAAT). Applied successfully in coastal marine sediments, its extension to lake-sediment records with potentially high time resolution would greatly expand its utility. Over the last years, however, studies have indicated the presence of additional sources of brGDGTs within lake systems. To constrain the factors influencing the MBT/CBT palaeotemperature proxy in lakes, detailed investigation of brGDGT fluxes in a modern lake system is necessary to identify their potential sources. This study concentrates on Lake Challa, a permanently stratified crater lake in equatorial East Africa with limited catchment area. An almost 3-year time series of approximately monthly samples of settling particles, supplemented with a depth profile of suspended particulate matter (SPM) and sets of profundal surface-sediment and catchment soil samples, were analysed for both the 'living' intact polar lipids (IPLs) and 'fossil' core lipids (CLs) of GDGTs. We found that brGDGTs are produced in oxic, suboxic and anoxic zones of the water column, and in substantial amounts compared to influxes from catchment soils. Additional in situ production within the lake sediments is most probable, but cannot be definitely confirmed at this time. These lacustrine brGDGTs display a different response to temperature variation than soil-derived brGDGTs, signifying either a different physiological adaptation to changing conditions within the water column and/or a different composition of the respective bacterial communities. Using this specific relationship with temperature, a local calibration based on brGDGT distributions in SPM generates relatively accurate water temperature estimates from settling particles but fails for surface sediments.

Quaternary Sediment Accumulation in the Aleutian Trench: Implications for Dehydration Reaction Progress and Pore Pressure Development Offshore Alaska

NASA Astrophysics Data System (ADS)

Meridth, L. N.; Screaton, E.; Jaeger, J. M.; James, S. R.; Villaseñor, T. G.

2015-12-01

Sediment inputs to subduction zones impart a significant control on diagenetic reaction progress, fluid production and pore pressure development and thus affect hydrologic and tectonic behavior during subduction. Intensified glaciation following the mid-Pleistocene transition increased sediment flux to the Gulf of Alaska. Rapid sediment accumulation (>1 km/my) in the Aleutian Trench increases overburden and should accelerate dehydration of hydrous sedimentary components by elevating temperatures in the incoming sediment column. These processes have the potential to generate fluid overpressures in the mud-dominated, low permeability sediments deposited on the incoming plate, offshore SE Alaska. Mineralogical analyses on incoming sediments from Deep Sea Drilling Project Leg 18 and Integrated Ocean Drilling Program Expedition 341 show that both smectite and Opal-A are present as hydrous mineral phases. A 1-D numerical model was developed to track dehydration reaction progress and pore pressures in the incoming sediment column from the abyssal plain to the Aleutian Trench. Simulated temperatures in the incoming column increase due to the insulating effect of trench sediments. As a result, trench sedimentation causes smectite dehydration to begin and Opal-A dehydration to nearly reach completion at the deformation front. Simulated excess pore pressures in the proto-decollement zone increase from nearly hydrostatic to almost half of lithostatic due to the rapid deposition of trench sediments. The 1-D modeling results were incorporated into a 2-D model that follows the underthrust column at the deformation front into the subduction zone. Simulated results of the 2-D flow model illustrate the effects of lateral flow on pore pressure distribution following subduction.

Novel decomposition products of chlorophyll- a in continental shelf (Louisiana shelf) sediments: formation and transformation of carotenol chlorin esters

NASA Astrophysics Data System (ADS)

Chen, Nianhong; Bianchi, Thomas S.; Bland, John M.

2003-06-01

In April 2000, we collected box cores from five stations along a cross-shelf transect on the Louisiana (LA) continental shelf. Novel esters of carotenols and chlorins (carotenoid chlorin esters, CCEs), which are highly specific grazing markers, were identified in surface and deep sediments (>10 cm) from the LA shelf. Chlorophyll- a inventory indicated that CCEs are one of the major decay products of chlorophyll- a in shelf sediments. Abundances of total CCEs (9-18%) in surface sediments along the cross-shelf transect were comparable to the abundance of pheophytin- a, pyropheophytin- a, and total steryl chlorin esters (SCEs). Prior work has identified four CCEs which have dehydrated fucoxanthin/fucoxanthinol as a substitute alcohol of phytol. We report on four newly identified CCEs associated with nondehydrated fuxocanthin/fucoxanthinol esterified to (pyro)pheophorbide- a. These nondehydrated CCEs were generally present in lower concentrations than their dehydrated counterparts, but were detectable by atmospheric pressure chemical ionization (APCI) mass spectrometry coupled with high-performance liquid chromatography (HPLC). We attributed differences between this study and previous work to the time allowed for predepositional decay and grazing processes to occur. The rapid sedimentation of CCEs in the shallow water column (ca. 10 m) on the LA shelf allowed for effective burial of all CCEs compared to the deeper water column regions sampled by previous work. This speculation is supported by the fact that the concentrations of CCEs with nondehydrated fucoxanthin/fucoxanthinol were extremely low in sediments from the site on the outer LA shelf with a deeper (253 m) water column. We also tentatively identified an additional CCE and its isomer as fucoxanthinol didehydrate pyropheophorbide- a ester. We suggest that the formation and transformation of CCEs are primarily controlled by the following three biologically mediated reactions: demethoxycarbonylation, dehydration, and deacetylation. Our laboratory copepod grazing experiment also confirmed that CCEs can be excellent class-specific biomarkers of zooplankton grazing on phytoplankton.

Oceanographic and topographic conditions structure benthic meiofauna communities in the Weddell Sea, Bransfield Strait and Drake Passage (Antarctic)

NASA Astrophysics Data System (ADS)

Veit-Köhler, Gritta; Durst, Stephan; Schuckenbrock, Jan; Hauquier, Freija; Durán Suja, Laura; Dorschel, Boris; Vanreusel, Ann; Martínez Arbizu, Pedro

2018-03-01

The marine environment of the tip of the Antarctic Peninsula is characterised by three oceanographically distinct regions for which we linked continental-slope meiofaunal patterns and environmental drivers on a large scale (100-300 km among ecoregions). Samples for meiofauna communities and sediment analyses were collected with a multicorer, water-column data were derived from water samples and CTD recordings. Meiofauna communities including individuals from 19 higher taxa were compared to a set of 16 environmental variables. We detected significant differences between the communities of Weddell Sea and those of Bransfield Strait and Drake Passage. The amount of phytopigments in the sediment, their freshness and the silt and clay content were driving factors for this separation. The highest meiofauna abundances were found at slopes in the Weddell Sea. Food banks may facilitate high standing stocks. There, the highest ever recorded copepod percentages for the Antarctic were related to the highest phytopigment contents while nematodes were extremely abundant even in deeper sediment layers at stations with fresh organic material. For Bransfield Strait and Drake Passage a sampling scheme of slopes and adjacent troughs was applied. The two regions were divided into three geographical "areas" with the two "habitat" types investigated for each area. Multivariate non-parametric permutational analysis of variance (PERMANOVA) showed that in Bransfield Strait slope and trough meiofauna communities differed significantly in all geographical areas while in Drake Passage this was only the case in the East. These differences were explained best by the regionally and topographically distinct characteristics of 7 out of 11 water-column and sediment-bound factors related to sediment grain size, food quantity and quality, water temperature and salinity. Environmental drivers of the benthic habitat are dependent on large-scale oceanographic conditions and are thus sensitive to changes in water mass characteristics, sea-ice cover and the related primary production.

Vertical suspsended sediment fluxes observed from ocean gliders

NASA Astrophysics Data System (ADS)

Merckelbach, Lucas; Carpenter, Jeffrey

2016-04-01

Many studies trying to understand a coastal system in terms of sediment transport paths resort to numerical modelling - combining circulation models with sediment transport models. Two aspects herein are crucial: sediment fluxes across the sea bed-water column interface, and the subsequent vertical mixing by turbulence. Both aspects are highly complex and have relatively short time scales, so that the processes involved are implemented in numerical models as parameterisations. Due to the effort required to obtain field observations of suspended sediment concentrations (and other parameters), measurements are scarce, which makes the development and tuning of parameterisations a difficult task. Ocean gliders (autonomous underwater vehicles propelled by a buoyancy engine) provide a platform complementing more traditional methods of sampling. In this work we present observations of suspended sediment concentration (SSC) and dissipation rate taken by two gliders, each equipped with optical sensors and a microstructure sensor, along with current observations from a bottom mounted ADCP, all operated in the German Bight sector of the North Sea in Summer 2014. For about two weeks of a four-week experiment, the gliders were programmed to fly in a novel way as Lagrangian profilers to water depths of about 40 m. The benefit of this approach is that the rate of change of SSC - and other parameters - is local to the water column, as opposed to an unknown composition of temporal and spatial variability when gliders are operated in the usual way. Therefore, vertical sediment fluxes can be calculated without the need of the - often dubious - assumption that spatial variability can be neglected. During the experiment the water column was initially thermally stratified, with a cross-pycnocline diffusion coefficient estimated at 7\\cdot10-5 m2 s-1. Halfway through the experiment the remnants of tropical storm Bertha arrived at the study site and caused a complete mixing of the water column. An analysis of the data showed that resuspension and deposition were solely tidally-driven and in equilibrium prior to the arrival of the storm, with an averaged resuspension rate of 3-4 g m-2 s-1. During the storm the effect of surface waves increased the resuspension rate by an order of magnitude. The data suggest that after the passing of the storm, when the tide was the main driver again, resuspension rates are generally higher than before the storm. This provides a further indication that although a (Summer) storm might be a short-term event, its effects on sediment transport may be felt on much longer time scales.

Laboratory studies to characterize the efficacy of sand capping a coal tar-contaminated sediment.

PubMed

Hyun, Seunghun; Jafvert, Chad T; Lee, Linda S; Rao, P Suresh C

2006-06-01

Placement of a microbial active sand cap on a coal tar-contaminated river sediment has been suggested as a cost effective remediation strategy. This approach assumes that the flux of contaminants from the sediment is sufficiently balanced by oxygen and nutrient fluxes into the sand layer such that microbial activity will reduce contaminant concentrations within the new benthic zone and reduce the contaminant flux to the water column. The dynamics of such a system were evaluated using batch and column studies with microbial communities from tar-contaminated sediment under different aeration and nutrient inputs. In a 30-d batch degradation study on aqueous extracts of coal tar sediment, oxygen and nutrient concentrations were found to be key parameters controlling the degradation rates of polycyclic aromatic hydrocarbons (PAHs). For the five PAHs monitored (naphthalene, fluorene, phenanthrene, anthracene, and pyrene), degradation rates were inversely proportional to molecular size. For the column studies, where three columns were packed with a 20-cm sand layer on the top of a 5 cm of sediment layer, flow was established to sand layers with (1) aerated water, (2) N(2) sparged water, or (3) HgCl(2)-sterilized N(2) sparged water. After steady-state conditions, PAH concentrations in effluents were the lowest in the aerated column, except for pyrene, whose concentration was invariant with all effluents. These laboratory scale studies support that if sufficient aeration can be achieved in the field through either active and passive means, the resulting microbially active sand layer can improve the water quality of the benthic zone and reduce the flux of many, but not all, PAHs to the water column.

Aerobic and anaerobic degradation and mineralization of 14C-chitin by water column and sediment inocula of the York River estuary, Virginia.

PubMed Central

Boyer, J N

1994-01-01

Potential rates of chitin degradation (Cd) and mineralization (Cm) by estuarine water and sediment bacteria were measured as a function of inoculum source, temperature, and oxygen condition. In the water column inoculum, 88 to 93% of the particulate chitin was mineralized to CO2 with no apparent lag between degradation and mineralization. No measurable dissolved pool of radiolabel was found in the water column. For the sediment inocula, 70 to 90% of the chitin was degraded while only 55 to 65% was mineralized to CO2. 14C label recoveries in the dissolved pool were 19 to 21% for sand, 17 to 24% in aerobic mud, and 12 to 21% for the anaerobic mud. This uncoupling between degradation and mineralization occurred in all sediment inocula. More than 98% of the initial 14C-chitin was recovered in the three measured fractions. The highest Cd and Cm values, 30 and 27% day-1, occurred in the water column inoculum at 25 degrees C. The lowest Cd and Cm values were found in the aerobic and anaerobic mud inocula incubated at 15 degrees C. Significant differences in Cd and Cm values among water column and sediment inocula as well as between temperature treatments were evident. An increased incubation temperature resulted in shorter lag times before the onset of chitinoclastic bacterial growth, degradation, and mineralization and resulted in apparent Q10 values of 1.1 for water and 1.3 to 2.1 for sediment inocula. It is clear that chitin degradation and mineralization occur rapidly in the estuary and that water column bacteria may be more important in this process than previously acknowledged. PMID:8117075

Effect of Oxalic Acid Treatment on Sediment Arsenic Concentrations and Lability under Reducing Conditions

PubMed Central

Sun, Jing; Bostick, Benjamin C.; Mailloux, Brian J.; Ross, James M.; Chillrud, Steven N.

2016-01-01

Oxalic acid enhances arsenic (As) mobilization by dissolving As host minerals and competing for sorption sites. Oxalic acid amendments thus could potentially improve the efficiency of widely used pump-and-treat (P&T) remediation. This study investigates the effectiveness of oxalic acid on As mobilization from contaminated sediments with different As input sources and redox conditions, and examines whether residual sediment As after oxalic acid treatment can still be reductively mobilized. Batch extraction, column, and microcosm experiments were performed in the laboratory using sediments from the Dover Municipal Landfill and the Vineland Chemical Company Superfund sites. Oxalic acid mobilized As from both Dover and Vineland sediments, although the efficiency rates were different. The residual As in both Dover and Vineland sediments after oxalic acid treatment was less vulnerable to microbial reduction than before the treatment. Oxalic acid could thus improve the efficiency of P&T. X-ray absorption spectroscopy analysis indicated that the Vineland sediment samples still contained reactive Fe(III) minerals after oxalic acid treatment, and thus released more As into solution under reducing conditions than the Dover samples. Therefore, the efficacy of P&T must consider sediment Fe mineralogy when evaluating its overall potential for remediating groundwater As. PMID:26970042

Seasonal arsenic accumulation in stream sediments at a groundwater discharge zone.

PubMed

MacKay, Allison A; Gan, Ping; Yu, Ran; Smets, Barth F

2014-01-21

Seasonal changes in arsenic and iron accumulation rates were examined in the sediments of a brook that receives groundwater discharges of arsenic and reduced iron. Clean glass bead columns were deployed in sediments for known periods over the annual hydrologic cycle to monitor changes in arsenic and iron concentrations in bead coatings. The highest accumulation rates occurred during the dry summer period (July-October) when groundwater discharges were likely greatest at the sample locations. The intermediate flow period (October-March), with higher surface water levels, was associated with losses of arsenic and iron from bead column coatings at depths below 2-6 cm. Batch incubations indicated iron releases from solids to be induced by biological reduction of iron (oxy)hydroxide solids. Congruent arsenic releases during incubation were limited by the high arsenic sorption capacity (0.536 mg(As)/mg(Fe)) of unreacted iron oxide solids. The flooded spring (March-June) with high surface water flows showed the lowest arsenic and iron accumulation rates in the sediments. Comparisons of accumulation rates across a shoreline transect were consistent with greater rates at regions exposed above surface water levels for longer times and greater losses at locations submerged below surface water. Iron (oxy)hydroxide solids in the shallowest sediments likely serve as a passive barrier to sorb arsenic released to pore water at depth by biological iron reduction.

High‐precision determination of lithium and magnesium isotopes utilising single column separation and multi‐collector inductively coupled plasma mass spectrometry

PubMed Central

Misra, Sambuddha; Lloyd, Nicholas; Elderfield, Henry; Bickle, Mike J.

2017-01-01

Rationale Li and Mg isotopes are increasingly used as a combined tool within the geosciences. However, established methods require separate sample purification protocols utilising several column separation procedures. This study presents a single‐step cation‐exchange method for quantitative separation of trace levels of Li and Mg from multiple sample matrices. Methods The column method utilises the macro‐porous AGMP‐50 resin and a high‐aspect ratio column, allowing quantitative separation of Li and Mg from natural waters, sediments, rocks and carbonate matrices following the same elution protocol. High‐precision isotope determination was conducted by multi‐collector inductively coupled plasma mass spectrometry (MC‐ICPMS) on the Thermo Scientific™ NEPTUNE Plus™ fitted with 1013 Ω amplifiers which allow accurate and precise measurements at ion beams ≤0.51 V. Results Sub‐nanogram Li samples (0.3–0.5 ng) were regularly separated (yielding Mg masses of 1–70 μg) using the presented column method. The total sample consumption during isotopic analysis is <0.5 ng Li and <115 ng Mg with long‐term external 2σ precisions of ±0.39‰ for δ7Li and ±0.07‰ for δ26Mg. The results for geological reference standards and seawater analysed by our method are in excellent agreement with published values despite the order of magnitude lower sample consumption. Conclusions The possibility of eluting small sample masses and the low analytical sample consumption make this method ideal for samples of limited mass or low Li concentration, such as foraminifera, mineral separates or dilute river waters. PMID:29078008

Identification of novel sulfur-containing steroids in sediments and petroleum: probable incorporation of sulfur into δ 5,7-sterols during early diagenesis

NASA Astrophysics Data System (ADS)

Sinninghe Damsté, Jaap S.; Schouten, Stefan; de Leeuw, Jan W.; van Duin, Adri C. T.; Geenevasen, Jan A. J.

1999-01-01

A novel sulfur-containing sterane, 4α,7α-epithio-5β-cholestane, has been identified in a sediment extract from the Miocene Northern Apennines marl (Italy) after its isolation by column chromatography and high pressure liquid chromatography. The compound has been characterised by GC-MS and mild Nickel boride desulfurisation and one and two-dimensional 1H NMR techniques. C 27-C 29 homologs have been detected in sediment extracts of three different formations and in one petroleum sample. These sulfur-containing steroids are probably formed by an intramolecular reaction of inorganic sulfides with early diagenetic products of Δ 5,7-sterols.

Environmental assessment of aromatic hydrocarbons-contaminated sediments of the Mexican Salina Cuz Bay.

PubMed

González-Macías, C; Schifter, I; Lluch-Cota, D B; Méndez-Rodríguez, L; Hernández-Vázquez, S

2007-10-01

Concentrations of total aromatic hydrocarbons and extractable organic matter in the water column and sediment were determined in samples collected in the course of the last 20 years from the Salina Cruz Harbor, México, to assess the degree of organic contamination. In sediments, organic compounds accumulate in shallow areas mostly associated with extractable organic matter and fine fractions. Calculated geocumulation index and enrichment factors suggest that contamination could be derived from anthropogenic activities attributed to harbor and ship scrapping activities, as well as transboundary source. Concentration of total aromatic hydrocarbons (as chrysene equivalents) ranged from 0.01 to 534 microg l(-1) in water, and from 0.10 to 2,160 microg g(-1) in sediments. Total aromatic concentration of 5 microg g(-1) is proposed as background concentration.

Occurrence of phosphorus, iron, aluminum, silica, and calcium in a eutrophic lake during algae bloom sedimentation.

PubMed

Li, Guolian; Xie, Fazhi; Zhang, Jin; Wang, Jingrou; Yang, Ying; Sun, Ruoru

2016-09-01

Phosphorus (P) in a water body is mainly controlled by the interaction between surface sediment and the overlying water column after the complete control of external pollution. Significant enhancement of P in a water body would cause eutrophication of lakes. Thus, a better understanding is needed of the occurrences of P between the sediment and water column in eutrophic lakes. Here, we measured total phosphorus (TP) and major elements (Fe, Al, Ca, Mn, Si) in the water column, and total nitrogen, organic matter, TP and major oxides (Fe 2 O 3 , Al 2 O 3 , CaO, SiO 2 ) in surface sediment of Chaohu Lake, a continuously eutrophic lake. The results showed that the rank of TP levels was western lake > eastern lake > southern lake. There were significantly positive correlations between TP (including water TP and sedimentary TP) and Fe, Al, Mn, while the correlation coefficients between water TP and sedimentary TP were -0.43, -0.41 and 0.18 for the western, eastern and southern lake respectively. The negative and significant correlations of water TP and sedimentary TP may indicate that the risk of sedimentary P release was great in the western and eastern lake during algae bloom sedimentation, while the southern lake showed weak P exchange between the sediment and water column.

(99)Tc(VII) Retardation, Reduction, and Redox Rate Scaling in Naturally Reduced Sediments.

PubMed

Liu, Yuanyuan; Liu, Chongxuan; Kukkadapu, Ravi K; McKinley, James P; Zachara, John; Plymale, Andrew E; Miller, Micah D; Varga, Tamas; Resch, Charles T

2015-11-17

An experimental and modeling study was conducted to investigate pertechnetate (Tc(VII)O4(-)) retardation, reduction, and rate scaling in three sediments from Ringold formation at U.S. Department of Energy's Hanford site, where (99)Tc is a major contaminant in groundwater. Tc(VII) was reduced in all the sediments in both batch reactors and diffusion columns, with a faster rate in a sediment containing a higher concentration of HCl-extractable Fe(II). Tc(VII) migration in the diffusion columns was reductively retarded with retardation degrees correlated with Tc(VII) reduction rates. The reduction rates were faster in the diffusion columns than those in the batch reactors, apparently influenced by the spatial distribution of redox-reactive minerals along transport paths that supplied Tc(VII). X-ray computed tomography and autoradiography were performed to identify the spatial locations of Tc(VII) reduction and transport paths in the sediments, and results generally confirmed the newly found behavior of reaction rate changes from batch to column. The results from this study implied that Tc(VII) migration can be reductively retarded at Hanford site with a retardation degree dependent on reactive Fe(II) content and its distribution in sediments. This study also demonstrated that an effective reaction rate may be faster in transport systems than that in well-mixed reactors.

Al-to-oxide and Ti-to-organic linkages in biogenic sediment: relationships to paleo-export production and bulk Al/Ti

NASA Astrophysics Data System (ADS)

Kryc, K. A.; Murray, R. W.; Murray, D. W.

2003-06-01

To increase our understanding of the mechanisms that control the distribution of Al and Ti within marine sediment, we performed sequential extractions targeting the chemical signatures of the loosely bound, exchangeable, carbonate, oxide, organic, opal, and residual fraction of sediment from a carbonate-dominated regime (equatorial Pacific) and from a mixed opal-terrigenous regime (West Antarctic Peninsula). We observe a systematic partitioning of Al and Ti between sediment phases that is related to bulk Al/Ti. We show that, where we can quantify an Alexcess component, the dissolved Al is preferentially affiliated with the oxide fraction, resulting in Al/Ti molar ratios of 500-3000. This is interpreted as the result of surface complexation in the water column of dissolved Al onto oxyhydroxides. We also observe a previously undetected Tiexcess with as much as 80% of the total Ti in the organic fraction, which is most likely a function of metal-organic colloidal removal from the water column. In samples where the excess metals are obscured by the detrital load, the Al and Ti are almost exclusively found in the residual phase. This argues for the paired removal of Al (preferentially by the oxide component) and Ti (preferentially by the organic component) from the water column by settling particulate matter. This research builds upon earlier work that shows changes in the bulk ratio of Al to Ti in carbonate sediment from the central-equatorial Pacific that coincide with changes in the sedimentary bulk accumulation rate (BAR). The ratios that are observed are as much as three times higher than typical shale values, and were interpreted as the result of scavenging of dissolved Al onto particles settling in the water column. Because this non-terrigenous Alexcess accounts for up to 50% of the total sedimentary Al inventory and correlates best with BAR, the bulk Al/Ti may be a sensitive tracer of particle flux and, therefore, export production. Because we show that the excess metals are the result of scavenging processes, the bulk Al/Ti may be considered a sensitive proxy for this region.

Stable carbon isotope ratios of archaeal GDGTs in the marine water column and surface sediments

NASA Astrophysics Data System (ADS)

Pearson, A.; Hurley, S.; Close, H. G.; Jasper, C. E.

2016-12-01

Archaeal glycerol dibiphytanyl glycerol tetraether (GDGT) lipids are ubiquitous throughout the marine environment and are preserved in sediments and sedimentary rocks on million-year timescales. Variations in the number of ring-containing GDGT isomers in sediments correlate with differences in overlying sea surface temperatures, a relationship formalized in the TEX86 paleotemperature proxy. Ammonia-oxidizing Thaumarchaeota are believed to be the major sources of these GDGTs, implying that the greatest production and export of GDGTs from the water column should be associated with the maximum expression of ammonia monooxygenase (amoA) genes and maximum number of thaumarchaeal cells, both of which occur in the subsurface NO2- maximum near a depth of ca. 80-250 m. To examine the relationship between production and export of GDGTs from the water column, we measured the concentrations and δ13C values of GDGTs in suspended particulate matter (SPM) of the western South Atlantic Ocean and compared them to values from pure thaumarchaeal cultures and from available sediment core-tops from other locations. Thaumarchaeota are believed to fix the majority of their carbon directly from dissolved inorganic carbon (DIC). However, both the SPM and core-top δ13C values in some cases are moderately more 13C-depleted than would be predicted based on the 13C content of local DIC and the previously-published biosynthetic isotope fractionation (ɛ). This indicates that the average metabolism of the planktonic archaeal community either is mixotrophic (≥ 25% organic carbon assimilation) or that the published ɛ value for the model organism Nitrosopumilus maritimus may not be representative of the total autotrophic community. In addition to this offset, δ13C values of GDGTs in SPM inversely mirror DIC profiles, with lowest values in the nitrite maximum and higher values in the deeper water column, similar to the overall trends for bulk SPM. Finally, while individual GDGTs in SPM samples have similar δ13C values, in many sediments measured to date, the isotopic composition of individual GDGTs differs. This implies that multiple sources of GDGTs are required to explain core-top 13C distributions, especially on continental margins.

Transport of sludge-derived organic pollutants to deep-sea sediments at deep water dump site 106

USGS Publications Warehouse

Takada, H.; Farrington, J.W.; Bothner, Michael H.; Johnson, C.G.; Tripp, B.W.

1994-01-01

Linear alkylbenzenes (LABs), coprostanol and epi-coprostanol, were detected in sediment trap and bottom sediment samples at the Deep Water Dump Site 106 located 185 km off the coast of New Jersey, in water depths from 2400 to 2900 m. These findings clearly indicate that organic pollutants derived from dumped sludge are transported through the water column and have accumulated on the deep-sea floor. No significant difference in LABs isomeric composition was observed among sludge and samples, indicating little environmental biodegradation of these compounds. LABs and coprostanol have penetrated down to a depth of 6 cm in sediment, indicating the mixing of these compounds by biological and physical processes. Also, in artificially resuspended surface sediments, high concentrations of LABs and coprostanols were detected, implying that sewage-derived organic pollutants initially deposited on the deep-sea floor can be further dispersed by resuspension and transport processes. Small but significant amounts of coprostanol were detected in the sediment from a control site at which no LABs were detected. The coprostanol is probably derived from feces of marine mammals and sea birds and/or from microbial or geochemical transformations of cholesterol. Polcyclic aromatic hydrocarbons (PAHs) in sediment trap samples from the dump site were largely from the sewage sludge and had a mixed petroleum and pyrogenic composition. In contrast, PAHs in sediments in the dump site were mainly pyrogenic; contributed either from sewage sludge or from atmospheric transport to the overlying waters. & 1994 American Chemical Society.

Resuspension of Polychlorinated BiPhenyl-contaminated Field Sediment: Release to the Water Column and Determination of Site-Specific Kdoc

EPA Science Inventory

Sediments from the New Bedford Harbor (NBH) U.S. Environmental Protection Agency (U.S. EPA) Superfund site (Massachusetts, USA), contaminated with polychlorinated biphenyls (PCBs), were resuspended under different water column redox conditions: untreated, oxidative, and reductive...

Particulate export vs lateral advection in the Antarctic Polar Front (Southern Pacific Ocean)

NASA Astrophysics Data System (ADS)

Tesi, T.; Langone, L.; Ravaioli, M.; Capotondi, L.; Giglio, F.

2012-04-01

The overarching goal of our study was to describe and quantify the influence of lateral advection relative to the vertical export in the Antarctic Polar Front (Southern Pacific Ocean). In areas where lateral advection of particulate material is significant, budgets of bioactive elements can be inaccurate if fluxes through the water column and to the seabed are exclusively interpreted as passive sinking of particles. However, detailed information on the influence of lateral advection in the water column in the southern ocean is lacking. With this in mind, our study focused between the twilight zone (i.e. mesopelagic) and the benthic nepheloid layer to understand the relative importance of lateral flux with increasing water depth. Measurements were performed south of the Antarctic Polar Front for 1 year (January 10th 1999-January 3rd 2000) at 900, 1300, 2400, and 3700 m from the sea surface. The study was carried out using a 3.5 km long mooring line instrumented with sediment traps, current meters and sensors of temperature and conductivity. Sediment trap samples were characterized via several parameters including total mass flux, elemental composition (organic carbon, total nitrogen, biogenic silica, and calcium carbonate), concentration of metals (aluminum, iron, barium, and manganese), 210Pb activity, and foraminifera taxonomy. High fluxes of biogenic particles were observed in both summer 1999 and 2000 as a result of seasonal algal blooms associated with sea ice retreat and water column stratification. During no-productive periods, several high energy events occurred and resulted in advecting resuspended biogenic particles from flat-topped summits of the Pacific Antarctic Ridge. Whereas the distance between seabed and uppermost sediment traps was sufficient to avoid lateral advection processes, resuspension was significant in the lowermost sediment traps accounting for ~60 and ~90% of the material caught at 2400 and 3700 m, respectively. Samples collected during high energy events contained benthic foraminifera and exhibited significantly higher 210Pb activity indicating a longer residence time in the water column. In addition, during winter quiescent periods characterized by low mass fluxes, the content of lithogenic particles increased at the expenses of phytodetritus suggesting the presence of lateral advection of fine particles permanently in suspension within the benthic nepheloid layer. In spite of the low mass flux, organic matter content was particularly high during these periods accounting for almost 10% of the global pool of organic matter.

History of water-column anoxia in the Black Sea indicated by pyrite framboid size distributions

USGS Publications Warehouse

Wilkin, R.T.; Arthur, M.A.; Dean, W.E.

1997-01-01

A detailed study of size distributions of framboidal pyrite in Holocene Black Sea sediments establishes the timing of a change from deposition under an oxic water column to deposition under an anoxic and sulfidic water column. In the most recent carbonate-rich sediments (Unit I) and in the organic carbon-rich sapropel (Unit II), framboid size distributions are remarkably uniform (mean diameter= 5 ??m); over 95% of the framboids in Unit I and Unit II are < 7 ??m in diameter. These properties of framboidal pyrite are consistent with framboid nucleation and growth within an anoxic and sulfidic water column, followed by transport to the sediment-water interface, cessation of pyrite growth due to the exhaustion of reactive iron, and subsequent burial. In contrast, the organic carbon-poor sediments of lacustrine Unit III contain pyrite framboids that are generally much larger in size (mean diameter = 10 ??m). In Unit III, over 95% of the framboids are < 25 ??m in diameter, 40% of framboids are between 7 ??m and 25 ??m, and framboids up to 50 ??m in diameter are present. This distribution of sizes suggests framboid nucleation and growth within anoxic sediment porewaters. These new data on size distributions of framboidal pyrite confirm that the development of water-column anoxia in the Black Sea coincided with the initiation of deposition of laminated Unit II sapropels.

Transport and deposition of the fire biomarker levoglucosan across the tropical North Atlantic Ocean

NASA Astrophysics Data System (ADS)

Schreuder, Laura T.; Hopmans, Ellen C.; Stuut, Jan-Berend W.; Sinninghe Damsté, Jaap S.; Schouten, Stefan

2018-04-01

Biomass burning impacts biogeochemical cycling, vegetation dynamics and climate. However, interactions between fire, climate and vegetation are not well understood and therefore studies have attempted to reconstruct fire and vegetation history under different climatic conditions using sedimentary archives. Here we focus on levoglucosan, a thermal by-product of cellulose generated during biomass burning, and, therefore, a potential fire biomarker in the marine sedimentary archive. However, before levoglucosan can be applied as a biomass burning proxy in marine sediments, there is a need for studies on how levoglucosan is transported to the marine environment, how it is reflecting biomass burning on continents, as well as the fate of levoglucosan in the marine water column and during deposition in marine sediments. Here we present analyses of levoglucosan, using an improved Ultra High Pressure Liquid Chromatography-Electro Spray Ionization/High Resolution Mass Spectrometry (UHPLC-ESI/HRMS) method, in atmospheric particles, in particulate matter settling through the water column and in marine surface sediments on a longitudinal transect crossing the tropical North Atlantic Ocean at 12°N. Levoglucosan was detected in the atmosphere, although in low concentration, possibly due to the sampled particle size, the source area of the aerosols, or the short time interval of sampling by which large burning events may have been missed. In sinking particles in the tropical North Atlantic Ocean we find that levoglucosan deposition is influenced by a mineral ballast effect associated with marine biogenic particles, and that levoglucosan is not transported in association with mineral dust particles. Highest levoglucosan concentrations and seasonal differences in sinking particles were found close to continents and low concentrations and seasonal differences were found in the open ocean. Close to Africa, levoglucosan concentration is higher during winter, reflecting seasonal burning in northwestern Africa. However, close to South America levoglucosan concentrations appear to be affected by riverine transport from the Amazon River. In surface sediments close to South America, levoglucosan concentration is higher than in the middle of the Atlantic Ocean, implying that here the influence from the South American continent is important and perennial. Our study provides evidence that degradation of levoglucosan during settling in the marine water column is not substantial, but is substantial at the sediment-water interface. Nevertheless, levoglucosan was detected in all surface sediments throughout the tropical North Atlantic, indicating its presence in the marine sedimentary record, which reveals the potential for levoglucosan as a biomass burning proxy in marine sediments.

Influence of iron sulfides on abiotic oxidation of UO2 by nitrite and dissolved oxygen in natural sediments.

PubMed

Carpenter, Julian; Bi, Yuqiang; Hayes, Kim F

2015-01-20

Iron sulfide precipitates formed under sulfate reducing conditions may buffer U(IV) insoluble solid phases from reoxidation after oxidants re-enter the reducing zone. In this study, sediment column experiments were performed to quantify the effect of biogenic mackinawite on U(IV) stability in the presence of nitrite or dissolved oxygen (DO). Two columns, packed with sediment from an abandoned U contaminated mill tailings site near Rifle, CO, were biostimulated for 62 days with an electron donor (3 mM acetate) in the presence (BRS+) and absence (BRS−) of 7 mM sulfate. The bioreduced sediment was supplemented with synthetic uraninite (UO2(s)), sterilized by gamma-irradiation, and then subjected to a sequential oxidation by nitrite and DO. Biogenic iron sulfides produced in the BRS+ column, mostly as mackinawite, inhibited U(IV) reoxidation and mobilization by both nitrite and oxygen. Most of the influent nitrite (0.53 mM) exited the columns without oxidizing UO2, while a small amount of nitrite was consumed by iron sulfides precipitates. An additional 10-day supply of 0.25 mM DO influent resulted in the release of about 10% and 49% of total U in BRS+ and BRS– columns, respectively. Influent DO was effectively consumed by biogenic iron sulfides in the BRS+ column, while DO and a large U spike were detected after only a brief period in the effluent in the BRS– column.

Monitoring the extent of vertical and lateral movement of human decomposition products through sediment using cholesterol as a biomarker.

PubMed

Luong, Susan; Forbes, Shari L; Wallman, James F; Roberts, Richard G

2018-04-01

Due to the lack of human decomposition research facilities available in different geographical regions, the extent of movement of human decomposition products from a cadaver into various sedimentary environments, in different climates, has not been able to be studied in detail. In our study, a human cadaver was placed on the surface of a designated plot at the Australian Facility for Taphonomic Experimental Research (AFTER), the only human decomposition facility in Australia, where the natural process of decomposition was allowed to progress over 14days in the Australian summer. Sediment columns (approximately 1m deep) were collected at lateral distances of 0.25m, 0.5m, 1.0m and 2.5m in each of four directions from the centre of the torso. Plot elevation and weather data were also collected. Each sediment column was subdivided, dried and homogenised. A sample was isolated from each sediment subdivision, extracted with hexane, and the hexane extract cleaned with citrate buffer (pH 3), filtered and spiked with cholesterol-D 7 internal standard. After derivatisation with BSTFA+1% TMCS, cholesterol was monitored in the samples using targeted gas chromatography tandem mass spectrometry analysis. A positive result for decomposition products was given if the cholesterol abundance in the test sample was higher than that detected in the 'control' samples of a similar substrate type collected prior to cadaver placement. Within the confines of the experimental design and the measured parameters, lateral leaching was observed over distances of up to 2.5m from the centre of the torso, which was the maximum distance tested in the study. Vertical leaching was detected to depths of up to 49cm below the ground surface. Such data can aid the development of policies related to plot sizing and sediment renewal and regeneration at other human decomposition facilities and at cemeteries. The density and distribution of cholesterol surrounding the cadaver in this study can also help forensic investigators interpret cases involving remains that have been moved or scavenged. Copyright © 2018 Elsevier B.V. All rights reserved.

Evaluation of dredged material proposed for ocean disposal from Shark River Project area

DOE Office of Scientific and Technical Information (OSTI.GOV)

Antrim, L.D.; Gardiner, W.W.; Barrows, E.S.

1996-09-01

The objective of the Shark River Project was to evaluate proposed dredged material to determine its suitability for unconfined ocean disposal at the Mud Dump Site. Tests and analyses were conducted on the Shark River sediments. The evaluation of proposed dredged material consisted of bulk sediment chemical and physical analysis, chemical analyses of dredging site water and elutriate, water-column and benthic acute toxicity tests, and bioaccumulation tests. Individual sediment core samples collected from the Shark River were analyzed for grain size, moisture content, and total organic carbon (TOC). One sediment composite was analyzed for bulk density, specific gravity, metals, chlorinatedmore » pesticides, polychlorinated biphenyl (PCB) congeners, polynuclear aromatic hydrocarbons (PAHs), and 1,4- dichlorobenzene. Dredging site water and elutriate, prepared from suspended-particulate phase (SPP) of the Shark River sediment composite, were analyzed for metals, pesticides, and PCBs. Benthic acute toxicity tests and bioaccumulation tests were performed.« less

EFFECT OF REDOX ZONATION ON THE REDUCTIVE TRANSFORMATION OF P-CYANONITROBENZENE IN A LABORATORY SEDIMENT COLUMN

EPA Science Inventory

The reductive transformation of a model compound, p-cyanonitrobenzene (pCNB), was investigated in a laboratory sediment column that had been characterized with respect to redox zonation. Characterization of the redox zones was assessed by measurement of the solution phase concent...

Uncertainty and variability in laboratory derived sorption parameters of sediments from a uranium in situ recovery site

NASA Astrophysics Data System (ADS)

Dangelmayr, Martin A.; Reimus, Paul W.; Johnson, Raymond H.; Clay, James T.; Stone, James J.

2018-06-01

This research assesses the ability of a GC SCM to simulate uranium transport under variable geochemical conditions typically encountered at uranium in-situ recovery (ISR) sites. Sediment was taken from a monitoring well at the SRH site at depths 192 and 193 m below ground and characterized by XRD, XRF, TOC, and BET. Duplicate column studies on the different sediment depths, were flushed with synthesized restoration waters at two different alkalinities (160 mg/l CaCO3 and 360 mg/l CaCO3) to study the effect of alkalinity on uranium mobility. Uranium breakthrough occurred 25% - 30% earlier in columns with 360 mg/l CaCO3 over columns fed with 160 mg/l CaCO3 influent water. A parameter estimation program (PEST) was coupled to PHREEQC to derive site densities from experimental data. Significant parameter fittings were produced for all models, demonstrating that the GC SCM approach can model the impact of carbonate on uranium in flow systems. Derived site densities for the two sediment depths were between 141 and 178 μmol-sites/kg-soil, demonstrating similar sorption capacities despite heterogeneity in sediment mineralogy. Model sensitivity to alkalinity and pH was shown to be moderate compared to fitted site densities, when calcite saturation was allowed to equilibrate. Calcite kinetics emerged as a potential source of error when fitting parameters in flow conditions. Fitted results were compared to data from previous batch and column studies completed on sediments from the Smith-Ranch Highland (SRH) site, to assess variability in derived parameters. Parameters from batch experiments were lower by a factor of 1.1 to 3.4 compared to column studies completed on the same sediments. The difference was attributed to errors in solid-solution ratios and the impact of calcite dissolution in batch experiments. Column studies conducted at two different laboratories showed almost an order of magnitude difference in fitted site densities suggesting that experimental methodology may play a bigger role in column sorption behavior than actual sediment heterogeneity. Our results demonstrate the necessity for ISR sites to remove residual pCO2 and equilibrate restoration water with background geochemistry to reduce uranium mobility. In addition, the observed variability between fitted parameters on the same sediments highlights the need to provide standardized guidelines and methodology for regulators and industry when the GC SCM approach is used for ISR risk assessments.

Uncertainty and variability in laboratory derived sorption parameters of sediments from a uranium in situ recovery site.

PubMed

Dangelmayr, Martin A; Reimus, Paul W; Johnson, Raymond H; Clay, James T; Stone, James J

2018-06-01

This research assesses the ability of a GC SCM to simulate uranium transport under variable geochemical conditions typically encountered at uranium in-situ recovery (ISR) sites. Sediment was taken from a monitoring well at the SRH site at depths 192 and 193 m below ground and characterized by XRD, XRF, TOC, and BET. Duplicate column studies on the different sediment depths, were flushed with synthesized restoration waters at two different alkalinities (160 mg/l CaCO 3 and 360 mg/l CaCO 3 ) to study the effect of alkalinity on uranium mobility. Uranium breakthrough occurred 25% - 30% earlier in columns with 360 mg/l CaCO 3 over columns fed with 160 mg/l CaCO 3 influent water. A parameter estimation program (PEST) was coupled to PHREEQC to derive site densities from experimental data. Significant parameter fittings were produced for all models, demonstrating that the GC SCM approach can model the impact of carbonate on uranium in flow systems. Derived site densities for the two sediment depths were between 141 and 178 μmol-sites/kg-soil, demonstrating similar sorption capacities despite heterogeneity in sediment mineralogy. Model sensitivity to alkalinity and pH was shown to be moderate compared to fitted site densities, when calcite saturation was allowed to equilibrate. Calcite kinetics emerged as a potential source of error when fitting parameters in flow conditions. Fitted results were compared to data from previous batch and column studies completed on sediments from the Smith-Ranch Highland (SRH) site, to assess variability in derived parameters. Parameters from batch experiments were lower by a factor of 1.1 to 3.4 compared to column studies completed on the same sediments. The difference was attributed to errors in solid-solution ratios and the impact of calcite dissolution in batch experiments. Column studies conducted at two different laboratories showed almost an order of magnitude difference in fitted site densities suggesting that experimental methodology may play a bigger role in column sorption behavior than actual sediment heterogeneity. Our results demonstrate the necessity for ISR sites to remove residual pCO2 and equilibrate restoration water with background geochemistry to reduce uranium mobility. In addition, the observed variability between fitted parameters on the same sediments highlights the need to provide standardized guidelines and methodology for regulators and industry when the GC SCM approach is used for ISR risk assessments. Copyright © 2018 Elsevier B.V. All rights reserved.

The impact of road salt runoff on methanogens and other lacustrine prokaryotes

NASA Astrophysics Data System (ADS)

Sprague, E.; Dupuis, D.; Koretsky, C.; Docherty, K. M.

2017-12-01

Road salt deicers are widely used in regions that experience icy winters. The resulting saline runoff can negatively impact freshwater lake ecosystems. Saline runoff can cause density stratification, resulting in persistently anoxic hypolimnia. This may result in a shift in the structure of the hypolimnetic prokaryotic community, with potential increases in anaerobic and halotolerant taxa. Specifically, anoxia creates a habitat suitable for the proliferation of obligately anaerobic Archaeal methanogens. As a result, more persistent and expanded anoxic zones due to road salt runoff have the potential to increase hypolimnetic methane concentrations. If a portion of this methane is released to the atmosphere, it could be a currently uncharacterized contributor to atmospheric greenhouse gas emissions. This study examines two urban, eutrophic lakes with significant road salt influx and one rural, eutrophic lake with little road salt influx. All three lakes are located in southwest Michigan. Samples were taken from the water column at every meter at the deepest part of each lake, with a sample from the sediment-water interface, in May, August, and November 2016 and February 2017. The V4 and V5 hypervariable regions of the 16S rRNA gene in Bacteria and Archaea were amplified and sequenced using an Illumina MiSeq approach. Abundance of the mcrA gene, a marker for Archaeal methyl coenzyme A reductase, was quantified using qPCR. Water column methane levels, sediment methane production, water surface methane flux and a suite of supporting geochemical parameters were measured to determine changes in redox stratification in each lake and across seasons. Results indicate significant changes in the 16S rRNA-based community associated with depth, season, salinity and lake. Cyanobacteria, Actinobacteria, and Proteobacteria were among the phyla with the highest overall relative abundance. Sediment samples had more copies of the mcrA gene than the water column samples. In most seasons, hypolimnia in the urban lakes had 550 to 900 µM more methane and epilimnia had small but consistently higher concentrations of methane than the rural lake. These results indicate that road salt contamination can directly and indirectly affect prokaryotic communities and has the potential to increase methane release from lakes.

Mercury transport and bioaccumulation in riverbank communities of the Alvarado Lagoon System, Veracruz State, Mexico.

PubMed

Guentzel, Jane L; Portilla, Enrique; Keith, Katherine M; Keith, Edward O

2007-12-15

The Alvarado Lagoon System (ALS) is located within the Papaloapan River Basin in southern Veracruz, Mexico. The ALS is a shallow system (2 m) connected to the Gulf of Mexico through a narrow sea channel. There are a large number of riverbank communities within the ALS that are dependent upon its biological productivity for comestible and economic subsistence. The purpose of this project was to determine the levels of mercury in water, sediment, fish, and hair samples from within the Papaloapan River Basin and to characterize the risk of Hg exposure to the individuals that reside in these communities. Water and fish samples were collected during the wet (September 2005) and dry (March 2003 and 2005) seasons. Hair samples, dietary surveys, and sediment samples were obtained during the wet and dry seasons of 2005. Total Hg in the water column ranged from 1.0 to 12.7 ng/L. A strong correlation (R(2)=0.82; p<0.001) between total Hg and total suspended solids in the water column suggests that particulate matter is a transport mechanism for Hg within the lagoon system. Total Hg in the sediments ranged from 27.5 to 90.5 ng Hg/g dry weight with no significant difference between the 2005 wet and dry seasons. There was a mild, but significant, correlation between total Hg and % carbon for the March 2005 sediment samples (R(2)=0.435; p=0.020), suggesting that Hg is associated with organic matter on the solid phase. Concentrations of total Hg in fish and shellfish harvested from the ALS ranged from 0.01 to 0.35 microg Hg/g wet. The levels of total Hg in hair ranged from 0.10 to 3.36 microg Hg/g (n=47) and 58% of the samples were above 1.00 microg Hg/g. The findings from this study suggest that individuals who frequently consume fish and shell fish containing low levels of Hg (<0.3 microg/g) can accumulate low to moderate body burdens of Hg, as indicated by hair Hg concentrations>1.0 microg/g, and may be at risk for experiencing low dose mercury toxicity.

Flavins in Marine Sediments: A Potentially Ubiquitous Intermediary In Microbial Electron Transfer

NASA Astrophysics Data System (ADS)

Monteverde, D.; Sylvan, J. B.; Suffridge, C.; Berelson, W.; Sanudo-Wilhelmy, S. A.; Baronas, J. J.

2016-12-01

The flavins (riboflavin, flavin mononucleotide [FMN], flavin adenine dinucleotide [FA­­D]) are a class of organic compounds synthesized by organisms to assist in redox reactions. They represent the largest class of required coenzymes, rivaled only by iron in the number of unique enzymes they bind. In addition to internal use, cultured metal-reducing organisms such as Shewanella and Geobacter have been known to release flavins into the extracellular pool to aid in external electron transfer. So called "electron shuttles" can allow organisms to overcome unfavorable geochemical zonation by transferring electrons onto a relatively distant insoluble acceptor. Despite the extensive culture work, flavins have not been systematically measured in the environment. Here we present the first set of flavin profiles from the water column and pore waters of a marine environment. Samples were taken from San Pedro Basin, a 900 meter deep, silled basin, with high seasonal inputs of organic carbon, low bottom water oxygen concentrations, and laminated sediments - making it ideal to explore variations in sediment geochemical zonations. Dissolved flavin concentrations in the water column and pore waters collected from two cores were preconcentrated via solid phase extraction and measured via LC/MS. Flavin profiles are compared to a suite of geochemical parameters as well as sediment microbial 16s rRNA data. Preliminary results show that FMN is typically an order of magnitude higher concentration than riboflavin (800-300pM versus 100-50pM). Porewater concentrations were elevated over water column values for all analytes (ranging from 100-2000pM) and displayed an increasing trend with depth in both cores. This increasing trend correlated with a decrease in dissolved Fe (ranging from 160 µM in surface sediments to 65 µM at 40 cm) and shifts in microbial diversity from sediments shallower than 5 cm depth dominated by Delta- and Gammaproteobacteria to subsurface sediments dominated by Chloroflexi and Archaea at 20-40 cm. These first environmental profiles of flavins in the marine environmental support previous observations of the importance of electron transfer intermediaries in culture and point to an important role for flavins in modern marine microbial communities.

Carotenoids in the Gulf of Gdansk sediments- useful markers of environmental conditions in the past

NASA Astrophysics Data System (ADS)

Krajewska, Magdalena; Szymczak-Żyła, Małgorzata; Kowalewska, Grażyna

2017-04-01

Carotenoids are a large group of natural compounds widespread in the aquatic environment. Most of carotenoids in sediments originate from phytoplankton, macroalgae, vascular plants and bacteria. Carotenoids undergo different reactions in water column and after deposition in sediments. Concentration and relative composition of pigments in sediments depend on such factors like primary production, phytoplankton taxonomy, sedimentation and accumulation rate, hydrological and post-depositional conditions. Because some pigments are unstable and can be degraded both by abiotic and biotic factors - in the presence of light, oxygen, herbivores or microorganisms activity, they provide information about conditions in water column and in sediments. They differ in stability and, due to that, carotenoids in marine sediments are indicators, not only of organic matter sources but also of pre- and post-depositional conditions. This work presents a concentration and distribution of selected carotenoids in recent (6 cores 0-20 cm) and deep (1 core, up to 400 cm) sediments of the Gulf of Gdansk- a highly eutrophic area of high primary production and high sedimentation rate. The sediments were collected during two cruises and analysed in framework of CLISED ('Climate Change Impact on Ecosystem Health- Marine Sediment Indicators') Polish- Norwegian research Project, grant no. 196128. Just after collection, the samples were frozen and kept in such a state until analysis in land laboratory. There, after extraction, carotenoids were analysed using high performance liquid chromatography (HPLC-DAD). Sediment age has been defined using C-14 dating. Sediments contained parent carotenoids, markers of the main phytoplankton groups occurring in the Baltic, e.g. diatoms, green algae and cyanobacteria. B-carotene in sediments is a better, averaged, marker of primary production than chlorophyll- a and similarly stable one as sum of chloropigments-a. Presentation will focus on cyanobacteria and their pigments record in sediments, because cyanobacterial blooms are good indicators of eutrophication and anaerobic conditions in the past. Carotenoids record in deep sediments was varied and there are periods of better or worse carotenoids preservation which proves climate changes.

Transport of U(VI) through sediments amended with phosphate to induce in situ uranium immobilization.

PubMed

Mehta, Vrajesh S; Maillot, Fabien; Wang, Zheming; Catalano, Jeffrey G; Giammar, Daniel E

2015-02-01

Phosphate amendments can be added to U(VI)-contaminated subsurface environments to promote in situ remediation. The primary objective of this study was to evaluate the impacts of phosphate addition on the transport of U(VI) through contaminated sediments. In batch experiments using sediments (<2 mm size fraction) from a site in Rifle, Colorado, U(VI) only weakly adsorbed due to the dominance of the aqueous speciation by Ca-U(VI)-carbonate complexes. Column experiments with these sediments were performed with flow rates that correspond to a groundwater velocity of 1.1 m/day. In the absence of phosphate, the sediments took up 1.68-1.98 μg U/g of sediments when the synthetic groundwater influent contained 4 μM U(VI). When U(VI)-free influents were then introduced with and without phosphate, substantially more uranium was retained within the column when phosphate was present in the influent. Sequential extractions of sediments from the columns revealed that uranium was uniformly distributed along the length of the columns and was primarily in forms that could be extracted by ion exchange and contact with a weak acid. Laser induced fluorescence spectroscopy (LIFS) analysis along with sequential extraction results suggest adsorption as the dominant uranium uptake mechanism. The response of dissolved uranium concentrations to stopped-flow events and the comparison of experimental data with simulations from a simple reactive transport model indicated that uranium adsorption to and desorption from the sediments was not always at local equilibrium. Copyright © 2014 Elsevier Ltd. All rights reserved.

Testing the Role of Microbial Ecology, Redox-Mediated Deep Water Production and Hypersalinity on TEX86: Lipids and 16s Sequences from Archaea and Bacteria in the Water Column and Sediments of Orca Basin

NASA Astrophysics Data System (ADS)

Warren, C.; Romero, I.; Ellis, G.; Goddard, E.; Krishnan, S.; Nigro, L. M.; Super, J. R.; Zhang, Y.; Zhuang, G.; Hollander, D. J.; Pagani, M.

2014-12-01

Mesophilic marine archaea and bacteria are known to substantially contribute to the oceanic microbial biomass and play critical roles in global carbon, nitrogen and nutrient cycles. The Orca Basin, a 2400 meter deep bathymetric depression on the continental slope of the north-central Gulf of Mexico, is an ideal environment to examine how redox-dependent biochemical processes control the input and cycling of bacterial and archaea-derived lipid compounds from formation in near-surface water, through secondary recycling processes operating at the redox-transition in the water column, to sedimentary diagenetic processes operating in oxic to anoxic zones within the basin. The lowermost 180 meters of the Orca Basin is characterized by an anoxic, hypersaline brine that is separated from the overlying oxic seawater by a well-defined redox sequence associated with a systematic increasing in salinity from 35 - 250‰. While surface water conditions are viewed as normal marine with a seasonally productive water column, the sub-oxic to anoxic transition zones within the deep-water column and the sediment spans over 200 m allowing the unique opportunity for discrete sampling of resident organisms and lipids. Here we present 16s rRNA sequence data of Bacteria and Archaea collected parallel to GDGT lipid profiles and in situ environmental measurements from the sediment and overlying water column in the intermediate zone of the basin, where movements of chemical transition zones are preserved. We evaluated GDGTs and corresponding taxa across the surface water, chlorophyll maximum, thermocline, and the deep redox boundary, including oxygenation, denitrification, manganese, iron and sulfate reduction zones, to determine if GDGTs are being produced under these conditions and how surface-derived GDGT lipids and the TEX86 signal may be altered. The results have implications for the application of the TEX86 paleotemperature proxy.

Biodegradation of 17β-estradiol, estrone, and testosterone in stream sediments

USGS Publications Warehouse

Bradley, P.M.; Chapelle, F.H.; Barber, L.B.; McMahon, P.B.; Gray, J.L.; Kolpin, D.W.

2009-01-01

The release of endocrine-disrupting chemicals (EDCs) in wastewater treatment plant (WWTP) effluent poses a significant threat to the ecology of surface water receptors, due to impacts on the hormonal control, sexual development, reproductive success and community structure of the indigenous aquatic organisms and associated wildlife. Among the EDCs commonly observed in WWTP effluent, the natural [e.g., 17??-estradiol (E2) and estrone (E1)] and synthetic [e.g., ethynylestradiol (EE2)] estrogens are particular concerns owing to their high endocrine reactivity in both in vitro and in vivo laboratory models. These reproductive hormones have been identified as the primary cause of estrogenic effects in wastewater effluent, with greater than 95% of the estrogen receptor agonist activity in effluent attributed to this contaminant group. The potentials for in situ biodegradation of 17??-estradiol (E2), estrone (E1), and testosterone (T) were investigated in three, hydrologically-distinct, WWTP-impacted streams in the United States. Relative differences in the mineralization of [4-14C] substrates were assessed in oxic microcosms containing sediment or water-only from locations upstream and downstream of the WWTP outfall in each system. Upstream samples provided insight into the biodegradative potential of sediment microbial communities that were not under the immediate impact of WWTP effluent. Upstream sediment from all three systems demonstrated significant mineralization of the "A" ring of E2, E1 and T, with the potential of T biodegradation consistently greater than of E2 and no systematic difference in the potentials of E2 and E1. Downstream samples provided insight into the impacts of effluent on reproductive hormone biodegradation. Significant "A" ring mineralization was also observed in downstream sediment, with the potentials for E1 and T mineralization being substantially depressed relative to upstream samples. In marked contrast, the potentials for E2 mineralization immediately downstream of the WWTP outfalls were more than double that of upstream samples. E2 mineralization was also observed in water, albeit at insufficient rate to prevent substantial downstream transport in the water column. The results of this study indicate that, in combination with sediment sorption processes which effectively scavenge hydrophobic contaminants from the water column and immobilize them in the vicinity of the WWTP outfall, aerobic biodegradation of reproductive hormones can be an environmentally important mechanism for nonconservative (destructive) attenuation of hormonal endocrine disruptors in effluent-impacted streams.

Dynamic fractionation of trace metals in soil and sediment samples using rotating coiled column extraction and sequential injection microcolumn extraction: a comparative study.

PubMed

Rosende, Maria; Savonina, Elena Yu; Fedotov, Petr S; Miró, Manuel; Cerdà, Víctor; Wennrich, Rainer

2009-09-15

Dynamic fractionation has been recognized as an appealing alternative to conventional equilibrium-based sequential extraction procedures (SEPs) for partitioning of trace elements (TE) in environmental solid samples. This paper reports the first attempt for harmonization of flow-through dynamic fractionation using two novel methods, the so-called sequential injection microcolumn (SIMC) extraction and rotating coiled column (RCC) extraction. In SIMC extraction, a column packed with the solid sample is clustered in a sequential injection system, while in RCC, the particulate matter is retained under the action of centrifugal forces. In both methods, the leachants are continuously pumped through the solid substrates by the use of either peristaltic or syringe pumps. A five-step SEP was selected for partitioning of Cu, Pb and Zn in water soluble/exchangeable, acid-soluble, easily reducible, easily oxidizable and moderately reducible fractions from 0.2 to 0.5 g samples at an extractant flow rate of 1.0 mL min(-1) prior to leachate analysis by inductively coupled plasma-atomic emission spectrometry. Similarities and discrepancies between both dynamic approaches were ascertained by fractionation of TE in certified reference materials, namely, SRM 2711 Montana Soil and GBW 07311 sediment, and two real soil samples as well. Notwithstanding the different extraction conditions set by both methods, similar trends of metal distribution were in generally found. The most critical parameters for reliable assessment of mobilizable pools of TE in worse-case scenarios are the size-distribution of sample particles, the density of particles, the content of organic matter and the concentration of major elements. For reference materials and a soil rich in organic matter, the extraction in RCC results in slightly higher recoveries of environmentally relevant fractions of TE, whereas SIMC leaching is more effective for calcareous soils.

Passive sampling methods for contaminated sediments: Risk assessment and management

PubMed Central

Greenberg, Marc S; Chapman, Peter M; Allan, Ian J; Anderson, Kim A; Apitz, Sabine E; Beegan, Chris; Bridges, Todd S; Brown, Steve S; Cargill, John G; McCulloch, Megan C; Menzie, Charles A; Shine, James P; Parkerton, Thomas F

2014-01-01

This paper details how activity-based passive sampling methods (PSMs), which provide information on bioavailability in terms of freely dissolved contaminant concentrations (Cfree), can be used to better inform risk management decision making at multiple points in the process of assessing and managing contaminated sediment sites. PSMs can increase certainty in site investigation and management, because Cfree is a better predictor of bioavailability than total bulk sediment concentration (Ctotal) for 4 key endpoints included in conceptual site models (benthic organism toxicity, bioaccumulation, sediment flux, and water column exposures). The use of passive sampling devices (PSDs) presents challenges with respect to representative sampling for estimating average concentrations and other metrics relevant for exposure and risk assessment. These challenges can be addressed by designing studies that account for sources of variation associated with PSMs and considering appropriate spatial scales to meet study objectives. Possible applications of PSMs include: quantifying spatial and temporal trends in bioavailable contaminants, identifying and evaluating contaminant source contributions, calibrating site-specific models, and, improving weight-of-evidence based decision frameworks. PSM data can be used to assist in delineating sediment management zones based on likelihood of exposure effects, monitor remedy effectiveness, and, evaluate risk reduction after sediment treatment, disposal, or beneficial reuse after management actions. Examples are provided illustrating why PSMs and freely dissolved contaminant concentrations (Cfree) should be incorporated into contaminated sediment investigations and study designs to better focus on and understand contaminant bioavailability, more accurately estimate exposure to sediment-associated contaminants, and better inform risk management decisions. Research and communication needs for encouraging broader use are discussed. Integr Environ Assess Manag 2014;10:224–236. © 2014 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of SETAC. PMID:24343931

The effect of bioturbation by Lumbriculus variegatus on transport and distribution of lead in a freshwater microcosm.

PubMed

Blankson, Emmanuel R; Klerks, Paul L

2016-05-01

The present study investigated the effect of bioturbation by the oligochaete worm Lumbriculus variegatus on the transport and environmental distribution of lead (Pb). Experiments used L. variegatus at densities of 0 ind./m(2), 2093 ind./m(2), and 8372 ind./m(2), in freshwater microcosms with Pb-spiked sediment. At the end of the 14-d experiment, Pb levels in the water column, tissues of L. variegatus, and sediment were determined, and bioturbation was quantified using luminophores. The bioturbation by L. variegatus increased Pb transport from the sediment to the water column. However, it did not significantly affect Pb bioaccumulation by L. variegatus or Pb levels in the sediment. The biodiffusion coefficient (Db) was positively related to worm density, but did not differ between Pb-spiked sediment and uncontaminated sediment. The latter finding suggests that Pb at the 100 μg/g concentration used in the present study did not affect L. variegatus bioturbation. The present study shows that bioturbation can enhance Pb transfer across the sediment-water interface and thus enhance Pb availability to organisms in the water column. © 2015 SETAC.

Evaluation of dredged material proposed for ocean disposal from Bronx River Project Area, New York

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gruendell, B.D.; Gardiner, W.W.; Antrim, L.D.

1996-12-01

The objective of the Bronx River project was to evaluate proposed dredged material from the Bronx River project area in Bronx, New York, to determine its suitability for unconfined ocean disposal at the Mud Dump Site. Bronx River was one of five waterways that the US Army Corps of Engineers-New York District (USAGE-NYD) requested the Battelle Marine Sciences Laboratory (MSL) to sample and to evaluate for dredging and disposal. Sediment samples were submitted for physical and chemical analyses, chemical analyses of dredging site water and elutriate, benthic and water-column acute toxicity tests, and bioaccumulation studies. Fifteen individual sediment core samplesmore » collected from the Bronx River project area were analyzed for grain size, moisture content, and total organic carbon (TOC). One composite sediment sample, representing the entire reach of the area proposed for dredging, was analyzed for bulk density, specific gravity, metals, chlorinated pesticides, polychlorinated biphenyl (PCB) congeners, polynuclear aromatic hydrocarbons (PAH), and 1,4- dichlorobenzene. Dredging site water and elutriate water, which was prepared from the suspended-particulate phase (SPP) of the Bronx River sediment composite, were analyzed for metals, pesticides, and PCBS.« less

RECOVERY, A Mathematical Model to Predict the Temporal Response of Surface Water to Contaminated Sediments.

DTIC Science & Technology

1994-11-01

NewEngl d U.S. Art RAYo WAERAYaEPRIENCSATO Incudebilio grapicr•efe "M ( p prgam) 3dCOeTt L -E nv i Eroa BORpR of E. Nw Y ri.ARm E er Wter...constant = 8.206 x 10.5 atm m3/(gmole-kelvins) T = absolute temperature, kelvins. A temperature of 298K (25 °C) is assumed in the model. The parameter...bottom sediment material are shown in Table 3. Table 2 Concentrations of DDE and Lindane In Water Column Sampling Day DDE, ppt, X ± SD Undane, ppt, X

40 CFR 230.61 - Chemical, biological, and physical evaluation and testing.

Code of Federal Regulations, 2011 CFR

2011-07-01

... potential effects on the water column and on communities of aquatic organisms. (1) Evaluation of chemical... be obtained from bioassays in lieu of chemical tests. (2) Water column effects. (i) Sediments... locations within the sediment. An elutriate test may be used to predict the effect on water quality due to...

40 CFR 230.61 - Chemical, biological, and physical evaluation and testing.

Code of Federal Regulations, 2010 CFR

2010-07-01

... potential effects on the water column and on communities of aquatic organisms. (1) Evaluation of chemical... be obtained from bioassays in lieu of chemical tests. (2) Water column effects. (i) Sediments... locations within the sediment. An elutriate test may be used to predict the effect on water quality due to...

Prediction of E. coli release from streambed to water column during base flow periods using SWAT model

USDA-ARS?s Scientific Manuscript database

Microbial water quality in streams is of importance for recreation, irrigation, and other uses. The streambed sediment has been shown to harbor large fecal indicator bacteria (FIB) population that can be released to water column during high-flow events when sediments are resuspended. There have been...

Relations of benthic macroinvertebrates to concentrations of trace elements in water, streambed sediments, and transplanted bryophytes and stream habitat conditions in nonmining and mining areas of the upper Colorado River basin, Colorado, 1995-98

USGS Publications Warehouse

Mize, Scott V.; Deacon, Jeffrey R.

2002-01-01

Intensive mining activity and highly mineralized rock formations have had significant impacts on surface-water and streambed-sediment quality and aquatic life within the upper reaches of the Uncompahgre River in western Colorado. A synoptic study by the U.S. Geological Survey National Water-Quality Assessment Program was completed in the upper Uncompahgre River Basin in 1998 to better understand the relations of trace elements (with emphasis on aluminum, arsenic, copper, iron, lead, and zinc concentrations) in water, streambed sediment, and aquatic life. Water-chemistry, streambed-sediment, and benthic macroinvertebrate samples were collected during low-flow conditions between October 1995 and July 1998 at five sites on the upper Uncompahgre River, all downstream from historical mining, and at three sites in drainage basins of the Upper Colorado River where mining has not occurred. Aquatic bryophytes were transplanted to all sites for 15 days of exposure to the water column during which time field parameters were measured and chemical water-quality and benthic macroinvertebrate samples were collected. Stream habitat characteristics also were documented at each site. Certain attributes of surface-water chemistry among streams were significantly different. Concentrations of total aluminum, copper, iron, lead, and zinc in the water column and concentrations of dissolved aluminum, copper, and zinc were significantly different between nonmining and mining sites. Some sites associated with mining exceeded Colorado acute aquatic-life standards for aluminum, copper, and zinc and exceeded Colorado chronic aquatic-life standards for aluminum, copper, iron, lead, and zinc. Concentrations of copper, lead, and zinc in streambed sediments were significantly different between nonmining and mining sites. Generally, concentrations of arsenic, copper, lead, and zinc in streambed sediments at mining sites exceeded the Canadian Sediment Quality Guidelines probable effect level (PEL), except at two mining sites where concentrations of copper and zinc were below the PEL. Concentrations of arsenic, copper, iron, and lead in transplanted bryophytes were significantly different between nonmining and mining sites. Bioconcentration factors calculated for 15-day exposure using one-half of the minimum reporting level were significantly different between nonmining and mining sites. In general, concentrations of trace elements in streambed sediment and transplanted bryophytes were more closely correlated than were the concentrations of trace elements in the water column with streambed sediments or concentrations in the water column with transplanted bryophytes. Stream habitat was rated as optimal to suboptimal using the U.S. Environmental Protection Agency Rapid Bioassessment Protocols for all sites in the study area. Generally, stream habitat conditions were similar at nonmining compared to mining sites and were suitable for diverse macroinvertebrate communities. All study sites had optimal instream habitat except two mining sites with suboptimal instream habitat because of disturbances in stream habitat. The benthic macroinvertebrate community composition at nonmining sites and mining sites differed. Mining sites had significantly lower total abundance of macroinvertebrates, fewer numbers of taxa, and lower dominance of Ephemeroptera (mayflies), Plecoptera (stoneflies), and Trichoptera (caddisflies), and a larger percentage of tolerant species than did nonmining sites. The predominance of Baetis sp. (mayflies), Hydropsychidae (caddisflies), and large percentage of Orthocladiinae chironomids (midges) at mining sites indicated that these species may be tolerant to elevated trace-element concentrations. The absence of Heptageniidae (mayflies), Chloroperlidae (stoneflies), and Rhyacophila sp. (caddisflies) at mining sites indicated that these species may be sensitive to elevated trace-element concentrations. Comparison of field parameters and

Bacterial transport in heterogeneous porous media: Observations from laboratory experiments

NASA Astrophysics Data System (ADS)

Silliman, S. E.; Dunlap, R.; Fletcher, M.; Schneegurt, M. A.

