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Sample records for comparative plant uptake

  1. Comparative studies on heavy metal uptake by plants from anaerobically and aerobically digested sludge-amended soil

    SciTech Connect

    Joseph, K.T.

    1983-01-01

    A study was undertaken to compare and contrast the effects of cropland application of varying quantities of anaerobically and aerobically digested sludge from a municipal wastewater treatment plant, on the uptake of certain heavy metals such as Zn, Cd, Cu, Ni, and Pb by six different types of plants (bean, tomato, carrot, cucumber, cantaloupe and sweet corn) grown on the sludge-applied soil and the accumulation of these metals in the sludge-amended soil. The main aspects of the study were the evaluation of 1) the extent of bioconcentration of heavy metals by the different kinds of plants, and 2) the availability of the metals from soil to plants, following sludge application. Field investigations involving plot-scale gardening were conducted using the two types of sludge, at application rates of 0, 2.2, 4.4, 8.8, 17.6 and 70.4 tons/acre. At application rates of 17.6 and 70.4 tons/acre, delays in germination of seeds were observed in some instances, with no apparent adverse effects on the plant's later stages of life and the yield produced. The uptake of heavy metals from sludge-amended soil by plants did not increase in direct proportion to the increase in rate of sludge application and plant species differ considerably in their uptake of heavy metals from soil which received the same amount of sludge. In general, plants grown on anaerobically digested sludge-applied soil showed higher uptake of heavy metals than those grown on aerobically digested sludge. Among the plants investigated, sweet corn was identified to be the low accumulator of heavy metals in the edible part of the plant.

  2. Uptake of perchlorate in terrestrial plants.

    PubMed

    Yu, Lu; Cañas, Jaclyn E; Cobb, George P; Jackson, William A; Anderson, Todd A

    2004-05-01

    Cucumber (Cucumis sativus L.), lettuce (Lactuca sativa L.), and soybean (Glycine max) were used to determine uptake of the perchlorate anion (100 ppb) from sand. Plants were watered with different ratios of Hydrosol (a diluted solution of Peters All-Purpose Plant Food) to Milli-Q water (18 MOmega) to determine if the presence of other nutrients (such as nitrate) influenced perchlorate uptake. Perchlorate concentrations in sand and plant tissues were determined weekly. Perchlorate uptake was observed in all three plant species. In most experiments, perchlorate was completely depleted from sand in which plants were growing. Perchlorate concentrations in lettuce were also significantly higher than those in cucumber and soybean (P < 0.0001). Perchlorate concentrations in sand decreased at a higher rate at lower ratios of Hydrosol to Milli-Q, indicating that plant (cucumber) uptake of perchlorate is influenced by the presence of external nutrients. The results of an 8-week uptake study in cucumber and a 6-week uptake study in lettuce suggest that a threshold perchlorate concentration is reached: for cucumber, 150 ppm and for lettuce, 750 ppm. Although the presence of external nutrients decreases the rate of perchlorate uptake by plants, significant concentrations of perchlorate occur in aboveground plant tissues even after relatively short periods of growth. The potential for trophic transfer of perchlorate from soil to higher organisms through plants exists.

  3. Nitrogen uptake and utilization by intact plants

    NASA Technical Reports Server (NTRS)

    Raper, C. D., Jr.; Tolley-Henry, L. C.

    1986-01-01

    The results of experiments support the proposed conceptual model that relates nitrogen uptake activity by plants as a balanced interdependence between the carbon-supplying function of the shoot and the nitrogen-supplying function of the roots. The data are being used to modify a dynamic simulation of plant growth, which presently describes carbon flows through the plant, to describe nitrogen uptake and assimilation within the plant system. Although several models have been proposed to predict nitrogen uptake and partitioning, they emphasize root characteristics affecting nutrient uptake and relay on empirical methods to describe the relationship between nitrogen and carbon flows within the plant. Researchers, on the other hand, propose to continue to attempt a mechanistic solution in which the effects of environment on nitrogen (as well as carbon) assimilation are incorporated through their direct effects on photosynthesis, respiration, and aging processes.

  4. Comparative plant uptake and microbial degradation of trichloroethylene in the rhizospheres of five plant species-- implications for bioremediation of contaminated surface soils

    SciTech Connect

    Anderson, T.A.; Walton, B.T.

    1992-01-01

    The objective of this study was to collect data that would provide a foundation for the concept of using vegetation to enhance in situ bioremediation of contaminated surface soils. Soil and vegetation (Lespedeza cuneata, Paspalum notatum, Pinus taeda, and Solidago sp.) samples from the Miscellaneous Chemicals Basin (MCB) at the Savannah River Site were used in tests to identify critical plant and microbiological variables affecting the fate of trichloroethylene (TCE) in the root zone. Microbiological assays including phospholipid acid analyses, and {sup 14}C-acetate incorporation were conducted to elucidate differences in rhizosphere and nonvegetated soil microbial communities from the MCB. The microbial activity, biomass, and degradation of TCE in rhizosphere soils were significantly greater than corresponding nonvegetated soils. Vegetation had a positive effect on microbial degradation of {sup 14}C-TCE in whole-plant experiments. Soils from the MCB containing Lespedeza cuneata, Pinus taeda, and Glycine max mineralized greater than 25% of the {sup 14}C- TCE added compared with less than 20% in nonvegetated soils. Collectively, these results provide evidence for the positive role of vegetation in enhancing biodegradation.

  5. Endocytotic uptake of nutrients in carnivorous plants.

    PubMed

    Adlassnig, Wolfram; Koller-Peroutka, Marianne; Bauer, Sonja; Koshkin, Edith; Lendl, Thomas; Lichtscheidl, Irene K

    2012-07-01

    Carnivorous plants trap, digest and absorb animals in order to supplement their mineral nutrition. Nutrients absorbed by the plant include different nitrogen species, phosphate, potassium, trace elements and small organic compounds. Uptake is usually thought to be performed via specific channels, but this study provides evidence that endocytosis is involved as well. Traps of the carnivorous plants Nepenthes coccinea, Nepenthes ventrata, Cephalotus follicularis, Drosophyllum lusitanicum, Drosera capensis, Dionaea muscipula, Aldrovanda vesiculosa, Genlisea violacea × lobata, Sarracenia psittacina and Sarracenia purpurea were stained with methylene blue in order to identify possible sites of uptake. The permeable parts of the traps were incubated with fluorescein isothiocyanate labelled bovine serum albumin (FITC-BSA) and other fluorescent endocytosis markers, combined with the soluble protein BSA or respiratory inhibitors. Uptake was studied by confocal microscopy. In Nepenthes, small fluorescent vesicles became visible 1 h after incubation with FITC-BSA. These vesicles fused to larger compartments within 30 h. A similar behaviour was found in the related genera Drosera, Dionaea, Aldrovanda and Drosophyllum but also in Cephalotus with glands of different evolutionary origin. In Genlisea and Sarracenia, no evidence for endocytosis was found. We propose that in many carnivorous plants, nutrient uptake by carriers is supplemented by endocytosis, which enables absorption and intracellular digestion of whole proteins. The advantage for the plant of reducing secretion of enzymes for extracellular digestion is evident.

  6. Endocytotic uptake of nutrients in carnivorous plants.

    PubMed

    Adlassnig, Wolfram; Koller-Peroutka, Marianne; Bauer, Sonja; Koshkin, Edith; Lendl, Thomas; Lichtscheidl, Irene K

    2012-07-01

    Carnivorous plants trap, digest and absorb animals in order to supplement their mineral nutrition. Nutrients absorbed by the plant include different nitrogen species, phosphate, potassium, trace elements and small organic compounds. Uptake is usually thought to be performed via specific channels, but this study provides evidence that endocytosis is involved as well. Traps of the carnivorous plants Nepenthes coccinea, Nepenthes ventrata, Cephalotus follicularis, Drosophyllum lusitanicum, Drosera capensis, Dionaea muscipula, Aldrovanda vesiculosa, Genlisea violacea × lobata, Sarracenia psittacina and Sarracenia purpurea were stained with methylene blue in order to identify possible sites of uptake. The permeable parts of the traps were incubated with fluorescein isothiocyanate labelled bovine serum albumin (FITC-BSA) and other fluorescent endocytosis markers, combined with the soluble protein BSA or respiratory inhibitors. Uptake was studied by confocal microscopy. In Nepenthes, small fluorescent vesicles became visible 1 h after incubation with FITC-BSA. These vesicles fused to larger compartments within 30 h. A similar behaviour was found in the related genera Drosera, Dionaea, Aldrovanda and Drosophyllum but also in Cephalotus with glands of different evolutionary origin. In Genlisea and Sarracenia, no evidence for endocytosis was found. We propose that in many carnivorous plants, nutrient uptake by carriers is supplemented by endocytosis, which enables absorption and intracellular digestion of whole proteins. The advantage for the plant of reducing secretion of enzymes for extracellular digestion is evident. PMID:22417315

  7. Uranium uptake by hydroponically cultivated crop plants.

    PubMed

    Soudek, Petr; Petrová, Sárka; Benešová, Dagmar; Dvořáková, Marcela; Vaněk, Tomáš

    2011-06-01

    Hydroponicaly cultivated plants were grown on medium containing uranium. The appropriate concentrations of uranium for the experiments were selected on the basis of a standard ecotoxicity test. The most sensitive plant species was determined to be Lactuca sativa with an EC(50) value about 0.1mM. Cucumis sativa represented the most resistant plant to uranium (EC(50)=0.71 mM). Therefore, we used the uranium in a concentration range from 0.1 to 1mM. Twenty different plant species were tested in hydroponic solution supplemented by 0.1mM or 0.5mM uranium concentration. The uranium accumulation of these plants varied from 0.16 mg/g DW to 0.011 mg/g DW. The highest uranium uptake was determined for Zea mays and the lowest for Arabidopsis thaliana. The amount of accumulated uranium was strongly influenced by uranium concentration in the cultivation medium. Autoradiography showed that uranium is mainly localized in the root system of the plants tested. Additional experiments demonstrated the possibility of influencing the uranium uptake from the cultivation medium by amendments. Tartaric acid was able to increase uranium uptake by Brassica oleracea and Sinapis alba up to 2.8 times or 1.9 times, respectively. Phosphate deficiency increased uranium uptake up to 4.5 times or 3.9 times, respectively, by Brassica oleracea and S. alba. In the case of deficiency of iron or presence of cadmium ions we did not find any increase in uranium accumulation.

  8. Plant-uptake of uranium: Hydroponic and soil system studies

    USGS Publications Warehouse

    Ramaswami, A.; Carr, P.; Burkhardt, M.

    2001-01-01

    Limited information is available on screening and selection of terrestrial plants for uptake and translocation of uranium from soil. This article evaluates the removal of uranium from water and soil by selected plants, comparing plant performance in hydroponic systems with that in two soil systems (a sandy-loam soil and an organic-rich soil). Plants selected for this study were Sunflower (Helianthus giganteus), Spring Vetch (Vicia sativa), Hairy Vetch (Vicia villosa), Juniper (Juniperus monosperma), Indian Mustard (Brassica juncea), and Bush Bean (Phaseolus nanus). Plant performance was evaluated both in terms of the percent uranium extracted from the three systems, as well as the biological absorption coefficient (BAC) that normalized uranium uptake to plant biomass. Study results indicate that uranium extraction efficiency decreased sharply across hydroponic, sandy and organic soil systems, indicating that soil organic matter sequestered uranium, rendering it largely unavailable for plant uptake. These results indicate that site-specific soils must be used to screen plants for uranium extraction capability; plant behavior in hydroponic systems does not correlate well with that in soil systems. One plant species, Juniper, exhibited consistent uranium extraction efficiencies and BACs in both sandy and organic soils, suggesting unique uranium extraction capabilities.

  9. Plant Water Uptake in Drying Soils1

    PubMed Central

    Lobet, Guillaume; Couvreur, Valentin; Meunier, Félicien; Javaux, Mathieu; Draye, Xavier

    2014-01-01

    Over the last decade, investigations on root water uptake have evolved toward a deeper integration of the soil and roots compartment properties, with the goal of improving our understanding of water acquisition from drying soils. This evolution parallels the increasing attention of agronomists to suboptimal crop production environments. Recent results have led to the description of root system architectures that might contribute to deep-water extraction or to water-saving strategies. In addition, the manipulation of root hydraulic properties would provide further opportunities to improve water uptake. However, modeling studies highlight the role of soil hydraulics in the control of water uptake in drying soil and call for integrative soil-plant system approaches. PMID:24515834

  10. Lead uptake, toxicity, and detoxification in plants.

    PubMed

    Pourrut, Bertrand; Shahid, Muhammad; Dumat, Camille; Winterton, Peter; Pinelli, Eric

    2011-01-01

    Lead has gained considerable attention as a persistent toxic pollutant of concern,partly because it has been prominent in the debate concerning the growing anthropogenic pressure on the environment. The purpose of this review is to describe how plants take lead up and to link such uptake to the ecotoxicity of lead in plants.Moreover, we address the mechanisms by which plants or plant systems detoxify lead.Lead has many interesting physico-chemical properties that make it a very useful heavy metal. Indeed, lead has been used by people since the dawn of civilization.Industrialization, urbanization, mining, and many other anthropogenic activities have resulted in the redistribution of lead from the earth's crust to the soil and to the environment.Lead forms various complexes with soil components, and only a small fraction of the lead present as these complexes in the soil solution are phyto available. Despite its lack of essential function in plants, lead is absorbed by them mainly through the roots from soil solution and thereby may enter the food chain. The absorption of lead by roots occurs via the apoplastic pathway or via Ca2+-permeable channels.The behavior of lead in soil, and uptake by plants, is controlled by its speciation and by the soil pH, soil particle size, cation-exchange capacity, root surface area,root exudation, and degree of mycorrhizal transpiration. After uptake, lead primarily accumulates in root cells, because of the blockage by Casparian strips within the endodermis. Lead is also trapped by the negative charges that exist on roots' cell walls.Excessive lead accumulation in plant tissue impairs various morphological, physiological, and biochemical functions in plants, either directly or indirectly, and induces a range of deleterious effects. It causes phytotoxicity by changing cell membrane permeability, by reacting with active groups of different enzymes involved in plant metabolism and by reacting with the phosphate groups of ADP or ATP

  11. Arsenic uptake and metabolism in plants.

    PubMed

    Zhao, F J; Ma, J F; Meharg, A A; McGrath, S P

    2009-03-01

    Arsenic (As) is an element that is nonessential for and toxic to plants. Arsenic contamination in the environment occurs in many regions, and, depending on environmental factors, its accumulation in food crops may pose a health risk to humans.Recent progress in understanding the mechanisms of As uptake and metabolism in plants is reviewed here. Arsenate is taken up by phosphate transporters. A number of the aquaporin nodulin26-like intrinsic proteins (NIPs) are able to transport arsenite,the predominant form of As in reducing environments. In rice (Oryza sativa), arsenite uptake shares the highly efficient silicon (Si) pathway of entry to root cells and efflux towards the xylem. In root cells arsenate is rapidly reduced to arsenite, which is effluxed to the external medium, complexed by thiol peptides or translocated to shoots. One type of arsenate reductase has been identified, but its in planta functions remain to be investigated. Some fern species in the Pteridaceae family are able to hyperaccumulate As in above-ground tissues. Hyperaccumulation appears to involve enhanced arsenate uptake, decreased arsenite-thiol complexation and arsenite efflux to the external medium, greatly enhanced xylem translocation of arsenite, and vacuolar sequestration of arsenite in fronds. Current knowledge gaps and future research directions are also identified. PMID:19207683

  12. Arsenic uptake and metabolism in plants.

    PubMed

    Zhao, F J; Ma, J F; Meharg, A A; McGrath, S P

    2009-03-01

    Arsenic (As) is an element that is nonessential for and toxic to plants. Arsenic contamination in the environment occurs in many regions, and, depending on environmental factors, its accumulation in food crops may pose a health risk to humans.Recent progress in understanding the mechanisms of As uptake and metabolism in plants is reviewed here. Arsenate is taken up by phosphate transporters. A number of the aquaporin nodulin26-like intrinsic proteins (NIPs) are able to transport arsenite,the predominant form of As in reducing environments. In rice (Oryza sativa), arsenite uptake shares the highly efficient silicon (Si) pathway of entry to root cells and efflux towards the xylem. In root cells arsenate is rapidly reduced to arsenite, which is effluxed to the external medium, complexed by thiol peptides or translocated to shoots. One type of arsenate reductase has been identified, but its in planta functions remain to be investigated. Some fern species in the Pteridaceae family are able to hyperaccumulate As in above-ground tissues. Hyperaccumulation appears to involve enhanced arsenate uptake, decreased arsenite-thiol complexation and arsenite efflux to the external medium, greatly enhanced xylem translocation of arsenite, and vacuolar sequestration of arsenite in fronds. Current knowledge gaps and future research directions are also identified.

  13. Plant uptake of sludge-borne PCBs

    SciTech Connect

    O'Connor, G.A.; Kiehl, D.; Eiceman, G.A.; Ryan, J.A.

    1990-01-01

    Plant uptake of sludge-borne polychlorinated biphenyls (PCBs) (similar to Aroclor 1248) was evaluated in a greenhouse study with two food-chain crops and a grass species. Polychlorinated biphenyl loading to two soils was varied in one experiment by adding different rates of a municipal sewage sludge heavily contaminated (52 mg/kg) with PCBs. In a second experiment, Aroclor 1248 was spiked into unamended soils or soils amended with another sludge containing <1mg/kg PCBs. Analysis of PCBs was by GC/MS with a reliable detection limit in plants of 20 microg/kg for individual chlorinated classes (tri, tetra-, and pentachlorobiphenyls) and total PCBs. Only carrots (Daucus carota) were contaminated with PCBs, and contamination was restricted to carrot peels. Current USEPA guidelines for land application of sludges based on sludge PCB content are shown to be extremely conservative.

  14. Expanding the menu for carnivorous plants: uptake of potassium, iron and manganese by carnivorous pitcher plants.

    PubMed

    Adlassnig, Wolfram; Steinhauser, Georg; Peroutka, Marianne; Musilek, Andreas; Sterba, Johannes H; Lichtscheidl, Irene K; Bichler, Max

    2009-12-01

    Carnivorous plants use animals as fertiliser substitutes which allow them to survive on nutrient deficient soils. Most research concentrated on the uptake of the prey's nitrogen and phosphorus; only little is known on the utilisation of other elements. We studied the uptake of three essential nutrients, potassium, iron and manganese, in three species of carnivorous pitcher plants (Cephalotus follicularis LaBilladiere, Sarracenia purpureaL., Heliamphora nutans Bentham). Using relatively short-lived and gamma-emitting radiotracers, we significantly improved the sensitivity compared to conventional protocols and gained the following results. We demonstrated the uptake of trace elements like iron and manganese. In addition, we found direct evidence for the uptake of potassium into the pitcher tissue. Potassium and manganese were absorbed to virtually 100% if offered in physiological concentrations or below in Cephalotus. Analysis of pitcher fluid collected in the natural habitat showed that uptake was performed here as efficiently as in the laboratory. The absorption of nutrients is an active process depending on living glandular cells in the pitcher epidermis and can be inhibited by azide. Unphysiologically high amounts of nutrients were taken up for a short time, but after a few hours the absorbing cells were damaged, and uptake stopped. Absorption rates of pitcher leaves from plants under controlled conditions varied highly, indicating that each trap is functionally independent. The comparison of minerals in typical prey with the plants' tissues showed that a complete coverage of the plants' needs by prey capture is improbable.

  15. Expanding the menu for carnivorous plants: uptake of potassium, iron and manganese by carnivorous pitcher plants.

    PubMed

    Adlassnig, Wolfram; Steinhauser, Georg; Peroutka, Marianne; Musilek, Andreas; Sterba, Johannes H; Lichtscheidl, Irene K; Bichler, Max

    2009-12-01

    Carnivorous plants use animals as fertiliser substitutes which allow them to survive on nutrient deficient soils. Most research concentrated on the uptake of the prey's nitrogen and phosphorus; only little is known on the utilisation of other elements. We studied the uptake of three essential nutrients, potassium, iron and manganese, in three species of carnivorous pitcher plants (Cephalotus follicularis LaBilladiere, Sarracenia purpureaL., Heliamphora nutans Bentham). Using relatively short-lived and gamma-emitting radiotracers, we significantly improved the sensitivity compared to conventional protocols and gained the following results. We demonstrated the uptake of trace elements like iron and manganese. In addition, we found direct evidence for the uptake of potassium into the pitcher tissue. Potassium and manganese were absorbed to virtually 100% if offered in physiological concentrations or below in Cephalotus. Analysis of pitcher fluid collected in the natural habitat showed that uptake was performed here as efficiently as in the laboratory. The absorption of nutrients is an active process depending on living glandular cells in the pitcher epidermis and can be inhibited by azide. Unphysiologically high amounts of nutrients were taken up for a short time, but after a few hours the absorbing cells were damaged, and uptake stopped. Absorption rates of pitcher leaves from plants under controlled conditions varied highly, indicating that each trap is functionally independent. The comparison of minerals in typical prey with the plants' tissues showed that a complete coverage of the plants' needs by prey capture is improbable. PMID:19428263

  16. Evolution of plant sucrose uptake transporters.

    PubMed

    Reinders, Anke; Sivitz, Alicia B; Ward, John M

    2012-01-01

    In angiosperms, sucrose uptake transporters (SUTs) have important functions especially in vascular tissue. Here we explore the evolutionary origins of SUTs by analysis of angiosperm SUTs and homologous transporters in a vascular early land plant, Selaginella moellendorffii, and a non-vascular plant, the bryophyte Physcomitrella patens, the charophyte algae Chlorokybus atmosphyticus, several red algae and fission yeast, Schizosaccharomyces pombe. Plant SUTs cluster into three types by phylogenetic analysis. Previous studies using angiosperms had shown that types I and II are localized to the plasma membrane while type III SUTs are associated with vacuolar membrane. SUT homologs were not found in the chlorophyte algae Chlamydomonas reinhardtii and Volvox carterii. However, the characean algae Chlorokybus atmosphyticus contains a SUT homolog (CaSUT1) and phylogenetic analysis indicated that it is basal to all other streptophyte SUTs analyzed. SUTs are present in both red algae and S. pombe but they are less related to plant SUTs than CaSUT1. Both Selaginella and Physcomitrella encode type II and III SUTs suggesting that both plasma membrane and vacuolar sucrose transporter activities were present in early land plants. It is likely that SUT transporters are important for scavenging sucrose from the environment and intracellular compartments in charophyte and non-vascular plants. Type I SUTs were only found in eudicots and we conclude that they evolved from type III SUTs, possibly through loss of a vacuolar targeting sequence. Eudicots utilize type I SUTs for phloem (vascular tissue) loading while monocots use type II SUTs for phloem loading. We show that HvSUT1 from barley, a type II SUT, reverted the growth defect of the Arabidopsis atsuc2 (type I) mutant. This indicates that type I and II SUTs evolved similar (and interchangeable) phloem loading transporter capabilities independently. PMID:22639641

  17. Modification of nitrate uptake pathway in plants affects the cadmium uptake by roots.

    PubMed

    Guan, Mei Yan; Fan, Shi Kai; Fang, Xian Zhi; Jin, Chong Wei

    2015-01-01

    NRT1.1 is a dual-affinity nitrate (NO3(-)) transporter involved in both high- and low-affinity NO3(-) uptake in Arabidopsis plants. In a recent study, we showed that, under cadmium (Cd) exposure, blocking the NRT1.1-mediated NO3(-) uptake reduces Cd entry into roots, thus lowing Cd levels in plants and improving plant growth. In addition, we also found that the Cd levels in edible parts of 11 Chinese cabbage (Brassica rapa L. ssp. pekinensis) cultivars correlated well with the NO3(-) uptake rates of their roots. These results suggested that the NO3(-) uptake of roots negatively regulate Cd uptake. Modification of NO3(-) uptake in crops by modulating NO3(-) uptake pathway might provide a biological engineering approach to reducing Cd accumulation in edible organs, thus improving food safety.

  18. Plant growth regulators enhance gold uptake in Brassica juncea.

    PubMed

    Kulkarni, Manoj G; Stirk, Wendy A; Southway, Colin; Papenfus, Heino B; Swart, Pierre A; Lux, Alexander; Vaculík, Marek; Martinka, Michal; Van Staden, Johannes

    2013-01-01

    The use of plant growth regulators is well established and they are used in many fields of plant science for enhancing growth. Brassica juncea plants were treated with 2.5, 5.0 and 7.5 microM auxin indole-3-butyric acid (IBA), which promotes rooting. The IBA-treated plants were also sprayed with 100 microM gibberellic acid (GA3) and kinetin (Kin) to increase leaf-foliage. Gold (I) chloride (AuCl) was added to the growth medium of plants to achieve required gold concentration. The solubilizing agent ammonium thiocyanate (1 g kg(-1)) (commonly used in mining industries to solubilize gold) was added to the nutrient solution after six weeks of growth and, two weeks later, plants were harvested. Plant growth regulators improved shoot and root dry biomass of B. juncea plants. Inductively Coupled Plasma Optical Emission Spectrometry analysis showed the highest Au uptake for plants treated with 5.0 microM IBA. The average recovery of Au with this treatment was significantly greater than the control treatment by 45.8 mg kg(-1) (155.7%). The other IBA concentrations (2.5 and 7.5 microM) also showed a significant increase in Au uptake compared to the control plants by 14.7 mg kg(-1) (50%) and 42.5 mg kg(-1) (144.5%) respectively. A similar trend of Au accumulation was recorded in the roots of B. juncea plants. This study conducted in solution culture suggests that plant growth regulators can play a significant role in improving phytoextraction of Au.

  19. Chemical hydrophobicity and uptake by plant roots.

    PubMed

    Dettenmaier, Erik M; Doucette, William J; Bugbee, Bruce

    2009-01-15

    The transpiration stream concentration factor (TSCF), the ratio between a compound's concentration in the xylem to that in the solution adjacent to the roots, is commonly used to describe the relative ability of an organic compound to be passively transported from root to shoot. Widely cited bell-shaped curves relating TSCFto the octanol/water partition coefficient (log Kow) imply that significant root uptake and transfer into shoot tissues occurs only for compounds falling within an intermediate hydrophobicity range. However, recent laboratory and field data for relatively water soluble compounds such as sulfolane, methyl tert-butyl ether (MTBE), and 1,4-dioxane suggest that these relationships are not universally applicable, especiallyfor nonionizable, highly polar, water soluble organics. To re-evaluate the relationship between root uptake and chemical hydrophobicity, TSCFs were measured for 25 organic chemicals ranging in log Kow from -0.8 to 5 using a pressure chamber technique. Using the TSCF values measured in this study, a new empirical relationship between TSCF (0 and 1) and log Kow (-0.8 to 5) is presented that indicates that nonionizable, polar, highly water soluble organic compounds are most likely to be taken up by plant roots and translocated to shoot tissue.

  20. Dieldrin uptake and translocation in plants growing in hydroponic medium.

    PubMed

    Murano, Hirotatsu; Otani, Takashi; Seike, Nobuyasu; Sakai, Mizuki

    2010-01-01

    It has been known that the Cucurbitaceae family takes up a large amount of persistent organic pollutants from soils and that the translocation of those compounds in cucurbits is higher than those in non-cucurbits. To understand the persistent organic pollutant uptake mechanisms of plant species, we compared the dieldrin absorption and transportation potentials of several plants in hydroponic medium. Sorghum (Sorghum vulgare Moench), sunflower (Helianthus annuus L.), soybean (Glycine max), komatsuna (Brassica rapa var. peruviridis), white-flowered gourd (Lagenaria siceraria var. hispida), cucumber (Cucumis sativus L.), and zucchini (Cucurbita pepo L.) were grown in a dieldrin-added hydroponic medium for 10 d, and then the amount of dieldrin in their shoots and roots was measured. All of the roots contained dieldrin, whereas only the cucurbits (white-flowered gourd, cucumber, and zucchini) contained considerable amounts of dieldrin in their shoots. The dieldrin uptake to the roots depended on the concentration of the n-hexane soluble components in the roots, regardless of whether the dieldrin in the roots was translocated to shoots or not. The dieldrin uptake from the solution to the roots was thought to be due to a passive response, such as adsorption on the roots. The translocation of dieldrin from the roots to the shoots was probably through the xylems. The amounts of dieldrin in the shoots per transpiration rates were higher for cucurbits than for non-cucurbits. It seems likely that cucurbits have uptake mechanisms for hydrophobic organic chemicals.

  1. Comparative uptake of enteric viruses into spinach and green onions.

    PubMed

    Hirneisen, Kirsten A; Kniel, Kalmia E

    2013-03-01

    Root uptake of enteric pathogens and subsequent internalization has been a produce safety concern and is being investigated as a potential route of pre-harvest contamination. The objective of this study was to determine the ability of hepatitis A virus (HAV) and the human norovirus surrogate, murine norovirus (MNV), to internalize in spinach and green onions through root uptake in both soil and hydroponic systems. HAV or MNV was inoculated into soil matrices or into two hydroponic systems, floating and nutrient film technique systems. Viruses present within spinach and green onions were detected by RT-qPCR or infectivity assays after inactivating externally present viruses with Virkon(®). HAV and MNV were not detected in green onion plants grown up to 20 days and HAV was detected in only 1 of 64 spinach plants grown in contaminated soil substrate systems up to 20 days. Compared to soil systems, a drastic difference in virus internalization was observed in hydroponic systems; HAV or pressure-treated HAV and MNV were internalized up to 4 log RT-qPCR units and internalized MNV was shown to remain infectious. Understanding the interactions of human enteric viruses on produce can aid in the elucidation of the mechanisms of attachment and internalization, and aid in understanding risks associated with contamination events. PMID:23412715

  2. Mathematical modelling of plant water and nutrient uptake

    NASA Astrophysics Data System (ADS)

    Roose, Tiina

    2010-05-01

    In this presentation I will describe a model of plant water and nutrient uptake and how to translate this model and experimental data from the single root scale to the root branching structure scale. The model starts at the single root scale and describes the water and nutrient movement in the soil using Richards' equation (water uptake) and diffusion-convection equation (nutrient uptake). The water and nutrient uptake in the single root scale model is represented by boundary conditions. In the case of nutrient uptake this has the form of a non-linear Michaelis-Menten uptake law and in the case of water this is given by a soil-xylem pressure difference boundary condition. The flow of water in the xylem is modeled as Poiseuille flow. We solve the single root scale models using the analytic approximate technique of asymptotic expansions similar to Oseen expansions known from fluid dynamics. We will then discuss how to use the analytic expression to estimate the water and nutrient uptake by growing root branching systems. We model the growth of the root system using a dynamic population model to describe the branching and elongation of roots in the branching system. This root branching population model results in a hyperbolic equation similar to age dependent population models and it can be solved fully analytically using the method of characteristics. Thus we have a fully analytic description of the root branching system evolution. We use this branching model to estimate the nutrient uptake in a scenario when the competition between subbranches is small, i.e., as it is in the case of phosphate, potassium and arsenic. We compare our approximate analytic model to a full 3d simulation of the root system phosphate uptake and find that the analytic model almost perfectly reproduces the 3d numerical model. In addition the analytic model can be included in larger field/catchment/climate scale models something which is not practically possible with the numerical simulations

  3. Radiostrontium uptake by plants from different soil types in Kazakhstan.

    PubMed

    Savinkov, A; Semioshkina, N; Howard, B J; Voigt, G

    2007-02-01

    The transfer of 90Sr to a range of different plant species grown on a range of different soil types in Kazakhstan, including three from the Semipalatinsk Test Site (STS), has been measured in a lysimeter experiment. 90Sr uptake by Stipa spp was significantly higher than for other vegetation species. The uptake of 90Sr from chernozem was significantly lower than that from the other soil types which is consistent with other literature. There was a significant negative relationship between 90Sr uptake and calcium, humus and CEC concentration in the soil for Agropyrum spp, Artemisia spp but not for Stipa spp or Bromus spp. The transfer to vegetation from soil has been quantified using the aggregated transfer coefficients for each species. Tag values range from 0.6 to 11.9 m2 kg-1x10(-3) over all measurements. The transfer of 90Sr to plants from the Kazakh soils was low compared to previously reported data and to that given from literature reviews.

  4. Warming decreased and grazing increased plant uptake of amino acids in an alpine meadow.

    PubMed

    Ma, Shuang; Zhu, Xiaoxue; Zhang, Jing; Zhang, Lirong; Che, Rongxiao; Wang, Fang; Liu, Hanke; Niu, Haishan; Wang, Shiping; Cui, Xiaoyong

    2015-09-01

    Organic nitrogen (N) uptake by plants has been recognized as a significant component of terrestrial N cycle. Several studies indicated that plants have the ability to switch their preference between inorganic and organic forms of N in diverse environments; however, research on plant community response in organic nitrogen uptake to warming and grazing is scarce. Here, we demonstrated that organic N uptake by an alpine plant community decreased under warming with (13)C-(15)N-enriched glycine addition method. After 6 years of treatment, warming decreased plant organic N uptake by 37% as compared to control treatment. Under the condition of grazing, warming reduced plant organic N uptake by 44%. Grazing alone significantly increased organic N absorption by 15%, whereas under warming condition grazing did not affect organic N uptake by the Kobresia humilis community on Tibetan Plateau. Besides, soil NO 3-N content explained more than 70% of the variability observed in glycine uptake, and C:N ratio in soil dissolved organic matter remarkably increased under warming treatment. These results suggested warming promoted soil microbial activity and dissolved organic N mineralization. Grazing stimulated organic N uptake by plants, which counteracted the effect of warming. PMID:26442646

  5. Zinc uptake by young wheat plants under two transpiration regimes

    SciTech Connect

    Grifferty, A.; Barrington, S.

    2000-04-01

    Treated wastewater for crop irrigation is an alternative for countries with a shortage of fresh water. Such practice requires strict wastewater application criteria and a better understanding of the effects of transpiration rate on plant heavy metal uptake. The experiment measured Zn uptake by young wheat plants (Triticum aestvum L.) grown in triplicated experimental pots and held in two growth chambers with constant environmental conditions (relative humidity, light and temperature) but with a different air water vapor pressure deficit to produce two different transpiration rates. After 5 wk of growth in a greenhouse, the plants were transferred to the controlled chambers and irrigated using a fertilized solution with five different levels of Zn: 0, 2, 10, 25, and 50 mg/L. These Zn levels were low enough to have no significant effect on plant growth and transpiration rate. The wheat plants started to produce their grain at 6 wk. Plants were collected at 0, 3, and 10 d of incubation in the controlled chambers and analyzed for dry matter and total Zn content. The pots were weighed daily to measure their transpiration rates. On Day 10, the remaining plants were collected and their roots, shoots, and grain were separated, weighed, dried, and analyzed for total Zn. Time and plant transpiration rate were found to affect significantly plant Zn uptake. The higher transpiration rate enhanced plant Zn uptake. The roots had the highest Zn uptake followed by the shoots and then the grain.

  6. Biosolids inhibit bioavailability and plant uptake of triclosan and triclocarban.

    PubMed

    Fu, Qiuguo; Wu, Xiaoqin; Ye, Qingfu; Ernst, Fredrick; Gan, Jay

    2016-10-01

    Biosolids from wastewater treatment are primarily disposed of via land applications, where numerous pharmaceuticals and personal care products (PPCPs) may contaminate food crops and pose a human exposure risk. Biosolids are rich in organic carbon and addition of biosolids can increase the sorption of certain PPCPs in soil, decreasing their bioavailability. This study tested the hypothesis that the relative plant uptake of PPCPs decreases with increasing biosolids amendment. Accumulation of triclosan and triclocarban was measured in roots of radish and carrot grown in soils with or without biosolids. Addition of biosolids significantly prolonged the persistence of triclosan in soil. When expressed in bioaccumulation factor (BCF), accumulation of triclosan drastically decreased in biosolids-amended soils, while the effect was limited for triclocarban. Compared to the unamended soil, amending biosolids at 2% (w/w) decreased BCF of triclosan in the edible tissues of radish and carrot by 85.4 and 89.3%, respectively. Measurement using a thin-film passive sampler provided direct evidence showing that the availability of triclosan greatly decreased in biosolids-amended soils. Partial correlation analysis using data from this and published studies validated that biosolids decreased plant uptake primarily by increasing soil organic carbon content and subsequently sorption. Therefore, contamination of food crops by biosolids-borne contaminants does not linearly depend on biosolids use rates. This finding bears significant implications in the overall risk evaluation of biosolids-borne contaminants. PMID:27337347

  7. Mapping the Metal Uptake in Plants from Jasper Ridge Biological Preserve - Oral Presentation

    SciTech Connect

    Lo, Allison

    2015-08-24

    Serpentine soil originates in the Earth’s mantle and contains high concentrations of potentially toxic transition metals. Although serpentine soil limits plant growth, endemic and adapted plants at Jasper Ridge Biological Preserve, located behind SLAC National Accelerator Laboratory, can tolerate these conditions. Serpentine soil and seeds belonging to native California and invasive plants were collected at Jasper Ridge. The seeds were grown hydroponically and on serpentine and potting soil to examine the uptake and distribution of ions in the roots and shoots using synchrotron micro-focused X-ray fluorescence spectroscopy. The results were used to determine differences between serpentinetolerant plants. Rye grown on potting soil was enriched in Ni, Fe, Mn, and Cr compared to purple needlegrass grown on serpentine soil. Serpentine vegetation equally suppressed the uptake of Mn, Ni, and Fe in the roots and shoots. The uptake of Ca and Mg affected the uptake of other elements such as K, S, and P.