2001-11-01

Transport of bacteria through heterogeneous porous media was investigated in small-scale columns packed with sand and in a tank designed to allow the hydraulic conductivity to vary as a two-dimensional, lognormally distributed, second-order stationary, exponentially correlated random field. The bacteria were Pseudomonas ftuorescens R8, a strain demonstrating appreciable attachment to surfaces, and strain Ml, a transposon mutant of strain R8 with reduced attachment ability. In bench top, sand-filled columns, transport was determined by measuring intensity of fluorescence of stained cells in the effluent or by measuring radiolabeled cells that were retained in the sand columns. Results demonstrated that strain Ml was transported more efficiently than strain R8 through columns packed with either a homogeneous silica sand or a more heterogeneous sand with iron oxide coatings. Two experiments conducted in the tank involved monitoring transport of bacteria to wells via sampling from wells and sample ports in the tank. Bacterial numbers were determined by direct plate count. At the end of the first experiment, the distribution of the bacteria in the sediment was determined by destructive sampling and plating. The two experiments produced bacterial breakthrough curves that were quite similar even though the similarity between the two porous media was limited to first- and second-order statistical moments. This result appears consistent with the concept of large-scale, average behavior such as has been observed for the transport of conservative chemical tracers. The transported bacteria arrived simultaneously with a conservative chemical tracer (although at significantly lower normalized concentration than the tracer). However, the bacterial breakthrough curves showed significant late time tailing. The concentrations of bacteria attached to the sediment surfaces showed considerably more spatial variation than did the concentrations of bacteria in the fluid phase. This contrast between behavior in the fluid phase and on the solids is consistent with field observations by other authors and initial modeling of these heterogeneous media.

Spatial variability of surface-sediment porewater pH and related water-column characteristics in deep waters of the northern South China Sea

NASA Astrophysics Data System (ADS)

Shao, Changgao; Sui, Yi; Tang, Danling; Legendre, Louis

2016-12-01

This study analyzes the pH of surface-sediment porewater (i.e. 2-3 cm below the water-sediment interface), and concentrations of CaCO3 and organic carbon (OC) in 1192 sediment cores from the northern South China Sea, in water depths ranging from 137 to 3702 m. This is the first study in the literature to analyze the large-scale spatial variability of deep-water surface-sediment pH over a large ocean basin. The data showed strong spatial variations in pH. The lowest pH values (<7.3) were observed south of Hainan Island, an area that is affected by summer upwelling and freshwater runoff from the Pearl and Red Rivers. Moderately low pH values (generally 7.3-7.5) occurred in two other areas: a submarine canyon, where sediments originated partly from the Pearl River and correspond to a paleo-delta front during the last glacial period; and southwest of Taiwan Island, where waters are affected by the northern branch of the Kuroshio intrusion current (KIC) and runoff from Taiwan rivers. The surface sediments with the highest pH (⩾7.5, and up to 8.3) were located in a fourth area, which corresponded to the western branch of the KIC where sediments have been intensively eroded by bottom currents. The pH of surface-sediment porewater was significantly linearly related to water depth, bottom-water temperature, and CaCO3 concentration (p < 0.05 for the whole sampling area). This study shows that the pH of surface-sediment porewater can be sensitive to characteristics of the overlying water column, and suggests that it will respond to global warming as changes in surface-ocean temperature and pH progressively reach deeper waters.

Coupled Geochemical Impacts of Leaking CO2 and Contaminants from Subsurface Storage Reservoirs on Groundwater Quality

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shao, Hongbo; Qafoku, Nikolla; Lawter, Amanda R.

2015-07-07

The leakage of CO2 and the concomitant saline solutions from deep storage reservoirs to overlying groundwater aquifers is considered one of the major potential risks associated with geologic CO2 sequestration (GCS). Batch and column experiments were conducted to determine the fate of trace metals in groundwater in the scenarios of CO2 and metal contaminated brine leakage. The sediments used in this work were collected from an unconsolidated sand and gravel aquifer in Kansas, and contained 0-4 wt% carbonates. Cd and As were spiked into the reaction system to represent potential contaminants from the reservoir brine that could intrude into groundwatermore » aquifers with leaking CO2 at initial concentrations of 114 and 40 ppb, respectively. Through this research we demonstrated that Cd and As were adsorbed on the sediments, in spite of the lowered pH due to CO2 dissolution in the groundwater. Cd concentrations were well below its MCL in both batch and column studies, even for sediment samples without detectable carbonate to buffer the pH. Arsenic concentrations in the effluent were also significantly lower than influent concentration, suggesting that the sediments tested have the capacity to mitigate the coupled adverse effects of CO2 leakage and brine intrusion. However, the mitigation capacity of sediment is a function of its geochemical properties [e.g., the calcite content; the presence of adsorbed As(III); and the presence of P in the natural sediment]. The competitive adsorption between phosphate and arsenate may result in higher concentrations of As in the aqueous phase.« less

Anthropogenic tritium in the Loire River estuary, France

NASA Astrophysics Data System (ADS)

Péron, O.; Gégout, C.; Reeves, B.; Rousseau, G.; Montavon, G.; Landesman, C.

2016-12-01

This work is carried out in the frame of a radioecological monitoring of anthropogenic tritium from upstream and downstream of several nuclear power plants along the Loire River to its estuary. This paper studies the variation of anthropogenic tritium species in the Loire River system from upstream to the mouth of the estuary. Tritiated water (HTO and HTO in sediment pore water) and organically bound tritium (OBT) forms were analysed after dedicated pre-treatments. The collected environmental samples consist in (i) surface-sediment and core samples from the river floor, (ii) surface and water column samples. A maximum 3H activity concentration of 26 ± 3 Bq·L- 1 in the Loire River estuary is obtained whereas an environmental background level around 1 Bq·L- 1 is determined for a non influenced continental area by anthropogenic activities. The European follow-up indicator used as a screening value is 100 Bq·L- 1. The conservative tritium behaviour was used in order to characterize the tidal regime and river flow influences in the mixing zone of the Loire River estuary. Furthermore, OBT levels and total organically carbon (TOC) content are explored. Finally, ratios of OBT relative to HTO in sediment pore water in surface-sediment and core samples are also discussed.

Linking geology and microbiology: inactive pockmarks affect sediment microbial community structure.

PubMed

Haverkamp, Thomas H A; Hammer, Øyvind; Jakobsen, Kjetill S

2014-01-01

Pockmarks are geological features that are found on the bottom of lakes and oceans all over the globe. Some are active, seeping oil or methane, while others are inactive. Active pockmarks are well studied since they harbor specialized microbial communities that proliferate on the seeping compounds. Such communities are not found in inactive pockmarks. Interestingly, inactive pockmarks are known to have different macrofaunal communities compared to the surrounding sediments. It is undetermined what the microbial composition of inactive pockmarks is and if it shows a similar pattern as the macrofauna. The Norwegian Oslofjord contains many inactive pockmarks and they are well suited to study the influence of these geological features on the microbial community in the sediment. Here we present a detailed analysis of the microbial communities found in three inactive pockmarks and two control samples at two core depth intervals. The communities were analyzed using high-throughput amplicon sequencing of the 16S rRNA V3 region. Microbial communities of surface pockmark sediments were indistinguishable from communities found in the surrounding seabed. In contrast, pockmark communities at 40 cm sediment depth had a significantly different community structure from normal sediments at the same depth. Statistical analysis of chemical variables indicated significant differences in the concentrations of total carbon and non-particulate organic carbon between 40 cm pockmarks and reference sample sediments. We discuss these results in comparison with the taxonomic classification of the OTUs identified in our samples. Our results indicate that microbial communities at the sediment surface are affected by the water column, while the deeper (40 cm) sediment communities are affected by local conditions within the sediment.

A primer on trace metal-sediment chemistry

USGS Publications Warehouse

Horowitz, Arthur J.

1985-01-01

In most aquatic systems, concentrations of trace metals in suspended sediment and the top few centimeters of bottom sediment are far greater than concentrations of trace metals dissolved in the water column. Consequently, the distribution, transport, and availability of these constituents can not be intelligently evaluated, nor can their environmental impact be determined or predicted solely through the sampling and analysis of dissolved phases. This Primer is designed to acquaint the reader with the basic principles that govern the concentration and distribution of trace metals associated with bottom and suspended sediments. The sampling and analysis of suspended and bottom sediments are very important for monitoring studies, not only because trace metal concentrations associated with them are orders of magnitude higher than in the dissolved phase, but also because of several other factors. Riverine transport of trace metals is dominated by sediment. In addition, bottom sediments serve as a source for suspended sediment and can provide a historical record of chemical conditions. This record will help establish area baseline metal levels against which existing conditions can be compared. Many physical and chemical factors affect a sediment's capacity to collect and concentrate trace metals. The physical factors include grain size, surface area, surface charge, cation exchange capacity, composition, and so forth. Increases in metal concentrations are strongly correlated with decreasing grain size and increasing surface area, surface charge, cation exchange capacity, and increasing concentrations of iron and manganese oxides, organic matter, and clay minerals. Chemical factors are equally important, especially for differentiating between samples having similar bulk chemistries and for inferring or predicting environmental availability. Chemical factors entail phase associations (with such sedimentary components as interstitial water, sulfides, carbonates, and organic matter) and ways in which the metals are entrained by the sediments (such as adsorption, complexation, and within mineral lattices).

Effects of remediation amendments on vadose zone microorganisms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Hannah M.; Tilton, Fred A.

2012-08-10

Surfactant-based foam delivery technology has been studied to remediate Hanford 200 area deep vadose zone sediment. However, the surfactants and remediation amendments have an unknown effect on indigenous subsurface microorganisms. Microbial populations are important factors to consider in remediation efforts due to their potential to alter soil geochemistry. This project focuses on measuring microbial metabolic responses to remediation amendments in batch and column studies using Deep Vadose Zone Sediments. Initial studies of the microbes from Hanford 200 area deep vadose zone sediment showed surfactants sodium dodecyl sulfate (SDS) and cocamidopropyl betaine (CAPB) and remediation amendment calcium polysulfide (CPS) had nomore » affect on microbial growth using BiologTM Ecoplates. To move towards a more realistic field analog, soil columns were packed with Hanford 200 Area sediment. Once microbial growth in the column was verified by observing growth of the effluent solution on tryptic soy agar plates, remedial surfactants were injected into the columns, and the resulting metabolic diversity was measured. Results suggest surfactant sodium dodecyl sulfate (SDS) stimulates microbial growth. The soil columns were also visualized using X-ray microtomography to inspect soil packing and possibly probe for evidence of biofilms. Overall, BiologTM Ecoplates provide a rapid assay to predict effects of remediation amendments on Hanford 200 area deep vadose zone microorganisms.« less

Detection of recycled marine sediment components in crater lake fluids using 129I

NASA Astrophysics Data System (ADS)

Fehn, U.; Snyder, G. T.; Varekamp, J. C.

2002-06-01

Crater lakes provide time-integrated samples of volcanic fluids, which may carry information on source components. We tested under what circumstances 129I concentrations can be used for the detection of a signal derived from the recycling of marine sediments in subduction zone magmatism. The 129I system has been successfully used to determine origin and pathways in other volcanic fluids, but the application of this system to crater lakes is complicated by the presence of anthropogenic 129I, related to recent nuclear activities. Results are reported from four crater lakes, associated with subducting crust varying in age between 23 and 98 Ma. The 129I/I ratios determined for Copahue, Argentina, (129I/I=700×10-15) and White Island, New Zealand, (129I/I=284×10-15) demonstrate the presence of iodine in the crater lakes that was derived from recycled marine sediments. A comparison to the ages of the subducted sediments in these two cases indicates that the ratios likely reflect iodine remobilization from the entire sediment column that was undergoing subduction. While the 129I signals in Poás and Rincón de la Vieja, Costa Rica also demonstrate the presence of recycled iodine, the relatively high percentage of meteoric water in these lakes prevents a reliable determination of source ages. The observed high concentrations of iodine and 129I/I ratios substantially below current surface values strongly argue for the presence of recycled marine components in the arc magmas of all four cases. Components from subducted marine sediments can be quantified and related to specific parts of the sediment column in cases where the iodine concentration in the lake waters exceeds 5 μM.

Biological and physical controls on the flux and characteristics of sinking particles on the Northwest Atlantic margin

NASA Astrophysics Data System (ADS)

Hwang, Jeomshik; Manganini, Steven J.; Park, JongJin; Montluçon, Daniel B.; Toole, John M.; Eglinton, Timothy I.

2017-06-01

matter characteristics and radiocarbon contents of organic carbon (OC) were examined on sinking particle samples intercepted at three nominal depths of 1000 m, 2000 m, and 3000 m (˜50 m above the seafloor) during a 3 year sediment trap program on the New England slope in the Northwest Atlantic. We have sought to characterize the sources of sinking particles in the context of vertical export of biogenic particles from the overlying water column and lateral supply of resuspended sediment particles from adjacent margin sediments. High aluminum (Al) abundances and low OC radiocarbon contents indicated contributions from resuspended sediment which was greatest at 3000 m but also significant at shallower depths. The benthic source (i.e., laterally supplied resuspended sediment) of opal appears negligible based on the absence of a correlation with Al fluxes. In comparison, CaCO3 fluxes at 3000 m showed a positive correlation with Al fluxes. Benthic sources accounted for 42 ˜ 63% of the sinking particle flux based on radiocarbon mass balance and the relationship between Al flux and CaCO3 flux. Episodic pulses of Al at 3000 m were significantly correlated with the near-bottom current at a nearby hydrographic mooring site, implying the importance of current variability in lateral particle transport. However, Al fluxes at 1000 m and 2000 m were coherent but differed from those at 3000 m, implying more than one mode of lateral supply of particles in the water column.

Fertilizers mobilization in alluvial aquifer: laboratory experiments

NASA Astrophysics Data System (ADS)

Mastrocicco, M.; Colombani, N.; Palpacelli, S.

2009-02-01

In alluvial plains, intensive farming with conspicuous use of agrochemicals, can cause land pollution and groundwater contamination. In central Po River plain, paleo-channels are important links between arable lands and the underlaying aquifer, since the latter is often confined by clay sediments that act as a barrier against contaminants migration. Therefore, paleo-channels are recharge zones of particular interest that have to be protected from pollution as they are commonly used for water supply. This paper focuses on fertilizer mobilization next to a sand pit excavated in a paleo-channel near Ferrara (Italy). The problem is approached via batch test leaking and columns elution of alluvial sediments. Results from batch experiments showed fast increase in all major cations and anions, suggesting equilibrium control of dissolution reactions, limited availability of solid phases and geochemical homogeneity of samples. In column experiments, early elution and tailing of all ions breakthrough was recorded due to preferential flow paths. For sediments investigated in this study, dispersion, dilution and chemical reactions can reduce fertilizers at concentration below drinking standards in a reasonable time frame, provided fertilizer loading is halted or, at least, reduced. Thus, the definition of a corridor along paleo-channels is recommended to preserve groundwater quality.

Suspending sediment transport, sedimentation, and resuspension in Lake Houston, Texas: Implications for water quality

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matty, J.M.; Anderson, J.B.; Dunbar, R.B.

1987-01-01

Lake Houston is a man-made reservoir located northeast of Houston, Texas. The purpose of this investigation was to document suspended sediment transport, sedimentation, and resuspension in the lake with a view towards estimating the influence of sedimentation on water quality. Sediment traps were placed in strategic locations in the lake to collect suspended sediments. Samples were analyzed for bulk density, grain size, organic carbon, and a number of trace elements. These data were analyzed along with meteorological data to examine those factors which regulate suspended sediment input and dispersal, and the role of suspended sediments in controlling water quality withinmore » the lake. Sediment input to the lake depends primarily on the intensity of rainfall in the watershed. Sediment movement within the lake is strongly influenced by wave activity, which resuspends sediments from shallow areas, and by wind-driven circulation. The increased residence time of suspended sediments due to resuspension allows greater decomposition of organic matter and the release of several trace elements from sediments to the water column. Virtually all samples from sediment traps suspended between 1 and 5 m above the lake bottom contain medium to coarse silt, and even some very fine sand-sized material. This implies that circulation in Lake Houston is periodically intense enough to transport this size material in suspension. During winter, northerly winds with sustained velocities of greater than 5 m/sec provide the most suitable condition for rapid (< 1 d) transport of suspended sediment down the length of the lake. Fluctuations in current velocities and the subsequent suspension/deposition of particles may explain variations in the abundance of coliform bacteria in Lake Houston.« less

Passive sampling methods for contaminated sediments: Scientific rationale supporting use of freely dissolved concentrations

PubMed Central

Mayer, Philipp; Parkerton, Thomas F; Adams, Rachel G; Cargill, John G; Gan, Jay; Gouin, Todd; Gschwend, Philip M; Hawthorne, Steven B; Helm, Paul; Witt, Gesine; You, Jing; Escher, Beate I

2014-01-01

Passive sampling methods (PSMs) allow the quantification of the freely dissolved concentration (Cfree) of an organic contaminant even in complex matrices such as sediments. Cfree is directly related to a contaminant's chemical activity, which drives spontaneous processes including diffusive uptake into benthic organisms and exchange with the overlying water column. Consequently, Cfree provides a more relevant dose metric than total sediment concentration. Recent developments in PSMs have significantly improved our ability to reliably measure even very low levels of Cfree. Application of PSMs in sediments is preferably conducted in the equilibrium regime, where freely dissolved concentrations in the sediment are well-linked to the measured concentration in the sampler via analyte-specific partition ratios. The equilibrium condition can then be assured by measuring a time series or a single time point using passive samplers with different surface to volume ratios. Sampling in the kinetic regime is also possible and generally involves the application of performance reference compounds for the calibration. Based on previous research on hydrophobic organic contaminants, it is concluded that Cfree allows a direct assessment of 1) contaminant exchange and equilibrium status between sediment and overlying water, 2) benthic bioaccumulation, and 3) potential toxicity to benthic organisms. Thus, the use of PSMs to measure Cfree provides an improved basis for the mechanistic understanding of fate and transport processes in sediments and has the potential to significantly improve risk assessment and management of contaminated sediments. Integr Environ Assess Manag 2014;10:197–209. © 2014 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of SETAC. PMID:24288295

Strontium and cesium release mechanisms during unsaturated flow through waste-weathered Hanford sediments.

PubMed

Chang, Hyun-Shik; Um, Wooyong; Rod, Kenton; Serne, R Jeff; Thompson, Aaron; Perdrial, Nicolas; Steefel, Carl I; Chorover, Jon

2011-10-01

Leaching behavior of Sr and Cs in the vadose zone of Hanford site (Washington) was studied with laboratory-weathered sediments mimicking realistic conditions beneath the leaking radioactive waste storage tanks. Unsaturated column leaching experiments were conducted using background Hanford pore water focused on first 200 pore volumes. The weathered sediments were prepared by 6 months reaction with a synthetic Hanford tank waste leachate containing Sr and Cs (10(-5) and 10(-3) molal representative of LO- and HI-sediment, respectively) as surrogates for (90)Sr and (137)Cs. The mineral composition of the weathered sediments showed that zeolite (chabazite-type) and feldspathoid (sodalite-type) were the major byproducts but different contents depending on the weathering conditions. Reactive transport modeling indicated that Cs leaching was controlled by ion-exchange, while Sr release was affected primarily by dissolution of the secondary minerals. The later release of K, Al, and Si from the HI-column indicated the additional dissolution of a more crystalline mineral (cancrinite-type). A two-site ion-exchange model successfully simulated the Cs release from the LO-column. However, a three-site ion-exchange model was needed for the HI-column. The study implied that the weathering conditions greatly impact the speciation of the secondary minerals and leaching behavior of sequestrated Sr and Cs.

Life Under the Ice: Spatial and Temporal Patterns in Rates of Water Column and Sediment Respiration in 5 Alaskan Arctic Lakes

NASA Astrophysics Data System (ADS)

Sadro, S.; MacIntyre, S.

2014-12-01

Alaskan arctic lakes lay covered by up to three meters of ice and snow for approximately two-thirds of the year, yet comparatively little is known about their ecosystem metabolism during this period. We combined the use of free-water measurements of dissolved oxygen (DO) and the laboratory incubation of sediment cores to characterize spatial and temporal patterns in the ecosystem respiration (ER) of five arctic lakes spanning a gradient in size from 1 to 150 ha. Seasonal rates of ER throughout the water column ranged from < 0.001 to 0.034 mg L-1 h-1; sediment ER ranged from mg 6.1 m-2 h-1 to 50.7 mg m-2 h-1. Although there were significant differences in sediment ER among lakes, average water column ER did not differ significantly. Seasonal patterns of DO draw down were most often linear. However, within the water column above the deepest basin of each lake, rates were higher during autumn - winter than winter - spring, with the lowest rates typically found in the upper 70% of the water column and the highest rates near the bottom. ER measured near the bottom along the slope of lake basins was lower than that at the center of lake basins and closer in magnitude to water column ER. Spatial patters in free-water rates were reflected by sediment ER, which was 21 - 66 % higher in cores collected from the deepest point of lake basins than in sediments collected at shallower locations found at the margin of basins. These observations suggest that two mechanisms operating in tandem account for the higher apparent rates of DO drawdown found within lake basins during the winter. Higher local rates of sediment ER and, similar to observations in other lakes, the transport of DO depleted waters from lake margins to deep basins. Together they contribute to the formation of hypoxia in the deeper basins of lakes and the concentration of other respiratory products, with important implications for energy flow within lakes and carbon budgets across the arctic.

Cesium migration in saturated silica sand and Hanford sediments as impacted by ionic strength.

PubMed

Flury, Markus; Czigány, Szabolcs; Chen, Gang; Harsh, James B

2004-07-01

Large amounts of 137Cs have been accidentally released to the subsurface from the Hanford nuclear site in the state of Washington, USA. The cesium-containing liquids varied in ionic strengths, and often had high electrolyte contents, mainly in the form of NaNO3 and NaOH, reaching concentrations up to several moles per liter. In this study, we investigated the effect of ionic strengths on Cs migration through two types of porous media: silica sand and Hanford sediments. Cesium sorption and transport was studied in 1, 10, 100, and 1000 mM NaCl electrolyte solutions at pH 10. Sorption isotherms were constructed from batch equilibrium experiments and the batch-derived sorption parameters were compared with column breakthrough curves. Column transport experiments were analyzed with a two-site equilibrium-nonequilibrium model. Cesium sorption to the silica sand in batch experiments showed a linear sorption isotherm for all ionic strengths, which matched well with the results from the column experiments at 100 and 1000 mM ionic strength; however, the column experiments at 1 and 10 mM ionic strength indicated a nonlinear sorption behavior of Cs to the silica sand. Transport through silica sand occurred under one-site sorption and equilibrium conditions. Cesium sorption to Hanford sediments in both batch and column experiments was best described with a nonlinear Freundlich isotherm. The column experiments indicated that Cs transport in Hanford sediments occurred under two-site equilibrium and nonequilibrium sorption. The effect of ionic strength on Cs transport was much more pronounced in Hanford sediments than in silica sands. Effective retardation factors of Cs during transport through Hanford sediments were reduced by a factor of 10 when the ionic strength increased from 100 to 1000 mM; for silica sand, the effective retardation was reduced by a factor of 10 when ionic strength increased from 1 to 1000 mM. A two order of magnitude change in ionic strength was needed in the silica sand to observe the same change in Cs retardation as in Hanford sediments. Copyright 2003 Elsevier B.V.

Methods of analysis by the U.S. Geological Survey National Water Quality Laboratory : determination of polycyclic aromatic hydrocarbon compounds in sediment by gas chromatography/mass spectrometry

USGS Publications Warehouse

Olson, Mary C.; Iverson, Jana L.; Furlong, Edward T.; Schroeder, Michael P.

2004-01-01

A method for the determination of 28 polycyclic aromatic hydrocarbons (PAHs) and 25 alkylated PAH homolog groups in sediment samples is described. The compounds are extracted from sediment by solvent extraction, followed by partial isolation using high-performance gel permeation chromatography. The compounds are identified and uantitated using capillary-column gas chromatography/mass spectrometry. The report presents performance data for full-scan ion monitoring. Method detection limits in laboratory reagent matrix samples range from 1.3 to 5.1 micrograms per kilogram for the 28 PAHs. The 25 groups of alkylated PAHs are homologs of five groups of isomeric parent PAHs. Because of the lack of authentic standards, these homologs are reported semiquantitatively using a response factor from a parent PAH or a specific alkylated PAH. Precision data for the alkylated PAH homologs are presented using two different standard reference manuals produced by the National Institute of Standards and Technology: SRM 1941b and SRM 1944. The percent relative standard deviations for identified alkylated PAH homolog groups ranged from 1.55 to 6.98 for SRM 1941b and from 6.11 to 12.0 for SRM 1944. Homolog group concentrations reported under this method include the concentrations of individually identified compounds that are members of the group. Organochlorine (OC) pesticides--including toxaphene, polychlorinated biphenyls (PCBs), and organophosphate (OP) pesticides--can be isolated simultaneously using this method. In brief, sediment samples are centrifuged to remove excess water and extracted overnight with dichloromethan (95 percent) and methanol (5 percent). The extract is concentrated and then filtered through a 0.2-micrometer polytetrafluoroethylene syringe filter. The PAH fraction is isolated by quantitatively injecting an aliquot of sample onto two polystyrene-divinylbenzene gel-permeation chromatographic columns connected in series. The compounds are eluted with dichloromethane, a PAH fraction is collected, and a portion of the coextracted interferences, including elemental sulfur, is separated and discarded. The extract is solvent exchanged, the volume is reduced, and internal standard is added. Sample analysis is completed using a gas chromatograph/mass spectrometer and full-scan acquisition.

CO2 System Permeable Sediment Chemistry and Modeling of It's Behavior Under Rising temperature and Ocean Acidification

NASA Astrophysics Data System (ADS)

Drupp, P. S.; De Carlo, E. H.; Guidry, M.; Mackenzie, F. T.

2016-02-01

Porewater was collected from highly permeable, carbonate-rich, sandy sediments at two locations, CRIMP-2 and Ala Wai, on coral reefs on Oahu, Hawaii. Samples were collected at the sediment-water interface and from porewater wells installed at sediment depths of 2, 4, 6, 8, 12, 16, 20, 30, 40, and 60 cm. Total alkalinity and dissolved inorganic carbon were enriched, relative to the overlying water column, and ratios of TA:DIC at the two sites (0.80 and 0.93) suggest that aerobic respiration and sulfate reduction - both coupled with carbonate mineral dissolution - in the oxic and anoxic layers, respectively, are the major controls on the biogeochemistry of the porewater-sediment system. The porewater was approaching thermodynamic saturation with respect to aragonite and was found to be undersaturated with respect to all phases of magnesian calcite containing greater than 12 mol% MgCO3. In addition to microbial controls on porewater diagenesis, transient physical events in the water column, such as swells and changing bottom current speeds, appear to exert a strong influence on the porewater chemistry due to the highly permeable and porous nature of the sediments. Profiles collected before and after swell events at each location show an apparent flushing of the porewater system, replacing low pH, high DIC interstitial waters with seawater from the overlying water column. Using this data, along with data collected in numerous prior studies, a CO2-carbonic acid system biogeochemical box model of the barrier reef flat of Kaneohe Bay, Oahu was developed in order to determine how increasing DIC of the open ocean source waters due to rising anthropogenic CO2 emissions and ocean acidification affects the CaCO3 budget of coral reef systems. This 17-box model was forced using the Representative Concentration Pathway (RCP) scenarios that predict CO2 atmospheric concentrations and temperature anomalies out to 2100. Model outputs predict a decrease in net ecosystem carbonate production, although the reef does not reach a state of net erosion by 2100. This dual approach allows for a better understanding of how sediment porewaters, sediments, and reef frameworks will respond to anthropogenic changes over the next century and provides valuable insight into the threshold when coral reefs could switch from net accretion to net erosion.

Liquid chromatography-atmospheric pressure photoionization-Orbitrap analysis of fullerene aggregates on surface soils and river sediments from Santa Catarina (Brazil).

PubMed

Sanchís, Josep; Oliveira, Luis Felipe Silva; de Leão, Felipe Baptista; Farré, Marinella; Barceló, Damià

2015-02-01

In the present work, a new analytical approach is proposed for the analysis of seven fullerenes (C₆₀, C₇₀, N-methylfulleropyrrolidine, [6,6]-phenyl C₆₁ butyric acid methyl ester, [6,6]-thienyl C61 butyric acid methyl ester, C60 pyrrolidine tris-acid ethyl ester and [6,6]-phenyl C₇₁ butyric acid methyl ester fullerenes) in soils and sediments. This procedure combines an ultrasound-assisted solvent extraction (UAE) with toluene followed by liquid chromatography (LC), using a pyrenylpropyl group bonded silica based column, coupled to a high-resolution mass spectrometer (HRMS) using atmospheric pressure photoionisation (APPI) in negative ion mode. The analytical performance for fullerene separation of the pyrenylpropyl group bonded silica column was compared to the C18 column. For the ultra-trace analysis of fullerenes in complex environmental samples, the use of the APPI source and the use of the electrospray ionisation (ESI) source were compared. Using this approach for the analysis of fullerenes in complex matrices, a series of advantages, in terms of sensitivity and specificity, have been demonstrated. The method limits of detection (MLOD) and the method limits of quantification (MLOQ) in soils and sediments ranged from 0.022 to 0.39 pg/g and from 0.072 to 1.3 pg/g, respectively. Recoveries were between 68 and 106%. The analytical method was applied in order to assess the occurrence of selected fullerenes in 45 soils of Sul Catarinense (Santa Catalina State, Brazil) and 15 sediments from the Tubarão River, presenting different pressures of contamination: a coal-combustion power plant, car exhaust, coal mining industry and wastewater effluents. C₆₀ and C₇₀ fullerenes have been detected at concentrations ranging from the MLOD to 0.150 ng/g. None of the functionalised fullerenes were detected in any of the samples. Combustion processes, in particular car exhaust, were identified as the main source of fullerenes. However, the potential degradation of residual concentrations of engineered fullerenes to more stable forms, such as C₆₀ and C₇₀, should also be considered. Copyright © 2014 Elsevier B.V. All rights reserved.

Guidance for Subaqueous Dredged Material Capping.

DTIC Science & Technology

1998-06-01

from Ambrose Channel , over the contaminated sediments. At least two intermediate sur- veys and additional capping were required before capping was...organisms to a given bioturbation depth; reducing contami- nant flux rates to achieve specific sediment, pore water, or water column target...bathymetry, bottom slopes, cur- rents, water depths, water column density stratification, erosion/accretion trends, proximity to navigation channels

Calculating the Diffusive Flux of Persistent Organic Pollutants between Sediments and the Water Column on the Palos Verdes Shelf Superfund Site using Polymeric Passive Samplers

EPA Science Inventory

Passive samplers were used to determine water concentrations of persistent organic pollutants (POPs) in the surface sediments and near-bottom water of a marine Superfund site on the Palos Verdes Shelf, California, USA. Measured concentrations in the porewater and water column at...

Intense molybdenum accumulation in sediments underneath a nitrogenous water column and implications for the reconstruction of paleo-redox conditions based on molybdenum isotopes

NASA Astrophysics Data System (ADS)

Scholz, Florian; Siebert, Christopher; Dale, Andrew W.; Frank, Martin

2017-09-01

The concentration and isotope composition of molybdenum (Mo) in sediments and sedimentary rocks are widely used proxies for anoxic conditions in the water column of paleo-marine systems. While the mechanisms leading to Mo fixation in modern restricted basins with anoxic and sulfidic (euxinic) conditions are reasonably well constrained, few studies have focused on Mo cycling in the context of open-marine anoxia. Here we present Mo data for water column particulate matter, modern surface sediments and a paleo-record covering the last 140,000 years from the Peruvian continental margin. Mo concentrations in late Holocene and Eemian (penultimate interglacial) shelf sediments off Peru range from ∼70 to 100 μg g-1, an extent of Mo enrichment that is thought to be indicative of (and limited to) euxinic systems. To investigate if this putative anomaly could be related to the occasional occurrence of sulfidic conditions in the water column overlying the Peruvian shelf, we compared trace metal (Mo, vanadium, uranium) enrichments in particulate matter from oxic, nitrate-reducing (nitrogenous) and sulfidic water masses. Coincident enrichments of iron (Fe) (oxyhydr)oxides and Mo in the nitrogenous water column as well as co-variation of dissolved Fe and Mo in the sediment pore water suggest that Mo is delivered to the sediment surface by Fe (oxyhydr)oxides. Most of these precipitate in the anoxic-nitrogenous water column due to oxidation of sediment-derived dissolved Fe with nitrate as a terminal electron acceptor. Upon reductive dissolution in the surface sediment, a fraction of the Fe and Mo is re-precipitated through interaction with pore water sulfide. The Fe- and nitrate-dependent mechanism of Mo accumulation proposed here is supported by the sedimentary Mo isotope composition, which is consistent with Mo adsorption onto Fe (oxyhydr)oxides. Trace metal co-variation patterns as well as Mo and nitrogen isotope systematics suggest that the same mechanism of Mo delivery caused the 'anomalously' high interglacial Mo accumulation rates in the paleo-record. Our findings suggest that Fe- and nitrate-dependent Mo shuttling under nitrogenous conditions needs to be considered a possible reason for sedimentary Mo enrichments during past periods of widespread anoxia in the open ocean.

Three-Dimensional Quantification of Pore Space in Flocculated Sediments

NASA Astrophysics Data System (ADS)

Lawrence, Tom; Spencer, Kate; Bushby, Andy; Manning, Andrew

2017-04-01

Flocculated sediment structure plays a vital role in determining sediment dynamics within the water column in fresh and saline water bodies. The porosity of flocs contributes to their specific density and therefore their settling characteristics, and can also affect settling characteristics via through-flow. The process of settling and resuspension of flocculated material causes the formation of larger and more complex individual flocs, about which little is known quantitatively of the internal micro-structure and therefore porosity. Hydrological and sedimentological modelling software currently uses estimations of porosity, because it is difficult to capture and analyse flocs. To combat this, we use a novel microscopy method usually performed on biological material to scan the flocs, the output of which can be used to quantify the dimensions and arrangement of pores. This involves capturing flocculated sediment, staining the sample with heavy metal elements to highlight organic content in the Scanning Electron Microscope later, and finally setting the sample in resin. The overall research aim is to quantitatively characterise the dimensions and distribution of pore space in flocs in three dimensions. In order to gather data, Scanning Electron Microscopy and micro-Computed Tomography have been utilised to produce the necessary images to identify and quantify the pore space. The first objective is to determine the dimensional limits of pores in the structure (i.e. what area do they encapsulate? Are they interconnected or discreet?). This requires a repeatable definition to be established, so that all floc pore spaces can be quantified using the same parameters. The LabSFLOC settling column and dyes will be used as one possible method of determining the outer limits of the discreet pore space. LabSFLOC is a sediment settling column that uses a camera to record the flocs, enabling analysis of settling characteristics. The second objective is to develop a reliable method for quantifying the dimensions of the pores. The dimensions to be quantified are the long- and short-axis lengths, measured using ImageJ. The third objective will be to quantify the distribution of the pore space within the structure, utilising point-to-point measurements and distance from centre of the floc, again utilising software capable of providing accurate measurements between the centres of each pore within the structure. Preliminary data demonstrating pore dimensional limits and quantification will be presented. This will establish a definition of pore space based on limits of interaction between pore water and the water column, including experimental data from LabSFLOC, and visual representations of pore outer limits. Further to this, I will include some investigational data from ImageJ relating to the dimensions being measured for sub-aim 2. This information is vital in providing accurate and reliable information for hydrological and sedimentological model input, ultimately increasing the value of the outputs.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brown, Christopher F.; Icenhower, Jonathan P.; Um, Wooyong

Geochemical tests provide evidence for the transit of a plume of caustic waste solution through the sediment column at the Hanford 241-B and -BX Tank Farms. Direct-push samples recovered from boreholes surrounding Tanks 241-B-110 and 241-BX-102 and related waste transfer lines and diversion boxes included sediments typical of those previously recovered from other localities on the Hanford Site. The Hanford formation sediments are dominantly quartzo-feldspathic sands strewn with lithic fragments, displaying a range of particle size distributions and sorting characteristics. Some moderately well-sorted, fine-grained lithologies are interpreted as lenticular bodies irregularly dispersed in coarser-grained, more poorly sorted sediments. Tier Imore » tests conducted on the vadose zone sediments revealed an inverse correlation between moisture content and sediment size fraction (i.e., there is greater moisture content in finer-grained sediments). The Tier I tests also showed that the pore water solutions were likely sodium-rich, moderately saline, and possessed higher pH values than background (untainted) sediments. These data are characteristic of sediments that have encountered sodium-rich, saline, caustic waste solution, as documented in other reports at other suspect contamination sites around Hanford. Analyses of solutions from 1:1 water extracts reveal relatively balanced cation and anion concentrations, indicating that most of the geochemical species have been accounted for. The water extract data for affected sediments also indicate unusually high concentrations of aluminum, iron, and phosphorus. The relatively high concentrations of aluminum and iron may be the result of dissolution of secondary amorphous phases that precipitated after a reactive plume partially dissolved aluminum- and iron-bearing phases as it migrated through the sediment column. On the other hand, the presence of elevated concentrations of phosphorous may be the tell-tale signature of wastes derived from the bismuth phosphate separation process. Elements typically mobile in the geosphere, such as technetium-99, are present at either low concentrations or are below the analytical detection limit. However, we expect that the mobile elements would be present mainly along a narrow plume front, and if this front had passed deeper into the sediment profile than depths sampled, the retention of these elements would be minor. On the other hand for the direct push sediments from around BX Tank Farm, uranium-238 was detected in nearly all sediment specimens (by acid extract experiments) at concentrations above the natural crustal average (0.763 pCi/g), and we also detected the presence of several anthropogenic radioisotopes, such as cobalt-60, cesium-137, europium-154, and europium-155 (by gamma energy analysis). These data are direct confirmation of contamination of the sediments.« less

Petroleum Hydrocarbon Profiles of Water and Sediment of Algoa Bay, Eastern Cape, South Africa

PubMed Central

Adeniji, Abiodun O.; Okoh, Omobola O.

2017-01-01

Petroleum hydrocarbon profiles of water and sediment samples of Algoa Bay in the Eastern Cape Province of South Africa were assessed using standard analytical procedures. Water (from surface and bottom levels) and sediment samples were collected from five locations in the bay from February to June 2016. Extraction of the petroleum hydrocarbons from the water and sediment samples collected was achieved using liquid-liquid and Soxhlet extraction techniques, respectively, followed by column clean up. Target compounds were analytically determined with gas chromatography–flame ionization detector (GC-FID) and quantified by integrating the areas of both the resolved and unresolved components. Physicochemical properties of the water samples were also determined on site using a SeaBird 19plusV2 CTD SBE 55 device. Estimated limit of detection, limit of quantitation and relative standard deviation for the 35 n-alkane standards ranged from 0.06 to 0.13 μg/L, 0.30 to 0.69 μg/L and 3.61 to 8.32%, respectively. Results showed that total petroleum hydrocarbon (TPH) varied from 45.07 to 307 μg/L in the water and 0.72 to 27.03 mg/kg in the sediments. The mean concentrations of TPH in both the water and sediment samples from Algoa Bay revealed a slight level of pollution. The diagnostic indices used showed that the hydrocarbons in the area were from both biogenic and anthropogenic sources. Hence, there is need for adequate regulation and control of all activities contributing to the levels of petroleum hydrocarbon in the marine environment for the safety of human, aquatic and wild lives in the area. PMID:29053634

Petroleum Hydrocarbon Profiles of Water and Sediment of Algoa Bay, Eastern Cape, South Africa.

PubMed

Adeniji, Abiodun O; Okoh, Omobola O; Okoh, Anthony I

2017-10-20

Petroleum hydrocarbon profiles of water and sediment samples of Algoa Bay in the Eastern Cape Province of South Africa were assessed using standard analytical procedures. Water (from surface and bottom levels) and sediment samples were collected from five locations in the bay from February to June 2016. Extraction of the petroleum hydrocarbons from the water and sediment samples collected was achieved using liquid-liquid and Soxhlet extraction techniques, respectively, followed by column clean up. Target compounds were analytically determined with gas chromatography-flame ionization detector (GC-FID) and quantified by integrating the areas of both the resolved and unresolved components. Physicochemical properties of the water samples were also determined on site using a SeaBird 19plusV2 CTD SBE 55 device. Estimated limit of detection, limit of quantitation and relative standard deviation for the 35 n -alkane standards ranged from 0.06 to 0.13 μg/L, 0.30 to 0.69 μg/L and 3.61 to 8.32%, respectively. Results showed that total petroleum hydrocarbon (TPH) varied from 45.07 to 307 μg/L in the water and 0.72 to 27.03 mg/kg in the sediments. The mean concentrations of TPH in both the water and sediment samples from Algoa Bay revealed a slight level of pollution. The diagnostic indices used showed that the hydrocarbons in the area were from both biogenic and anthropogenic sources. Hence, there is need for adequate regulation and control of all activities contributing to the levels of petroleum hydrocarbon in the marine environment for the safety of human, aquatic and wild lives in the area.

Subtropical freshwater storages: a major source of nitrous oxide and methane?

NASA Astrophysics Data System (ADS)

Sturm, Katrin; Grinham, Alistair; Yuan, Zhiguo

2013-04-01

Studies of greenhouse gas cycling in subtropical water bodies, particularly in the Southern Hemisphere, are very limited. This represents an important gap in our understanding of global emissions as the higher temperatures experienced in the subtropics will likely accelerate greenhouse gas production and consumption. Critical to understanding the net impact of these accelerated rates are detailed studies of representative systems within this region. In this paper we present a model artificial freshwater storage: Gold Creek Dam in South East Queensland, Australia. Freshwater storages are commonplace for drinking water and irrigation purposes in Australia as unpredictable rainfall patterns make river and ground water sources unreliable. Over 85 % of Australian rivers are modified with weirs and dams providing permanent inundation of previously terrestrial environments. The higher temperatures experienced at these latitudes drive thermal stratification of these systems as well as rapidly deoxygenate bottom waters. High organic matter availability in the sediment zone as well as the anoxic overlying water provide ideal conditions for reduced products (including methane and ammonia) from microbial processing to be formed and diffuse into bottom waters. A mid-water metalimnion is generally associated with large gradients in dissolved oxygen availability and reduced metabolites undergo oxidation prior to their emission from water surface. An intensive field study was undertaken to improve understanding of production and transformation rates of methane and nitrous oxide from the sediments, through the water column and to the atmosphere. Sediment nutrient (ammonia, nitrite/nitrate and filterable reactive phosphorus) and greenhouse gas (methane and nitrous oxide) porewater samples were collected at selected sites. To determine the magnitude of the benthic sediment contribution of methane and nitrous oxide to the water column sediment incubations were conducted in the laboratory. To determine the likely atmospheric flux from this water body surface floating chambers were used to collect gas. Results showed maximum methane concentrations in the sediment porewaters and deeper water column, both anoxic environments. However, nitrous oxide had highest concentrations at the oxycline zone of the water column. Sediment incubations showed clear methane efflux demonstrating the sediments to be a consistent source of methane. Sediments were either a source or sink of nitrous oxide depending on overlying dissolved oxygen concentration. Floating chamber incubations clearly demonstrated Gold Creek Dam was a source of both methane and nitrous oxide with methane an order of magnitude higher expressed as CO2 equivalents. Diffusive atmospheric fluxes of methane ranged from 20 to 450 mg m-2 d-1 and were comparable to tropical reservoirs rather than temperate reservoirs (LOUIS et al., 2000). Results are likely to be globally relevant as an increasing number of large dams are being constructed to meet growing water demand and under a warming climate process occurring in subtropical systems can give insights into future changes likely to occur in temperate systems.

Stochastic sediment property inversion in Shallow Water 06.

PubMed

Michalopoulou, Zoi-Heleni

2017-11-01

Received time-series at a short distance from the source allow the identification of distinct paths; four of these are direct, surface and bottom reflections, and sediment reflection. In this work, a Gibbs sampling method is used for the estimation of the arrival times of these paths and the corresponding probability density functions. The arrival times for the first three paths are then employed along with linearization for the estimation of source range and depth, water column depth, and sound speed in the water. Propagating densities of arrival times through the linearized inverse problem, densities are also obtained for the above parameters, providing maximum a posteriori estimates. These estimates are employed to calculate densities and point estimates of sediment sound speed and thickness using a non-linear, grid-based model. Density computation is an important aspect of this work, because those densities express the uncertainty in the inversion for sediment properties.

The hyperturbid state of the water column in estuaries and rivers: the importance of hindered settling

NASA Astrophysics Data System (ADS)

Dijkstra, Yoeri M.; Schuttelaars, Henk M.; Winterwerp, Johan C.

2018-03-01

Over the last few decades, some estuaries have undergone a transition to a hyperturbid state, characterised by suspended sediment concentrations of several grammes per litre averaged over the water column. To improve our understanding of this transition and of naturally hyperturbid estuaries, we systematically identify the processes allowing for high suspended sediment concentrations using a water column (1DV) model. Under a range of realistic forcing conditions, the state of the water column can be characterised by one of two equilibrium states. The first is an erosion-limited state, in which there still is sediment available for erosion at the bed. We find that this state only occurs with relatively low concentrations. The second is a supply-limited state, in which all erodable sediment is in suspension. The concentration in this state depends entirely on the amount of sediment in the system and can potentially be very high. We identify the conditions under which the state of the water column can jump from a low to a high concentration and identify hysteresis in the transition between the two states. The mechanism responsible for this hysteresis is hindered settling. It thus follows that hyperturbidity is only possible in a supply-limited state. From this observation we derive a necessary condition for an estuarine system to make the transition from low turbidity to hyperturbidity in a 1DV context. This is an important step towards understanding why some estuaries are hyperturbid and assessing the risk that particular estuaries may become hyperturbid in the future.

The relationship between land management, fecal indicator bacteria, and the occurrence of Campylobacter and Listeria spp. in water and sediments during synoptic sampling in the S. Fork Broad River Watershed, N.E. Georgia, U.S.A

NASA Astrophysics Data System (ADS)

Bradshaw, J. K.; Molina, M.; Sidle, R. C.; Sullivan, K.; Oakley, B.; Berrang, M.; Meinersmann, R.

2013-12-01

Fecal indicator bacteria (FIB) and pathogens stored in the bed sediments of streams and rivers may be mobilized into the water column affecting overall water quality. Furthermore, land management may play an important role in the concentrations of FIB and the occurrence of pathogens in stream water and sediments. The purpose of this study was to determine the relationship between FIB and pathogens in stream water and sediment based on three land management-affected categories: agricultural, forest, and waters receiving treated municipal wastewater. Two synoptic sampling events were conducted under baseflow conditions (<0.64 cm of rain within 24h) between October-November, 2012 and May-June, 2013. Counts of the E. coli and E. faecalis and occurrences of the enteric pathogens Campylobacter and Listeria spp. were measured in stream water and sediment samples collected at 15 locations (six agricultural (AG); six forested (FORS); and three receiving discharge from water pollution control plants (WPCP)) in the S. Fork Broad River watershed located in northeast Georgia, USA. Mean E. coli and E. faecalis concentrations were highest in the AG stream water samples (3.08 log MPN 100 mL -1 for E. coli and 3.07 log CFU 100 mL -1 for E. faecalis ) and lowest in the FORS water samples for E. coli (2.37 log MPN 100 mL -1 ) and WPCP water samples for E. faecalis (2.53 log CFU 100 mL -1 ). E. coli concentrations (2.74 log MPN 100 mL -1 ) in the WPCP streams were intermediate. Similar to water samples, E. coli concentrations were highest in the AG sediments (4.31 log MPN g -1 ), intermediate in the WPCP sediments (4.06 log MPN g -1 ), and lowest in the FORS sediments (3.46 log MPN g -1 ). In contrast to E. coli, E. faecalis concentrations were lower (1.10 to 1.31 log CFU g -1 ) and relatively more constant than E. coli in sediments over the three land management categories. Campylobacter was detected in 27% of the water samples and 8% of the sediment samples. The highest occurrence of Campylobacter detection was in the AG streams (15% of the water samples; 5% of the sediment samples). Listeria was detected in 76% of the water samples and 65% of the sediment samples. The FORS and AG streams had the highest occurrence of Listeria in water and sediment (32% and 29% of the water samples, respectively; 24% and 29% of sediment samples, respectively) suggesting Listeria is fairly ubiquitous in these streams. Based on the high concentrations of E. faecalis in water and E. coli in water and sediment, and higher frequency of Campylobacter detection in the AG streams, this study indicates that E. coli and Campylobacter may occur in high concentrations in stream sediments in land management areas where fecal material is deposited directly by livestock into the stream or adjacent land in large doses.

Particulate export and lateral advection in the Antarctic Polar Front (Southern Pacific Ocean): One-year mooring deployment

NASA Astrophysics Data System (ADS)

Tesi, T.; Langone, L.; Ravaioli., M.; Giglio, F.; Capotondi, L.

2012-12-01

An instrumented mooring line with sediment traps, current meters and recorders of temperature and conductivity was deployed just south of the Antarctic Polar Front (63° 26‧ S, 178° 03‧E; water depth 4400 m) from January 9th 1999 to January 10th 2000. Sediment traps at 900 and 3700 m had a single large cup to collect particulate material throughout the 1-year study whereas time-series sediment traps were used to characterize the temporal variability at 1300 and 2400 m. Samples were characterized via several parameters including total mass flux, elemental composition (organic carbon, total nitrogen, biogenic silica, and calcium carbonate), concentration of metals (aluminum, iron, barium, and manganese), 210Pb activity, and foraminifera identification. High vertical fluxes of biogenic particles were observed in both summer 1999 and 2000 as a result of seasonal algal blooms associated with sea ice retreat and water column stratification. During autumn and winter, several high energy events occurred and resulted in advecting resuspended biogenic particles from flat-topped summits of the Pacific Antarctic Ridge. Whereas the distance between seabed and uppermost sediment traps was sufficient to avoid lateral advection processes, resuspension was significant in the lowermost sediment traps accounting for ~ 60 and ~ 90% of the material caught at 2400 and 3700 m, respectively. Although resuspended material showed an elemental composition relatively similar to vertical summer fluxes, samples collected during high energy events contained benthic foraminifera and exhibited significantly higher 210Pb activity indicating a longer residence time in the water column. In addition, during quiescent periods characterized by low mass fluxes, the content of lithogenic particles increased at the expense of phytodetritus indicating the influence of material advected through the benthic nepheloid layer. Organic matter content was particularly high during these periods and showed statistically significant linear correlations with metals suggesting adsorption of organic coatings onto the mineral surface of lithogenic particles.

STRESS RESPONSE MODEL FOR THE TROPICAL SEAGRASS THALASSIA TESTUDINUM: THE INTERACTIONS OF LIGHT, TEMPERATURE, SEDIMENTATION AND GEOCHEMISTRY

EPA Science Inventory

Our modeling objective was to better define the relationship between a tropical seagrass and water-column and sediment stressors (i.e., light, organic and particle sedimentation, sediment nutrients and sulfides). The model was developed and optimized for sediments in Thalassia t...

Determination of physical and dynamic properties of suspended particles in water column with ultrasonic scanning in between the water surface and stable sediment layer.

NASA Astrophysics Data System (ADS)

Acar, Dursun; Alpar, Bedri; Ozeren, Sinan; Cagatay, Namık; Sari, Erol; Vardar, Denizhan; Eris, Kadir

2015-04-01

The behavior of seafloor sediment with its water column should be known against any occurrences of anoxic or oxic conditions. The most important ones of these conditions are possible leakage of natural gas or escape of liquids from sediment. On the basis of combined solid/liquid flow dynamics in sedimentation, such kind of events can change, even in an effective manner, the dynamic movements of molecules and their cumulative mass of particules, i.e. the suspended materials. The deployment of suitable sediment traps or ultrasonic transducers somewhere in the water column are not easy attempts in order to obtain useful information about the state of suspended materials during sedimentation. These are usually bulky instruments; therefore they may behave like an anti-move suppresser on the particles moving in the float direction, in oxic and anoxic manner. These instruments, on the other hand, may cover the effects of diffusive flow or bubble formed gas and fluid escape from the sediment surface into the water column. Ultrasonic scanners, however, are able to make observations in a remote manner, without affecting such artificial events. Our field trials were successfully completed at the historical estuary called Halic of Marmara sea . The physical properties; such as the velocity of particles, their travel directions, their dimensions and the ability to observe anti-compositor crushes of shock waves of the bubbles are only a few of these observations in natural ambience. The most important problem solved about water pressure during 3 atmosphere . The sensor has been tested successfully few times. We used the ''High voltage electric isolator oil filling'' to the inside of the scanner for pressure equalization between outer side and inner body of probe at a depth of (20 meters) beneath the sea surface . The transmitted signals by the planar crystal of the transducer become weaker under the pressure of overlying water column in depths. Our efforts are now focused on the improved performance of transducer at higher than over 3 atm pressure. Keywords: ultrasonic , flow , particle , Sediment , Cumulative mass

Fatty acid profiles of benthic environment associated with artificial reefs in subtropical Hong Kong.

PubMed

Cheung, Siu Gin; Wai, Ho Yin; Shin, Paul K S

2010-02-01

Artificial reefs can enhance habitat heterogeneity, especially in seabed degraded by bottom-dredging and trawling. However, the trophodynamics of such reef systems are not well understood. This study provided baseline data on trophic relationships in the benthic environment associated with artificial reefs in late spring and mid summer of subtropical Hong Kong, using fatty acid profiles as an indicator. Data from sediments collected at the reef base, materials from sediment traps deployed on top and bottom of the reefs, total particulate matter from the water column and oyster tissues from reef surface were subjected to principal component analysis. Results showed variations of fatty acid profiles in the total particulate matter, upper sediment trap and oyster tissue samples collected in the two samplings, indicating seasonal, trophodynamic changes within the reef system. The wastes produced by fish aggregating at the reefs can also contribute a source of biodeposits to the nearby benthic environment. Copyright 2009 Elsevier Ltd. All rights reserved.

Tropical Aquatic Archaea Show Environment-Specific Community Composition

PubMed Central

Silveira, Cynthia B.; Cardoso, Alexander M.; Coutinho, Felipe H.; Lima, Joyce L.; Pinto, Leonardo H.; Albano, Rodolpho M.; Clementino, Maysa M.; Martins, Orlando B.; Vieira, Ricardo P.

2013-01-01

The Archaea domain is ubiquitously distributed and extremely diverse, however, environmental factors that shape archaeal community structure are not well known. Aquatic environments, including the water column and sediments harbor many new uncultured archaeal species from which metabolic and ecological roles remain elusive. Some environments are especially neglected in terms of archaeal diversity, as is the case of pristine tropical areas. Here we investigate the archaeal composition in marine and freshwater systems from Ilha Grande, a South Atlantic tropical environment. All sampled habitats showed high archaeal diversity. No OTUs were shared between freshwater, marine and mangrove sediment samples, yet these environments are interconnected and geographically close, indicating environment-specific community structuring. Group II Euryarchaeota was the main clade in marine samples, while the new putative phylum Thaumarchaeota and LDS/RCV Euryarchaeota dominated freshwaters. Group III Euryarchaeota , a rare clade, was also retrieved in reasonable abundance in marine samples. The archaeal community from mangrove sediments was composed mainly by members of mesophilic Crenarchaeota and by a distinct clade forming a sister-group to Crenarchaeota and Thaumarchaeota. Our results show strong environment-specific community structuring in tropical aquatic Archaea, as previously seen for Bacteria. PMID:24086729

Interpreting the History of Lake Anoxia Using Iron and Sulfur Geochemistry

NASA Astrophysics Data System (ADS)

Ku, T.; Lozewski, J.; Ekdahl, E.; Teranes, J.

2004-05-01

Over the last thousand years, anthropogenic activities, such as land cultivation and atmospheric pollution, have increased the flux of growth-limiting nutrients to several North American lakes. The most common effect of this enhanced nutrient supply is a dramatic increase in the abundance of aquatic plants and algae. When these organisms die, the organic carbon in their remains falls through the water column and is oxidized by dissolved oxygen. Thus, eutrophic lakes are characterized by seasonally or permanently anoxic bottom waters because the rate of organic carbon oxidation exceeds the rate at which oxygen is replenished. The depletion of water column oxygen adversely affects lake ecosystems by decreasing water quality and by altering the community structure of fish and algae populations. In this study we examine the history of lake anoxia in two North American lakes, Half-Moon Lake in Michigan and Crawford Lake in Ontario. Sediment freeze cores and water column samples were taken from each site and both lakes contained well-preserved varved sediments. The sediments were analyzed for FeH (HCl-extractable iron), AVS (acid-volatile sulfur), CRS (chromium-reducible sulfur), d34S(CRS), CaCO3, CH2O, C/N, and d13C (CaCO3). Water samples were analyzed for pH, O2, cations, anions, and d34S(SO4). Today, Half-Moon Lake is seasonal anoxic while Crawford Lake has not overturned in the past ~15 years. Geochemical and biological data indicate that both lakes have experienced cultural eutrophication events in the 1800-1900s related to European-style agricultural practices. In addition, Crawford Lake experienced an earlier eutrophication episode around 1325 A.D. related to Iroquoian settlement of the area. Each eutrophication event showed an increase in the mass accumulation rate of pyritic sulfur, suggesting that sediments were exposed to longer durations of low-O2, H2S-rich waters during periods of cultural eutrophication. The geochemical parameter DOP (degree of pyritization) is defined as pyrite Fe/(pyrite Fe + FeH) and quantifies the fraction of iron that is converted into pyrite. DOP values from Half-Moon Lake are low (~0.1) prior to European settlement and increase to high values (>0.7) after European settlement. In Crawford Lake, our preliminary data indicate that the Iroquoian horizon has lower DOP values than the European horizon. This indicates that the water column was less sulfidic (more oxygen-rich) during the 1300s than in the 1800-1900s. These results show that Fe and S geochemistry can be used to document the history of lake anoxia.

High-density PhyloChip profiling of stimulated aquifer microbial communities reveals a complex response to acetate amendment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Handley, Kim M.; Wrighton, Kelly E.; Piceno, Y. M.

2012-06-13

There is increasing interest in harnessing the functional diversity of indigenous microbial communities to transform and remediate a wide range of environmental contaminants. Understanding the response of communities to stimulation, including flanking taxa, presents important opportunities for optimizing remediation approaches. We used high-density PhyloChip microarray analysis to comprehensively determine community membership and abundance patterns amongst a suite of samples from U(VI) bioremediation experiments. Samples were unstimulated or collected during Fe(III) and sulfate reduction from an acetate-augmented aquifer in Rifle, Colorado, and from laboratory experiments using field-collected materials. Results showed the greatest diversity in abundant SRB lineages was present in naturally-reducedmore » sediment. Desulfuromonadales and Desulfobacterales were consistently identified as the dominant Fe(III)- and sulfate-reducing bacteria (IRB and SRB) throughout acetate amendment experiments. Stimulated communities also exhibited a high degree of functional redundancy amongst enriched flanking members. Not surprisingly, competition for both sulfate and iron was evident amongst abundant taxa, but the distribution and abundance of these ancillary SRB (Peptococcaceae, Desulfovibrionales and Syntrophobacterales), and lineages containing IRB (excluding Desulfobacteraceae) was heterogeneous amongst sample types. Interesting, amongst the most abundant taxa, particularly during sulfate reduction, were Epsilonproteobacteria that perform microaerobic or nitrate-dependant sulfur oxidation, and a number of bacteria other than Geobacteraceae that may enzymatically reduce U(VI). Finally, in depth community probing with PhyloChip determined the efficacy of experimental approaches, notably revealing striking similarity amongst stimulated sediment (from drill cores and in-situ columns) and groundwater communities, and demonstrating that sediment-packed in-situ (down-well) columns served as an ideal method for subsurface biostimulation.« less

Assessing Resiliency in a Large Lake Receiving Mine Tailings Waste: Impacts of Major Environmental Disturbance.

NASA Astrophysics Data System (ADS)

Petticrew, Ellen; Owens, Philip; Albers, Sam

2016-04-01

On 4th August 2014, the tailings impoundment of the Mount Polley copper and gold mine in British Columbia failed. Material from the impoundment (surface area = 2.7 km2) flowed into nearby Polley Lake and Hazeltine Creek, before discharging into Quesnel Lake, a large (ca. 100 km long, >500 m deep), relatively pristine lake. Initial estimates suggest that approximately 25 Mm3 of tailings (water and solids) and eroded soils and surficial materials from Hazeltine Creek were delivered to Quesnel Lake, raising the lake by 7.7 cm. Much of this material was deposited at the bottom of Quesnel Lake but a plume of fine-grained sediment (D50 of ca. 1 μm) remained suspended in the water column. The impact of the distribution of this sediment was monitored over the next 15 months using water column profiling for temperature, conductivity, fluorescence and turbidity with depth. The plume movement was regulated by natural processes associated with the physical limnology of this large fjord lake, specifically, seiche events which transferred suspended particles both up-lake, against the flow regime, and down-lake into the Quesnel River. Samples of lake water and bottom sediment taken from the impacted area show elevated levels of total metals and other elements, which may have important ecosystem implications in this watershed. Indeed, the breach occurred at a time when a peak run of sockeye salmon were returning to their natal streams in the Quesnel basin. Zooplankton sampling for metals was initiated in fall 2014 to determine up take of metals into the food web. This poster describes the failure of the impoundment dam and presents results of sampling the aquatic environment over the first fifteen months of impact.

Geotechnical properties of sediments from North Pacific and Northern Bermuda Rise

DOE Office of Scientific and Technical Information (OSTI.GOV)

Silva, A J; Laine, E P; Lipkin, J

1980-01-01

Studies of geotechnical properties for the Sub-seabed Disposal Program have been oriented toward sediment characterization related to effectiveness as a containment media and determination of detailed engineering behavior. Consolidation tests of the deeper samples in the North Pacific clays indicate that the sediment column is normally consolidated. The in-situ coefficient of permeability (k) within the cored depth of 25 meters is relatively constant at 10/sup -7/ cm/sec. Consolidated undrained (CIU) triaxial tests indicate stress-strain properties characteristic of saturated clays with effective angles of friction of 35/sup 0/ for smectite and 31/sup 0/ for illite. These results are being used inmore » computer modeling efforts. Some general geotechnical property data from the Bermuda Rise are also discussed.« less

Determination of DDT and metabolites in surface water and sediment using LLE, SPE, ACE and SE.

PubMed

Sibali, Linda L; Okonkwo, Jonathan O; Zvinowanda, Caliphs

2009-12-01

Surface water and sediment samples collected from Jukskei River in South Africa, were subjected to different extraction techniques, liquid-liquid (LLE), solid-phase extraction (SPE), activated carbon extraction (ACE) and soxhlet extraction (SE) for sediment. The samples were extracted with dichloromethane, cleaned in a silica gel column and the extracts quantified using a Varian 3800 GC-ECD. The percentage recovery test for 2,4'DDT, DDE and DDD and 4,4'DDT, DDE and DDD in water ranged from 80%-96% and 76%-95% (LLE); 56%-76% and 56%-70% (SPE) and 75%-84% (ACE), respectively; while that recoveries for sediment samples varied from 65%-95% for 2,4'DDT, DDE and DDD and 80%-91% for 4,4'DDT, DDE and DDD. The high recoveries exhibited by ACE compared very well with LLE and SE. This was not the case with SPE which exhibited the lowest value of recoveries for both 2,4 and 4,4'DDD, DDE and DDT standard samples. The mean concentrations of DDT and metabolites ranged from nd-1.10 μg/L, nd-0.80 μg/L, nd-1.21 μg/L and 1.92 μg/L for LLE, SPE, ACE and SE, respectively. The total DDT (2,4' and 4,4'-DDT) in water and sediment samples ranged from 1.20-3.25 μg/L and 1.82-5.24 μg/L, respectively. The low concentrations of the DDT metabolites obtained in the present study may suggest a recent contamination of the river by DDT.

On the use of the partitioning approach to derive Environmental Quality Standards (EQS) for persistent organic pollutants (POPs) in sediments: a review of existing data.

PubMed

Dueri, Sibylle; Castro-Jiménez, Javier; Comenges, José-Manuel Zaldívar

2008-09-15

A review of experimental data has been performed to study the relationships between the concentration in water, pore water and sediments for different families of organic contaminants. The objective was to determine whether it is possible to set EQS for sediments from EQS defined for surface waters in the Daughter Directive of the European Parliament (COM (2006) 397). The analysis of experimental data showed that even though in some specific cases there is a coupling between water column and sediments, this coupling is rather the exception. Therefore it is not recommendable to use water column data to assess the chemical quality status of sediments and it is necessary to measure in both media. At the moment EQS have been defined for the water column and will assess only the compliance with good chemical status of surface waters. Since the sediment toxicity depends on the dissolved pore water concentration, the EQS developed for water could be applied to pore water (interstitial water); hence, there would be no need of developing another set of EQS. The partitioning approach has been proposed as a solution to calculate sediment EQS from water EQS, but the partitioning coefficient strongly depends on sediment characteristics and its use introduces an important uncertainty in the definition of sediment EQS. Therefore, the direct measurement of pore water concentration is regarded as a better option.

Towards the development of a combined Norovirus and sediment transport model for coastal waters

NASA Astrophysics Data System (ADS)

Barry, K.; O'Kane, J. P. J.

2009-04-01

Sewage effluent in coastal waters used for oyster culture poses a risk to human health. The primary pathogen in outbreaks of gastroenteritis following consumption of raw oysters is the Norovirus or "winter vomiting bug". The Norovirus is a highly infectious RNA virus of the Caliciviridae taxonomic family. It has a long survival time in coastal waters (T90 = 30 days in winter). Oysters selectively concentrate Norovirus in their digestive ducts. The virus cannot be removed by conventional depuration. The primary goal of the research is to quantify the risk of Norovirus infection in coastal waters through physically-based high-resolution numerical modelling. Cork Harbour and Clew Bay in Ireland provide case studies for the research. The models simulate a number of complex physical, chemical and biological processes which influence the transport and decay of the virus as well as its bioaccumulation in oyster tissue. The current phase of the research is concerned with the adsorption of the virus to suspended sediment in the water column. Adsorbed viruses may be taken out of the water column when sedimentation occurs and, subsequently, be added to it with resuspension of the bed sediment. Preliminary simulations of the Norovirus-sediment model indicate that suspended sediment can influence the transport of the virus in coastal waters when a high sediment-water partitioning coefficient is used and the model is run under calm environmental conditions. In this instance a certain fraction of the adsorbed viruses are taken out of the water column by sedimentation and end up locked in the bed sediment. Subsequently, under storm conditions, a large number of viruses in the bed are released into the water column by erosion of the bed and a risk of contamination occurs at a time different to when the viruses were initially released into the body of water.

Strontium and cesium release mechanisms during unsaturated flow through waste-weathered Hanford sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chang, Hyun-Shik; Um, Wooyong; Rod, Kenton A.

2011-10-01

Leaching behavior of Sr and Cs in the vadose zone of Hanford site (WA, USA) was studied with laboratory-weathered sediments mimicking realistic conditions beneath the leaking radioactive waste storage tanks. Unsaturated column leaching experiments were conducted using background Hanford pore water focused on first 200 pore volumes. The weathered sediments were prepared by 6 months reaction with a synthetic Hanford tank waste leachate containing Sr and Cs (10-5 and 10-3 molal representative of LO- and HI-sediment, respectively) as surrogates for 90Sr and 137Cs. The mineral composition of the weathered sediments showed that zeolite (chabazite-type) and feldspathoid (sodalite-type) were the majormore » byproducts but different contents depending on the weathering conditions. Reactive transport modeling indicated that Cs leaching was controlled by ion-exchange, while Sr release was affected primarily by dissolution of the secondary minerals. The later release of K, Al, and Si from the HI-column indicated the additional dissolution of a more crystalline mineral (cancrinite-type). A two-site ion-exchange model successfully simulated the Cs release from the LO-column. However, a three-site ion-exchange model was needed for the HI-column. The study implied that the weathering conditions greatly impact the speciation of the secondary minerals and leaching behavior of sequestrated Sr and Cs.« less

Presence and survival of culturable Campylobacter spp. and Escherichia coli in a temperate urban estuary.

PubMed

Schang, Christelle; Lintern, Anna; Cook, Perran L M; Osborne, Catherine; McKinley, Anand; Schmidt, Jonathon; Coleman, Rhys; Rooney, Graham; Henry, Rebekah; Deletic, Ana; McCarthy, David

2016-11-01

Urban estuaries throughout the world typically contain elevated levels of faecal contamination, the extent of which is generally assessed using faecal indicator organisms (FIO) such as Escherichia coli. This study assesses whether the bacterial FIO, E. coli is a suitable surrogate for Campylobacter spp., in estuaries. The presence and survival dynamics of culturable E. coli and Campylobacter spp. are compared in the water column, bank sediments and bed sediments of the Yarra River estuary (located in Melbourne, Australia). The presence of E. coli did not necessarily indicate detectable levels of Campylobacter spp. in the water column, bed and bank sediments, but the inactivation rates of the two bacteria were similar in the water column. A key finding of the study is that E. coli and Campylobacter spp. can survive for up to 14days in the water column and up to 21days in the bed and bank sediments of the estuary. Preliminary data presented in this study also suggests that the inactivation rates of the two bacteria may be similar in bed and bank sediments. This undermines previous hypotheses that Campylobacter spp. cannot survive outside of its host and indicates that public health risks can persist in aquatic systems for up to three weeks after the initial contamination event. Copyright © 2016. Published by Elsevier B.V.

Metagenomic evidence for reciprocal particle exchange between the mainstem estuary and lateral bay sediments of the lower Columbia River

PubMed Central

Smith, Maria W.; Davis, Richard E.; Youngblut, Nicholas D.; Kärnä, Tuomas; Herfort, Lydie; Whitaker, Rachel J.; Metcalf, William W.; Tebo, Bradley M.; Baptista, António M.; Simon, Holly M.

2015-01-01

Lateral bays of the lower Columbia River estuary are areas of enhanced water retention that influence net ecosystem metabolism through activities of their diverse microbial communities. Metagenomic characterization of sediment microbiota from three disparate sites in two brackish lateral bays (Baker and Youngs) produced ∼100 Gbp of DNA sequence data analyzed subsequently for predicted SSU rRNA and peptide-coding genes. The metagenomes were dominated by Bacteria. A large component of Eukaryota was present in Youngs Bay samples, i.e., the inner bay sediment was enriched with the invasive New Zealand mudsnail, Potamopyrgus antipodarum, known for high ammonia production. The metagenome was also highly enriched with an archaeal ammonia oxidizer closely related to Nitrosoarchaeum limnia. Combined analysis of sequences and continuous, high-resolution time series of biogeochemical data from fixed and mobile platforms revealed the importance of large-scale reciprocal particle exchanges between the mainstem estuarine water column and lateral bay sediments. Deposition of marine diatom particles in sediments near Youngs Bay mouth was associated with a dramatic enrichment of Bacteroidetes (58% of total Bacteria) and corresponding genes involved in phytoplankton polysaccharide degradation. The Baker Bay sediment metagenome contained abundant Archaea, including diverse methanogens, as well as functional genes for methylotrophy and taxonomic markers for syntrophic bacteria, suggesting that active methane cycling occurs at this location. Our previous work showed enrichments of similar anaerobic taxa in particulate matter of the mainstem estuarine water column. In total, our results identify the lateral bays as both sources and sinks of biogenic particles significantly impacting microbial community composition and biogeochemical activities in the estuary. PMID:26483785

The Transition of Benthic Nutrient Sources after Planned Levee Breaches Adjacent to Upper Klamath and Agency Lakes, Oregon

USGS Publications Warehouse

Kuwabara, James S.; Topping, Brent R.; Carter, James L.; Parcheso, Francis; Cameron, Jason M.; Asbill, Jessica R.; Fend, Steven V.; Duff, John H.; Engelstad, Anita C.

2010-01-01

Four sampling trips were coordinated after planned levee breaches that hydrologically reconnected both Upper Klamath Lake and Agency Lake, Oregon, to adjacent wetlands. Sets of nonmetallic pore-water profilers were deployed during these trips in November 2007, June 2008, May 2009, and July 2009. Deployments temporally spanned the annual cyanophyte bloom of Aphanizomenon flos-aquae (AFA) and spatially involved three lake and four wetland sites. Profilers, typically deployed in triplicate at each lake or wetland site, provided high-resolution (centimeter-scale) estimates of the vertical concentration gradients for diffusive-flux determinations. Estimates based on molecular diffusion may underestimate benthic flux because solute transport across the sediment-water interface can be enhanced by processes including bioturbation, bioirrigation and groundwater advection. Water-column and benthic samples were also collected to help interpret spatial and temporal trends in diffusive-flux estimates. Data from these samples complement taxonomic and geochemical analyses of bottom-sediments taken from Upper Klamath Lake (UKL) in prior studies. This ongoing study provides information necessary for developing process-interdependent solute-transport models for the watershed (that is, models integrating physical, geochemical, and biological processes) and supports efforts to evaluate remediation or load-allocation strategies. To augment studies funded by the U.S. Bureau of Reclamation (USBR), the Department of the Interior supported an additional full deployment of pore-water profilers in November 2007 and July 2009, immediately following the levee breaches and after the crash of the annual summer AFA bloom. As observed consistently since 2006, benthic flux of 0.2-micron filtered, soluble reactive phosphorus (that is, biologically available phosphorus, primarily as orthophosphate; SRP) was consistently positive (that is, out of the sediment into the overlying water column) and ranged from a negligible value (-0.19?0.91 milligrams per square meter per day; mg m-2 d-1) within wetlands of the Upper Klamath National Wildlife Refuge to 74?48 mg m-2 d-1 at the newly restored wetland site removed from the levee breach (TNC1); both observed in May 2009 before the annual AFA bloom. When areally averaged (13 km2 for the newly restored wetlands), an SRP flux to the overlying water column is determined of approximately 87,000 kilograms (kg) over the 3-month AFA bloom season that exceeds the magnitude of riverine inputs (42,000 kg for the season). Elevated SRP benthic flux at TNC1 relative to all other lake and wetland sites (including TNC2 near the breached levee) in 2009 suggests that the restored wetlands, at least chemically, remain in a transition period after engineered blasts on October 30, 2007, restored hydrologic connectivity between lake and wetland environments. As reported in previous lake studies, ammonium fluxes to the water column were consistently positive, with the exception of two measurements at the restored wetland sites (TNC1 and TNC2) immediately following the levee breaches in November 2007. The flux of ammonia, particularly at elevated pH in the overlying water column, has toxicological implications for endangered fish populations in both lake and wetland environments. For dissolved nitrate, with the exception of a single positive flux measurement at TNC1 in June 2008 (0.16?0.02 mg m-2 d-1), consistently negative (consumed by the sediment) or undetectable nitrate-flux values were observed (-21?12 mg m-2 d-1 to undetectable fluxes due to concentrations for dissolved nitrate <0.03 milligrams per liter (mg L-1) in both porewaters and overlying waters near the sediment-water interface). Such negative fluxes for dissolved nitrate are typical of microbial transformations, such as dinitrification (dissimilatory nitrate reduction), that benthically consume nitrate from the water column. The diffusive-flux measurements reported herei

Dispersal of post-larval macrobenthos in subtidal sedimentary habitats: Roles of vertical diel migration, water column, bedload transport and biological traits' expression

NASA Astrophysics Data System (ADS)

Pacheco, Aldo S.; Uribe, Roberto A.; Thiel, Martin; Oliva, Marcelo E.; Riascos, Jose M.

2013-03-01

Post-larval dispersal along the sediment-water interface is an important process in the dynamics of macrobenthic populations and communities in marine sublittoral sediments. However, the modes of post-larval dispersal in low energy sublittoral habitats have been poorly documented. Herein we examined the specific dispersal mechanisms (diel vertical migration, water column, and bedload transport) and corresponding biological traits of the dispersing assemblage. At two sublittoral sites (sheltered and exposed) along the northern coast of Chile, we installed different trap types that capture benthic organisms with specific modes of dispersal (active emergence and passive water column drifting) and also by a combination of mechanisms (bedload transport, passive suspension and settlement from the water column). Our results show that even though there were common species in all types of traps, the post-larval macrobenthic assemblage depended on specific mechanisms of dispersal. At the sheltered site, abundant emerging taxa colonized sediments that were placed 0.5 m above the bottom and bedload-transported invertebrates appeared to be associated to the passive drifting of macroalgae. At the exposed site, assemblage dispersal was driven by specific mechanisms e.g. bedload transport and active emergence. At both sites the biological traits "small size, swimming, hard exoskeleton, free living and surface position" were associated to water column and bedload dispersal. This study highlights the importance of (i) the water-sediment interface for dispersal of post-larvae in sublittoral soft-bottom habitat, and (ii) a specific set of biological traits when dispersing either along the bottom or through the water column.

Phylogenetic analysis of Archaea in the deep-sea sediments of west Pacific Warm Pool.

PubMed

Wang, Peng; Xiao, Xiang; Wang, Fengping

2005-06-01

Archaea are known to play important roles in carbon cycling in marine sediments. The main compositions of archaeal community in five deep-sea sediment samples collected from west Pacific Warm Pool area (WP-0, WP-1, WP-2, WP-3, WP-4), and in five sediment layers (1 cm-, 3 cm-, 6 cm-, 10 cm-, 12 cm- layer) of the 12 cm sediment core of WP-0 were checked and compared by denaturing gradient gel electrophoresis and 16 S rRNA gene sequencing. It was revealed that all the deep-sea sediment samples checked contained members of non-thermophilic marine group I crenarchaeota as the predominant archaeal group. To further detect groups of archaea possibly relating with C1 metabolism, PCR amplification was carried out using primers targeting methane-oxidizing archaea. Although no methane-oxidizing archaea was detected, a group of novel archaea (named as WPA) was instead identified from all these five WP samples by clone analysis. They could be placed in the euryarchaeota kingdom, separated into two distinct groups, the main group was peripherally related with methanogens, the other group related with Thermoplasma. The vertical distributions of WPA, archaea and bacteria along the WP-0 sediment column were determined by quantitative-PCR. It was found that bacteria dominated at all depths, the numbers of bacteria were 10-10(4) times more than those of archaea. The proportion of archaea versus bacteria had a depth related increasing tendency, it was lowest at the first layer (0.01%), reached highest at the 12 cm- layer (10%). WPA only constituted a small proportion of the archaeal community (0.05% to 5%) of west Pacific Warm Pool sediment.

How organic carbon derived from multiple sources contributes to carbon sequestration processes in a shallow coastal system?

PubMed Central

Watanabe, Kenta; Kuwae, Tomohiro

2015-01-01

Carbon captured by marine organisms helps sequester atmospheric CO2, especially in shallow coastal ecosystems, where rates of primary production and burial of organic carbon (OC) from multiple sources are high. However, linkages between the dynamics of OC derived from multiple sources and carbon sequestration are poorly understood. We investigated the origin (terrestrial, phytobenthos derived, and phytoplankton derived) of particulate OC (POC) and dissolved OC (DOC) in the water column and sedimentary OC using elemental, isotopic, and optical signatures in Furen Lagoon, Japan. Based on these data analysis, we explored how OC from multiple sources contributes to sequestration via storage in sediments, water column sequestration, and air–sea CO2 exchanges, and analyzed how the contributions vary with salinity in a shallow seagrass meadow as well. The relative contribution of terrestrial POC in the water column decreased with increasing salinity, whereas autochthonous POC increased in the salinity range 10–30. Phytoplankton-derived POC dominated the water column POC (65–95%) within this salinity range; however, it was minor in the sediments (3–29%). In contrast, terrestrial and phytobenthos-derived POC were relatively minor contributors in the water column but were major contributors in the sediments (49–78% and 19–36%, respectively), indicating that terrestrial and phytobenthos-derived POC were selectively stored in the sediments. Autochthonous DOC, part of which can contribute to long-term carbon sequestration in the water column, accounted for >25% of the total water column DOC pool in the salinity range 15–30. Autochthonous OC production decreased the concentration of dissolved inorganic carbon in the water column and thereby contributed to atmospheric CO2 uptake, except in the low-salinity zone. Our results indicate that shallow coastal ecosystems function not only as transition zones between land and ocean but also as carbon sequestration filters. They function at different timescales, depending on the salinity, and OC sources. PMID:25880367

Are there Benefits to Combining Regional Probabalistic Survey and Historic Targeted Environmental Monitoring Data to Improve Our Understanding of Overall Regional Estuary Environmental Status?

NASA Astrophysics Data System (ADS)

Dasher, D. H.; Lomax, T. J.; Bethe, A.; Jewett, S.; Hoberg, M.

2016-02-01

A regional probabilistic survey of 20 randomly selected stations, where water and sediments were sampled, was conducted over an area of Simpson Lagoon and Gwydyr Bay in the Beaufort Sea adjacent Prudhoe Bay, Alaska, in 2014. Sampling parameters included water column for temperature, salinity, dissolved oxygen, chlorophyll a, nutrients and sediments for macroinvertebrates, chemistry, i.e., trace metals and hydrocarbons, and grain size. The 2014 probabilistic survey design allows for inferences to be made of environmental status, for instance the spatial or aerial distribution of sediment trace metals within the design area sampled. Historically, since the 1970's a number of monitoring studies have been conducted in this estuary area using a targeted rather than regional probabilistic design. Targeted non-random designs were utilized to assess specific points of interest and cannot be used to make inferences to distributions of environmental parameters. Due to differences in the environmental monitoring objectives between probabilistic and targeted designs there has been limited assessment see if benefits exist to combining the two approaches. This study evaluates if a combined approach using the 2014 probabilistic survey sediment trace metal and macroinvertebrate results and historical targeted monitoring data can provide a new perspective on better understanding the environmental status of these estuaries.

Distribution, sedimentation, and bioavailability of particulate phosphorus in the mainstream of the Three Gorges Reservoir.

PubMed

Tang, Xianqiang; Wu, Min; Li, Rui

2018-09-01

The transportation and sedimentation of particulate phosphorus (PP) in a huge reservoir such as the Three Gorges Reservoir (TGR) are closely related to the phosphorus distribution characteristics and nutritional status of the water body. In this study, the PP distribution, sedimentation, and bioavailability in the mainstream section of the TGR were investigated through a field survey, indoor simulated settlement experiment, and historical data analysis. The results indicated that PP was the major component of the total phosphorus (TP) and that the Three Gorges Dam (TGD) trapped nearly 76.25% of suspended sediment (SS) and 75.35% of PP in the TGR, even during the flood season. A decline in flow velocity promoted the deposition of PP; additionally, PP concentrations gradually dropped from 0.35 mg/L in Chongqing to 0.02 mg/L in Zigui. The static PP sedimentation process adequately fitted a pseudo-second-order kinetic equation with a maximum correlation coefficient of 0.97. Moreover, more than half of the PP sedimentation process was achieved in less than 60 min for samples collected from the upper river reaches within simulated sedimentation process. The median particle size of SS and absolute value of the water column's zeta potential were negatively and positively related to the t 12 values of PP sedimentation, respectively. Compared with the concentration and particle size of SS obtained in the pre-TGR period, the values in the mainstream section of the TGR were lower. However, the TP and Fe/Al-P contents in SS increased several times. Due to the combined effects of flow velocity reduction and SS trapping, the water transparency and bioavailability of water column phosphorus were enhanced. Thus, the risk of water bloom outburst significantly increased when the impounded water level of 175 m in the TGR became the normal state. Copyright © 2018 Elsevier Ltd. All rights reserved.

The Chaoborus pump: Migrating phantom midge larvae sustain hypolimnetic oxygen deficiency and nutrient internal loading in lakes.

PubMed

Tang, Kam W; Flury, Sabine; Grossart, Hans-Peter; McGinnis, Daniel F

2017-10-01

Hypolimnetic oxygen demand in lakes is often assumed to be driven mainly by sediment microbial processes, while the role of Chaoborus larvae, which are prevalent in eutrophic lakes with hypoxic to anoxic bottoms, has been overlooked. We experimentally measured the respiration rates of C. flavicans at different temperatures yielding a Q 10 of 1.44-1.71 and a respiratory quotient of 0.84-0.98. Applying the experimental data in a system analytical approach, we showed that migrating Chaoborus larvae can significantly add to the water column and sediment oxygen demand, and contribute to the observed linear relationship between water column respiration and depth. The estimated phosphorus excretion by Chaoborus in sediment is comparable in magnitude to the required phosphorus loading for eutrophication. Migrating Chaoborus larvae thereby essentially trap nutrients between the water column and the sediment, and this continuous internal loading of nutrients would delay lake remediation even when external inputs are stopped. Copyright © 2017 Elsevier Ltd. All rights reserved.

DISSOLVED-COLLOIDAL PARTITIONING OF MOBILIZED METALS DURING RESUSPENSION OF MARINE SEDIMENTS

EPA Science Inventory

Sediments in many urban estuaries are contaminated by potentially toxic heavy metals. Over time, many of these metals accumulate in the sediment due to physico-chemical processes which remove them from the water column. Marine sediments are regularly subjected to physical process...

GOM Deepwater Horizon Oil Spill: A Time Series Analysis of Variations in Spilled Hydrocarbons

NASA Astrophysics Data System (ADS)

Palomo, C. M.; Yan, B.

2013-12-01

An estimated amount of 210 million gallons of crude oil was released into the Gulf of Mexico (GOM) from April 20th to July 15th 2010 during the Deepwater Horizon oil rig explosion. The spill caused a tremendous financial, ecological, environmental and health impact and continues to affect the GOM today. Variations in hydrocarbons including alkanes, hopanes and poly-cyclic aromatic hydrocarbons (PAHs) can be analyzed to better understand the oil spill and assist in oil source identification. Twenty-one sediment samples*, two tar ball samples and one surface water oil sample were obtained from distinct locations in the GOM and within varying time frames from May to December 2010. Each sample was extracted through the ASE 200 solvent extractor, concentrated down under nitrogen gas, purified through an alumina column, concentrated down again with nitrogen gas and analyzed via GC X GC-TOF MS. Forty-one different hydrocarbons were quantified in each sample. Various hydrocarbon 'fingerprints,' such as parental :alkylate PAH ratios, high molecular weight PAHs: low molecular weight alkane ratios, and carbon preference index were calculated. The initial objective of this project was to identify the relative hydrocarbon contributions of petrogenic sources and combustion sources. Based on the calculated ratios, it is evident that the sediment core taken in October of 2010 was greatly affected by combustion sources. Following the first month of the spill, oil in the gulf was burned in attempts to contain the spill. Combustion related sources have quicker sedimentation rates, and hydrocarbons from a combustion source essentially move into deeper depths quicker than those from a petrogenic source, as was observed in analyses of the October 2010 sediment. *Of the twenty-one sediment samples prepared, nine were quantified for this project.

Evaluation of a laboratory-scale bioreactive in situ sediment cap for the treatment of organic contaminants.

PubMed

Himmelheber, David W; Pennell, Kurt D; Hughes, Joseph B

2011-11-01

The development of bioreactive sediment caps, in which microorganisms capable of contaminant transformation are placed within an in situ cap, provides a potential remedial design that can sustainably treat sediment and groundwater contaminants. The goal of this study was to evaluate the ability and limitations of a mixed, anaerobic dechlorinating consortium to treat chlorinated ethenes within a sand-based cap. Results of batch experiments demonstrate that a tetrachloroethene (PCE)-to-ethene mixed consortium was able to completely dechlorinate dissolved-phase PCE to ethene when supplied only with sediment porewater obtained from a sediment column. To simulate a bioreactive cap, laboratory-scale sand columns inoculated with the mixed culture were placed in series with an upflow sediment column and directly supplied sediment effluent and dissolved-phase chlorinated ethenes. The mixed consortium was not able to sustain dechlorination activity at a retention time of 0.5 days without delivery of amendments to the sediment effluent, evidenced by the loss of cis-1,2-dichloroethene (cis-DCE) dechlorination to vinyl chloride. When soluble electron donor was supplied to the sediment effluent, complete dechlorination of cis-DCE to ethene was observed at retention times of 0.5 days, suggesting that sediment effluent lacked sufficient electron donor to maintain active dechlorination within the sediment cap. Introduction of elevated contaminant concentrations also limited biotransformation performance of the dechlorinating consortium within the cap. These findings indicate that in situ bioreactive capping can be a feasible remedial approach, provided that residence times are adequate and that appropriate levels of electron donor and contaminant exist within the cap. Copyright © 2011 Elsevier Ltd. All rights reserved.

Experimental investigation of cesium mobility in the course of secondary mineral formations in Hanford sediment columns at 50 degrees C.

PubMed

Mashal, Kholoud Y; Cetiner, Ziya S

2010-10-01

Formation of secondary minerals and Cs mobility in Hanford sediments were investigated under conditions similar to the Hanford tank leak in a dynamic flow system at 50 degrees C. The objectives were to (1) examine the nature and locations of secondary mineral phases precipitated in the sediments and (2) quantify the amount of Cs retained by the sediment matrix at 50 degrees C. To this end, Hanford sediments were packed into 10-cm long columns and leached with simulated tank waste consisting of 1.4 M NaOH, 0.125 M NaAlO(2), 3.7 M NaNO(3), and 1.3 x 10(-4) M Cs at 50 degrees C. Compositions of outflow solution were monitored with time for up to 25 days, and the columns were then segmented into four 2.5-cm long layers. The colloidal fraction in these segments was characterized in terms of mineralogy, particle morphology, Cs content, and short-range Al and Si structure. It was observed that cancrinite and sodalite precipitated at 50 degrees C. Approximately 53% Cs was retained in the column treated by the simulated tank waste at this temperature. Cesium retention in the column was lowered in the high ionic strength solution due to competition from Na for the exchange sites. This can be explained by alteration of distribution and number of sorption sites which reduces the selectivity of Cs for Na, and through the formation of cancrinite and sodalite. The formation of hydroxide complexes in highly alkaline solutions could also contribute to relatively poor retention of Cs by hindering ion exchange mechanism.

Interannual variation in seasonal diatom dynamics - what information is preserved in an annual sediment record?

NASA Astrophysics Data System (ADS)

Maier, D. B.; Bigler, C.; Diehl, S.

2017-12-01

Diatom sediment assemblages are among the most important proxies for past climate and ecological condition reconstruction in aquatic environments, but the role of seasonality in the formation of diatom records is poorly understood. In this study we combine the diatom record of a varved sediment with year-round physico-chemical water column monitoring and the corresponding sequential sediment trap diatom record to disentangle the process information contained in a diatom sediment signal. The comparison of three consecutive annual diatom records indicates that the entire annual diatom sediment signal can be driven by winter air temperature induced timing of ice and snow melt and persistent under-ice stratification promoting an early diatom bloom under ice before spring lake over-turn. By contrast, in a year of late ice thinning when the chlorophyll a maximum occurred after spring lake over-turn, a more annually integrated diatom sediment signal was built buy a continuous diatom flux. The contrasting diatom records produced during years of different winter conditions have important implications for diatom based paleoecological reconstructions. Decadal records of sediment trap samples as well as long-term varved sediment records provide further support for the role of late winter and early spring weather conditions in determining sediment diatom assemblages.

Evaluation of Sediment Agitation and Mixing Into the Surrounding Water Column From Capping Activities – Boston Harbor

EPA Science Inventory

Capping is a common remediation technology for the containment of contaminated sediments. While capping is a common remediation technology for contaminated sediments, little information exists on the potential release of contaminated sediments during and after the capping operati...

Impact of the temporal variation of oxygen contents in the water column on the biogeochemistry of the benthic zone

NASA Astrophysics Data System (ADS)

Rigaud, Sylvain; Deflandre, Bruno; Grenz, Christian; Pozzato, Lara; Cesbron, Florian; Meulé, Samuel; Bonin, Patricia; Michotey, Valérie; Mirleau, Pascal; Mirleau, Fatma; Knoery, Joel; Zuberer, Frédéric; Guillemain, Dorian; Marguerite, Sébatien; Mayot, Nicolas; Faure, Vincent; Grisel, Raphael; Radakovitch, Olivier

2017-04-01

The desoxygenation of the water column in coastal areas, refered as coastal hypoxia, is currently a growing phenomenon still particularly complex to predict. This is mainly due to the fact that the biogeochemical response of the benthic ecosystem to the variation of the oxygen contents in the water column remains poorly understood. Dissolved oxygen concentration is a key parameter controling the benthic micro- and macro-community as well as the biogeochemical reactions occuring in the surface sediment. More particularly, the variation over variable time scales (from hour to years) of the oxygen deficit may induce different pathways for biogeochemical processes such as the oxydation of freshly deposited organic matter and nutrients and metals recycling. This results in variable chemical fluxes at the sediment-water interface, that may in turn, support the eutrophication and desoxygenation of the aquatic system. Our study focus on the Berre lagoon, an eutrophicated mediterranean lagoon impacted by hypoxia events in the water column. Three stations, closely located but impacted by contrasted temporal variation of oxygen deficit in the water column were selected: one station with rare oxygen deficit and with functionnal macrofauna community, one station with almost permanent oxygen deficit and no macrofauna community and one intermediate station with seasonnal oxygen deficit and degraded macrofauna community. Each station was surveyed once during a same field survey while the intermediate station was surveyed seasonnaly. For each campaign, we report vertical profiles of the main chemical components (oxygen, nutrients, metals) along the water-column/sediment continuum, with an increased vertical resolution in the benthic zone using a multi-tool approach (high vertical resolution suprabenthic water sampler and microsensors profiler). In addition, total chemical fluxes at the sediment-water interface was obtained using benthic chambers. This dataset was used to evaluate the influence, of the oxygen concentrations (and its short and long-term variations) in the water column on the nature and location of the main biogeochemical reactions occuring in the benthic zone and the resulting fluxes at the sediment-water interface.

Organic Geochemistry of Sediments in Nearshore Areas of the Mississippi and Atchafalaya Rivers: I. General Organic Characterization

USGS Publications Warehouse

Orem, William H.; Rosenbauer, Robert J.; Swarzenski, Peter W.; Lerch, Harry E.; Corum, Margo D.; Bates, Anne L.

2007-01-01

This report presents results on the general organic characteristics of sediment cores collected from the coastal zone of the Mississippi River system, including distributions of the important nutrient elements (C, N, P, and S). This was part of a larger study conducted from 2001-2005 to examine the delivery of sediment-associated contaminants to the Gulf of Mexico by the Mississippi River system, funded by the USGS Coastal and Marine Geology Program. Companion reports emphasize organic contaminants (Rosenbauer and others, 2006), and metals (Swarzenski and others, 2006). The level of contamination within the deltaic system of the Mississippi River system was determined through the collection of sediment cores from interdistributary bays, and offshore in the Gulf of Mexico, including the zone of hypoxia. Results provide the basis for reconstructing contaminant inventories from which to develop historic perspectives on nutrient loading and hypoxia, and to better understand how sediment-hosted contaminants either directly or indirectly move through biota and ultimately affect ecosystem health. Concentrations of C, N, P, and S in sediments varied by a factor of 10 between sites, and in down core profiles. Nearshore cores collected in 2001 proved to have erratic downcore C, N, P, and S profiles and sediment deposition rates, suggesting a high energy regime controlled more by variability in river flow rather than by geochemical processes and reactions within the system. These results focused further coring activities further offshore. Atomic C/N ratios suggest that organic matter deposited at all sites is a mix of microbial (algal) and terrestrial (vascular plant) remains, but with algal material dominant. Concentrations of total sulfur in sediments from cores in the zone of hypoxia were often higher than those in nearby zones with oxic water columns. Corresponding atomic C/S ratios were typically lower in sediments from sites in the zone of hypoxia compared to nearby sites with oxic water columns, and thus atomic C/S values may be useful as a proxy for identifying sites impacted by hypoxic conditions in the water column and for examining historical trends in hypoxia. At one site examined in this study, maximum hypoxic conditions were observed in the mid 1960's. The organic elemental composition (C, N, P, and S) of sediments was also used to guide sample selection for contaminant analysis, and to normalize the contaminant data to organic C content of the sediments. Dissolved hydrocarbon gases in sediments showed a dominance of methane, but identifiable concentrations of ethane and hexane, and trace concentrations of propane, butane, and pentane were also detected. All dissolved gases except hexane were dominated by 'bound' gas, gas released only after agitation of the sediment in a blender. Hexane, in contrast was observed mostly as free gas, determined by headspace analysis.

Pathway Ranking for In-place Sediment Management (CU1209). Site 2 Report - Pearl Harbor

DTIC Science & Technology

2006-04-01

type resistance cell. The probe is configured with two pairs of stainless steel electrodes, the outer pair through which a known current is imposed...the “bioinhibited” (no oxygen control) deployment at BPA . Vertical axis is dissolved oxygen concentration, and horizontal axis is sample record at 6...99 Table 5-7. BFSD results from site BPA . Numbers in the Flux Rate Confidence column indicate the

Phorbin steryl esters in Black Sea sediment traps and sediments: A preliminary evaluation of their paleooceanographic potential

NASA Astrophysics Data System (ADS)

King, Linda L.; Repeta, Daniel J.

1994-10-01

The distributions of pyropheophorbide- a steryl esters in one-year deployments of sediment traps at two locations in the Black Sea are described. In nearly all our trap samples, phorbin steryl esters (PSEs) contribute a significant portion of the total phorbin flux. The relative abundances of sterols esterified to pyropheophorbide- a varied throughout the year, and we suggest these changes result from the observed seasonal variation of phytoplankton species in the overlying water column. The distribution of free sterols in a one-year composite sediment trap sample closely approximates the distribution of sterols derived from the hydrolysis of sedimentary PSEs collected at an adjacent site. From these results, we suggest that the distribution of sedimentary PSE sterols provides a record of sterol deposition to the sediment-water interface. Esterification of sterols to pyropheophorbide- a apparently prevents the preferential removal of 4-desmethyl sterols relative to 4-methyl sterols, and the reduction of stenols to stanols during degradation. Analysis of PSEs in a gravity core covering the last 8-10 Kyr shows that the abundance and distribution of PSEs change with downcore variations in sedimentology. Detailed analysis of PSEs in sediments may, therefore, provide a means to evaluate paleooceanographic changes in phytoplankton community structure and sterol early diagenesis. The synthesis, NMR, CI-MS, and visible spectroscopic properties of four abundant PSEs found in the Black Sea are also described.

Towards A Modern Calibration Of The 238U/235U Paleoredox Proxy: Apparent Uranium Isotope Fractionation Factor During U(VI)-U(IV) Reduction In The Black Sea

NASA Astrophysics Data System (ADS)

Rolison, J. M.; Stirling, C. H.; Middag, R.; Rijkenberg, M. J. A.; De Baar, H. J. W.

2015-12-01

The isotopic compositions of redox-sensitive metals, including uranium (U), in marine sediments have recently emerged as powerful diagnostic tracers of the redox state of the ancient ocean-atmosphere system. Interpretation of sedimentary isotopic information requires a thorough understating of the environmental controls on isotopic fractionation in modern anoxic environments before being applied to the paleo-record. In this study, the relationship between ocean anoxia and the isotopic fractionation of U was investigated in the water column and sediments of the Black Sea. The Black Sea is the world's largest anoxic basin and significant removal of U from the water column and high U accumulation rates in modern underlying sediments have been documented. Removal of U from the water column occurs during the redox transition of soluble U(VI) to relatively insoluble U(IV). The primary results of this study are two-fold. First, significant 238U/235U fractionation was observed in the water column of the Black Sea, suggesting the reduction of U induces 238U/235U fractionation with the preferential removal of 238U from the aqueous phase. Second, the 238U/235U of underlying sediments is related to the water column through the isotope fractionation factor of the reduction reaction but is influenced by mass transport processes. These results provide important constraints on the use of 238U/235U as a proxy of the redox state of ancient oceans.

Pilot study for ambient toxicity testing in Chesapeake bay. Year two report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, L.W.; Ziegenfuss, M.C.; Fischer, S.A.

1992-11-01

The primary goal of the ambient toxicity testing pilot study was to identify toxic areas in living resource habitats of the Chesapeake Bay watershed by using a battery of standardized, directly modified or recently developed water column, sediment and suborganismal toxicity tests. Tests were conducted twice at the following stations: Potomac River-Morgantown, Potomac River-Dahlgren, Patapsco River and Wye River. A suite of inorganic and organic contaminants was evaluated in the water column and sediment during these tests. Standard water quality conditions were also evaluated in water and sediment from all stations.

Evaluation of Sediment Agitation and Mixing into the Surrounding WaterColumn from Capping Activities at the Wyckoff/Eagle Harbor Superfund Site

EPA Science Inventory

Capping is a common remediation technology for the containment of contaminated sediments. While capping is a common remediation technology for contaminated sediments, little information exists on the potential release of contaminated sediments during and after the capping operati...

SEAGRASS STRESS RESPONSE MODEL: THE IMPORTANCE OF LIGHT, TEMPERATURE, SEDIMENTATION AND GEOCHEMISTRY

EPA Science Inventory

Our objective is to define interactions between seagrass and water-column and sediment stressors. The model was developed and optimized for sediments in Thalassia testudinum seagrass beds of Lower Laguna Madre, Texas, USA and is composed of a plant sub-model and a sediment diagen...

Dissolved oxygen saturation controls PAH biodegradation in freshwater estuary sediments.

PubMed

Boyd, T J; Montgomery, M T; Steele, J K; Pohlman, J W; Reatherford, S R; Spargo, B J; Smith, D C

2005-02-01

Polycyclic aromatic hydrocarbons (PAHs) are common contaminants in terrestrial and aquatic environments and can represent a significant constituent of the carbon pool in coastal sediments. We report here the results of an 18-month seasonal study of PAH biodegradation and heterotrophic bacterial production and their controlling biogeochemical factors from 186 sediment samples taken in a tidally influenced freshwater estuary. For each sampling event, measurements were averaged from 25-45 stations covering approximately 250 km(2). There was a clear relationship between bacterial production and ambient temperature, but none between production and bottom water dissolved oxygen (DO) % saturation or PAH concentrations. In contrast with other studies, we found no effect of temperature on the biodegradation of naphthalene, phenanthrene, or fluoranthene. PAH mineralization correlated with bottom water DO saturation above 70% (r(2) > 0.99). These results suggest that the proportional utilization of PAH carbon to natural organic carbon is as much as three orders of magnitude higher during cooler months, when water temperatures are lower and DO % saturation is higher. Infusion of cooler, well-oxygenated water to the water column overlying contaminated sediments during the summer months may stimulate PAH metabolism preferentially over non-PAH organic matter.

Tidal cycles of total particulate mercury in the Jade Bay, lower Saxonian Wadden Sea, southern North Sea.

PubMed

Jin, Huafang; Liebezeit, Gerd

2013-01-01

In this study, we evaluate the nature of the relationship between particulate matter and total mercury concentrations. For this purpose, we estimate both of the two values in water column over 12-h tidal cycles of the Jade Bay, southern North Sea. Total particulate mercury in 250 mL water samples was determined by oxygen combustion-gold amalgamation. Mercury contents varied from 63 to 259 ng/g suspended particulate matter (SPM) or 3.5-52.8 ng/L in surface waters. Total particulate mercury content (THg(p)) was positively correlated with (SPM), indicating that mercury in tidal waters is mostly associated with (SPM), and that tidal variations of total particulate mercury are mainly due to changes in (SPM) content throughout the tidal cycle. Maximum values for THg(p) were observed during mid-flood and mid-ebb, while the lowest values were determined at low tide and high tide. These data suggest that there are no mercury point sources in the Jade Bay. Moreover, the THg(p) content at low tide and high tide were significantly lower than the values recorded in the bottom sediment of the sampling site (>200 ng/g DW), while THg(p) content during the mid-flood and mid-ebb were comparable to the THg content in the surface bottom sediments. Therefore, changes in THg(p) content in the water column due to tidal forcing may have resulted from re-suspension of underlying surface sediments with relatively high mercury content.

Mercury speciation driven by seasonal changes in a contaminated estuarine environment.

PubMed

Bratkič, Arne; Ogrinc, Nives; Kotnik, Jože; Faganeli, Jadran; Žagar, Dušan; Yano, Shinichiro; Tada, Akihide; Horvat, Milena

2013-08-01

In this study, seasonal changes of mercury (Hg) species in the highly variable estuary of Soča/Isonzo River (northern Adriatic Sea) were investigated. Samplings were performed on a seasonal basis (September 2009, May, August and October 2010) and Hg species (total Hg, methylmercury (MeHg), dissolved gaseous Hg (DGM)) in waters, sediments and pore waters were determined. In addition, a range of ancillary parameters were measured (salinity, nutrients, organic carbon (OC), nitrogen species). Hg values were interpreted using these parameters and hydrological conditions (river flow, wave height) around the time of sampling. There were no significant changes in Hg load from river to the gulf, compared to previous studies. The load was temporarily higher in May 2010 due to higher river flow. Wave height, through changing hydrostatic pressure, was most likely to cause resuspension of already deposited Hg from the bottom (August 2010). The estuary is a net source of DGM to the atmosphere as suggested by DGM profiles, with salinity, redox potential and organic matter as the most probable controls over its production. MeHg is produced in situ in sediment or in water column, rather than transported by river, as indicated by its correlation with OC of the marine origin. Calculated fluxes for THg and MeHg showed sediment as a source for both the water column. In pore waters, OC in part affects partitioning of both THg and MeHg; however other factors (e.g. sulphide and/or oxyhydroxides precipitation and dissolution) are also probably important. Copyright © 2013 Elsevier Inc. All rights reserved.

Suspended sediment transport under estuarine tidal channel conditions

USGS Publications Warehouse

Sternberg, R.W.; Kranck, K.; Cacchione, D.A.; Drake, D.E.

1988-01-01

A modified version of the GEOPROBE tripod has been used to monitor flow conditions and suspended sediment distribution in the bottom boundary layer of a tidal channel within San Francisco Bay, California. Measurements were made every 15 minutes over three successive tidal cycles. They included mean velocity profiles from four electromagnetic current meters within 1 m of the seabed; mean suspended sediment concentration profiles from seven miniature nephelometers operated within 1 m of the seabed; near-bottom pressure fluctuations; vertical temperature gradient; and bottom photographs. Additionally, suspended sediment was sampled from four levels within 1 m of the seabed three times during each successive flood and ebb cycle. While the instrument was deployed, STD-nephelometer measurements were made throughout the water column, water samples were collected each 1-2 hours, and bottom sediment was sampled at the deployment site. From these measurements, estimates were made of particle settling velocity (ws) from size distributions of the suspended sediment, friction velocity (U*) from the velocity profiles, and reference concentration (Ca) was measured at z = 20 cm. These parameters were used in the suspended sediment distribution equations to evaluate their ability to predict the observed suspended sediment profiles. Three suspended sediment particle conditions were evaluated: (1) individual particle size in the 4-11 ?? (62.5-0.5 ??m) range with the reference concentration Ca at z = 20 cm (C??), (2) individual particle size in the 4-6 ?? size range, flocs representing the 7-11 ?? size range with the reference concentration Ca at z = 20 cm (Cf), and (3) individual particle size in the 4-6 ?? size range, flocs representing the 7-11 ?? size range with the reference concentration predicted as a function of the bed sediment size distribution and the square of the excess shear stress. In addition, computations of particle flux were made in order to show vertical variations in horizontal mass flux for varying flow conditions. ?? 1988.

Iron Cycling in Sediment of the North Atlantic: Preliminary Results from R/V Knorr Expedition 223

NASA Astrophysics Data System (ADS)

Anderson, C. H.; Estes, E. R.; Dyar, M. D.; Murray, R. W.; Spivack, A. J.; Sauvage, J.; McKinley, C. C.; Present, T. M.; Homola, K.; Pockalny, R. A.; D'Hondt, S.

2015-12-01

Iron (Fe) in marine sediments is a significant microbial electron acceptor [Fe(III)] in suboxic conditions and is an electron donor [Fe(II)] in oxic conditions. In the transition from oxic to suboxic sediment, a portion of solid Fe is reduced and mobilized as soluble Fe(II) into interstitial water during the oxidation of organic matter. The presence of Fe and its oxidation state in oxic sediment provides insight into an important metabolic and mineral reaction pathway in subseafloor sediment. We recovered bulk sediment and interstitial water at western North Atlantic sites during Expedition 223 on the R/V Knorr in November, 2014. The expedition targeted regions with predominantly oxic sediment and regions with predominantly anoxic sediment, ideal for investigating redox Fe cycling between solid and aqueous phases. At Site 10 (14.4008N, 50.6209W, 4455m water depth), interstitial dissolved oxygen is depleted within the upper few meters of sediment. At Site 12 (29.6767N, 58.3285W, 5637m water depth), interstitial dissolved oxygen is present throughout the cored sediment column (10s of meters). Here we present total solid Fe concentration for 45 bulk sediment samples and total aqueous Fe and Mn concentrations for 50 interstitial water samples analyzed via ICP-ES. We additionally present Fe(II) and Fe(III) speciation results from 10 solid sediment samples determined by Mossbauer spectroscopy. We trace downcore fluctuations in Fe in solid and aqueous phases to understand Fe cycling in oxic, suboxic, and transitional regimes. Our preliminary data indicate that solid Fe concentration ranges from 4-6 wt % at the oxic site; aqueous Fe ranges from below detection to 20μM and aqueous Mn ranges from 1 to 125 μM at the anoxic site. In the anoxic sediment (Site 10), 86-90% of the total Fe is oxidized [Fe(III)] and 10-14% as reduced [Fe(II)], compared to 3-6% as reduced [Fe(II)] at the oxic site (Site 12), even in sediment as old as 25 million years.

Nanoscale Titanium Dioxide (nTiO2) Transport in Water-Saturated Natural Sediments: Influence of Soil Organic Matter and Fe/Al Oxyhydroxides

NASA Astrophysics Data System (ADS)

Fisher-Power, L.; Cheng, T.

2017-12-01

Transport of engineered nanoparticles (ENP) in subsurface environments has important implications to water quality and soil contamination. Although extensive research has been conducted to understand the effects of water chemistry on ENP transport, less attention has been paid to influences from the transport medium/matrix. The objective of this research is to investigate the effects of natural organic matter (NOM) and Fe/Al oxyhydroxides in a natural sediment on ENP transport. A sediment was collected and separated into four portions, one of which was unmodified, and the others treated to remove specific components (organic matter, Fe/Al oxyhydroxides, or both organic matter and Fe/Al oxyhydroxides). Transport of nanoscale titanium dioxide (nTiO2) in columns packed with quartz sand and each of the four types of the sediment under water-saturated conditions was studied. Our results showed that nTiO2 transport was strongly influenced by pH and sediment composition. When influent pH = 5, nTiO2 transport in all the sediments was low, as positively-charged nTiO2 was attracted to negatively charged NOM, quartz, and other minerals. nTiO2 transport was slightly enhanced in columns packed with untreated sediment or Fe/Al oxyhydroxides removed sediment due to dissolved organic matter generated by the partial dissolution of NOM, which adsorbed onto nTiO2 surface and reversed its zeta potential to negative. When influent pH = 9, nTiO2 transport was generally high since negatively-charged nTiO2 was repelled by negatively charged transport medium. However, in columns packed with the organic matter removed sediment or the Fe/Al oxyhydroxides removed sediment, nTiO2 transport was low. This was attributable to pH buffering by the sediment, which decreased pore water pH in the column, resulting in zeta potential change and electrostatic attraction between Fe/Al oxyhydroxides and nTiO2. This research demonstrates that electrostatic forces between nTiO2 and mineral/organic components in natural sediments is a key factor that controls nTiO2 retention and transport, and that both NOM and Fe/Al oxyhydroxides may substantially influence nTiO2 transport.

Total Suspended Matter (TSM) and Maximum Signal Depth (Z90_max) for Monitoring the Evolution of Sediment Resuspension Process in Shallow Coastal Environments

NASA Astrophysics Data System (ADS)

Filipponi, Federico; Zucca, Francesco; Taramelli, Andrea; Valentini, Emiliana

2015-12-01

Monitoring sediment fluxes patterns in coastal area, like dispersion, sedimentation and resuspension processes, is a relevant topic for scientists, decision makers and natural resources management. Time series analysis of Earth Observation (EO) data may contribute to the understanding and the monitoring of processes in sedimentary depositional marine environment, especially for shallow coastal areas. This research study show the ability of optical medium resolution imagery to interpret the evolution of sediment resuspension from seafloor in coastal areas during intense wind forcings. Intense bora wind events in northern Adriatic Sea basin during winter season provoke considerable wave-generated resuspension of sediments, which cause variation in water column turbidity. Total Suspended Matter (TSM) product has been selected as proxy for qualitative and quantitative analysis of resuspended sediments. In addition, maximum signal depth (Z90_max), has been used to evaluate the evolution of sediment concentration in the water column.

Nannofossils in upper quaternary bottom sediments of back-arc basins in the southwestern Pacific

NASA Astrophysics Data System (ADS)

Dmitrenko, O. B.

2015-05-01

The analysis of calcareous nannoplankton assemblages in bottom sediments sampled during Cruise 21 of the R/V Akademik Mstislav Keldysh in three areas located in back-arc basins of the southwestern Pacific (western Woodlark in the Solomon Sea, Manus in the Bismarck Sea, Central Lau) reveal that they belong to the Emiliania huxleyi Acme Zone, the most detailed one in the Gartner's scale of 1977. The content of coccoliths and their taxonomic composition indicate warm subtropical-tropical conditions. Long cores demonstrate a decrease in species diversity reflecting the transition from the cold late Pleistocene to the Holocene. The changes in species diversity and presence/absence of thermophilic representatives indicate transformation of depositional environments with unstable conditions in the water column and bottom layer, seismic activity, and widely developed processes of sediment redistribution and reworking.

Linkages between sea-ice coverage, pelagic-benthic coupling, and the distribution of spectacled eiders: observations in March 2008, 2009 and 2010, northern Bering Sea

USGS Publications Warehouse

Cooper, L.W.; Sexson, M.G.; Grebmeier, J.M.; Gradinger, R.; Mordy, C.W.; Lovvorn, J.R.

2013-01-01

Icebreaker-based sampling in the northern Bering Sea south of St. Lawrence Island in March of 2008, 2009, and 2010 has provided new data on overall ecosystem function early in the annual productive cycle. While water-column chlorophyll concentrations (−2 integrated over the whole water column) are two orders of magnitude lower than observed during the spring bloom in May, sea-ice algal inventories of chlorophyll are high (up to 1 g m−3 in the bottom 2-cm of sea-ice). Vertical fluxes of chlorophyll as measured in sediment traps were between 0.3 to 3.7 mg m−2 d−1 and were consistent with the recent deposition (days to weeks time scale) of chlorophyll to the surface sediments (0–25 mg m−2 present at 0–1 cm). Sediment oxygen respiration rates were lower than previous measurements that followed the spring bloom, but were highest in areas of known high benthic biomass. Early spring release of sedimentary ammonium occurs, particularly southeast of St. Lawrence Island, leading to bottom-water ammonium concentrations of >5 µM. These data, together with other physical, biological, and nutrient data are presented here in conjunction with observed sea-ice dynamics and the distribution of an apex predator, the Spectacled Eider (Somateria fischeri). Sea-ice dynamics in addition to benthic food availability, as determined by sedimentation processes, play a role in the distribution of spectacled eiders, which cannot always access the greatest biomass of their preferred bivalve prey. Overall, the data and observations indicate that the northern Bering Sea is biologically active in late winter, but with strong atmospheric and hydrographic controls. These controls pre-determine nutrient and chlorophyll distributions, water-column mixing, as well as pelagic-benthic coupling.

Accumulation rates of Th-230, Pa-231, and some transition metals on the Bermuda Rise

USGS Publications Warehouse

Bacon, M.P.; Rosholt, J.N.

1982-01-01

Measurements of 238U, 234U, 230Th, 232Th, 231Pa, Mn, Fe, Co, Ni, Cu, and Zn were made on 23 samples from core GPC-5, a 29-m giant piston core from a water depth of 4583 m on the northeastern Bermuda Rise (33??41.2???N, 57??36.9???W). This area is characterized by rapid deposition of sediment transported by abyssal currents. Unsupported 230Th and 231Pa are present throughout the core but, because of large variations in the sedimentation rate, show marked departures from exponential decay with depth. The trend with depth of the 231Paex 230Thex ratio is consistent with the average accumulation rate of 36 cm/1000 y reported earlier on the basis of radiocarbon dating and CaCO3 stratigraphy. When expressed on a carbonate-free basis, concentrations of Mn, Co, Ni, Cu, Zn, 230Thex, and 231Paex all show cyclic variations positively correlated with those of CaCO3. The correlations can be explained by a model in which all of these constituents, including CaCO3, are supplied to the sediments from the water column at a constant rate. Concentration variations are controlled mainly by varying inputs of terrigenous detritus, with low inputs occurring during interglacials and high inputs during glacials. Relationships between the metal and 230Thex concentrations permit estimates of the rates at which the metals are removed to the sediment by scavenging from the water column. The results, in ??g/cm2-1000 y, are: 4300 ?? 1100 for Mn, 46 ?? 16 for Ni and 76 ?? 26 for Cu. These rates are somewhat larger than ocean-wide averages estimated by other methods, and the absolute rate of 230Th accumulation in GPC-5 averages about nine times higher than production in the overlying water column. This part of the Bermuda Rise and similar bottom-current deposits may act as important accumulators of elements scavenged from seawater. ?? 1982.

Applications of turbidity monitoring to forest management in California.

PubMed

Harris, Richard R; Sullivan, Kathleen; Cafferata, Peter H; Munn, John R; Faucher, Kevin M

2007-09-01

Many California streams have been adversely affected by sedimentation caused by historic and current land uses, including timber harvesting. The impacts of timber harvesting and logging transportation systems on erosion and sediment delivery can be directly measured, modeled, or inferred from water quality measurements. California regulatory agencies, researchers, and land owners have adopted turbidity monitoring to determine effects of forest management practices on suspended sediment loads and water quality at watershed, project, and site scales. Watershed-scale trends in sediment discharge and responses to current forest practices may be estimated from data collected at automated sampling stations that measure turbidity, stream flow, suspended sediment concentrations, and other water quality parameters. Future results from these studies will provide a basis for assessing the effectiveness of modern forest practice regulations in protecting water quality. At the project scale, manual sampling of water column turbidity during high stream flow events within and downstream from active timber harvest plans can identify emerging sediment sources. Remedial actions can then be taken by managers to prevent or mitigate water quality impacts. At the site scale, manual turbidity sampling during storms or high stream flow events at sites located upstream and downstream from new, upgraded, or decommissioned stream crossings has proven to be a valuable way to determine whether measures taken to prevent post-construction erosion and sediment production are effective. Turbidity monitoring at the project and site scales is therefore an important tool for adaptive management. Uncertainty regarding the effects of current forest practices must be resolved through watershed-scale experiments. In the short term, this uncertainty will stimulate increased use of project and site-scale monitoring.

Pyrite framboid diameter distribution in the Lower Oligocene black shales of the Vrancea Nappe as an indicator of changes in redox conditions, Eastern Outer Carpathians, Romania

NASA Astrophysics Data System (ADS)

Wendorff, Małgorzata; Marynowski, Leszek; Rospondek, Mariusz

2016-04-01

Studies of recent and ancient sediments revealed that the diameter distribution of pyrite framboids may be reliably used to characterise oxygen-restricted environments and distinguish ancient euxinic conditions (water column hydrogen sulphide bearing thus oxygen-free) from anoxic, non-sulfidic or dysoxic (oxygen-poor) conditions. Such diagnoses are of great importance when reconstructing palaeoenvironments in ancient basins and the processes of source rocks formation. During Oligocene to early Miocene time an extensive accumulation of organic matter (OM)-rich sediments occurred in the entire Paratethys including the Carpathian Foredeep, which was closed forming fold-thrust belt of the Outer Carpathians. These OM-rich black shales are represented by so-called Menilite shales, widely considered as hydrocarbon source rocks, which constitute as well a detailed archive for palaeoenvironmental changes. The purpose of this preliminary study is to characterise the depositional environment of the Lower Oligocene black shales basing on the pyrite framboid diameter distribution. Five samples of finely laminated black shales were selected from the Nechit section outcropping in the Bistrica half-window of the Vrancea Nappe in the Eastern Outer Carpathians, E Romania. At least 100 framboid diameters were measured on polished blocks using scanning electron microscope in a back-scattered electron mode. Framboids from four samples starting from the lowermost part of the section exhibit a narrow range of diameters from 1.0 to 11.5 μm; mean value ranges from 3.65 to 4.85 μm. Small-sized framboids (< 6 μm) account for 70% up to 91% of all framboids, while large framboids (>10 μm) are absent or rare (max. 2%). Within the sample from the uppermost part of the section framboids reveal more variable sizes, 2 - 25 μm, with mean value of 6.63 μm. Small framboids are still numerous (54%), however the amount of framboids >10 μm increases to 15%. The domination of small framboids with narrow size range in analysed samples, as well as lamination of rocks, suggest domination of anoxic / euxinic conditions during sedimentation of the Menilite shales. The transition into dysoxic bottom-water conditions can be evidenced by increased amount of larger framboids (up to 25 μm) in the upper part of the section. It has been concluded that framboids growing at interface of oxic/euxinic water column are in general smaller and less variable in size than framboids from sediments overlained by oxic or dysoxic water column. In the presented case, the prevalence of small framboids indicates that the water column euxinia could have developed, at least temporarily, during the deposition. Although the euxinia did not reached the photic zone as it reconstructed based on the occurrence of isorenieratane and its derivatives, e.g. C19 aryl isoprenoid in equivalent rocks from many locations of the Outer Carpathians. These biomarkers are derived from carotenoids biosynthesised by the photosynthetic green sulphur bacteria (Chlorobiaceae), anaerobic organisms requiring light and hydrogen sulphide for growth.

Quantitative Analysis of Uranium Accumulation on Sediments during Field-scale Biostimulation under Variable Bicarbonate Concentrations at the Rifle IFRC Site

NASA Astrophysics Data System (ADS)

Fox, P. M.; Davis, J. A.; Bargar, J.; Williams, K. H.; Singer, D. M.; Long, P.

2011-12-01

Bioremediation of uranium in subsurface environments is an approach that has been used at numerous field sites throughout the U.S in an attempt to lower dissolved U(VI) concentrations in groundwater. At the Rifle IFRC research site in Colorado, biostimulation of the native microbial population through acetate amendment for various periods of time has been tested in order to immobilize uranium through reduction U(VI) to U(IV). While this approach has successfully decreased U(VI) concentrations in the dissolved phase, often to levels below the EPA's maximum contaminant level of 0.13 μM, little work has examined the solid-phase accumulation of U during field-scale biostimulation. The lack of information on solid-phase U accumulation is due in large part to the difficulty of obtaining comparable pre- and post-biostimulation field sediment samples. In addition, the relatively low (<10 ppm) U concentrations present in most sediments preclude the use of spectroscopic techniques such as XAS for examining solid-phase U speciation. However, a recently developed technique of performing column experiments in situ has allowed us to overcome both of these problems, obtaining sediment samples which were exposed to the same biogeochemical conditions as subsurface sediments during the course of biostimulation. During the 2010 Rifle IFRC field experiment (dubbed "Super 8"), a number of in situ columns were deployed in various wells representing regions of the aquifer affected by acetate amendment (ambient bicarbonate) and concomitant acetate and bicarbonate amendment (elevated bicarbonate). Elevated levels of bicarbonate have been shown to cause desorption of U(VI) from the solid phase at the Rifle site under non-stimulated conditions, resulting in higher dissolved U(VI) concentrations in the aquifer. The Super 8 field experiment was designed in part to test the effect of elevated bicarbonate concentrations on U sequestration during biostimulation. Results from this experiment provide a comparison of temporal aqueous and solid-phase U concentrations under ambient and elevated bicarbonate conditions during field-scale biostimulation. Additionally, a subset of in situ columns amended with 20 μM U(VI) were analyzed by XANES in order to determine the relative importance of U(VI) and U(IV) in the solid phase. While the elevated bicarbonate concentrations did not impede reduction and sequestration of U, differences in the behavior of dissolved U(VI) after acetate amendment was stopped demonstrate the importance of U adsorption-desorption reactions in controlling dissolved U concentrations post-biostimulation.

Jack Dymond's "Fingerprints" on Sediment Chemistry, Biogeochemical Fluxes, and my Career

NASA Astrophysics Data System (ADS)

Leinen, M.

2004-12-01

I first met Jack Dymond as a graduate student at Oregon State University. He wasn't my thesis advisor. He wasn't even on my committee. But his ever so gentle counsel and his low key advice did much to shape my career, as a student, as a scientist, and later as an administrator of science. At the time, Jack was wading through the analysis of a very large number of surface sediment samples from the Nazca Plate as part of an IDOE project. The number and density of sampling was extraordinary for the time and his work showed that the geochemistry of the sediments could be deconvolved to understand the contributions of sediment sources over the entire plate. I had been planning to analyze DSDP samples from the equatorial Pacific to understand the history of siliceous sedimentation in that region and I began to talk with Jack about how I could use geochemical signatures to estimate the non-biogenic fraction of the sediment. When Jack's Nazca Plate paper came out, Debra Stakes and I decided to analyze all of my sample residues for the same elements that Jack had studied. In the only piece of bad advice that he ever gave me, Jack told me that it was a waste of time because there wouldn't be high enough concentrations of transition metals in the calcareous and siliceous sediments to measure. We insisted and Jack, in typical fashion, agreed to pay for reagents and give us instrument time without charge anyway. The larger than expected concentrations, and the even more surprising match between the accumulation rates of some the metals and the accumulation rates of biogenic sediment were the subject of many discussions, all of which ended in the need for more information on the composition, fluxes and transformations of biogenic sediment in the water column and in recent sediments. This, of course, became another of Jack's specialties: his designs for sediment traps were important contributions to the evolution of this important sampling device. His studies of fluxes in a wide variety of environments - from hydrothermal vent fields to Crater Lake --were critical to the development of modern biogeochemical cycling experiments and thinking. And this, of course, was only one of the fields in which he made major contributions.

The effect of river pulsing on sedimentation and nutrients in created riparian wetlands.

PubMed

Nahlik, Amanda M; Mitsch, William J

2008-01-01

Sedimentation under pulsed and steady-flow conditions was investigated in two created flow-through riparian wetlands in central Ohio over 2 yr. Hydrologic pulses of river water lasting for 6 to 8 d were imposed on each wetland from January through June during 2004. Mean inflow rates during pulses averaged 52 and 7 cm d(-1) between pulses. In 2005, the wetlands received a steady-flow regime of 11 cm d(-1) with no major hydrologic fluctuations. Thirty-two sediment traps were deployed and sampled once per month in April, May, June, and July for two consecutive years in each wetland. January through March were not sampled in either year due to frozen water surfaces in the wetlands. Gross sedimentation (sedimentation without normalizing for differences between years) was significantly greater in the pulsing study period (90 kg m(-2)) than in the steady-flow study period (64 kg m(-2)). When normalized for different hydrologic and total suspended solid inputs between years, sedimentation for April through July was not significantly different between pulsing and steady-flow study periods. Sedimentation for the 3 mo that received hydrologic pulses (April, May, and June) was significantly lower during pulsing months than in the corresponding steady-flow months. Large fractions of inorganic matter in collected sediments indicated that allochthonous inputs were the main contributor to sedimentation in these wetlands. Organic matter fractions of collected sediments were consistently greater in the steady-flow study period (1.8 g kg(-1)) than in the pulsed study period (1.5 g kg(-1)), consistent with greater primary productivity in the water column during steady-flow conditions.

Impact of sedimentation and particle fragmentation on the collapse of explosive volcanic eruption columns.

NASA Astrophysics Data System (ADS)

Michaud-Dubuy, A.; Carazzo, G.; Kaminski, E. C.

2017-12-01

High-velocity atmospheric turbulent jets produced by explosive volcanic eruptions can form a high buoyant Plinian plume or produce pyroclastic density currents (PDCs) when the column collapses. A major goal of physical volcanology is to determine the limit between the two flow regimes, as a function of source conditions. But their highly non-linear dynamics makes this prediction particularly difficult. Classically, in the so-called "dusty gas" hypothesis, the regime boundary is calculated as a function of the eruptive mass flux and the amount of gas dissolved in the magma. Here, we relax this hypothesis and account for the differential behavior between gas and particle, i.e. sedimentation. The sedimentation rate is calculated as a function of the particle size, which introduces the total grain-size distribution (TGSD) as a new model parameter. Here we further consider power-law TGSDs characterized by an exponent D. For low eruption rates (Vulcanian and sub-Plinian eruptions), the loss of particles by sedimentation is so large that it drains out the thermal reservoir available to heat the engulfed cold atmospheric air, which favors PDCs production. In powerful Plinian eruptions with a mass flux greater than 107 kg/s, the loss of particles by sedimentation is less important and its dominant effect is to decrease the column mass flux during its rise, which favors the formation of stable columns. In this case, we further obtain that coarse distributions promote the formation of stable plumes, a result at odds with previous studies. To interpret this conclusion, we reconsider the effect of gas entrapment by pumice at fragmentation and show that in general it has a dominant role on column collapse compared to particle sedimentation. However, for D values < 2.8, sedimentation and gas entrapment are of equal importance and act together to prevent the production of stable plumes. This latter conclusion is consistent with field data. We compare the predictions of the model including gas entrapment and sedimentation to two well constrained historical events, the Taupo 186 AD and Vesuvius 79 AD eruptions. In both cases, we obtain that the model should take into account not solely gas entrapment but also the open porosity to accurately reproduce field data.

Total selenium and selenium species in irrigation drain inflows to the Salton Sea, California, April and July 2008

USGS Publications Warehouse

May, Thomas W.; Walther, Michael J.; Saiki, Michael K.; Brumbaugh, William G.

2009-01-01

This report presents the results for two sampling periods (April 2008 and July 2008) during a 4-year monitoring program to characterize selenium concentrations in selected irrigation drains flowing into the Salton Sea, California. Total selenium, selenium species (dissolved selenite, selenate, organoselenium), and total suspended solids were determined in water samples and total selenium was determined in water column particulates and in sediment, detritus, and biota that included algae, plankton, midge larvae (family, Chironomidae), and two fish species - western mosquitofish (Gambusia affinis) and sailfin molly (Poecilia latipinna). In addition, sediments were analyzed for percent total organic carbon and particle size. Mean total selenium concentrations in water for both sampling periods ranged from 1.93 to 44.2 micrograms per liter, predominately as selenate, which is typical of waters where selenium is leached out of selenium-containing marine shales and associated soils under alkaline and oxidizing conditions. Total selenium concentrations (micrograms per gram dry weight) ranged as follows: algae, 0.75 to 3.39; plankton, 0.88 to 4.03; midges, 2.52 to 44.3; fish, 3.37 to 18.9; detritus, 1.11 to 13.6; sediment, 0.11 to 8.93.

Total selenium and selenium species in irrigation drain inflows to the Salton Sea, California, October 2008 and January 2009

USGS Publications Warehouse

May, Thomas W.; Walther, Michael J.; Saiki, Michael K.; Brumbaugh, William G.

2009-01-01

This report presents the results for two sampling periods (October 2008 and January 2009) during a 4-year monitoring program to characterize selenium concentrations in selected irrigation drains flowing into the Salton Sea, California. Total selenium, selenium species (dissolved selenite, selenate, organoselenium), and total suspended solids were determined in water samples. Total selenium also was determined in water column particulates and in sediment, detritus, and biota that included algae, plankton, midge larvae (family, Chironomidae), and two fish species (western mosquitofish, Gambusia affinis, and sailfin molly, Poecilia latipinna). In addition, sediments were analyzed for percent total organic carbon and particle size. Mean total selenium concentrations in water for both sampling periods ranged from 1.00 to 33.6 micrograms per liter, predominately as selenate, which is typical of waters where selenium is leached out of selenium-containing marine shales and associated soils under alkaline and oxidizing conditions. Total selenium concentrations (micrograms per gram dry weight) ranged as follows: algae, 1.52 to 8.26; plankton, 0.79 to 3.66; midges, 2.68 to 50.6; fish, 3.09 to 30.4; detritus, 1.78 to 58.0; and sediment, 0.42 to 10.0.

Organic matter diagenesis within the water column and surface sediments of the northern Sargasso Sea revealed by lipid biomarkers

NASA Astrophysics Data System (ADS)

Conte, M. H.; Pedrosa Pàmies, R.; Weber, J.

2017-12-01

The intensity of particle cycling processes within the mesopelagic and bathypelagic ocean controls the length scale of organic material (OM) remineralization and diagenetic transformations of OM composition through the water column and into the sediments. To elucidate the OM cycling in the oligotrophic North Atlantic gyre, we analyzed lipid biomarkers in the suspended particles (30-4400 m depth, 100 mab), the particle flux (500 m, 1500 m and 3200 m depth), and in the underlying surficial sediments (0-0.5 cm, 4500-4600 m depth) collected at the Oceanic Flux Program (OFP) time series site located 75km SE of Bermuda. Changes in lipid biomarker concentration and composition with depth highlight the rapid remineralization of OM within the upper mesopelagic layer and continuing diagenetic transformations of OM throughout the water column and within surficial sediments. Despite observed similarities in biomarker composition in suspended and sinking particles, results show there are also consistent differences in relative contributions of phytoplankton-, bacterial- and zooplankton-derived sources that are maintained throughout the water column. For example, sinking particles are more depleted in labile biomarkers (e.g. polyunsaturated fatty acids (PUFA)) and more enriched in bacteria-derived biomarkers (e.g. hopanoids and odd/branched fatty acids) and indicators of fecal-derived OM (e.g. saturated fatty acids, FA 18:1w9 and cholesterol) than in the suspended pool. Strong seasonality in deep (3200 m) fluxes of phytoplankton-derived biomarkers reflect the seasonal input of bloom-derived material to underlying sediments. The rapid diagenetic alteration of this bloom-derived input is evidenced by depletion of PUFAs and enrichment of microbial biomarkers (e.g. odd/branched fatty acids) in surficial sediments over a two month period.

Organic waste compounds in streams: Occurrence and aquatic toxicity in different stream compartments, flow regimes, and land uses in southeast Wisconsin, 2006–9

USGS Publications Warehouse

Baldwin, Austin K.; Corsi, Steven R.; Richards, Kevin D.; Geis, Steven W.; Magruder, Christopher

2013-01-01

An assessment of organic chemicals and aquatic toxicity in streams located near Milwaukee, Wisconsin, indicated high potential for adverse impacts on aquatic organisms that could be related to organic waste compounds (OWCs). OWCs used in agriculture, industry, and households make their way into surface waters through runoff, leaking septic-conveyance systems, regulated and unregulated discharges, and combined sewage overflows, among other sources. Many of these compounds are toxic at elevated concentrations and (or) known to have endocrine-disrupting potential, and often they occur as complex mixtures. There is still much to be learned about the chronic exposure effects of these compounds on aquatic populations. During 2006–9, the U.S. Geological Survey, in cooperation with the Milwaukee Metropolitan Sewerage District (MMSD), conducted a study to determine the occurrence and potential toxicity of OWCs in different stream compartments and flow regimes for streams in the Milwaukee area. Samples were collected at 17 sites and analyzed for a suite of 69 OWCs. Three types of stream compartments were represented: water column, streambed pore water, and streambed sediment. Water-column samples were subdivided by flow regime into stormflow and base-flow samples. One or more compounds were detected in all 196 samples collected, and 64 of the 69 compounds were detected at least once. Base-flow samples had the lowest detection rates, with a median of 12 compounds detected per sample. Median detection rates for stormflow, pore-water, and sediment samples were more than double that of base-flow samples. Compounds with the highest detection rates include polycyclic aromatic hydrocarbons (PAHs), insecticides, herbicides, and dyes/pigments. Elevated occurrence and concentrations of some compounds were detected in samples from urban sites, as compared with more rural sites, especially during stormflow conditions. These include the PAHs and the domestic waste-water-indicator compounds, among others. Urban runoff and storm-related leaks of sanitary sewers and (or) septic systems may be important sources of these and other compounds to the streams. The Kinnickinnic River, a highly urbanized site, had the highest detection rates and concentrations of compounds of all the sampled sites. The Milwaukee River near Cedarburg—one of the least urban sites—and the Outer Milwaukee Harbor site had the lowest detection rates and concentrations. Aquatic-toxicity benchmarks were exceeded for 12 of the 25 compounds with known benchmarks. The compounds with the greatest benchmark exceedances were the PAHs, both in terms of exceedance frequency (up to 93 percent for some compounds in sediment samples) and magnitude (concentrations up to 1,024 times greater than the benchmark value). Other compounds with toxicity-benchmark exceedances include Bis(2-ethylhexyl) phthalate (a plasticizer), 2-Methylnapthalene (a component of fuel and oil), phenol (an antimicrobial disinfectant with diverse uses), and 4-Nonylphenol (sum of all isomers; a detergent metabolite, among other uses). Analyzed as a mixture, the suite of PAH compounds were found to be potentially toxic for most non-base-flow samples. Bioassay tests were conducted on samples from 14 streams: Ceriodaphnia dubia in base-flow samples, Ceriodaphnia dubia and Hyallela azteca in pore-water samples, and Hyallela azteca and Chironomus tentans in sediment samples. The greatest adverse effect was observed in tests with Chironomus tentans from sediment samples. The weight of Chironomus tentans after exposure to sediments decreased with increased OWC concentrations. This was most evident in the relation between PAH results and Chironomus tentans bioassay results for the majority of samples; however, solvents and flame retardants appeared to be important for one site each. These results for PAHs were consistent with assessment of PAH potency factors for sediment, indicating that PAHs were likely to have adverse effects on aquatic organisms in many of the streams studied.

Modified sedimentation-dispersion model for solids in a three-phase slurry column

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smith, D.N.; Ruether, J.A.; Shah, Y.T.

1986-03-01

Solids distribution data for a three-phase, batch-fluidized slurry bubble column (SBC) are presented, using air as the gas phase, pure liquids and solutions as the liquid phase, and glass beads and carborundum catalyst powder as the solid phase. Solids distribution data for the three-phase SBC operated in a continuous mode of operation are also presented, using nitrogen as the gas phase, water as the liquid phase, and glass beads as the solid phase. A new model to provide a reasonable approach to predict solids concentration distributions for systems containing polydispersed solids is presented. The model is a modification of standardmore » sedimentation-dispersion model published earlier. Empirical correlations for prediction of hindered settling velocity and solids dispersion coefficient for systems containing polydispersed solids are presented. A new method of evaluating critical gas velocity (CGV) from concentrations of the sample withdrawn at the same port of the SBC is presented. Also presented is a new mapping for CGV which separates the two regimes in the SBC, namely, incomplete fluidization and complete fluidization.« less

Benthic flux of metals and nutrients into the water column of Lake Coeur d'Alene, Idaho report of an August, 1999, pilot study

USGS Publications Warehouse

Kuwabara, James S.; Berelson, William M.; Balistrieri, Laurie S.; Woods, Paul F.; Topping, Brent R.; Steding, Douglas J.; Krabbenhoft, David P.

2000-01-01

A field study was conducted between August 16-27, 1999, to provide the first direct measurements of the benthic flux of dissolved (0.2-micron filtered) solutes between the bottom sediment and water column at two sites in Lake Coeur d'Alene, Idaho. Trace metals (namely, cadmium, copper, manganese, mercury species, and zinc) and nutrients (namely, ammonia, nitrate plus nitrite, oxygen, orthophosphate and silica) were solutes of primary interest. Benthic flux (sometimes referred to as internal recycling) represents the transport of dissolved chemical species between the water column and the underlying sediment.