  8. Plant water relations I: uptake and transport

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Plants, like all living things, are mostly water. Water is the matrix of life, and its availability determines the distribution and productivity of plants on earth. Vascular plants evolved structures that enable them to transport water long distances with little input of energy, but the hollow trach...

  9. Uptake by plants of radionuclides from FUSRAP waste materials

    SciTech Connect

    Knight, M.J.

    1983-04-01

    Radionuclides from FUSRAP wastes potentially may be taken up by plants during remedial action activities and permanent near-surface burial of contaminated materials. In order to better understand the propensity of radionuclides to accumulate in plant tissue, soil and plant factors influencing the uptake and accumulation of radionuclides by plants are reviewed. In addition, data describing the uptake of the principal radionuclides present in FUSRAP wastes (uranium-238, thorium-230, radium-226, lead-210, and polonium-210) are summarized. All five radionuclides can accumulate in plant root tissue to some extent, and there is potential for the translocation and accumulation of these radionuclides in plant shoot tissue. Of these five radionuclides, radium-226 appears to have the greatest potential for translocation and accumulation in plant shoot tissue. 28 references, 1 figure, 3 tables.

  10. Uptake rate of nitrogen dioxide by potato plants

    SciTech Connect

    Sinn, J.P.; Pell, E.J.; Kabel, R.L.

    1984-06-01

    Greenhouse-grown potato plants were exposed to nitrogen dioxide in an exposure chamber to determine the rate of NO/sub 2/ uptake at concentrations from 228 to 817 ..mu..g/m/sup 3/ (0.12-0.43 ppm). Results show that a consistent increase in uptake rate accompanied an increase in NO/sub 2/ exposure concentrations. Exposure in the range of concentration had no significant effect on leaf diffusive resistance.

  11. Nitrogen Uptake Preferences by Plants in Arid and Semiarid Ecosystems

    NASA Astrophysics Data System (ADS)

    Macko, S.; Wang, L.; D'Odorico, P.

    2005-12-01

    In arid and semiarid ecosystems like African savannas, nutrient availability varies spatially and temporally and nutrients are considered to be a major limiting factor for growth in addition to water availability. Preference for different nitrogen forms presumably enhances the survivorship and fitness of plants since the relative abundances of nitrate and ammonium varies between drier and wetter areas. To test the hypothesis that species developing in dry areas will prefer nitrate whereas species growing in wet areas will prefer ammonium, a controlled experiment using a greenhouse was undertaken. Six native African grass species from different precipitation regimes were used in this study. Two species were from relatively wet areas (Pandamatenga, Botswana, precipitation = 698 mm/year), two were from relatively dry areas (Tshane, Botswana, precipitation = 232 mm/year) and other two were from intermediate environments (Ghanzi, Botswana, precipitation = 400 mm/year). The grass seeds were collected in the field during the dry season of 2004 and using germination pans, were grown in a greenhouse. When individuals were mature, they were transferred into plastic pots (one individual per pot) containing commercial sand. After one week period of adjustment, a 15N labeled fertilizer (NH4NO3) was applied. The total N applied as fertilizer was comparable to the mineralized field N based on a calculated rate for the top 15 cm of soil. A pair of individual plants was treated as an experimental unit. Each plant received the same amount of total N fertilizer, but one was 15NO3 labeled and another was 15NH4 labeled. Nutrient uptake preference was determined by the 15N difference between pairs. The preliminary results with three species shows that, the individuals from dry area ( Enneapogon cenchroides from Tshane) has significantly higher foliar 15N signatures in the 15NO3 labeling treatment (p = 0.0103) and no difference in root 15N signatures. Whereas individuals from the wet

  12. Cyclic Variations in Nitrogen Uptake Rate of Soybean Plants 1

    PubMed Central

    Henry, Leslie Tolley; Raper, C. David

    1989-01-01

    When NO3− is the sole nitrogen source in flowing solution culture, the net rate of nitrogen uptake by nonnodulated soybean (Glycine max L. Merr. cv Ransom) plants cycles between maxima and minima with a periodicity of oscillation that corresponds with the interval of leaf emergence. Since soybean plants accumulate similar quantities of nitrogen when either NH4+ or NO3− is the sole source in solution culture controlled at pH 6.0, an experiment was conducted to determine if the oscillations in net rate of nitrogen uptake also occur when NH4+ is the nitrogen source. During a 21-day period of vegetative development, net uptake of NH4+ was measured daily by ion chromatography as depletion of NH4+ from a replenished nutrient solution containing 1.0 millimolar NH4+. The net rate of NH4+ uptake oscillated with a periodicity that was similar to the interval of leaf emergence. Instances of negative net rates of uptake indicate that the transition between maxima and minima involved changes in influx and efflux components of net NH4+ uptake. PMID:11537458

  13. Myo-Inositol-Dependent Sodium Uptake in Ice Plant1

    PubMed Central

    Nelson, Donald E.; Koukoumanos, Michelle; Bohnert, Hans J.

    1999-01-01

    In salt-stressed ice plants (Mesembryanthemum crystallinum), sodium accumulates to high concentrations in vacuoles, and polyols (myo-inositol, d-ononitol, and d-pinitol) accumulate in the cytosol. Polyol synthesis is regulated by NaCl and involves induction and repression of gene expression (D.E. Nelson, B. Shen, and H.J. Bohnert [1998] Plant Cell 10: 753–764). In the study reported here we found increased phloem transport of myo-inositol and reciprocal increased transport of sodium and inositol to leaves under stress. To determine the relationship between increased translocation and sodium uptake, we analyzed the effects of exogenous application of myo-inositol: The NaCl-inducible ice plant myo-inositol 1-phosphate synthase is repressed in roots, and sodium uptake from root to shoot increases without stimulating growth. Sodium uptake and transport through the xylem was coupled to a 10-fold increase of myo-inositol and ononitol in the xylem. Seedlings of the ice plant are not salt-tolerant, and yet the addition of exogenous myo-inositol conferred upon them patterns of gene expression and polyol accumulation observed in mature, salt-tolerant plants. Sodium uptake and transport through the xylem was enhanced in the presence of myo-inositol. The results indicate an interdependence of sodium uptake and alterations in the distribution of myo-inositol. We hypothesize that myo-inositol could serve not only as a substrate for the production of compatible solutes but also as a leaf-to-root signal that promotes sodium uptake. PMID:9880357

  14. Uptake of tritium by plants from atmosphere and soil

    SciTech Connect

    Amano, H; Garten Jr, Charles T

    1991-01-01

    Uptake of tritiated water (HTO) by plants was examined under field conditions when tritium was available to leaves from only the atmosphere and when tritium was available from both the soil (root uptake) and the atmosphere. Maple, oak, and elm trees, planted in clean soil, were transported to a tritium-contaminated forest, where the atmospheric tritium concentration was elevated, to examine HTO uptake by tree leaves when the source was only in the atmosphere. The results partially agreed with a diffusion model of tritium uptake by plants. Discrepancies found between predicted and measured leaf HTO/air HTO ratios should be attributed to the existence of some isolated water, which is isolated from the transpiration stream in the leaves, that was not available for rapid turnover. The uptake of tritium by trees, when the source was both in the soil and atmosphere, was also examined using deciduous trees (maple and elm) resident to the tritium-contaminated forest. The results were in agreement with a prediction model.

  15. Water uptake efficiency of a maize plant - A simulation case study

    NASA Astrophysics Data System (ADS)

    Meunier, Félicien; Leitner, Daniel; Bodner, Gernot; Javaux, Mathieu; Schnepf, Andrea

    2014-05-01

    Water uptake by plant roots is a complex mechanism controlled by biological and physical properties of the soil-plant-atmosphere system and affects a major component of the water cycle, transpiration. This uptake of water by plants is one of the major factors of plant development. Since water uptake occurs at the roots, root architecture and hydraulic properties both play a crucial role in plant productivity. A fundamental understanding of the main processes of water uptake will enable better breeding of drought resistant plants and the improvement of irrigation strategies. In this work we analyzed the differences of root water uptake between idealized genotypes of a plant using mathematical modelling The numerical simulations were performed by the R-SWMS software (Javaux et al., 2008). The model describes 3-D water movement in soil by solving Richard's equation with a sink term representing root uptake. Water flow within the root xylem network and between soil and root is modelled based on water pressure gradients and calculated according to Doussan's model. The sink term is calculated by integration of local uptakes within rooted representative elementary volumes of soil. The plant water demand is described by a boundary condition at the base of the shoot. We compare the water uptake efficiency of three types of root system architectures of a maize plant. Two are actual architectures from genotypes showing significant differences regarding the internodal distance, the root growth rate and the insertion angle of their primary roots. The third one is an ideotype according to Lynch of the maize plant designed to perform better in one dry environment. We generated with RootBox five repetitions of these three root systems with the same total root volume and simulated two drought scenarios at the flowering stage (lack of water at the top or at the bottom of the soil domain). We did these simulations for two distinct distributions of local conductivities of root

  16. Mining iron: iron uptake and transport in plants.

    PubMed

    Kim, Sun A; Guerinot, Mary Lou

    2007-05-25

    Iron uptake in plants is highly regulated in order to supply amounts sufficient for optimal growth while preventing excess accumulation. In response to iron deficiency, plants induce either reduction-based or chelation-based mechanisms to enhance iron uptake from the soil. Genes involved in each mechanism have been identified from various model plants including Arabidopsis and rice. Iron transport within plants is also tightly controlled. New information has emerged on transporters that play a role in xylem loading and phloem loading/unloading of iron, and on the iron chelators involved in iron homeostasis. Some of the components regulating iron deficiency responses also have been elucidated, demonstrating that iron dependent gene regulation occurs at both the transcriptional and post-transcriptional levels. PMID:17485078

  17. Fate and Uptake of Pharmaceuticals in Soil–Plant Systems

    PubMed Central

    2014-01-01

    Pharmaceuticals have been detected in the soil environment where there is the potential for uptake into crops. This study explored the fate and uptake of pharmaceuticals (carbamazepine, diclofenac, fluoxetine, propranolol, sulfamethazine) and a personal care product (triclosan) in soil–plant systems using radish (Raphanus sativus) and ryegrass (Lolium perenne). Five of the six chemicals were detected in plant tissue. Carbamazepine was taken up to the greatest extent in both the radish (52 μg/g) and ryegrass (33 μg/g), whereas sulfamethazine uptake was below the limit of quantitation (LOQ) (<0.01 μg/g). In the soil, concentrations of diclofenac and sulfamethazine dropped below the LOQ after 7 days. However, all pharmaceuticals were still detectable in the pore water at the end of the experiment. The results demonstrate the ability of plant species to accumulate pharmaceuticals from soils with uptake apparently specific to both plant species and chemical. Results can be partly explained by the hydrophobicity and extent of ionization of each chemical in the soil. PMID:24405013

  18. Interaction of carbon nanohorns with plants: Uptake and biological effects

    SciTech Connect

    Lahiani, Mohamed H.; Chen, Jihua; Irin, Fahmida; Puretzky, Alexander A.; Green, Micah J.; Khodakovskaya, Mariya V.

    2014-10-07

    Single-Walled Carbon Nanohorns (SWCNHs) are a unique carbon-based nanomaterial with promising application in different fields including, medicine, genetic engineering and horticulture. Here, we investigated the biological response of six crop species (barley, corn, rice, soybean, switchgrass, tomato) and tobacco cell culture to the exposure of SWCNHs. We found that SWCNHs can activate seed germination of selected crops and enhance growth of different organs of corn, tomato, rice and soybean. At cellular level, growth of tobacco cells was increased in response to exposure of SWCNHs (78% increase compared to control). Uptake of SWCNHs by exposed crops and tobacco cells was confirmed by transmission electron microscopy (TEM) and quantified by microwave induced heating (MIH) technique. At genetic level, SWCNHs were able to affect expression of a number of tomato genes that are involved in stress responses, cellular responses and metabolic processes. Our conclusion is that SWCNHs can be used as plant growth regulators and have the potential for plant-related applications.

  19. Interaction of carbon nanohorns with plants: Uptake and biological effects

    DOE PAGESBeta

    Lahiani, Mohamed H.; Chen, Jihua; Irin, Fahmida; Puretzky, Alexander A.; Green, Micah J.; Khodakovskaya, Mariya V.

    2014-10-07

    Single-Walled Carbon Nanohorns (SWCNHs) are a unique carbon-based nanomaterial with promising application in different fields including, medicine, genetic engineering and horticulture. Here, we investigated the biological response of six crop species (barley, corn, rice, soybean, switchgrass, tomato) and tobacco cell culture to the exposure of SWCNHs. We found that SWCNHs can activate seed germination of selected crops and enhance growth of different organs of corn, tomato, rice and soybean. At cellular level, growth of tobacco cells was increased in response to exposure of SWCNHs (78% increase compared to control). Uptake of SWCNHs by exposed crops and tobacco cells was confirmedmore » by transmission electron microscopy (TEM) and quantified by microwave induced heating (MIH) technique. At genetic level, SWCNHs were able to affect expression of a number of tomato genes that are involved in stress responses, cellular responses and metabolic processes. Our conclusion is that SWCNHs can be used as plant growth regulators and have the potential for plant-related applications.« less

  20. Uptake of nitrate, ammonium and glycine by plants of Tasmanian wet eucalypt forests.

    PubMed

    Warren, C R; Adams, P R

    2007-03-01

    A central assumption of ecosystem N cycling has been that organic N must be converted to inorganic N to be available for plant uptake, but this has been questioned by recent studies. We examined uptake of nitrate, ammonium and the amino acid glycine in three species from Eucalyptus obliqua L'Her. wet forest in Tasmania, south-eastern Australia, to test the hypothesis that all three species can take up glycine, and to compare rates of glycine uptake with rates of uptake of nitrate and ammonium uptake. The alternative hypothesis that species vary in their preference for nitrate, ammonium and glycine ("niche differentiation") was also examined. Measurements were made on the canopy dominant Eucalyptus obliqua, and two rain forest tree species found in the understory or as sub-dominants of the canopy, Nothofagus cunninghamii (Hook.) Oerst. and Phyllocladus aspleniifolius (Labill.) Hook.f. Nitrogen uptake was examined in situ with attached roots placed in uptake solutions containing equimolar concentrations (100 micromol l(-1)) of (15)N-nitrate, (15)N-ammonium and 2-(13)C(2) (15)N-glycine. Species did not differ in their preference for different forms of N (species x N form interaction, P > 0.05), and thus there was no evidence of niche differentiation. In all species, rates of uptake were highest for ammonium (11 +/- 5 micromol g(DM) (-1) h(-1); mean +/- SD, n = 108), uptake of glycine occurred at less than half this rate (4.4 +/- 2.6 micromol g(DM) (-1) h(-1)), whereas uptake of nitrate occurred at one-tenth of this rate (0.9 +/- 1.2 micromol g(DM) (-1) h(-1)). The strong positive relationship between (15)N and (13)C uptake indicated that at least 72% of glycine-N was taken up intact. These findings indicate the potential for considerable uptake of organic N in the field.

  1. Macroscopic modeling of plant water uptake: soil and root resistances

    NASA Astrophysics Data System (ADS)

    Vogel, Tomas; Votrubova, Jana; Dohnal, Michal; Dusek, Jaromir

    2014-05-01

    The macroscopic physically-based plant root water uptake (RWU) model, based on water-potential-gradient formulation (Vogel et al., 2013), was used to simulate the observed soil-plant-atmosphere interactions at a forest site located in a temperate humid climate of central Europe and to gain an improved insight into the mutual interplay of RWU parameters that affects the soil water distribution in the root zone. In the applied RWU model, the uptake rates are directly proportional to the potential gradient and indirectly proportional to the local soil and root resistances to water flow. The RWU algorithm is implemented in a one-dimensional dual-continuum model of soil water flow based on Richards' equation. The RWU model is defined by four parameters (root length density distribution, average active root radius, radial root resistance, and the threshold value of the root xylem potential). In addition, soil resistance to water extraction by roots is related to soil hydraulic conductivity function and actual soil water content. The RWU model is capable of simulating both the compensatory root water uptake, in situations when reduced uptake from dry layers is compensated by increased uptake from wetter layers, and the root-mediated hydraulic redistribution of soil water, contributing to more natural soil moisture distribution throughout the root zone. The present study focusses on the sensitivity analysis of the combined soil water flow and RWU model responses in respect to variations of RWU model parameters. Vogel T., M. Dohnal, J. Dusek, J. Votrubova, and M. Tesar. 2013. Macroscopic modeling of plant water uptake in a forest stand involving root-mediated soil-water redistribution. Vadose Zone Journal, 12, 10.2136/vzj2012.0154.

  2. Phytozome Comparative Plant Genomics Portal

    SciTech Connect

    Goodstein, David; Batra, Sajeev; Carlson, Joseph; Hayes, Richard; Phillips, Jeremy; Shu, Shengqiang; Schmutz, Jeremy; Rokhsar, Daniel

    2014-09-09

    The Dept. of Energy Joint Genome Institute is a genomics user facility supporting DOE mission science in the areas of Bioenergy, Carbon Cycling, and Biogeochemistry. The Plant Program at the JGI applies genomic, analytical, computational and informatics platforms and methods to: 1. Understand and accelerate the improvement (domestication) of bioenergy crops 2. Characterize and moderate plant response to climate change 3. Use comparative genomics to identify constrained elements and infer gene function 4. Build high quality genomic resource platforms of JGI Plant Flagship genomes for functional and experimental work 5. Expand functional genomic resources for Plant Flagship genomes

  3. Composition of hydroponic medium affects thorium uptake by tobacco plants.

    PubMed

    Soudek, Petr; Kufner, Daniel; Petrová, Sárka; Mihaljevič, Martin; Vaněk, Tomáš

    2013-08-01

    The ability of thorium uptake as well as responses to heavy metal stress were tested in tobacco cultivar La Burley 21. Thorium was accumulated preferentially in the root system. The presence of citric, tartaric and oxalic acids in hydroponic medium increased thorium accumulation in all plant organs. On the other hand, the addition of diamines and polyamines, the important antioxidants in plants, resulted in decrease of thorium accumulation, especially in the root system. Negative correlation was found between putrescine concentration and thorium accumulation. Nevertheless, the most important factor influencing the accumulation of thorium was the absence of phosphate ions in a hydroponic medium that caused more than 10-fold increase of thorium uptake in all plant parts. Accumulation and distribution of thorium was followed in six cultivars and 14 selected transformants. Cultivar La Barley 21 represented an average between the tested genotypes, having a very good distribution ratio between roots, stems and leaves.

  4. Interactions between uptake of amino acids and inorganic nitrogen in wheat plants

    NASA Astrophysics Data System (ADS)

    Gioseffi, E.; de Neergaard, A.; Schjoerring, J. K.