RESUSPENSION OF CONTAMINATED FIELD AND FORMULATED REFERENCE SEDIMENTS PART 1: EVALUATION OF METAL RELEASE UNDER CONTROLLED LABORATORY CONDITIONS

EPA Science Inventory

In aquatic systems where metal-contaminated sediments are present, the potential exists for metals to be released to the water column when sediment resuspension occurs. The release and partitioning behavior of sediment-bound, toxic heavy metals is not well understood during res...

Sediment oxygen profiles in a super-oxygenated antarctic lake

NASA Technical Reports Server (NTRS)

Wharton, R. A. Jr; Meyer, M. A.; McKay, C. P.; Mancinelli, R. L.; Simmons, G. M. Jr; Wharton RA, J. r. (Principal Investigator)

1994-01-01

Perennially ice-covered lakes are found in the McMurdo Dry Valleys of southern Victoria Land, Antarctica. In contrast to temperate lakes that have diurnal photic periods, antarctic (and arctic) lakes have a yearly photic period. An unusual feature of the antarctic lakes is the occurrence of O2 at supersaturated levels in certain portions of the water column. Here we report the first sediment O2 profiles obtained using a microelectrode from a perennially ice-covered antarctic lake. Sediment cores collected in January and October 1987 from Lake Hoare in Taylor Valley show oxygenation down to 15, and in some cases, 25 cm. The oxygenation of sediments several centimeters below the sediment-water interface is atypical for lake sediments and may be characteristic of perennially ice-covered lakes. There is a significant difference between the observed January and October sediment O2 profiles. Several explanations may account for the difference, including seasonality. A time-dependent model is presented which tests the feasibility of a seasonal cycle resulting from the long photoperiod and benthic primary production in sediments overlain by a highly oxygenated water column.

Mercury Cycling in Sediments of the Northeast Pacific Continental Margin Between Southern California and Central Oregon, USA

NASA Astrophysics Data System (ADS)

Heim, W. A.; Coale, K. H.; Chiswell, H.; Olson, A.; Martenuk, S.; Bonnema, A.; Weiss-Penzias, P. S.

2017-12-01

Monomethylmercury (MMHg) production by anaerobic bacteria in sediments is considered to be a dominate source of MMHg to sediments and overlying surface water in the coastal environment. In this study, we measured total mercury (Hgt) and MMHg sediment and pore water concentrations and calculated diffusive sediment water exchange fluxes in samples collected on the coastal shelf in the California Current System. Sediment cores and overlying water were collected from 20 stations using a slow-entry multi-corer deployed during 4 oceanographic cruises over two years. The upper few centimeters of undisturbed cores were sectioned at the following depth increments: 0.5, 1, 1.5, 2, 3, 4, 5 cm. Pore waters were extracted via centrifugation and the Hgt and MMHg gradients were used to calculate fluxes into the overlying water column based upon molecular diffusion alone. Sediment concentrations for Hgt and MMHg ranged from 50 to 2338 pmoles g-1 and 0.1 to 9 pmoles g-1 respectively. Pore water and overlying water MMHg concentrations ranged from 0.1 to 2.2 pM and 0.03 to 0.3 pM respectively. Diffusional Hgt and MMHg sediment water fluxes ranged from 1.4 to 7.3 pmoles m-2 d-1 and -0.03 to 1.7 pmoles m-2 d-1 respectively. While the gradients in MMHg showed significant and widespread flux that would indicate an input into the waters of the shelf these fluxes were insufficient to sustain elevated concentrations at the sediment boundary layer, or at the depth of the shelf in general. Measurements made on the northwestern Atlantic shelf are in general an order of magnitude greater than those observed here. We suggest that the narrow eastern shelf of the California Current with little allochthonous inputs contrasts sharply with the broad shelf of the Eastern Seaboard with significant organic carbon, riverine and anthropogenic inputs. In general, the narrow shelf of the California Current seems to reflect the pelagic processes of the off shore regions for this element where water column production predominates the formation of the methylated forms.

Investigating the importance of sediment resuspension in Alexandrium fundyense cyst population dynamics in the Gulf of Maine

USGS Publications Warehouse

Butman, Bradford; Aretxabaleta, Alfredo L.; Dickhudt, Patrick J.; Dalyander, P. Soupy; Sherwood, Christopher R.; Anderson, Donald M.; Keafer, Bruce A.; Signell, Richard P.

2014-01-01

Cysts of Alexandrium fundyense, a dinoflagellate that causes toxic algal blooms in the Gulf of Maine, spend the winter as dormant cells in the upper layer of bottom sediment or the bottom nepheloid layer and germinate in spring to initiate new blooms. Erosion measurements were made on sediment cores collected at seven stations in the Gulf of Maine in the autumn of 2011 to explore if resuspension (by waves and currents) could change the distribution of over-wintering cysts from patterns observed in the previous autumn; or if resuspension could contribute cysts to the water column during spring when cysts are viable. The mass of sediment eroded from the core surface at 0.4 Pa ranged from 0.05 kg m−2 near Grand Manan Island, to 0.35 kg m−2 in northern Wilkinson Basin. The depth of sediment eroded ranged from about 0.05 mm at a station with sandy sediment at 70 m water depth on the western Maine shelf, to about 1.2 mm in clayey–silt sediment at 250 m water depth in northern Wilkinson Basin. The sediment erodibility measurements were used in a sediment-transport model forced with modeled waves and currents for the period October 1, 2010 to May 31, 2011 to predict resuspension and bed erosion. The simulated spatial distribution and variation of bottom shear stress was controlled by the strength of the semi-diurnal tidal currents, which decrease from east to west along the Maine coast, and oscillatory wave-induced currents, which are strongest in shallow water. Simulations showed occasional sediment resuspension along the central and western Maine coast associated with storms, steady resuspension on the eastern Maine shelf and in the Bay of Fundy associated with tidal currents, no resuspension in northern Wilkinson Basin, and very small resuspension in western Jordan Basin. The sediment response in the model depended primarily on the profile of sediment erodibility, strength and time history of bottom stress, consolidation time scale, and the current in the water column. Based on analysis of wave data from offshore buoys from 1996 to 2012, the number of wave events inducing a bottom shear stress large enough to resuspend sediment at 80 m ranged from 0 to 2 in spring (April and May) and 0 to 10 in winter (October through March). Wave-induced resuspension is unlikely in water greater than about 100 m deep. The observations and model results suggest that a millimeter or so of sediment and associated cysts may be mobilized in both winter and spring, and that the frequency of resuspension will vary interannually. Depending on cyst concentration in the sediment and the vertical distribution in the water column, these events could result in a concentration in the water column of at least 104 cysts m−3. In some years, resuspension events could episodically introduce cysts into the water column in spring, where germination is likely to be facilitated at the time of bloom formation. An assessment of the quantitative effects of cyst resuspension on bloom dynamics in any particular year requires more detailed investigation.

Mathematical model simulation of a diesel spill in the Potomac River

DOE Office of Scientific and Technical Information (OSTI.GOV)

Feng, S.S.; Nicolette, J.P.; Markarian, R.K.

1995-12-31

A mathematical modeling technique was used to simulate the transport and fate of approximately 400,000 gallons of spilled diesel fuel and its impact on the aquatic biota in the Potomac River and Sugarland Run. Sugarland Run is a tributary about 21 miles upstream from Washington, DC. The mass balance model predicted the dynamic (spatial and temporal) distribution of spilled oil. The distributions were presented in terms of surface oil slick and sheen, dissolved and undissolved total petroleum hydrocarbons (TPH) in the water surface, water column, river sediments, shoreline and atmosphere. The processes simulated included advective movement, dispersion, dissolution, evaporation, volatilization,more » sedimentation, shoreline deposition, biodegradation, and removal of oil from cleanup operations. The model predicted that the spill resulted in a water column dissolved TPH concentration range of 0.05 to 18.6 ppm in Sugarland Run. The spilled oil traveled 10 miles along Sugarland Run before it reached the Potomac River. At the Potomac River, the water column TPH concentration was predicted to have decreased to the range of 0.0 to 0.43 ppm. These levels were consistent with field samples. To assess biological injury, the model used 4, 8, 24, 48, and 96-hr LC values in computing the fish injury caused by the fuel oil. The model used the maximum running average of dissolved TPH and exposure time to predict levels of fish mortality in the range of 38 to 40% in Sugarland Run. This prediction was consistent with field fisheries surveys. The model also computed the amount of spilled oil that adsorbed and settled into the river sediments.« less

Concentrations, loads, and yields of particle-associated contaminants in urban creeks, Austin, Texas, 1999-2004

USGS Publications Warehouse

Mahler, B.J.; Van Metre, P.C.; Wilson, J.T.; Guilfoyle, A.L.; Sunvison, M.W.

2006-01-01

Concentrations, loads, and yields of particle-associated (hydrophobic) contaminants (PACs) in urban runoff in creeks in Austin, Texas, were characterized using an innovative approach: large-volume suspended-sediment sampling. This approach isolates suspended sediment from the water column in quantities sufficient for direct chemical analysis of PACs. During 1999-2004, samples were collected after selected rain events from each of five stream sites and Barton Springs for a study by the U.S. Geological Survey, in cooperation with the City of Austin. Sediment isolated from composited samples was analyzed for major elements, metals, organochlorine compounds, and polycyclic aromatic hydrocarbons (PAHs). In addition, at the Shoal Creek and Boggy Creek sites, individual samples for some events were analyzed to investigate within-event variation in sediment chemistry. Organochlorine compounds detected in suspended sediment included chlordane, dieldrin, DDD, DDE, DDT, and polychlorinated biphenyls (PCBs). Concentrations of PACs varied widely both within and between sites, with higher concentrations at the more urban sites and multiple nondetections at the least-urban sites. Within-site variation for metals and PAHs was smaller than between-site variation, and concentrations and yields of these and the organochlorine compounds correlated positively to the percentage of urban land use in the watershed. Loads of most PACs tested correlated significantly with suspended-sediment loads. Concentrations of most PACs correlated strongly with three measures of urban land use. Variation in suspended-sediment chemistry during runoff events was investigated at the Shoal and Boggy Creek sites. Five of the eight metals analyzed, dieldrin, chlordane, PCBs, and PAHs were detected at the highest concentrations in the first sample collected at the Shoal Creek site, a first-flush effect, but not at the Boggy Creek site. Temporal patterns in concentrations of DDT and its breakdown products varied from one event to the next. In spite of the first-flush effect in concentrations at the Shoal Creek site, most of the contaminant load was transported at peak discharge, when suspended-sediment concentration and load are maximum.

Continental shelf sediment dynamics in the Anthropocene: A global shift

NASA Astrophysics Data System (ADS)

Oberle, Ferdinand K. J.; Puig, Pere; Martin, Jacobo

2017-04-01

Recent technological advances in remote sensing and deep marine sampling have revealed the extent and magnitude of the anthropogenic impacts to the seafloor. In particular, bottom trawling, a fishing technique consisting of dragging a net and fishing gear over the seafloor to capture bottom-dwelling living resources has gained attention due to its destructive effects on the seabed. Trawling gear produces acute impacts on biota and the physical substratum of the seafloor by disrupting the sediment column structure, overturning boulders, resuspending sediments and imprinting deep scars on muddy bottoms. Also, the repetitive passage of trawling gear over the same areas creates long-lasting, cumulative impacts that modify the cohesiveness and texture of sediments. It can be asserted nowadays that due to its recurrence, mobility and wide geographical extent, industrial trawling has become a major force driving seafloor change and affecting not only its physical integrity on short spatial scales but also imprinting measurable modifications to the geomorphology of entire continental margins.

Tracing mercury pathways in Augusta Bay (southern Italy) by total concentration and isotope determination.

PubMed

Bonsignore, M; Tamburrino, S; Oliveri, E; Marchetti, A; Durante, C; Berni, A; Quinci, E; Sprovieri, M

2015-10-01

The mercury (Hg) pollution of sediments is the main carrier of Hg for the biota and, subsequently, for the local fish consumers in Augusta Bay area (SE Sicily, Italy), a coastal marine system affected by relevant sewage from an important chlor-alkali factory. This relationship was revealed by the determination of Mass Dependent (MDF) and Mass Independent Fractionation (MIF) of Hg isotopes in sediment, fish and human hair samples. Sediments showed MDF but no MIF, while fish showed MIF, possibly due to photochemical reduction in the water column and depending on the feeding habitat of the species. Benthic and demersal fish exhibited MDF similar to that of sediments in which anthropogenic Hg was deposited, while pelagic organisms evidenced higher MDF and MIF due to photoreduction. Human hair showed high values of δ(202)Hg (offset of +2.2‰ with respect to the consumed fish) and Δ(199)Hg, both associated to fish consumption. Copyright © 2015 Elsevier Ltd. All rights reserved.

Chemometric techniques in distribution, characterisation and source apportionment of polycyclic aromatic hydrocarbons (PAHS) in aquaculture sediments in Malaysia.

PubMed

Retnam, Ananthy; Zakaria, Mohamad Pauzi; Juahir, Hafizan; Aris, Ahmad Zaharin; Zali, Munirah Abdul; Kasim, Mohd Fadhil

2013-04-15

This study investigated polycyclic aromatic hydrocarbons (PAHs) pollution in surface sediments within aquaculture areas in Peninsular Malaysia using chemometric techniques, forensics and univariate methods. The samples were analysed using soxhlet extraction, silica gel column clean-up and gas chromatography mass spectrometry. The total PAH concentrations ranged from 20 to 1841 ng/g with a mean of 363 ng/g dw. The application of chemometric techniques enabled clustering and discrimination of the aquaculture sediments into four groups according to the contamination levels. A combination of chemometric and molecular indices was used to identify the sources of PAHs, which could be attributed to vehicle emissions, oil combustion and biomass combustion. Source apportionment using absolute principle component scores-multiple linear regression showed that the main sources of PAHs are vehicle emissions 54%, oil 37% and biomass combustion 9%. Land-based pollution from vehicle emissions is the predominant contributor of PAHs in the aquaculture sediments of Peninsular Malaysia. Copyright © 2013 Elsevier Ltd. All rights reserved.

Natural causes of changes in marine environment: Mercury speciation and distribution in anchialine caves

NASA Astrophysics Data System (ADS)

Kwokal, Željko; Cukrov, Neven; Cuculić, Vlado

2014-12-01

Mercury speciation and distribution were assessed, for the first time, from the water, sediment, rock, soil and air of anchialine caves. We evaluated the origin and distribution of four mercury species (total (THg), reactive (RHg), dissolved gaseous mercury (DGM) and monomethylmercury (MeHg)) in water from Bjejajka cave (Bjejajka) and Lenga Pit (Lenga) in the Croatian Adriatic Sea from 2006 to 2011. Concentrations of all mercury species were elevated at both sites compared to adjacent seawater, which had concentration range of 0.5-2.4 ng L-1 for THg, 0.06-0.2 ng L-1 for RHg, 0.02-0.07 ng L-1 for DGM, and 0.01-0.02 ng L-1 for MeHg. In Bjejajka, the maximum THg concentration (350 ng L-1) in the middle layer (3-7 m) of the 12 m deep stratified water column was up to 3 orders of magnitude greater than in adjacent seawater. During and after the rainy sampling periods in January 2009 and 2010, mixing of Bjejajka water column resulted in elevated concentrations, up to 3700 ng L-1 of THg (4 orders of magnitude higher compared to values in nearby seawater) in the bottom water layer. MeHg concentrations in the Bjejajka water column were also considerably elevated (0.7-6.3 ng L-1) compared to the surrounding seawater (0.01-0.02 ng L-1). The vertical distribution of MeHg concentrations followed that of THg, however the ratio of MeHg/THg above the Bjejajka halocline was drastically higher (up to 57%) compared to MeHg proportion (1-2 %) below the halocline, which was similar to that of surface seawater. In sediment of Bjejajka, THg concentrations were up to 3.3 mg kg-1, considerably above concentrations in unpolluted Adriatic marine sediment (0.1-0.3 mg kg-1). The highest THg amounts found in soil and air were inside and in close proximity to Bjejajka, while THg in rock (≤0.01 mg kg-1) were below reported values for unaltered carbonates. Laboratory experiments indicate that bat guano was the major source of elevated mercury concentrations in the water column and sediment of Bjejajka. Concentrations of THg in bat guano were up to 0.45 mg kg-1, above the range of THg concentrations found in unpolluted marine sediment. Seventy-two days after the addition of bat guano in solution, a 100-fold higher Hg concentration was observed, from 2.5 up to 252 ng L-1. In Lenga bat guano was not spotted and THg water and sediment concentrations were drastically lower, mostly below 7 ng L-1 and 0.8 mg kg-1, respectively.

Organic geochemistry and brine composition in Great Salt, Mono, and Walker Lakes

USGS Publications Warehouse

Domagalski, Joseph L.; Orem, W.H.; Eugster, H.P.

1989-01-01

Samples of Recent sediments, representing up to 1000 years of accumulation, were collected from three closed basin lakes (Mono Lake, CA, Walker Lake, NV, and Great Salt Lake, UT) to assess the effects of brine composition on the accumulation of total organic carbon, the concentration of dissolved organic carbon, humic acid structure and diagenesis, and trace metal complexation. The Great Salt Lake water column is a stratified Na-Mg-Cl-SO4 brine with low alkalinity. Algal debris is entrained in the high density (1.132-1.190 g/cc) bottom brines, and in this region maximum organic matter decomposition occurs by anaerobic processes, with sulfate ion as the terminal electron acceptor. Organic matter, below 5 cm of the sediment-water interface, degrades at a very slow rate in spite of very high pore-fluid sulfate levels. The organic carbon concentration stabilizes at 1.1 wt%. Mono Lake is an alkaline (Na-CO3-Cl-SO4) system. The water column is stratified, but the bottom brines are of lower density relative to the Great Salt Lake, and sedimentation of algal debris is rapid. Depletion of pore-fluid sulfate, near l m of core, results in a much higher accumulation of organic carbon, approximately 6 wt%. Walker Lake is also an alkaline system. The water column is not stratified, and decomposition of organic matter occurs by aerobic processes at the sediment-water interface and by anaerobic processes below. Total organic carbon and dissolved organic carbon concentrations in Walker Lake sediments vary with location and depth due to changes in input and pore-fluid sulfate concentrations. Nuclear magnetic resonance studies (13C) of humic substances and dissolved organic carbon provide information on the source of the Recent sedimentary organic carbon (aquatic vs. terrestrial), its relative state of decomposition, and its chemical structure. The spectra suggest an algal origin with little terrestrial signature at all three lakes. This is indicated by the ratio of aliphatic to aromatic carbon and the absence of chemical structures indicative of the lignin of vascular plants. The dissolved organic carbon of the Mono Lake pore fluids is structurally related to humic acid and is also related to carbohydrate metabolism. The alkaline pore fluids, due to high pH, solubilize high molecular weight organic matter from the sediments. This hydrophilic material is a metal complexing agent. Despite very high algal productivities, organic carbon accumulation can be low in stratified lakes if the anoxic bottom waters are hypersaline with high concentrations of sulfate ion. Labile organic matter is recycled to the water column and the sedimentary organic matter is relatively nonsusceptible to bacterial metabolism. As a result, pore-fluid dissolved organic carbon and metal-organic complexation are low. ?? 1989.

15N indicates an active N-cycling microbial community in low carbon, freshwater sediments.

NASA Astrophysics Data System (ADS)

Sheik, C.

2017-12-01

Earth's large lakes are unique aquatic ecosystems, but we know little of the microbial life driving sedimentary biogeochemical cycles and ultimately the isotopic record. In several of these large lakes, water column productivity is constrained by element limitation, such as phosphorus and iron, creating oligotrophic water column conditions that drive low organic matter content in sediments. Yet, these sediments are biogeochemically active and have been shown to have oxygen consumption rates akin to pelagic ocean sediments and complex sulfur cycling dynamics. Thus, large oligotrophic lakes provide unique and interesting biogeochemical contrast to highly productive freshwater and coastal marine systems. Using Lake Superior as our study site, we found microbial community structure followed patterns in bulk sediment carbon and nitrogen concentrations. These observed patterns were loosely driven by land proximity, as some stations are more coastal and have higher rates of sedimentation, allochthonous carbon inputs and productivity than pelagic sites. Interestingly, upper sediment carbon and nitrogen stable isotopes were quite different from water column. Sediment carbon and nitrogen isotopes correlated significantly with microbial community structure. However, 15N showed much stronger correlation than 13C, and became heavier with core depth. Coinciding with the increase in 15N values, we see evidence of both denitrification and anammox processes in 16S rRNA gene libraries and metagenome assembled genomes. Given that microorganisms prefer light isotopes and that these N-cycling processes both contribute to N2 production and efflux from the sediment, the increase in 15N with sediment depth suggests microbial turnover. Abundance of these genomes also varies with depth suggesting these novel microorganisms are partitioning into specific sediment geochemical zones. Additionally, several of these genomes contain genes involved in sulphur cycling, suggesting a dual biogeochemical role and potential for a cryptic sulfur cycle. Together, Lake Superior sediments offer a glimpse into microbial metabolism in carbon limited environments. Further the pervasiveness of co-metabolic pathways suggests interpretation of isotopic records may be messier than previously thought.

Consequences of spring phytodetritus sedimentation on the benthic compartment along a depth gradient in the Eastern English Channel.

PubMed

Denis, Lionel; Desroy, Nicolas

2008-11-01

Phaeocystis blooms are of major importance in the Eastern English Channel, where they significantly contribute to spring organic matter input with chlorophyll concentrations commonly higher than 30 microgl(-1) in the water column. Post-bloom deposition of Phaeocystis derived mucilaginous compounds has been shown to have a major importance on benthic intertidal systems, but resulting mineralization processes and consequences on the macrobenthic compartment remain poorly documented in subtidal areas. In this frame, a study was performed along the French coast of the English Channel to quantify mineralization processes, as well as potential consequences on subtidal sediments, especially their geochemistry and associated macrofaunal communities. Seven stations were studied along a depth gradient during four cruises: before (March), during (April, May) and after (June) the spring bloom. Sediment characteristics and organic carbon content were described, as well as sediment-water fluxes of oxygen and ammonium. Macrofaunal characteristics were also analyzed. Stations were chosen as representative of the various benthic communities present in the area, which are directly linked to the granulometric characteristics of the sediments. To account for the general functioning of the water column, characterized by a coastal flow where higher concentrations of Phaeocystis are generally recorded, similar communities were sampled inshore and offshore, when possible: (i) the Abra alba community located only close to the coast, (ii) the Ophelia borealis community located inshore and offshore, and (iii) the Amphioxus lanceolatus community located inshore and offshore. Generally, low exchange rates of oxygen and ammonium were measured (respectively, in the range 50-150 micromol O2 m(-2)h(-1) and -25 to 35 micromol NH4+ m(-2)h(-1)) between the water column and the muddy-sand to coarse sand permeable sediments, as a consequence of the low organic carbon content due to the high hydrodynamic forcing. As a consequence of organic matter accumulation in surficial sediments probably resulting from Phaeocystis post-bloom deposition, an increase of sediment oxygen demand and ammonium release was clearly evidenced up to 660 micromol O2 m(-2)h(-1) and 205 micromol NH4+ m(-2)h(-1) in May, only in stations located close to the coast (<8 kms), in the A. alba community. Despite those significant biogeochemical changes in surficial sediments, no significant consequence was pointed out on macrofauna, neither in the O. borealis and A. lanceolatus communities, nor in the coastal A. alba community. Most of the temporal variations recorded might be attributed to the common spring population dynamics, but this study highlights the potential use of geochemical parameters as a forewarning signal of benthic disequilibrium.

In situ determination of flocculated suspended material settling velocities and characteristics using a floc camera

USGS Publications Warehouse

Schoellhamer, David H.; Haught, Dan; Manning, Andrew

2012-01-01

Estimates of suspended sediment settling are necessary for numerical sediment models, water quality studies, and rehabilitation of coastal ecosystems. Settling of cohesive sediment, which is common in estuaries, is more difficult to quantify than noncohesive sediment because of flocculation. Flocs are composed of an aggregation of finer silts, clays, and organic material. Floc characteristics, such as the diameter, density, porosity, and water content determine floc settling velocities. A floc camera provides the ability to capture the settling velocities and other desired characteristics of individual flocs in situ. Water samples taken using a Van Dorn sampler are immediately subsampled using a pipette and transferred to the floc camera. The Perspex settling column is outfitted with a LED backlighting to distinguish flocs. The floc camera’s high pixel and temporal resolution allows image analysis software to detect individual flocs and process floc statistics per image. Observed changes in floc location with respect to time presents a way of calculating settling velocities. This work presents results of validation tests with known sediment size distributions and of deployment of the camera during a field study.

Physical versus chemical effects on bacterial and bromide transport as determined from on site sediment column pulse experiments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, James A.; Mailloux, Brian J.; Onstott, Tullis C.

2005-02-01

Twenty eight bacterial and Br transport experiments were performed in the field to determine the effects of physical and chemical heterogeneity of the aquifer sediment. The experiments were performed using groundwater from two field locations to examine the effects of groundwater chemistry on transport. Groundwater was extracted from multilevel samplers and pumped through 7 cm long columns of intact sediment or re-packed sieved and coated or uncoated sediment from the underlying aquifer. Two bacterial strains, Comamonas sp. DA001 and Paenibacillus polymyxa FER-02, were injected along with Br into the influent end of the columns to examine the effect of cellmore » morphology and surface properties on bacterial transport. The effect of column sediment grain size and mineral coatings coupled with groundwater geochemistry were also delineated. Significant irreversible attachment of DA001 was observed in the Fe oxyhydroxide coated columns, but only in the sub-oxic groundwater where the concentrations of dissolved organic carbon (DOC) were ca. 1 ppm. In the oxic groundwater where DOC was ca. 8 ppm, little attachment of DA001 to the Fe oxyhydroxide coated columns was observed. This indicates that DOC can significantly reduce bacterial attachment due electrostatic interactions. The larger and more negatively charged FER-02 displayed increasing attachment with decreasing grain size regardless of DOC concentration, and modeling of FER-02 attachment revealed that the presence of Fe and Al coatings on the sediment also promoted attachment. Finally, the presence of Al coatings and Al containing minerals appeared to significantly retard the Br tracer regardless of the concentration of DOC. These findings suggest that DOC in shallow oxic groundwater aquifers can significantly enhance the transport of bacteria by reducing attachment to Fe, Mn and Al oxyhydroxides. This effect is profound for weakly charged, hydrophilic bacteria and may contribute to differences in observations between laboratory experiments verses field-scale investigations particularly if the groundwater pH remains circum-neutral and Fe oxyhydroxide phases exist. These observations validate the novel approach taken in the experiments outlined here of performing laboratory-scale experiments on site to facilitate the use of fresh groundwater and thus be more representative of in situ groundwater conditions.« less

Hidden plastics of Lake Ontario, Canada and their potential preservation in the sediment record.

PubMed

Corcoran, Patricia L; Norris, Todd; Ceccanese, Trevor; Walzak, Mary Jane; Helm, Paul A; Marvin, Chris H

2015-09-01

Microplastics are a source of environmental pollution resulting from degradation of plastic products and spillage of resin pellets. We report the amounts of microplastics from various sites of Lake Ontario and evaluate their potential for preservation in the sediment record. A total of 4635 pellets were sampled from the Humber Bay shoreline on three sampling dates. Pellet colours were similar to those from the Humber River bank, suggesting that the river is a pathway for plastics transport into Lake Ontario. Once in the lake, high density microplastics, including mineral-polyethylene and mineral-polypropylene mixtures, sink to the bottom. The minerals may be fillers that were combined with plastics during production, or may have adsorbed to the surfaces of the polymers in the water column or on the lake bottom. Based on sediment depths and accumulation rates, microplastics have accumulated in the offshore region for less than 38 years. Their burial increases the chance of microplastics preservation. Shoreline pellets may not be preserved because they are mingled with organic debris that is reworked during storm events. Copyright © 2015 Elsevier Ltd. All rights reserved.

Benthic exchange and biogeochemical cycling in permeable sediments.

PubMed

Huettel, Markus; Berg, Peter; Kostka, Joel E

2014-01-01

The sandy sediments that blanket the inner shelf are situated in a zone where nutrient input from land and strong mixing produce maximum primary production and tight coupling between water column and sedimentary processes. The high permeability of the shelf sands renders them susceptible to pressure gradients generated by hydrodynamic and biological forces that modulate spatial and temporal patterns of water circulation through these sediments. The resulting dynamic three-dimensional patterns of particle and solute distribution generate a broad spectrum of biogeochemical reaction zones that facilitate effective decomposition of the pelagic and benthic primary production products. The intricate coupling between the water column and sediment makes it challenging to quantify the production and decomposition processes and the resultant fluxes in permeable shelf sands. Recent technical developments have led to insights into the high biogeochemical and biological activity of these permeable sediments and their role in the global cycles of matter.

Organic compound composition in soil and sediments collected in Jackson, Mississippi.

PubMed

Gołębiowski, Marek; Stepnowski, Piotr; Hemmingway, Tometrick; Leszczyńska, Danuta

2016-01-01

The aim of our study was to identify organic pollutants found in soil and sediment samples collected within the Jackson, MS metropolitan area. The chemical characterization of the organic compound fractions in soil and sediment samples was carried out by separating the organic fraction using column chromatography (CC) and quantitatively analyzing the polycyclic aromatic hydrocarbons (PAHs), n-alkanes and other organic compounds using gas chromatography-electron impact mass spectrometry (GC-MS). Fifty-six compounds were identified and quantified in the soil samples and 33 compounds were identified and quantified in the sediment samples. The PAHs, n-alkanes and other organic compound profiles in the soil and sediment samples were compared. The percentage contents of the organic compounds in the soil samples were very diverse (from traces to 12.44 ± 1.47%). The compounds present in the highest concentrations were n-alkanes: n-C31 (12.44 ± 1.47%), n-C29 (11.64 ± 1.21%), and n-C33 (8.95 ± 1.08%). The components occurring in smaller quantities (from 1% to 5%) were 2 PAHs (fluoranthene 1.28 ± 0.25%, pyrene 1.16 ± 0.20%), 10 n-alkanes from n-C21 (1.25 ± 0.29%) to n-C32 (2.67 ± 0.52%) and 11 other compounds (e.g., 2-pentanol, 4-methyl (3.33 ± 0.44%), benzyl butyl phthalate (4.25 ± 0.59%), benzenedicarboxylic acid (1.14 ± 0.08%), ethane, 1,1-diethoxy (3.15 ± 0.41) and hexadecanoic acid (2.52 ± 0.34). The soil samples also contained 30 compounds present in concentrations <1% (e.g., anthracene (0.13 ± 0.04%), n-C20 (0.84 ± 0.21%) and acetic acid (0.12 ± 0.04%). The compounds present in the highest concentrations in the sediment samples were PAHs: pyrene (7.73 ± 1.15%) and fluoranthene (6.23 ± 1.07%) and n-alkanes: n-C31 (6.74 ± 1.21%), n-C29 (6.65 ± 0.98%) and n-C27 (6.13 ± 1.09%). The remaining organic compounds were present in smaller quantities (< 5%).

Sewage outflow impact and temporal variation of butyltins in an intermittent French River

NASA Astrophysics Data System (ADS)

Chahinian, Nanée.; Bancon-Montigny, Chrystelle; Brunel, Victor; Aubert, Gabriel; Saarbach, Bruno; Tournoud, Marie-George; Perrin, Jean-Louis

2010-05-01

Organotins (OTs) are anthropogenic molecules used in many industrial applications for their thermoresistant and biocidal properties. Because of their toxicity and widespread use these molecules are on the EU water directive's list of prioritary substances. Organotins are prone to adsorption, can bond easily to particulate matter and "migrate" from the water column unto the sediments where their half-life can extend to a few decades. Recent surveys in various EU countries have indicated the presence of OTs in surface and sewage waters. The objective of this work is to study the temporal evolution of butyl, octyl and phenyl tins in contrasted flow conditions, in the sediments and water column of an intermittent river reach located to the right of an extensive sewage treatment plant (STP). The study zone is a reach of the Vène river located in southern France. The Vène is a major tributary of the Thau lagoon which is an important shellfish farming site and thus very vulnerable to OT contamination. Butyltin, trace metal and DOC concentrations were measured on water and sediment samples collected during two consecutive and contrasted hydrological years. The input and output of the STW was sampled in order to assess its impact on butyltin degradation and transformation. The results revealed the presence of butyltins at concentrations exceeding the EU and French pollution limits regularly. Very low concentrations of phenyltins were found in the water samples thus indicating that there is little use of OTs based pesticides in the area. The OTs concentrations were systematically higher during the wetter year, probably because of higher and more frequent wash off contribution to the reach and minimal dilution along the rivercourse. By contrast, the STW's impact in terms of OTs flux is more important during dry periods when there is less dilution in the river. Although the STW's outflows contained less OTs than the inputs, its efficiency in terms of OTs degradation could not be quantified from the available data as no information was available on the OTs concentrations in the deposited sediments of the lagoons. Future efforts will concentrate on a thorough analysis of OTs degradation within the STW.

Functional trait responses to sediment deposition reduce macrofauna-mediated ecosystem functioning in an estuarine mudflat

NASA Astrophysics Data System (ADS)

Mestdagh, Sebastiaan; Bagaço, Leila; Braeckman, Ulrike; Ysebaert, Tom; De Smet, Bart; Moens, Tom; Van Colen, Carl

2018-05-01

Human activities, among which dredging and land use change in river basins, are altering estuarine ecosystems. These activities may result in changes in sedimentary processes, affecting biodiversity of sediment macrofauna. As macrofauna controls sediment chemistry and fluxes of energy and matter between water column and sediment, changes in the structure of macrobenthic communities could affect the functioning of an entire ecosystem. We assessed the impact of sediment deposition on intertidal macrobenthic communities and on rates of an important ecosystem function, i.e. sediment community oxygen consumption (SCOC). An experiment was performed with undisturbed sediment samples from the Scheldt river estuary (SW Netherlands). The samples were subjected to four sedimentation regimes: one control and three with a deposited sediment layer of 1, 2 or 5 cm. Oxygen consumption was measured during incubation at ambient temperature. Luminophores applied at the surface, and a seawater-bromide mixture, served as tracers for bioturbation and bio-irrigation, respectively. After incubation, the macrofauna was extracted, identified, and counted and then classified into functional groups based on motility and sediment reworking capacity. Total macrofaunal densities dropped already under the thinnest deposits. The most affected fauna were surficial and low-motility animals, occurring at high densities in the control. Their mortality resulted in a drop in SCOC, which decreased steadily with increasing deposit thickness, while bio-irrigation and bioturbation activity showed increases in the lower sediment deposition regimes but decreases in the more extreme treatments. The initial increased activity likely counteracted the effects of the drop in low-motility, surficial fauna densities, resulting in a steady rather than sudden fall in oxygen consumption. We conclude that the functional identity in terms of motility and sediment reworking can be crucial in our understanding of the regulation of ecosystem functioning and the impact of habitat alterations such as sediment deposition.

Pesticide and trace metal occurrence and aquatic benchmark exceedances in surface waters and sediments of urban wetlands and retention ponds in Melbourne, Australia.

PubMed

Allinson, Graeme; Zhang, Pei; Bui, AnhDuyen; Allinson, Mayumi; Rose, Gavin; Marshall, Stephen; Pettigrove, Vincent

2015-07-01

Samples of water and sediments were collected from 24 urban wetlands in Melbourne, Australia, in April 2010, and tested for more than 90 pesticides using a range of gas chromatographic (GC) and liquid chromatographic (LC) techniques, sample 'hormonal' activity using yeast-based recombinant receptor-reporter gene bioassays, and trace metals using spectroscopic techniques. At the time of sampling, there was almost no estrogenic activity in the water column. Twenty-three different pesticide residues were observed in one or more water samples from the 24 wetlands; chemicals observed at more than 40% of sites were simazine (100%), atrazine (79%), and metalaxyl and terbutryn (46%). Using the toxicity unit (TU) concept, less than 15% of the detected pesticides were considered to pose an individual, short-term risk to fish or zooplankton in the ponds and wetlands. However, one pesticide (fenvalerate) may have posed a possible short-term risk to fish (log10TUf > -3), and three pesticides (azoxystrobin, fenamiphos and fenvalerate) may have posed a risk to zooplankton (logTUzp between -2 and -3); all the photosystem II (PSII) inhibiting herbicides may have posed a risk to primary producers in the ponds and wetlands (log10TUap and/or log10TUalg > -3). The wetland sediments were contaminated with 16 different pesticides; no chemicals were observed at more than one third of sites, but based on frequency of detection and concentrations, bifenthrin (33%, maximum 59 μg/kg) is the priority insecticide of concern for the sediments studied. Five sites returned a TU greater than the possible effect threshold (i.e. log10TU > 1) as a result of bifenthrin contamination of their sediments. Most sediments did not exceed Australian sediment quality guideline levels for trace metals. However, more than half of the sites had threshold effect concentration quotients (TECQ) values >1 for Cu (58%), Pb (50%), Ni (67%) and Zn (63%), and 75% of sites had mean probable effect concentration quotients (PECQ) >0.2, suggesting that the collected sediments may have been having some impact on sediment-dwelling organisms.

QA/QC requirements for physical properties sampling and analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Innis, B.E.

1993-07-21

This report presents results of an assessment of the available information concerning US Environmental Protection Agency (EPA) quality assurance/quality control (QA/QC) requirements and guidance applicable to sampling, handling, and analyzing physical parameter samples at Comprehensive Environmental Restoration, Compensation, and Liability Act (CERCLA) investigation sites. Geotechnical testing laboratories measure the following physical properties of soil and sediment samples collected during CERCLA remedial investigations (RI) at the Hanford Site: moisture content, grain size by sieve, grain size by hydrometer, specific gravity, bulk density/porosity, saturated hydraulic conductivity, moisture retention, unsaturated hydraulic conductivity, and permeability of rocks by flowing air. Geotechnical testing laboratories alsomore » measure the following chemical parameters of soil and sediment samples collected during Hanford Site CERCLA RI: calcium carbonate and saturated column leach testing. Physical parameter data are used for (1) characterization of vadose and saturated zone geology and hydrogeology, (2) selection of monitoring well screen sizes, (3) to support modeling and analysis of the vadose and saturated zones, and (4) for engineering design. The objectives of this report are to determine the QA/QC levels accepted in the EPA Region 10 for the sampling, handling, and analysis of soil samples for physical parameters during CERCLA RI.« less

Puget Sound sediment-trap data: 1980-1985. Data report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paulson, A.J.; Baker, E.T.; Feely, R.A.

1991-12-01

In 1979, scientists at the Pacific Marine Environmental Laboratory began investigating the sources, transformation, transport and fate of pollutants in Puget Sound and its watershed under Sec. 202 of the Marine Protection, Research and Sanctuaries Act of 1971 (P.L. 92-532) which called in part for '...a comprehensive and continuing program of research with respect to the possible long range effects of pollution, overfishing, and man-induced changes of ocean ecosystems...' The effort was called the Long-Range Effects Research Program (L-RERP) after language in the Act and was later called the PMEL Marine Environmental Quality Program. The Long-Range Effect Research Program consistedmore » of (1) sampling dissolved and particulate constituents in the water column by bottle sampling, (2) sampling settling particles by sediment trap and (3) sampling sediments by grab, box, gravity and Kasten corers. In the Data Report, a variety of data from particles collected in 104 traps deployed on 34 moorings in open waters between 1980 and 1985 are presented. The text of the data report begins with the sampling and analytical methods with the accompanying quality control/quality assurance data. The text of the data sections are a summary of the available data and published literature in which the data is interpreted along with a catalogue of the data available in the Appendix (on microfiche located in the back pocket of the data report).« less

Flow-through Column Experiments and Modeling of Microbially Mediated Cr(VI) Reduction at Hanford 100H

NASA Astrophysics Data System (ADS)

Yang, L.; Molins, S.; Beller, H. R.; Brodie, E. L.; Steefel, C.; Nico, P. S.; Han, R.

2010-12-01

Microbially mediated Cr(VI) reduction at the Hanford 100H area was investigated by flow-through column experiments. Three separate experiments were conducted to promote microbial activities associated with denitrification, iron and sulfate reduction, respectively. Replicate columns packed with natural sediments from the site under anaerobic environment were injected with 5mM Lactate as the electron donor and 5 μM Cr(VI) in all experiments. Sulfate and nitrate solutions were added to act as the main electron acceptors in the respective experiments, while iron columns relied on the indigenous sediment iron (and manganese) oxides as electron acceptors. Column effluent solutions were analyzed by IC and ICP-MS to monitor the microbial consumption/conversion of lactate and the associated Cr(VI) reduction. Biogeochemical reactive transport modeling was performed to gain further insights into the reaction mechanisms and Cr(VI) bioreduction rates. All experimental columns showed a reduction of the injected Cr(VI). Columns under denitrifying conditions showed the least Cr(VI) reduction at early stages (<60 days) compared to columns run under other experimental conditions, but became more active over time, and ultimately showed the most consistent Cr(VI) reduction. A strong correlation between denitrification and Cr(VI) reduction processes was observed and was in agreement with the results obtained in batch experiments with a denitrifying bacterium isolated from the Hanford site. The accumulation of nitrite does not appear to have an adverse effect on Cr(VI) reduction rates. Reactive transport simulations indicated that biomass growth completely depleted influent ammonium, and called for an additional source of N to account for the measured reduction rates. Iron columns were the least active with undetectable consumption of the injected lactate, slowest cell growth, and the smallest change in Cr(VI) concentrations during the course of the experiment. In contrast, columns under sulfate-reducing/fermentative conditions exhibited the greatest Cr(VI) reduction capacity. Two sulfate columns evolved to complete lactate fermentation with acetate and propionate produced in the column effluent after 40 days of experiments. These fermenting columns showed a complete removal of injected Cr(VI), visible precipitation of sulfide minerals, and a significant increase in effluent Fe and Mn concentrations. Reactive transport simulations suggested that direct reduction of Cr(VI) by Fe(II) and Mn(II) released from the sediment could account for the observed Cr(VI) removal. The biogeochemical modeling was employed to test two hypotheses that could explain the release of Fe(II) and Mn(II) from the column sediments: 1) acetate produced by lactate fermentation provided the substrate for the growth of iron(III) and manganese(IV) oxide reducers, and 2) direct reduction of iron(III) and manganese(IV) oxides by hydrogen sulfide generated during sulfate reduction. Overall, experimental and modeling results suggested that Cr(VI) reduction in the sulfate-reducing columns occurred through a complex network of microbial reactions that included fermentation, sulfate reduction, and possibly the stimulated iron-reducing communities.

Stable lead isotopic analyses of historic and contemporary lead contamination of San Francisco Bay estuary

USGS Publications Warehouse

Ritson, P.I.; Bouse, R.M.; Flegal, A.R.; Luoma, S.N.

1999-01-01

Variations in stable lead isotopic composition (240Pb, 206Pb, 207Pb, 208Pb) in three sediment cores from the San Francisco Bay estuary document temporal changes in sources of lead during the past two centuries. Sediment, with lead from natural geologic sources, and relatively homogeneous lead isotopic compositions are overlain by sediments whose isotopic compositions indicate change in the sources of lead associated with anthropogenic modification of the estuary. The first perturbations of lead isotopic composition in the cores occur in the late 1800s concordant with the beginning of industrialization around the estuary. Large isotopic shifts, toward lower 206Pb/207Pb, occur after the turn of the century in both Richardson and San Pablo Bays. A similar relationship among lead isotopic compositions and lead concentrations in both Bays suggest contamination from the same source (a lead smelter). The uppermost sediments (post 1980) of all cores also have a relatively homogenous lead isotopic composition distinct from pre-anthropogenic and recent aerosol signatures. Lead isotopic compositions of leachates from fourteen surface sediments and five marsh samples from the estuary were also analyzed. These analyses suggest that the lead isotopic signature identified in the upper horizons of the cores is spatially homogeneous among recently deposited sediments throughout the estuary. Current aerosol lead isotopic compositions [Smith, D.R., Niemeyer, S., Flegal, A.R., 1992. Lead sources to California sea otters: industrial inputs circumvent natural lead biodepletion mechanisms. Environmental Research 57, 163-175] are distinct from the isotopic compositions of the surface sediments, suggesting that the major source of lead is cycling of historically contaminated sediments back through the water column. Both the upper core sediments and surface sediments apparently derive their lead predominantly from sources internal to the estuary. These results support the idea that geochemical cycling of lead between sediments and water accounts for persistently elevated lead concentrations in the water column despite 10-fold reduction of external source inputs to San Francisco Bay [Flegal, A.R., Rivera-Duarte, I., Ritson, P.I., Scelfo, G., Smith, G.J., Gordon, M., Sanudo-Wilhelmy, S.A., 1996. Metal contamination in San Francisco Waters: historic perturbations, contemporary concentrations, and future considerations in San Francisco Bay. In: Hollobaugh, J.T. (Ed.), The Ecosystem. AAAS, pp. 173-188].

Sediment studies at Bikini Atoll part 3. Inventories of some long-lived gamma-emitting radionuclides associated with lagoon surface sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Noshkin, V.E.

1997-12-01

Surface sediment samples were collected during 1979 from 87 locations in the lagoon at Bikini Atoll. The collections were made to better define the concentrations and distribution of long-lived radionuclides associated with the bottom material and to show what modifications occurred to the composition of the surface sediment from the nuclear testing program conducted by the United States at the Atoll between 1946 and 1958. This is the last of three reports on Bikini sediment studies. In this report, we discuss the concentrations and inventories of the residual long-lived gamma-emitting radionuclides in sediments from the lagoon. The gamma-emitting radionuclides detectedmore » most frequently in sediments collected in 1979, in addition to Americium-241 ({sup 241}Am) (discussed in the second report of this series), included Cesium-137 ({sup 137}Cs), Bismuth-207 ({sup 207}Bi), Europium-155 ({sup 155}Eu), and Cobalt-60 ({sup 60}Co). Other man-made, gamma-emitting radionuclides such as Europium-152,154 ({sup 152,154}Eu), Antimony-125 ({sup 125}Sb), and Rhodium-101,102m ({sup 101,102m}Rh) were occasionally measured above detection limits in sediments near test site locations. The mean inventories for {sup 137}Cs, {sup 207}Ei, {sup 155}Eu, and {sup 60}Co in the surface 4 cm of the lagoon sediment to be 1.7, 0.56, 7.76, and 0.74 TBq, respectively. By June 1997, radioactive decay would reduce these values to 1.1, 0.38, 0.62, and 0.07 TBq, respectively. Some additional loss results from a combination of different processes that continuously mobilize and return some amount of the radionuclides to the water column. The water and dissolved constituents are removed from the lagoon through channels and exchange with the surface waters of the north equatorial Pacific Ocean. Highest levels of these radionuclides are found in surface deposits lagoonward of the Bravo Crater. Lowest concentrations and inventories are associated with sediment lagoonward of the eastern reef. The quantities in the 0-4 cm surface layer are estimated to be less than 35% of the total inventory to depth in the sediment column.« less

Phorbin steryl esters in Black Sea sediment traps and sediments: A preliminary evaluation of their paleooceanographic potential

DOE Office of Scientific and Technical Information (OSTI.GOV)

King, L.L.; Repeta, D.J.

1994-10-01

The distributions of pyropheophorbide-a steryl esters in one-year deployments of sediment traps at two locations in the Black Sea are described. In nearly all trap samples, phorbin steryl esters (PSEs) contribute a significant portion of the total phorbin flux. The relative abundances of sterols esterified to pyropheophorbide-a varied throughout the year, and the authors suggest these changes result from the observed seasonal variation of phytoplankton species in the overlying water column. The distribution of free sterols in a one-year composite sediment trap sample closely approximates the distribution of sterols derived from the hydrolysis of sedimentary PSEs collected at an adjacentmore » site. From these results, they suggest that the distribution of sedimentary PSE sterols provides a record of sterol deposition to the sediment-water interface. Esterification of sterols to pyropheophorbide-a apparently prevents the preferential removal of 4-desmethyl sterols relative to 4-methyl sterols, and the reduction of stenols to stanols during degradation. Analysis of PSEs in a gravity core covering the last 8-10 Kyr shows that the abundance and distribution of PSEs change with downcore variations in sedimentology. Detailed analysis of PSEs in sediments may, therefore, provide a means to evaluate paleooceanographic changes in phytoplankton community structure and sterol early diagenesis. The synthesis, NMR, CI-MS, and visible spectroscopic properties of four abundance PSEs found in the Black Sea are also described.« less

Partitioning of mercury onto suspended sediments in estuaries.

PubMed

Le Roux, S M; Turner, A; Millward, G E; Ebdon, L; Appriou, P

2001-02-01

Radiochemical partitioning experiments using 203Hg have been undertaken with mixtures of river, seawater and sediment samples taken from three geochemically contrasting UK estuaries: the Plym, Beaulieu and Mersey. Species of dissolved Hg were determined using reversed-phase C18 chelating columns and particulate species were determined by sequential leaching with 1 M NH4OAc and 1 M HCl. Mercury had a high particle reactivity with partition coefficients, KDs, ranging from 10(4) to 5 x 10(5) ml g(-1), depending on salinity, the chemical composition of the end-member waters, and on the physico-chemical characteristics of the sediment. Dissolved organic matter present in the waters (humic substances and/or anthropogenic compounds) was found to be the main factor governing the forms of dissolved Hg and their reactivity. From the spiked 203Hg, up to 95% of the dissolved metal was retained on the C18 columns for the Mersey waters, whereas this fraction was < 60% in the Plym and Beaulieu waters. Quasi-irreversible adsorption of Hg onto particles from each estuary was observed over a time-scale of a few hours and < 20% of total particulate Hg was released by the sequential leach. In this paper, physico-chemical processes are proposed to explain the estuarine behaviour of Hg and the results are discussed in terms of Hg availability in estuarine systems.

Hydrothermal sediments are a source of water column Fe and Mn in the Bransfield Strait, Antarctica

NASA Astrophysics Data System (ADS)

Aquilina, Alfred; Homoky, William B.; Hawkes, Jeffrey A.; Lyons, Timothy W.; Mills, Rachel A.

2014-07-01

Short sediment cores were collected from ∼1100 m water depth at the top of Hook Ridge, a submarine volcanic edifice in the Central Basin of the Bransfield Strait, Antarctica, to assess Fe and Mn supply to the water column. Low-temperature hydrothermal fluids advect through these sediments and, in places, subsurface H2S is present at high enough concentrations to support abundant Sclerolinum sp., an infaunal tubeworm that hosts symbiotic thiotrophic bacteria. The water column is fully oxic, and oxygen penetration depths at all sites are 2-5 cmbsf. Pore water Fe and Mn content is high within the subsurface ferruginous zone (max. 565 μmol Fe L-1, >3-7 cmbsf)-14-18 times higher than values measured at a nearby, background site of equivalent water depth. Diffusion and advection of pore waters supply significant Fe and Mn to the surface sediment. Sequential extraction of the sediment demonstrates that there is a significant enrichment in a suite of reactive, authigenic Fe minerals in the upper 0-5 cm of sediment at one site characterised by weathered crusts at the seafloor. At a site with only minor authigenic mineral surface enrichment we infer that leakage of pore water Fe and Mn from the sediment leads to enriched total dissolvable Fe and Mn in bottom waters. An Eh sensor mounted on a towed package mapped a distinct Eh signature above this coring site which is dispersed over several km at the depth of Hook Ridge. We hypothesise that the main mechanism for Fe and Mn efflux from the sediment is breach of the surface oxic layer by the abundant Sclerolinum sp., along with episodic enhancements by physical mixing and resuspension of sediment in this dynamic volcanic environment. We propose that Hook Ridge sediments are an important source of Fe and Mn to the deep waters of the Central Basin in the Bransfield Strait, where concentrations are sustained by the benthic flux, and Fe is stabilised in the water column as either colloidal phases or ligand-bound dissolved species. Entrainment of this water mass into the Drake Passage and thereby the Antarctic Circumpolar Current could provide a significant metal source to this HNLC region of the Southern Ocean if mixing and upwelling occurs before removal of this metal pool to underlying sediments. Sediment-covered volcanic ridges are common within rifted margins and may play a previously overlooked role in the global Fe cycle.

DOWN-STREAM SPATIAL DISTRIBUTION OF ANTIBIOTIC RESISTANCE TRAITS ALONG METAL CONTAMINATED STREAM REACHES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tuckfield, C; J V Mcarthur

2007-04-16

Sediment bacteria samples were collected from three streams in South Carolina, two contaminated with multiple metals (Four Mile Creek and Castor Creek), one uncontaminated (Meyers Branch), and another metal contaminated stream (Lampert Creek) in northern Washington State. Growth plates inoculated with Four Mile Creek sample extracts show bacteria colony growth after incubation on plates containing either one of two aminoglycosides (kanamycin or streptomycin), tetracycline or chloramphenocol. This study analyzes the spatial pattern of antibiotic resistance in culturable sediment bacteria in all four streams that may be due to metal contamination. We summarize the two aminoglycoside resistance measures and the 10more » metals concentrations by Principal Components Analysis. Respectively, 63% and 58% of the variability was explained in the 1st principal component of each variable set. We used the respective multivariate summary metrics (i.e. 1st principal component scores) as input measures for exploring the spatial correlation between antibiotic resistance and metal concentration for each stream reach sampled. Results show a significant and negative correlation between metals scores versus aminoglycoside resistance scores and suggest that selection for metal tolerance among sediment bacteria may influence selection for antibiotic resistance differently than previously supposed.. In addition, we borrow a method from geostatistics (variography) wherein a spatial cross-correlation analysis shows that decreasing metal concentrations scores are associated with increasing aminoglycoside resistance scores as the separation distance between sediment samples decreases, but for contaminated streams only. Since these results were counter to our initial expectation and to other experimental evidence for water column bacteria, we suspect our field results are influenced by metal bioavailability in the sediments and by a contaminant promoted interaction or ''cocktail effect'' from complex combinations of pollution mediated selection agents.« less

Mercury Methylation at Mercury Mines In The Humboldt River Basin, Nevada, USA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gray, John E.; Crock, James G.; Lasorsa, Brenda K.

2002-12-01

Total Hg and methylmercury concentrations were measured in mine-waste calcines (retorted ore), sediment, and water samples collected in and around abandoned mercury mines in western Nevada to evaluate Hg methylation at the mines and in the Humboldt River basin. Mine-waste calcines contain total Hg concentrations as high as 14 000?g/g. Stream-sediment samples collected within 1 km of the mercury mines contain total Hg concentrations as high as 170?g/g, whereas stream sediments collected>5 km from the mines, and those collected from the Humboldt River and regional baseline sites, contain total Hg concentrations<0.5?g/g. Similarly, methylmercury concentrations in mine-waste calcines are locally asmore » high as 96 ng/g, but methylmercury contents in stream-sediments collected downstream from the mines and from the Humboldt River are lower, ranging from<0.05 to 0.95 ng/g. Stream-water samples collected below two mines studied contain total Hg concentrations ranging from 6 to 2000 ng/L, whereas total Hg in Humboldt River water was generally lower ranging from 2.1 to 9.0 ng/L. Methylmercury concentrations in the Humboldt River water were the lowest in this study (<0.02-0.27 ng/L). Although total Hg and methylmercury concentrations are locally high in mine-waste calcines, there is significant dilution of Hg and lower Hg methylation down gradient from the mines, especially in the sediments and water collected from the Humboldt River, which is> 8 km from any mercury mines. Our data indicate little transference of Hg and methylmercury from the sediment to the water column due to the lack of mine runoff in this desert climate.« less

Tracing geogenic and anthropogenic sources in urban dusts: Insights from lead isotopes

NASA Astrophysics Data System (ADS)

Del Rio-Salas, R.; Ruiz, J.; De la O-Villanueva, M.; Valencia-Moreno, M.; Moreno-Rodríguez, V.; Gómez-Alvarez, A.; Grijalva, T.; Mendivil, H.; Paz-Moreno, F.; Meza-Figueroa, D.

2012-12-01

Tracing the source of metals in the environment is critical to understanding their pollution level and fate. Geologic materials are an important source of airborne particulate matter, but the contribution of contaminated soil to concentrations of Pb in airborne dust is not yet widely documented. To examine the potential significance of this mechanism, surface soil samples were collected, as well as wind-transported dust trapped at 1 and 2 m height at seven different locations including residential, industrial, high-traffic and rural sites. Samples of dust deposited on roofs from 24 schools were also obtained and analyzed for Pb isotope ratios. Spatial distribution of Pb of airborne and sedimented dust suggests a process dominated by re-suspension/sedimentation, which was controlled by erosion, traffic and topography of the urban area. Anthropogenic lead input in the city grades outward the urban zone toward geogenic values. Our results shows that Pb-isotopic signatures of leaded gasoline are imprinted in dust sedimented on roofs. Considering that leaded-gasoline has not been in use in Mexico since two decades ago, this signature shows not only a Pb-legacy in soil, but also a re-suspension process affecting air column below 3 m in height. The combination of the 207Pb/206Pb data of the surrounding rocks and urban dust, reveal three well-defined zones with remarkable anthropogenic influence, which correspond to the oldest urban sectors. This work highlights the importance of spatial characterization of metals in particles suspended below a height of 3 m of the airborne column, a fact that should be considered to identify exposure paths to humans and the potential risks. Lead isotope signatures allowed the identification of geogenic and anthropogenic emission sources for dust, a matter that deserves consideration in the efforts to control airborne metal emissions.

An Investigation of the Marine Geochemistry of Gold

DTIC Science & Technology

1989-04-01

platinum group elements both in the water column and in the sediments. This study represents an initial effort towards characterizing the behavior of Au inl...mechanisms of Au remain, the 198Au studies do raise issues pertinent to the preservation of natural water samples: 1) Indiscriminate acid additions can...chamber was chilled to 15’C throughout this work. Studies have clearly shown that lowering the temperature of the spray chamber to 2’C reduces the water

Transport behavior of groundwater protozoa and protozoan-sized microspheres in sandy aquifer sediments

USGS Publications Warehouse

Harvey, R.W.; Kinner, N.E.; Bunn, A.; MacDonald, D.; Metge, D.

1995-01-01

Transport behaviors of unidentified flagellated protozoa (flagellates) and flagellate-sized carboxylated microspheres in sandy, organically contaminated aquifer sediments were investigated in a small-scale (1 to 4-m travel distance) natural-gradient tracer test on Cape Cod and in flow-through columns packed with sieved (0.5-to 1.0-mm grain size) aquifer sediments. The minute (average in situ cell size, 2 to 3 ??m) flagellates, which are relatively abundant in the Cape Cod aquifer, were isolated from core samples, grown in a grass extract medium, labeled with hydroethidine (a vital eukaryotic stain), and coinjected into aquifer sediments along with bromide, a conservative tracer. The 2-??m flagellates appeared to be near the optimal size for transport, judging from flowthrough column experiments involving a polydispersed (0.7 to 6.2 ??m in diameter) suspension of carboxylated microspheres. However, immobilization within the aquifer sediments accounted for a log unit reduction over the first meter of travel compared with a log unit reduction over the first 10 m of travel for indigenous, free-living groundwater bacteria in earlier tests. High rates of flagellate immobilization in the presence of aquifer sediments also was observed in the laboratory. However, immobilization rates for the laboratory-grown flagellates (initially 4 to 5 ??m) injected into the aquifer were not constant and decreased noticeably with increasing time and distance of travel. The decrease in propensity for grain surfaces was accompanied by a decrease in cell size, as the flagellates presumably readapted to aquifer conditions. Retardation and apparent dispersion were generally at least twofold greater than those observed earlier for indigenous groundwater bacteria but were much closer to those observed for highly surface active carboxylated latex microspheres. Field and laboratory results suggest that 2- ??m carboxylated microspheres may be useful as analogs in investigating several abiotic aspects of flagellate transport behavior in groundwater.

Accumulation of sedimentary photosynthetic pigments characterized by pyropheophorbide a and steryl chlorin esters (SCEs) in a shallow eutrophic coastal lake (Lake Hamana, Japan)

NASA Astrophysics Data System (ADS)

Itoh, Nobuyasu; Tani, Yukinori; Soma, Yuko; Soma, Mitsuyuki

2007-01-01

We investigated the factors controlling the composition of sedimentary photosynthetic pigments in Lake Hamana (Japan), a shallow (12 m), brackish, holomictic lake, by analyzing photosynthetic pigments and the sterol composition of steryl esters of pyropheophorbide a (steryl chlorin esters, SCEs) in the water column and surface sediments. The mean annual composition of carotenoids in the water was quite different from that in the surface sediments. We evaluated the relative accumulation efficiency of individual pigments in the sediments by comparing ratios of individual pigment concentrations relative to total chlorophyll a (TChl- a) in sediment to those in the water column. The relative accumulation efficiencies decreased in the following order: lutein > diatoxanthin > β,β-carotene > zeaxanthin > β,ɛ-carotene > alloxanthin ≫ fucoxanthin. The ratio of total pyro-derivatives of chlorophyll a, formed through the grazing of algae by zooplankton, to TChl- a in the surface sediments was much higher (0.24-0.33) than that in the water column, which was less than 0.03 even in the deepest water (10 m). The summed concentration of pyropheophytin a and SCEs (TPyphe- a) showed positive and significant relationships ( r2 > 0.56, n = 7) with residual carotenoids in sediments. These results suggest that incorporation of algal pigments in fecal pellets through grazing by zooplankton enhances pigment preservation during early diagenesis at the sediment surface. Moreover, sedimentary carotenoid compositions were consistent with the sterol compositions of sedimentary SCE fractions. Selective grazing by zooplankton was thus a primary factor determining the composition of sedimentary carotenoids in this lake.

Mercury, methylmercury, and other constituents in sediment and water from seasonal and permanent wetlands in the Cache Creek settling basin and Yolo Bypass, Yolo County, California, 2005-06

USGS Publications Warehouse

Marvin-DiPasquale, Mark; Alpers, Charles N.; Fleck, Jacob A.

2009-01-01

This report presents surface water and surface (top 0-2 cm) sediment geochemical data collected during 2005-2006, as part of a larger study of mercury (Hg) dynamics in seasonal and permanently flooded wetland habitats within the lower Sacramento River basin, Yolo County, California. The study was conducted in two phases. Phase I represented reconnaissance sampling and included three locations within the Cache Creek drainage basin; two within the Cache Creek Nature Preserve (CCNP) and one in the Cache Creek Settling Basin (CCSB) within the creek's main channel near the southeast outlet to the Yolo Bypass. Two additional downstream sites within the Yolo Bypass Wildlife Area (YBWA) were also sampled during Phase I, including one permanently flooded wetland and one seasonally flooded wetland, which had began being flooded only 1–2 days before Phase I sampling.Results from Phase I include: (a) a negative correlation between total mercury (THg) and the percentage of methylmercury (MeHg) in unfiltered surface water; (b) a positive correlation between sediment THg concentration and sediment organic content; (c) surface water and sediment THg concentrations were highest at the CCSB site; (d) sediment inorganic reactive mercury (Hg(II)R) concentration was positively related to sediment oxidation-reduction potential and negatively related to sediment acid volatile sulfur (AVS) concentration; (e) sediment Hg(II)R concentrations were highest at the two YBWA sites; (f) unfiltered surface water MeHg concentration was highest at the seasonal wetland YBWA site, and sediment MeHg was highest at the permanently flooded YBWA site; (g) a 1,000-fold increase in sediment pore water sulfate concentration was observed in the downstream transect from the CCNP to the YBWA; (h) low sediment pore water sulfide concentrations (<1 µmol/L) across all sites; and (i) iron (Fe) speciation data suggest a higher potential for microbial Fe(III)-reduction in the YBWA compared to the CCSB.Phase II sampling did not include the original three Cache Creek sites, but instead focused on the original two sites within the YBWA and a similarly paired set of seasonally and permanently flooded wetland sites within the CCSB. Sediment sampling at the YBWA and CCSB occurred approximately 28 days and 52 days, respectively, after the initial flooding of the respective seasonal wetlands, and again towards the end of the seasonal flooding period (end of May 2006). Results from Phase II sampling include: (a) sediment MeHg concentration and the percentage of THg as MeHg (%MeHg) in unfiltered surface waters were generally higher in the YBWA compared to the CCSB; (b) suspended sediment concentration (SCC) in surface water was positively correlated with both THg and MeHg in unfiltered water across all sites, although the relationship between SCC and MeHg differed for the two regions, suggesting local MeHg sources; (c) MeHg concentration in unfiltered surface water was positively correlated to sediment MeHg concentrations across all sites, supporting the suggestion of unique local (sediment) sources of MeHg to the water column; (d) THg concentration in filtered water was positively correlated with both total Fe and dissolved organic carbon (DOC), offering additional support for the role of these constituents in the partitioning of THg between particulate and dissolved phases; (e) flooding of the YBWA seasonal wetland resulted in a rapid and significant (5-fold) rise in sediment MeHg concentration within 3–4 weeks following inundation; and (f) temporal changes in sediment S and Fe speciation suggest that rates of both microbial sulfate reduction and Fe(III)-reduction were significantly higher at YBWA, compared to CCSB, during the period between flooding and drying.The geochemical data presented in this report indicate that (a) strong spatial and temporal differences in Hg speciation and transformations can occur within the range of wetland habitats found in the lower Sacramento River basin; (b) flooding of seasonal wetlands can be accompanied by a rapid increase in benthic MeHg production and the release of previously formed MeHg (generated during or since the previous flooding season) to the overlying water column; (c) S and Fe chemistry, and associated microbial reduction pathways, play an important role in mediating the speciation and transformation of Hg in these wetland habitats; (d) hydroperiod is a primary forcing function in mediating MeHg production among various wetland types; and (e) MeHg production appears to be more active in the YBWA compared to the CCSB.

Modeling Benthic Sediment Processes to Predict Water Quality and Ecology in Narragansett Bay

EPA Science Inventory

The benthic sediment acts as a huge reservoir of particulate and dissolved material (within interstitial water) which can contribute to loading of contaminants and nutrients to the water column. A benthic sediment model is presented in this report to predict spatial and temporal ...

Sediment and Lower Water Column Oxygen Consumption in the Seasonally-hypoxic Region of the Louisiana Continental Shelf

EPA Science Inventory

We report sediment and bottom water respiration rates from 10 cruises from 2003-2007 on the Louisiana Continental Shelf (LSC) where summer hypoxia regularly occurs. Cruises were conducted during spring (5 cruises), summer (3 cruises) and fall (2 cruises). Cruise average sediment ...

Life under ice: Investigating microbial-related biogeochemical cycles in the seasonally-covered Great Lake Onego, Russia

NASA Astrophysics Data System (ADS)

Thomas, Camille; Ariztegui, Daniel; Victor, Frossard; Emilie, Lyautey; Marie-Elodie, Perga; Life Under Ice Scientific Team

2016-04-01

The Great European lakes Ladoga and Onego are important resources for Russia in terms of drinking water, energy, fishing and leisure. Because their northern location (North of Saint Petersburgh), these lakes are usually ice-covered during winter. Due to logistical reasons, their study has thus been limited to the ice-free periods, and very few data are available for the winter season. As a matter of fact, comprehension of large lakes behaviour in winter is very limited as compared to the knowledge available from small subpolar lakes or perennially ice-covered polar lakes. To tackle this issue, an international consortium of scientists has gathered around the « life under ice » project to investigate physical, chemical and biogeochemical changes during winter in Lake Onego. Our team has mainly focused on the characterization and quantification of biological processes, from the water column to the sediment, with a special focus on methane cycling and trophic interactions. A first « on-ice » campaign in March 2015 allowed the sampling of a 120 cm sedimentary core and the collection of water samples at multiple depths. The data resulting from this expedition will be correlated to physical and chemical parameters collected simultaneously. A rapid biological activity test was applied immediately after coring in order to test for microbial activity in the sediments. In situ adenosine-5'-triphosphate (ATP) measurements were carried out in the core and taken as an indication of living organisms within the sediments. The presence of ATP is a marker molecule for metabolically active cells, since it is not known to form abiotically. Deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) were extracted from these samples, and quantified. Quantitative polymerase chain reactions (PCR) were performed on archaeal and bacterial 16S rRNA genes used to reconstruct phylogenies, as well as on their transcripts. Moreover, functional genes involved in the methane and nitrogen cycles were also quantified in both sediment and water column. Preliminary results show that in the sediment, methanogenesis occurs below 7 cm. Above this redox boundary, methanotrophs are abundant but there activity remains enigmatic (10000 times less transcript than gene copies). Based on 16S rRNA transcripts, Bacteria and Archaea seem to have their maximum activity within the first 7 cm. These data are validated by ATP measurements. The principal peaks of activity actually lie at the water sediment interface, and at the redox boundary (7cm). High-throughput sequencing of 16S rRNA genes (both from DNA and RNA) are currently being performed to gain further understanding on the main actors of these microbial processes in the sediment. Diversity analysis are also being prepared and will allow to characterize the relationship between planktonic and benthic communities in the ice-covered lake.

Characteristics of suspended and streambed sediment within constructed chutes and the main channel at Upper Hamburg and Glovers Point Bends, Missouri River, Nebraska, 2008

USGS Publications Warehouse

Woodward, Brenda K.; Rus, David L.

2011-01-01

The U.S. Army Corps of Engineers, Omaha District, as part of the Missouri River Bank Stabilization and Navigation Mitigation Project, has constructed 17 off-channel chutes along the channelized Missouri River, downstream from Sioux City, Iowa, to increase habitat diversity. To better understand characteristics of suspended and streambed sediment within these constructed chutes, the U.S. Geological Survey investigated specific aspects of chute design and function in relation to sediment characteristics including: (1) effects of inlet structures; (2) changes occurring between the inlet and the outlet of a chute; (3) effects of chutes on sediment characteristics in the main channel; and (4) differences in chute dynamics between sampled chutes. Two chutes differing in design, location, and dynamics were studied, Upper Hamburg Bend near Nebraska City, Nebr., and Glovers Point Bend near Winnebago, Nebr. Each site was characterized using five or more sampling transects (two in the chute and three to four in the main channel) designed to bracket sediment exchanges between chutes and the main channel. A sixth transect was included at the Upper Hamburg Bend study site to account for the effects of a nontarget chute having its inlet midway between the inlet and outlet of the primary chute. Representative samples of suspended and streambed sediment were collected at each transect, along with measurements of turbidity and streamflow, between June and November 2008. Four sets of samples were collected at the Glovers Point Bend study site and five sample sets were collected from the Upper Hamburg Bend study site. Results from paired t-tests and standard t-tests indicated that the inlet structure design, passing inflow only from the top of the main-channel water column, reduced the supply of coarse-grained suspended sediment entering the chutes. Statistical comparisons did not indicate differences between the inlet and outlet of either chute; however, anecdotal evidence of recent bank erosion and in-channel deposition was observed in both chutes during the study period. Chutes had little effect on Missouri River main-channel sediment characteristics, which could be explained by the much greater streamflow of the main channel. Between-chute comparisons showed no significant differences in the suspended-sediment characteristics; however, the Upper Hamburg Bend chute had a coarser streambed, wider channel, and much greater streamflow than did the Glovers Point Bend chute.

Biodegradation of 17β-estradiol, estrone and testosterone in stream sediments

USGS Publications Warehouse

Bradley, Paul M.; Barber, Larry B.; Chapelle, Francis H.; Gray, James L.; Kolpin, Dana W.; McMahon, Peter B.

2009-01-01

Biodegradation of 17β-estradiol (E2), estrone (E1), and testosterone (T) was investigated in three wastewater treatment plant (WWTP) affected streams in the United States. Relative differences in the mineralization of [4-14C] substrates were assessed in oxic microcosms containing saturated sediment or water-only from locations upstream and downstream of the WWTP outfall in each system. Upstream sediment demonstrated significant mineralization of the “A” ring of E2, E1, and T, with biodegradation of T consistently greater than that of E2 and no systematic difference in E2 and E1 biodegradation. “A” ring mineralization also was observed in downstream sediment, with E1 and T mineralization being substantially depressed relative to upstream samples. In marked contrast, E2 mineralization in sediment immediately downstream from the WWTP outfalls was more than double that in upstream sediment. E2 mineralization was observed in water, albeit at insufficient rate to prevent substantial downstream transport. The results indicate that, in combination with sediment sorption processes which effectively scavenge hydrophobic contaminants from the water column and immobilize them in the vicinity of the WWTP outfall, aerobic biodegradation of reproductive hormones can be an environmentally important mechanism for nonconservative (destructive) attenuation of hormonal endocrine disruptors in effluent-affected streams.

Pigments in sediments beneath recently collapsed ice shelves: The case of Larsen A and B shelves, Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Sañé, E.; Isla, E.; Grémare, A.; Gutt, J.; Vétion, G.; DeMaster, D. J.

2011-01-01

In March 2002, 3200 km 2 of the Larsen B ice shelf collapsed off the Eastern Antarctic Peninsula (EAP). In the austral summer of 2006, sea floor sediment was recovered beneath the extinct Larsen B ice shelf and in a region off the Northern Antarctic Peninsula (NAP), which has been free of ice shelves for more than 1000 yr. To assess changes in the chemical composition of the sediment after ice shelf collapses, chlorophylls and pheophytins were measured in sediment cores at six stations. This is the first time that chlorophyll pigments have been analysed in sediment samples from regions under recently collapsed ice shelves. Five years after the ice shelf collapse, Chla and Chlc concentrations were similar in the interfacial sediment (upper 1 cm) of NAP and EAP regions. However, in EAP Chla and Chlc concentrations decreased more rapidly with depth in the sediment column and were negligible below 2 cm depth. The high Chla to Pheoa ratios indicated that sedimentary pigments found in EAP had undergone limited degradation suggesting that they were locally produced rather than laterally advected. Complementary information from excess 210Pb activity and diatom valve distributions provided further evidence that the pigment fluxes to the seabed in EAP took place only after the ice shelf collapse.

Modeling the transport of engineered nanoparticles in saturated porous media - an experimental setup

NASA Astrophysics Data System (ADS)

Braun, A.; Neukum, C.; Azzam, R.

2011-12-01

The accelerating production and application of engineered nanoparticles is causing concerns regarding their release and fate in the environment. For assessing the risk that is posed to drinking water resources it is important to understand the transport and retention mechanisms of engineered nanoparticles in soil and groundwater. In this study an experimental setup for analyzing the mobility of silver and titanium dioxide nanoparticles in saturated porous media is presented. Batch and column experiments with glass beads and two different soils as matrices are carried out under varied conditions to study the impact of electrolyte concentration and pore water velocities. The analysis of nanoparticles implies several challenges, such as the detection and characterization and the preparation of a well dispersed sample with defined properties, as nanoparticles tend to form agglomerates when suspended in an aqueous medium. The analytical part of the experiments is mainly undertaken with Flow Field-Flow Fractionation (FlFFF). This chromatography like technique separates a particulate sample according to size. It is coupled to a UV/Vis and a light scattering detector for analyzing concentration and size distribution of the sample. The advantage of this technique is the ability to analyze also complex environmental samples, such as the effluent of column experiments including soil components, and the gentle sample treatment. For optimization of the sample preparation and for getting a first idea of the aggregation behavior in soil solutions, in sedimentation experiments the effect of ionic strength, sample concentration and addition of a surfactant on particle or aggregate size and temporal dispersion stability was investigated. In general the samples are more stable the lower the concentration of particles is. For TiO2 nanoparticles, the addition of a surfactant yielded the most stable samples with smallest aggregate sizes. Furthermore the suspension stability is increasing with electrolyte concentration. Depending on the dispersing medium the results show that TiO2 nanoparticles tend to form aggregates between 100-200 nm in diameter while the primary particle size is given as 21 nm by the manufacturer. Aggregate sizes are increasing with time. The particle size distribution of the silver nanoparticle samples is quite uniform in each medium. The fresh samples show aggregate sizes between 40 and 45 nm while the primary particle size is 15 nm according to the manufacturer. Aggregate size is only slightly increasing with time during the sedimentation experiments. These results are used as a reference when analyzing the effluent of column experiments.

LNAPL Removal from Unsaturated Porous Media using Surfactant Infiltration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhong, Lirong; Oostrom, Martinus

A series of unsaturated column experiments was performed to evaluate light non-aqueous phase liquid (LNAPL) fate and removal during surfactant solution infiltration. Surfactant-LNAPL phase behavior tests were conducted to optimize the remedial solutions. Packed sand and site sediment columns were first processed to establish representative LNAPL smear zone under unsaturated conditions. Infiltration of low-concentration surfactant was then applied in a stepwise flush mode, with 0.3 column pore volume (PV) of solution in each flush. The influence of infiltrated surfactant solution volume and pH on LNAPL removal was assessed. A LNAPL bank was observed at the very front of the firstmore » surfactant infiltration in each column, indicating that a very low surfactant concentration is needed to reduce the LNAPL-water interfacial tension sufficiently enough to mobilize trapped LNAPL under unsaturated conditions. More LNAPL was recovered as additional steps of surfactant infiltration were applied. Up to 99% LNAPL was removed after six infiltration steps, with less than 2.0 PV of total surfactant solution application, suggesting surfactant infiltration may be an effective method for vadose zone LNAPL remediation. The influence of pH tested in this study (3.99~10.85) was insignificant because the buffering capacity of the sediment kept the pH in the column higher than the zero point charge, pHzpc, of the sediment and therefore the difference between surfactant sorption was negligible.« less

Modelling Kepone in the striped bass food chain of the James River estuary

NASA Astrophysics Data System (ADS)

Connolly, John P.; Tonelli, Rosella

1985-03-01

A mathematical model that computes the accumulation of Kepone in the striped bass food chain of the James River estuary was developed. The purpose of the model was to help understand the relationship of Kepone levels in important fish species to sediment and water column Kepone concentrations and then to address the question of why these levels still exceed Food and Drug Administration limits eight years after discharge ceased. The model considers exposure through diet and respiration at rates based on species bioenergetics. It was successfully calibrated to the Kepone concentrations observed in the period 1976 through 1982 in striped bass, white perch, and Atlantic croaker. The model indicates that for the upper levels of the food chain, diet is the major route of contamination, accounting for 87-88% of the observed concentration in croaker and white perch and 91% of the observed concentration in striped bass. The two Kepone sources; sediment and water column, contribute approximately equally to the croaker and white perch. The water column is more significant for striped bass, being the original source for approximately 60% of the observed body burdens. It was estimated that a criterion requiring Kepone concentrations in fish to be at or below 0·3 μg g -1 would require dissolved water column and sediment Kepone concentrations to be reduced to somewhere between 3 and 9 ng l -1 and 13-39 ng g -1, respectively, depending on the species. Striped bass require the greatest reductions in dissolved water column and sediment Kepone concentrations to somewhere between 3 and 5 ng l -1 and 13 and 24 ng g -1, respectively.

Microbial Remobilisation on Riverbed Sediment Disturbance in Experimental Flumes and a Human-Impacted River: Implication for Water Resource Management and Public Health in Developing Sub-Saharan African Countries

PubMed Central

Abia, Akebe Luther King; James, Chris; Ubomba-Jaswa, Eunice; Benteke Momba, Maggy Ndombo

2017-01-01

Resuspension of sediment-borne microorganisms (including pathogens) into the water column could increase the health risk for those using river water for different purposes. In the present work, we (1) investigated the effect of sediment disturbance on microbial resuspension from riverbed sediments in laboratory flow-chambers and in the Apies River, Gauteng, South Africa; and (2) estimated flow conditions for sediment-borne microorganism entrainment/resuspension in the river. For mechanical disturbance, the top 2 cm of the sediment in flow-chambers was manually stirred. Simulating sudden discharge into the river, water (3 L) was poured within 30 s into the chambers at a 45° angle to the chamber width. In the field, sediment was disturbed by raking the riverbed and by cows crossing in the river. Water samples before and after sediment disturbance were analysed for Escherichia coli. Sediment disturbance caused an increase in water E. coli counts by up to 7.9–35.8 times original values. Using Shields criterion, river-flow of 0.15–0.69 m3/s could cause bed particle entrainment; while ~1.57–7.23 m3/s would cause resuspension. Thus, sediment disturbance in the Apies River would resuspend E. coli (and pathogens), with possible negative health implications for communities using such water. Therefore, monitoring surface water bodies should include microbial sediment quality. PMID:28295001

Microbial Remobilisation on Riverbed Sediment Disturbance in Experimental Flumes and a Human-Impacted River: Implication for Water Resource Management and Public Health in Developing Sub-Saharan African Countries.

PubMed

Abia, Akebe Luther King; James, Chris; Ubomba-Jaswa, Eunice; Benteke Momba, Maggy Ndombo

2017-03-15

Resuspension of sediment-borne microorganisms (including pathogens) into the water column could increase the health risk for those using river water for different purposes. In the present work, we (1) investigated the effect of sediment disturbance on microbial resuspension from riverbed sediments in laboratory flow-chambers and in the Apies River, Gauteng, South Africa; and (2) estimated flow conditions for sediment-borne microorganism entrainment/resuspension in the river. For mechanical disturbance, the top 2 cm of the sediment in flow-chambers was manually stirred. Simulating sudden discharge into the river, water (3 L) was poured within 30 s into the chambers at a 45° angle to the chamber width. In the field, sediment was disturbed by raking the riverbed and by cows crossing in the river. Water samples before and after sediment disturbance were analysed for Escherichia coli. Sediment disturbance caused an increase in water E. coli counts by up to 7.9-35.8 times original values. Using Shields criterion, river-flow of 0.15-0.69 m³/s could cause bed particle entrainment; while ~1.57-7.23 m³/s would cause resuspension. Thus, sediment disturbance in the Apies River would resuspend E. coli (and pathogens), with possible negative health implications for communities using such water. Therefore, monitoring surface water bodies should include microbial sediment quality.

Characterization of Long-term Stability of Sodium Dithionite for Evaluation of its Potential Utility for Cr(VI) Remediation at Los Alamos National Laboratory

NASA Astrophysics Data System (ADS)

Telfeyan, K.; Migdissov, A. A.; Reimus, P. W.

2017-12-01

Sodium dithionite (Na2S2O4) has proven to be an effective remediation agent in aquifers contaminated with Cr(VI). S2O42- rapidly reduces the Fe(III) in aquifer sediments to Fe(II), which then reduces aqueous Cr(VI) to insoluble Cr(III). Previous work demonstrated that the reaction products from this treatment have no long-lasting undesirable effects. However, current literature regarding the stability of dithionite in aqueous solution and its decomposition products, which are important for developing a practical treatment approach, is sparse and inconsistent. Furthermore, S2O42- treatment effectiveness depends on site-specific geochemical and hydrological conditions, so experiments using site-specific materials are necessary to develop an optimal treatment strategy. In this study, we conducted (1) batch aqueous-phase-only experiments aimed at elucidating dithionite lifetimes and decomposition products as a function of dithionite concentration and pH, (2) batch experiments at the most practical pH for a field deployment, with use of four different representations of site aquifer sediments to evaluate dithionite reaction rates in the presence of the sediments and to determine the reduction capacity of the treated sediments, and (3) column experiments to represent a field-scale deployment of dithionite and determine the Cr(VI) reduction capacity of the reduced sediments. The aqueous-phase-only batch experiments verified the presence of S2O42- in aqueous anoxic solution beyond 100 days at alkaline pH. Each sampling interval also recorded the concentration of decomposition products, which enabled the derivation of a possible hydrolysis/decomposition reaction. In the batch experiments with sediments, dithionite reacted more rapidly than in blank solutions, but measurable concentrations remained for over a month. Cr was then added to the reactors to determine the efficacy of treatment. Depending on the sediment type and concentration of dithionite, the treated sediments were able to remove between 100 and 1000 µg Cr per gram of sediment. Column experiments then determined that the dithionite treatment of aquifer sediments could treat over 30 pore volumes of contaminated water (900 ppb Cr) prior to any breakthrough of Cr, suggesting that S2O42- should be an effective treatment agent at this site.

Modeling seasonal variability of carbonate system parameters at the sediment -water interface in the Baltic Sea (Gdansk Deep)

NASA Astrophysics Data System (ADS)

Protsenko, Elizaveta; Yakubov, Shamil; Lessin, Gennady; Yakushev, Evgeniy; Sokołowski, Adam

2017-04-01

A one-dimensional fully-coupled benthic pelagic biogeochemical model BROM (Bottom RedOx Model) was used for simulations of seasonal variability of biogeochemical parameters in the upper sediment, Bottom Boundary Layer and the water column in the Gdansk Deep of the Baltic Sea. This model represents key biogeochemical processes of transformation of C, N, P, Si, O, S, Mn, Fe and the processes of vertical transport in the water column and the sediments. The hydrophysical block of BROM was forced by the output calculated with model GETM (General Estuarine Transport Model). In this study we focused on parameters of carbonate system at Baltic Sea, and mainly on their distributions near the sea-water interface. For validating of BROM we used field data (concentrations of main nutrients at water column and porewater of upper sediment) from the Gulf of Gdansk. The model allowed us to simulate the baseline ranges of seasonal variability of pH, Alkalinity, TIC and calcite/aragonite saturation as well as vertical fluxes of carbon in a region potentially selected for the CCS storage. This work was supported by project EEA CO2MARINE and STEMM-CCS.

Transfer of gold nanoparticles from the water column to the estuarine food web

NASA Astrophysics Data System (ADS)

Ferry, John L.; Craig, Preston; Hexel, Cole; Sisco, Patrick; Frey, Rebecca; Pennington, Paul L.; Fulton, Michael H.; Scott, I. Geoff; Decho, Alan W.; Kashiwada, Shosaku; Murphy, Catherine J.; Shaw, Timothy J.

2009-07-01

Within the next five years the manufacture of large quantities of nanomaterials may lead to unintended contamination of terrestrial and aquatic ecosystems. The unique physical, chemical and electronic properties of nanomaterials allow new modes of interaction with environmental systems that can have unexpected impacts. Here, we show that gold nanorods can readily pass from the water column to the marine food web in three laboratory-constructed estuarine mesocosms containing sea water, sediment, sea grass, microbes, biofilms, snails, clams, shrimp and fish. A single dose of gold nanorods (65 nm length × 15 nm diameter) was added to each mesocosm and their distribution in the aqueous and sediment phases monitored over 12 days. Nanorods partitioned between biofilms, sediments, plants, animals and sea water with a recovery of 84.4%. Clams and biofilms accumulated the most nanoparticles on a per mass basis, suggesting that gold nanorods can readily pass from the water column to the marine food web.

Reactive iron and manganese in estuarine sediments of the Baltic Sea: Impacts of flocculation and redox shuttling

NASA Astrophysics Data System (ADS)

Jilbert, Tom; Tiihonen, Rosa; Myllykangas, Jukka-Pekka; Asmala, Eero; Hietanen, Susanna

2016-04-01

Iron (Fe) and manganese (Mn) play important roles in sedimentary carbon cycling in both freshwater and marine systems. Dissimilatory reduction of Fe and Mn oxides is known to be a major pathway of suboxic organic matter remineralization in surface sediments, while recent studies have shown that Fe and Mn oxides may be involved in the anaerobic oxidation of methane deeper in the sediment column (e.g., Egger et al., 2015). Estuaries are transitional environments, characterized by gradients of salinity and redox conditions which impact on the mobility of Fe and Mn. In turn, the distribution of Fe and Mn in estuarine sediments, and the role of the two metals in carbon cycling, is expected to be spatially heterogeneous. However, few studies have attempted to describe the sedimentary distribution of Fe and Mn in the context of processes occurring in the estuarine water column. In particular, salinity-driven flocculation and redox shuttling are two key processes whose relative impacts on sedimentary Fe and Mn have not been clearly demonstrated. In this study we investigated the coupled water column and sedimentary cycling of Fe and Mn along a 60km non-tidal estuarine transect in the Gulf of Finland, Baltic Sea. We show that riverine Fe entering the estuary as colloidal oxides associated with dissolved organic matter (DOM) is quickly flocculated and sedimented within 5 km of the river mouth, despite the shallow lateral salinity gradient. Sediments within this range are enriched in Fe (up to twice the regional average), principally in the form of crystalline Fe oxides as determined by sequential extractions. The high crystallinity implies relative maturity of the oxide mineralogy, likely due to sustained oxic conditions and long residence time in the river catchment. Despite the reducing conditions below the sediment-water interface, Fe is largely retained in the sediments close to the river mouth. In contrast, sedimentary Mn concentrations are highest in a deep silled basin more than 10km downstream. Throughout the estuary, Mn oxides are reductively dissolved shallower in the sediment column than Fe oxides, resulting in strong effluxes of dissolved Mn from the sediments. Subsequent oxidation of bottom water dissolved Mn to particulate oxides and lateral transport ("redox shuttling") account for the sedimentary Mn enrichments in the deep silled basin. Porewater data suggest that the heterogeneity of Fe and Mn availability in the estuarine sediments may influence the relative importance of the two metals for anaerobic oxidation of methane. Egger, M. et al., Environmental Science and Technology 49(1), 277-283, 2015.

Sedimentary Phosphorus Dynamics in a Coastal Louisiana Prograding Delta

NASA Astrophysics Data System (ADS)

Upreti, K.; Maiti, K.; Rivera-Monroy, V. H.

2016-02-01

A number of studies have quantified phosphorus (P) concentration and sediment-water column exchange undergoing changes in redox condition in the Louisiana delta plain. However, there is not information on the potential role of bacteria in P transformations in Louisiana coastal wetlands. The main objective of this work was to evaluate sedimentary P dynamics by identifying dominant forms of P in sediments and determine the magnitude of P mobilization during bacterially mediated redox reactions. Sediment samples were collected from three sites (ridge, interior, and channel) characterized by variation in the vegetation and elevation in the currently prograding Wax Lake Delta. Sediments were incubated with and without the bacterium Shewanella putrefaciencs CN32 (Sp-CN32), which is an iron reducing bacteria that consumes dissolved oxygen and leads to reduction of Fe III to Fe II thereby releasing PO43- bound to Fe III oxide. Our results revealed that P release in sediments spiked with Sp-CN32 was significantly higher in all sediments when compared to sediments in natural condition. P release from sediment spiked with Sp-CN32 significantly increased from 0.064 to 1.460 umoles/g in the sediment sampled at high elevation (ridge) and from 0.079 to 2.407 moles/g in the medium elevation area (interior) of the island. This increase in P release was significantly correlated with an increase in Fe (II) concentrations. The extent of P release was proportionally higher than the Fe (II) measured in all sediments. The P/Fe ratio steadily increased for the first 24 h followed by a rapid decrease. This temporal trend suggests a lag in Fe (III) reduction and an initial bacterial uptake and release of loosely sorbed NaHCO3-P pool when Sp-CN32 respired on O2 as the terminal electron acceptor. This study contributes to our understanding of the release mechanism of P during bacterial mediated redox reaction in wetland soils undergoing pulsing sediment deposition.

Sediment Resuspension and Transport During Bora in the Western Adriatic Coastal Current

NASA Astrophysics Data System (ADS)

Mullenbach, B. L.; Geyer, W. R.; Sherwood, C. R.

2004-12-01

The Western Adriatic Coastal Current (WACC) is an important agent for along-shelf transport of sediment and fresh water in the western Adriatic Sea. The WACC is driven by a combination of buoyancy forcing from the Po River (northern Adriatic) and wind forcing from northeasterly Bora winds. The large seasonal pulse of freshwater (during the winter) from the Po River influences WACC strength; however, preliminary results from current measurements and model runs indicate that the WACC responds quickly and strongly to Bora wind events, with a strengthening of the current moving southward. Along-margin sediment transport to the south is significantly increased as a result of Bora wind events, presumably because of enhanced wave resuspension and WACC velocity. Elevated sediment fluxes have been observed in both the upper water column (i.e., core of the WACC) and bottom boundary layer (BBL) during these events, which suggests that wind-driven currents may be coupled with the near-bottom transport. This study addresses the interaction of the WACC with the BBL and the impact of this interaction on sediment transport in the western Adriatic. Two benthic tripods were deployed from November 2002 to June 2003 on an across-shelf transect near the Chienti River (at 10 and 20-m water depth), in the region where WACC begins to intensify (200 km south of Po River). Continuous measurements of suspended sediment concentration and current velocity were recorded in the upper-water column and BBL to document sediment transport events. A time series of sediment fluxes and shear velocities (from currents only, u*c; from waves and currents, u*wc) were calculated from these data. Results show that suspended sediment concentrations near the seabed (few cmab) during Bora wind events are strongly correlated with u*wc, which supports a previous hypothesis that wave resuspension (rather than direct fluvial input) is responsible for much of the suspended sediment available for transport southward of the Po River. In contrast, suspended sediment concentrations farther away from the bed (50 cmab) are highly correlated with u*c, but not with u*wc. These results suggest that WACC velocity during Bora events controls the ability of sediment to escape the wave boundary layer and be suspended farther away from the seabed. This implies that turbulence induced by currents, rather than waves, allows sediment to move higher in the water column and become available for transport by fast-moving currents generated by the WACC, thus producing strong southward sediment fluxes observed during Bora events. Specific mechanisms responsible for the vertical structure of suspended sediment and estimates of vertically integrated fluxes during these Bora events are yet to be established because of the difficulty in estimating suspended sediment concentrations throughout the water column from acoustic data; these issues are still under investigation and progress will be assessed.

Glider Observations of Sediment Resuspension in a Middle Atlantic Bight Fall Transition Storm

DTIC Science & Technology

2008-06-14

response within the lower water column only was observed for sediment resuspension on the outer shelf during Tropical Storm Ernesto , which also occurred when...sediment types in the MAB was summarized by Amato (1994) using data mostly from U.S. Geological Survey databases or state geological surveys and...shelf ( Amato 1994) and suggests that the storm resuspended the sediment from the sandy bottom. Physical processes driving the sediment resuspension

Fishery resource utilization of a restored estuarine borrow pit: a beneficial use of dredged material case study.

PubMed

Reine, Kevin; Clarke, Douglas; Ray, Gary; Dickerson, Charles

2013-08-15

Numerous pits in coastal waters are subject to degraded water quality and benthic habitat conditions, resulting in degraded fish habitat. A pit in Barnegat Bay, New Jersey (USA) was partially filled with dredged sediment to increase flushing, alleviate hypoxia, and enhance benthic assemblages. Restoration objectives were assessed in terms of benthic community parameters and fishery resource occupation. Restoration resulted in increased benthic diversity (bottom samples) and the absence of water column stratification. Fisheries resources occupied the entire water column, unlike pre-restoration conditions where finfish tended to avoid the lower water column. The partial restoration option effectively reproduced an existing borrow pit configuration (Hole #5, control), by decreasing total depth from -11 m to -5.5 m, thereby creating a habitat less susceptible to hypoxic/anoxic conditions, while retaining sufficient vertical relief to maintain associations with juvenile weakfish and other forage fishes. Partially filling pits using dredged material represents a viable restoration alternative. Published by Elsevier Ltd.

In situ redox manipulation of subsurface sediments from Fort Lewis, Washington: Iron reduction and TCE dechlorination mechanisms

DOE Office of Scientific and Technical Information (OSTI.GOV)

JE Szecsody; JS Fruchter; DS Sklarew

2000-03-21

Pacific Northwest National Laboratory (PNNL) conducted a bench-scale study to determine how effective chemically treated Ft. Lewis sediments can degrade trichloroethylene (TCE). The objectives of this experimental study were to quantify: (1) sediment reduction and oxidation reactions, (2) TCE degradation reactions, and (3) other significant geochemical changes that occurred. Sediment reduction and oxidation were investigated to determine the mass of reducible iron in the Ft. Lewis sediments and the rate of this reduction and subsequent oxidation at different temperatures. The temperature dependence was needed to be able to predict field-scale reduction in the relatively cold ({approximately}11 C) Ft. Lewis aquifer.more » Results of these experiments were used in conjunction with other geochemical and hydraulic characterization to design the field-scale injection experiment and predict barrier longevity. For example, the sediment reduction rate controls the amount of time required for the dithionite solution to fully react with sediments. Sediment oxidation experiments were additionally conducted to determine the oxidation rate and provide a separate measure of the mass of reduced iron. Laboratory experiments that were used to meet these objectives included: (1) sediment reduction in batch (static) systems, (2) sediment reduction in 1-D columns, and (3) sediment oxidation in 1-D columns. Multiple reaction modeling was conducted to quantify the reactant masses and reaction rates.« less

Water-quality and biologic data for the Blue River basin, Kansas City metropolitan area, Missouri and Kansas, October 2000 to October 2004

USGS Publications Warehouse

Wilkison, Donald H.; Armstrong, Daniel J.; Brown, Rebecca E.; Poulton, Barry C.; Cahill, Jeffrey D.; Zaugg, Steven D.

2005-01-01

This report presents water-quality and biologic data collected in the Blue River Basin, metropolitan Kansas City, Missouri and Kansas, from October 2000 to October 2004. Data were collected in cooperation with the city of Kansas City, Missouri, Water Services Department as part of an ongoing study designed to characterize long-term water-quality trends in the basin and to provide data to support a strategy for combined sewer overflow control. These data include values of physical properties, fecal indicator bacteria densities, suspended sediment, and concentrations of major ions, nutrients, trace elements, organic wastewater compounds, and pharmaceutical compounds in base-flow and stormflow stream samples and bottom sediments. Six surface-water sites in the basin were sampled 13 times during base-flow conditions and during a minimum of 7 storms. Benthic macroinvertebrate communities are described at 10 sites in the basin and 1 site outside the basin. Water-column and bottom-sediment data from impounded reaches of Brush Creek are provided. Continuous specific conductance, pH, water-quality temperature, turbidity, and dissolved oxygen data are provided for two streams-the Blue River and Brush Creek. Sampling, analytical, and quality assurance methods used in data collection during the study also are described in the report.

Speciation of Mercury in Selected Areas of the Petroleum Value Chain.

PubMed

Avellan, Astrid; Stegemeier, John P; Gai, Ke; Dale, James; Hsu-Kim, Heileen; Levard, Clément; O'Rear, Dennis; Hoelen, Thomas P; Lowry, Gregory V

2018-02-06

Petroleum, natural gas, and natural gas condensate can contain low levels of mercury (Hg). The speciation of Hg can affect its behavior during processing, transport, and storage so efficient and safe management of Hg requires an understanding of its chemical form in oil, gas and byproducts. Here, X-ray absorption spectroscopy was used to determine the Hg speciation in samples of solid residues collected throughout the petroleum value chain including stabilized crude oil residues, sediments from separation tanks and condensate glycol dehydrators, distillation column pipe scale, and biosludge from wastewater treatment. In all samples except glycol dehydrators, metacinnabar (β-HgS) was the primary form of Hg. Electron microscopy on particles from a crude sediment showed nanosized (<100 nm) particles forming larger aggregates, and confirmed the colocalization of Hg and sulfur. In sediments from glycol dehydrators, organic Hg(SR) 2 accounted for ∼60% of the Hg, with ∼20% present as β-HgS and/or Hg(SR) 4 species. β-HgS was the predominant Hg species in refinery biosludge and pipe scale samples. However, the balance of Hg species present in these samples depended on the nature of the crude oil being processed, i.e. sweet (low sulfur crudes) vs sour (higher sulfur crudes). This information on Hg speciation in the petroleum value chain will inform development of better engineering controls and management practices for Hg.

Enhanced phosphorus reduction in simulated eutrophic water: a comparative study of submerged macrophytes, sediment microbial fuel cells, and their combination.

PubMed

Xu, Peng; Xiao, Enrong; Xu, Dan; Li, Juan; Zhang, Yi; Dai, Zhigang; Zhou, Qiaohong; Wu, Zhenbin

2018-05-01

The phosphorus reduction in water column was attempted by integrating sediment microbial fuel cells (SMFCs) with the submerged macrophyte Vallisneria spiralis. A comparative study was conducted to treat simulated water rich in phosphate with a control and three treatments: SMFC alone (SMFC), submerged macrophytes alone (macophyte), and combined macrophytes and fuel cells (M-SMFC). All treatments promoted phosphorus flux from the water column to sediments. Maximum phosphorus reduction was obtained in proportion to the highest stable phosphorus level in sediments in M-SMFC. For the initial phosphate concentrations of 0.2, 1, 2, and 4 mg/L, average phosphate values in the overlying water during four phases decreased by 33.3% (25.0%, 8.3%), 30.8% (5.1%, 17.9%), 36.5% (27.8%, 15.7%), and 36.2% (0.7%, 22.1%) for M-SMFC (macrophyte, SMFC), compared with the control. With macrophyte treatment, the obvious phosphorus release from sediments was observed during the declining period. However, such phenomenon was significantly inhibited with M-SMFC. The electrogenesis bacteria achieved stronger phosphorus adsorption and assimilation was significantly enriched on the closed-circuit anodes. The higher abundance of Geobacter and Pseudomonas in M-SMFC might in part explain the highest phosphorus reduction in the water column. M-SMFC treatment could be promising to control the phosphorus in eutrophic water bodies.

The hydrodynamic drag and the mobilisation of sediment into the water column of towed fishing gear components

NASA Astrophysics Data System (ADS)

O'Neill, F. G.; Summerbell, Keith David

2016-12-01

The hydrodynamic drag of towed fishing gears leads to direct impacts on the benthic environment, and can play a major role in the overall economic efficiency of the fishing operation and emissions of nitrogen oxides, sulphur oxides and greenhouse gases such as CO2. Here we investigate some of the underpinning processes which govern these issues and make direct hydrodynamic drag measurements and calculate the hydrodynamic drag coefficients for a range of well-defined gear components that, when fished, are in contact with the seabed. We measure the concentration and particle size distribution of the sediment mobilised into the water column in the wake of these gear elements, at a range of towing speeds, and demonstrate that as the hydrodynamic drag increases the amount of sediment mobilised also increases. We also vary the weight of the elements and show that this does not influence the amount of sediment put into the water column. These results provide a better understanding of the physical and mechanical processes that take place when a towed fishing gear interacts with the seabed. They will permit the development of more fuel efficient gears and gears of reduced benthic impact and will improve the empirical modelling of the sediment mobilised into the turbulent wake behind towed fishing gears which will lead to better assessments of the environmental and ecological impact of fishing gears.

Study on the fate of petroleum-derived polycyclic aromatic hydrocarbons (PAHs) and the effect of chemical dispersant using an enclosed ecosystem, mesocosm.

PubMed

Yamada, Mihoko; Takada, Hideshige; Toyoda, Keita; Yoshida, Akihiro; Shibata, Akira; Nomura, Hideaki; Wada, Minoru; Nishimura, Masahiko; Okamoto, Ken; Ohwada, Kouichi

2003-01-01

Polycyclic Aromatic Hydrocarbons (PAHs) are one of the components found in oil and are of interest because some are toxic. We studied the environmental fate of PAHs and the effects of chemical dispersants using experimental 500 l mesocosm tanks that mimic natural ecosystems. The tanks were filled with seawater spiked with the water-soluble fraction of heavy residual oil. Water samples and settling particles in the tanks were collected periodically and 38 PAH compounds were analyzed by gas chromatography-mass spectrometry (GC-MS). Low molecular weight (LMW) PAHs with less than three benzene rings disappeared rapidly, mostly within 2 days. On the other hand, high molecular weight (HMW) PAHs with more than four benzene rings remained in the water column for a longer time, up to 9 days. Also, significant portions (10-94%) of HMW PAHs settled to the bottom and were caught in the sediment trap. The addition of chemical dispersant accelerated dissolution and biodegradation of PAHs, especially HMW PAHs. The dispersant amplified the amounts of PAHs found in the water column. The amplification was the greater for the more hydrophobic PAHs, with an enrichment factor of up to six times. The increased PAHs resulting from dispersant use overwhelmed the normal degradation and, as a result, higher concentrations of PAHs were observed in water column throughout the experimental period. We conclude that the addition of the dispersant could increase the concentration of water column PAHs and thus increase the exposure and potential toxicity for organisms in the natural environment. By making more hydrocarbon material available to the water column, the application of dispersant reduced the settling of PAHs. For the tank with dispersant, only 6% of chrysene initially introduced was detected in the sediment trap whereas 70% was found in the trap in the tank without dispersant.

Immobilization of U(VI) from Oxic Groundwater by Hanford 300 Area Sediments and Effects of Columbia River Water

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ahmed, B.; Cao, Bin; Mishra, Bhoopesh

2012-09-23

Regions within the U.S. Department of Energy Hanford 300 Area (300 A) site experience periodic hydrologic influences from the nearby Columbia River as a result of changing river stage, which causes changes in groundwater elevation, flow direction and water chemistry. An important question is the extent to which the mixing of Columbia River water and groundwater impacts the speciation and mobility of uranium (U). In this study, we designed experiments to mimic interactions among U, oxic groundwater or Columbia River water, and 300 A sediments in the subsurface environment of Hanford 300 A. The goals were to investigate mechanisms of:more » 1) U immobilization in 300 A sediments under bulk oxic conditions and 2) U remobilization from U-immobilized 300 A sediments exposed to oxic Columbia River water. Initially, 300 A sediments in column reactors were fed with U(VI)-containing oxic 1) synthetic groundwater (SGW), 2) organic-amended SGW (OA-SGW), and 3) de-ionized (DI) water to investigate U immobilization processes. After that, the sediments were exposed to oxic Columbia River water for U remobilization studies. The results reveal that U was immobilized by 300 A sediments predominantly through reduction (80-85%) when the column reactor was fed with oxic OA-SGW. However, U was immobilized by 300 A sediments through adsorption (100%) when the column reactors were fed with oxic SGW or DI water. The reduced U in the 300 A sediments fed with OA-SGW was relatively resistant to remobilization by oxic Columbia River water. Oxic Columbia River water resulted in U remobilization (~7%) through desorption, and most of the U that remained in the 300 A sediments fed with OA-SGW (~93%) was in the form of uraninite nanoparticles. These results reveal that: 1) the reductive immobilization of U through OA-SGW stimulation of indigenous 300 A sediment microorganisms may be viable in the relatively oxic Hanford 300 A subsurface environments and 2) with the intrusion of Columbia River water, desorption may be the primary process resulting in U remobilization from OA-SGW-stimulated 300 A sediments at the subsurface of the Hanford 300 A site.« less

The sediment budget of an urban coastal lagoon (Jamaica Bay, NY) determined using 234Th and 210Pb

NASA Astrophysics Data System (ADS)

Renfro, Alisha A.; Cochran, J. Kirk; Hirschberg, David J.; Bokuniewicz, Henry J.; Goodbred, Steven L.

2016-10-01

The sediment budget of Jamaica Bay (New York, USA) has been determined using the natural particle-reactive radionuclides 234Th and 210Pb. Inventories of excess thorium-234 (234Thxs, half-life = 24.1 d) were measured in bottom sediments of the Bay during four cruises from September 2004 to July 2006. The mean bay-wide inventory for the four sampling periods ranged from 3.5 to 5.0 dpm cm-2, four to six times that expected from 234Th production in the overlying water column. The presence of dissolved 234Th and a high specific activity of 234Thxs on particles at the bay inlet (∼30 dpm g-1) indicated that both dissolved and particulate 234Th could be imported into the bay from the ocean. Based on these observations, a mass balance of 234Th yields an annual input of ∼39 ± 14 × 1010 g sediment into the bay. Mass accumulation rates determined from profiles of excess 210Pb (half-life = 22.3 y) in sediment cores require annual sediment import of 7.4 ± 4.5 × 1010 g. Both radionuclides indicate that there is considerable marine-derived sediment import to Jamaica Bay, consistent with earlier work using 210Pb. Such sediment input may be important in sustaining longer-term accretion rates of salt marshes in the bay.

New Technique for Speciation of Uranium in Sediments Following Acetate-Stimulated Bioremediation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

2011-06-22

Acetate-stimulated bioremediation is a promising new technique for sequestering toxic uranium contamination from groundwater. The speciation of uranium in sediments after such bioremediation attempts remains unknown as a result of low uranium concentration, and is important to analyzing the stability of sequestered uranium. A new technique was developed for investigating the oxidation state and local molecular structure of uranium from field site sediments using X-Ray Absorption Spectroscopy (XAS), and was implemented at the site of a former uranium mill in Rifle, CO. Glass columns filled with bioactive Rifle sediments were deployed in wells in the contaminated Rifle aquifer and amendedmore » with a hexavalent uranium (U(VI)) stock solution to increase uranium concentration while maintaining field conditions. This sediment was harvested and XAS was utilized to analyze the oxidation state and local molecular structure of the uranium in sediment samples. Extended X-Ray Absorption Fine Structure (EXAFS) data was collected and compared to known uranium spectra to determine the local molecular structure of the uranium in the sediment. Fitting was used to determine that the field site sediments did not contain uraninite (UO{sub 2}), indicating that models based on bioreduction using pure bacterial cultures are not accurate for bioremediation in the field. Stability tests on the monomeric tetravalent uranium (U(IV)) produced by bioremediation are needed in order to assess the efficacy of acetate-stimulation bioremediation.« less

Effect of high flow events on spatiotemporal variation of E. coli concentrations in creek sediments

USDA-ARS?s Scientific Manuscript database

Sediments can harbor large populations of Escherichia coli often times in greater amounts than the overlying water column. Resuspension of sediments during storm events causes the release of E. coli which drastically changes microbial water quality metrics. It is not well known how populations of E....

[Environmental Hazards Assessment Program annual report, June 1992--June 1993]. Use of diatom distributions to monitor environmental health

DOE Office of Scientific and Technical Information (OSTI.GOV)

Levine, R.H.

1993-12-01

A variety of approaches has been used in the past to assess the environmental impact of anthropogenic contaminants. One reliable index for aquatic environments is the analysis of diatom species distribution; the focus in this case being on the Savannah River. The completed objectives of this study were: (A) the development and use of procedures for measuring diatom distribution in the water column and (B) the development and evaluation of sediment sampling methods for retrospective analysis.

Polycyclic aromatic hydrocarbons (PAHs) in the water column and sediment core of Deep Bay, South China

NASA Astrophysics Data System (ADS)

Qiu, Yao-Wen; Zhang, Gan; Liu, Guo-Qing; Guo, Ling-Li; Li, Xiang-Dong; Wai, Onyx

2009-06-01

The levels of 15 polycyclic aromatic hydrocarbons (PAHs) were determined in seawater, suspended particulate matter (SPM), surface sediment and core sediment samples of Deep Bay, South China. The average concentrations Σ 15PAHs were 69.4 ± 24.7 ng l -1 in seawater, 429.1 ± 231.8 ng g -1 in SPM, and 353.8 ± 128.1 ng g -1 dry weight in surface sediment, respectively. Higher PAH concentrations were observed in SPM than in surface sediment. Temporal trend of PAH concentrations in core sediment generally increased from 1948 to 2004, with higher concentrations in top than in sub-surface, implying a stronger recent input of PAHs owing to the rapid economic development in Shenzhen. Compared with historical data, the PAH levels in surface sediment has increased, and this was further confirmed by the increasing trend of PAHs in the core sediment. Phenanthrene, fluoranthene and pyrene dominated in the PAH composition pattern profiles in the Bay. Compositional pattern analysis suggested that PAHs in the Deep Bay were derived from both pyrogenic and petrogenic sources, and diesel oil leakage, river runoff and air deposition may serve as important pathways for PAHs input to the Bay. Significant positive correlations between partition coefficient in surface sediment to that in water ( KOC) of PAH and their octanol/water partition coefficients ( KOW) were observed, suggesting that KOC of PAHs in sediment/water of Deep Bay may be predicted by the corresponding KOW.

Anomalous electrical signals associated with microbial activity: Results from Iron and Nitrate-Reducing Columns

NASA Astrophysics Data System (ADS)

Aaron, R. B.; Zheng, Q.; Flynn, P.; Singha, K.; Brantley, S.

2008-12-01

Three flow-through columns outfitted with Ag/AgCl electrodes were constructed to test the effects of different microbial processes on the geophysical measurements of self potential (SP), bulk electrical conductivity (σ b), and induced polarization (IP). The columns were filled with sieved, Fe-bearing subsurface sediment from the Delmarva Peninsula near Oyster, VA, inoculated (9:1 ratio) with a freshly-collected, shallow subsurface sediment from a wetland floodplain (Dorn Creek) near Madison, WI. Each of the columns was fed anoxic and sterile PIPES buffered artificial groundwater (PBAGW) containing different concentrations of acetate and nitrate. The medium fed to Column 1 (nitrate-reducing) was amended with 100 μM acetate and 2 mM nitrate. Column 2 (iron-reducing) was run with PBAGW containing 1.0 mM acetate and 0 mM nitrate. Column 3 (alternating redox state) was operated under conditions designed to alternately stimulate nitrate-reducing and iron-reducing populations to provide conditions, i.e., the presence of both nitrate and microbially-produced Fe(II), that would allow growth of nitrate-dependent Fe(II)-oxidizing populations. We operated Column 3 with a cycling strategy of 14-18 days of high C medium (1 mM acetate and 100 μ M nitrate) followed by 14-18 days of low C medium (100 μ M acetate and 2 mM nitrate). Effluent chemistry (NO3-, NO2-, NH4+, acetate, and Fe2+) was sampled daily for four months so as to be concurrent with the electrical measurements. We observed chemical evidence of iron reduction (dissolved [Fe(II)] = 0.2mM) in the effluent from the iron reduction and alternating redox columns. Chemical depletion of NO3- ([NO3-] ranged from 1 to 0.02mM), the production of NO2-, and possible production of NH4+ (0.2 mM) was observed in the nitrate reducing column as well as the alternating redox column. All three columns displayed loss of acetate as microbial activity progressed. σ b remained constant in the alternating redox column (~0.15 S/m), increased in the iron reducing column (0.2 S/m to 0.8 S/m) and increased markedly in the nitrate reducing column (0.3 S/m to 1.2 S/m). This runs counter to our expectations. We expected to see an increase in σ b as [Fe(II)] increased and a decrease in σ b as nitrate was removed from the columns. All three columns showed little or no IP response at the outset and developed negative chargeabilities over the course of the experiment (as great as -20 mV/V). These values are anomalous and difficult to interpret. SP signals show the most variable response. Initially all three columns had SP values at or very near 0 mV. SP for the nitrate reducing column remained constant around 0mV. The iron reducing column displayed an increasingly negative SP response for the first two months that became constant at about -200mV for the remainder of the experiment. The alternating redox column displayed an oscillating signal recording large positive values (~475 mV) when nitrate concentrations were low and returning to a baseline value (~160mV) when nitrate was introduced to the column. The results of these column experiments indicate that there is a link between microbial activity and geophysical signals and that further research is needed to better quantify these signals.

Physical determinants of phytoplankton production, algal stoichiometry, and vertical nutrient fluxes.

PubMed

Jäger, Christoph G; Diehl, Sebastian; Emans, Maximilian

2010-04-01

Most phytoplankters face opposing vertical gradients in light versus nutrient supplies but have limited capacities for vertical habitat choice. We therefore explored a dynamical model of negatively buoyant algae inhabiting a one-dimensional water column to ask how water column depth and turbulence constrain total (areal) phytoplankton biomass. We show that the population persistence boundaries in water column depth-turbulence space are set by sinking losses and light limitation but that nutrients are most limiting to total biomass in water columns that are neither too shallow or too weakly mixed (where sinking losses prevail) nor too deep and turbulent (where light limitation prevails). In shallow waters, the most strongly limiting process is nutrient influx to the bottom of the water column (e.g., from sediments). In deep waters, the most strongly limiting process is turbulent upward transport of nutrients to the photic zone. Consequently, the highest total biomasses are attained in turbulent waters at intermediate water column depths and in deep waters at intermediate turbulences. These patterns are insensitive to the assumption of fixed versus flexible algal carbon-to-nutrient stoichiometry, and they arise irrespective of whether the water column is a surface layer above a deep water compartment or has direct contact with sediments.

Accumulation of artificial radionuclides in deep sediments of the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Garcia-Orellana, J.; Sanchez-Cabeza, J. A.; Masque, P.; Costa, E.; Bruach, J. M.; Morist, A.; Luna, J. A.

2003-04-01

Concentrations and inventories of artificial radionuclides (90Sr, 137Cs and 239,40Pu) were determined in deep sediment cores (3.000 m) collected in the western and eastern basins of the Mediterranean Sea in the frame of the ADIOS project. Artificial radionuclides enter the Mediterranean Sea mainly though atmospheric deposition after nuclear weapons tests and the Chernobyl accident, but also through the river discharge of effluents of nuclear facilities (e.g. Rhone and Ebro rivers). The aim of this work is to investigate the degree by which pollutants are transferred to the deep environment of the Mediterranean Sea as a basis to elucidate their effects on benthic organisms. The mean inventories of 239+240Pu, 137Cs and 90Sr in the Western basin are 2.77 ± 0.26, 68 ± 12 and < 7 Bq\\cdotm-2 respectively and 3.29 ± 0.60, 115 ± 33 and 249±154 Bq\\cdotm-2 in the Eastern basin. The activity - depth profiles of 210Pb, together with 14C dating, indicate that sediment mixing redistributes the artificial radionuclides within the first 2 cm of the sedimentary column. Artificial radionuclides inventories in the deep-sea sediments were used to calculate the fraction of the total inventory of artificial radionuclides that is accumulated in the deep sea sediments after scavenging from the water column. Indeed, a balance of the radionuclide distributions in the water column allows evaluating the importance of lateral transport of particulate matter from the continental margins on the accumulation of artificial radionuclides in the deep, open Mediterranean Sea. This is achieved in i) comparison with reported data from coastal areas at different locations in the Mediterranean Sea, and ii) balance of the distribution of the natural radionuclide 210Pb in studied areas (vertical profiles of dissolved and particulate activities, fluxes determined by using sediment trap deployed at different depths and inventories in the bottom sediments). The results, taking into account radioactive decay and exchange fluxes through the Gibraltar Strait, permit to estimate the residence times of pollutants in the water column and predict future evolution of their distributions.

Distribution and transport of total mercury and methylmercury in mercury-contaminated sediments in reservoirs and wetlands of the Sudbury River, east-central Massachusetts

USGS Publications Warehouse

Colman, John A.; Waldron, Marcus C.; Breault, Robert F.; Lent, Robert M.

1999-01-01

Total mercury and methylmercury were measured in 4 reservoir cores and 12 wetland cores from Sudbury River. The distribution of total mercury and methylmercury in these cores was evaluated to determine the potential for total mercury and methylmercury transport from reservoir and wetlands sediments to the water column. Concentrations of methylmercury were corrected for an analytical artifact introduced during the separation distillation used in the analysis procedure. Corrected methylmercury concentrations correlated with total mercury concentrations in bulk sediment from below the top layers of reservoir and wetland cores; methylmercury concentrations at the top layers of cores were relatively high, however, and were not correlated with total mercury concentrations. Concentrations of methylmercury in pore water were positively correlated with methylmercury concentrations in the bulk sediment. High concentrations of total mercury and methylmercury in sediment (73 and 0.047 micrograms per gram dry-weight basis, respectively) contributed less to the water column in the reservoir than in the wetlands probably because of burial by low concentration sediment and differences in the processes available to transport mercury from the sediments to the water in the reservoirs, as compared to the wetlands .

Origin and transport of (238)U and (226)Ra in riverine, estuarine and marine sediments of the Krka River, Croatia.

PubMed

Cukrov, Neven; Mlakar, Marina; Cuculić, Vlado; Barisić, Delko

2009-06-01

Spatial distribution of (238)U and (226)Ra activities in sediment columns along the Krka River and estuary, were studied using gamma spectrometry. Markedly different (238)U and (226)Ra activities between riverine, estuarine and marine sediments were observed. Distribution of these radionuclides, as well as their anthropogenic and natural origin, was evaluated by activity measurements, taking into account sedimentation rates estimated by (137)Cs distribution in sediment columns. Naturally present (238)U and (226)Ra activities were highest in riverine and lowest in marine sediments. (238)U and (226)Ra activities in historic riverine sediments revealed anthropogenic influence from town of Knin, which diminished for 15-20% in 1990s due to warfare that caused stop of industrial, agricultural and transport activities. Drainage of the flysch material naturally elevates (238)U and (226)Ra activities in the vicinity of its inflow in the upper part of estuary. (238)U and (226)Ra from the phosphate ore discharge in the port of Sibenik did not spread further in estuary, which was also confirmed by (238)U and (226)Ra activities detected in Mytilus sp. mussels' tissue.

Assessment of possible sources of microbiological contamination and water-quality characteristics of the Jacks Fork, Ozark National Scenic Riverways, Missouri; phase II

USGS Publications Warehouse

Davis, Jerri V.; Richards, Joseph M.

2002-01-01

In 1998, an 8-mile reach of the Jacks Fork was included on Missouri?s list of impaired waters as required by Section 303(d) of the Federal Clean Water Act. The identified pollutant on the Jacks Fork was fecal coliform bacteria. Potential sources of fecal contamination to the Jacks Fork include a wastewater treatment plant; campground pit-toilet or septic-system effluent; a large commercial, cross-country horseback trail riding facility; canoeists, boaters, and tubers; and cows.The U.S. Geological Survey, in cooperation with the National Park Service, conducted a study to better understand the extent and sources of microbiological contamination within the Jacks Fork from Alley Spring to the mouth, which includes the 8-mile 303(d) reach. Identification of the sources would provide the National Park Service and the State of Missouri with the information needed to craft a solution of abatement, regulation, prevention, and mitigation with the end result being the removal of the Jacks Fork from the 303(d) list. Fifteen sites were sampled from November 1999 through December 2000. An additional site was sampled one time. Samples were collected mostly during base-flow conditions during a variety of nonrecreational and recreational season river uses. Samples were analyzed for selected fecal indicator bacteria, physical properties, nutrients, and wastewater organic compounds. During the sampling period, the whole-body-contact recreation standard for fecal coliform (200 colonies per 100 milliliters of sample) was exceeded at three sites on August 10, 2000, and also at one site on May 11, June 7, and October 3, 2000. Fecal coliform densities and instantaneous loads generally increased from background concentrations at the Eminence site, peaked about 2 river miles downstream, and then decreased until the most downstream site sampled. Generally, the largest densities and loads at sites downstream from Eminence not related to wet-weather flow were observed during a trail ride held August 6 to12, 2000. A 24-hour sample collection effort was conducted the weekend of July 15 and 16, 2000, to investigate the effect that large numbers of swimmers, canoeists, and tubers had on fecal coliform densities in the Jacks Fork. Five or six samples were collected at six sites between Saturday morning and the following Sunday afternoon. No fecal coliform density at any of the sites sampled exceeded the whole-body-contact recreation standard. Because bacteria survive longer in stream-bed sediments than in water, a source of bacteria in the water column could be from resuspension of accumulated bacteria from streambed sediments. Water and streambed-sediment samples were collected at three sites on August 3, 2000, 1 week before a trail ride and again at three sites on 2 Assessment of Possible Sources of Microbiological Contamination of the Jacks Fork, Missouri?Phase II August 8, 2000, during a trail ride. Results indicate that fecal coliform bacteria densities increased substantially in the streambed sediment and the water column during the trail ride.Sixty-five Escherichia coli isolates obtained from water samples collected at 9 sites and 23 Escherichia coli isolates obtained from stream-bed-sediment samples collected at 5 sites were submitted for ribotyping analysis. Samples were collected in 2000 during a variety of nonrecreational and recreational season river uses, including trail rides, canoeing, tubing, and swimming. Of the 65 isolates from water samples, 40 percent were identified as originating from sewage, 29 percent from horse, 11 percent from cow, and 20 percent from an unknown source. Of the 23 isolates from streambed-sediment samples, 39 percent were identified as originating from sewage, 35 percent from horse, 13 percent from cow, and 13 percent from unknown sources.Analysis of physical property (dissolved oxygen, pH, specific conductance, and temperature) and nutrient (dissolved nitrite plus nitrate and total phosphorus) data

Spatial distribution and ecotoxicity of petroleum hydrocarbons in sediments from the Galicia continental shelf (NW Spain) after the Prestige oil spill.

PubMed

Franco, M A; Viñas, L; Soriano, J A; de Armas, D; González, J J; Beiras, R; Salas, N; Bayona, J M; Albaigés, J

2006-01-01

The distribution of aliphatic and aromatic hydrocarbons was determined in surface sediments collected at 36 stations along the Galicia continental shelf (NW Spain), following the Prestige oil spill. Sampling was performed in December 2002, just after the accident, and in February and September 2003. Concentrations of PAHs (summation operator 13 parent components) were in the range of 0.9-422 microg/kgdw, the highest values being close to coastal urban areas (e.g. Pontevedra and A Coruña), whereas in the stations of the area most heavily impacted by the spill (off Costa da Morte) concentrations were in the range of 14.8-89.6 microg/kgdw, with a certain predominance of alkylated compounds, which may suggest a mixture of petrogenic and pyrolytic sources. The detailed study of petrogenic molecular markers (e.g. steranes and triterpanes) showed the occurrence of an old (weathered) petrogenic chronic pollution in the shelf sediments but not of the Prestige oil, with the possible exception of few stations in the area of Costa da Morte. This was attributed to the heavy nature of the spilled oil that was barely dispersed in the water column and mainly stranded on the coast or sedimented in the form of oil patches. The addition of increasing amounts of fuel oil to a representative sediment sample showed that the molecular indices were indicative of the presence of the Prestige oil when the amount was above 1g/kg of sediment. The toxicity of selected samples (showing the higher PAH concentrations) was tested using the bivalve embryogenesis bioassay. Embryogenesis success reached high values in all cases (80-88%, with 86% in the control), indicating a lack of toxicity in the sediments and supporting the conclusion that the patchiness of the fuel eventually reaching the seafloor reduced its impact on the benthic communities of the Galician shelf.

Mercury Stable Isotopic Composition of Monomethylmercury in Estuarine Sediments and Pure Cultures of Mercury Methylating Bacteria

NASA Astrophysics Data System (ADS)

Janssen, S.; Johnson, M. W.; Barkay, T.; Blum, J. D.; Reinfelder, J. R.

2014-12-01

Tracking monomethylmercury (MeHg) from its source in soils and sediments through various environmental compartments and transformations is critical to understanding its accumulation in aquatic and terrestrial food webs. Advances in the field of mercury (Hg) stable isotopes have allowed for the tracking of discrete Hg sources and the examination of photochemical and bacterial transformations. Despite analytical advances, measuring the Hg stable isotopic signature of MeHg in environmental samples or laboratory experiments remains challenging due to difficulties in the quantitative separation of MeHg from complex matrices with high concentrations of inorganic Hg. To address these challenges, we have developed a MeHg isolation method for sediments and bacterial cultures which involves separation by gas chromatography. The MeHg eluting from the GC is passed through a pyrolysis column and purged onto a gold amalgam trap which is then desorbed into a final oxidizing solution. A MeHg reference standard carried through our separation process retained its isotopic composition within 0.02 ‰ for δ202Hg, and for native estuarine sediments, MeHg recoveries were 80% to 100%. For sediment samples from the Hackensack and Passaic Rivers (New Jersey, USA), δ202Hg values for MeHg varied from -1.2 to +0.58 ‰ (relative to SRM 3133) and for individual samples were significantly different from that of total Hg (-0.38 ± 0.06 ‰). No mass independent fractionation was observed in MeHg or total Hg from these sediments. Pure cultures of Geobacter sulfurreducens, grown under fermentative conditions showed preferential enrichment of lighter isotopes (lower δ202Hg) during Hg methylation. The Hg stable isotope signatures of MeHg in sediments and laboratory methylation experiments will be discussed in the context of the formation and degradation of MeHg in the environment and the bioaccumulation of MeHg in estuarine food webs.

GEOELECTRICAL EVIDENCE OF MICROBIAL DEGRADATION OF DIESEL CONTAMINATED SEDIMENTS

EPA Science Inventory

The alteration of physical properties by microbial activity in petroleum contaminated sediments was investigated using geophysical techniques in laboratory column experiments. Microbial population growth was determined by the Most Probable Number technique (MPN), community dynami...

Trace-metal concentrations in sediment and water and health of aquatic macroinvertebrate communities of streams near Park City, Summit County, Utah

USGS Publications Warehouse

Giddings, Elis M.P.; Hornberger, Michelle I.; Hadley, Heidi K.

2001-01-01

The spatial distribution of metals in streambed sediment and surface water of Silver Creek, McLeod Creek, Kimball Creek, Spring Creek, and part of the Weber River, near Park City, Utah, was examined. From the mid-1800s through the 1970s, this region was extensively mined for silver and lead ores. Although some remediation has occurred, residual deposits of tailing wastes remain in place along large sections of Silver Creek. These tailings are the most likely source of metals to this system. Bed sediment samples were collected in 1998, 1999, and 2000 and analyzed using two extraction techniques: a total extraction that completely dissolves all forms of metals in minerals and trace elements associated with the sediment; and a weak-acid extraction that extracts the metals and trace elements that are only weakly adsorbed onto the sediment surface. This latter method is used to determine the more biologically relevant fraction of metal complexed onto the sediment. Water samples were collected in March and August 2000 and were analyzed for total and dissolved trace metals.Concentrations of silver, cadmium, copper, lead, mercury, and zinc in the streambed sediment of Silver Creek greatly exceeded background concentrations. These metals also exceeded established aquatic life criteria at most sites. In the Weber River, downstream of the confluence with Silver Creek, concentrations of cadmium, lead, zinc, and total mercury in streambed sediment also exceeded aquatic life guidelines, however, concentrations of metals in streambed sediment of McLeod and Kimball Creeks were lower than Silver Creek. Water-column concentrations of zinc, total mercury, and methylmercury in Silver Creek were high relative to unimpacted sites, and exceeded water quality criteria for the protection of aquatic organisms. Qualitative measurements of the macroinvertebrate community in Silver Creek were compared to the spatial distribution of metals in streambed sediment. The data indicate that impairment related to metal concentration exists in Silver Creek.

A shift in the biogenic silica of sediment in the Larsen B continental shelf, off the Eastern Antarctic Peninsula, resulting from climate change.

PubMed

Sañé, Elisabet; Isla, Enrique; Bárcena, María Ángeles; DeMaster, David J

2013-01-01

In 2002, section B of the Larsen ice shelf, off of the Eastern Antarctic Peninsula, collapsed and created the opportunity to study whether the changes at the sea surface left evidence in the sedimentary record. Biogenic silica is major constituent of Antarctic marine sediment, and its presence in the sediment column is associated with diatom production in the euphotic zone. The abundance of diatom valves and the number of sponge spicules in the biogenic silica was analyzed to determine how the origin of the biogenic silica in the upper layers of the sediment column responded to recent environmental changes. Diatom valves were present only in the upper 2 cm of sediment, which roughly corresponds to the period after the collapse of the ice shelf. In contrast, sponge spicules, a more robust form of biogenic silica, were also found below the upper 2 cm layer of the sediment column. Our results indicate that in this region most of the biogenic silica in the sedimentary record originated from sponge spicules rather than diatoms during the time when the sea surface was covered by the Larsen ice shelf. Since the collapse of the ice shelf, the development of phytoplankton blooms and the consequent influx of diatom debris to the seabed have shifted the biogenic silica record to one dominated by diatom debris, as occurs in most of the Antarctic marine sediment. This shift provides further evidence of the anthropogenic changes to the benthic habitats of the Antarctic and will improve the interpretation of the sedimentary record in Polar Regions where these events occur.

Prediction of the fate of p,p'-DDE in sediment on the Palos Verdes shelf, California, USA

USGS Publications Warehouse

Sherwood, C.R.; Drake, D.E.; Wiberg, P.L.; Wheatcroft, R.A.

2002-01-01

Long-term (60-yr) predictions of vertical profiles of p,p???-DDE concentrations in contaminated bottom sediments on the Palos Verdes shelf were calculated for three locations along the 60-m isobath using a numerical solution of the one-dimensional advection-diffusion equation. The calculations incorporated the following processes: sediment deposition (or erosion), depth-dependent solid-phase biodiffusive mixing, in situ diagenetic transformation, and loss of p,p???-DDE across the sediment-water interface by two mechanisms (resuspension of sediments by wave action and subsequent loss of p,p???-DDE to the water column by desorption, and desorption from sediments to porewater and subsequent molecular diffusion to the water column). A combination of field measurements, laboratory analyses, and calculations with supporting models was used to set parameters for the model. The model explains significant features observed in measurements made every 2 years from 1981 to 1997 by the County Sanitation Districts of Los Angeles (LACSD). Analyses of available data suggest that two sites northwest of the Whites Point sewage outfalls will remain depositional, even as particulate supply from the sewage-treatment plant and nearby Portuguese Bend Landslide decreases. At these sites, model predictions for 1991-2050 indicate that most of the existing inventory of p,p???-DDE will remain buried and that surface concentrations will gradually decrease. Analyses of data southeast of the outfalls suggest that erosion is likely to occur somewhere on the southeast edge of the existing effluent-affected deposit, and model predictions for such a site showed that erosion and biodiffusion will reintroduce the p,p???-DDE to the upper layer of sediments, with subsequent increases in surface concentrations and loss to the overlying water column.

Concentrations, loads, and sources of polychlorinated biphenyls, Neponset River and Neponset River Estuary, eastern Massachusetts

USGS Publications Warehouse

Breault, Robert F.

2011-01-01

Polychlorinated biphenyls (PCBs) are known to contaminate the Neponset River, which flows through parts of Boston, Massachusetts, and empties into the Neponset River Estuary, an important fish-spawning area. The river is dammed and impassable to fish. The U.S. Geological Survey, in cooperation with the Massachusetts Department of Fish and Game, Division of Ecological Restoration, Riverways Program, collected, analyzed, and interpreted PCB data from bottom-sediment, water, and (or) fish-tissue samples in 2002, 2004-2006. Samples from the Neponset River and Neponset River Estuary were analyzed for 209 PCB congeners, PCB homologs, and Aroclors. In order to better assess the overall health quality of river-bottom sediments, sediment samples were also tested for concentrations of 31 elements. PCB concentrations measured in the top layers of bottom sediment ranged from 28 nanograms per gram (ng/g) just upstream of the Mother Brook confluence to 24,900 ng/g measured in Mother Brook. Concentrations of elements in bottom sediment were generally higher than background concentrations and higher than levels considered toxic to benthic organisms according to freshwater sediment-quality guidelines defined by the U.S. Environmental Protection Agency. Concentrations of dissolved PCBs in water samples collected from the Neponset River (May 13, 2005 to April 28, 2006) averaged about 9.2 nanograms per liter (ng/L) (annual average of monthly values); however, during the months of August (about 16.5 ng/L) and September (about 15.6 ng/L), dissolved PCB concentrations were greater than 14 ng/L, the U.S. Environmental Protection Agency's freshwater continuous chronic criterion for aquatic organisms. Concentrations of PCBs in white sucker (fillets and whole fish) were all greater than 2,000 ng/g wet wt, the U.S. Environmental Protection Agency's guideline for safe consumption of fish: PCB concentrations measured in fish-tissue samples collected from the Tileston and Hollingsworth and Walter Baker Impoundments were 3,490 and 2,450 ng/g wet wt (filleted) and 6,890 and 4,080 ng/g wet wt (whole fish). Total PCB-congener concentrations measured in the whole bodies of estuarine bait fish (common mummichog) averaged 708 ng/g wet wt. PCBs that pass from the Neponset River to the Neponset River Estuary are either dissolved or associated with particulate matter (including living and nonliving material) suspended in the water column. A small proportion of PCBs may also be transported as part of the body burden of fish and wildlife. During the period May 13, 2005 to April 28, 2006, about 5,100 g (3.8 L or 1 gal) of PCBs were transported from the Neponset River to the Neponset River Estuary. Generally, about one-half of these PCBs were dissolved in the water column and the other half were associated with particulate matter; however, the proportion that was either dissolved or particulate varied seasonally. Most PCBs transported from the river to the estuary are composed of four or fewer chlorine atoms per biphenyl molecule. The data suggest that widespread PCB contamination of the lower Neponset River originated from Mother Brook, a Neponset River tributary, starting sometime around the early 1950s or earlier. In 1955, catastrophic dam failure caused by flooding likely released PCB-contaminated sediment downstream and into the Neponset River Estuary. PCBs from this source area likely continued to be released after the flood and during subsequent rebuilding of downstream dams. Today (2007), PCBs are mostly trapped behind these dams; however, some PCBs either diffuse or are entrained back into the water column and are transported downstream by river water into the estuary or volatilize into the atmosphere. In addition to the continuing release of PCBs from historically contaminated bottom sediment, PCBs are still (2007) originating from source areas along Mother and Meadow Brook as well as other sources along the river and Boston Harbor. PCBs from the river (transported by river water) and from the harbor (transported by tidal action) appear to have contaminated parts of the Neponset River Estuary.

Circadian rhythm of a red-tide dinoflagellate Peridinium quadridentatum in the port of Veracruz, Gulf of Mexico, its thecal morphology, nomenclature and geographical distribution.

PubMed

Okolodkov, Yuri B; Campos-Bautista, Guadalupe; Gárate-Lizárraga, Ismael

2016-07-15

A circadian rhythm of the dinoflagellate Peridinium quadridentatum was studied at a time-series station in the southwestern Gulf of Mexico, in May 2007. Different substrates (water column, the seagrass Thalassia testudinum, macroalgae, coral rubble and sandy sediment surface) were sampled at the site at 1.5-3.5m depth. In the samples of coral rubble, P. quadridentatum was scarce. In the water column, the species showed an abundance peak at 15:00. The cell abundance of P. quadridentatum in Thalassia samples increased from 15:00 until 18:00 (1.81×10(4)cells/gsubstratewet weight), and then continuously decreased until 06:00. Changes in P. quadridentatum cell abundance on macroalgae followed the same trend as on Thalassia, with the maximal value at 18:00. The higher abundance of P. quadridentatum (up to 1.40×10(4)cells/gSWW) in macroalgae samples showed the preference for seaweeds. P. quadridentatum has a neritic tropical-boreal distribution. A new combination is proposed: Peridinium quadridentatum var. trispiniferum. Copyright © 2016 Elsevier Ltd. All rights reserved.

3D-Printing for Analytical Ultracentrifugation

PubMed Central

Desai, Abhiksha; Krynitsky, Jonathan; Pohida, Thomas J.; Zhao, Huaying

2016-01-01

Analytical ultracentrifugation (AUC) is a classical technique of physical biochemistry providing information on size, shape, and interactions of macromolecules from the analysis of their migration in centrifugal fields while free in solution. A key mechanical element in AUC is the centerpiece, a component of the sample cell assembly that is mounted between the optical windows to allow imaging and to seal the sample solution column against high vacuum while exposed to gravitational forces in excess of 300,000 g. For sedimentation velocity it needs to be precisely sector-shaped to allow unimpeded radial macromolecular migration. During the history of AUC a great variety of centerpiece designs have been developed for different types of experiments. Here, we report that centerpieces can now be readily fabricated by 3D printing at low cost, from a variety of materials, and with customized designs. The new centerpieces can exhibit sufficient mechanical stability to withstand the gravitational forces at the highest rotor speeds and be sufficiently precise for sedimentation equilibrium and sedimentation velocity experiments. Sedimentation velocity experiments with bovine serum albumin as a reference molecule in 3D printed centerpieces with standard double-sector design result in sedimentation boundaries virtually indistinguishable from those in commercial double-sector epoxy centerpieces, with sedimentation coefficients well within the range of published values. The statistical error of the measurement is slightly above that obtained with commercial epoxy, but still below 1%. Facilitated by modern open-source design and fabrication paradigms, we believe 3D printed centerpieces and AUC accessories can spawn a variety of improvements in AUC experimental design, efficiency and resource allocation. PMID:27525659

Spatial Heterogeneity of Ice Cover Sediment and Thickness and Its Effects on Photosynthetically Active Radiation and Chlorophyll-a Distribution: Lake Bonney, Antarctica

NASA Astrophysics Data System (ADS)

Obryk, M.; Doran, P. T.; Priscu, J. C.; Morgan-Kiss, R. M.; Siebenaler, A. G.