    2012-04-01

    Soil-borne amino acids may constitute a source of nitrogen (N) for plants in various terrestrial ecosystems but their importance for total N nutrition is unclear, particularly in nutrient-rich arable soils. One reason for this uncertainty is lack of information on how the absorption of amino acids by plant roots is affected by the simultaneous presence of inorganic N forms. The objective of the present study was to study absorption of glycine (Gly) and glutamine (Gln) by wheat roots and their interactions with nitrate (NO3-) and ammonium (NH4+) during uptake. The underlying hypothesis was that amino acids, when present in nutrient solution together with inorganic N, may lead to down-regulation of the inorganic N uptake, thereby resulting in similar total N uptake rates. Amino acids were enriched with double-labelled 15N and 13C, while NO3- and NH4+ acquisition was determined by their rate of removal from the nutrient solution surrounding the roots. The uptake rates of NO3- and NH4+ did not differ from each other and were generally about twice as high as the uptake rate of organic N when the different N forms were supplied separately in concentrations of 2 mM. Nevertheless, replacement of 50% of the inorganic N with organic N was able to restore the N uptake to the same level as that in the presence of only inorganic N. Co-provision of NO3- did not affect glycine uptake, while the presence of glycine down-regulated NO3- uptake. The ratio between 13C and 15N were lower in shoots than in roots and also lower than the theoretical values, reflecting higher C losses via respiratory processes compared to N losses. It is concluded that organic N can constitute a significant N-source for wheat plants and that there is an interaction between the uptake of inorganic and organic N.

  5. A proton transfer reaction mass spectrometry based system for determining plant uptake of volatile organic compounds

    NASA Astrophysics Data System (ADS)

    Tani, Akira; Kato, Shungo; Kajii, Yoshizumi; Wilkinson, Michael; Owen, Sue; Hewitt, Nick

    In order to evaluate the contribution that higher plants make to the removal of volatile organic compounds from the atmosphere, a measurement system consisting of a proton transfer reaction mass spectrometer (PTR-MS), CO 2 analyzer, diffusion devise and leaf enclosure was established. The uptake of VOCs by Golden Pothos ( Epipremnum aureum) was investigated. The overall relative error associated with measurements made using this system was <2.2% when a Golden Pothos leaf was exposed to 75-750 ppbv of methyl isobutyl ketone (MIBK). Even at the lowest MIBK concentration, more than 2.2% of the inflowing VOC was lost to the leaf, representing a detectable and positive MIBK uptake rate by the plant. The results of the investigation were compared with a measurement system based on gas chromatography analysis and it was shown that the use of a PTR-MS based system can significantly increase the certainties in determining the rate of VOC uptake by plants.

  6. Plant uptake of pentachlorophenol from sludge-amended soils

    SciTech Connect

    Bellin, C.A.; O'Connor, G.A.

    1990-01-01

    A greenhouse study was conducted to determine the effects of sludge on plant uptake of {sup 14}C-pentachlorophenol (PCP). Plants included tall fescue (Festuca arundinacea Schreb.), lettuce (Latuca sativa L.), carrot (Daucus carota L.), and chile pepper (Capsicum annum L.). Minimal intact PCP was detected in the fescue and lettuce by gas chromatography/mass spectrometry (GC/MS) analysis. No intact PCP was detected in the carrot tissue extracts. Chile pepper was not analyzed for intact PCP because methylene chloride extracts contained minimal {sup 14}C. The GC/MS analysis of soil extracts at harvest suggests a half-life of PCP of about 10 d independent of sludge rate or PCP loading rate. Rapid degradation of PCP in the soil apparently limited PCP availability to the plant. Bioconcentration factors (dry plant wt./initial soil PCP concentration) based on intact PCP were <0.01 for all crops, suggesting little PCP uptake. Thus, food-chain crop PCP uptake in these alkaline soils should not limit land application of sludge.

  7. Selected Phytochemicals and Culinary Plant Extracts Inhibit Fructose Uptake in Caco-2 Cells.

    PubMed

    Lee, Yurim; Lim, Yeni; Kwon, Oran

    2015-09-18

    This study compared the ability of nine culinary plant extracts containing a wide array of phytochemicals to inhibit fructose uptake and then explored the involvement of intestinal fructose transporters and phytochemicals for selected samples. The chemical signature was characterized by high performance liquid chromatography with mass spectrometry. Inhibition of [(14)C]-fructose uptake was tested by using human intestinal Caco-2 cells. Then, the relative contribution of the two apical-facing intestinal fructose transporters, GLUT2 and GLUT5, and the signature components for fructose uptake inhibition was confirmed in naive, phloretin-treated and forskolin-treated Caco-2 cells. HPLC/MS analysis of the chemical signature revealed that guava leaf contained quercetin and catechin, and turmeric contained curcumin, bisdemethoxycurcumin and dimethoxycurcumin. Similar inhibition of fructose uptake (by ~50%) was observed with guava leaf and turmeric in Caco-2 cells, but with a higher contribution of GLUT2 for turmeric and that of GLUT5 for guava leaf. The data suggested that, in turmeric, demethoxycurcumin specifically contributed to GLUT2-mediated fructose uptake inhibition, and curcumin did the same to GLUT5-mediated fructose uptake inhibition, but GLUT2 inhibition was more potent. By contrast, in guava leaf, catechin specifically contributed to GLUT5-mediated fructose uptake inhibition, and quercetin affected both GLUT5- and GLUT2-mediated fructose uptake inhibition, resulting in the higher contribution of GLUT5. These results suggest that demethoxycurcumin is an important contributor to GLUT2-mediated fructose uptake inhibition for turmeric extract, and catechin is the same to GLUT5-mediated fructose uptake inhibition for guava leaf extract. Quercetin, curcumin and bisdemethoxycurcumin contributed to both GLUT5- and GLUT2-mediated fructose uptake inhibition, but the contribution to GLUT5 inhibition was higher than the contribution to GLUT2 inhibition.

  8. Selected Phytochemicals and Culinary Plant Extracts Inhibit Fructose Uptake in Caco-2 Cells.

    PubMed

    Lee, Yurim; Lim, Yeni; Kwon, Oran

    2015-01-01

    This study compared the ability of nine culinary plant extracts containing a wide array of phytochemicals to inhibit fructose uptake and then explored the involvement of intestinal fructose transporters and phytochemicals for selected samples. The chemical signature was characterized by high performance liquid chromatography with mass spectrometry. Inhibition of [(14)C]-fructose uptake was tested by using human intestinal Caco-2 cells. Then, the relative contribution of the two apical-facing intestinal fructose transporters, GLUT2 and GLUT5, and the signature components for fructose uptake inhibition was confirmed in naive, phloretin-treated and forskolin-treated Caco-2 cells. HPLC/MS analysis of the chemical signature revealed that guava leaf contained quercetin and catechin, and turmeric contained curcumin, bisdemethoxycurcumin and dimethoxycurcumin. Similar inhibition of fructose uptake (by ~50%) was observed with guava leaf and turmeric in Caco-2 cells, but with a higher contribution of GLUT2 for turmeric and that of GLUT5 for guava leaf. The data suggested that, in turmeric, demethoxycurcumin specifically contributed to GLUT2-mediated fructose uptake inhibition, and curcumin did the same to GLUT5-mediated fructose uptake inhibition, but GLUT2 inhibition was more potent. By contrast, in guava leaf, catechin specifically contributed to GLUT5-mediated fructose uptake inhibition, and quercetin affected both GLUT5- and GLUT2-mediated fructose uptake inhibition, resulting in the higher contribution of GLUT5. These results suggest that demethoxycurcumin is an important contributor to GLUT2-mediated fructose uptake inhibition for turmeric extract, and catechin is the same to GLUT5-mediated fructose uptake inhibition for guava leaf extract. Quercetin, curcumin and bisdemethoxycurcumin contributed to both GLUT5- and GLUT2-mediated fructose uptake inhibition, but the contribution to GLUT5 inhibition was higher than the contribution to GLUT2 inhibition. PMID:26393568

  9. Natural colloidal P and its contribution to plant P uptake.

    PubMed

    Montalvo, Daniela; Degryse, Fien; McLaughlin, Mike J

    2015-03-17

    Phosphorus (P) bioavailability depends on its concentration and speciation in solution. Andisols and Oxisols have very low soil solution concentration of free orthophosphate, as they contain high concentrations of strongly P-sorbing minerals (Al/Fe oxyhydroxides, allophanes). Free orthophosphate is the form of P taken up by plants, but it is not the only P species present in the soil solution. Natural colloidal P (P associated with Al, Fe, and organic matter of sizes ranging from 1 to 1000 nm) constitutes an important fraction of soil solution P in these soils; however, its availability has not been considered. We measured the uptake of P by wheat (Triticum aestivum) from radiolabeled nonfiltered (colloid-containing) and 3-kDa filtered (nearly colloid-free) soil-water extracts from Andisols and Oxisols. In the Andisol extracts, P uptake was up to 5-fold higher from the nonfiltered solutions than the corresponding 3-kDa filtered solutions. In the Oxisol extract, no difference in P uptake between both solutions was observed. Also the diffusional flux of P as measured with the DGT technique was larger in the nonfiltered than in the 3-kDa filtered solutions. Our results suggest that colloidal P from Andisols is not chemically inert and contributes to plant uptake of P. PMID:25719745

  10. Natural colloidal P and its contribution to plant P uptake.

    PubMed

    Montalvo, Daniela; Degryse, Fien; McLaughlin, Mike J

    2015-03-17

    Phosphorus (P) bioavailability depends on its concentration and speciation in solution. Andisols and Oxisols have very low soil solution concentration of free orthophosphate, as they contain high concentrations of strongly P-sorbing minerals (Al/Fe oxyhydroxides, allophanes). Free orthophosphate is the form of P taken up by plants, but it is not the only P species present in the soil solution. Natural colloidal P (P associated with Al, Fe, and organic matter of sizes ranging from 1 to 1000 nm) constitutes an important fraction of soil solution P in these soils; however, its availability has not been considered. We measured the uptake of P by wheat (Triticum aestivum) from radiolabeled nonfiltered (colloid-containing) and 3-kDa filtered (nearly colloid-free) soil-water extracts from Andisols and Oxisols. In the Andisol extracts, P uptake was up to 5-fold higher from the nonfiltered solutions than the corresponding 3-kDa filtered solutions. In the Oxisol extract, no difference in P uptake between both solutions was observed. Also the diffusional flux of P as measured with the DGT technique was larger in the nonfiltered than in the 3-kDa filtered solutions. Our results suggest that colloidal P from Andisols is not chemically inert and contributes to plant uptake of P.

  11. Simulation of the plant uptake of organophosphates and other emerging pollutants for greenhouse experiments and field conditions.

    PubMed

    Trapp, Stefan; Eggen, Trine

    2013-06-01

    The uptake of the organophosphates tris(2-chloroethyl) phosphate (TCEP), tris(1-chloro-2-propyl) phosphate (TCPP), tributyl phosphate (TBP), the insect repellant N,N-diethyl toluamide (DEET), and the plasticizer n-butyl benzenesulfonamide (NBBS) into plants was studied in greenhouse experiments and simulated with a dynamic physiological plant uptake model. The calibrated model was coupled to a tipping buckets soil transport model and a field scenario with sewage sludge application was simulated. High uptake of the polar, low-volatile compounds TCEP, TCPP, and DEET into plants was found, with highest concentrations in straw (leaves and stem). Uptake into carrot roots was high for TCPP and TBP. NBBS showed no high uptake but was rapidly degraded. Uptake into barley seeds was small. The pattern and levels of uptake could be reproduced by the model simulations, which indicates mainly passive uptake and transport (i.e., by the transpiration stream, with the water) into and within the plants. Also the field simulations predicted a high uptake from soil into plants of TCEP, TCPP, and DEET, while TBP is more likely taken up from air. The BCF values measured and calculated in the greenhouse study are in most cases comparable to the calculated values of the field scenario, which demonstrates that greenhouse studies can be suitable for predicting the behavior of chemicals in the field. Organophosphates have a high potential for bioaccumulation in crops and reach agricultural fields both via sewage sludge and by atmospheric deposition.

  12. Cyclic variations in nitrogen uptake rate in soybean plants: uptake during reproductive growth

    NASA Technical Reports Server (NTRS)

    Vessey, J. K.; Raper, C. D. Jr; Henry, L. T.; Raper CD, J. r. (Principal Investigator)

    1990-01-01

    Net uptake of NO3- by non-nodulated soybean plants [Glycine max (L.) Merr. cv. Ransom] growing in flowing hydroponic culture was measured daily during a 63 d period of reproductive development between the first florally inductive photoperiod and [unknown word] seed growth. Removal of NO3- from a replenished solution containing 1.0 mol m-3 NO3- was determined by ion chromatography. Uptake of NO3- continued throughout reproductive development. The net uptake rate of NO3- cycled between maxima and minima with a periodicity of oscillation of 3 to 7 d during the floral stage and about 6 d during the fruiting stage. Coupled with increasing concentrations of carbon and C : N ratios in tissues, the oscillations in net uptake rates of NO3- are evidence that the demand for carbohydrate by reproductive organs is contingent on the availability of nitrogen in the shoot pool rather than that the demand for nitrogen follows the flux of carbohydrate into reproductive tissues.

  13. Uptake of antibiotics from irrigation water by plants.

    PubMed

    Azanu, David; Mortey, Christiana; Darko, Godfred; Weisser, Johan Juhl; Styrishave, Bjarne; Abaidoo, Robert Clement

    2016-08-01

    The capacity of carrot (Daucus corota L.) and lettuce (Lactuca sativa L.), two plants that are usually eaten raw, to uptake tetracycline and amoxicillin (two commonly used antibiotics) from irrigated water was investigated in order to assess the indirect human exposure to antibiotics through consumption of uncooked vegetables. Antibiotics in potted plants that had been irrigated with known concentrations of the antibiotics were extracted using accelerated solvent extraction and analyzed on a liquid chromatograph-tandem mass spectrometer. The plants absorbed the antibiotics from water in all tested concentrations of 0.1-15 mg L(-1). Tetracycline was detected in all plant samples, at concentrations ranging from 4.4 to 28.3 ng/g in lettuce and 12.0-36.8 ng g(-1) fresh weight in carrots. Amoxicillin showed absorption with concentrations ranging from 13.7 ng g(-1) to 45.2 ng g(-1) for the plant samples. The mean concentration of amoxicillin (27.1 ng g(-1)) in all the samples was significantly higher (p = 0.04) than that of tetracycline (20.2 ng g(-1)) indicating higher uptake of amoxicillin than tetracycline. This suggests that the low antibiotic concentrations found in plants could be important for causing antibiotics resistance when these levels are consumed. PMID:27213239

  14. Uptake and Metabolism of Phthalate Esters by Edible Plants.

    PubMed

    Sun, Jianqiang; Wu, Xiaoqin; Gan, Jay

    2015-07-21

    Phthalate esters (PAEs) are large-volume chemicals and are found ubiquitously in soil as a result of widespread plasticulture and waste disposal. Food plants such as vegetables may take up and accumulate PAEs from soil, potentially imposing human health risks through dietary intake. In this study, we carried out a cultivation study using lettuce, strawberry, and carrot plants to determine the potential of plant uptake, translocation, and metabolism of di-n-butyl phthalate (DnBP) and di(2-ethylhexyl) phthalate (DEHP) and their primary metabolites mono-n-butyl phthalate (MnBP) and mono(2-ethylhexyl) phthalate (MEHP). All four compounds were detected in the plant tissues, with the bioconcentration factors (BCFs) ranging from 0.16 ± 0.01 to 4.78 ± 0.59. However, the test compounds were poorly translocated from roots to leaves, with a translocation factor below 1. Further, PAEs were readily transformed to their monoesters following uptake. Incubation of PAEs and monoalkyl phthalate esters (MPEs) in carrot cell culture showed that DnBP was hydrolyzed more rapidly than DEHP, while the monoesters were transformed more quickly than their parent precursors. Given the extensive metabolism of PAEs to monoesters in both whole plants and plant cells, metabolism intermediates such as MPEs should be considered when assessing human exposure via dietary intake of food produced from PAE-contaminated soils. PMID:26090545

  15. Quantitative Understanding of Nanoparticle Uptake in Watermelon Plants.

    PubMed

    Raliya, Ramesh; Franke, Christina; Chavalmane, Sanmathi; Nair, Remya; Reed, Nathan; Biswas, Pratim

    2016-01-01

    The use of agrochemical-nutrient fertilizers has come under scrutiny in recent years due to concerns that they damage the ecosystem and endanger public health. Nanotechnology offers many possible interventions to mitigate these risks by use of nanofertilizers, nanopesticides, and nanosensors; and concurrently increases profitability, yields, and sustainability within the agricultural industry. Aerosol based foliar delivery of nanoparticles may help to enhance nanoparticle uptake and reduce environmental impacts of chemical fertilizers conventionally applied through a soil route. The purpose of this work was to study uptake, translocation, and accumulation of various gold nanostructures, 30-80 nm, delivered by aerosol application to a watermelon plant. Cellular uptake and accumulation of gold nanoparticles were quantified by Inductively Coupled Plasma-Mass Spectroscopy (ICP-MS). Observations suggested that nanoparticles could be taken up by the plant through direct penetration and transport through the stomatal opening. Observed translocation of nanoparticles from leaf to root shows evidence that nanoparticles travel by the phloem transport mechanism. Accumulation and transport of nanoparticles depend on nanoparticle shape, application method, and nature of plant tissues. PMID:27617020

  16. Quantitative Understanding of Nanoparticle Uptake in Watermelon Plants

    PubMed Central

    Raliya, Ramesh; Franke, Christina; Chavalmane, Sanmathi; Nair, Remya; Reed, Nathan; Biswas, Pratim

    2016-01-01

    The use of agrochemical-nutrient fertilizers has come under scrutiny in recent years due to concerns that they damage the ecosystem and endanger public health. Nanotechnology offers many possible interventions to mitigate these risks by use of nanofertilizers, nanopesticides, and nanosensors; and concurrently increases profitability, yields, and sustainability within the agricultural industry. Aerosol based foliar delivery of nanoparticles may help to enhance nanoparticle uptake and reduce environmental impacts of chemical fertilizers conventionally applied through a soil route. The purpose of this work was to study uptake, translocation, and accumulation of various gold nanostructures, 30–80 nm, delivered by aerosol application to a watermelon plant. Cellular uptake and accumulation of gold nanoparticles were quantified by Inductively Coupled Plasma-Mass Spectroscopy (ICP-MS). Observations suggested that nanoparticles could be taken up by the plant through direct penetration and transport through the stomatal opening. Observed translocation of nanoparticles from leaf to root shows evidence that nanoparticles travel by the phloem transport mechanism. Accumulation and transport of nanoparticles depend on nanoparticle shape, application method, and nature of plant tissues.