2012-12-01

The perennially ice-covered lakes in the McMurdo Dry Valleys, Antarctica have been extensively studied under the Long Term Ecological Research project. But sampling has been spatially restricted due to the logistical difficulty of penetrating the 3-6 m of ice cover. The ice covers restrict wind-driven turbulence and its associated mixing of water, resulting in a unique thermal stratification and a strong vertical gradient of salinity. The permanent ice covers also shade the underlying water column, which, in turn, controls photosynthesis. Here, we present results of a three-dimensional record of lake processes obtained with an autonomous underwater vehicle (AUV). The AUV was deployed at West Lake Bonney, located in Taylor Valley, Dry Valleys, to further understand biogeochemical and physical properties of the Dry Valley lakes. The AUV was equipped with depth, conductivity, temperature, under water photosynthetically active radiation (PAR), turbidity, chlorophyll-and-DOM fluorescence, pH, and REDOX sensors. Measurements were taken over the course of two years in a 100 x 100 meter spaced horizontal sampling grid (and 0.2 m vertical resolution). In addition, the AUV measured ice thickness and collected 200 images looking up through the ice, which were used to quantify sediment distribution. Comparison with high-resolution satellite QuickBird imagery demonstrates a strong correlation between aerial sediment distribution and ice cover thickness. Our results are the first to show the spatial heterogeneity of lacustrine ecosystems in the McMurdo Dry Valleys, significantly improving our understanding of lake processes. Surface sediment is responsible for localized thinning of ice cover due to absorption of solar radiation, which in turn increases total available PAR in the water column. Higher PAR values are negatively correlated with chlorophyll-a, presenting a paradox; historically, long-term studies of PAR and chlorophyll-a have shown positive trends. We hypothesized that this paradox is a result of short-term photoadaptation of phytoplanktonic communities to spatial and temporal variations of PAR within the water column. To test this hypothesis, we established phytoplankton enrichment cultures from depths of maximum primary production (13 m) and tested whether dry valley lake phytoplankton respond to daily variations in controlled light environment. Laboratory-grown cultures exhibited a strong response at 12 hr:12 hr day:night cycle at the level of both photochemistry and chlorophyll biosynthesis, indicating that Lake Bonney possess the ability to quickly respond to changes in their light environment.

The response of excess 230Th and extraterrestrial 3He to sediment redistribution at the Blake Ridge, western North Atlantic

NASA Astrophysics Data System (ADS)

McGee, David; Marcantonio, Franco; McManus, Jerry F.; Winckler, Gisela

2010-10-01

The constant-flux proxies excess 230Th ( 230Th xs) and extraterrestrial 3He ( 3He ET) are commonly used to calculate sedimentary mass accumulation rates and to quantify lateral advection of sediment at core sites. In settings with significant lateral input or removal of sediment, these calculations depend on the assumption that concentrations of 230Th xs and 3He ET are the same in both advected sediment and sediment falling through the water column above the core site. Sediment redistribution is known to fractionate grain sizes, preferentially transporting fine grains; though relatively few studies have examined the grain size distribution of 230Th xs and 3He ET, presently available data indicate that both are concentrated in fine grains, suggesting that fractionation during advection may bias accumulation rate and lateral advection estimates based on these proxies. In this study, we evaluate the behavior of 230Th xs and 3He ET in Holocene and last glacial samples from two cores from the Blake Ridge, a drift deposit in the western North Atlantic. At the end of the last glacial period, both cores received large amounts of laterally transported sediment enriched in fine-grained material. We find that accumulation rates calculated by normalization to 230Th and 3He are internally consistent despite large spatial and temporal differences in sediment advection. Our analyses of grain size fractions indicate that ~ 70% of 3He ET-bearing grains are in the < 20 μm fraction, with roughly equal amounts in the < 4 and 4-20 μm fractions. 230Th xs is concentrated in <4-μm grains relative to 4- to 20-μm grains by approximately a factor of 2 in Holocene samples and by a much larger factor (averaging a factor of 10) in glacial samples. Despite these enrichments of both constant-flux proxies in fine particles, the fidelity of 230Th- and 3He-based accumulation rate estimates appears to be preserved even in settings with extreme sediment redistribution, perhaps due to the cohesive behavior of fine particles in marine settings.

Temporal and spatial distributions of contaminants in sediments of Santa Monica Bay, California

USGS Publications Warehouse

Bay, S.M.; Zeng, E.Y.; Lorenson, T.D.; Tran, K.; Alexander, Corrine

2003-01-01

Contaminant inputs from wastewater discharge, a major source of contamination to Santa Monica Bay (SMB), have declined drastically during the last three decades as a result of improved treatment processes and better source control. To assess the concomitant temporal changes in the SMB sediments, a study was initiated in June 1997, in which 25 box cores were collected using a stratified random sampling design. Five sediment strata corresponding to the time intervals of 1890-1920, 1932-1963, 1965-1979, 1979-1989, and 1989-1997 were identified using 210Pb dating techniques. Samples from each stratum were analyzed for metals, 1,1,1-Trichloro-2,2-bis(p-chlorophenyl)ethane (DDT) and its metabolites (DDTs), polychlorinated biphenyls (PCBs), and total organic carbon (TOC). Samples from the 1965-1979, 1979-1989, and 1989-1997 strata were also analyzed for polycyclic aromatic hydrocarbons (PAHs) and linear alkylbenzenes (LABs). Sediment metal concentrations increased from 1890-1979 and were similar during the time intervals of 1965-1979, 1979-1989, and 1989-1997, although the mass emissions of trace metals from sewage inputs declined substantially during the same time period. Trace organic contamination in SMB was generally highest in sediments corresponding to deposition during the years of 1965-1979 or 1979-1989 and showed a decline in concentration in the 1989-1997 stratum. Temporal trends of contamination were greatest in sediments collected from areas near the Hyperion Treatment Plant (HTP) outfall system and on the slope of Redondo Canyon. The highest contaminant concentrations were present in sediments near the HTP 7-mile outfall in the 1965-1979 stratum. Elevated trace metal and organic concentrations were still present in the 1989-1997 stratum of most stations, suggesting that sediment contaminants have moved vertically in the sediment column since sludge discharges from the 7-mile outfall (a dominant source of contamination to the bay) ceased in 1987. The widespread distributions of DDTs and PCBs in SMB and highly confined distribution of LABs around the HTP outfall system were indicative of a dispersal mechanism remobilizing historically deposited contaminants to areas relatively remote from the point of discharge. ?? 2003 Elsevier Science Ltd. All rights reserved.

Characterizing relationships among fecal indicator bacteria ...

EPA Pesticide Factsheets

Bed sediments of streams and rivers may store high concentrations of fecal indicator bacteria (FIB) and pathogens. Due to resuspension events, these contaminants can be mobilized into the water column and affect overall water quality. Other bacterial indicators such as microbial source tracking (MST) markers, developed to determine potential sources of fecal contamination, can also be resuspended from bed sediments. The primary objective of this study was to predict occurrence of waterborne pathogens in water and streambed sediments using a simple statistical model that includes traditionally measured FIB, environmental parameters and source allocation, using MST markers as predictor variables. Synoptic sampling events were conducted during baseflow conditions downstream from agricultural (AG), forested (FORS), and wastewater pollution control plant (WPCP) land uses. Concentrations of FIB and MST markers were measured in water and sediments, along with occurrences of the enteric pathogens Campylobacter, Listeria and Salmonella, and the virulence gene that carries Shiga toxin, stx2. Pathogens were detected in water more often than in underlying sediments. Shiga toxin was significantly related to land use, with concentrations of the ruminant marker selected as an independent variable that could correctly classify 76% and 64% of observed Shiga toxin occurrences in water and sediment, respectively. FIB concentrations and water quality parameters were also selected a

Observations of transitional tidal boundary layers and their impact on sediment transport in the Great Bay, NH

NASA Astrophysics Data System (ADS)

Koetje, K. M.; Foster, D. L.; Lippmann, T. C.

2017-12-01

Observations of the vertical structure of tidal flows obtained in 2016 and 2017 in the Great Bay Estuary, NH show evidence of transitional tidal boundary layers at deployment locations on shallow mudflats. High-resolution bottom boundary layer currents, hydrography, turbidity, and bed characteristics were observed with an acoustic Doppler current profiler (ADCP), an acoustic Doppler velocimeter (ADV), conductivity-depth-temperature (CTD) sensors, optical backscatter sensors, multibeam bathymetric surveys, and sediment grab samples and cores. Over the 2.5 m tidal range and at water depths ranging from 0.3 m to 1.5 m at mean lower low water, peak flows ranged from 10 cm/s to 30 cm/s and were primarily driven by the tides. A downward-looking ADCP captured the velocity profile over the lowest 1 m of the water column. Results consistently show a dual-log layer system, with evidence of a lower layer within 15 cm of the bed, another layer above approximately 30 cm from the bed, and a transitional region where the flow field rotates between that the two layers that can be as much as 180 degrees out of phase. CTD casts collected over a complete tidal cycle suggest that the weak thermohaline stratification is not responsible for development of the two layers. On the other hand, acoustic and optical backscatter measurements show spatial and temporal variability in suspended sediments that are dependant on tidal phase. Current work includes an examination of the relationship between sediment concentrations in the water column and velocity profile characteristics, along with an effort to quantify the impact of rotation and dual-log layers on bed stress.

Influence of wave action on the partitioning and transport of unattached and floc-associated bacteria in fresh water.

PubMed

Sousa, Andrew J; Droppo, Ian G; Liss, Steven N; Warren, Lesley; Wolfaardt, Gideon

2015-08-01

The dynamic interaction of bacteria within bed sediment and suspended sediment (i.e., floc) in a wave-dominated beach environment was assessed using a laboratory wave flume. The influence of shear stress (wave energy) on bacterial concentrations and on the partitioning and transport of unattached and floc-associated bacteria was investigated. The study showed that increasing wave energy (0.60 and 5.35 N/s) resulted in a 0.5 to 1.5 log increase in unattached cells of the test bacterium Pseudomonas sp. strain CTO7::gfp-2 in the water column. There was a positive correlation between the bacterial concentrations in water and the total suspended solids, with the latter increasing from values of near 0 to up to 200 mg/L over the same wave energy increase. The median equivalent spherical diameter of flocs in suspension also increased by an order of magnitude in all experimental trials. Under both low (0.60 N/s) and high (5.35 N/s) energy regime, bacteria were shown to preferentially associate with flocs upon cessation of wave activity. The results suggest that collecting water samples during periods of low wave action for the purpose of monitoring the microbiological quality of water may underestimate bacterial concentrations partly because of an inability to account for the effect of shear stress on the erosion and mobilization of bacteria from bed sediment to the water column. This highlights the need to develop a more comprehensive beach analysis strategy that not only addresses presently uncharacterized shores and sediments but also recognizes the importance of eroded flocs as a vector for the transport of bacteria in aquatic environments.

Investigations of the geochemistry of the rare earth elements in the exogenic cycle

DOE Office of Scientific and Technical Information (OSTI.GOV)

Olivarez, A.M.

1989-01-01

This study investigates the REE geochemistry of three common sediment types (hydrothermal, eolian, and benthic layers) in order to understand their role in the exogenic cycle. The impact of seafloor hydrothermal activity upon the REE content of seawater was investigated by comparing REE/Fe ratios of hydrothermal sediments with end-member plume values. Hydrothermal activity results in a net depletion in REE's from seawater, primarily due to the large scavenging capacity of iron oxyhydroxides which precipitate from these solutions. The discrepancy between the predicted (positive) versus observed (negative) Eu anomaly of seawater was investigated by calculating REE scavenging indices for DSDP Sitemore » 598 hydrothermal precipitates is proportional to REE concentration in the fluid phase. The REE content of Lake Superior benthic layers are dominated by lithogenous sources, with minor contributions from the water column. The mechanism of REE removal from the water column may involve scavenging by Fe-rich phases. The eolian dust component of Pacific sediments is derived from two sources: the continental crust and oceanic crust, probably ash from circum-Pacific volcanism. The relative amount of the two end-members influences the median grain size. An eolian flux maximum exists between 35{degree}N and 42{degree}N in the northwest Pacific. This region also receives more eolian materials during glacial versus interglacial stages. A comparison of chemically treated versus untreated loess samples suggests that eolian dust is not a significant source of dissolved REE's to the oceans.« less

EFFECTS OF ACIDIC PRECIPITATION ON BENTHOS

EPA Science Inventory

The community of organisms, the benthos, which inhabit aquatic sediments interact with biological and chemical components of the water column by processing detritus, recycling inorganic nutrients, mixing sediments, and serving as a principal food source for fish, waterfowl, and r...

Pockmarks off Big Sur, California

USGS Publications Warehouse

Paull, C.; Ussler, W.; Maher, N.; Greene, H. Gary; Rehder, G.; Lorenson, T.; Lee, H.

2002-01-01

A pockmark field was discovered during EM-300 multi-beam bathymetric surveys on the lower continental slope off the Big Sur coast of California. The field contains ??? 1500 pockmarks which are between 130 and 260 m in diameter, and typically are 8-12 m deep located within a 560 km2 area. To investigate the origin of these features, piston cores were collected from both the interior and the flanks of the pockmarks, and remotely operated vehicle observation (ROV) video and sampling transects were conducted which passed through 19 of the pockmarks. The water column within and above the pockmarks was sampled for methane concentration. Piston cores and ROV collected push cores show that the pockmark field is composed of monotonous fine silts and clays and the cores within the pockmarks are indistinguishable from those outside the pockmarks. No evidence for either sediment winnowing or diagenetic alteration suggestive of fluid venting was obtained. 14C measurements of the organic carbon in the sediments indicate continuous sedimentation throughout the time resolution of the radiocarbon technique ( ??? 45000 yr BP), with a sedimentation rate of ??? 10 cm per 1000 yr both within and between the pockmarks. Concentrations of methane, dissolved inorganic carbon, sulfate, chloride, and ammonium in pore water extracted from within the cores are generally similar in composition to seawater and show little change with depth, suggesting low biogeochemical activity. These pore water chemical gradients indicate that neither significant accumulations of gas are likely to exist in the shallow subsurface ( ??? 100 m) nor is active fluid advection occurring within the sampled sediments. Taken together the data indicate that these pockmarks are more than 45000 yr old, are presently inactive, and contain no indications of earlier fluid or gas venting events. ?? 2002 Elsevier Science B.V. All rights reserved.

Sedimentological Signatures of Transient Depositional Events in the Cariaco Basin, Venezuela

NASA Astrophysics Data System (ADS)

Elmore, A. C.; Thunell, R. C.; Black, D. E.; Murray, R. W.; Martinez, N. C.

2004-12-01

The varved sediments that have accumulated in the Cariaco Basin throughout the Holocene provide a detailed archive of the region's climatic history, and act as a historical record for the occurrence of phenomena such as earthquakes and coastal flooding. In this study we compare the sedimentological characteristics of lithogenic material collected from the water column during transient depositional events to those of normal hemipelagic sedimentation in the basin. Specifically, we have examined the clay mineralogy and grain size distribution of detrital material delivered to the basin by the July 9, 1997 earthquake near Cumana, Venezuela and the coastal flooding of Venezuela in late 1999. The sample material used in our study was collected as part of an ongoing sediment trap time series in the Cariaco Basin. The sedimentological signatures associated with these two events are distinctive from the typical lithogenic input to the basin. Preliminary data for biweekly samples collected from 1997-1999 shows a tri-modal particle size distribution, with peaks at 3, 22, and 80 im. However, material collected from the deep basin immediately following the 1997 earthquake is characterized by a particle diameter distribution at 6 and 22 im with a smaller than normal peak at 80 im; this variance suggests an alternate source of material was delivered to the basin via a turbidity flow induced by the earthquake. Supporting this theory, the clay mineralogy of the same sediment trap samples shows a higher than average ratio of kaolinite to quartz for sediments delivered to the basin following both the earthquake and flooding. We hope to extend the use of these sedimentological methods to identify past transient depositional events in Cariaco Basin cores.

SORPTION OF VINCLOZOLIN AND ATRAZINE ON FOUR GEOSORBENTS

EPA Science Inventory

The objectives of this study were to evaluate the magnitude and kinetics of vinclozolin and atrazine sorption on one surface soil and three freshwater sediments using batch and column techniques. Data from miscible displacement column studies were analyzed using a two-domain, fir...

Accumulation, Release, and Solubility of Arsenic, Molybdenum, and Vanadium in Wetland Sediments

USGS Publications Warehouse

Fox, P.M.; Doner, H.E.

2003-01-01

This study was undertaken to determine the fate of As, Mo, and V (trace elements, TEs) in the sediments of a constructed wetland in use for the remediation of potentially toxic trace element-contaminated agricultural drainwater. After three years of wetland operation, sediment cores were collected to determine changes in TE concentrations as a function of depth and the effects of varying water column depth. All TE concentrations were highest in the top 2 to 4 cm and decreased with depth. Molybdenum accumulated in the wetland sediments, up to levels of 32.5 ?? 4.6, 30.2 ?? 8.9, and 59.3 ?? 26.1 mg kg-1 in the top 1 cm of sediment at water depths of 15, 30, and 60 cm, respectively. In the top 2 cm of sediment, As accumulated (28.2 ?? 3.0 mg kg-1) only at the 60-cm water depth. Below 2 cm, as much as 10 mg kg-1 of As was lost from the sediment at all water depths. In most cases, V concentrations decreased in the sediment. In this wetland system, the lowest redox potentials were found near the sediment surface and increased with depth. Thus, in general As, Mo, and V concentrations in the sediment were highest under more reducing conditions and lowest under more oxidizing conditions. Most of the accumulated Mo (73%) became water soluble on drying of samples. This has important implications for systems undergoing changes in redox status; for instance, if these wetland sediments are dried, potentially large amounts of Mo may be solubilized.

Methanogenesis in the sediment of the acidic Lake Caviahue in Argentina

NASA Astrophysics Data System (ADS)

Koschorreck, Matthias; Wendt-Potthoff, Katrin; Scharf, Burkhard; Richnow, Hans H.

2008-12-01

The biogeochemistry of methane in the sediments of Lake Caviahue was examined by geochemical analysis, microbial activity assays and isotopic analysis. The pH in the water column was 2.6 and increased up to a pH of 6 in the deeper sediment pore waters. The carbon isotope composition of CH 4 was between - 65 and - 70‰ which is indicative for the biological origin of the methane. The enrichment factor ɛ increased from - 46‰ in the upper sediment column to more than - 80 in the deeper sediment section suggesting a transition from acetoclastic methanogenesis to CO 2 reduction with depth. In the most acidic surface layer of the sediment (pH < 4) methanogenesis is inhibited as suggested by a linear CH 4 concentration profile, activity assays and MPN analysis. The CH 4 activity assays and the CH 4 profile indicate that methanogenesis in the sediment of Lake Caviahue was active below 40 cm depth. At that depth the pH was above 4 and sulfate reduction was sulfate limited. Methane was diffusing with a flux of 0.9 mmol m - 2 d - 1 to the sediment surface where it was probably oxidized. Methanogenesis contributed little to the sediments carbon budget and had no significant impact on lake water quality. The high biomass content of the sediment, which was probably caused by the last eruption of Copahue Volcano, supported high rates of sulfate reduction which probably raised the pH and created favorable conditions for methanogens in deeper sediment layers.

Freshwater mussel population status and habitat quality in the Clinch River, Virginia and Tennessee, USA: a featured collection

USGS Publications Warehouse

Zipper, Carl E.; Beaty, Braven; Johnson, Gregory C.; Jones, Jess W.; Krstolic, Jennifer Lynn; Ostby, Brett J.K.; Wolfe, William J.; Donovan, Patricia

2014-01-01

The Clinch River of southwestern Virginia and northeastern Tennessee is arguably the most important river for freshwater mussel conservation in the United States. This featured collection presents investigations of mussel population status and habitat quality in the Clinch River. Analyses of historic water- and sediment-quality data suggest that water column ammonia and water column and sediment metals, including Cu and Zn, may have contributed historically to declining densities and extirpations of mussels in the river's Virginia sections. These studies also reveal increasing temporal trends for dissolved solids concentrations throughout much of the river's extent. Current mussel abundance patterns do not correspond spatially with physical habitat quality, but they do correspond with specific conductance, dissolved major ions, and water column metals, suggesting these and/or associated constituents as factors contributing to mussel declines. Mussels are sensitive to metals. Native mussels and hatchery-raised mussels held in cages in situ accumulated metals in their body tissues in river sections where mussels are declining. Organic compound and bed-sediment contaminant analyses did not reveal spatial correspondences with mussel status metrics, although potentially toxic levels were found. Collectively, these studies identify major ions and metals as water- and sediment-quality concerns for mussel conservation in the Clinch River.

A new method for mapping variability in vertical seepage flux in streambeds

NASA Astrophysics Data System (ADS)

Chen, Xunhong; Song, Jinxi; Cheng, Cheng; Wang, Deming; Lackey, Susan O.

2009-05-01

A two-step approach was used to measure the flux across the water-sediment interface in river channels. A hollow tube was pressed into the streambed and an in situ sediment column of the streambed was created inside the tube. The hydraulic gradient between the two ends of the sediment column was measured. The vertical hydraulic conductivity of the sediment column was determined using a falling-head permeameter test in the river. Given the availability of the hydraulic gradient and vertical hydraulic conductivity of the streambed, Darcy’s law was used to calculate the specific discharge. This approach was applied to the Elkhorn River and one tributary in northeastern Nebraska, USA. The results suggest that the magnitude of the vertical flux varied greatly within a short distance. Furthermore, the flux can change direction from downward to upward between two locations only several meters apart. This spatial pattern of variation probably represents the inflow and outflow within the hyporheic zone, not the regional ambient flow systems. In this study, a thermal infrared camera was also used to detect the discharge locations of groundwater in the streambed. After the hydraulic gradient and the vertical hydraulic conductivity were estimated from the groundwater spring, the discharge rate was calculated.

Diverse molecular signatures for ribosomally ‘active’ Perkinsea in marine sediments

PubMed Central

2014-01-01

Background Perkinsea are a parasitic lineage within the eukaryotic superphylum Alveolata. Recent studies making use of environmental small sub-unit ribosomal RNA gene (SSU rDNA) sequencing methodologies have detected a significant diversity and abundance of Perkinsea-like phylotypes in freshwater environments. In contrast only a few Perkinsea environmental sequences have been retrieved from marine samples and only two groups of Perkinsea have been cultured and morphologically described and these are parasites of marine molluscs or marine protists. These two marine groups form separate and distantly related phylogenetic clusters, composed of closely related lineages on SSU rDNA trees. Here, we test the hypothesis that Perkinsea are a hitherto under-sampled group in marine environments. Using 454 diversity ‘tag’ sequencing we investigate the diversity and distribution of these protists in marine sediments and water column samples taken from the Deep Chlorophyll Maximum (DCM) and sub-surface using both DNA and RNA as the source template and sampling four European offshore locations. Results We detected the presence of 265 sequences branching with known Perkinsea, the majority of them recovered from marine sediments. Moreover, 27% of these sequences were sampled from RNA derived cDNA libraries. Phylogenetic analyses classify a large proportion of these sequences into 38 cluster groups (including 30 novel marine cluster groups), which share less than 97% sequence similarity suggesting this diversity encompasses a range of biologically and ecologically distinct organisms. Conclusions These results demonstrate that the Perkinsea lineage is considerably more diverse than previously detected in marine environments. This wide diversity of Perkinsea-like protists is largely retrieved in marine sediment with a significant proportion detected in RNA derived libraries suggesting this diversity represents ribosomally ‘active’ and intact cells. Given the phylogenetic range of hosts infected by known Perkinsea parasites, these data suggest that Perkinsea either play a significant but hitherto unrecognized role as parasites in marine sediments and/or members of this group are present in the marine sediment possibly as part of the ‘seed bank’ microbial community. PMID:24779375

Chemical Data for Detailed Studies of Irrigation Drainage in the Salton Sea Area, California, 1995?2001

USGS Publications Warehouse

Schroeder, Roy A.

2004-01-01

The primary purpose of this report is to present all chemical data from the Salton Sea area collected by the U.S. Geological Survey between 1995 and 2001. The data were collected primarily for the Department of the Interior's National Irrigation Water Quality Program (NIWQP). The report also contains a brief summary and citation to investigations done for the NIWQP between 1992 and 1995. The NIWQP began studies in the Salton Sea area in 1986 to evaluate effects on the environment from potential toxins, especially selenium, in irrigation-induced drainage. This data report is a companion to several reports published from the earlier studies and to interpretive publications that make use of historical and recent data from this area. Data reported herein are from five collection studies. Water, bottom material, and suspended sediment collected in 1995-96 from the New River, the lower Colorado River, and the All-American Canal were analyzed for elements, semi-volatile (extractable) organic compounds, and organochlorine compounds. Sufficient suspended sediment for chemical analyses was obtained by tangential-flow filtration. A grab sample of surficial bottom sediment collected from near the deepest part of the Salton Sea in 1996 was analyzed for 44 elements and organic and inorganic carbon. High selenium concentration confirmed the effective transfer (sequestration) of selenium into the bottom sediment. Similar grab samples were collected 2 years later (1998) from 11 locations in the Salton Sea and analyzed for elements, as before, and also for nutrients, organochlorine compounds, and polycyclic aromatic hydrocarbons. Nutrients were measured in bottom water, and water-column profiles were obtained for pH, conductance, temperature, and dissolved oxygen. Element and nutrient concentrations were obtained in 1999 from cores at 2 of the above 11 sites, in the north subbasin of the Salton Sea. The most-recent study reported herein was done in 2001 and contains element data on suspended material isolated by continuous-flow centrifugation on samples collected in transects extending out from the Whitewater, the Alamo, and the New Rivers into the Salton Sea. Chemical data on suspended sediment and bottom material from tributory rivers and the Salton Sea itself show that many insoluble constituents, including selenium and DDE, are concentrated in the fine-grained, organic- and carbonate-rich bottom sediment from deep areas near the center of the Salton Sea. Data also show that selenium and arsenic are markedly enriched in seston (plankton, partially-degraded algal detritus, and mineral matter that compose suspended particulates in the lake) collected just below the water surface in the Salton Sea. This result indicates that bio-concentration in primary producers in the water column provides an important pathway whereby high selenium residues accumulate in fish and fish-eating birds at the Salton Sea.

Natural Attenuation in Streambed Sediment Receiving Chlorinated Solvents from Underlying Fracture Networks

DOE PAGES

Şimşir, Burcu; Yan, Jun; Im, Jeongdae; ...

2017-03-22

Contaminant discharge from fractured bedrock formations remains a remediation challenge. Here, we applied an integrated approach to assess the natural attenuation potential of sediment that forms the transition zone between upwelling groundwater from a chlorinated solvent-contaminated fractured bedrock aquifer and the receiving surface water. In situ measurements demonstrated that reductive dechlorination in the sediment attenuated chlorinated compounds before reaching the water column. Microcosms established with creek sediment or in situ incubated Bio-Sep beads degraded C 1-C 3 chlorinated solvents to less-chlorinated or innocuous products. Quantitative PCR and 16S rRNA gene amplicon sequencing revealed the abundance and spatial distribution of knownmore » dechlorinator biomarker genes within the creek sediment and demonstrated that multiple dechlorinator populations degrading chlorinatedC 1-C 3 alkanes and alkenes co-inhabit the sediment. Phylogenetic classification of bacterial and archaeal sequences indicated a relatively uniform distribution over spatial (300 m horizontally) scale, but Dehalococcoides and Dehalobacter were more abundant in deeper sediment, where 5.7 ± 0.4 × 10 5 and 5.4 ± 0.9 × 10 6 16S rRNA gene copies per g of sediment, respectively, were measured. The microbiological and hydrogeological characterization demonstrated that microbial processes at the fractured bedrock-sediment interface were crucial for preventing contaminants reaching the water column, emphasizing the relevance of this critical zone environment for contaminant attenuation.« less

Natural Attenuation in Streambed Sediment Receiving Chlorinated Solvents from Underlying Fracture Networks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Şimşir, Burcu; Yan, Jun; Im, Jeongdae

Contaminant discharge from fractured bedrock formations remains a remediation challenge. Here, we applied an integrated approach to assess the natural attenuation potential of sediment that forms the transition zone between upwelling groundwater from a chlorinated solvent-contaminated fractured bedrock aquifer and the receiving surface water. In situ measurements demonstrated that reductive dechlorination in the sediment attenuated chlorinated compounds before reaching the water column. Microcosms established with creek sediment or in situ incubated Bio-Sep beads degraded C 1-C 3 chlorinated solvents to less-chlorinated or innocuous products. Quantitative PCR and 16S rRNA gene amplicon sequencing revealed the abundance and spatial distribution of knownmore » dechlorinator biomarker genes within the creek sediment and demonstrated that multiple dechlorinator populations degrading chlorinatedC 1-C 3 alkanes and alkenes co-inhabit the sediment. Phylogenetic classification of bacterial and archaeal sequences indicated a relatively uniform distribution over spatial (300 m horizontally) scale, but Dehalococcoides and Dehalobacter were more abundant in deeper sediment, where 5.7 ± 0.4 × 10 5 and 5.4 ± 0.9 × 10 6 16S rRNA gene copies per g of sediment, respectively, were measured. The microbiological and hydrogeological characterization demonstrated that microbial processes at the fractured bedrock-sediment interface were crucial for preventing contaminants reaching the water column, emphasizing the relevance of this critical zone environment for contaminant attenuation.« less

Hydrocarbon composition and concentrations in the Gulf of Mexico sediments in the 3 years following the Macondo well blowout.

PubMed

Babcock-Adams, Lydia; Chanton, Jeffrey P; Joye, Samantha B; Medeiros, Patricia M

2017-10-01

In April of 2010, the Macondo well blowout in the northern Gulf of Mexico resulted in an unprecedented release of oil into the water column at a depth of approximately 1500 m. A time series of surface and subsurface sediment samples were collected to the northwest of the well from 2010 to 2013 for molecular biomarker and bulk carbon isotopic analyses. While no clear trend was observed in subsurface sediments, surface sediments (0-3 cm) showed a clear pattern with total concentrations of n-alkanes, unresolved complex mixture (UCM), and petroleum biomarkers (terpanes, hopanes, steranes) increasing from May to September 2010, peaking in late November 2010, and strongly decreasing in the subsequent years. The peak in hydrocarbon concentrations were corroborated by higher organic carbon contents, more depleted Δ 14 C values and biomarker ratios similar to those of the initial MC252 crude oil reported in the literature. These results indicate that at least part of oil discharged from the accident sedimented to the seafloor in subsequent months, resulting in an apparent accumulation of hydrocarbons on the seabed by the end of 2010. Sediment resuspension and transport or biodegradation may account for the decrease in sedimented oil quantities in the years following the Macondo well spill. Copyright © 2017 Elsevier Ltd. All rights reserved.

Enantiomer fractions of polychlorinated biphenyls in three selected Standard Reference Materials.

PubMed

Morrissey, Joshua A; Bleackley, Derek S; Warner, Nicholas A; Wong, Charles S

2007-01-01

The enantiomer composition of six chiral polychlorinated biphenyls (PCBs) were measured in three different certified Standard Reference Materials (SRMs) from the US National Institute of Standards and Technology (NIST): SRM 1946 (Lake Superior fish tissue), SRM 1939a (PCB Congeners in Hudson River Sediment), and SRM 2978 (organic contaminants in mussel tissue--Raritan Bay, New Jersey) to aid in quality assurance/quality control methodologies in the study of chiral pollutants in sediments and biota. Enantiomer fractions (EFs) of PCBs 91, 95, 136, 149, 174, and 183 were measured using a suite of chiral columns by gas chromatography/mass spectrometry. Concentrations of target analytes were in agreement with certified values. Target analyte EFs in reference materials were measured precisely (<2% relative standard deviation), indicating the utility of SRM in quality assurance/control methodologies for analyses of chiral compounds in environmental samples. Measured EFs were also in agreement with previously published analyses of similar samples, indicating that similar enantioselective processes were taking place in these environmental matrices.

Ecotoxicological assessment of bluegill sunfish inhabiting a selenium-enriched fly ash stream

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reash, R.J.; Lohner, T.W.; Wood, K.V.

1999-07-01

Little Scary Creek (LSC), a 2nd-order tributary of the Kanawha River in West Virginia, receives treated fly ash produced during coal combustion. Selenium and other trace metals were determined in water column and sediment samples, caddisflies, and bluegill sunfish liver and gonads during 1995--96 to estimate pathways of selenium exposure and assess the likelihood of toxic effects. Selenium levels in LSC water and sediment samples, and in caddisflies were elevated compared to reference sites. Mean dry weight selenium concentrations in bluegill liver, ovary, and tested tissue equaled or exceeded published toxic thresholds. Other trace metals were significantly higher in LSCmore » bluegill. Leukopenia, elevated serum salts, and lowered liver weight were found in LSC bluegill. Fewer older bluegill were found in LSC. Sunfish in LSC are experiencing various kinds of sublethal stress, presumably due to metals exposure. However, major toxic effects that would be predicted to occur based on tissue selenium levels (complete reproductive failure or mortality) have not been observed in this population.« less

Distribution of trace metals in the vicinity of a wastewater treatment plant on the Potomac River, Washington, DC, USA

NASA Astrophysics Data System (ADS)

Smith, J. P.; Muller, A. C.

2013-05-01

Predicting the fate and distribution of anthropogenic-sourced trace metals in riverine and estuarine systems is challenging due to multiple and varying source functions and dynamic physiochemical conditions. Between July 2011 and November 2012, sediment and water column samples were collected from over 20 sites in the tidal-fresh Potomac River estuary, Washington, DC near the outfall of the Blue Plains Advanced Wastewater Treatment Plant (BPWTP) for measurement of select trace metals. Field observations of water column parameters (conductivity, temperature, pH, turbidity) were also made at each sampling site. Trace metal concentrations were normalized to the "background" composition of the river determined from control sites in order to investigate the distribution BPWTP-sourced in local Potomac River receiving waters. Temporal differences in the observed distribution of trace metals were attributed to changes in the relative contribution of metals from different sources (wastewater, riverine, other) coupled with differences in the physiochemical conditions of the water column. Results show that normalizing near-source concentrations to the background composition of the water body and also to key environmental parameters can aid in predicting the fate and distribution of anthropogenic-sourced trace metals in dynamic riverine and estuarine systems like the tidal-fresh Potomac River.

Planktonic Foraminifera Proxies Calibration Off the NW Iberian Margin: Nutrients Approach

NASA Astrophysics Data System (ADS)

Salgueiro, E.; Castro, C. G.; Zuniga, D.; Martin, P. A.; Groeneveld, J.; de la Granda, F.; Villaceiros-Robineau, N.; Alonso-Perez, F.; Alberto, A.; Rodrigues, T.; Rufino, M. M.; Abrantes, F. F. G.; Voelker, A. H. L.

2014-12-01

Planktonic foraminifera (PF) shells preserved in marine sediments are a useful tool to reconstruct productivity conditions at different geological timescales. However, the accuracy of these paleoreconstructions depends on the data set and calibration quality. Several calibration works have been defining and improving the use of proxies for productivity and nutrient cycling parameters. Our contribution is centred on a multi-proxy calibration at a regional coastal upwelling system. To minimize the existing uncertainties affecting the use of trace elements and C stable isotopes as productivity proxy in the high productivity upwelling areas, we investigate the content and distribution of Ba/Ca and δ13C in the water column, its transference into the planktonic foraminifera shells, and, how the living planktonic foraminifera Ba/Ca and δ13C signal is related to the same planktonic foraminiferal species preserved in the sediment record. This study is based on a large data set from two stations (RAIA - 75m water depth, and CALIBERIA - 350m water depth) located off the NW Iberian margin (41.5-42.5ºN; 9-10ºW), and includes: i) two year monthly water column data (temperature, salinity, nutrients, chlorophyll a, Ba/Ca, and δ13C-DIC); ii) seasonal Ba/Ca, δ13C in several living PF species at both stations; and iii) Ba/Ca and δ13C in several PF species from a large set of core-top sediment samples in the study region. Additionally, total organic carbon and total alkenones were also measured in the sediment. Our results showed the link between productivity proxies in the surface sediment foraminifera assemblage and the processes regulating the actual phytoplankton dynamics in an upwelling area. The understanding of this relationship has special relevance since it gives fundamental information related to the past oceanic biogeochemistry and/or climate and improves the prevision of future changes against possible climate variability due to anthropogenic forcing.

Distribution and seasonal dynamics of arsenic in a shallow lake in northwestern New Jersey, USA

USGS Publications Warehouse

Barringer, J.L.; Szabo, Z.; Wilson, T.P.; Bonin, J.L.; Kratzer, T.; Cenno, K.; Romagna, T.; Alebus, M.; Hirst, B.

2011-01-01

Elevated concentrations of arsenic (As) occurred during warm months in water from the outlet of Lake Mohawk in northwestern New Jersey. The shallow manmade lake is surrounded by residential development and used for recreation. Eutrophic conditions are addressed by alum and copper sulfate applications and aerators operating in the summer. In September 2005, arsenite was dominant in hypoxic to anoxic bottom water. Filterable As concentrations were about 1.6-2 times higher than those in the upper water column (23-25 ??g/L, mostly arsenate). Hypoxic/anoxic and near-neutral bottom conditions formed during the summer, but became more oxic and alkaline as winter approached. Acid-leachable As concentrations in lake-bed sediments ranged up to 694 mg/kg in highly organic material from the tops of sediment cores but were <15 mg/kg in geologic substrate. During warm months, reduced As from the sediment diffuses into the water column and is oxidized; mixing by aerators, wind, and boat traffic spreads arsenate and metals, some in particulate form, throughout the water column. Similar levels of As in sediments of lakes treated with arsenic pesticides indicate that most of the As in Lake Mohawk probably derives from past use of arsenical pesticides, although records of applications are lacking. The annual loss of As at the lake outlet is only about 0.01% of the As calculated to be in the sediments, indicating that elevated levels of As in the lake will persist for decades. ?? 2010 US Government.

Dinoflagellate Cyst Contribution to Settling Organic Matter in the Coastal Ocean

NASA Astrophysics Data System (ADS)

Bringue, M.; Thunell, R.; Pospelova, V.; Tappa, E.; Johannessen, S.; Macdonald, R. W.

2016-12-01

The coastal ocean hosts much of the global primary production, with an estimated 40% of carbon sequestration occurring along continental margins alone. This study characterizes the variability in organic-walled dinoflagellate cyst fluxes and assemblage composition during sedimentation through the water column, in the context of bulk organic and inorganic particulate matter export, in three different coastal settings: the Cariaco Basin (off Venezuela), the Santa Barbara Basin (Southern California) and the Strait of Georgia (western Canada). At each site, moorings of 2-5 sediment traps positioned at different depths collected settling particles over intervals of 7-14 days. The contribution of dinoflagellate cysts to particulate matter fluxes, and their fate as they are being exported to the seafloor, is investigated by comparing cyst fluxes and assemblages in samples collected simultaneously from discrete depths at each location. Preliminary results from the 1,400 m deep Cariaco Basin sediment trap time series indicate that dinoflagellate cyst fluxes during the upwelling season are high (average of 117,000 cyst m-2 day-1 in January-February 2006) and highly consistent between depths. The only notable exception is the record from the shallowest trap (Trap Z, 150 m bsl) which shows marked variations in cyst fluxes (from 7,700 to 240,000 cyst m-2 day-1) that are not reflected in the other four trap records. Dinoflagellate cyst assemblages from each interval along the five traps are statistically identical, indicating that cysts produced in the upper water column are rapidly transported to the seafloor, and that no selective degradation/preservation has altered the cyst assemblages within the water column. Excluding the Trap Z record, the ratio of dinoflagellate cyst to organic carbon fluxes shows an 35% increase from the top to bottom traps, suggesting a dinoflagellate cyst "enrichment" relative to other organic particles in settling material.

Application of passive sampling for measuring dissolved concentrations of organic contaminants in the water column at three marine superfund sites.

PubMed

Burgess, Robert M; Lohmann, Rainer; Schubauer-Berigan, Joseph P; Reitsma, Pamela; Perron, Monique M; Lefkovitz, Lisa; Cantwell, Mark G

2015-08-01

Currently, there is an effort under way to encourage remedial project managers at contaminated sites to use passive sampling to collect freely dissolved concentrations (Cfree ) of hydrophobic organic contaminants to improve site assessments. The objective of the present study was to evaluate the use of passive sampling for measuring water column Cfree for several hydrophobic organic contaminants at 3 US Environmental Protection Agency Superfund sites. Sites investigated included New Bedford Harbor (New Bedford, MA, USA), Palos Verdes Shelf (Los Angeles, CA, USA), and Naval Station Newport (Newport, RI, USA); and the passive samplers evaluated were polyethylene, polydimethylsiloxane-coated solid-phase microextraction fibers, semipermeable membrane devices, and polyoxymethylene. In general, the different passive samplers demonstrated good agreement, with Cfree values varying by a factor of 2 to 3. Further, at New Bedford Harbor, where conventional water sample concentrations were also measured (i.e., grab samples), passive sampler-based Cfree values agreed within a factor of 2. These findings suggest that all of the samplers were experiencing and measuring similar Cfree during their respective deployments. Also, at New Bedford Harbor, a strong log-linear, correlative, and predictive relationship was found between polyethylene passive sampler accumulation and lipid-normalized blue mussel bioaccumulation of polychlorinated biphenyls (r(2)  = 0.92, p < 0.05). The present study demonstrates the utility of passive sampling for generating scientifically accurate water column Cfree values, which is critical for making informed environmental management decisions at contaminated sediment sites. Published 2015 SETAC. This article is a US Government work and is in the public domain in the USA.

3D model of radionuclide dispersion in coastal areas with multifraction cohesive and non-cohesive sediments

NASA Astrophysics Data System (ADS)

Brovchenko, Igor; Maderich, Vladimir; Jung, Kyung Tae

2015-04-01

We developed new radionuclide dispersion model that may be used in coastal areas, rivers and estuaries with non-uniform distribution of suspended and bed sediments both cohesive and non-cohesive types. Model describes radionuclides concentration in dissolved phase in water column, particulated phase on suspended sediments on each sediment class types, bed sediments and pore water. The transfer of activity between the water column and the pore water in the upper layer of the bottom sediment is governed by diffusion processes. The phase exchange between dissolved and particulate radionuclides is written in terms of desorption rate a12 (s-1) and distribution coefficient Kd,iw and Kd,ib (m3/kg) for water column and for bottom deposit, respectively. Following (Periáñez et al., 1996) the dependence of distribution coefficients is inversely proportional to the sediment particle size. For simulation of 3D circulation, turbulent diffusion and wave fields a hydrostatic model SELFE (Roland et. al. 2010) that solves Reynolds-stress averaged Navier-Stokes (RANS) equations and Wave Action transport equation on the unstructured grids was used. Simulation of suspended sediment concentration and bed sediments composition is based on (L. Pinto et. al., 2012) approach that originally was developed for non-cohesive sediments. In present study we modified this approach to include possibility of simulating mixture of cohesive and non-cohesive sediments by implementing parameterizations for erosion and deposition fluxes for cohesive sediments and by implementing flocculation model for determining settling velocity of cohesive flocs. Model of sediment transport was calibrated on measurements in the Yellow Sea which is shallow tidal basin with strongly non-uniform distribution of suspended and bed sediments. Model of radionuclide dispersion was verified on measurements of 137Cs concentration in surface water and bed sediments after Fukushima Daiichi nuclear accident. References Periáñez, R. Abril, J.M., Garcia-Leon, M. (1996). Modelling the dispersion of non-conservative radionuclides in tidal waters'Part 1: conceptual and mathematical model. Journal of Environmental Radioactivity 31 (2), 127-141 Roland, A., Y. J. Zhang, H. V. Wang, Y. Meng, Y.-C. Teng, V. Maderich, I. Brovchenko, M. Dutour-Sikiric, and U. Zanke (2012), A fully coupled 3D wave-current interaction model on unstructured grids, J. Geophys. Res., 117, C00J33 Pinto L., Fortunato A.B., Zhang Y., Oliveira A., Sancho F.E.P. (2012) Development and validation of a three-dimensional morphodynamic modelling system for non-cohesive sediments, Ocean Modell., (57-58), 1-14

Effects of the Razor Clam Tagelus plebeius on the Fate of Petroleum Hydrocarbons: A Mesocosm Experiment.

PubMed

Klerks, P L; Kascak, A; Cazan, A M; Deb Adhikary, N; Chistoserdov, A; Shaik, A; Osman, S; Louka, F R

2018-02-22

The relationship between organisms and contaminants may be a two-way interaction: contaminants affecting the biota and the biota affecting the environmental fate and distribution of the contaminants. This may be especially so for sediment-dwelling organisms, because their burrowing and feeding can drastically influence sediment characteristics. The present study looked at the influence of the suspension-feeding stout razor clam Tagelus plebeius on the distribution of crude oil and pyrene in greenhouse mesocosm experiments. Water column turbidity and sediment redox also were monitored during the 15- to 30-day exposures to provide information on the influence of hydrocarbons and the razor clams on environmental conditions. For the experiment with crude oil, sediment was taken from the mesocosms at the end of the experiment, and the hydrocarbon-degradation potential was assessed in incubations with 14 C-naphthalene. The experiments used four treatments: hydrocarbons present/absent and razor clams present/absent. Hydrocarbon dosing levels were relatively low (1 mL of oil or 30 mg of pyrene per mesocosm with 22 L of natural sediment and 11 L of seawater). The presence of the razor clams resulted in hydrocarbon concentrations at the sediment surface being 25% lower than in mesocosms without clams. No consistent effects were noted for polycyclic aromatic hydrocarbon (PAH) concentrations in the water column or in subsurface sediment. The naphthalene-degradation potential was elevated for sediment from mesocosms dosed with oil, but the presence of the clams did not affect this potential. The presence of the razor clams resulted in a lowering of water column turbidity, but no effect on sediment redox. The hydrocarbon addition had no effect on turbidity, but sediment redox was lowered. While results show that the presence of the razor clams resulted in a loss of hydrocarbons from the surface sediment, the other results do not provide a clear picture of the underlying mechanisms and the fate of the PAHs lost from the sediment surface. We hypothesize that the loss of surface sediment PAHs was due to burial of surface sediment and possibly bioaccumulation by the clams. While additional research is needed for further insights into underlying mechanisms, the present work demonstrates that the presence of sediment-burrowing suspension feeders decreases hydrocarbon levels in surface sediment. This means that assessments of the impact of an oil spill should pay attention to effects on these organisms and to their influence on the fate and distribution of the spilled oil.

Ecosystem-level studies of terrestrial carbon reveal contrasting bacterial metabolism in different aquatic habitats.

PubMed

Attermeyer, Katrin; Premke, Katrin; Hornick, Thomas; Hilt, Sabine; Grossart, Hans-Peter

2013-12-01

In aquatic systems, terrestrial dissolved organic matter (t-DOM) is known to stimulate bacterial activities in the water column, but simultaneous effects of autumnal leaf input on water column and sediment microbial dynamics in littoral zones of lakes remain largely unknown. The study's objective was to determine the effects of leaf litter on bacterial metabolism in the littoral water and sediment, and subsequently, the consequences for carbon cycling and food web dynamics. Therefore, in late fall, we simultaneously measured water and sediment bacterial metabolism in the littoral zone of a temperate shallow lake after adding terrestrial particulate organic matter (t-POM), namely, maize leaves. To better evaluate bacterial production (BP) and community respiration (CR) in sediments, we incubated sediment cores with maize leaves of different quality (nonleached and leached) under controlled laboratory conditions. Additionally, to quantify the incorporated leaf carbon into microbial biomass, we determined carbon isotopic ratios of fatty acids from sediment and leaf-associated microbes from a laboratory experiment using 13C-enriched beech leaves. The concentrations of dissolved organic carbon (DOC) increased significantly in the lake after the addition of maize leaves, accompanied by a significant increase in water BP. In contrast, sediment BP declined after an initial peak, showing no positive response to t-POM addition. Sediment BP and CR were also not stimulated by t-POM in the laboratory experiment, either in short-term or in long-term incubations, except for a short increase in CR after 18 hours. However, this increase might have reflected the metabolism of leaf-associated microorganisms. We conclude that the leached t-DOM is actively incorporated into microbial biomass in the water column but that the settling leached t-POM (t-POML) does not enter the food web via sediment bacteria. Consequently, t-POML is either buried in the sediment or introduced into the aquatic food web via microorganisms (bacteria and fungi) directly associated with t-POM(L) and via benthic macroinvertebrates by shredding of t-POM(L). The latter pathway represents a "benthic shortcut" which efficiently transfers t-POM(L) to higher trophic levels.

Dynamics of CFCs in northern temperate lakes and adjacent groundwater

USGS Publications Warehouse

Walker, John F.; Saad, David A.; Hunt, Randall J.

2007-01-01

Three dimictic lakes and one meromictic lake in and near the Trout Lake, Wisconsin, watershed were sampled to determine the variation of chlorofluorocarbon (CFC) concentrations within the lakes. The lakes were sampled during stratified conditions, during fall turnover, and during ice cover. The results demonstrate a considerable variation in CFC concentrations and corresponding atmospheric mixing ratios in the lakes sampled, both with depth and season within a given lake, and across different lakes. CFC profiles and observed degradation were not related to the groundwater inflow rate and hence are likely the result of in‐lake processes influenced by CFC degradation in the (lake) water column, CFC degradation in the lake‐bed sediments, and gas exchange rates and the duration of turnover (turnover efficiency).

Heavy metals pollution status in surface sediments (rivers and artifical lakes, Serbia)

NASA Astrophysics Data System (ADS)

Sakan, Sanja; Đorđević, Dragana

2017-04-01

Potentially hazardous trace elements, often in literature referred as "heavy metals", are deemed serious pollutants due to their toxicity, persistence and non-degradability in the environment. These elements play an important role in extent of water pollution and threaten the health of populations and ecosystems. As the sink of heavy metals, sediment beds adsorb metals in quantities that are many times higher than those found in the water column in the long-term polluted water environment. It is believed that most of the metal content, as much as 90% in aquatic sediments is bound to sediments. Metal contamination in these sediments could be directly affect the river water quality, resulting in potential consequences to the sensitive lowest levels of the food chain and ultimately to human health. The objective of this research was the evaluation of heavy metal contamination level in sediments of the most important rivers and artificial lakes in Serbia. The heavy metal enrichment in studied sediments was conducted by using: determination of total metal content, sequential extraction procedure for the fractionation of studied elements, quantification of the metal enrichment degree in the sediments by calculating geo-accumulation indices, determination of actual and potential element availability and application of BRAI index for the assessment of heavy metal bioavailability. The sediments were found to be contaminated by heavy metals to various extents, mostly with Cd, Cu, and Zn. The significant variation in heavy metal distribution among samples collected in this large region, encompassing all Serbian watersheds, suggests the selective contamination of sediments by heavy metals. Elevated concentrations of elements in most cases were detected in samples of river sediments, since artificial lake reservoirs are usually built in rural areas, where the less anthropogenic pollution. Rivers often flow through the towns and these water basins less or more loaded micronutrients, toxic substances, organic or inorganic, waste materials, depending on the species and type of industrial processes that are often without the necessary technological and mandatory treatment directly discharged into them. Due to the potential risk of heavy metal pollution in studied sediments, pollution prevention and control measurements seems necessary, especially in areas where we found increased levels of these elements.

The occurrence and distribution of uronic acids and sugar methyl ethers in sediment trap materials and sediments of two coastal marine environments

NASA Astrophysics Data System (ADS)

Bergamaschi, Brian A.; Walters, Jeffrey S.; Hedges, John I.

1999-02-01

Although recent research has indicated that bacteria may contribute an important fraction of biochemical residues in terrestrial and marine environments, it is difficult for geochemists to identify contributions from these ubiquitous and biochemically diverse organisms. Previous studies have suggested uronic acids and O-methyl sugars may be useful indicators of microbial abundance and activity, but have been limited primarily to analyses of a small number of isolated samples. We report here comparative distributions of O-methyl sugars, uronic acids, and aldoses in sediment trap material and sediments from Dabob Bay, WA and nearby Saanich Inlet, BC, where temporal and spatial trends may be used together with well-established patterns in other biochemicals to identify bacterial contributions against the background of other carbohydrate sources. O-methyl sugars and uronic acids were important contributors to the overall flux and burial of polysaccharide material in Dabob Bay and Saanich Inlet, composing ≤12 wt% of the total carbohydrate yields from sediment trap and sediment samples. O-methyl sugars accounted for an average of 5% of the carbohydrate yields from sediment trap materials and sediments, but were found rarely and only in low abundance in vascular plant tissues, phytoplankton, and kelp. In contrast, uronic acids were abundant products of sediment trap material and sediments, as well as vascular plant tissues, where in some cases they predominated among all carbohydrates. Uronic acid abundance in sediment trap material averaged 3% and ranged to >6% of total carbohydrate yields. The persistence of total minor sugar yields in water column collections from Dabob Bay throughout the seasonal cycle indicated they had a primary source that was not directly related to plankton bloom cycles nor pulsed inputs of vascular plant remains. Subsurface maxima in total minor sugar yields (and several individual components) within sediment cores from both sites indicate in situ sedimentary sources. Taken together, the observed environmental distributions strongly suggest that the minor sugar abundances in Dabob Bay and Saanich Inlet were controlled by in situ microbial production.

Mobilization of natural colloids from an iron oxide-coated sand aquifer--Effect of pH and ionic strength

USGS Publications Warehouse

Bunn, Rebecca A.; Magelky, Robin D.; Ryan, Joseph N.; Elimelech, Menachem

2002-01-01

Field and laboratory column experiments were performed to assess the effect of elevated pH and reduced ionic strength on the mobilization of natural colloids in a ferric oxyhydroxide-coated aquifer sediment. The field experiments were conducted as natural gradient injections of groundwater amended by sodium hydroxide additions. The laboratory experiments were conducted in columns of undisturbed, oriented sediments and disturbed, disoriented sediments. In the field, the breakthrough of released colloids coincided with the pH pulse breakthrough and lagged the bromide tracer breakthrough. The breakthrough behavior suggested that the progress of the elevated pH front controlled the transport of the mobilized colloids. In the laboratory, about twice as much colloid release occurred in the disturbed sediments as in the undisturbed sediments. The field and laboratory experiments both showed that the total mass of colloid release increased with increasing pH until the concurrent increase in ionic strength limited release. A decrease in ionic strength did not mobilize significant amounts of colloids in the field. The amount of colloids released normalized to the mass of the sediments was similar for the field and the undisturbed laboratory experiments.

Ins and outs of a complex subduction zone: C cycling along the Sunda margin, Indonesia

NASA Astrophysics Data System (ADS)

House, B. M.; Bebout, G. E.; Hilton, D. R.

2016-12-01

Subduction of C in marine sediments and altered oceanic crust is the main mechanism for reintroducing C into the deep earth and removing it from communication with the ocean and atmosphere. However, detailed studies of individual margins - which are necessary to understanding global C cycling - are sparse. The thick, C-rich sediment column along the Sunda margin, Indonesia makes understanding this margin crucial for constructing global C cycling budgets. Furthermore it is an ideal location to compare cycling of organic and carbonate C due to the abrupt transition from carbonate-dominated sediments in the SE to sediments rich in organic C from the Nicobar Fan in the NW. To quantify and characterize C available for subduction, we analyzed samples from DSDP 211, 260, 261, and ODP 765, all outboard of the trench, as well as piston and gravity cores of locally-sourced terrigenous trench fill. We created a 3-D model of overall sediment thickness and the thicknesses of geochemically distinct sedimentary units using archived and published seismic profiles to infer unit thicknesses at and along the 2500 km trench. This model vastly improves estimates of the C available for subduction and also reveals that the Christmas Island Seamount Province serves as a barrier to turbidite flow, dividing the regions of the trench dominated by organic and inorganic C input. Incorporating best estimates for the depth of the decollement indicates that the terrigenous trench fill, with up to 1.5 wt % organic C, is entirely accreted as is the thick section of carbonate-rich turbidites that dominate the southeastern portion of the margin (DSDP 261/ODP 765). Organic C accounts for most of the C bypassing the accretionary complex NW of the Christmas Island Seamount Province, and C inputs to the trench are lower there than to the SE where carbonate units near the base of the sediment column are the dominant C source. Release of C from altered oceanic crust - a C reservoir up to 10 times greater than sediments - can resolve the apparent conflict between the carbonate signal in volcanic emissions and scarcity of carbonate in subducting sediments along the NW of the arc. This study lays the foundation for refined methods of comparing subduction inputs and arc outputs of C at convergent margins.

The geochemistry of methane in Lake Fryxell, an amictic, permanently ice-covered, antarctic lake

USGS Publications Warehouse

Smith, R.L.; Miller, L.G.; Howes, B.L.

1993-01-01

The abundance and distribution of dissolved CH4 were determined from 1987-1990 in Lake Fryxell, Antarctica, an amictic, permanently ice-covered lake in which solute movement is controlled by diffusion. CH4 concentrations were < 1 ??M in the upper oxic waters, but increased below the oxycline to 936 ??M at 18 m. Sediment CH4 was 1100 ??mol (1 sed)-1 in the 0-5 cm zone. Upward flux from the sediment was the source of the CH4, NH4 +, and DOC in the water column; CH4 was 27% of the DOC+CH4 carbon at 18 m. Incubations with surficial sediments indicated that H14CO3 - reduction was 0.4 ??mol (1 sed)-1 day-1 or 4?? the rate of acetate fermentation to CH4. There was no measurable CH4 production in the water column. However, depth profiles of CH4, NH4, and DIC normalized to bottom water concentrations demonstrated that a significant CH4 sink was evident in the anoxic, sulfate-containing zone of the water column (10-18 m). The ??13CH4 in this zone decreased from -72 % at 18 m to -76% at 12 m, indicating that the consumption mechanism did not result in an isotopic enrichment of 13CH4. In contrast, ??13CH4 increased to -55 % at 9 m due to aerobic oxidation, though this was a minor aspect of the CH4 cycle. The water column CH4 profile was modeled by coupling diffusive flux with a first order consumption term; the best-fit rate constant for anaerobic CH4 consumption was 0.012 yr-1. On a total carbon basis, CH4 consumption in the anoxic water column exerted a major effect on the flux of carbonaceous material from the underlying sediments and serves to exemplify the importance of CH4 to carbon cycling in Lake Fryxell. ?? 1993 Kluwer Academic Publishers.

Distribution of the Luminous Bacterium Beneckea harveyi in a Semitropical Estuarine Environment

PubMed Central

O'Brien, Catherine H.; Sizemore, Ronald K.

1979-01-01

Bioluminescent bacteria were found in the water column, sediment, shrimp, and gastrointestinal tract of marine fishes from the semitropical estuarine environment of the East Lagoon, Galveston Island, Tex. Populations in the water column decreased during cold weather while sedimentary populations persisted. The highest percentages of luminous organisms were isolated from the gastrointestinal tract of marine fishes, where they persisted during 5 days of starvation. The presence of chitin temporarily increased intestinal populations. All isolates were Beneckea harveyi, whose natural habitat appears to be the gut of fishes and whose free-living reservoir appears to be marine sediments. PMID:16345465

Marine sediment tolerances for remote sensing of atmospheric aerosols over water

NASA Technical Reports Server (NTRS)

Whitlock, C. H.

1982-01-01

In surveying the literature, it is pointed out that there is a need to quantify the turbidity below which reflectance from the water column is negligible in comparison with atmospheric effects to allow the monitoring of aerosol optical depth over water bodies. Data that partially satisfy this need are presented. Laboratory measurements of reflectance upwelled from the water column are given for mixtures with various types of sediment at wavelengths between 400 and 1600 nm. The results of the study described here are a quantitative endorsement of the recommendations of Morell and Gordon (1980).

Remediation of metal-contaminated marine sediments using active capping with limestone, steel slag, and activated carbon: a laboratory experiment.

PubMed

Park, Seong-Jik; Kang, Ku; Lee, Chang-Gu; Choi, Jae-Woo

2018-05-18

The objectives of this study are to assess the effectiveness of limestone (LS), steel slag (SS), and activated carbon (AC) as capping materials to sequester trace metals including As, Cd, Cr, Cu, Ni, Pb, and Zn in heavily contaminated marine sediments and to minimize the release of these metals into the water column. A flat flow tank was filled with 10 mm of capping material, contaminated sediments, and seawater, and the metal concentrations were monitored over 32 d. After completion of the flow tank experiments, the sediments below the capping material were sampled and were sequentially extracted. SS effectively reduced the As, Cr, Cu, Ni, Pb, and particularly Cd elution from the contaminated sediments to the overlying seawater. Adsorption and surface precipitation were the key mechanisms for interrupting the release of cationic trace metals by SS. LS was appropriate for interrupting the release of only Cu and Pb with high hydrolysis reaction constants. AC capping could interrupt the release of Cr, Cu, Ni, and particularly Zn from the sediments by binding with the metals via electrostatic interaction. The results obtained from the sequential extraction revealed that LS capping is appropriate for stabilizing Zn, whereas AC is appropriate for Cd and Pb. LS, SS, and AC can be applied effectively for remediation of sediments contaminated by trace metals because it interrupts their release and stabilizes the trace metals in the sediments.

Immobilization of U(VI) from oxic groundwater by Hanford 300 Area sediments and effects of Columbia River water.

PubMed

Ahmed, Bulbul; Cao, Bin; Mishra, Bhoopesh; Boyanov, Maxim I; Kemner, Kenneth M; Fredrickson, Jim K; Beyenal, Haluk

2012-09-01

Regions within the U.S. Department of Energy Hanford 300 Area (300 A) site experience periodic hydrologic influences from the nearby Columbia River as a result of changing river stage, which causes changes in groundwater elevation, flow direction and water chemistry. An important question is the extent to which the mixing of Columbia River water and groundwater impacts the speciation and mobility of uranium (U). In this study, we designed experiments to mimic interactions among U, oxic groundwater or Columbia River water, and 300 A sediments in the subsurface environment of Hanford 300 A. The goals were to investigate mechanisms of: 1) U immobilization in 300 A sediments under bulk oxic conditions and 2) U remobilization from U-immobilized 300 A sediments exposed to oxic Columbia River water. Initially, 300 A sediments in column reactors were fed with U(VI)-containing oxic 1) synthetic groundwater (SGW), 2) organic-amended SGW (OA-SGW), and 3) de-ionized (DI) water to investigate U immobilization processes. After that, the sediments were exposed to oxic Columbia River water for U remobilization studies. The results reveal that U was immobilized by 300 A sediments predominantly through reduction (80-85%) when the column reactor was fed with oxic OA-SGW. However, U was immobilized by 300 A sediments through adsorption (100%) when the column reactors were fed with oxic SGW or DI water. The reduced U in the 300 A sediments fed with OA-SGW was relatively resistant to remobilization by oxic Columbia River water. Oxic Columbia River water resulted in U remobilization (∼7%) through desorption, and most of the U that remained in the 300 A sediments fed with OA-SGW (∼93%) was in the form of uraninite nanoparticles. These results reveal that: 1) the reductive immobilization of U through OA-SGW stimulation of indigenous 300 A sediment microorganisms may be viable in the relatively oxic Hanford 300 A subsurface environments and 2) with the intrusion of Columbia River water, desorption may be the primary process resulting in U remobilization from OA-SGW-stimulated 300 A sediments at the subsurface of the Hanford 300 A site. Copyright © 2012 Elsevier Ltd. All rights reserved.

Assessment of possible sources of microbiological contamination in the water column and streambed sediment of the Jacks Fork, Ozark National Scenic Riverways, Missouri - Phase III

USGS Publications Warehouse

Davis, Jerri V.; Barr, Miya N.

2006-01-01

In 1998, a 5 river-mile reach of the Jacks Fork was included on Missouri's list of impaired waters as required by Section 303(d) of the Federal Clean Water Act. The identified pollutant on the Jacks Fork was fecal coliform bacteria. The length of the impaired reach was changed to 7 miles on the Missouri 2002 303(d) list because of data indicating the fecal coliform bacteria problem existed over a broader area. The U.S. Geological Survey, in cooperation with the National Park Service, conducted a study to better understand the extent and sources of microbiological contamination within the Jacks Fork from Alley Spring to the mouth, which includes the 7-mile 303(d) reach. Ten sites were sampled from June 2003 through October 2003 and from June 2004 through October 2004. Water-column and streambed sediment samples were collected from main-stem and tributary sites mostly during base-flow conditions during a variety of recreational season river uses and analyzed for fecal coliform and Escherichia coli bacteria. Isolates of Escherichia coli obtained from water samples collected at five sites were submitted for rep-PCR analysis to identify presumptive sources of fecal indicator bacteria in the Jacks Fork. Results indicate that recreational users (including boaters and swimmers) are not the primary source of fecal coliform bacteria in the Jacks Fork; rather, the presence of fecal coliform bacteria is associated with other animals, of which horses are the primary source. Increases in fecal coliform bacteria densities in the Jacks Fork are associated with cross-country horseback trail-riding events.

Testing of SIR (a transformable robotic submarine) in Lake Tahoe for future deployment at West Antarctic Ice Sheet grounding lines of Siple Coast

NASA Astrophysics Data System (ADS)

Powell, R. D.; Scherer, R. P.; Griffiths, I.; Taylor, L.; Winans, J.; Mankoff, K. D.

2011-12-01

A remotely operated vehicle (ROV) has been custom-designed and built by DOER Marine to meet scientific requirements for exploring subglacial water cavities. This sub-ice rover (SIR) will explore and quantitatively document the grounding zone areas of the Ross Ice Shelf cavity using a 3km-long umbilical tether by deployment through an 800m-long ice borehole in a torpedo shape, which is also its default mode if operational failure occurs. Once in the ocean cavity it transforms via a diamond-shaped geometry into a rectangular form when all of its instruments come alive in its flight mode. Instrumentation includes 4 cameras (one forward-looking HD), a vertical scanning sonar (long-range imaging for spatial orientation and navigation), Doppler current meter (determine water current velocities), multi-beam sonar (image and swath map bottom topography), sub-bottom profiler (profile sub-sea-floor sediment for geological history), CTD (determine salinity, temperature and depth), DO meter (determine dissolved oxygen content in water), transmissometer (determine suspended particulate concentrations in water), laser particle-size analyzer (determine sizes of particles in water), triple laser-beams (determine size and volume of objects), thermistor probe (measure in situ temperatures of ice and sediment), shear vane probe (determine in situ strength of sediment), manipulator arm (deploy instrumentation packages, collect samples), shallow ice corer (collect ice samples and glacial debris), water sampler (determine sea water/freshwater composition, calibrate real-time sensors, sample microbes), shallow sediment corer (sample sea floor, in-ice and subglacial sediment for stratigraphy, facies, particle size, composition, structure, fabric, microbes). A sophisticated array of data handling, storing and displaying will allow real-time observations and environmental assessments to be made. This robotic submarine and other instruments will be tested in Lake Tahoe in September, 2011 and results will be presented on its trials and geological and biological findings down to the deepest depths of the lake. Other instruments include a 5m-ling percussion corer for sampling deeper sediments, an ice-tethered profiler with CTD and ACDP, and in situ oceanographic mooring designed to fit down a narrow (30cm-diameter) ice borehole that include interchangeable packages of ACDPs, CTDs, transmissometers, laser particle-size analyzer, DO meter, automated multi-port water sampler, water column nutrient analyzer, sediment porewater chemistry analyzer, down-looking color camera (see figure), and altimeter.

The effect of sediment mixing on mercury dynamics in two intertidal mudflats at Great Bay Estuary, New Hampshire, USA

PubMed Central

Brown, Lauren E.; Chen, Celia Y.; Voytek, Mary A.; Amirbahman, Aria

2016-01-01

Estuarine sediments store particulate contaminants including mercury (Hg). We studied Hg sediment dynamics in two intertidal mudflats at Great Bay estuary, NH, over multiple years. Sediments at both mudflats were physically mixed down to ~10 cm, as determined by 7Be measurements, albeit via different mechanisms. Portsmouth mudflat (PT) sediments were subject to bioturbation by infaunal organisms and Squamscott mudflat (SQ) sediments were subject to erosion and redeposition. The presence of higher concentrations of fresh Fe(III) hydroxide at PT suggested bioirrigation by the polychaetes (Nereis virens). At depths where infaunal bioirrigation was observed, pore-water inorganic Hg (Hgi) and methylmercury (MeHg) were lower potentially due to their interaction with Fe(III) hydroxide. Methylmercury concentrations increased immediately below this zone in some samples, suggesting that the observed increase in material flux in bioirrigated sediments may initiate from lower depths. Pore water in sediment at PT also had higher fractions of more protein-like and labile DOC than those at SQ that can lead to increased MeHg production in PT, especially at depths where Hgi is not removed from solution by Fe(III) hydroxide. Where sediment erosion and redeposition were observed at SQ, Hg species distribution was extended deeper into the sediment column. Moreover, methyl coenzyme M reductase (MCR) and mercury reductase (mer-A) genes were higher at SQ than PT suggesting differences in conditions for Hg cycling. Results showed that the near-surface region of high MeHg concentrations commonly observed in unmixed sediments does not exist in physically mixed sediments that are common in many estuarine environments. PMID:26924879

Evaluation of surficial sediment toxicity and sediment physico-chemical characteristics of representative sites in the Lagoon of Venice (Italy)

NASA Astrophysics Data System (ADS)

Losso, C.; Arizzi Novelli, A.; Picone, M.; Marchetto, D.; Pessa, G.; Molinaroli, E.; Ghetti, P. F.; Volpi Ghirardini, A.

2004-11-01

Toxic hazard in sites with varying types and levels of contamination in the Lagoon of Venice was estimated by means of toxicity bioassays based on the early life-stages of the autochthonous sea urchin Paracentrotus lividus. Elutriate was chosen as the test matrix, due to its ability to highlight potential toxic effects towards sensitive biological components of the water column caused by sediment resuspension phenomena affecting the Lagoon. Surficial sediments (core-top 5 cm deep), directly influenced by resuspension/redeposition processes, and core sediments (core 20 cm deep), recording time-mediated contamination, were sampled in some sites located in the lagoonal area most greatly influenced by anthropogenic activities. Particle size, organic matter and water content were also analysed. In two sites, the results of physical parameters showed that the core-top sediments were coarser than the 20-cm core sediments. Sperm cell toxicity test results showed the negligible acute toxicity of elutriates from all investigated sites. The embryo toxicity test demonstrated a short-term chronic toxicity gradient for elutriates from the 20-cm core sediments, in general agreement both with the expected contamination gradient and with results of the Microtox® solid-phase test. Elutriates of the core-top 5-cm sediments revealed a totally inverted gradient, in comparison with that for the 20-cm core sediments, and the presence of a "hot spot" of contamination in the site chosen as a possible reference. Investigations on ammonia and sulphides as possible confounding factors excluded their contribution to this "hot spot". Integrated physico-chemical and toxicity results on sediments at various depths demonstrated the presence of disturbed sediments in the central basin of the Lagoon of Venice.

The effect of sediment mixing on mercury dynamics in two intertidal mudflats at Great Bay Estuary, New Hampshire, USA.

PubMed

Brown, Lauren E; Chen, Celia Y; Voytek, Mary A; Amirbahman, Aria

2015-12-01

Estuarine sediments store particulate contaminants including mercury (Hg). We studied Hg sediment dynamics in two intertidal mudflats at Great Bay estuary, NH, over multiple years. Sediments at both mudflats were physically mixed down to ~10 cm, as determined by 7 Be measurements, albeit via different mechanisms. Portsmouth mudflat (PT) sediments were subject to bioturbation by infaunal organisms and Squamscott mudflat (SQ) sediments were subject to erosion and redeposition. The presence of higher concentrations of fresh Fe(III) hydroxide at PT suggested bioirrigation by the polychaetes ( Nereis virens ). At depths where infaunal bioirrigation was observed, pore-water inorganic Hg (Hg i ) and methylmercury (MeHg) were lower potentially due to their interaction with Fe(III) hydroxide. Methylmercury concentrations increased immediately below this zone in some samples, suggesting that the observed increase in material flux in bioirrigated sediments may initiate from lower depths. Pore water in sediment at PT also had higher fractions of more protein-like and labile DOC than those at SQ that can lead to increased MeHg production in PT, especially at depths where Hg i is not removed from solution by Fe(III) hydroxide. Where sediment erosion and redeposition were observed at SQ, Hg species distribution was extended deeper into the sediment column. Moreover, methyl coenzyme M reductase (MCR) and mercury reductase ( mer -A) genes were higher at SQ than PT suggesting differences in conditions for Hg cycling. Results showed that the near-surface region of high MeHg concentrations commonly observed in unmixed sediments does not exist in physically mixed sediments that are common in many estuarine environments.

Impact of Saharan dust events on radionuclide levels in Monaco air and in the water column of the northwest Mediterranean Sea.

PubMed

Pham, Mai Khanh; Chamizo, Elena; Mas Balbuena, José Luis; Miquel, Juan-Carlos; Martín, Jacobo; Osvath, Iolanda; Povinec, Pavel P

2017-01-01

Characterization of atmospheric aerosols collected in Monaco (2004-2008) and in sediment traps at 200 m and 1000 m water depths at the DYFAMED (Dynamics of Atmospheric Fluxes in the Mediterranean Sea) station (2004) was carried out to improve our understanding of the impact of Saharan dust on ground-level air and on the water column. Activity concentrations of natural ( 210 Pb, 210 Po, uranium and radium isotopes) and anthropogenic ( 137 Cs, 239 Pu, 240 Pu, and 239+240 Pu) radionuclides and their isotopic ratios confirmed a Saharan impact on the investigated samples. In association with a large particulate matter deposition event in Monaco on 20 February 2004, the 137 Cs (∼40 Bq kg -1 ) and 239+240 Pu (∼1 Bq kg -1 ) activities were almost a factor of two higher than other Saharan deposition dust events. This single-day particle flux represented 72% of the annual atmospheric deposition in Monaco. The annual deposition of Saharan dust on the sea was 232-407 mBq m -2 for 137 Cs and 6.8-9.8 mBq m -2 for 239+240 Pu and contributed significantly (28-37% for 137 Cs and 34-45% for 239+240 Pu) to the total annual atmospheric input to the northwest Mediterranean Sea. The 137 Cs/ 239+240 Pu activity ratios in dust samples collected during different Saharan dust events confirmed their global fallout origin or mixing with local re-suspended soil particles. In the sediment trap samples the 137 Cs activity varied by a factor of two, while the 239+240 Pu activity was constant, confirming the different behaviors of Cs (dissolved) and Pu (particle reactive) in the water column. The 137 Cs and 239+240 Pu activities of sinking particles during the period of the highest mass flux collected in 20 February 2004 at the 200 m and 1000 m water depths represented about 10% and 15%, respectively, of annual deposition from Saharan dust events. Copyright © 2016 Elsevier Ltd. All rights reserved.

The biological pump and lower trophic level controls on carbon cycling in Lake Superior: Insights from a multi-pronged study

NASA Astrophysics Data System (ADS)

Schreiner, K. M.; Bramburger, A.; Ozersky, T.; Sheik, C.; Steinman, B. A.

2016-02-01

Lake Superior is the largest freshwater lake in the world, supporting economically important fisheries and providing drinking water to hundreds of thousands of people. In recent decades, summer surface water temperature and the intensity and duration of water column stratification in the lake has increased steadily. These physical changes have resulted in significant perturbations to lower trophic level ecosystem characteristics. Recent observations of Great Lakes plankton assemblages have revealed multi-decadal patterns of community reorganization, with increased relative abundance of taxa characteristic of warmer waters. These changes, coupled with changing nutrient concentrations and colonization by non-native taxa, threaten to shift trophic structure and carbon dynamics at the bottom of the food web. To this end, this study seeks to quantify the impacts of this ecosystem shift on carbon fixation, the biological pump, and organic carbon cycling in Lake Superior. Utilizing a combined sampling approach, in the summer of 2015 we collected water, sediment, and biological samples across a nearshore-to-offshore gradient in the western arm of Lake Superior. Analyses included the community composition of bacteria, archaea, phytoplankton, and zooplankton; water column carbon and nutrient speciation; algal pigments and pigment degradation products; and net primary productivity. The collection of surface sediments allowed for additional assessment of benthic-pelagic coupling. The novel combination of this wide-ranging set of analyses to a locally and globally important water body like Lake Superior allowed us to fully assess the interactions between lower trophic level biology and carbon and nutrient cycling throughout the water column. Preliminary data indicates that microbial community composition was variable across the western arm of Lake Superior and showed signs of stratification at individual stations (>100 m deep). Sample collection occurred soon after lake stratification in July 2015, and the presence of a deep chlorophyll maximum was noted. The results shed light on the functioning of the biological pump and nutrient and carbon dynamics in a changing ecosystem and provides insight on how further change in Lake Superior and other aquatic systems will affect ecosystem function and services.

Ecology of exposed sandy beaches in northern Spain: Environmental factors controlling macrofauna communities

NASA Astrophysics Data System (ADS)

Lastra, M.; de La Huz, R.; Sánchez-Mata, A. G.; Rodil, I. F.; Aerts, K.; Beloso, S.; López, J.

2006-02-01

Thirty-four exposed sandy beaches on the northern coast of Spain (from 42°11' to 43°44'N, and from 2°04' to 8°52' W; ca. 1000 km) were sampled over a range of beach sizes, beach morphodynamics and exposure rates. Ten equally spaced intertidal shore levels along six replicated transects were sampled at each beach. Sediment and macrofauna samples were collected using corers to a depth of 15 cm. Morphodynamic characteristics such as the beach face slope, wave environment, exposure rates, Dean's parameter and Beach State Index were estimated. Biotic results indicated that in all the beaches the community was dominated by isopods, amphipods and polychaetes, mostly belonging to the detritivorous-opportunistic trophic group. The number of intertidal species ranged from 9 to 31, their density being between 31 and 618 individuals m - 2 , while individuals per linear metre (m - 1 ) ranged from 4962 to 17 2215. The biomass, calculated as total ash-free dry weight (AFDW) varied from 0.027 to 2.412 g m - 2 , and from 3.6 to 266.6 g m - 1 . Multiple regression analysis indicated that number of species significantly increased with proximity to the wind-driven upwelling zone located to the west, i.e., west-coast beaches hosted more species than east-coast beaches. The number of species increased with decreasing mean grain size and increasing beach length. The density of individuals m - 2 increased with decreasing mean grain size, while biomass m - 2 increased with increasing food availability estimated as chlorophyll-a concentration in the water column of the swash zone. Multiple-regression analysis indicated that chlorophyll-a in the water column increased with increasing western longitude. Additional insights provided by single-regression analysis showed a positive relationship between the number of species and chlorophyll-a, while increasing biomass occurred with increasing mean grain size of the beach. The results indicate that community characteristics in the exposed sandy beaches studied are affected by physical characteristics such as sediment size and beach length, but also by other factors dependent on coastal processes, such as food availability in the water column.

Instrument developments for chemical and physical characterization, mapping and sampling of extreme environments (Antarctic sub ice environment)

NASA Astrophysics Data System (ADS)

Vogel, S. W.; Powell, R. D.; Griffith, I.; Lawson, T.; Schiraga, S.; Ludlam, G.; Oen, J.

2009-12-01

A number of instrumentation is currently under development designed to enable the study of subglacial environments in Antarctica through narrow kilometer long boreholes. Instrumentation includes: - slim line Sub-Ice ROV (SIR), - Geochemical Instrumentation Package for Sub Ice Environments (GIPSIE) to study geochemical fluxes in water and across the sediment water interface (CO2, CH4, dO, NH4, NO3, Si, PO4, pH, redox, T, H2, HS, O2, N2O, CTD, particle size, turbidity, color camera, current meter and automated water sampler) with real-time telemetry for targeted sampling, - long term energy-balance mooring system, - active source slide hammer sediment corer, and - integration of a current sensor into the ITP profiler. The instrumentation design is modular and suitable for remote operated as well as autonomous long-term deployment. Of interest to the broader science community is the development of the GIPSIE and efforts to document the effect of sample recovery from depth on the sample chemistry. The GIPSIE is a geochemical instrumentation package with life stream telemetry, allowing for user controlled targeted sampling of water column and the water sediment interphase for chemical and biological work based on actual measurements and not a preprogrammed automated system. The porewater profiler (pH, redox, T, H2, HS, O2, N2O) can penetrate the upper 50 cm of sediment and penetration is documented with real time video. Associated with GIPSIE is an on-site lab set-up, utilizing a set of identical sensors. Comparison between the insitu measurements and measurements taken onsite directly after samples are recovered from depth permits assessing the effect of sample recovery on water and sediment core chemistry. Sample recovery related changes are mainly caused by changes in the pressure temperature field and exposure of samples to atmospheric conditions. Exposure of anaerobic samples to oxygen is here a specific concern. Recovery from depth effects in generally pH, solubility of gases and nutrients and can initiate complex chemical reaction, the product of which is later measured in the lab. Further information on the instrument developments can be found at http://jove.geol.niu.edu/faculty/svogel/Technology/Technology-index.html

Food availability to an Adamussium bed during the austral summer 1993/1994 (Terra Nova Bay, Ross Sea)

NASA Astrophysics Data System (ADS)

Albertelli, G.; Cattaneo-Vietti, R.; Chiantore, M.; Pusceddu, A.; Fabiano, M.

1998-11-01

In the framework of the ROSSMIZE Project (Ross Sea Marginal Ice Zone Ecology) of the Italian Antarctic Research Programme (PNRA), the organic matter flux through the water column and its role on benthic communities have been taken in particular account. During the austral Summer 1993-1994, from December 27, 1993 to February 11, 1994, a study on this flux in shallow waters was carried out, in a station close to Terra Nova Bay Italian base (Ross Sea), at 40 m depth. This site is characterized by the filter-feeding Adamussium colbecki, a scallop which reaches high values of density (60 ind/m 2) and biomass (120 g DW/m 2). At the beginning of the sampling period, a sediment trap was positioned on the sea-bottom and samples were collected every 3-5 days, as well as temperature, salinity and fluorescence data from sea surface to bottom. Fluorescence profiles put in evidence a phytoplankton bloom occurring during the maximum water column stratification, in the last decade of January. Organic matter flux through the water column showed rather constant values up to the 24th of January. Immediately after, a sudden increase took place (24-29 January), reaching 13.55 g/m 2/d for TSM, 0.24 g/m 2/d for lipids, 0.53 g/m 2/d for proteins, 0.37 g/m 2/d for carbohydrates, 0.69 g/m 2/d and 0.1 g/m 2/d for POC and PON, respectively, 0.5 and 2.8 mg/m 2/d for chlorophyll- a and phaeopigments, in correspondence to the fluorescence peak occurring in the same period. A large part of the total flux was represented by oval faecal pellets, as accounted by microscopical observations of sedimented material. Most of the pellets were 200-300 μm long, filled mainly by diatom frustules.

The Relationship between the Distribution of Common Carp and Their Environmental DNA in a Small Lake

PubMed Central

Eichmiller, Jessica J.; Bajer, Przemyslaw G.; Sorensen, Peter W.

2014-01-01

Although environmental DNA (eDNA) has been used to infer the presence of rare aquatic species, many facets of this technique remain unresolved. In particular, the relationship between eDNA and fish distribution is not known. We examined the relationship between the distribution of fish and their eDNA (detection rate and concentration) in a lake. A quantitative PCR (qPCR) assay for a region within the cytochrome b gene of the common carp (Cyprinus carpio or ‘carp’), an ubiquitous invasive fish, was developed and used to measure eDNA in Lake Staring (MN, USA), in which both the density of carp and their distribution have been closely monitored for several years. Surface water, sub-surface water, and sediment were sampled from 22 locations in the lake, including areas frequently used by carp. In water, areas of high carp use had a higher rate of detection and concentration of eDNA, but there was no effect of fish use on sediment eDNA. The detection rate and concentration of eDNA in surface and sub-surface water were not significantly different (p≥0.5), indicating that eDNA did not accumulate in surface water. The detection rate followed the trend: high-use water > low-use water > sediment. The concentration of eDNA in sediment samples that were above the limit of detection were several orders of magnitude greater than water on a per mass basis, but a poor limit of detection led to low detection rates. The patchy distribution of eDNA in the water of our study lake suggests that the mechanisms that remove eDNA from the water column, such as decay and sedimentation, are rapid. Taken together, these results indicate that effective eDNA sampling methods should be informed by fish distribution, as eDNA concentration was shown to vary dramatically between samples taken less than 100 m apart. PMID:25383965

The relationship between the distribution of common carp and their environmental DNA in a small lake.

PubMed

Eichmiller, Jessica J; Bajer, Przemyslaw G; Sorensen, Peter W

2014-01-01

Although environmental DNA (eDNA) has been used to infer the presence of rare aquatic species, many facets of this technique remain unresolved. In particular, the relationship between eDNA and fish distribution is not known. We examined the relationship between the distribution of fish and their eDNA (detection rate and concentration) in a lake. A quantitative PCR (qPCR) assay for a region within the cytochrome b gene of the common carp (Cyprinus carpio or 'carp'), an ubiquitous invasive fish, was developed and used to measure eDNA in Lake Staring (MN, USA), in which both the density of carp and their distribution have been closely monitored for several years. Surface water, sub-surface water, and sediment were sampled from 22 locations in the lake, including areas frequently used by carp. In water, areas of high carp use had a higher rate of detection and concentration of eDNA, but there was no effect of fish use on sediment eDNA. The detection rate and concentration of eDNA in surface and sub-surface water were not significantly different (p≥0.5), indicating that eDNA did not accumulate in surface water. The detection rate followed the trend: high-use water > low-use water > sediment. The concentration of eDNA in sediment samples that were above the limit of detection were several orders of magnitude greater than water on a per mass basis, but a poor limit of detection led to low detection rates. The patchy distribution of eDNA in the water of our study lake suggests that the mechanisms that remove eDNA from the water column, such as decay and sedimentation, are rapid. Taken together, these results indicate that effective eDNA sampling methods should be informed by fish distribution, as eDNA concentration was shown to vary dramatically between samples taken less than 100 m apart.

Assessing the Potential for Sediment Gravity-Driven Underflows at the Currently Active Mouth of the Huanghe Delta

NASA Astrophysics Data System (ADS)

Mullane, M.; Kumpf, L. L.; Kineke, G. C.

2017-12-01

The Huanghe (Yellow River), once known for extremely high suspended-sediment concentrations (SSCs) that could produce hyperpycnal plumes (10s of g/l), has experienced a dramatic reduction in sediment load following the construction of several reservoirs, namely the Xiaolangdi reservoir completed in 1999. Except for managed flushing events, SSC in the lower river is now on the order of 1 g/l or less. Adaptations of the Chezy equation for gravity-driven transport show that dominant parameters driving hyperpycnal underflows include concentration (and therefore density), thickness of a sediment-laden layer and bed slope. The objectives of this research were to assess the potential for gravity-driven underflows given modern conditions at the active river mouth. Multiple shore-normal transects were conducted during research cruises in mid-July of 2016 and 2017 using a Knudsen dual-frequency echosounder to collect bathymetric data and to document the potential presence of fluid mud layers. An instrumented profiling tripod equipped with a CTD, optical backscatterance sensor and in-situ pump system were used to sample water column parameters. SSCs were determined from near-bottom and surface water samples. Echosounder data were analyzed for bed slopes at the delta-front and differences in depth of return for the two frequencies (50 and 200 kHz), which could indicate fluid muds. Bathymetric data analysis yielded bed slope measurements near or above threshold values to produce gravity-driven underflows (0.46°). The maximum observed thickness of a potential fluid mud layer was 0.7 m, and the highest sampled near-bed SSCs were nearly 14 g/l for both field campaigns. These results indicate that the modern delta maintains potential for sediment gravity-driven underflows, even during ambient conditions prior to maximum summer discharge. These results will inform future work quantitatively comparing the contributions of all sediment dispersal mechanisms near the active Huanghe delta environment, including advection of the buoyant river plume and wave resuspension and transport by tidal currents.

Stratification and loading of fecal indicator bacteria (FIB) in a tidally muted urban salt marsh.

PubMed

Johnston, Karina K; Dorsey, John H; Saez, Jose A

2015-03-01

Stratification and loading of fecal indicator bacteria (FIB) were assessed in the main tidal channel of the Ballona Wetlands, an urban salt marsh receiving muted tidal flows, to (1) determine FIB concentration versus loading within the water column at differing tidal flows, (2) identify associations of FIB with other water quality parameters, and (3) compare wetland FIB concentrations to the adjacent estuary. Sampling was conducted four times during spring-tide events; samples were analyzed for FIB and turbidity (NTU) four times over a tidal cycle at pre-allocated depths, depending on the water level. Additional water quality parameters measured included temperature, salinity, oxygen, and pH. Loadings were calculated by integrating the stratified FIB concentrations with water column cross-sectional volumes corresponding to each depth. Enterococci and Escherichia coli were stratified both by concentration and loading, although these variables portrayed different patterns over a tidal cycle. Greatest concentrations occurred in surface to mid-strata levels, during flood tides when contaminated water flowed in from the estuary, and during ebb flows when sediments were suspended. Loading was greatest during flood flows and diminished during low tide periods. FIB concentrations within the estuary often were significantly greater than those within the wetland tide channel, supporting previous studies that the wetlands act as a sink for FIB. For public health water quality monitoring, these results indicate that more accurate estimates of FIB concentrations would be obtained by sampling a number of points within a water column rather than relying only on single surface samples.

Variable-Field Analytical Ultracentrifugation: I. Time-Optimized Sedimentation Equilibrium

PubMed Central

Ma, Jia; Metrick, Michael; Ghirlando, Rodolfo; Zhao, Huaying; Schuck, Peter

2015-01-01

Sedimentation equilibrium (SE) analytical ultracentrifugation (AUC) is a gold standard for the rigorous determination of macromolecular buoyant molar masses and the thermodynamic study of reversible interactions in solution. A significant experimental drawback is the long time required to attain SE, which is usually on the order of days. We have developed a method for time-optimized SE (toSE) with defined time-varying centrifugal fields that allow SE to be attained in a significantly (up to 10-fold) shorter time than is usually required. To achieve this, numerical Lamm equation solutions for sedimentation in time-varying fields are computed based on initial estimates of macromolecular transport properties. A parameterized rotor-speed schedule is optimized with the goal of achieving a minimal time to equilibrium while limiting transient sample preconcentration at the base of the solution column. The resulting rotor-speed schedule may include multiple over- and underspeeding phases, balancing the formation of gradients from strong sedimentation fluxes with periods of high diffusional transport. The computation is carried out in a new software program called TOSE, which also facilitates convenient experimental implementation. Further, we extend AUC data analysis to sedimentation processes in such time-varying centrifugal fields. Due to the initially high centrifugal fields in toSE and the resulting strong migration, it is possible to extract sedimentation coefficient distributions from the early data. This can provide better estimates of the size of macromolecular complexes and report on sample homogeneity early on, which may be used to further refine the prediction of the rotor-speed schedule. In this manner, the toSE experiment can be adapted in real time to the system under study, maximizing both the information content and the time efficiency of SE experiments. PMID:26287634

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, Guoping; Luo, Wensui; Brooks, Scott C

We conducted batch and recirculating column titration tests with contaminated acidic sediments with controlled CO2 in the headspace, and extended the geochemical model by Gu et al. (2003, GCA) to better understand and quantify the reactions governing trace metal fate in the subsurface. The sediment titration curve showed slow pH increase due to strong buffering by Al precipitation and CO2 uptake. Assuming precipitation of basaluminite at low saturation index (SI=-4), and decreasing cation exchange selectivity coefficient (kNa\\Al=0.3), the predictions are close to the observed pH and Al; and the model explains 1) the observed Ca, Mg, and Mn concentration decreasemore » by cation exchange with sorbed Al, and 2) the decrease of U by surface complexation with Fe hydroxides at low pH, and precipitation as liebigite (Ca2UO2(CO3)3:10H2O) at pH>5.5. Without further adjustment geochemical parameters, the model describes reasonably well previous sediment and column titration tests without CO2 in the headspace, as well as the new large column test. The apparent inhibition of U and Ni decrease in the large column can be explained by formation of aqueous carbonate complexes and/or competition with carbonate for surface sites. These results indicated that ignoring labile solid phase Al would underestimate base requirement in titration of acidic aquifers.« less

Vertical and horizontal fluxes of plutonium and americium in the western Mediterranean and the Strait of Gibraltar.

PubMed

León Vintró, L; Mitchell, P I; Condren, O M; Downes, A B; Papucci, C; Delfanti, R

1999-09-30

New data on the vertical distributions of plutonium and americium in the waters of the western Mediterranean and the Strait of Gibraltar are examined in terms of the processes governing their delivery to, transport in and removal from the water column within the basin. Residence times for plutonium and americium in surface waters of approximately 15 and approximately 3 years, respectively, are deduced, and it is shown that by the mid 1990s only approximately 35% of the 239,240Pu and approximately 5% of the 241Am deposited as weapons fallout still resided in the water column. Present 239,240Pu inventories in the water column and the underlying sediments are estimated to be approximately 25 TBq and approximately 40 TBq, respectively, which reconcile well with the time-integrated fallout deposition in this zone, taken to be approximately 69 TBq. The data show that there are significant net outward fluxes of plutonium and americium from the basin through the Strait of Gibraltar at the present time. These appear to be compensated by net inward fluxes of similar magnitude through the Strait of Sicily. Thus, the time-integrated fallout deposition in the western basin can be accounted for satisfactorily in terms of present water column and sediment inventories. Enhanced scavenging on the continental shelves, as evidenced by the appreciably higher transuranic concentrations in shelf sediments, supports this contention.

Field evaluation of the error arising from inadequate time averaging in the standard use of depth-integrating suspended-sediment samplers

USGS Publications Warehouse

Topping, David J.; Rubin, David M.; Wright, Scott A.; Melis, Theodore S.

2011-01-01

Several common methods for measuring suspended-sediment concentration in rivers in the United States use depth-integrating samplers to collect a velocity-weighted suspended-sediment sample in a subsample of a river cross section. Because depth-integrating samplers are always moving through the water column as they collect a sample, and can collect only a limited volume of water and suspended sediment, they collect only minimally time-averaged data. Four sources of error exist in the field use of these samplers: (1) bed contamination, (2) pressure-driven inrush, (3) inadequate sampling of the cross-stream spatial structure in suspended-sediment concentration, and (4) inadequate time averaging. The first two of these errors arise from misuse of suspended-sediment samplers, and the third has been the subject of previous study using data collected in the sand-bedded Middle Loup River in Nebraska. Of these four sources of error, the least understood source of error arises from the fact that depth-integrating samplers collect only minimally time-averaged data. To evaluate this fourth source of error, we collected suspended-sediment data between 1995 and 2007 at four sites on the Colorado River in Utah and Arizona, using a P-61 suspended-sediment sampler deployed in both point- and one-way depth-integrating modes, and D-96-A1 and D-77 bag-type depth-integrating suspended-sediment samplers. These data indicate that the minimal duration of time averaging during standard field operation of depth-integrating samplers leads to an error that is comparable in magnitude to that arising from inadequate sampling of the cross-stream spatial structure in suspended-sediment concentration. This random error arising from inadequate time averaging is positively correlated with grain size and does not largely depend on flow conditions or, for a given size class of suspended sediment, on elevation above the bed. Averaging over time scales >1 minute is the likely minimum duration required to result in substantial decreases in this error. During standard two-way depth integration, a depth-integrating suspended-sediment sampler collects a sample of the water-sediment mixture during two transits at each vertical in a cross section: one transit while moving from the water surface to the bed, and another transit while moving from the bed to the water surface. As the number of transits is doubled at an individual vertical, this error is reduced by ~30 percent in each size class of suspended sediment. For a given size class of suspended sediment, the error arising from inadequate sampling of the cross-stream spatial structure in suspended-sediment concentration depends only on the number of verticals collected, whereas the error arising from inadequate time averaging depends on both the number of verticals collected and the number of transits collected at each vertical. Summing these two errors in quadrature yields a total uncertainty in an equal-discharge-increment (EDI) or equal-width-increment (EWI) measurement of the time-averaged velocity-weighted suspended-sediment concentration in a river cross section (exclusive of any laboratory-processing errors). By virtue of how the number of verticals and transits influences the two individual errors within this total uncertainty, the error arising from inadequate time averaging slightly dominates that arising from inadequate sampling of the cross-stream spatial structure in suspended-sediment concentration. Adding verticals to an EDI or EWI measurement is slightly more effective in reducing the total uncertainty than adding transits only at each vertical, because a new vertical contributes both temporal and spatial information. However, because collection of depth-integrated samples at more transits at each vertical is generally easier and faster than at more verticals, addition of a combination of verticals and transits is likely a more practical approach to reducing the total uncertainty in most field situatio

Comparing the Accumulation of PCBs by Passive Samplers and Mussels from the Water Column at a Contaminated Sediment Site

EPA Science Inventory

Passive samplers, including semi-permeable membrane devices (SPMDs), solid phase microextraction (SPME) and polyethylene devices (PEDs), provide innovative tools for measuring hydrophobic organic contaminants (HOCs) originating from contaminated waters and sediments. Because the...

Parameterization of biogeochemical sediment-water fluxes using in-situ measurements and a steady-state diagenetic model

EPA Science Inventory

Diagenetic processes are important drivers of water column biogeochemistry in coastal areas. For example, sediment oxygen consumption can be a significant contributor to oxygen depletion in hypoxic systems, and sediment–water nutrient fluxes support primary productivity in ...

ASSESSMENT OF MERCURY IN HYPOLIMNETIC LAKE SEDIMENTS OF VERMONT AND NEW HAMPSHIRE

EPA Science Inventory

The research is to characterize concentrations of total methylmercury in waters and surficial sediments of Vermont and New Hampshire lakes, and to relate these data to commonly measured water column chemical parameters and watershed-level physical attributes. The primary goal of...

Central San Francisco Bay suspended-sediment transport processes and comparison of continuous and discrete measurements of suspended-solids concentrations

USGS Publications Warehouse

Schoellhamer, David H.

1996-01-01

Sediments are an important component of the San Francisco Bay estuarine system. Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles (Kuwabara and others, 1989; Domagalski and Kuivila, 1993). Sediments on the bottom of the bay provide the habitat for benthic communities that can ingest these substances and introduce them into the food web (Luoma and others, 1985). Nutrients, metals, and other substances are stored in bottom sediments and pore water in which chemical reactions occur and which provide an important source and/or sink to the water column (Hammond and others, 1985; Flegal and others, 1991). The transport and fate of suspended sediment is an important factor in determining the transport and fate of the constituents adsorbed on the sediment. Seasonal changes in sediment erosion and deposition patterns contribute to seasonal changes in the abundance of benthic macroinvertebrates (Nichols and Thompson, 1985). Tidal marshes are an ecologically important habitat that were created and are maintained by sedimentation processes (Atwater and others, 1979). In Suisun Bay, the maximum suspended-sediment concentration marks the position of the turbidity maximum, which is a crucial ecological region in which suspended sediment, nutrients, phytoplankton, zooplankton, larvae, and juvenile fish accumulate (Peterson and others, 1975; Arthur and Ball, 1979; Kimmerer, 1992; Jassby and Powell, 1994). Suspended sediments confine the photic zone to the upper part of the water column, and this limitation on light availability is a major control on phytoplankton production in San Francisco Bay (Cloern, 1987; Cole and Cloern, 1987). Suspended sediments also deposit in ports and shipping channels, which must be dredged to maintain navigation (U.S. Environmental Protection Agency, 1992).

Fate of 90Sr and U(VI) in Dounreay sediments following saline inundation and erosion.

PubMed

Eagling, Jane; Worsfold, Paul J; Blake, William H; Keith-Roach, Miranda J

2013-08-01

There is concern that sea level rise associated with projected climate change will lead to the inundation, flooding and erosion of soils and sediments contaminated with radionuclides at coastal nuclear sites, such as Dounreay (UK), with seawater. Here batch and column experiments were designed to simulate these scenarios and sequential extractions were used to identify the key radionuclide solid phase associations. Strontium was exchangeable and was mobilised rapidly by ion exchange with seawater Mg(2+) in both batch and column experiments. In contrast, U was more strongly bound to the sediments and mobilisation was initially limited by the influence of the sediment on the pH of the water. Release was only observed when the pH increased above 6.9, suggesting that the formation of soluble U(VI)-carbonate species was important. Under dynamic flow conditions, long term release was significant (47%), but controlled by slow desorption kinetics from a range of binding sites. Copyright © 2013 Elsevier Ltd. All rights reserved.

Diatom valve distribution and sedimentary fatty acid composition in Larsen Bay, Eastern Antarctica Peninsula

NASA Astrophysics Data System (ADS)

Sañé, E.; Isla, E.; Pruski, A. M.; Bárcena, M. A.; Vétion, G.; DeMaster, D.

2011-08-01

During austral summer 2006-2007, five sediment cores were recovered from the Eastern Antarctic Peninsula (EAP) continental shelf. Microscopic observations and sediment fatty acid (FA) composition analyses were carried out to investigate whether the drastic changes at the sea surface in EAP may be reflected in the sedimentary record. A sharp decrease in the number of diatom valves was observed below 2 cm depth. This difference between the upper 2 cm of sediment and the deeper part of the sediment column was attributed to the drastic change in the upper water column conditions after the collapse of the ice shelves, which allowed the arrival of phytoplankton debris and fresh organic matter to the sea floor in EAP. The presence of bacterial-, zooplankton- and detrital-related FA throughout EAP cores suggests that there has been an input of older and more refractory organic matter into the region, presumably by lateral transport before the Larsen ice shelves disintegration.

Vertical stratification of bacteria and archaea in sediments of a boreal stratified humic lake

NASA Astrophysics Data System (ADS)

Rissanen, Antti J.; Mpamah, Promise; Peura, Sari; Taipale, Sami; Biasi, Christina; Nykänen, Hannu

2015-04-01

Boreal stratified humic lakes, with steep redox gradients in the water column and in the sediment, are important sources of methane (CH4) to the atmosphere. CH4 flux from these lakes is largely controlled by the balance between CH4-production (methanogenesis), which takes place in the organic rich sediment and in the deepest water layers, and CH4-consumption (methanotrophy), which takes place mainly in the water column. While there is already some published information on the activity, diversity and community structure of bacteria in the water columns of these lakes, such information on sediment microbial communities is very scarce. This study aims to characterize the vertical variation patterns in the diversity and the structure of microbial communities in sediment of a boreal stratified lake. Particular focus is on microbes with the potential to contribute to methanogenesis (fermentative bacteria and methanogenic archaea) and to methanotrophy (methanotrophic bacteria and archaea). Two sediment cores (26 cm deep), collected from the deepest point (~6 m) of a small boreal stratified lake during winter-stratification, were divided into depth sections of 1 to 2 cm for analyses. Communities were studied from DNA extracted from sediment samples by next-generation sequencing (Ion Torrent) of polymerase chain reaction (PCR) - amplified bacterial and archaeal 16S rRNA gene amplicons. The abundance of methanogenic archaea was also specifically studied by quantitative-PCR of methyl coenzyme-M reductase gene (mcrA) amplicons. Furthermore, the community structure and the abundance of bacteria were studied by phospholipid fatty acid (PLFA) analysis. Dominant potential fermentative bacteria belonged to families Syntrophaceae, Clostridiaceae and Peptostreptococcaceae. There were considerable differences in the vertical distribution among these groups. The relative abundance of Syntrophaceae started to increase from the sediment surface, peaked at depth layer from 5 to 10 cm (up to 21 % of bacterial 16S rRNA gene amplicons) and decreased gradually towards deeper layers while the relative abundances of Clostridiaceae and Peptostreptococcaceae started to increase at deeper depths, at 5 cm and 10 cm, respectively, both peaking at depth layer from 20 to 26 cm (Clostridiaceae up to 13 % and Peptostreptococcaceae up to 11 % of bacterial 16S rRNA amplicons). Methanogenic community was dominated by acetoclastic methanogens (genus Methanosaeta), which were most abundant at depth layer from sediment surface to 10 cm (up to 87 % of archaeal 16S rRNA gene amplicons) and decreased drastically until the depth of 18 cm having quite stable relative abundance from 18 to 26 cm (5 to 11 % of archaeal 16S rRNA gene amplicons). Hydrogenotrophic methanogens (Methanoregula, Methanolinea, Methanospirillum, Methanocella) (3 to 11 % of archaeal 16S rRNA gene amplicons) did not show any specific depth patterns. The proportion of methanotrophic microbes was very low and they consisted almost completely of type II methanotrophic bacteria (family Methylocystaceae), which had highest relative abundance at depth layer from 5 to 10 cm (up to 3 % of bacterial 16S rRNA gene amplicons) and were almost absent below 15 cm. Anaerobic methanotrophic archaea were not detected. These findings will be discussed with results from PLFA and q-PCR analyses.

Fate of Metals in Relation to Water and Sediment Properties in a Subtropical Lake in Central Himalaya, India.

PubMed

Inaotombi, Shaikhom; Gupta, Prem Kumar

2017-04-01

Lakes of Himalaya are one of the most fragile ecosystems on earth. Tourism and urban development in the upland region strongly affect its water resources. The high rate of sedimentation and organic matter deposition alters the ecological state of sediment bed, which indirectly influences on dynamics of metallic elements. We investigated spatial and temporal variations of water and sediment characteristic in Lake Sattal of Central Himalaya, India. Samples were collected seasonally from four sampling locations from January 2011 to December 2012. Pearson's correlation and Canonical correspondence analysis (CCAs) were applied to examine the dynamics and behaviors of heavy metals. Concentrations of elements were in the order of fluoride (Fl) > zinc (Zn) > copper (Cu) > iron (Fe) > manganese (Mn). Sand size fraction was higher in the littoral zone while clay particle was dominant in the profundal zone of the lake. Dissolved oxygen at sediment-water-interface (SWI) and water temperature were the major factors influencing the dynamics of metallic contents in the water column. Spatially, total organic matter (TOM) was higher in the deeper portion of the lake. Our study revealed that mobility of Fe is temperature-dependent, whereas speciation of Mn and Cu are primarily controlled by the suboxic condition of SWI in organic-rich site. Upland lakes are more vulnerable to anoxic condition and have severe implications on heavy metals speciation. Proper implementation of land use policies and management practices, including stormwater detention, can be integrated into resolving such problems.

Occurrence of fecal-indicator bacteria and protocols for identification of fecal-contamination sources in selected reaches of the West Branch Brandywine Creek, Chester County, Pennsylvania

USGS Publications Warehouse

Cinotto, Peter J.

2005-01-01

The presence of fecal-indicator bacteria indicates the potential presence of pathogens originating from the fecal matter of warm-blooded animals. These pathogens are responsible for numerous human diseases ranging from common diarrhea to meningitis and polio. The detection of fecal-indicator bacteria and interpretation of the resultant data are, therefore, of great importance to water-resource managers. Current (2005) techniques used to assess fecal contamination within the fluvial environment primarily assess samples collected from the water column, either as grab samples or as depth- and (or) width-integrated samples. However, current research indicates approximately 99 percent of all bacteria within nature exist as attached, or sessile, bacteria. Because of this condition, most current techniques for the detection of fecal contamination, which utilize bacteria, assess only about 1 percent of the total bacteria within the fluvial system and are, therefore, problematic. Evaluation of the environmental factors affecting the occurrence and distribution of bacteria within the fluvial system, as well as the evaluation and modification of alternative approaches that effectively quantify the larger population of sessile bacteria within fluvial sediments, will present water-resource managers with more effective tools to assess, prevent, and (or) eliminate sources of fecal contamination within pristine and impaired watersheds. Two stream reaches on the West Branch Brandywine Creek in the Coatesville, Pa., region were studied between September 2002 and August 2003. The effects of sediment particle size, climatic conditions, aquatic growth, environmental chemistry, impervious surfaces, sediment and soil filtration, and dams on observed bacteria concentrations were evaluated. Alternative approaches were assessed to better detect geographic sources of fecal contamination including the use of turbidity as a surrogate for bacteria, the modification and implementation of sandbag bacteria samplers, and the use of optical brighteners. For the purposes of this report, sources of bacteria were defined as geographic locations where elevated concentrations of bacteria are observed within, or expected to enter, the main branch of the West Branch Brandywine Creek. Biologic sources (for example, waterfowl) were noted where applicable; however, no specific study of biologic sources (such as bacterial source tracking) was conducted. Data indicated that specific bacterial populations within fluvial sediments could be related to specific particle-size ranges. This relation is likely the result of the reduced porosity and permeability associated with finer sediments and the ability of specific bacteria to tolerate particular environments. Escherichia coli (E. coli) showed a higher median concentration (2,160 colonies per gram of saturated sediment) in the 0.125 to 0.5-millimeter size range of natural sediments than in other ranges, and enterococcus bacteria showed a higher median concentration (61,830 colonies per gram of saturated sediment) in the 0.062 to 0.25-millimeter size range of natural sediments than in other ranges. There were insufficient data to assess the particle-size relation to fecal coliform bacteria and (or) fecal streptococcus bacteria. Climatic conditions were shown to affect bacteria concentrations in both the water column and fluvial sediments. Drought conditions in 2002 resulted in lower overall bacteria concentrations than the more typically wet year of 2003. E. coli concentrations in fluvial sediment along the Coatesville study reach in 2002 had a median concentration of 92 colonies per gram of saturated sediment; in 2003, the median concentration had risen to 4,752 colonies per gram of saturated sediment. Symbiotic relations between bacteria and aquatic growth were likely responsible for increased bacteria concentrations observed within an impoundment area on the Coatesville study reach. This reach showed evidence of

Sediment toxicity assessment in the Lagoon of Venice (Italy) using Paracentrotus lividus (Echinodermata: Echinoidea) fertilization and embryo bioassays.

PubMed

Volpi Ghirardini, A; Arizzi Novelli, A; Tagliapietra, D

2005-09-01

The capacity of two toxicity bioassays (fertilization and embryo toxicity tests) to discriminate sediment toxicity using the sea urchin Paracentrotus lividus was tested in five stations with different levels of pollution in the Lagoon of Venice. Two stations were located in estuarine sites, two in the industrial zone, and one in a site at the top of our quality gradient (reference). Elutriate was chosen as sediment matrix to assess the potential effects of bioavailable pollutants in the water column as a consequence of sediment resuspension (dredging and dumping, fishing gear, etc.). An experimental design based on Quality Assurance/Quality Control procedures (QA/QC) was adopted in order to set the methodological basis for an effective use of these bioassays in monitoring programs. Results revealed both higher embriotoxicity than spermiotoxicity in all stations and the efficacy of combined use of both toxicity bioassays in discriminating differing pollution/bioavailability between stations and periods. The good representativeness of the integrated sampling scheme and the standardization of all experimental phases yielded high precision of results. Clear Toxicity Fingerprints were evidenced for the investigated sites through the combined use of both bioassays. A good fit between ecotoxicological data and chemical contamination levels was found, except for unnatural sediment texture.

Variability of suspended-sediment concentration at tidal to annual time scales in San Francisco Bay, USA

USGS Publications Warehouse

Schoellhamer, D.H.

2002-01-01

Singular spectrum analysis for time series with missing data (SSAM) was used to reconstruct components of a 6-yr time series of suspended-sediment concentration (SSC) from San Francisco Bay. Data were collected every 15 min and the time series contained missing values that primarily were due to sensor fouling. SSAM was applied in a sequential manner to calculate reconstructed components with time scales of variability that ranged from tidal to annual. Physical processes that controlled SSC and their contribution to the total variance of SSC were (1) diurnal, semidiurnal, and other higher frequency tidal constituents (24%), (2) semimonthly tidal cycles (21%), (3) monthly tidal cycles (19%), (4) semiannual tidal cycles (12%), and (5) annual pulses of sediment caused by freshwater inflow, deposition, and subsequent wind-wave resuspension (13%). Of the total variance 89% was explained and subtidal variability (65%) was greater than tidal variability (24%). Processes at subtidal time scales accounted for more variance of SSC than processes at tidal time scales because sediment accumulated in the water column and the supply of easily erodible bed sediment increased during periods of increased subtidal energy. This large range of time scales that each contained significant variability of SSC and associated contaminants can confound design of sampling programs and interpretation of resulting data.

Organic pollutants in the coastal environment off San Diego, California. 1: Source identification and assessment by compositional indices of polycyclic aromatic hydrocarbons

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zeng, E.Y.; Vista, C.L.

1997-02-01

Samples collected in January and June 1994 from the Point Loma Wastewater Treatment Plant (PLWTP) effluent, Tijuana River runoff, and microlayer, sediment trap, and surface sediment at several locations adjacent to the PLWTP outfall, mouth of the Tijuana River, and San Diego Bay were analyzed in an attempt to identify and assess the sources of hydrocarbon inputs into the coastal marine environment off San Diego. Several compositional indices of polycyclic aromatic hydrocarbons (PAHs), for example, alkyl homologue distributions, parent compound distributions, and other individual PAH ratios, were used to identify the sources of PAHs. Partially due to the decline ofmore » PAH emission from the PLWTP outfall, PAHs found in the sea surface microlayer, sediments, and water column particulates near the PLWTP outfall were predominantly derived from nonpoint sources. The sea microlayer near the mouth of the Tijuana River appeared to accumulate enhanced amounts of PAHs and total organic carbon and total nitrogen, probably discharged from the river, although they were in extremely low abundance in the sediments at the same location. Surprisingly, PAHs detected in the microlayer and sediments in San Diego Bay were mainly derived from combustion sources rather than oil spills, despite the heavy shipping activities in the area.« less

Contribution of phytoplankton and benthic microalgae to inner shelf sediments of the north-central Gulf of Mexico

NASA Astrophysics Data System (ADS)

Grippo, M. A.; Fleeger, J. W.; Rabalais, N. N.; Condrey, R.; Carman, K. R.

2010-03-01

Marine sediment may contain both settled phytoplankton and benthic microalgae (BMA). In river-dominated, shallow continental shelf systems, spatial, and temporal heterogeneity in sediment type and water-column characteristics (e.g., turbidity and primary productivity) may promote spatial variation in the relative contribution of these two sources to the sediment organic matter pool available to benthic consumers. Here we use photosynthetic pigment analysis and microscopic examination of sediment microalgae to investigate how the biomass, composition, and degradation state of sediment-associated microalgae vary along the Louisiana (USA) inner shelf, a region strongly influenced by the Mississippi River. Three sandy shoals and surrounding muddy sediments with depths ranging from 4 to 20 m were sampled in April, August, and October 2007. Pigment composition suggested that sediment microalgae were primarily diatoms at all locations. We found no significant differences in sediment chlorophyll a concentrations (8-77 mg m -2) at the shoal and off-shoal stations. Epipelic pennate diatoms (considered indicative of BMA) made up a significantly greater proportion of sediment diatoms at sandy (50-98%) compared to more silty off-shoal stations (16-56%). The percentage of centric diatoms (indicators of settled phytoplankton) in the sediment was highest in August. Sediment total pheopigment concentrations on sandy stations (<20 mg m -2) were significantly lower than concentrations at nearby muddy stations (>40 mg m -2), suggesting differences in sediment microalgal degradation state. These observations suggest that BMA predominate in shallow sandy sediments and that phytodetritus predominates at muddy stations. Our results also suggest that the relative proportion of phytodetritus in the benthos was highest where phytoplankton biomass in the overlying water was greatest, independent of sediment type. The high biomass of BMA found on shoals suggests that benthic primary production on sandy sediments represents a potentially significant local source of sediment microalgal carbon that may be utilized by benthic consumers in continental shelf food webs.

Sediment-hosted contaminants and distribution patterns in the Mississippi and Atchafalaya River Deltas

USGS Publications Warehouse

Flocks, James G.; Kindinger, Jack G.; Ferina, Nicholas; Dreher, Chandra

2002-01-01

The Mississippi and Atchafalaya Rivers transport very large amounts of bedload and suspended sediments to the deltaic and coastal environments of the northern Gulf of Mexico. Absorbed onto these sediments are contaminants that may be detrimental to the environment. To adequately assess the impact of these contaminants it is first necessary to develop an understanding of sediment distribution patterns in these deltaic systems. The distribution patterns are defined by deltaic progradational cycles. Once these patterns are identified, the natural and industrial contaminant inventories and their depositional histories can be reconstructed. Delta progradation is a function of sediment discharge, as well as channel and receiving-basin dimensions. Fluvial energy controls the sediment distribution pattern, resulting in a coarse grained or sandy framework, infilled with finer grained material occupying the overbank, interdistributary bays, wetlands and abandoned channels. It has been shown that these fine-grained sediments can carry contaminants through absorption and intern them in the sediment column or redistribute them depending on progradation or degradation of the delta deposit. Sediment distribution patterns in delta complexes can be determined through high-resolution geophysical surveys and groundtruthed with direct sampling. In the Atchafalaya and Mississippi deltas, remote sensing using High-Resolution Single-Channel Seismic Profiling (HRSP) and Sidescan Sonar was correlated to 20-ft vibracores to develop a near-surface geologic framework that identifies variability in recent sediment distribution patterns. The surveys identified bedload sand waves, abandoned-channel back-fill, prodelta and distributary mouth bars within the most recently active portions of the deltas. These depositional features respond to changes in deltaic processes and through their response may intern or transport absorbed contaminants. Characterizing these features provides insight into the fate of sediment-hosted contaminants.

Sedimentation of oil-derived material to the seabed is an unrecognized fate for oil derived from natural seepage.

NASA Astrophysics Data System (ADS)

Joye, S. B.

2016-02-01

The fate of oil derived from natural seepage in the marine environment is poorly constrained. In the aftermath of the 2010 BP/Macondo oil well blowout, sedimentation of oil-containing material to the seafloor was an important fate for discharged oil. Though the amount of oil accounted for by sedimentation processes remains poorly constrained, sedimentation is now considered an important fate of oil during large open water spills that generate extensive surface slicks. In the Gulf of Mexico, vigorous natural oil seeps generate extensive, sometimes thick, surface slicks. In the case of highly active seeps, these surface oil slicks persist at the sea surface over the seep site a majority of the time. We investigated the fate of oil released through natural seepage and the potential for the sedimentation of surface-slick derived oil at two vigorous hydrocarbon seeps in the Gulf of Mexico, Green Canyon block 600 and block 767. Hydrocarbon analyses were performed on samples collected from oil vents at the seafloor, in surface slicks, and in sediments cores apparently containing sedimented oil. Sediment cores collected from both of these active seep sites away from known oil vents contained distinct (1-3 cm thick) layers that were brown in coloration and which displayed distinct sedimentology compared to deeper strata. The oil fingerprint was also different, suggesting this material was not the result of weathering during transit through the sediment column. Available data suggest that sedimentation of weathered oil also occurs at vigorous natural seeps. Detailed studies of the weathered oil sedimentation process at natural seeps will help reveal the mechanisms driving this phenomena and are important for understanding the fate of oil released during accidental discharges and spills.

Role of physical heterogeneity in the interpretation of small-scale laboratory and field observations of bacteria, microbial-sized microsphere, and bromide transport through aquifer sediments

USGS Publications Warehouse

Harvey, Ronald W.; Kinner, Nancy E.; MacDonald, Dan; Metge, David W.; Bunn, Amoret

1993-01-01

The effect of physical variability upon the relative transport behavior of microbial-sized microspheres, indigenous bacteria, and bromide was examined in field and flow-through column studies for a layered, but relatively well sorted, sandy glaciofluvial aquifer. These investigations involved repacked, sieved, and undisturbed aquifer sediments. In the field, peak abundance of labeled bacteria traveling laterally with groundwater flow 6 m downgradient from point of injection was coincident with the retarded peak of carboxylated microspheres (retardation factor, RF = 1.7) at the 8.8 m depth, but preceded the bromide peak and the retarded microsphere peak (RF = 1.5) at the 9.0 m depth. At the 9.5 m depth, the bacterial peak was coincident with both the bromide and the microsphere peaks. Although sorption appeared to be a predominant mechanism responsible for immobilization of microbial-sized microspheres in the aquifer, straining appeared to be primarily responsible for their removal in 0.6-m-long columns of repacked, unsieved aquifer sediments. The manner in which the columns were packed also affected optimal size for microsphere transport, which in one experiment was near the size of the small (∼2 μm) groundwater protozoa (flagellates). These data suggest that variability in aquifer sediment structure can be important in interpretation of both small-scale field and laboratory experiments examining microbial transport behavior.

Multi-scale approach to the environmental factors effects on spatio-temporal variability of Chironomus salinarius (Diptera: Chironomidae) in a French coastal lagoon

NASA Astrophysics Data System (ADS)

Cartier, V.; Claret, C.; Garnier, R.; Fayolle, S.; Franquet, E.

2010-03-01

The complexity of the relationships between environmental factors and organisms can be revealed by sampling designs which consider the contribution to variability of different temporal and spatial scales, compared to total variability. From a management perspective, a multi-scale approach can lead to time-saving. Identifying environmental patterns that help maintain patchy distribution is fundamental in studying coastal lagoons, transition zones between continental and marine waters characterised by great environmental variability on spatial and temporal scales. They often present organic enrichment inducing decreased species richness and increased densities of opportunist species like C hironomus salinarius, a common species that tends to swarm and thus constitutes a nuisance for human populations. This species is dominant in the Bolmon lagoon, a French Mediterranean coastal lagoon under eutrophication. Our objective was to quantify variability due to both spatial and temporal scales and identify the contribution of different environmental factors to this variability. The population of C. salinarius was sampled from June 2007 to June 2008 every two months at 12 sites located in two areas of the Bolmon lagoon, at two different depths, with three sites per area-depth combination. Environmental factors (temperature, dissolved oxygen both in sediment and under water surface, sediment organic matter content and grain size) and microbial activities (i.e. hydrolase activities) were also considered as explanatory factors of chironomid densities and distribution. ANOVA analysis reveals significant spatial differences regarding the distribution of chironomid larvae for the area and the depth scales and their interaction. The spatial effect is also revealed for dissolved oxygen (water), salinity and fine particles (area scale), and for water column depth. All factors but water column depth show a temporal effect. Spearman's correlations highlight the seasonal effect (temperature, dissolved oxygen in sediment and water) as well as the effect of microbial activities on chironomid larvae. Our results show that a multi-scale approach identifies patchy distribution, even when there is relative environmental homogeneity.

Simultaneous Recovery of Extracellular and Intracellular DNA Suitable for Molecular Studies from Marine Sediments

PubMed Central

Corinaldesi, Cinzia; Danovaro, Roberto; Dell'Anno, Antonio

2005-01-01

The occurrence of high extracellular DNA concentrations in aquatic sediments (concentrations that are 3 to 4 orders of magnitude greater than those in the water column) might play an important role in biogeochemical cycling, as well as in horizontal gene transfer through natural transformation. Since isolation of extracellular DNA from sediments is a difficult and unsolved task, in this study we developed an efficient procedure to recover simultaneously DNA associated with microbial cells and extracellular DNA from the same sediment sample. This procedure is specifically suitable for studying extracellular DNA because it avoids any contamination with DNA released by cell lysis during handling and extraction. Applying this procedure to different sediment types, we obtained extracellular DNA concentrations that were about 10 to 70 times higher than the intracellular DNA concentrations. Using specific targeted prokaryotic primers, we obtained evidence that extracellular DNA recovered from different sediments did not contain amplifiable 16S rRNA genes. By contrast, using DNA extracted from microbial cells as the template, we always amplified 16S rRNA genes. Although 16S rRNA genes were not detected in extracellular DNA, analyses of the sizes of extracellular DNA indicated the presence of high-molecular-weight fragments that might have contained other gene sequences. This protocol allows investigation of extracellular DNA and its possible participation in natural transformation processes. PMID:15640168

Authigenic carbon entombed in methane-soaked sediments from the northeastern transform margin of the Guaymas Basin, Gulf of California

NASA Astrophysics Data System (ADS)

Paull, Charles K.; Ussler, William; Peltzer, Edward T.; Brewer, Peter G.; Keaten, Rendy; Mitts, Patrick J.; Nealon, Jeffrey W.; Greinert, Jens; Herguera, Juan-Carlos; Elena Perez, M.

2007-06-01

Extensive ROV-based sampling and exploration of the seafloor was conducted along an eroded transform-parallel fault scarp on the northeastern side of the Guaymas Basin in the Gulf of California to observe the nature of fluids venting from the seafloor, measure the record left by methane-venting on the carbonates from this area, and determine the association with gas hydrate. One gas vent vigorous enough to generate a water-column gas plume traceable for over 800 m above the seafloor was found to emanate from a ˜10-cm-wide orifice on the eroded scarp face. Sediment temperature measurements and topography on a sub-bottom reflector recorded in a transform-parallel seismic reflection profile identified a subsurface thermal anomaly beneath the gas vent. Active chemosynthetic biological communities (CBCs) and extensive authigenic carbonates that coalesce into distinct chemoherm structures were encountered elsewhere along the eroded transform-parallel scarp. The carbon isotopic composition of methane bubbles flowing vigorously from the gas vent (-53.6±0.8‰ PDB) is comparable to methane found in sediment cores taken within the CBCs distributed along the scarp (-51.9±8.1‰ PDB). However, the δ13C value of the CO 2 in the vent gas (+12.4±1.1‰ PDB) is very distinct from those for dissolved inorganic carbon (DIC) (-35.8‰ to -2.9‰ PDB) found elsewhere along the scarp, including underneath CBCs. The δ13C values of the carbonate-rich sediments and rocks exposed on the seafloor today also span an unusually large range (-40.9‰ to +12.9‰ PDB) and suggest two distinct populations of authigenic carbonate materials were sampled. Unconsolidated sediments and some carbonate rocks, which have lithologic evidence for near-seafloor formation, have negative δ13C values, while carbonate rocks that clearly formed in the subsurface have positive δ13C values (up to +23.0‰) close to that measured for CO 2 in the vent gas. There appears to be two carbon sources for the authigenic carbonates: (1) deeply-sourced, isotopically heavy CO 2 (˜+12‰); and (2) isotopically light DIC derived from local anaerobic oxidation of methane at the sulfate-methane interface in the shallow subsurface. Addition of isotopically light methane-derived carbon at the seafloor may completely mask the isotopically heavy CO 2 signature (+12.4‰) in the underlying sediments. Thus, the authigenic carbonates may have formed from the same methane- and carbon dioxide-bearing fluid, but under different migration and alteration conditions, depending on how it migrated through the sediment column.

Ordovician Jeleniów Claystone Formation of the Holy Cross Mountains, Poland - Reconstruction of Redox Conditions Using Pyrite Framboid Study

NASA Astrophysics Data System (ADS)

Smolarek, Justyna; Marynowski, Leszek; Trela, Wiesław

2014-09-01

The aim of this research is to reconstruct palaeoredox conditions during sedimentation of the Jeleniów Claystone Formation deposits, using framboid pyrite diameter measurements. Analysis of pyrite framboids diameter distribution is an effective method in the palaeoenvironmental interpretation which allow for a more detailed insight into the redox conditions, and thus the distinction between euxinic, dysoxic and anoxic conditions. Most of the samples is characterized by framboid indicators typical for anoxic/euxinic conditions in the water column, with average (mean) values ranging from 5.29 to 6.02 urn and quite low standard deviation (SD) values ranging from 1.49 to 3.0. The remaining samples have shown slightly higher values of framboid diameter typical for upper dysoxic conditions, with average values (6.37 to 7.20 um) and low standard deviation (SD) values (1.88 to 2.88). From the depth of 75.5 m till the shallowest part of the Jeleniów Claystone Formation, two samples have been examined and no framboids has been detected. Because secondary weathering should be excluded, the lack of framboids possibly indicates oxic conditions in the water column. Oxic conditions continue within the Wólka Formation based on the lack of framboids in the ZB 51.6 sample.

Ordovician Jeleniów Claystone Formation of the Holy Cross Mountains, Poland - Reconstruction of redox conditions using pyrite framboid study

NASA Astrophysics Data System (ADS)

Smolarek, Justyna; Marynowski, Leszek; Trela, Wiesław

2014-09-01

The aim of this research is to reconstruct palaeoredox conditions during sedimentation of the Jeleniów Claystone Formation deposits, using framboid pyrite diameter measurements. Analysis of pyrite framboids diameter distribution is an effective method in the palaeoenvironmental interpretation which allow for a more detailed insight into the redox conditions, and thus the distinction between euxinic, dysoxic and anoxic conditions. Most of the samples is characterized by framboid indicators typical for anoxic/euxinic conditions in the water column, with average (mean) values ranging from 5.29 to 6.02 μm and quite low standard deviation (SD) values ranging from 1.49 to 3.0. The remaining samples have shown slightly higher values of framboid diameter typical for upper dysoxic conditions, with average values (6.37 to 7.20 μm) and low standard deviation (SD) values (1.88 to 2.88). From the depth of 75.5 m till the shallowest part of the Jeleniów Claystone Formation, two samples have been examined and no framboids has been detected. Because secondary weathering should be excluded, the lack of framboids possibly indicates oxic conditions in the water column. Oxic conditions continue within the Wólka Formation based on the lack of framboids in the ZB 51.6 sample

Uranium speciation and stability after reductive immobilization in aquifer sediments

NASA Astrophysics Data System (ADS)

Sharp, Jonathan O.; Lezama-Pacheco, Juan S.; Schofield, Eleanor J.; Junier, Pilar; Ulrich, Kai-Uwe; Chinni, Satya; Veeramani, Harish; Margot-Roquier, Camille; Webb, Samuel M.; Tebo, Bradley M.; Giammar, Daniel E.; Bargar, John R.; Bernier-Latmani, Rizlan

2011-11-01

It has generally been assumed that the bioreduction of hexavalent uranium in groundwater systems will result in the precipitation of immobile uraninite (UO 2). In order to explore the form and stability of uranium immobilized under these conditions, we introduced lactate (15 mM for 3 months) into flow-through columns containing sediments derived from a former uranium-processing site at Old Rifle, CO. This resulted in metal-reducing conditions as evidenced by concurrent uranium uptake and iron release. Despite initial augmentation with Shewanella oneidensis, bacteria belonging to the phylum Firmicutes dominated the biostimulated columns. The immobilization of uranium (˜1 mmol U per kg sediment) enabled analysis by X-ray absorption spectroscopy (XAS). Tetravalent uranium associated with these sediments did not have spectroscopic signatures representative of U-U shells or crystalline UO 2. Analysis by microfocused XAS revealed concentrated micrometer regions of solid U(IV) that had spectroscopic signatures consistent with bulk analyses and a poor proximal correlation (μm scale resolution) between U and Fe. A plausible explanation, supported by biogeochemical conditions and spectral interpretations, is uranium association with phosphoryl moieties found in biomass; hence implicating direct enzymatic uranium reduction. After the immobilization phase, two months of in situ exposure to oxic influent did not result in substantial uranium remobilization. Ex situ flow-through experiments demonstrated more rapid uranium mobilization than observed in column oxidation studies and indicated that sediment-associated U(IV) is more mobile than biogenic UO 2. This work suggests that in situ uranium bioimmobilization studies and subsurface modeling parameters should be expanded to account for non-uraninite U(IV) species associated with biomass.

Benthic and Pelagic Pathways of Methylmercury Bioaccumulation in Estuarine Food Webs of the Northeast United States

PubMed Central

Chen, Celia Y.; Borsuk, Mark E.; Bugge, Deenie M.; Hollweg, Terill; Balcom, Prentiss H.; Ward, Darren M.; Williams, Jason; Mason, Robert P.

2014-01-01

Methylmercury (MeHg) is a contaminant of global concern that bioaccumulates and bioamagnifies in marine food webs. Lower trophic level fauna are important conduits of MeHg from sediment and water to estuarine and coastal fish harvested for human consumption. However, the sources and pathways of MeHg to these coastal fisheries are poorly known particularly the potential for transfer of MeHg from the sediment to biotic compartments. Across a broad gradient of human land impacts, we analyzed MeHg concentrations in food webs at ten estuarine sites in the Northeast US (from the Hackensack Meadowlands, NJ to the Gulf of Maine). MeHg concentrations in water column particulate material, but not in sediments, were predictive of MeHg concentrations in fish (killifish and Atlantic silversides). Moreover, MeHg concentrations were higher in pelagic fauna than in benthic-feeding fauna suggesting that MeHg delivery to the water column from methylation sites from within or outside of the estuary may be an important driver of MeHg bioaccumulation in estuarine pelagic food webs. In contrast, bulk sediment MeHg concentrations were only predictive of concentrations of MeHg in the infaunal worms. Our results across a broad gradient of sites demonstrate that the pathways of MeHg to lower trophic level estuarine organisms are distinctly different between benthic deposit feeders and forage fish. Thus, even in systems with contaminated sediments, transfer of MeHg into estuarine food webs maybe driven more by the efficiency of processes that determine MeHg input and bioavailability in the water column. PMID:24558491

Molybdenum Accumulation in Marine Sediments as an Indicator of Hypoxic Water Conditions (NACAETAC)

EPA Science Inventory

Direct monitoring of hypoxic water column conditions over large spatial and temporal extents is difficult due to the substantial logistical and financial investment required. Recent studies have indicated that concentrations of molybdenum (Mo) in marine sediments may serve as a u...

Microbial Communities in Sediments across the Louisiana Continental Shelf

EPA Science Inventory

The Louisiana continental Shelf (LCS) is a dynamic system that receives discharges from two large rivers. It has a stratified water column that is mixed by winter storms, hypoxic bottom water from spring to fall, and a muddy seafloor with highly mixed surficial sediments. Spatia...

Water or sediment? Partitioning the role of water column and sediment chemistry as drivers of macroinvertebrate communities in an austral South African stream.

PubMed

Dalu, Tatenda; Wasserman, Ryan J; Tonkin, Jonathan D; Mwedzi, Tongayi; Magoro, Mandla L; Weyl, Olaf L F

2017-12-31

Water pollution is a critical management issue, with many rivers and streams draining urban areas being polluted by the disposal of untreated solid waste and wastewater discharge, storm water and agricultural runoff. This has implications for biodiversity, and many rivers in the developing world are now considered compromised. We investigated benthic macroinvertebrate community structure and composition in relation to physico-chemical conditions of the water column and sediments. The study was conducted in an Austral catchment subject to both urban and agricultural pollutants in two different seasons. We assessed whether sediment characteristics were more important drivers of macroinvertebrate community composition than water column characteristics. We expected clear differences in macroinvertebrate community composition and in the associated community metrics due to distinct flow conditions between the two seasons. A combination of multivariate analyses (canonical correspondence analysis (CCA)) and biological indicator analysis were used to examine these patterns. Chironomidae was the most abundant family (>60%) in the upper mainstem river and stream sites. Stream sites were positively associated with CCA axis 2, being characterised by high turbidity and lower pH, salinity, phosphate concentration, channel width and canopy cover. Canopy cover, channel width, substrate embeddedness, phosphate concentration, pH, salinity and turbidity all had a significant effect on macroinvertebrate community composition. Using CCA variation partitioning, water quality was, however, a better predictor of benthic macroinvertebrate composition than sediment chemical conditions. Furthermore, our results suggest that seasonality had little effect on structuring benthic macroinvertebrate communities in this south-eastern zone of South Africa, despite clear changes in sediment chemistry. This likely reflects the relative lack of major variability in water chemistry compared to sediment chemistry between seasons and the relatively muted variability in precipitation between seasons than the more classic Austral temperate climates. Copyright © 2017 Elsevier B.V. All rights reserved.

Ecological risk assessment of the Assaluyeh and Bassatin estuaries (northern Persian Gulf) using sediment quality indices

NASA Astrophysics Data System (ADS)

Davoodi, Hamid; Gharibreza, Mohammadreza; Negarestan, Hossein; Mortazavi, Mohammad Sedigh; Lak, Razieh

2017-06-01

The Assaluyeh and Bassatin estuaries are located in Nayband Bay in the northern Persian Gulf, which faces long-term contamination and ecological risks. The research objectives of this study were designed to assess the ecological risks for human health and aquatic life and to evaluate impacts on environmental changes. Accordingly, an index analysis approach (using the contamination factor Cf, contamination degree Cd, potential ecological risk factor for individual metals Er, and potential ecological risk index for the basin, RI) in conjunction with the enrichment factor (Ef) and sediment quality levels (comprised of the threshold effect level, TEL, the probable effect level, PEL, and the effects range medium, ERM) were employed. In total, 147 sediment samples were tested to determine the content of organic matter and sulfur, as well as the concentrations of terrestrial and rare earth elements (REEs) and toxic metals, namely As, Cd, Cr, Cu, Ni and Hg, using inductively coupled plasma optical emission spectroscopy (ICP-OES). Gulf War oil spills in addition to oil and gas industries of the Pars South Especial Economic Zone (PSEEZ) were identified as the primary source of pollution in the study area. Gulf War contamination in the study area is highlighted by increased levels of Cd and RI at key horizons at 29 cm, 35 cm and 49 cm depth in the sedimentary columns of the Assaluyeh and Bassatin estuaries and Gavbandi River, respectively. Adverse effects of PSEEZ were revealed by increasing concentrations of toxic metals, P and S in the top 25-30 cm of the sedimentary columns. As a result, superficial sediments have been severely polluted by As, Ni, Cd, Cu and Cr, while the entire sedimentary column of the Assaluyeh estuary has been polluted by Hg. Based on the locations of the key horizons, the sedimentation rates of the previous decade at the Assaluyeh and Bassatin estuaries and the Gavbandi River were calculated to be 1.26 cm, 1.52 cm, and 2.13 cm, respectively. The capability of the index analysis approach, as well as of certain lanthanides, for highlighting environmental evolutionary trends in catchments in which extensive land use changes have occurred was demonstrated by the present investigation. The present research concluded that aquatic life and human health in the study area have been subjected to different ranges of hazards by toxic metals due to regional and local anthropogenic activities.

In situ time-series measurements of subseafloor sediment properties

USGS Publications Warehouse

Wheatcroft, R.A.; Stevens, A.W.; Johnson, R.V.

2007-01-01

The capabilities and diversity of subsurface sediment sensors lags significantly from what is available for the water column, thereby limiting progress in understanding time-dependent seabed exchange and high-frequency acoustics. To help redress this imbalance, a new instrument, the autonomous sediment profiler (ASP), is described herein. ASP consists of a four-electrode, Wenner-type resistivity probe and a thermistor that log data at 0.1-cm vertical intervals over a 58-cm vertical profile. To avoid resampling the same spot on the seafloor, the probes are moved horizontally within a 20 times 100-cm-2 area in one of three preselected patterns. Memory and power capacities permit sampling at hourly intervals for up to 3-mo duration. The system was tested in a laboratory tank and shown to be able to resolve high-frequency sediment consolidation, as well as changes in sediment roughness. In a field test off the southern coast of France, the system collected resistivity and temperature data at hourly intervals for 16 d. Coupled with environmental data collected on waves, currents, and suspended sediment, the ASP is shown to be useful for understanding temporal evolution of subsurface sediment porosity, although no large depositional or erosional events occurred during the deployment. Following a rapid decrease in bottom-water temperature, the evolution of the subsurface temperature field was consistent with the 1-D thermal diffusion equation coupled with advection in the upper 3-4 cm. Collectively, the laboratory and field tests yielded promising results on time-dependent seabed change.