  17. Quantitative Understanding of Nanoparticle Uptake in Watermelon Plants

    PubMed Central

    Raliya, Ramesh; Franke, Christina; Chavalmane, Sanmathi; Nair, Remya; Reed, Nathan; Biswas, Pratim

    2016-01-01

    The use of agrochemical-nutrient fertilizers has come under scrutiny in recent years due to concerns that they damage the ecosystem and endanger public health. Nanotechnology offers many possible interventions to mitigate these risks by use of nanofertilizers, nanopesticides, and nanosensors; and concurrently increases profitability, yields, and sustainability within the agricultural industry. Aerosol based foliar delivery of nanoparticles may help to enhance nanoparticle uptake and reduce environmental impacts of chemical fertilizers conventionally applied through a soil route. The purpose of this work was to study uptake, translocation, and accumulation of various gold nanostructures, 30–80 nm, delivered by aerosol application to a watermelon plant. Cellular uptake and accumulation of gold nanoparticles were quantified by Inductively Coupled Plasma-Mass Spectroscopy (ICP-MS). Observations suggested that nanoparticles could be taken up by the plant through direct penetration and transport through the stomatal opening. Observed translocation of nanoparticles from leaf to root shows evidence that nanoparticles travel by the phloem transport mechanism. Accumulation and transport of nanoparticles depend on nanoparticle shape, application method, and nature of plant tissues. PMID:27617020

  18. A Comparative Study of Iron Uptake Rates and Mechanisms amongst Marine and Fresh Water Cyanobacteria: Prevalence of Reductive Iron Uptake

    PubMed Central

    Lis, Hagar; Kranzler, Chana; Keren, Nir; Shaked, Yeala

    2015-01-01

    In this contribution, we address the question of iron bioavailability to cyanobacteria by measuring Fe uptake rates and probing for a reductive uptake pathway in diverse cyanobacterial species. We examined three Fe-substrates: dissolved inorganic iron (Fe') and the Fe-siderophores Ferrioxamine B (FOB) and FeAerobactin (FeAB). In order to compare across substrates and strains, we extracted uptake rate constants (kin = uptake rate/[Fe-substrate]). Fe' was the most bioavailable Fe form to cyanobacteria, with kin values higher than those of other substrates. When accounting for surface area (SA), all strains acquired Fe' at similar rates, as their kin/SA were similar. We also observed homogeneity in the uptake of FOB among strains, but with 10,000 times lower kin/SA values than Fe'. Uniformity in kin/SA suggests similarity in the mechanism of uptake and indeed, all strains were found to employ a reductive step in the uptake of Fe' and FOB. In contrast, different uptake pathways were found for FeAB along with variations in kin/SA. Our data supports the existence of a common reductive Fe uptake pathway amongst cyanobacteria, functioning alone or in addition to siderophore-mediated uptake. Cyanobacteria combining both uptake strategies benefit from increased flexibility in accessing different Fe-substrates. PMID:25768677

  19. Uptake of cyantraniliprole into tomato fruit and foliage under hydroponic conditions: application to calibration of a plant/soil uptake model.

    PubMed

    Anderson, Jeffrey J; Bookhart, S Wingard; Clark, Jonathan M; Jernberg, Kathryn M; Kingston, Coleen K; Snyder, Nathan; Wallick, Kevin; Watson, Lawrence J

    2013-09-25

    Measured uptake of cyantraniliprole (3-bromo-1-(3-chloro-2-pyridinyl)-N-[4-cyano-2-methyl-6-[(methylamino)carbonyl]phenyl]-1H-pyrazole-5-carboxamide) into tomatoes following hydroponic exposure allowed calibration of a novel soil uptake model. The total mass of plant parts in treated plants was derived from the weights of successively harvested control plants (no cyantraniliprole provided) over 18 days following the first sampling of ripe tomatoes. Transpired water measured during plant growth was coupled with the calculated increase in plant mass to determine a transpiration coefficient constant (L/kg plant fresh weight) for use in the model. Cyantraniliprole concentrations in mature fruit, fresh foliage, and plant uptake solutions were used as the basis for a nonlinear least-squares optimization that consistently resolved to values that were empirically valid compared to metabolism studies in whole plants. This calibrated reference model adequately described uptake from soil pore water into plant fruit, and served as the basis for describing residues in fruit following commercial greenhouse growing conditions.

  20. Uptake of cyantraniliprole into tomato fruit and foliage under hydroponic conditions: application to calibration of a plant/soil uptake model.

    PubMed

    Anderson, Jeffrey J; Bookhart, S Wingard; Clark, Jonathan M; Jernberg, Kathryn M; Kingston, Coleen K; Snyder, Nathan; Wallick, Kevin; Watson, Lawrence J

    2013-09-25

    Measured uptake of cyantraniliprole (3-bromo-1-(3-chloro-2-pyridinyl)-N-[4-cyano-2-methyl-6-[(methylamino)carbonyl]phenyl]-1H-pyrazole-5-carboxamide) into tomatoes following hydroponic exposure allowed calibration of a novel soil uptake model. The total mass of plant parts in treated plants was derived from the weights of successively harvested control plants (no cyantraniliprole provided) over 18 days following the first sampling of ripe tomatoes. Transpired water measured during plant growth was coupled with the calculated increase in plant mass to determine a transpiration coefficient constant (L/kg plant fresh weight) for use in the model. Cyantraniliprole concentrations in mature fruit, fresh foliage, and plant uptake solutions were used as the basis for a nonlinear least-squares optimization that consistently resolved to values that were empirically valid compared to metabolism studies in whole plants. This calibrated reference model adequately described uptake from soil pore water into plant fruit, and served as the basis for describing residues in fruit following commercial greenhouse growing conditions. PMID:24000775

  1. Interactions between uptake of amino acids and inorganic nitrogen in wheat plants

    NASA Astrophysics Data System (ADS)

    Gioseffi, E.; de Neergaard, A.; Schjoerring, J. K.

    2011-11-01

    Soil-borne amino acids may constitute a nitrogen (N) source for plants in various terrestrial ecosystems but their importance for total N nutrition is unclear, particularly in nutrient-rich arable soils. One reason for this uncertainty is lack of information on how the absorption of amino acids by plant roots is affected by the simultaneous presence of inorganic N forms. The objective of the present study was to study absorption of glycine (Gly) and glutamine (Gln) by wheat roots and their interactions with nitrate (NO3-) and (NH4+) during uptake. The underlying hypothesis was that amino acids, when present in nutrient solution together with inorganic N, may lead to down-regulation of the inorganic N uptake. Amino acids were enriched with double-labelled 15N and 13C, while NO3- and NH4+ acquisition was determined by their rate of removal from the nutrient solution surrounding the roots. The uptake rates of NO3- and NH4+ did not differ from each other and were about twice as high as the uptake rate of organic N when the different N forms were supplied separately in concentrations of 2 mM. Nevertheless, replacement of 50 % of the inorganic N with organic N was able to restore the N uptake to the same level as that in the presence of only inorganic N. Co-provision of NO3- did not affect glycine uptake, while the presence of glycine down-regulated NO3- uptake. The ratio between 13C and 15N were lower in shoots than in roots and also lower than the theoretical values, reflecting higher C losses via respiratory processes compared to N losses. It is concluded that organic N can constitute a significant N-source for wheat plants and that there is an interaction between the uptake of inorganic and organic nitrogen.

  2. [Effects of plant density and nitrogen level on nitrogen uptake and utilization of winter wheat].

    PubMed

    Zhang, Juan; Wu, Tong-hua; Dai, Xing-long; Wang, Xi-zhi; Li, Hong-mei; Jiang, Ming-yang; He, Ming-rong

    2015-06-01

    A two-year (2011-2012 and 2012-2013) field experiment was conducted on one winter wheat cultivar supplied with two levels, of nitrogen (180 and 240 kg N · hm(-2)) under three plant densities (135 x 10(4), 270 x 10(4), and 405 x 10(4) plants · hm(-2)) . The 15N-labeled urea was injected into 20, 60 and 100 cm soil depths, respectively, aiming to investigate the effect of nitrogen and plant density and their interaction on the N uptake, utilization and nitrate nitrogen contents at different soil depths. The results showed that increasing the plant density from 135 x 10(4) to 405 x 10(4) plants · hm(-2) significantly increased the 15N uptake at depths of 20, 60 and 100 cm averagely by 1.86, 2.28 and 2.51 kg · hm(-2), respectively, and increased the above ground N uptake (AGN) , N uptake efficiency (UPE) averagely by 12.6% and 12.6%, respectively, but decreased the N utilization efficiency (UTE) by 5.4%. Compared to the N input of 240 kg N · hm(-2) the 180 kg N · hm(-2) significantly reduced the 15N uptake at depths of 20 and 60 cm averagely by 4. 11 and 1.21 kg · hm(-2), respectively, and significantly increased the 15N uptake at depths of 100 cm averagely by 1.02 kg · hm(-2). Reducing the N input decreased the AGN averagely by 13.5%, but significantly increased the UPE and UTE by 9.4% and 12.2%, respectively. Equivalent grain yield was observed among N input of 180 kg N · hm(-2) with plant density of 405 x 10(4) plants · hm(-2) and N input of 240 kg N · hm(-2) with plant densities of 270 x 10(4) and 405 x 10(4) plants · hm(-2). Increasing the plant density or reducing the N input could encourage the N uptake at deep soil profile and increased UPE and UTE by 13.4% and 11.9%, respectively. Meanwhile, both the nitrate nitrogen contents in 0-200 cm soil layers at maturity and the ratio of the nitrate nitrogen in 100-200 cm soil layers to that in -200 cm were significantly decreased. Therefore, properly decreasing the N input with increasing the plant density

  3. Plant traits related to nitrogen uptake influence plant-microbe competition.

    PubMed

    Moreau, Delphine; Pivato, Barbara; Bru, David; Busset, Hugues; Deau, Florence; Faivre, Céline; Matejicek, Annick; Strbik, Florence; Philippot, Laurent; Mougel, Christophe

    2015-08-01

    Plant species are important drivers of soil microbial communities. However, how plant functional traits are shaping these communities has received less attention though linking plant and microbial traits is crucial for better understanding plant-microbe interactions. Our objective was to determine how plant-microbe interactions were affected by plant traits. Specifically we analyzed how interactions between plant species and microbes involved in nitrogen cycling were affected by plant traits related to 'nitrogen nutrition in interaction with soil nitrogen availability. Eleven plant species, selected along an oligotrophic-nitrophilic gradient, were grown individually in a nitrogen-poor soil with two levels of nitrate availability. Plant traits for both carbon and nitrogen nutrition were measured and the genetic structure and abundance of rhizosphere. microbial communities, in particular the ammonia oxidizer and nitrate reducer guilds, were analyzed. The structure of the bacterial community in the rhizosphere differed significantly between plant species and these differences depended on nitrogen availability. The results suggest that the rate of nitrogen uptake per unit of root biomass and per day is a key plant trait, explaining why the effect of nitrogen availability on the structure of the bacterial community depends on the plant species. We also showed that the abundance of nitrate reducing bacteria always decreased with increasing nitrogen uptake per unit of root biomass per day, indicating that there was competition for nitrate between plants and nitrate reducing bacteria. This study demonstrates that nitrate-reducing microorganisms may be adversely affected by plants with a high nitrogen uptake rate. Our work puts forward the role of traits related to nitrogen in plant-microbe interactions, whereas carbon is commonly considered as the main driver. It also suggests that plant traits related to ecophysiological processes, such as nitrogen uptake rates, are more

  4. Uptake of perfluorinated compounds by plants grown in nutrient solution.

    PubMed

    García-Valcárcel, A I; Molero, E; Escorial, M C; Chueca, M C; Tadeo, J L

    2014-02-15

    The uptake rates of three perfluorinated carboxylates and three perfluorinated sufonates by a grass (B diandrus) grown in nutrient solution at two different perfluorinated compounds (PFCs) concentrations were assessed. Grass can be ingested by grazing animals causing the PFCs to enter the food chain, which is a pathway of human exposure to these compounds. A rapid and miniaturized method was developed to determine PFCs in plants, based on a matrix solid-phase dispersion (MSPD) extraction procedure followed by quantitation by HPLC-MS/MS with an MQL in the range from 1 to 9 ng/g. An increase of PFCs levels in plant was observed along the exposure time. Differences in uptake for studied perfluorinated carboxylates were found, showing a decrease with carbon chain length (from 3027 to 1,167 ng/g at the end of assay), whereas no significant differences in absorption were obtained between perfluorinated sulfonates (about 1,700 ng/g). Initially, higher PFC transfer factors (ratio between concentration in plant and concentration in initial nutrient solution) were obtained for plants growing in the nutrient solution at the highest PFC concentration, but these factors became similar with time to plants exposed to the lowest concentration.

  5. Uptake of perfluorinated compounds by plants grown in nutrient solution.

    PubMed

    García-Valcárcel, A I; Molero, E; Escorial, M C; Chueca, M C; Tadeo, J L

    2014-02-15

    The uptake rates of three perfluorinated carboxylates and three perfluorinated sufonates by a grass (B diandrus) grown in nutrient solution at two different perfluorinated compounds (PFCs) concentrations were assessed. Grass can be ingested by grazing animals causing the PFCs to enter the food chain, which is a pathway of human exposure to these compounds. A rapid and miniaturized method was developed to determine PFCs in plants, based on a matrix solid-phase dispersion (MSPD) extraction procedure followed by quantitation by HPLC-MS/MS with an MQL in the range from 1 to 9 ng/g. An increase of PFCs levels in plant was observed along the exposure time. Differences in uptake for studied perfluorinated carboxylates were found, showing a decrease with carbon chain length (from 3027 to 1,167 ng/g at the end of assay), whereas no significant differences in absorption were obtained between perfluorinated sulfonates (about 1,700 ng/g). Initially, higher PFC transfer factors (ratio between concentration in plant and concentration in initial nutrient solution) were obtained for plants growing in the nutrient solution at the highest PFC concentration, but these factors became similar with time to plants exposed to the lowest concentration. PMID:24291554

  6. Uptake of Pharmaceuticals Influences Plant Development and Affects Nutrient and Hormone Homeostases.

    PubMed

    Carter, Laura J; Williams, Mike; Böttcher, Christine; Kookana, Rai S

    2015-10-20

    The detection of a range of active pharmaceutical ingredients (APIs) in the soil environment has led to a number of publications demonstrating uptake by crops, however very few studies have explored the potential for impacts on plant development as a result of API uptake. This study investigated the effect of carbamazepine and verapamil (0.005-10 mg/kg) on a range of plant responses in zucchini (Cucurbita pepo). Uptake increased in a dose-dependent manner, with maximum leaf concentrations of 821.9 and 2.2 mg/kg for carbamazepine and verapamil, respectively. Increased carbamazepine uptake by zucchini resulted in a decrease in above (<60%) and below (<30%) ground biomass compared to the controls (p < 0.05). At soil concentrations >4 mg/kg the mature leaves suffered from burnt edges and white spots as well as a reduction in photosynthetic pigments but no such effects were seen for verapamil. For both APIs, further investigations revealed significant differences in the concentrations of selected plant hormones (auxins, cytokinins, abscisic acid and jasmonates), and in the nutrient composition of the leaves in comparison to the controls (p < 0.05). This is some of the first research to demonstrate that the exposure of plants to APIs is likely to cause impacts on plant development with unknown implications.

  7. Uptake of Pharmaceuticals Influences Plant Development and Affects Nutrient and Hormone Homeostases.

    PubMed

    Carter, Laura J; Williams, Mike; Böttcher, Christine; Kookana, Rai S

    2015-10-20

    The detection of a range of active pharmaceutical ingredients (APIs) in the soil environment has led to a number of publications demonstrating uptake by crops, however very few studies have explored the potential for impacts on plant development as a result of API uptake. This study investigated the effect of carbamazepine and verapamil (0.005-10 mg/kg) on a range of plant responses in zucchini (Cucurbita pepo). Uptake increased in a dose-dependent manner, with maximum leaf concentrations of 821.9 and 2.2 mg/kg for carbamazepine and verapamil, respectively. Increased carbamazepine uptake by zucchini resulted in a decrease in above (<60%) and below (<30%) ground biomass compared to the controls (p < 0.05). At soil concentrations >4 mg/kg the mature leaves suffered from burnt edges and white spots as well as a reduction in photosynthetic pigments but no such effects were seen for verapamil. For both APIs, further investigations revealed significant differences in the concentrations of selected plant hormones (auxins, cytokinins, abscisic acid and jasmonates), and in the nutrient composition of the leaves in comparison to the controls (p < 0.05). This is some of the first research to demonstrate that the exposure of plants to APIs is likely to cause impacts on plant development with unknown implications. PMID:26418514

  8. Evaluating stomatal ozone fluxes in WRF-Chem: Comparing ozone uptake in Mediterranean ecosystems

    NASA Astrophysics Data System (ADS)

    Rydsaa, J. H.; Stordal, F.; Gerosa, G.; Finco, A.; Hodnebrog, Ø.

    2016-10-01

    The development of modelling tools for estimating stomatal uptake of surface ozone in vegetation is important for the assessment of potential damage induced due to both current and future near surface ozone concentrations. In this study, we investigate the skill in estimating ozone uptake in plants by the Weather Research and Forecasting model coupled with chemistry (WRF-Chem) V3.6.1, with the Wesely dry deposition scheme. To validate the stomatal uptake of ozone, the model simulations were compared with field measurements of three types of Mediterranean vegetation, over seven different periods representing various meteorological conditions. Some systematic biases in modelled ozone fluxes are revealed; the lack of an explicit and time varying dependency on plants' water availability results in overestimated daytime ozone stomatal fluxes particularly in dry periods. The optimal temperature in the temperature response function is likely too low for the woody species tested here. Also, too low nighttime stomatal conductance leads to underestimation of ozone uptake during night. We demonstrate that modelled stomatal ozone flux is improved by accounting for vapor pressure deficit in the ambient air. Based on the results of the overall comparison to measured fluxes, we propose that additional improvements to the stomatal conductance parameterization should be implemented before applying the modelling system for estimating ozone doses and potential damage to vegetation.

  9. Uptake of human pharmaceuticals by plants grown under hydroponic conditions.

    PubMed

    Herklotz, Patrick A; Gurung, Prakash; Vanden Heuvel, Brian; Kinney, Chad A

    2010-03-01

    Cabbage (Brassica rapa var. pekinensis) and Wisconsin Fast Plants (Brassica rapa) were chosen for a proof of concept study to determine the potential uptake and accumulation of human pharmaceuticals by plants. These plants were grown hydroponically under high-pressure sodium lamps in one of two groups including a control and test group exposed to pharmaceuticals. The control plants were irrigated with a recirculating Hoagland's nutrient solution while the test plants were irrigated with a Hoagland's nutrient solution fortified with the pharmaceuticals carbamazepine, salbutamol, sulfamethoxazole, and trimethoprim at 232.5 microg L(-1). When plants reached maturity, nine entire plants of each species were separated into components such as roots, leaves, stems, and seedpods where applicable. An analytical method for quantifying pharmaceuticals and personal care products was developed using pressurized liquid extraction and liquid chromatography electrospray ionization mass spectrometry (LC/ESI/MS) in positive and negative ion modes using single ion monitoring. The method detection limits ranged from 3.13 ng g(-1) to 29.78 ng g(-1) with recoveries ranging from 66.83% to 113.62% from plant matrices. All four of the pharmaceuticals were detected in the roots and leaves of the cabbage. The maximum wet weight concentrations of the pharmaceuticals were detected in the root structure of the cabbage plants at 98.87 ng g(-1) carbamazepine, 114.72 ng g(-1) salbutamol, 138.26 ng g(-1) sulfamethoxazole, and 91.33 ng g(-1) trimethoprim. Carbamazepine and salbutamol were detected in the seedpods of the Wisconsin Fast Plants while all four of the pharmaceuticals were detected in the leaf/stem/root of the Wisconsin Fast Plants. Phloroglucinol staining of root cross-sections was used to verify the existence of an intact endodermis, suggesting that pharmaceuticals found in the leaf and seedpods of the plants were transported symplastically. PMID:20096438

  10. Uptake of human pharmaceuticals by plants grown under hydroponic conditions.

    PubMed

    Herklotz, Patrick A; Gurung, Prakash; Vanden Heuvel, Brian; Kinney, Chad A

    2010-03-01

    Cabbage (Brassica rapa var. pekinensis) and Wisconsin Fast Plants (Brassica rapa) were chosen for a proof of concept study to determine the potential uptake and accumulation of human pharmaceuticals by plants. These plants were grown hydroponically under high-pressure sodium lamps in one of two groups including a control and test group exposed to pharmaceuticals. The control plants were irrigated with a recirculating Hoagland's nutrient solution while the test plants were irrigated with a Hoagland's nutrient solution fortified with the pharmaceuticals carbamazepine, salbutamol, sulfamethoxazole, and trimethoprim at 232.5 microg L(-1). When plants reached maturity, nine entire plants of each species were separated into components such as roots, leaves, stems, and seedpods where applicable. An analytical method for quantifying pharmaceuticals and personal care products was developed using pressurized liquid extraction and liquid chromatography electrospray ionization mass spectrometry (LC/ESI/MS) in positive and negative ion modes using single ion monitoring. The method detection limits ranged from 3.13 ng g(-1) to 29.78 ng g(-1) with recoveries ranging from 66.83% to 113.62% from plant matrices. All four of the pharmaceuticals were detected in the roots and leaves of the cabbage. The maximum wet weight concentrations of the pharmaceuticals were detected in the root structure of the cabbage plants at 98.87 ng g(-1) carbamazepine, 114.72 ng g(-1) salbutamol, 138.26 ng g(-1) sulfamethoxazole, and 91.33 ng g(-1) trimethoprim. Carbamazepine and salbutamol were detected in the seedpods of the Wisconsin Fast Plants while all four of the pharmaceuticals were detected in the leaf/stem/root of the Wisconsin Fast Plants. Phloroglucinol staining of root cross-sections was used to verify the existence of an intact endodermis, suggesting that pharmaceuticals found in the leaf and seedpods of the plants were transported symplastically.

  11. Effect of Plant Uptake on Perchlorate Isotopic Composition

    NASA Astrophysics Data System (ADS)

    Estrada, N. L.; Jackson, W. A.; Bohlke, J. K.; Sturchio, N. C.; Gu, B.; Rao, B.; Hatzinger, P. B.; Harvey, G.; Burkey, K.; McGrath, M. T.; Sevanthi, R.

    2013-12-01

    The occurrence of perchlorate (ClO4-) in the environment is attributed to both synthetic and natural sources. Unlike anthropogenic ClO4-, natural ClO4- exhibits a wide range in isotopic compositions, suggesting that natural ClO4- is formed through more than one pathway and/or undergoes post-depositional isotopic fractionation processes. One of these processes could be plant uptake and metabolism. Plants are known to reversibly accumulate ClO4-. However, there is little information available regarding the ability for plants to isotopically fractionate ClO4-. Plants could alter ClO4-isotopic composition either by mass dependent fractionation via transport carriers in the root, diffusion limitations through the root, translocation within the plant, reduction of ClO4- by plant enzymes, or non-specific exchange of oxygen in ClO4- catalyzed by plant compounds/processes. We examined the potential for plants to alter the isotopic composition of ClO4- (δ37Cl, δ18O, and Δ17O) in both hydroponic and field scale experiments. Hydroponically grown snap bean plants were exposed to variable ClO4-concentrations (2mg/L and 10mg/L) in solutions prepared from ClO4- with both normal and anomalous O isotopic abundances. At maturity, we evaluated the uptake of ClO4-relative to other anions and the isotopic compositions of ClO4- in both plants and growth solutions. Additional experiments involved field scale exposures of snap beans to irrigation water containing low levels (< 10 ug/L) of ClO4-. The majority of the initial mass of ClO4- for both the low and high exposure hydroponic treatments was recovered in the growth solutions (20-40%) or plant compartments (40-60%), while some mass was not recovered (~20%). ClO4- isotopic compositions were essentially identical between recovered ClO4- in the plant tissues and hydroponic solutions. Anion ratios indicate that ClO4-was accumulated similarly to NO3- but preferentially to Cl- (~4X). In field experiments, the isotopic composition of ClO4

  12. Effect of nitrate on uptake of pertechnetate by tomato plants

    SciTech Connect

    Krijger, G.C.; Kolloeffel, C.; Wolterbeek, H.T.

    2000-06-01

    Nitrate has been shown to affect the acquisition of the nuclear waste product technetium (Tc) by plants. The mechanism responsible for this phenomenon is unknown. The uptake of [{sup 99m}Tc]TcO{sub 4}{sup {minus}},[{sup 35}S] SO{sub 4}{sup 2{minus}} and H{sub 2}[{sup 32P}]PO{sub 4}{sup {minus}} was studied in tomato plants (Lycopersicon esculentum Mill., cv. Tiny Tim) with different growth rates due to culture at 0.5, 4.0, or 30 mM NO{sub 3}{sup {minus}}. In experiments lasting 24 h, net TcO{sub 4}{sup {minus}} uptake decreased at higher NO{sub 3}{sup {minus}} supplies. The inhibitory effect of NO{sub 3}{sup {minus}} on TcO{sub 4}{sup {minus}} uptake also was shown in TcO{sub 4}{sup {minus}} influx experiments (K{sub i} = 3.3 mM), although about 30% of the TcO{sub 4}{sup {minus}} influx is suggested to be insensitive to NO{sub 3}{sup {minus}}. In contrast, H{sub 2}PO{sub 4}{sup {minus}} (30 mM) did not inhibit TcO{sub 4}{sup {minus}} influx, whereas SO{sub 4}{sup 2{minus}} (30 mM) tended to increase TcO{sub 4}{sup {minus}} influx, probably due to the ionic strength of the uptake solution. Significant effects of the NO{sub 3}{sup {minus}} supply on Tc efflux were not found. Overall, this leads to the conclusion that TcO{sub 4}{sup {minus}} and NO{sub 3}{sup {minus}} share at least one transporter.

  13. Grass plants bind, retain, uptake and transport infectious prions

    PubMed Central

    Pritzkow, Sandra; Morales, Rodrigo; Moda, Fabio; Khan, Uffaf; Telling, Glenn C.; Hoover, Edward; Soto, Claudio

    2015-01-01

    Prions are the protein-based infectious agents responsible for prion diseases. Environmental prion contamination has been implicated in disease transmission. Here we analyzed the binding and retention of infectious prion protein (PrPSc) to plants. Small quantities of PrPSc contained in diluted brain homogenate or in excretory materials (urine and feces) can bind to wheat grass roots and leaves. Wild type hamsters were efficiently infected by ingestion of prion-contaminated plants. The prion-plant interaction occurs with prions from diverse origins, including chronic wasting disease. Furthermore, leaves contaminated by spraying with a prion-containing preparation retained PrPSc for several weeks in the living plant. Finally, plants can uptake prions from contaminated soil and transport them to aerial parts of the plant (stem and leaves). These findings demonstrate that plants can efficiently bind infectious prions and act as carriers of infectivity, suggesting a possible role of environmental prion contamination in the horizontal transmission of the disease. PMID:25981035

  14. Grass plants bind, retain, uptake, and transport infectious prions.

    PubMed

    Pritzkow, Sandra; Morales, Rodrigo; Moda, Fabio; Khan, Uffaf; Telling, Glenn C; Hoover, Edward; Soto, Claudio

    2015-05-26

    Prions are the protein-based infectious agents responsible for prion diseases. Environmental prion contamination has been implicated in disease transmission. Here, we analyzed the binding and retention of infectious prion protein (PrP(Sc)) to plants. Small quantities of PrP(Sc) contained in diluted brain homogenate or in excretory materials (urine and feces) can bind to wheat grass roots and leaves. Wild-type hamsters were efficiently infected by ingestion of prion-contaminated plants. The prion-plant interaction occurs with prions from diverse origins, including chronic wasting disease. Furthermore, leaves contaminated by spraying with a prion-containing preparation retained PrP(Sc) for several weeks in the living plant. Finally, plants can uptake prions from contaminated soil and transport them to aerial parts of the plant (stem and leaves). These findings demonstrate that plants can efficiently bind infectious prions and act as carriers of infectivity, suggesting a possible role of environmental prion contamination in the horizontal transmission of the disease.

  15. Foliar water uptake: a common water acquisition strategy for plants of the redwood forest.

    PubMed

    Limm, Emily Burns; Simonin, Kevin A; Bothman, Aron G; Dawson, Todd E

    2009-09-01

    Evaluations of plant water use in ecosystems around the world reveal a shared capacity by many different species to absorb rain, dew, or fog water directly into their leaves or plant crowns. This mode of water uptake provides an important water subsidy that relieves foliar water stress. Our study provides the first comparative evaluation of foliar uptake capacity among the dominant plant taxa from the coast redwood ecosystem of California where crown-wetting events by summertime fog frequently occur during an otherwise drought-prone season. Previous research demonstrated that the dominant overstory tree species, Sequoia sempervirens, takes up fog water by both its roots (via drip from the crown to the soil) and directly through its leaf surfaces. The present study adds to these early findings and shows that 80% of the dominant species from the redwood forest exhibit this foliar uptake water acquisition strategy. The plants studied include canopy trees, understory ferns, and shrubs. Our results also show that foliar uptake provides direct hydration to leaves, increasing leaf water content by 2-11%. In addition, 60% of redwood forest species investigated demonstrate nocturnal stomatal conductance to water vapor. Such findings indicate that even species unable to absorb water directly into their foliage may still receive indirect benefits from nocturnal leaf wetting through suppressed transpiration. For these species, leaf-wetting events enhance the efficacy of nighttime re-equilibration with available soil water and therefore also increase pre-dawn leaf water potentials. PMID:19585154

  16. Foliar water uptake: a common water acquisition strategy for plants of the redwood forest.

    PubMed

    Limm, Emily Burns; Simonin, Kevin A; Bothman, Aron G; Dawson, Todd E

    2009-09-01

    Evaluations of plant water use in ecosystems around the world reveal a shared capacity by many different species to absorb rain, dew, or fog water directly into their leaves or plant crowns. This mode of water uptake provides an important water subsidy that relieves foliar water stress. Our study provides the first comparative evaluation of foliar uptake capacity among the dominant plant taxa from the coast redwood ecosystem of California where crown-wetting events by summertime fog frequently occur during an otherwise drought-prone season. Previous research demonstrated that the dominant overstory tree species, Sequoia sempervirens, takes up fog water by both its roots (via drip from the crown to the soil) and directly through its leaf surfaces. The present study adds to these early findings and shows that 80% of the dominant species from the redwood forest exhibit this foliar uptake water acquisition strategy. The plants studied include canopy trees, understory ferns, and shrubs. Our results also show that foliar uptake provides direct hydration to leaves, increasing leaf water content by 2-11%. In addition, 60% of redwood forest species investigated demonstrate nocturnal stomatal conductance to water vapor. Such findings indicate that even species unable to absorb water directly into their foliage may still receive indirect benefits from nocturnal leaf wetting through suppressed transpiration. For these species, leaf-wetting events enhance the efficacy of nighttime re-equilibration with available soil water and therefore also increase pre-dawn leaf water potentials.

  17. Factors affecting the uptake of 14C-labeled organic chemicals by plants from soil

    SciTech Connect

    Topp, E.; Scheunert, I.; Attar, A.; Korte, F.

    1986-04-01

    The uptake of /sup 14/C from various /sup 14/C-labeled organic chemicals from different chemical classes by barley and cress seedlings from soil was studied for 7 days in a closed aerated laboratory apparatus. Uptake by roots and by leaves via the air was determined separately. Although comparative long-term outdoor studies showed that an equilibrium is not reached within a short time period, plant concentration factors after 7 days could be correlated to some physicochemical and structural substance properties. Barley root concentration factors due to root uptake, expressed as concentration in roots divided by concentration in soil, gave a fairly good negative correlation to adsorption coefficients based on soil organic carbon. Barley root concentration factors, expressed as concentration in roots divided by concentration in soil liquid, gave a positive correlation to the n-octanol/water partition coefficients. Uptake of chemicals by barley leaves via air was strongly positively correlated to volatilization of chemicals from soil. Both root and foliar uptake by barley could be correlated well to the molecular weight of 14 chemicals. Uptake of chemicals by cress differed from that by barley, and correlations to physicochemical substance properties mostly were poor.

  18. In vitro RNA uptake studies in plant mitochondria.

    PubMed

    Kubiszewski-Jakubiak, Szymon; Megel, Cyrille; Ubrig, Elodie; Salinas, Thalia; Duchêne, Anne-Marie; Maréchal-Drouard, Laurence

    2015-01-01

    During evolution, most of the ancestral genes from the endosymbiotic α-proteobacteria at the origin of mitochondria have been either lost or transferred to the nuclear genome. To allow the comeback of proteins and RNAs [in particular transfer RNA (tRNAs)] into the organelle, macromolecule import systems were universally established. While protein import processes have been studied into details, much less is known about tRNA mitochondrial import. In plants, part of the knowledge on the tRNA import process into mitochondria has been acquired thanks to in vitro import assays. Furthermore, the development of in vitro RNA import strategies allowed the study of plant mitochondrial gene expression. The purpose of this chapter is to provide detailed protocols to perform in vitro RNA uptake into potato (Solanum tuberosum) or Arabidopsis (Arabidopsis thaliana) mitochondria as well as approaches to analyze them.

  19. Sulfamethazine uptake by plants from manure-amended soil.

    PubMed

    Dolliver, Holly; Kumar, Kuldip; Gupta, Satish

    2007-01-01

    Animal manure is applied to agricultural land as a means to provide crop nutrients. However, animal manure often contains antibiotics as a result of extensive therapeutic and subtherapeutic use in livestock production. The objective of this study was to evaluate plant uptake of a sulfonamide-class antibiotic, sulfamethazine, in corn (Zea mays L.), lettuce (Lactuca sativa L.), and potato (Solanum tuberosum L.) grown in a manure-amended soil. The treatments were 0, 50, and 100 microg sulfamethazine mL(-1) manure applied at a rate of 56 000 L ha(-1). Results from the 45-d greenhouse experiment showed that sulfamethazine was taken up by all three crops, with concentrations in plant tissue ranging from 0.1 to 1.2 mg kg(-1) dry weight. Sulfamethazine concentrations in plant tissue increased with corresponding increase of sulfamethazine in manure. Highest plant tissue concentrations were found in corn and lettuce, followed by potato. Total accumulation of sulfamethazine in plant tissue after 45 d of growth was less than 0.1% of the amount applied to soil in manure. These results raise potential human health concerns of consuming low levels of antibiotics from produce grown on manure-amended soils.

  20. [Study on the nitrogen and phosphorus uptake ability of four plants cultivated on floating-bed].

    PubMed

    Wu, Jian-Qiang; Wang, Min; Wu, Jian; Jiang, Yue; Sun, Cong-Jun; Cao, Yong

    2011-04-01

    Plant floating-bed tested engineering was constructed for eutrophication control in Dian-shan Lake, the characteristics and nutrient uptake abilities of Canna indica, Iris pseudacorus, Thalia dealbata and Lythrum salicaria were compared. It shows that using upper and lower nylon nets to fix the plants on the floating-bed is beneficial for them to grow and reproduce rapidly. Survival rates of Canna indica, lris pseudacorus, Thalia dealbata and Lythrum salicaria are 83.33%, 83.33%, 76.67% and 53.33% respectively. Ramets of Canna indica and Thalia dealbata are 64 and 78 respectively in November, and the biomass (fresh weight) of these two plants are 32.0 and 38.6 kg per individual plant. Nitrogen (N) and phosphorus (P) content in stems/leaves of Canna indica and Thalia dealbata are greater than those in roots. The ratio between stems/leaves and roots of N, P content in Canna indica are 1.40 and 1.21 respectively, while 1.59 and 1.08 in Thalia dealbata. The difference of cumulative N, P content in plants is mostly on account of different plant biomass. N uptake ability of Thalia dealbata is the highest, which is 457.11 g per square; Canna indica has the highest P uptake ability, which is 41.29 g per square. N, P uptake ability of stems/leaves in Canna indica are 2.17 and 1.86 times higher than that of roots, while 1.73 and 1.17 times higher respectively in Thalia dealbata. Thus, Canna indica and Thalia dealbata are recommended as the floating-bed plants to control the eutrophication in Dian-shan Lake. PMID:21717738

  1. [Study on the nitrogen and phosphorus uptake ability of four plants cultivated on floating-bed].

    PubMed

    Wu, Jian-Qiang; Wang, Min; Wu, Jian; Jiang, Yue; Sun, Cong-Jun; Cao, Yong

    2011-04-01

    Plant floating-bed tested engineering was constructed for eutrophication control in Dian-shan Lake, the characteristics and nutrient uptake abilities of Canna indica, Iris pseudacorus, Thalia dealbata and Lythrum salicaria were compared. It shows that using upper and lower nylon nets to fix the plants on the floating-bed is beneficial for them to grow and reproduce rapidly. Survival rates of Canna indica, lris pseudacorus, Thalia dealbata and Lythrum salicaria are 83.33%, 83.33%, 76.67% and 53.33% respectively. Ramets of Canna indica and Thalia dealbata are 64 and 78 respectively in November, and the biomass (fresh weight) of these two plants are 32.0 and 38.6 kg per individual plant. Nitrogen (N) and phosphorus (P) content in stems/leaves of Canna indica and Thalia dealbata are greater than those in roots. The ratio between stems/leaves and roots of N, P content in Canna indica are 1.40 and 1.21 respectively, while 1.59 and 1.08 in Thalia dealbata. The difference of cumulative N, P content in plants is mostly on account of different plant biomass. N uptake ability of Thalia dealbata is the highest, which is 457.11 g per square; Canna indica has the highest P uptake ability, which is 41.29 g per square. N, P uptake ability of stems/leaves in Canna indica are 2.17 and 1.86 times higher than that of roots, while 1.73 and 1.17 times higher respectively in Thalia dealbata. Thus, Canna indica and Thalia dealbata are recommended as the floating-bed plants to control the eutrophication in Dian-shan Lake.