Nitrate retention capacity of milldam-impacted legacy sediments and relict A horizon soils

NASA Astrophysics Data System (ADS)

Weitzman, Julie N.; Kaye, Jason P.

2017-05-01

While eutrophication is often attributed to contemporary nutrient pollution, there is growing evidence that past practices, like the accumulation of legacy sediment behind historic milldams, are also important. Given their prevalence, there is a critical need to understand how N flows through, and is retained in, legacy sediments to improve predictions and management of N transport from uplands to streams in the context of climatic variability and land-use change. Our goal was to determine how nitrate (NO3-) is cycled through the soil of a legacy-sediment-strewn stream before and after soil drying. We extracted 10.16 cm radius intact soil columns that extended 30 cm into each of the three significant soil horizons at Big Spring Run (BSR) in Lancaster, Pennsylvania: surface legacy sediment characterized by a newly developing mineral A horizon soil, mid-layer legacy sediment consisting of mineral B horizon soil and a dark, organic-rich, buried relict A horizon soil. Columns were first preincubated at field capacity and then isotopically labeled nitrate (15NO3-) was added and allowed to drain to estimate retention. The columns were then air-dried and subsequently rewet with N-free water and allowed to drain to quantify the drought-induced loss of 15NO3- from the different horizons. We found the highest initial 15N retention in the mid-layer legacy sediment (17 ± 4 %) and buried relict A soil (14 ± 3 %) horizons, with significantly lower retention in the surface legacy sediment (6 ± 1 %) horizon. As expected, rewetting dry soil resulted in 15N losses in all horizons, with the greatest losses in the buried relict A horizon soil, followed by the mid-layer legacy sediment and surface legacy sediment horizons. The 15N remaining in the soil following the post-drought leaching was highest in the mid-layer legacy sediment, intermediate in the surface legacy sediment, and lowest in the buried relict A horizon soil. Fluctuations in the water table at BSR which affect saturation of the buried relict A horizon soil could lead to great loses of NO3- from the soil, while vertical flow through the legacy-sediment-rich soil profile that originates in the surface has the potential to retain more NO3-. Restoration that seeks to reconnect the groundwater and surface water, which will decrease the number of drying-rewetting events imposed on the relict A horizon soils, could initially lead to increased losses of NO3- to nearby stream waters.

Characterization and modeling of sediment settling, consolidation, and suspension to optimize coastal Louisiana restoration

NASA Astrophysics Data System (ADS)

Sha, X.; Xu, K.; Bentley, S. J.; Robichaux, P. A.

2018-04-01

Many research efforts have been undertaken over many decades in the field of Louisiana coastal restoration, but long-term experiments for sediment suspension and consolidation in diversion-receiving basins are still limited, despite significance of this topic to ongoing restoration strategies. Sediment samples were collected from two active diversions on the Mississippi River: West Bay, a semi-enclosed bay located on the Mississippi River Delta and fed by the West Bay Diversion, and from Big Mar pond, a receiving basin of the Caernarvon freshwater diversion from the lower Mississippi River, Louisiana, USA. A dual-core Gust Erosion Microcosm System was used to measure time-series (0.5, 1, 2, 3, 4, 5, and 6-months after initial settling) erodibility at seven shear stress regimes (0.01-0.60 Pa) using experimental cores prepared with two initial sediment concentrations (60 and 120 kg m-3). A 230-cm tall settling column with nine sampling ports was used to measure the consolidation rates for initial sediment concentrations ranging from fluid mud (10 kg m-3) to dredge effluent (120 kg m-3), in combination with two levels of salinity (1 and 5). The erodibility of West Bay sediment decreased with increasing time of consolidation. The critical shear stress for resuspension increased from 0.2 Pa after 2 months to 0.45 Pa after 4 months of consolidation. The consolidation rates were inversely and exponentially related to initial sediment concentrations. Consolidation tests in salinity of 1 generally settled faster than that in salinity of 5, and consolidation tests with low sediment concentration tests generally settled faster than high-concentration tests. An exponential coefficient was added in the Sanford (2008) model to better predict the consolidation profile of both rapid early settling and slow self-weight consolidation processes. Our study suggests that enclosed basin, low salinity, relatively low sediment concentration and minimized disturbance for 4 months all favor of mud deposition and retention, and these factors should be considered in the design of coastal restoration projects such as dredging effluent placements and sediment diversions.

Nutrient cycling, connectivity, and free-floating plant abundance in backwater lakes of the Upper Mississippi River

USGS Publications Warehouse

Houser, Jeff N.; Giblin, Shawn M.; James, William F.; Langrehr, H.A.; Rogala, James T.; Sullivan, John F.; Gray, Brian R.

2013-01-01

River eutrophication may cause the formation of dense surface mats of free floating plants (FFP; e.g., duckweeds and filamentous algae) which may adversely affect the ecosystem. We investigated associations among hydraulic connectivity to the channel, nutrient cycling, FFP, submersed aquatic vegetation (SAV), and dissolved oxygen concentration (DO) in ten backwater lakes of the Upper Mississippi River (UMR) that varied in connectivity to the channel. Greater connectivity was associated with higher water column nitrate (NO3-N) concentration, higher rates of sediment phosphorus (P) release, and higher rates of NO3-N flux to the sediments. Rates of sediment P and N (as NH4-N) release were similar to those of eutrophic lakes. Water column nutrient concentrations were high, and FFP tissue was nutrient rich suggesting that the eutrophic condition of the UMR often facilitated abundant FFP. However, tissue nutrient concentrations, and the associations between FFP biomass and water column nutrient concentrations, suggested that nutrients constrained FFP abundance at some sites. FFP abundance was positively associated with SAV abundance and negatively associated with dissolved oxygen concentration. These results illustrate important connections among hydraulic connectivity, nutrient cycling, FFP, SAV, and DO in the backwaters of a large, floodplain river.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

This interim notice covers the following: extractable organic halides in solids, total organic halides, analysis by gas chromatography/Fourier transform-infrared spectroscopy, hexadecane extracts for volatile organic compounds, GC/MS analysis of VOCs, GC/MS analysis of methanol extracts of cryogenic vapor samples, screening of semivolatile organic extracts, GPC cleanup for semivolatiles, sample preparation for GC/MS for semi-VOCs, analysis for pesticides/PCBs by GC with electron capture detection, sample preparation for pesticides/PCBs in water and soil sediment, report preparation, Florisil column cleanup for pesticide/PCBs, silica gel and acid-base partition cleanup of samples for semi-VOCs, concentrate acid wash cleanup, carbon determination in solids using Coulometrics` CO{submore » 2} coulometer, determination of total carbon/total organic carbon/total inorganic carbon in radioactive liquids/soils/sludges by hot persulfate method, analysis of solids for carbonates using Coulometrics` Model 5011 coulometer, and soxhlet extraction.« less

Distribution, abundance and carbon isotopic composition of gaseous hydrocarbons in Big Soda Lake, Nevada - An alkaline, meromictic lake

NASA Technical Reports Server (NTRS)

Oremland, R. S.; Des Marais, D. J.

1983-01-01

The study of the distribution and isotopic composition of low molecular weight hydrocarbon gases at the Big Soda Lake, Nevada, has shown that while neither ethylene nor propylene were found in the lake, ethane, propane, isobutane and n-butane concentrations all increased with water column depth. It is concluded that methane has a biogenic origin in both the sediments and the anoxic water column, and that C2-C4 alkanes have biogenic origins in the monimolimnion water and shallow sediments. The changes observed in delta C-13/CH4/ and CH4/(C2H6 + C3H8) with depth in the water column and sedimeents are probably due to bacterial processes, which may include anaerobic methane oxidation and different rates of methanogenesis, and C2-to-C4 alkane production by microorganisms.

Cadmium Diagenesis in Polluted Sediments of a Tropical Estuary of SE Brazil

NASA Astrophysics Data System (ADS)

Patchineelam, S. R.; Metzger, E.; Jézéquel, D.; Sarazin, G.; Smoak, J. M.

2006-12-01

Sepetiba bay is a shallow semi enclosed water body located about 70km on the west side of the city of Rio de Janeiro with an area of 450km² separated from the Atlantic Ocean by a sand spit. Fishing, shrimp and tourism are important economic activities. During 35 years a Zinc/Cadmium smelter has polluted the bay. The objective of this investigation is to demonstrate how diagenetic processes are responsible for the cadmium remobilization out or fixation into the sediment column.. Two contrasting sites were selected to compare the diagenetic process. P1 located near to the smelter and P2 is about 20km away from the smelter next to a domestic effluents discharge into the bay. Peeper samplers with 25 cells with a resolution of 2,5cm were introduced into the sediment at both sites. After a period of 3 weeks equilibrium, the pore waters were separated from each cell and analyzed within 24 hours for alkalinity, H2S, NH3 and soluble phosphate by conventional methods An ICP-AES spectrometer was used to analyze Na, Mg, Li, Ba, Sr, Si, Fe and Mn. The total and labile Cd in pore waters were determined by differential-pulse stripping voltammetry. The solute profiles have revealed that the sediments at both sites were anoxic. The slopes of the ferrous and sulfide profile constituents permitted characterization the area at P1 as ferrous dominant with oxic conditions in the overlying water and P2 as a sulfidic rich environment with suboxic conditions in the water column. At P1 total dissolved Cd in the overlying water was about 450pM and labile fraction varied from 85 to 177pM. Just below the sediment water interface 695pM of total dissolved Cd was observed. Probably diagenetic processes are responsible for release of cadmium at the sediment interface. Below this maxima Cd concentrations decreased to 30pM. At P2 a concentration o of 150pM of total dissolved Cd was detected in the overlying water and samples in the pore waters at the sediment interface had an average concentration of 20pM. The downward diffusion of dissolved Cd in the pore water probably facilitated the formation of Cd sulfide or adsorption on particulate matter.

Iron and manganese oxide mineralization in the Pacific

USGS Publications Warehouse

Hein, J. R.; Koschinsky, A.; Halbach, P.; Manheim, F. T.; Bau, M.; Jung-Keuk, Kang; Lubick, N.

1997-01-01

Iron, manganese, and iron-manganese deposits occur in nearly all geomorphologic and tectonic environments in the ocean basins and form by one or more of four processes: (1) hydrogenetic precipitation from cold ambient seawater, (2) precipitation from hydrothermal fluids, (3) precipitation from sediment pore waters that have been modified from bottom water compositions by diagenetic reactions in the sediment column and (4) replacement of rocks and sediment. These processes are discussed.

Organic biomarkers in deep-sea regions affected by bottom trawling: pigments, fatty acids, amino acids and carbohydrates in surface sediments from the La Fonera (Palamós) Canyon, NW Mediterranean Sea

NASA Astrophysics Data System (ADS)

Sañé, E.; Martín, J.; Puig, P.; Palanques, A.

2012-12-01

Deep-sea ecosystems are in general adapted to a limited variability of physical conditions, resulting in high vulnerability and slow recovery rates from anthropogenic perturbations such as bottom trawling. Commercial trawling is the most recurrent and pervasive of human impacts on the deep-sea floor, but studies on its consequences on the biogeochemistry of deep-sea sediments are still scarce. Pigments, fatty acids, amino acids and carbohydrates were analyzed in sediments from the flanks of the La Fonera (Palamós) submarine canyon (NW Mediterranean Sea), where a commercial bottom trawling fishery has been active for more than 70 yr. More specifically, we investigated how trawling-induced sediment reworking affects the quality of sedimentary organic matter which reaches the seafloor and accumulates in the sediment column, which is fundamental for the development of benthic communities. Sediment samples were collected during two oceanographic cruises in spring and autumn 2011. The sampled sites included trawl fishing grounds as well as pristine (control) areas. We report that bottom trawling in the flanks of the La Fonera Canyon has caused an alteration of the quality of the organic matter accumulated in the upper 5 cm of the seafloor. The use of a wide pool of biochemical tracers characterized by different reactivity to degradation allowed us to discriminate the long-term effects of trawled-induced sediment reworking from the natural variability caused by the seasonal cycle of production and sinking of biogenic particles. Differences between untrawled and trawled areas were evidenced by labile amino acids, while differences between spring and autumn samples were detected only by the more labile indicators chlorophyll a and mono-unsaturated fatty acids. These results suggest that changes in the biochemical composition of the sedimentary organic matter caused by bottom trawling can be more relevant than those associated with natural seasonality and pose serious concerns about the ecological sustainability of deep-sea trawling activities.

Organic biomarkers in deep-sea regions affected by bottom trawling: pigments, fatty acids, amino acids and carbohydrates in surface sediments from the La Fonera (Palamós) Canyon, NW Mediterranean Sea

NASA Astrophysics Data System (ADS)

Sañé, E.; Martín, J.; Puig, P.; Palanques, A.

2013-12-01

Deep-sea ecosystems are in general adapted to a limited variability of physical conditions, resulting in high vulnerability and slow recovery rates from anthropogenic perturbations such as bottom trawling. Commercial trawling is the most recurrent and pervasive of human impacts on the deep-sea floor, but studies on its consequences on the biogeochemistry of deep-sea sediments are still scarce. Pigments, fatty acids, amino acids and carbohydrates were analysed in sediments from the flanks of the La Fonera (Palamós) submarine canyon (NW Mediterranean Sea), where a commercial bottom trawling fishery has been active for more than 70 yr. More specifically, we investigated how trawling-induced sediment reworking affects the quality of sedimentary organic matter which reaches the seafloor and accumulates in the sediment column, which is fundamental for the development of benthic communities. Sediment samples were collected during two oceanographic cruises in spring and autumn 2011. The sampled sites included trawl fishing grounds as well as pristine (control) areas. We report that bottom trawling in the flanks of the La Fonera Canyon has caused an alteration of the quality of the organic matter accumulated in the upper 5 cm of the seafloor. The use of a wide pool of biochemical tracers characterized by different reactivity to degradation allowed for us to discriminate the long-term effects of trawl-induced sediment reworking from the natural variability caused by the seasonal cycle of production and sinking of biogenic particles. Differences between untrawled and trawled areas were evidenced by labile amino acids, while differences between spring and autumn samples were detected only by the more labile indicators chlorophyll a and monounsaturated fatty acids. These results suggest that changes in the biochemical composition of the sedimentary organic matter caused by bottom trawling can be more relevant than those associated with natural seasonality and pose serious concerns about the ecological sustainability of deep-sea trawling activities.

Manganese and iron geochemistry in sediments underlying the redox-stratified Fayetteville Green Lake

NASA Astrophysics Data System (ADS)

Herndon, Elizabeth M.; Havig, Jeff R.; Singer, David M.; McCormick, Michael L.; Kump, Lee R.

2018-06-01

Manganese and iron are redox-sensitive elements that yield clues about biogeochemistry and redox conditions both in modern environments and in the geologic past. Here, we investigated Mn and Fe-bearing minerals preserved in basin sediments underlying Fayetteville Green Lake, a redox-stratified lake that serves as a geochemical analogue for Paleoproterozoic oceans. Synchrotron-source microprobe techniques (μXRF, μXANES, and μXRD) and bulk geochemical analyses were used to examine the microscale distribution and speciation of Mn, Fe, and S as a function of depth in the top 48 cm of anoxic lake sediments. Manganese was primarily associated with calcite grains as a manganese-rich carbonate that precipitated in the chemocline of the water column and settled through the euxinic basin to collect in lake sediments. Iron was preserved in framboidal iron sulfides that precipitated in euxinic bottom waters and underwent transformation to pyrite and marcasite in the sediments. Previous studies attribute the formation of manganese-rich carbonates to the diagenetic alteration of manganese oxides deposited in basins underlying oxygenated water. Our study challenges this paradigm by providing evidence that Mn-bearing carbonates form in the water column and accumulate in sediments below anoxic waters. Consequently, manganoan carbonates preserved in the rock record do not necessarily denote the presence of oxygenated bottom waters in ocean basins.

Assessing Organic Contaminant Fluxes from Contaminated Sediments Following Dam Removal in an Urbanized River

EPA Science Inventory

In this study, methods and approaches were developed and tested to assess changes in contaminant fluxes resulting from dam removal in a riverine system. Sediment traps and passive samplers were deployed to measure particulate and dissolved PAHs and PCBs in the water column prior...

Enrichment of stream water with fecal indicator organisms from bottom sediments during baseflow periods

USDA-ARS?s Scientific Manuscript database

Fecal indicator organisms (FIOs) are generally believed to be present in surface waters due solely to direct deposition of feces or through transport in runoff. However, emerging evidence points toward hyporheic exchange between sediment pore water and the overlying water column during baseflow peri...

NUTRIENT FLUXES IN THE MICROALGAL-DOMINATED INTERTIDAL REGIONS OF THE LOWER YAQUINA ESTUARY, OREGON (USA)

EPA Science Inventory

The effects of benthic microalgae on sediment nutrient fluxes were investigated at three sites across the intertidal zone of lower Yaquina Bay. Study sites were selected where microalgae were present but where seagrass and mud shrimp were absent. Sediment columns were collected...

Microphytobenthos production potential and contribution to bottom layer oxygen dynamics on the inner Louisiana continental shelf

EPA Science Inventory

To investigate the relative importance of microphytobenthos (MPB) oxygen (O2) production on a river-dominated shelf, we made sediment core incubation measurements of MPB O2 production and sediment O2 consumption, and compared these to water-column measures of primary production ...

E. coli release from streambed to water column during base flow periods: a modeling study

USDA-ARS?s Scientific Manuscript database

Microbial quality of stream water is important for recreation, irrigation, and other uses. It is usually evaluated by concentrations of fecal indicator bacteria (FIB) such as E. coli. Streambed sediments have been shown to harbor large FIB populations that could be released into the water column dur...

Seasonal ocean upwelling recorded by the late Miocene Pisco Formation diatomites of Peru

NASA Astrophysics Data System (ADS)

Gariboldi, Karen; Pike, Jennifer; Di Celma, Claudio; Malinverno, Elisa; Gioncada, Anna; Bianucci, Giovanni

2017-04-01

A 25-cm-thick sample of diatomaceous mudstone was collected in the whale fossil-bearing late Miocene Pisco Formation at Cerro Los Quesos in Peru. This macroscopically-laminated sample was divided into blocks and embedded in epoxy resin for light and scanning electron microscope (SEM) analysis. In only a few cases are laminae well preserved and, hence, useful for paleoenvironmental studies. In these few cases, a terrigenous lamina - Coscinodiscus ooze lamina - mixed lamina (Chaetoceros resting spores, Thalassionema, terrigenous material) sequence is observed. By comparison with Holocene sediment laminations from the Gulf of California, the late Miocene Peruvian triplet laminations are interpreted as an annual depositional cycle. The terrigenous lamina was deposited in the wet season (summer). Coscinodiscus ooze was the product of: (1) initial high summer primary production which took place at the thermocline during water column stratification; and (2) a subsequent 'Fall dump', or sedimentation, of the diatoms due to autumn storm-related mixing of the water column. Finally, the mixed lamina was deposited during/following the spring bloom. The frequent disruption or homogenisation of laminae observed in the slides was attributed to bioturbation by microbenthic organisms. This bioturbation was accompanied by a general absence of macrobenthos in the late Miocene diatomites of the Pisco Formation; such conditions are commonly interpreted as the consequence of a suboxic sea floor environment. In this presentation we will demonstrate the seasonal nature of the Late Miocene Pisco Formation diatomites and show novel SEM microelemental maps that help interpreting the paleonvironmental conditions at the sea floor at the time of diatomites deposition.

Hydrogen sulfide production and volatilization in a polymictic eutrophic saline lake, Salton Sea, California.

PubMed

Reese, Brandi Kiel; Anderson, Michael A; Amrhein, Christopher

2008-11-15

The Salton Sea is a large shallow saline lake located in southern California that is noted for high sulfate concentrations, substantial algal productivity, and very warm water column temperatures. These conditions are well-suited for sulfide production, and sulfide has been implicated in summer fish kills, although no studies have been conducted to specifically understand hydrogen sulfide production and volatilization there. Despite polymictic mixing patterns and relatively short accumulation periods, the amount of sulfide produced is comparable to meromictic lakes. Sulfide levels in the Salton Sea reached concentrations of 1.2 mmol L(-1) of total free sulfide in the hypolimnion and 5.6 mmol L(-1) in the sediment pore water. Strong winds in late July mixed H2S into the surface water, where it depleted the entire water column of dissolved oxygen and reached a concentration of 0.1 mmol L(-1). Sulfide concentrations exceeded the toxicity threshold of tilapia (Oreochromis mossambicus) and combined with strong anoxia throughout the water column, resulted in a massive fish kill. The mixing of sulfide into the surface waters also increased atmospheric H2S concentrations, reaching 1.0 micromol m(-3). The flux of sulfide from the sediment into the water column was estimated to range from 2-3 mmol m(-2) day(-1) during the winter and up to 8 mmol m(-2) day(-1) during the summer. Application of the two-layer model for volatilization indicates that up to 19 mmol m(-2) day(-1) volatilized from the surface during the mixing event. We estimate that as much as 3400 Mg year(-1) or approximately 26% of sulfide that diffused into the water column from the deepest sediments may have been volatilized to the atmosphere.

Dependence of stratocumulus-topped boundary-layer entrainment on cloud-water sedimentation: Impact on global aerosol indirect effect in GISS ModelE3 single column model and global simulations

NASA Astrophysics Data System (ADS)

Ackerman, A. S.; Kelley, M.; Cheng, Y.; Fridlind, A. M.; Del Genio, A. D.; Bauer, S.

2017-12-01

Reduction in cloud-water sedimentation induced by increasing droplet concentrations has been shown in large-eddy simulations (LES) and direct numerical simulation (DNS) to enhance boundary-layer entrainment, thereby reducing cloud liquid water path and offsetting the Twomey effect when the overlying air is sufficiently dry, which is typical. Among recent upgrades to ModelE3, the latest version of the NASA Goddard Institute for Space Studies (GISS) general circulation model (GCM), are a two-moment stratiform cloud microphysics treatment with prognostic precipitation and a moist turbulence scheme that includes an option in its entrainment closure of a simple parameterization for the effect of cloud-water sedimentation. Single column model (SCM) simulations are compared to LES results for a stratocumulus case study and show that invoking the sedimentation-entrainment parameterization option indeed reduces the dependence of cloud liquid water path on increasing aerosol concentrations. Impacts of variations of the SCM configuration and the sedimentation-entrainment parameterization will be explored. Its impact on global aerosol indirect forcing in the framework of idealized atmospheric GCM simulations will also be assessed.

Distribution and bioaccumulation of selenium in aquatic microcosms

USGS Publications Warehouse

Besser, John M.; Huckins, James N.; Little, Edward E.; La Point, Thomas W.

1989-01-01

Closed-system microcosms were used to study factors affecting the fate of selenium (Se) in aquatic systems. Distribution and bioaccumulation of Se varied among sediment types and Se species. A mixture of dissolved 75Se species (selenate, selenite and selenomethionine) was sorbed more rapidly to fine-textured, highly organic pond sediments than to sandy riverine sediments. Sulfate did not affect the distribution and bioaccumulation of 75Se over the range 80–180 mg SO4 liter−1. When each Se species was labeled separately, selenomethionine was lost from the water column more rapidly than selenate or selenite. Selenium lost from the water column accumulated primarily in sediments, but volatilization was also an important pathway for loss of Se added as selenomethionine. Loss rates of dissolved Se residues were more rapid than rates reported from mesocosm and field studies, suggesting that sediment: water interactions are more important in microcosms than in larger test systems. Daphnids accumulated highest concentrations of Se, followed by periphyton and macrophytes. Selenium added as selenomethionine was bioaccumulated preferentially compared to that added as selenite or selenate. Organoselenium compounds such as selenomethione may thus contribute disproportionately to Se bioaccumulation and toxicity in aquatic organisms.

Methylation of inorganic mercury in polar marine waters

NASA Astrophysics Data System (ADS)

Lehnherr, Igor; St. Louis, Vincent L.; Hintelmann, Holger; Kirk, Jane L.

2011-05-01

Monomethylmercury is a neurotoxin that accumulates in marine organisms, with serious implications for human health. The toxin is of particular concern to northern Inuit peoples, for example, whose traditional diets are composed primarily of marine mammals and fish. The ultimate source of monomethylmercury to marine organisms has remained uncertain, although various potential sources have been proposed, including export from coastal and deep-sea sediments and major river systems, atmospheric deposition and water-column production. Here, we report results from incubation experiments in which we added isotopically labelled inorganic mercury and monomethylmercury to seawater samples collected from a range of sites in the Canadian Arctic Archipelago. Monomethylmercury formed from the methylation of inorganic mercury in all samples. Demethylation of monomethylmercury was also observed in water from all sites. We determined steady-state concentrations of monomethylmercury in marine waters by incorporating the rate constants for monomethylmercury formation and degradation derived from these experiments into a numerical model. We estimate that the conversion of inorganic mercury to monomethylmercury in the water column accounts for around 47% (+/-62%, standard deviation) of the monomethylmercury present in polar marine waters, with site-to-site differences in inorganic mercury and monomethylmercury levels accounting for most of the variability. We suggest that water-column methylation of inorganic mercury is a significant source of monomethylmercury in pelagic marine food webs in the Arctic, and possibly in the world's oceans in general.

Determination of nonylphenol and nonylphenol ethoxylates in environmental solid samples by ultrasonic-assisted extraction and high performance liquid chromatography-fluorescence detection.

PubMed

Núñez, L; Turiel, E; Tadeo, J L

2007-04-06

A simple and rapid analytical method for the determination of nonylphenol (NP) and nonylphenol ethoxylates (NPEOx) in solid environmental samples has been developed. This method combines an ultrasonic-assisted extraction procedure in small columns and an enrichment step onto C(18) solid-phase extraction cartridges prior to separation using HPLC with fluorescence detection. Method optimization was carried out using soil samples fortified at different concentration levels (from 0.1 to 100 microg/g). Under optimum conditions, 2g of soil was placed in small glass columns and extraction was performed assisted by sonication (SAESC) at 45 degrees C in two consecutive steps of 15 min using a mixture of H(2)O/MeOH (30/70). The obtained extracts were collected, loaded onto 500 mg C(18) cartridges, and analytes were eluted with 3 x 1 ml of methanol and 1 ml of acetonitrile. Finally, sample extracts were evaporated under a nitrogen stream, redissolved in 500 microl H(2)O/AcN (50/50), and passed though a 0.45 microm nylon filter before final determination by HPLC-FL. The developed procedure allowed to achieve quantitative recoveries for NP and NPEOx, and was properly validated. Finally, the method was applied to the determination of these compounds in soils and other environmental solid samples such as sediments, compost and sludge.

Molybdenum isotope fractionation and speciation in a euxinic lake—Testing ways to discern isotope fractionation processes in a sulfidic setting

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dahl, Tais W.; Wirth, Stefanie B.

The molybdenum (Mo) isotope composition in euxinic shales has been used as a proxy for the global distribution of anoxic conditions in ancient oceans, and since more recently also as a proxy for sulfide concentrations in depositional environments. However, there is currently no way to distinguish isotope fractionation at low bottom water sulfide concentrations in ‘local’ basins from ‘global’ secular isotope variations associated with changing seawater composition. This uncertainty is challenging the use of Mo isotopes for paleoceanographic reconstructions. To explore this further, we present new data from sediments deposited over the past ~ 9800 years in one of themore » best studied euxinic localities in the world: Lake Cadagno in Switzerland. The sample set allows us to test ways to discern isotope fractionation processes at play in a highly restricted euxinic basin. Most of our drill core samples (n = 18) show high δ98Mo values similar to previously studied shallow sediments, indicative of quantitative Mo removal from the water column (Dahl et al. 2010a). However, a few samples (n = 3) deposited between about 1200 and 3400 years ago carry low δ98Mo values and have been isotopically fractionated in the lake. Sedimentological and geochemical characterizations show that these δ98Mo-fractionated sediments formed during times of frequent injection of O2- and sediment-rich river water into the deep sulfidic water column. A positive correlation between δ98Mo and sedimentary Mo contents suggests that isotope fractionation occurred during times of non-quantitative Mo removal, although Mn-oxide cycling at the chemocline might also contribute a subordinate proportion of (98Mo-depleted) molybdenum into the sulfidic zone. Sedimentary Mo/U enrichments relative to oxic lake water further supports the hypothesis that a particulate Mo shuttle was most efficient during times of quantitative Mo removal. Therefore, periods with inefficient Mo capture are ascribed to incomplete conversion of molybdate to particle reactive Mo species when bottom water H2S levels were low or less stable than today. Using XAFS spectroscopy, we found that the two distinct Mo compounds predominating in the sediments (MoIV-S and MoVI-OS) are not diagnostic for isotope fractionation that has occurred in Lake Cadagno. Instead, we infer that δ98Mo-fractionated products (forming via a low-sulfide Mo pathway) can be subsequently altered with little or no isotopic imprint during remobilization and re-precipitation (e.g., at higher sulfide levels in the sediments) as well as during post-depositional oxidation. Future work could investigate local δ98Mo-fractionation processes expressed in other euxinic settings and explore other sedimentary metrics to constrain the steps involved in the euxinic burial pathway(s). One tantalizing prospect of this is to distinguish between local bottomwater sulfide levels and variations in the fraction of global seafloor anoxia from the Mo isotope composition in ancient euxinic mudrocks.« less

Effects of sediment burial on grass carp, Ctenopharyngodon idella (Valenciennes,1844), eggs

USGS Publications Warehouse

George, Amy E.; Chapman, Duane C.; Deters, Joseph E.; Erwin, Susannah O.; Hayer, Cari-Ann

2015-01-01

It is thought that grass carp (Ctenopharyngodon idella) eggs must remain suspended in the water column in order to hatch successfully. Using sand, the effects of varying sediment levels on grass carp eggs were tested at different developmental states and temperatures. Survival was high (15–35%, depending on temperature and trial) in the unburied treatment where eggs rested on a sand bed but were not covered by sediment. Survival was lower in the partial burial (5–10%) and very low (0–4%) in the full burial treatment. In all treatments, delayed hatching (organisms remaining in membranes past the stage of hatching competence) was noted. Deformities such as missing heads and pericardial edema occurred at high rates in the partial and full burials. Eggs that come in contact with the benthos and are resuspended in the water column should be considered in embryonic drift models.

Upscaling of U (VI) desorption and transport from decimeter‐scale heterogeneity to plume‐scale modeling

USGS Publications Warehouse

Curtis, Gary P.; Kohler, Matthias; Kannappan, Ramakrishnan; Briggs, Martin A.; Day-Lewis, Frederick D.

2015-01-01

Scientifically defensible predictions of field scale U(VI) transport in groundwater requires an understanding of key processes at multiple scales. These scales range from smaller than the sediment grain scale (less than 10 μm) to as large as the field scale which can extend over several kilometers. The key processes that need to be considered include both geochemical reactions in solution and at sediment surfaces as well as physical transport processes including advection, dispersion, and pore-scale diffusion. The research summarized in this report includes both experimental and modeling results in batch, column and tracer tests. The objectives of this research were to: (1) quantify the rates of U(VI) desorption from sediments acquired from a uranium contaminated aquifer in batch experiments;(2) quantify rates of U(VI) desorption in column experiments with variable chemical conditions, and(3) quantify nonreactive tracer and U(VI) transport in field tests.

Methane release from sediment seeps to the atmosphere is counteracted by highly active Methylococcaceae in the water column of deep oligotrophic Lake Constance.

PubMed

Bornemann, Maren; Bussmann, Ingeborg; Tichy, Lucas; Deutzmann, Jörg; Schink, Bernhard; Pester, Michael

2016-08-01

Methane emissions from freshwater environments contribute substantially to global warming but are under strong control of aerobic methane-oxidizing bacteria. Recently discovered methane seeps (pockmarks) in freshwater lake sediments have the potential to bypass this control by their strong outgassing activity. Whether this is counteracted by pelagic methanotrophs is not well understood yet. We used a (3)H-CH4-radiotracer technique and pmoA-based molecular approaches to assess the activity, abundance and community structure of pelagic methanotrophs above active pockmarks in deep oligotrophic Lake Constance. Above profundal pockmarks, methane oxidation rates (up to 458 nmol CH4 l(-1) d(-1)) exceeded those of the surrounding water column by two orders of magnitude and coincided with maximum methanotroph abundances of 0.6% of the microbial community. Phylogenetic analysis indicated a dominance of members of the Methylococcaceae in the water column of both, pockmark and reference sites, with most of the retrieved sequences being associated with a water-column specific clade. Communities at pockmark and reference locations also differed in parts, which was likely caused by entrainment of sediment-hosted methanotrophs at pockmark sites. Our results show that the release of seep-derived methane to the atmosphere is counteracted by a distinct methanotrophic community with a pronounced activity throughout bottom waters. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Technological advances in suspended-sediment surrogate monitoring

NASA Astrophysics Data System (ADS)

Gray, John R.; Gartner, Jeffrey W.

2009-04-01

Surrogate technologies to continuously monitor suspended sediment show promise toward supplanting traditional data collection methods requiring routine collection and analysis of water samples. Commercially available instruments operating on bulk optic (turbidity), laser optic, pressure difference, and acoustic backscatter principles are evaluated based on cost, reliability, robustness, accuracy, sample volume, susceptibility to biological fouling, and suitable range of mass concentration and particle size distribution. In situ turbidimeters are widely used. They provide reliable data where the point measurements can be reliably correlated to the river's mean cross section concentration value, effects of biological fouling can be minimized, and concentrations remain below the sensor's upper measurement limit. In situ laser diffraction instruments have similar limitations and can cost 6 times the approximate $5000 purchase price of a turbidimeter. However, laser diffraction instruments provide volumetric-concentration data in 32 size classes. Pressure differential instruments measure mass density in a water column, thus integrating substantially more streamflow than a point measurement. They are designed for monitoring medium-to-large concentrations, are generally unaffected by biological fouling, and cost about the same as a turbidimeter. However, their performance has been marginal in field applications. Acoustic Doppler profilers use acoustic backscatter to measure suspended sediment concentrations in orders of magnitude more streamflow than do instruments that rely on point measurements. The technology is relatively robust and generally immune to effects of biological fouling. Cost of a single-frequency device is about double that of a turbidimeter. Multifrequency arrays also provide the potential to resolve concentrations by clay silt versus sand size fractions. Multifrequency hydroacoustics shows the most promise for revolutionizing collection of continuous suspended sediment data by instruments that require only periodic calibration for correlation to mean concentrations in river cross sections. Broad application of proven suspended sediment surrogate technologies has the potential to revolutionize fluvial sediment monitoring. Once applied, benefits could be enormous, providing for safer, more frequent and consistent, arguably more accurate, and ultimately less expensive sediment data for managing the world's sedimentary resources.

Technological advances in suspended‐sediment surrogate monitoring

USGS Publications Warehouse

Gray, John R.; Gartner, Jeffrey W.

2009-01-01

Surrogate technologies to continuously monitor suspended sediment show promise toward supplanting traditional data collection methods requiring routine collection and analysis of water samples. Commercially available instruments operating on bulk optic (turbidity), laser optic, pressure difference, and acoustic backscatter principles are evaluated based on cost, reliability, robustness, accuracy, sample volume, susceptibility to biological fouling, and suitable range of mass concentration and particle size distribution. In situ turbidimeters are widely used. They provide reliable data where the point measurements can be reliably correlated to the river's mean cross section concentration value, effects of biological fouling can be minimized, and concentrations remain below the sensor's upper measurement limit. In situ laser diffraction instruments have similar limitations and can cost 6 times the approximate $5000 purchase price of a turbidimeter. However, laser diffraction instruments provide volumetric‐concentration data in 32 size classes. Pressure differential instruments measure mass density in a water column, thus integrating substantially more streamflow than a point measurement. They are designed for monitoring medium‐to‐large concentrations, are generally unaffected by biological fouling, and cost about the same as a turbidimeter. However, their performance has been marginal in field applications. Acoustic Doppler profilers use acoustic backscatter to measure suspended sediment concentrations in orders of magnitude more streamflow than do instruments that rely on point measurements. The technology is relatively robust and generally immune to effects of biological fouling. Cost of a single‐frequency device is about double that of a turbidimeter. Multifrequency arrays also provide the potential to resolve concentrations by clay silt versus sand size fractions. Multifrequency hydroacoustics shows the most promise for revolutionizing collection of continuous suspended sediment data by instruments that require only periodic calibration for correlation to mean concentrations in river cross sections. Broad application of proven suspended sediment surrogate technologies has the potential to revolutionize fluvial sediment monitoring. Once applied, benefits could be enormous, providing for safer, more frequent and consistent, arguably more accurate, and ultimately less expensive sediment data for managing the world's sedimentary resources.

Hydrologic and Temporal Influences of Evaporite Minerals on the Vertical Distribution, Storage, and Mobility of Uranium

NASA Astrophysics Data System (ADS)

Roycroft, S. J.; Noel, V.; Boye, K.; Besancon, C.; Weaver, K. L.; Johnson, R. H.; Dam, W. L.; Fendorf, S. E.; Bargar, J.

2016-12-01

Uranium contaminated groundwater in Riverton, Wyoming persists despite anticipated natural attenuation outside of a former uranium ore processing facility. The inability of natural flushing to dilute the uranium below the regulatory threshold indicates that sediments act as secondary sources likely (re)supplying uranium to groundwater. Throughout the contaminated floodplain, uranium rich-evaporites are readily abundant in the upper 2 m of sediments and are spatially coincident with the location of the plume, which suggests a likely link between evaporites and increased uranium levels. Knowledge of where and how uranium is stored within evaporite-associated sediments is required to understand processes controlling the mobility of uranium. We expect that flooding and seasonal changes in hydrologic conditions will affect U phase partitioning, and thus largely control U mobility. The primary questions we are addressing in this project are: What is the relative abundance of uranium incorporated in various mineral complexes throughout the evaporite sediments? How do the factors of depth, location, and seasonality influence the relative incorporation, mobility and speciation of uranium?We have systematically sampled from two soil columns over three dates in Riverton. The sampling dates span before and after a significant flooding event, providing insight into the flood's impact on local uranium mobility. Sequential chemical extractions are used to decipher the reactivity of uranium and approximate U operationally defined within reactants targeting carbonate, silicate, organic, and metal oxide bound or water and exchangeable phases. Extractions throughout the entirety of the sediment cores provide a high-resolution vertical profile of the distribution of uranium in various extracted phases. Throughout the profile, the majority (50-60%) of uranium is bound within carbonate-targeted extracts, a direct effect of the carbonate-rich evaporite sediments. The sum of our analyses provide a dynamic model of uranium incorporation within evaporite sediments holding implications for the fate of uranium throughout contaminated sites across the Colorado River Basin.

Geoelectrical Evidence of Microbial Degradation of Diesel Contaminated Sediments

NASA Astrophysics Data System (ADS)

Werkema, D. D.; Atekwana, E. A.; Rossbach, S.; Sauck, W. A.

2003-12-01

The alteration of physical properties by microbial activity in petroleum contaminated sediments was investigated using geophysical techniques in laboratory column experiments. Microbial population growth was determined by the Most Probable Number technique (MPN), community dynamics were determined by the rDNA intergenic spacer analysis (RISA), microbial mineralization of diesel fuel was assessed using dissolved inorganic carbon (DIC), enhanced mineral dissolution was determined by dissolved calcium, and the vertical geoelectrical profile was measured using DC resistivity (converted to conductivity). The columns simulated a saturation profile and contained sanitized, uniform sand with the following experimental treatments: diesel + microbes, diesel, microbes, and no treatment. After 16 months, two important conclusions were drawn. First, the relative increase in magnitude of the parameters measured was highest in the diesel + microbe column (showing at least 110% increase), lower in the diesel column and lowest (actually showing a decrease) in the column with no treatment. Further, the diesel + microbe column showed the greatest increase in oil degrading microbial populations (135%) compared to the column with no treatment, which showed no changes. Secondly, the depth at which the conductivity reached the maximum occurred within and slightly above the diesel layer (which represents a depth that was originally water wet). It was further observed that the relative change in bulk conductivity below the saturated zone is of a lower magnitude than above (<10%). These results suggest the diesel layer, and the zone slightly above, were the most biologically active. Additionally, the diesel + microbe column showed RISA fragments attributed to microbial succession typically observed in organic contaminant plumes. A simple Archie's Law analysis was used to estimate the pore water conductivities necessary to reproduce the bulk conductivity measured. This analysis shows that relative to the column with only microbes (selected as the control to be most representative of field conditions), the diesel column revealed a 2.3 fold increase and the diesel + microbe column showed a 3 fold increase in pore water conductivity. This increase was located within the diesel layer above the water saturated zone. Within the saturated zone, the no treatment column showed a 0.81 fold increase, the diesel column a 1.28, and the diesel + microbe column 1.45. We conclude from this study that microbial activity and the resultant biogeochemical changes played an important role in modifying the geoelectrical properties of aquifers and sediments rich in organic carbon and mineralized by bacteria by increasing the bulk conductivity. This conductive zone occurred within and immediately above the free-phase petroleum layer. In natural environments with high concentrations of organic compounds available as electron donors, geophysical techniques may potentially be used as indicators of microbial activity. Notice: This is an abstract of a proposed presentation and does not necessarily reflect the United States Environmental Protection Agency (EPA) policy. The actual presentation has not been peer reviewed by EPA. Mention of trade names or commercial products does not constitute endorsement or recommendation for use.

Controls on the barium isotope compositions of marine sediments

NASA Astrophysics Data System (ADS)

Bridgestock, Luke; Hsieh, Yu-Te; Porcelli, Donald; Homoky, William B.; Bryan, Allison; Henderson, Gideon M.

2018-01-01

The accumulation of barium (Ba) in marine sediments is considered to be a robust proxy for export production, although this application can be limited by uncertainty in BaSO4 preservation and sediment mass accumulation rates. The Ba isotope compositions of marine sediments could potentially record insights into past changes in the marine Ba cycle, which should be insensitive to these limitations, enabling more robust interpretation of sedimentary Ba as a proxy. To investigate the controls on the Ba isotope compositions of marine sediments and their potential for paleo-oceanographic applications, we present the first Ba isotope compositions results for sediments, as well as overlying seawater depth profiles collected in the South Atlantic. Variations in Ba isotope compositions of the sediments predominantly reflect changes in the relative contributions of detrital and authigenic Ba sources, with open-ocean sediments constraining the isotope composition of authigenic Ba to be δ 138/134Ba ≈ + 0.1 ‰. This value is consistent with the average isotope composition inferred for sinking particulate Ba using simple mass balance models of Ba in the overlying water column and is hypothesized to reflect the removal of Ba from the upper water column with an associated isotopic fractionation of Δ diss-part 138/134Ba ≈ + 0.4 to +0.5. Perturbations to upper ocean Ba cycling, due to changes in export production and the supply of Ba via upwelling, should therefore be recorded by the isotope compositions of sedimentary authigenic Ba. Such insights will help to improve the reliable application of Ba accumulation rates in marine sediments as a proxy for past changes in export production.

Tidal asymmetry and variability of bed shear stress and sediment bed flux at a site in San Francisco Bay, USA

USGS Publications Warehouse

Brennan, Matthew L.; Schoellhamer, David H.; Burau, Jon R.; Monismith, Stephen G.; Winterwerp, J.C.; Kranenburg, C.

2002-01-01

The relationship between sediment bed flux and bed shear stress during a pair of field experiments in a partially stratified estuary is examined in this paper. Time series of flow velocity, vertical density profiles, and suspended sediment concentration were measured continuously throughout the water column and intensely within 1 meter of the bed. These time series were analyzed to determine bed shear stress, vertical turbulent sediment flux, and mass of sediment suspended in the water column. Resuspension, as inferred from near-bed measurements of vertical turbulent sediment flux, was flood dominant, in accordance with the flood-dominant bed shear stress. Bathymetry-induced residual flow, gravitational circulation, and ebb tide salinity stratification contributed to the flood dominance. In addition to this flow-induced asymmetry, the erodibility of the sediment appears to increase during the first 2 hours of flood tide. Tidal asymmetry in bed shear stress and erodibility help explain an estuarine turbidity maximum that is present during flood tide but absent during ebb tide. Because horizontal advection was insignificant during most of the observation periods, the change in bed mass can be estimated from changes in the total suspended sediment mass. The square wave shape of the bed mass time series indicates that suspended sediment rapidly deposited in an unconsolidated or concentrated benthic suspension layer at slack tides and instantly resuspended when the shear stress became sufficiently large during a subsequent tide. The variability of bed mass associated with the spring/neap cycle (about 60 mg/cm2) is similar to that associated with the semidiurnal tidal cycle.

Exploration of Antarctic Subglacial environments: a challenge for analytical chemistry

NASA Astrophysics Data System (ADS)

Traversi, R.; Becagli, S.; Castellano, E.; Ghedini, C.; Marino, F.; Rugi, F.; Severi, M.; Udisti, R.

2009-12-01

The large number of subglacial lakes detected in the Dome C area in East Antarctica suggests that this region may be a valuable source of paleo-records essential for understanding the evolution of the Antarctic ice cap and climate changes in the last several millions years. In the framework of the Project on “Exploration and characterization of Concordia Lake, Antarctica”, supported by Italian Program for Antarctic Research (PNRA), a glaciological investigation of the Dome C “Lake District” are planned. Indeed, the glacio-chemical characterisation of the ice column over subglacial lakes will allow to evaluate the fluxes of major and trace chemical species along the ice column and in the accreted ice and, consequently, the availability of nutrients and oligo-elements for possible biological activity in the lake water and sediments. Melting and freezing at the base of the ice sheet should be able to deliver carbon and salts to the lake, as observed for the Vostok subglacial lake, which are thought to be able to support a low concentration of micro-organisms for extended periods of time. Thus, this investigation represents the first step for exploring the subglacial environments including sampling and analysis of accreted ice, lake water and sediments. In order to perform reliable analytical measurements, especially of trace chemical species, clean sub-sampling and analytical techniques are required. For this purpose, the techniques already used by the CHIMPAC laboratory (Florence University) in the framework of international Antarctic drilling Projects (EPICA - European Project for Ice Coring in Antarctica, TALDICE - TALos Dome ICE core, ANDRILL MIS - ANTarctic DRILLing McMurdo Ice Shelf) were optimised and new techniques were developed to ensure a safe sample handling. CHIMPAC laboratory has been involved since several years in the study of Antarctic continent, primarily focused on understanding the bio-geo-chemical cycles of chemical markers and the interpretation of their records in sedimentary archives (ice cores, sediment cores). This activity takes advantage of facilities for storage, decontamination and pre-analysis treatment of ice and sediment strips (cold room equipped with laminar flow hoods and decontamination devices at different automation level, class 10000 clean room, systems for the complete acid digestion of sediment samples, production of ultra-pure acids and sediments’ granulometric selection) and for analytical determination of a wide range of chemical tracers. In particular, the operative instrumental set includes several Ion Chromatographs for inorganic and selected organic ions measurement (by classical Ion Chromatography and Fast Ion Chromatography), Atomic Absorption and Emission Spectrometers (F-AAS, GF-AAS, ICP-AES) and Inductively Coupled Plasma - Sector Field Mass Spectrometry (ICP-SFMS) for the analysis of the soluble or “available” inorganic fraction together with Ion Beam Analysis techniques for elemental composition (PIXE-PIGE, in collaboration with INFN and Physics Institute of Florence University) and geochemical analysis (SEM-EDS).

The determination of density and molecular weight distributions of lipoproteins by sedimentation equilibrium.

PubMed

Jeffrey, P D; Nichol, L W; Smith, G D

1975-01-25

A method is presented by which an experimental record of total concentration as a function of radial distance, obtained in a sedimentation equilibrium experiment conducted with a noninteracting mixture in the absence of a density gradient, may be analyzed to obtain the unimodal distributions of molecular weight and of partial molar volume when these vary concomitantly and continuously. Particular attention is given to the caracterization of classes of lipoproteins exhibiting Gaussian distributions of these quantities, although the analysis is applicable to other types of unimodal distribution. Equations are also formulated permitting the definition of the corresponding distributions of partial specific volume and of density. The analysis procedure is based on a method (employing Laplace transforms) developed previously, but differs from it in that it avoids the necessity of differentiating experimental results, which introduces error. The method offers certain advantages over other procedures used to characterize and compare lipoprotein samples (exhibiting unimodal distributions) with regard to the duration of the experiment, economy of the sample, and, particularly, the ability to define in principle all of the relevant distributions from one sedimentation equilibrium experiment and an external measurement of the weight average partial specific volume. These points and the steps in the analysis procedure are illustrated with experimental results obtained in the sedimentation equilibrium of a sample of human serum low density lipoprotein. The experimental parameters (such as solution density, column height, and angular velocity) used in the conduction of these experiments were selected on the basis of computer-simulated examples, which are also presented. These provide a guide for other workers interested in characterizing lipoproteins of this class.

Suspended Alexandrium spp. hypnozygote cysts in the Gulf of Maine

NASA Astrophysics Data System (ADS)

Kirn, Sarah L.; Townsend, David W.; Pettigrew, Neal R.

2005-09-01

The life cycle of dinoflagellates of the genus Alexandrium includes sexual reproduction followed by the formation of a dormant hypnozygote cyst, which serves as a resting stage. Negatively buoyant cysts purportedly fall to the benthos where they undergo a mandatory period of quiescence. Previous reports of cysts in the surficial sediments of the Gulf of Maine, where Alexandrium blooms are well documented, show a broad distribution of cysts, with highest concentrations generally in sediments below 100 m depth. We report here an exploration of cysts suspended in the water column, where they would be better positioned to inoculate springtime Alexandrium populations. During cruises in February, April, and June of 2000, water samples were collected at depths just off the bottom (within 5 m), at the top of the bottom nepheloid layer, and near the surface (1 m) and examined for cyst concentrations. Suspended cysts were found throughout the Gulf of Maine and westernmost Bay of Fundy. Planktonic cyst densities were generally greater in near-bottom and top of the bottom nepheloid layer samples than in near-surface water samples; densities were of the order of 10 2 cysts m -3 in surface waters, and 10 2-10 3 cysts m -3 at near-bottom depths. Temporally, they were most abundant in February and least abundant in April. Reports by earlier workers of cysts in the underlying sediments were on the order of 10 3 cysts cm -3. We present calculations that demonstrate the likelihood of cyst resuspension from bottom sediments forced by swell and tidal currents, and propose that such resuspended cysts are important in inoculating the seasonal bloom. We estimate that suspended cysts may contribute significantly to the annual vegetative cell population in the Gulf of Maine.

Benthic foraminiferal micro-ecology and the geochemical environments they sample

NASA Astrophysics Data System (ADS)

Jacobsen, Brittani; Loubere, Paul; Yavorska, Iryna; Klitgaard-Kristensen, Dorthe; Jernas, Patrycja

2010-05-01

Benthic foraminifera inhabit, and are adapted to, microenvironments ranging from within the water column to centimeters into the sediments. These influence the geochemistry of the foraminiferal shell, and the paleoceanographic tracers we extract from that geochemistry. For a number of proxies it is important to know what geochemical environments the foraminifera are calcifying in, and whether species are consistent in the habitats they select for calcification. We examine these issues by sampling pore water chemistry and living species distributions on the microscale that the foraminifera themselves experience. We maintained cores from the Norwegian margin under in-situ conditions while measuring oxygen microprofiles and small scale sampling for foraminifera using rose Bengal and cell tracker green staining. In addition we sampled cores for porosity and pore water carbon isotopes using two extraction techniques so as to measure isotope profiles and degree of sediment irrigation via infaunal structures. The primary forcing variable we examined was changing labile organic carbon flux to the seabed. Under moderate to higher fluxes we found evidence for extensive bio-irrigation which influenced the composition of pore waters and microhabitats available to foraminifera. Macro-meiofaunal burrows and tubes produced a mosaic of pore water geochemical conditions rather than smooth gradients from the sediment-water interface. We found species adapted to particular conditions living at various subsurface depths, where their preferred conditions existed. We also found evidence that foraminiferal species responded to larger organism activities (feeding activities) and products (fecal deposits). It appears that taxa select for particular conditions rather than simply living at specific subsurface depths, recording whatever geochemistry happens to exist at that level.

Determining the presence of dipropylene glycol n-butyl ether (DPnB) in sediments and sands contaminated by the Deepwater Horizon (DWH) oil spill

NASA Astrophysics Data System (ADS)

Boehman, B.; Lyons, S. L.; Geng, Z.; White, H. K.

2016-02-01

In an attempt to mitigate the impact of the oil released from the Deepwater Horizon (DWH) oil spill, chemical dispersants (Corexit 9527 and Corexit 9500A, from Nalco Co.) were applied to the surface and subsurface waters of the Gulf of Mexico. Over the past five years studies have investigated the fate of oil from the spill and the applied dispersants, although significantly less is known about the latter. To determine the presence of dispersant in environmental samples, dioctyl sodium sulfosuccinate (DOSS), a component of both Corexit mixtures, has previously been examined in samples taken from the water column, coastal beaches and deep-sea sediments. This study expands upon this work by developing a method to extract dipropylene glycol n-butyl ether (DPnB), an additional compound present in Corexit, from sand and sediment samples contaminated with oil from the DWH spill. Controls spiked with a known quantity of DPnB were extracted with a range of organic solvents of different polarities to optimize the extraction of DPnB. Total organic extracts were then subjected to silica gel chromatography to isolate DPnB from any oil that was co-extracted. All samples were concentrated prior to analysis via gas chromatography mass spectrometry (GC/MS) using selected ion monitoring (SIM). The analysis and quantification of DPnB, which has different chemical properties than DOSS, will provide additional insight into the mechanisms that control the fate of oil and dispersant mixtures in the marine environment.

Dissolved sulfide distributions in the water column and sediment pore waters of the Santa Barbara Basin

USGS Publications Warehouse

Kuwabara, J.S.; VanGeen, A.; McCorkle, D.C.; Bernhard, J.M.

1999-01-01

Dissolved sulfide concentrations in the water column and in sediment pore waters were measured by square-wave voltammetry (nanomolar detection limit) during three cruises to the Santa Barbara Basin in February 1995, November-December 1995, and April 1997. In the water column, sulfide concentrations measured outside the basin averaged 3 ?? 1 nM (n = 28) in the 0 to 600 m depth range. Inside the basin, dissolved sulfides increased to reach values of up to 15 nM at depths >400 m. A suite of box cores and multicores collected at four sites along the northeastern flank of the basin showed considerable range in surficial (400 ??M at 10 cm. Decreases in water-column nitrate below the sill depth indicate nitrate consumption (-55 to -137 ??mole m-2 h-1) similar to nearby Santa Monica Basin. Peaks in pore-water iron concentrations were generally observed between 2 and 5 cm depth with shallowest peaks at the 590 m site. These observations, including observations of the benthic microfauna, suggest that the extent to which the sulfide flux, sustained by elevated pore-water concentrations, reaches the water column may be modulated by the abundance of sulfide-oxidizing bacteria in addition to iron redox and precipitation reactions.

Persistence and microbial source tracking of Escherichia coli at a swimming beach at Lake of the Ozarks State Park, Missouri

USGS Publications Warehouse

Wilson, Jordan L.; Schumacher, John G.; Burken, Joel G.

2016-01-01

The Missouri Department of Natural Resources (MDNR) has closed or posted advisories at public beaches at Lake of the Ozarks State Park in Missouri because of Escherichia coli (E. coli) concentration exceedances in recent years. Spatial and temporal patterns of E. coliconcentrations, microbial source tracking, novel sampling techniques, and beach-use patterns were studied during the 2012 recreational season to identify possible sources, origins, and occurrence of E. coli contamination at Grand Glaize Beach (GGB). Results indicate an important source of E. coli contamination at GGB was E. coli released into the water column by bathers resuspending avian-contaminated sediments, especially during high-use days early in the recreational season. Escherichia coli concentrations in water, sediment, and resuspended sediment samples all decreased throughout the recreational season likely because of decreasing lake levels resulting in sampling locations receding away from the initial spring shoreline as well as natural decay and physical transport out of the cove. Weekly MDNR beach monitoring, based solely on E. coli concentrations, at GGB during this study inaccurately predicted E. coli exceedances, especially on weekends and holidays. Interestingly, E. coli of human origin were measured at concentrations indicative of raw sewage in runoff from an excavation of a nearby abandoned septic tank that had not been used for nearly two years.

Seasonal and interannual study of volatile reduced sulfur compounds (VRSC) in coastal environment: the Bay of Quiberon (Brittany, France)

NASA Astrophysics Data System (ADS)

Cozic-Houly, A.; Viollier, E.; Sarazin, G.; Knoery, J.

2009-10-01

Seasonal and annual variability of hydrogen sulfide (H2S), carbonyl sulfide (OCS), methane thiol (MeSH), dimethyl sulfide (DMS) and dimethyl disulfide (DMDS) concentrations and supporting parameters (e.g., phytoplanktonic cells abundance) were investigated in a coastal marine environment, the Bay of Quiberon (Brittany, France) from July 2004 to August 2006. The sampling was conducted in the water column, within two meters of the sediment water interface (SWI). Minimum and maximum values were <0.1-1.6 nmol L-1 for H2S, <0.1-4.2 nmol L-1 for OCS, <0.1-7.8 nmol L-1 for MeSH, <0.1-17.5 nmol L-1 for DMS and <0.1-1.7 nmol L-1 for DMDS. Vertical carbonyl sulfide distribution showed seasonal variations with lower concentration near the SWI in winter and bottom enrichments near sediments in summer. Vertical sulfide distribution not seems to be influenced by the shallow sediments. The likely influence of Dinophyceae abundance on the MeSH, DMS and DMDS concentrations was evident for the 3-summer monitored period.

Water column 230Th systematics in the eastern equatorial Pacific Ocean and implications for sediment focusing

NASA Astrophysics Data System (ADS)

Singh, Ajay K.; Marcantonio, Franco; Lyle, Mitchell

2013-01-01

In an effort to investigate the cause of higher-than-expected sediment inventories of 230Th in the Panama Basin, thorium isotopes were measured in eight deep-water casts within the Guatemala, Panama, and Peru Basins along a meridional transect at ˜86°W between 6.5°N and 8.5°S. Dissolved 230Th concentrations increase linearly from the surface to 1000 m at each transect station. Below 1000 m, the deep waters of the Panama Basin show the highest deficit (˜50%) of 230Th assuming a reversible exchange of 230Th between dissolved and sinking particulate matter, and in comparison with the globally averaged water-column 230Th. Peru Basin waters have a larger range of dissolved 230Th concentrations (7.9-16.5 fg/kg) than that within Panama Basin waters (5.7-7.1 fg/kg). There is a progressive decrease in average dissolved deep-water (>1000 m) 230Th concentrations from the southernmost sites in the Peru Basin toward the Panama Basin. We suggest that intense scavenging by upwelling-derived-productivity near the equator (±2°) and resuspension of ubiquitous Mn-rich particulates in Panama Basin sediments are the primary causes of the significant south-to-north lateral gradient in deep-water dissolved 230Th. Although 230Th from Peru Basin waters may be transported and then scavenged and ultimately buried in the Panama Basin, our calculations suggest that the quantity of advected 230Th is relatively small (between 15% and 30% of the total 230Th being produced within water column of the Panama Basin itself). Panama Basin sediment focusing factors greater than 1.3 cannot be explained by lateral export and excess scavenging of water column 230Th. Dissolved 232Th concentrations, in addition to being the lowest reported so far in the literature, fall within a very narrow range (6-26 pg/kg), and are generally invariable with depth. This invariability suggests the dissolution of dust in surface waters as a likely sole source of dissolved 232Th for the entire water column.

Characterization of stratification for an opaque highly stable magnetorheological fluid using vertical axis inductance monitoring system

NASA Astrophysics Data System (ADS)

Xie, Lei; Choi, Young-Tai; Liao, Chang-Rong; Wereley, Norman M.

2015-05-01

A key requirement for the commercialization of various magnetorheological fluid (MRF)-based applications is sedimentation stability. In this study, a high viscosity linear polysiloxane (HVLP), which has been used for shock absorbers in heavy equipment, is proposed as a new carrier fluid in highly stable MRFs. The HVLP is known to be a thixotropic (i.e., shear thinning) fluid that shows very high viscosity at very low shear rate and low viscosity at higher shear rate. In this study, using the shear rheometer, the significant thixotropic behavior of the HVLP was experimentally confirmed. In addition, a HVLP carrier fluid-based MRF (HVLP MRF) with 26 vol. % was synthesized and its sedimentation characteristics were experimentally investigated. But, because of the opacity of the HVLP MRF, no mudline can be visually observed. Hence, a vertical axis inductance monitoring system (VAIMS) applied to a circular column of fluid was used to evaluate sedimentation behavior by correlating measured inductance with the volume fraction of dispersed particles (i.e., Fe). Using the VAIMS, Fe concentration (i.e., volume fraction) was monitored for 28 days with a measurement taken every four days, as well as one measurement after 96 days to characterize long-term sedimentation stability. Finally, the concentration of the HVLP MRF as a function of the depth in the column and time, as well as the concentration change versus the depth in the column, are presented and compared with those of a commercially available MRF (i.e., Lord MRF-126CD).

Approaches for derivation of environmental quality criteria for substances applied in risk assessment of discharges from offshore drilling operations.

PubMed

Altin, Dag; Frost, Tone Karin; Nilssen, Ingunn

2008-04-01

In order to achieve the offshore petroleum industries "zero harm" goal to the environment, the environmental impact factor for drilling discharges was developed as a tool to identify and quantify the environmental risks associated with disposal of drilling discharges to the marine environment. As an initial step in this work the main categories of substances associated with drilling discharges and assumed to contribute to toxic or nontoxic stress were identified and evaluated for inclusion in the risk assessment. The selection were based on the known toxicological properties of the substances, or the total amount discharged together with their potential for accumulation in the water column or sediments to levels that could be expected to cause toxic or nontoxic stress to the biota. Based on these criteria 3 categories of chemicals were identified for risk assessment the water column and sediments: Natural organic substances, metals, and drilling fluid chemicals. Several approaches for deriving the environmentally safe threshold concentrations as predicted no effect concentrations were evaluated in the process. For the water column consensus were reached for using the species sensitivity distribution approach for metals and the assessment factor approach for natural organic substances and added drilling chemicals. For the sediments the equilibrium partitioning approach was selected for all three categories of chemicals. The theoretically derived sediment quality criteria were compared to field-derived threshold effect values based on statistical approaches applied on sediment monitoring data from the Norwegian Continental Shelf. The basis for derivation of predicted no effect concentration values for drilling discharges should be consistent with the principles of environmental risk assessment as described in the Technical Guidance Document on Risk Assessment issued by the European Union.

Impacts of sea cucumber farming on biogeochemical characteristics in the Yellow River estuary, Northern China

NASA Astrophysics Data System (ADS)

Fu, Jing; Yokoyama, Hisashi; Cui, Baoshan; Zhou, Jin; Yan, Jiaguo; Ma, Xu; Shibata, Shozo

2017-02-01

To investigate the potential environmental effects of pond farming for Apostichopus japonicas in Yellow River estuary, we examined discrepancies of distance-based typical pollution indicators (TOC, TN, NO3-, NH4+, NO2- and PO43-) and biochemical tracers (δ13C and δ15N) in water column and sediment, as well as dietary characteristics of dominant macrobenthos between farming and non-farming areas. The results revealed that studied variables in water column showed no uniform spatial differences. Meanwhile, those in sediment displayed similar decrease tendencies from farming pond to the adjacent tidal flat, which was considered to represent the environmental effects of farming. Biochemical tracers (δ13C and δ15N) in both water column and sediment confirmed the origin of organic matters from the aquaculture waste. The detectable dispersion distance of aquaculture waste was restricted to an area within 50 m distance as determined by most variables in sediment (TOC, TN, NO3- and NH4+), particularly by C:N ratio and δ13C with which origins of the wastes were traced. Bayesian mixing models indicated that in the farming area BMA had a larger contribution, while POM(marine) showed a smaller contribution to the diets of Helice tridens and Macrophthalmus abbreviates compared to those in the non-farming area. The overall results showed that pond farming for Apostichopus japonicus in the Yellow River estuary altered the local environment to a certain extent. For methodological consideration, sediment biogeochemical characteristics as a historical recorder much more effectively reflected aquaculture waste accumulation, and stable isotope approaches are efficient in tracing the origin and extent of various allogenous sources.

Implication of two in-stream processes in the fate of nutrients discharged by sewage system into a temporary river.

PubMed

David, Arthur; Perrin, Jean-Louis; Rosain, David; Rodier, Claire; Picot, Bernadette; Tournoud, Marie-George

2011-10-01

The aim of this study was to better understand the fate of nutrients discharged by sewage treatment plants into an intermittent Mediterranean river, during a low-flow period. Many pollutants stored in the riverbed during the low-flow period can be transferred to the downstream environments during flood events. The study focused on two processes that affect the fate and the transport of nutrients, a physical process (retention in the riverbed sediments) and a biological process (denitrification). A spatial campaign was carried out during a low-flow period to characterize the nutrient contents of both water and sediments in the Vène River. The results showed high nutrient concentrations in the water column downstream of the treated wastewater disposal (up to 13,315 μg N/L for ammonium and 2,901 μg P/L for total phosphorus). Nutrient concentrations decreased rapidly downstream of the disposal whereas nutrient contents in the sediments increased (up to 1,898 and 784 μg/g for total phosphorus and Kjeldahl nitrogen, respectively). According to an in situ experiment using sediment boxes placed in the riverbed for 85 days, we estimated that the proportion of nutrients trapped in the sediments represents 25% (respectively 10%) of phosphorus (respectively nitrogen) loads lost from the water column. In parallel, laboratory tests indicated that denitrification occurred in the Vène River, and we estimated that denitrification likely coupled to nitrification processes during the 85 days of the experiment was significantly involved in the removal of nitrogen loads (up to 38%) from the water column and was greater than accumulation processes.

Use of Polyphosphate to Decrease Uranium Leaching in Hanford 300 Area Smear Zone Sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Szecsody, James E.; Zhong, Lirong; Oostrom, Martinus

2012-09-30

The primary objective of this study is to summarize the laboratory investigations performed to evaluate short- and long-term effects of phosphate treatment on uranium leaching from 300 area smear zone sediments. Column studies were used to compare uranium leaching in phosphate-treated to untreated sediments over a year with multiple stop flow events to evaluate longevity of the uranium leaching rate and mass. A secondary objective was to compare polyphosphate injection, polyphosphate/xanthan injection, and polyphosphate infiltration technologies that deliver phosphate to sediment.

Interactions between waves, sediment, and turbulence on a shallow estuarine mudflat

USGS Publications Warehouse

MacVean, Lissa J.; Lacy, Jessica R.

2014-01-01

stress, which diffused sediment upward and limited stratification. Our findings highlight a pathway for waves to supply energy to both the production and destruction of turbulence, and demonstrate that in such shallow depths, TKE and SSC can be elevated over more of the water column than predicted by traditional models.

Wave Glider Monitoring of Sediment Transport and Dredge Plumes in a Shallow Marine Sandbank Environment.

PubMed

Van Lancker, Vera; Baeye, Matthias

2015-01-01

As human pressure on the marine environment increases, safeguarding healthy and productive seas increasingly necessitates integrated, time- and cost-effective environmental monitoring. Employment of a Wave Glider proved very useful for the study of sediment transport in a shallow sandbank area in the Belgian part of the North Sea. During 22 days, data on surface and water-column currents and turbidity were recorded along 39 loops around an aggregate-extraction site. Correlation with wave and tidal-amplitude data allowed the quantification of current- and wave-induced advection and resuspension, important background information to assess dredging impacts. Important anomalies in suspended particulate matter concentrations in the water column suggested dredging-induced overflow of sediments in the near field (i.e., dynamic plume), and settling of finer-grained material in the far field (i.e., passive plume). Capturing the latter is a successful outcome to this experiment, since the location of dispersion and settling of a passive plume is highly dependent on the ruling hydro-meteorological conditions and thus difficult to predict. Deposition of the observed sediment plumes may cause habitat changes in the long-term.

Pleistocene Thermocline Reconstruction and Oxygen Minimum Zone Evolution in the Maldives

NASA Astrophysics Data System (ADS)

Yu, S. M.; Wright, J.

2017-12-01

Drift deposits of the southern flank the Kardiva Channel in the eastern Inner Sea of the Maldives provide a complete record of Pleistocene water column changes in conjunction with monsoon cyclicity and fluctuations in the current system. We sampled IODP Site 359-U1467 to reconstruct water column using foraminiferal stable isotope records. This unlithified lithostratigraphic unit is rich in well-preserved microfossils and has an average sedimentation rate of 3.4 cm/yr. Marine Isotope Stages 1-6 were identified and show higher sedimentation rates during the interglacial sections approaching 6 cm/kyr. We present the δ13C and δ18O record of planktonic and benthic foraminiferal species taken at intervals of 3 cm. Globigerinoides ruber was used to constrain surface conditions. The thermocline dwelling species, Globorotalia menardii, was chosen to monitor fluctuations in the thermocline compared to the mixed layer. Lastly, the δ13C of the benthic species, Cibicidoides subhaidingerii and Planulina renzi, reveal changes to the bottom water ventilation and expansion of oxygen minimum zones over time. All three taxa recorded similar changes in δ18O over the glacial/interglacial cycles which is remarkable given the large sea level change ( 120 m) and the relatively shallow water depth ( 450 m). There is a small increase in the δ13C gradient during the glacial intervals which might reflect less ventilated bottom waters in the Inner Sea. This multispecies approach allows us to better constrain the thermocline hydrography and suggests that changes in the OMZ thickness are driven by the intensification of the monsoon cycles while painting a more cohesive picture to the changes in the water column structure.