  2. How do microorganisms influence trace element uptake by plants? Screening in an agar model rhizosphere.

    NASA Astrophysics Data System (ADS)

    Marchetti, M.; Robinson, B. H.; Evangelou, M. W. H.; Vachey, A.; Schwitzguebel, J. P.; Bernier-Latmani, R.; Schulin, R.

    2009-04-01

    sterile, transparent plastic boxes, whose lid was equipped with a filter allowing gas exchanges without contamination by external microorganisms. The seed surface was sterilised and the plants grew one week in agar before their rhizosphere was inoculated with LB broth containing a pure bacterial strain or agar plugs colonized by fungal hyphae. We tested 14 strains, with 5 replicates per treatment and a control where the system was inoculated with sterile LB broth. The plants grew for 2 weeks in a climate chamber and their shoots were analysed for their TEs by ICP-OES. Samples of agar and roots were collected to confirm microbial colonization of the rhizosphere, respectively sterile conditions in the control treatments. Concerning the method development, the plants grew without visible toxicity in all the boxes, and the analysis of root and agar samples indicated that the controls were sterile and the strains inoculated were growing along the roots. More than 90% of the TE and nutrients added to the system were in the liquid fraction of the agar medium, thus available for root uptake. The screening showed that the microorganisms in general decreased TE uptake by wheat and sunflower, although some of them had an opposite effect on the plants. However, with the same plant species, the microorganisms had a consistent effect on all TE tested, i.e. a given single strain caused the same effect (increase or decrease of TE uptake) on all TE tested. In sunflower, 3 microorganisms (Paenibacillus polymyxa, Pythium ultimum and Rhizoctonia solani) decreased Cu and Zn uptake by 50% compared to the control treatment. These three species are common soil microorganisms. All three are known to exude auxin, a phytohormone. This hormone can modify root morphology and physiology and thus may affect TE uptake by plants. R. solani and P. ultimum are root pathogens. Their effect was opposite to what we expected. If roots are damaged, TE should have flooded into the plant and accumulate in the

  3. The role of plant uptake on the removal of organic matter and nutrients in subsurface flow constructed wetlands: a simulation study.

    PubMed

    Langergraber, G

    2005-01-01

    Plants in constructed wetlands have several functions related to the treatment processes. It is generally agreed that nutrient uptake is a minor factor in constructed wetlands treating wastewater compared to the loadings applied. For low loaded systems plant uptake can contribute a significant amount to nutrient removal. The contribution of plant uptake is simulated for different qualities of water to be treated using the multi-component reactive transport module CW2D. CW2D is able to describe the biochemical elimination and transformation processes for organic matter, nitrogen and phosphorus in subsurface flow constructed wetlands. The model for plant uptake implemented describes nutrient uptake coupled to water uptake. Literature values are used to calculate potential water and nutrient uptake rates. For a constructed wetland treating municipal wastewater a potential nutrient uptake of about 1.9% of the influent nitrogen and phosphorus load can be expected. For lower loaded systems the potential uptake is significantly higher, e.g. 46% of the nitrogen load for treatment of greywater. The potential uptake rates could only be simulated for high loaded systems i.e. constructed wetlands treating wastewater. For low loaded systems the nutrient concentrations in the liquid phase were too low to simulate the potential uptake rates using the implemented model for plant uptake.

  4. Novel Therapeutics for Diabetes: Uptake, Usage Trends, and Comparative Effectiveness.

    PubMed

    Ahuja, Vishal; Chou, Chia-Hung

    2016-06-01

    The number of available therapies for treating type 2 diabetes has grown considerably in recent years. This growth has been fueled by availability of newer medications, whose benefits and risks have not been fully established. In this study, we review and synthesize the existing literature on the uptake, efficacy, safety, and cost-effectiveness of novel antidiabetic agents. Specifically, we focus on three drug classes that were introduced in the market recently: thiazolidinediones (TZDs), dipeptidyl peptidase-4 (DPP-4) inhibitors, and glucagon-like peptide-1 (GLP-1) receptor agonists. Not surprisingly, we find that the usage trends reflect the efficacy and safety profile of these novel drugs. The use of TZDs increased initially but decreased after a black-box warning was issued for rosiglitazone in 2007 that highlighted the cardiovascular risks associated with using the drug. Conversely, DPP-4 inhibitors and GLP-1 receptor agonists gained market shares due to their efficacy in glycemic control as an add-on treatment to metformin. DPP-4 inhibitors were the most commonly prescribed agents among the three novel drug classes, likely because they are relatively less expensive, have better safety profile, are administered orally, and are weight neutral. Sitagliptin was the most preferred DPP-4 inhibitor. The level of evidence on the comparative effectiveness, safety, and cost implications of using novel antidiabetic agents remains low and further studies with long-term follow-ups are needed. PMID:27076180

  5. Zinc and copper uptake by plants under two transpiration rates. Part I. Wheat (Triticum aestivum L.).

    PubMed

    Tani, F H; Barrington, S

    2005-12-01

    To evaluate the environmental risk of irrigating crops with treated wastewater, an experiment was conducted using two growth chambers, each offering a different vapour pressure deficit (VPD) for high and low transpiration rates (TR), respectively. One of the two sets of 24 pots planted with 6 week old wheat (Triticum aestivum L.), was placed in each growth chamber, and irrigated in triplicates for 20 days with 8 Zn and Cu solutions (0 and 25 mg Zn/L combined with 0, 5, 15 and 30 mg Cu/L). Water losses from planted and non-planted pots served to measure evapo-transpiration and evaporation, respectively. Pots were monitored for Cu and Zn uptake by collecting three plants (shoot and grain)/pots after 0, 10 and 20 days, and roots in each pot after 20 days, and analyzing these plant parts for dry mass, and Cu and Zn levels. Transpiration rate was not affected by any Cu/Zn treatment, but Cu and Zn uptake increase with the time, irrigation solution level and higher TR, with the roots retaining most Cu and Zn, compared to the shoot followed by the grain. For the shoot and grain, Cu had a significant synergetic effect on Zn uptake, when Zn had slight but insignificant antagonistic effects on Cu uptake. For the roots, Cu and Zn had significant synergetic effect on each other. Regression equations obtained from the data indicate that Cu and Zn levels normally found in treated wastewater (0.08 mg/L) are 300 times lower than those used for the most concentrated experimental solutions (30 and 25 mg/L, respectively) and may, on a long term basis, be beneficial rather than toxic to wheat plants and do not acidify soil pH.

  6. Distinguishing diffusional and plant control of Cd and Ni uptake by hyperaccumulator and nonhyperaccumulator plants.

    PubMed

    Luo, Jun; Zhang, Hao; Zhao, Fang-Jie; Davison, William

    2010-09-01

    This work set out to test the hypothesis that uptake of metals by hyperaccumulator (HA) plants is more likely to be diffusion limited than uptake by nonhyperaccumulator (NHA) plants. Two circumneutral soils, with different contents of organic matter (0.8 and 5.8%), were amended with Cd (0.5 to 5 mg kg(-1)) and Ni (10 to 100 mg kg(-1)). A Cd HA plant, Thlaspi caerulescens, was grown in pots containing the Cd amended soils, and a Ni HA, Thlaspi goesingense, was grown in pots containing the Ni amended soils. A NHA plant of the same family, Thlaspi arvense, was grown in the same soils. Metals were measured in both roots and shoots of all plants. Concentrations of Cd and Ni were measured in soil solution and using the technique of diffusive gradients in thin-films (DGT). The dependencies of metal measured by DGT, [M]DGT, and in soil solution, [M]ss, on the amended metal concentration, [M]add, were consistent with fast supply of Cd but a slower rate of release of Ni from solid phase to solution at lower [Ni]add. Detailed consideration of the dependence of Ni and Cd in shoots and roots on [M]add, [M]ss, and [M]DGT allowed assessment of the supply mechanism. The weight of evidence suggested that diffusion limitation applies for uptake of Cd by both HA and NHA plants and for uptake of Ni by the HA. However, uptake of Ni by the NHA is not limited by diffusion and the biotic ligand model is probably appropriate. PMID:20681510

  7. Approaches in the Determination of Plant Nutrient Uptake and Distribution in Space Flight Conditions

    NASA Technical Reports Server (NTRS)

    Heyenga, A. G.; Forsman, A.; Stodieck, L. S.; Hoehn, A.; Kliss, Mark

    1998-01-01

    The effective growth and development of vascular plants rely on the adequate availability of water and nutrients. Inefficiency in either the initial absorption, transportation, or distribution of these elements are factors which may impinge on plant structure and metabolic integrity. The potential effect of space flight and microgravity conditions on the efficiency of these processes is unclear. Limitations in the available quantity of space-grown plant material and the sensitivity of routine analytical techniques have made an evaluation of these processes impractical. However, the recent introduction of new plant cultivating methodologies supporting the application of radionuclide elements and subsequent autoradiography techniques provides a highly sensitive investigative approach amenable to space flight studies. Experiments involving the use of gel based 'nutrient packs' and the nuclides Ca45 and Fe59 were conducted on the Shuttle mission STS-94. Uptake rates of the radionuclides between ground and flight plant material appeared comparable.

  8. Approaches in the determination of plant nutrient uptake and distribution in space flight conditions

    NASA Technical Reports Server (NTRS)

    Heyenga, A. G.; Forsman, A.; Stodieck, L. S.; Hoehn, A.; Kliss, M.

    2000-01-01

    The effective growth and development of vascular plants rely on the adequate availability of water and nutrients. Inefficiency in either the initial absorption, transportation, or distribution of these elements are factors which impinge on plant structure and metabolic integrity. The potential effect of space flight and microgravity conditions on the efficiency of these processes is unclear. Limitations in the available quantity of space-grown plant material and the sensitivity of routine analytical techniques have made an evaluation of these processes impractical. However, the recent introduction of new plant cultivating methodologies supporting the application of radionuclide elements and subsequent autoradiography techniques provides a highly sensitive investigative approach amenable to space flight studies. Experiments involving the use of gel based 'nutrient packs' and the radionuclides calcium-45 and iron-59 were conducted on the Shuttle mission STS-94. Uptake rates of the radionuclides between ground and flight plant material appeared comparable.

  9. Uptake, translocation and metabolism of decabromodiphenyl ether (BDE-209) in seven aquatic plants.

    PubMed

    Deng, Daiyong; Liu, Jin; Xu, Meiying; Zheng, Guolu; Guo, Jun; Sun, Guoping

    2016-06-01

    Terrestrial plant uptake of PBDEs from contaminated soils has been widely reported recently. In this study the fate of deca-BDE within a plant/PBDEs/aquatic environment system was investigated through simulated pot experiments. Accumulations of the total PBDEs and deca-BDE were observed in tissues of seven test aquatic plant species, namely Phragmites australis, Cyperus papyrus, Alternanthera philoxeroides, Colocasia esculenta, Scirpus validus, Acorus calamus and Oryza sativa. In all seven plants, O. sativa leads the uptake and accumulation both in the total PBDEs (444.8 ng g(-1)) and deca-BDE (368.0 ng g(-1)) in roots. Among the six common phytoremediation aquatic plants, A. calamus leads the uptake (236.2 ng g(-1)), and P. australis leads the translocation (Cshoot/Croot = 0.35), while A. philoxeroides (43.4%) and P. australis (80.0%) lead in the metabolism efficiencies in the root and shoot, respectively. The detection of seventeen lesser brominated PBDE congeners provided the debromination evidence, and the specific PBDEs profiles in test plant species indicated there is no common metabolic pattern. Furthermore, a relative high proportion of lesser brominated PBDE congeners in shoots suggested the possible metabolic difference between roots and shoots. Finally, a noticeable percentage of penta- and octa-BDE derived from deca-BDE also hint the ecological risk in deca-BDE use. This comparative research on the aquatic plants provide a broad vision on the understanding of plant/PBDEs/aquatic environment interaction system, and may be applied to remediate PBDEs in contaminated waters and sediments. PMID:26994429

  10. Improvement of plant growth and nickel uptake by nickel resistant-plant-growth promoting bacteria.

    PubMed

    Ma, Ying; Rajkumar, Mani; Freitas, Helena

    2009-07-30

    In this study, among a collection of Ni-resistant bacterial strains isolated from the rhizosphere of Alyssum serpyllifolium and Phleum phleoides grown on serpentine soil, five plant growth-promoting bacteria (PGPB) were selected based on their ability to utilize 1-aminocyclopropane-1-carboxylate (ACC) as the sole N source and promote seedling growth. All of the strains tested positive for indole-3-acetic acid (IAA) production and phosphate solubilization. In addition, four of the strains exhibited significant levels of siderophores production. Further, the efficiency of PGPB in enhancing Ni solubilization in soils was analyzed. Compared with control treatment, inoculation of PGPB strains significantly increased the concentrations of bioavailable Ni. Furthermore, a pot experiment was conducted to elucidate the effects of inoculating Ni-resistant PGPB on the plant growth and the uptake of Ni by Brassica juncea and B. oxyrrhina in soil contaminated with 450 mg kg(-1) Ni. Psychrobacter sp. SRA2 significantly increased the fresh (351%) and dry biomass (285%) of the B. juncea test plants (p<0.05), whereas Psychrobacter sp. SRA1 and Bacillus cereus SRA10 significantly increased the accumulation of Ni in the root and shoot tissues of B. juncea compared with non-inoculated controls. This result indicates that the strains SRA1 and SRA10 facilitated the release of Ni from the non-soluble phases in the soil, thus enhancing the availability of Ni to plants. A significant increase, greater than that of the control, was also noted for growth parameters of the B. oxyrrhina test plants when the seeds were treated with strain SRA2. This effect can be attributed to the utilization of ACC, solubilization of phosphate and production of IAA. The results of the study revealed that the inoculation of Ni mobilizing strains Psychrobacter sp. SRA1 and B. cereus SRA10 increases the efficiency of phytoextraction directly by enhancing the metal accumulation in plant tissues and the efficient

  11. Effect, uptake and disposition of nitrobenzene in several terrestrial plants

    SciTech Connect

    McFarlane, C.; Pfleeger, T.; Fletcher, J.

    1990-01-01

    Eight species of plants were exposed to nitrobenzene in a hydroponic solution. Four species experienced no depression of either transpiration or photosynthetic rates, while one was rapidly killed and the other three were temporarily affected but recovered from the treatment. Uptake of nitrobenzene was passive and was shown to be proportional to the rate of water flux in each species. The transpiration stream concentration factor (TSCF) was 0.72. The root concentration factor (RCF) was variable between the species and was higher than expected, presumably due to deposits of insoluble metabolic products. All of the species examined displayed a capacity to chemically alter nonpolar nitrobenzene into both polar and insoluble products. Volatilization of nitrobenzene from the leaves was a major route of chemical loss.

  12. Plant uptake and enhanced dissipation of di(2-ethylhexyl) phthalate (DEHP) in spiked soils by different plant species.

    PubMed

    Li, Yan-Wen; Cai, Quan-Ying; Mo, Ce-Hui; Zeng, Qiao-Yun; Lü, Huixiong; Li, Qu-Sheng; Xu, Guo-Sheng

    2014-01-01

    This study was conducted to investigate the uptake, accumulation and the enhanced dissipation of di(2-ethylhexyl) phthalate (DEHP) spiked in soil (with a concentration of 117.4 +/- 5.2 mg kg(-1)) by eleven plants including eight maize (Zea mays) cultivars and three forage species (alfalfa, ryegrass and teosinte). The results showed that, after 40 days of treatment, the removal rates of DEHP ranged from 66.8% (for the control) to 87.5% (for the maize cultivar of Huanong-1). Higher removal rate was observed during the first 10 days than the following days. Plants enhanced significantly the dissipation of DEHP in soil. Enhanced dissipation amount in planted soil was 13.3-122 mg pot(-1) for DEHP, and a net removal of 2.2%-20.7% of the initial DEHP was obtained compared with non-plant soil. The contribution of plant uptake to the total enhanced dissipation was < 0.3%, and the enhanced dissipation of soil DEHP might be derived from plant-promoted biodegradation and sorption stronger to the soil. Nevertheless, the capability in accumulation and enhanced dissipation of DEHP from spiked soils varied within different species and cultivars.

  13. Dredged Illinois River Sediments: Plant Growth and Metal Uptake

    USGS Publications Warehouse

    Darmody, R.G.; Marlin, J.C.; Talbott, J.; Green, R.A.; Brewer, E.F.; Stohr, C.

    2004-01-01

    Sedimentation of the Illinois River in central Illinois has greatly diminished the utility and ecological value of the Peoria Lakes reach of the river. Consequently, a large dredging project has been proposed to improve its wildlife habitat and recreation potential, but disposal of the dredged sediment presents a challenge. Land placement is an attractive option. Previous work in Illinois has demonstrated that sediments are potentially capable of supporting agronomic crops due to their high natural fertility and water holding capacity. However, Illinois River sediments have elevated levels of heavy metals, which may be important if they are used as garden or agricultural soil. A greenhouse experiment was conducted to determine if these sediments could serve as a plant growth medium. A secondary objective was to determine if plants grown on sediments accumulated significant heavy metal concentrations. Our results indicated that lettuce (Lactuca sativa L.), barley (Hordeum vulgare L.), radish (Raphanus sativus L.), tomato (Lycopersicon lycopersicum L.), and snap bean (Phaseolus vulagaris L. var. humillis) grown in sediment and a reference topsoil did not show significant or consistent differences in germination or yields. In addition, there was not a consistent statistically significant difference in metal content among tomatoes grown in sediments, topsoil, or grown locally in gardens. In the other plants grown on sediments, while Cd and Cu in all cases and As in lettuce and snap bean were elevated, levels were below those considered excessive. Results indicate that properly managed, these relatively uncontaminated calcareous sediments can make productive soils and that metal uptake of plants grown in these sediments is generally not a concern.

  14. Effect of surface coating and organic matter on the uptake of CeO2 NPs by corn plants grown in soil: Insight into the uptake mechanism

    PubMed Central

    Zhao, Lijuan; Peralta-Videa, Jose R.; Varela-Ramirez, Armando; Castillo-Michel, Hiram; Li, Chunqiang; Zhang, Jianying; Aguilera, Renato J.; Keller, Arturo A.; Gardea-Torresdey, Jorge L.

    2015-01-01

    Little is known about the fate, transport, and bioavailability of CeO2 nanoparticles (NPs) in soil. Moreover, there are no reports on the effect of surface coating upon NPs uptake by plants. In this study, Zea mays plants were grown for one month in unenriched and organic soils treated with coated and uncoated CeO2 NPs. In addition, plants were exposed to fluorescein isothiocyanate (FITC)-stained CeO2 NPs and analyzed in a confocal microscope. In organic soil, roots from uncoated and coated NPs at 100, 200, 400, and 800 mg kg−1 had 40, 80, 130, and 260% and 10, 70, 90, and 40% more Ce, respectively, compared to roots from unenriched soil. Conversely, shoots of plants from unenriched soil had significantly more Ce compared with shoots from organic soil. Confocal fluorescence images showed FITC-stained CeO2 NP aggregates in cell walls of epidermis and cortex, suggesting apoplastic pathway. The μXRF results revealed the presence of CeO2 NP aggregates within vascular tissues. To the authors knowledge this is the first report on the effects of surface coating and organic matter on Ce uptake from CeO2 NPs and upon the mechanisms of CeO2 NPs uptake by higher plants PMID:22633924

  15. Reduced plant uptake of pesticides with biochar additions to soil.

    PubMed

    Yu, Xiang-Yang; Ying, Guang-Guo; Kookana, Rai S

    2009-07-01

    We investigated the effectiveness of two types of biochars in reducing the bioavailability of two soil-applied insecticides (chlorpyrifos and carbofuran) to Spring onion (Allium cepa). The biochars prepared from the pyrolysis of Eucalyptus spp. wood chips at 450 and 850 degrees C (BC850) were thoroughly mixed into the soil to achieve 0%, 0.1%, 0.5% and 1% by soil weight. A spring onion crop was grown for 5 wk in the biochar-amended soils spiked with 50 mgkg(-1) of each pesticide. The loss of both pesticides due to degradation and or sequestration in soils decreased significantly with increasing amounts of biochars in soil. Over 35 d, 86-88% of the pesticides were lost from the control soil, whereas it was only 51% of carbofuran and 44% of chlorpyrifos from the soil amended with 1.0% BC850. Despite greater persistence of the pesticide residues in biochar-amended soils, the plant uptake of pesticides decreased markedly with increasing biochar content of the soil. With 1% of BC850 soil amendment, the total plant residues for chlorpyrifos and carbofuran decreased to 10% and 25% of that in the control treatment, respectively. The BC850 was particularly effective in reducing phytoavailability of both pesticides from soil, due to its high affinity for and ability to sequester pesticide residues.

  16. Reduced plant uptake of pesticides with biochar additions to soil.

    PubMed

    Yu, Xiang-Yang; Ying, Guang-Guo; Kookana, Rai S

    2009-07-01

    We investigated the effectiveness of two types of biochars in reducing the bioavailability of two soil-applied insecticides (chlorpyrifos and carbofuran) to Spring onion (Allium cepa). The biochars prepared from the pyrolysis of Eucalyptus spp. wood chips at 450 and 850 degrees C (BC850) were thoroughly mixed into the soil to achieve 0%, 0.1%, 0.5% and 1% by soil weight. A spring onion crop was grown for 5 wk in the biochar-amended soils spiked with 50 mgkg(-1) of each pesticide. The loss of both pesticides due to degradation and or sequestration in soils decreased significantly with increasing amounts of biochars in soil. Over 35 d, 86-88% of the pesticides were lost from the control soil, whereas it was only 51% of carbofuran and 44% of chlorpyrifos from the soil amended with 1.0% BC850. Despite greater persistence of the pesticide residues in biochar-amended soils, the plant uptake of pesticides decreased markedly with increasing biochar content of the soil. With 1% of BC850 soil amendment, the total plant residues for chlorpyrifos and carbofuran decreased to 10% and 25% of that in the control treatment, respectively. The BC850 was particularly effective in reducing phytoavailability of both pesticides from soil, due to its high affinity for and ability to sequester pesticide residues. PMID:19419749

  17. Simultaneous monitoring of electrical capacitance and water uptake activity of plant root system

    NASA Astrophysics Data System (ADS)

    Cseresnyés, Imre; Takács, Tünde; Füzy, Anna; Rajkai, Kálmán

    2014-10-01

    Pot experiments were designed to test the applicability of root electrical capacitance measurement for in situ monitoring of root water uptake activity by growing cucumber and bean cultivars in a growth chamber. Half of the plants were inoculated with Funneliformis mosseae arbuscular mycorrhizal fungi, while the other half served as non-infected controls. Root electrical capacitance and daily transpiration were monitored during the whole plant ontogeny. Phenology-dependent changes of daily transpiration (related to root water uptake) and root electrical capacitance proved to be similar as they showed upward trends from seedling emergence to the beginning of flowering stage, and thereafter decreased continuously during fruit setting. A few days after arbuscular mycorrhizal fungi-colonization, daily transpiration and root electrical capacitance of infected plants became significantly higher than those of non-infected counterparts, and the relative increment of the measured parameters was greater for the more highly mycorrhizal-dependent bean cultivar compared to that of cucumber. Arbuscular mycorrhizal fungi colonization caused 29 and 69% relative increment in shoot dry mass for cucumbers and beans, respectively. Mycorrhization resulted in 37% increase in root dry mass for beans, but no significant difference was observed for cucumbers. Results indicate the potential of root electrical capacitance measurements for monitoring the changes and differences of root water uptake rate.

  18. Enhancement of cadmium uptake by Amaranthus caudatus, an ornamental plant, using tea saponin.

    PubMed

    Cay, Seydahmet

    2016-06-01

    In this study, tea saponin (TS) was extracted from tea camellia seed by microwave-assisted extraction. The potential of TS was compared with ethylenediaminetetracetic acid (EDTA), which is used as a common chemical agent to enhance uptake of cadmium (Cd) by Amaranthus caudatus, an ornamental plant in the natural vegetation of Turkey under pot conditions. The enrichment coefficient (EC) and translocation factor (TF) values were calculated to evaluate the removal efficiency of the TS and EDTA. The results showed that an increase in both TS and EDTA concentration significantly increased Cd uptake by A. caudatus, accumulating Cd in different parts of the plant. Higher EC and TF values obtained from stems, leaves, and inflorescences of A. caudatus showed that this plant might be cultivated and used as a hyperaccumulator in the uptake of Cd from the Cd contaminated soils. Thus, the present technique can efficiently reduce the metal load in the food chain; hence, it could be applied in catchment areas of urban cities where Cd contamination has become an unavoidable factor. PMID:27142816

  19. Analytical Advection-Dispersion Model for Transport and Plant Uptake of Solutes in the Root Zone

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We develop an advective-dispersive solute transport equation that includes plant uptake of water and solute, and present an analytical solution. Assumptions underlying the transport model include linear solute sorption, first-order plant uptake, and a uniform soil water content. We examine the lat...

  20. Variable effects of plant colonization on black slate uptake into microbial PLFAs

    NASA Astrophysics Data System (ADS)

    Seifert, Anne-Gret; Trumbore, Susan; Xu, Xiaomei; Zhang, Dachung; Gleixner, Gerd

    2013-04-01

    Microbial degradation of carbon derived from black shale and slate has been shown in vitro. However, in natural settings where other labile carbon sources are likely to exist, this has not been previously demonstrated. We investigated the uptake of ancient carbon derived from slate weathering and from recently photosynthesised organic matter by different groups of microorganisms. Therefore we isolated microbial biomarkers (phospholipid fatty acids, PLFAs) from black slates collected at a chronosequence of waste piles which differed in age and vegetation cover. We quantified the amount of PLFAs and performed stable isotope and radiocarbon measurements on individual or grouped PLFAs to quantify the fraction of slate derived carbon. We used black slate from a pile heaped in the 1950s with either uncovered black slate material (bare site) or material slightly colonized by small plants (greened site) and from a forested leaching pile (forested site) used for alum-mining in the 19th century. Colonization by plants influenced the amount and composition of the microbial community. Greater amounts of PLFAs (5410 ng PLFA/g dw) were extracted from slate sampled at the forested site as opposed to the bare site (960 ng PLFAs/g dw) or the greened (annual grasses and mosses) rock waste pile (1050 ng PLFAs/g dw). We found the highest proportion of PLFAs representing Gram-negative bacteria on the forested site and the highest proportion of PLFAs representing Gram-positive bacteria on the bare site. The fungal PLFA was most abundant at the greened site. Sites with less plant colonization (bare and greened site) tended to have more depleted δ13C values compared to the forested site. Radiocarbon measurements on PLFAs indicated that fungi and Gram-positive bacteria were best adapted to black slate carbon uptake. In the fungal PLFA (combined bare and greened waste pile sample) and in PLFAs of Gram-positive bacteria (greened site) we measured 39.7% and 28.9% ancient carbon uptake

  1. [Physiological processes and major regulating factors of nitrogen uptake by plant roots].

    PubMed

    Huo, Chang-fu; Sun, Hai-long; Fan, Zhi-qiang; Wang, Zheng-quan

    2007-06-01

    Soil nitrogen (N) is one of the mineral elements absorbed in large amount by plant roots, while global change could affect its availability, and furthermore, affect the carbon (C) allocation in terrestrial ecosystem. Therefore, the study of plant root N uptake and regulation becomes an important issue in predicting the structure and function of ecosystem. In the biosphere, plants are exposed to different N forms, and long-term biological evolution and environmental adaptation resulted in a significant distinction of plant root N uptake regions and metabolic processes, as well as the regulation of the N uptake. However, plant has formed different mechanisms and strategies for N uptake, because of their living in the soil with dominant sole N form for generations. In this paper, the research advances on how plant root absorbs N and which factors control the N absorption processes were reviewed, with the biological availability of different soil N forms (nitrate, ammonium and organic N), N uptake regions in root, N loading and transport in xylem, and uptake mechanisms of different N forms emphasized. The signal regulation of N uptake and the effects of environmental factors were also considered. Several issues about the present researches on plant root N uptake were discussed.

  2. How do microorganisms influence trace element uptake by plants? Screening in an agar model rhizosphere.

    NASA Astrophysics Data System (ADS)

    Marchetti, M.; Robinson, B. H.; Evangelou, M. W. H.; Vachey, A.; Schwitzguebel, J. P.; Bernier-Latmani, R.; Schulin, R.

    2009-04-01

    sterile, transparent plastic boxes, whose lid was equipped with a filter allowing gas exchanges without contamination by external microorganisms. The seed surface was sterilised and the plants grew one week in agar before their rhizosphere was inoculated with LB broth containing a pure bacterial strain or agar plugs colonized by fungal hyphae. We tested 14 strains, with 5 replicates per treatment and a control where the system was inoculated with sterile LB broth. The plants grew for 2 weeks in a climate chamber and their shoots were analysed for their TEs by ICP-OES. Samples of agar and roots were collected to confirm microbial colonization of the rhizosphere, respectively sterile conditions in the control treatments. Concerning the method development, the plants grew without visible toxicity in all the boxes, and the analysis of root and agar samples indicated that the controls were sterile and the strains inoculated were growing along the roots. More than 90% of the TE and nutrients added to the system were in the liquid fraction of the agar medium, thus available for root uptake. The screening showed that the microorganisms in general decreased TE uptake by wheat and sunflower, although some of them had an opposite effect on the plants. However, with the same plant species, the microorganisms had a consistent effect on all TE tested, i.e. a given single strain caused the same effect (increase or decrease of TE uptake) on all TE tested. In sunflower, 3 microorganisms (Paenibacillus polymyxa, Pythium ultimum and Rhizoctonia solani) decreased Cu and Zn uptake by 50% compared to the control treatment. These three species are common soil microorganisms. All three are known to exude auxin, a phytohormone. This hormone can modify root morphology and physiology and thus may affect TE uptake by plants. R. solani and P. ultimum are root pathogens. Their effect was opposite to what we expected. If roots are damaged, TE should have flooded into the plant and accumulate in the

  3. Anomalous uptake and circulatory characteristics of the plant-based small RNA MIR2911

    PubMed Central

    Yang, Jian; Hotz, Tremearne; Broadnax, LaCassidy; Yarmarkovich, Mark; Elbaz-Younes, Ismail; Hirschi, Kendal D.

    2016-01-01

    Inconsistent detection of plant-based dietary small RNAs in circulation has thwarted the use of dietary RNA therapeutics. Here we demonstrate mice consuming diets rich in vegetables displayed enhanced serum levels of the plant specific small RNA MIR2911. Differential centrifugation, size-exclusion chromatography, and proteinase K treatment of plant extracts suggest this RNA resides within a proteinase K-sensitive complex. Plant derived MIR2911 was more bioavailable than the synthetic RNA. Furthermore, MIR2911 exhibited unusual digestive stability compared with other synthetic plant microRNAs. The characteristics of circulating MIR2911 were also unusual as it was not associated with exosomes and fractionated as a soluble complex that was insensitive to proteinase K treatment, consistent with MIR2911 being stabilized by modifications conferred by the host. These results indicate that intrinsic stability and plant-based modifications orchestrate consumer uptake of this anomalous plant based small RNA and invite revisiting plant-based microRNA therapeutic approaches. PMID:27251858

  4. Relative importance of plant uptake and plant associated denitrification for removal of nitrogen from mine drainage in sub-arctic wetlands.

    PubMed

    Hallin, Sara; Hellman, Maria; Choudhury, Maidul I; Ecke, Frauke

    2015-11-15

    Reactive nitrogen (N) species released from undetonated ammonium-nitrate based explosives used in mining or other blasting operations are an emerging environmental problem. Wetlands are frequently used to treat N-contaminated water in temperate climate, but knowledge on plant-microbial interactions and treatment potential in sub-arctic wetlands is limited. Here, we compare the relative importance of plant uptake and denitrification among five plant species commonly occurring in sub-arctic wetlands for removal of N in nitrate-rich mine drainage in northern Sweden. Nitrogen uptake and plant associated potential denitrification activity and genetic potential for denitrification based on quantitative PCR of the denitrification genes nirS, nirK, nosZI and nosZII were determined in plants growing both in situ and cultivated in a growth chamber. The growth chamber and in situ studies generated similar results, suggesting high relevance and applicability of results from growth chamber experiments. We identified denitrification as the dominating pathway for N-removal and abundances of denitrification genes were strong indicators of plant associated denitrification activity. The magnitude and direction of the effect differed among the plant species, with the aquatic moss Drepanocladus fluitans showing exceptionally high ratios between denitrification and uptake rates, compared to the other species. However, to acquire realistic estimates of N-removal potential of specific wetlands and their associated plant species, the total plant biomass needs to be considered. The species-specific plant N-uptake and abundance of denitrification genes on the root or plant surfaces were affected by the presence of other plant species, which show that both multi- and inter-trophic interactions are occurring. Future studies on N-removal potential of wetland plant species should consider how to best exploit these interactions in sub-arctic wetlands.

  5. Regional investigations of soil and overburden analysis and plant uptake of metals

    USGS Publications Warehouse

    Gough, L.P.

    1984-01-01

    Regional studies on the bioavailability of metals at native and disturbed sites were conducted over the past seven years by the USGS. The work was concentrated in the Fort Union, Powder River, and Green River coal resource regions where measures of extractable metals in soils were found to have limited use in predicting metal levels in plants. Correlations between Cu, Fe, and Zn in plants and extractable (DTPA, EDTA, and oxalate) or total levels in native A- and C-horizons of soil were occasionally significant. A simple linear model is generally not adequate, however, in estimating element uptake by plants. Prediction capabilities were improved when a number of soil chemical and physical parameters were included as independent variables in a stepwise linear multiple regression analysis; however, never more than 54% of the total variability in the data was explained by the equations for these metals. Soil pH was the most important variable relating soil chemistry to plant chemistry. This relation was always positive and apparently a response to soil levels of metal carbonates and not Fe and Mn oxides. Studies that compared the metal uptake by rehabilitation species to extractable (DTPA) metal levels in mice soils produced similar results. ?? 1984 Science and Technology Letters.

  6. Plant nitrogen uptake drives responses of productivity to nitrogen and water addition in a grassland

    PubMed Central

    Lü, Xiao-Tao; Dijkstra, Feike A.; Kong, De-Liang; Wang, Zheng-Wen; Han, Xing-Guo

    2014-01-01

    Increased atmospheric nitrogen (N) deposition and altered precipitation regimes have profound impacts on ecosystem functioning in semiarid grasslands. The interactions between those two factors remain largely unknown. A field experiment with N and water additions was conducted in a semiarid grassland in northern China. We examined the responses of aboveground net primary production (ANPP) and plant N use during two contrasting hydrological growing seasons. Nitrogen addition had no impact on ANPP, which may be accounted for by the offset between enhanced plant N uptake and decreased plant nitrogen use efficiency (NUE). Water addition significantly enhanced ANPP, which was largely due to enhanced plant aboveground N uptake. Nitrogen and water additions significantly interacted to affect ANPP, plant N uptake and N concentrations at the community level. Our observations highlight the important role of plant N uptake and use in mediating the effects of N and water addition on ANPP. PMID:24769508

  7. Impact of elemental uptake in the root chemistry of wetland plants.

    PubMed

    Aryal, Rupak; Nirola, Ramkrishna; Beecham, Simon; Kamruzzaman, Mohammad

    2016-09-01

    Plants play a key role in the accumulation of metals in contaminated environment. Ephemeral plants, such as cyperus vaginatus, from the family Cyperaceae have been used in constructed wetlands to alter the biogeochemistry of waterlogged soils. High elemental content in wetlands often induces chemical changes in the root, stem and leaf of wetland plants. Elemental uptake and possible chemical changes in the roots of Cyperus vaginatus was investigated and compared with plants grown away from the wetland. Among the 9 heavy metals (Cr, Mn, Fe, Co, Ni, Cu, Zn, Cd, and Pb) and metalloid (As) measured, with the exception of Mn, all metals had higher content in the plant roots grown within the wetland. This was followed by plants grown near to the wetland that receive stormwater occasionally and then plants grown far from the wetland. The 3-D fluorescence spectra record showed notable differences in the chemical composition of roots grown in the three locations. The spectra combined with parallel factor analysis showed three dominant fluorescence components. Comparison of the fluorescence signatures showed a continuum of spectral properties constrained by the degree of metal contamination.

  8. Impact of elemental uptake in the root chemistry of wetland plants.

    PubMed

    Aryal, Rupak; Nirola, Ramkrishna; Beecham, Simon; Kamruzzaman, Mohammad

    2016-09-01

    Plants play a key role in the accumulation of metals in contaminated environment. Ephemeral plants, such as cyperus vaginatus, from the family Cyperaceae have been used in constructed wetlands to alter the biogeochemistry of waterlogged soils. High elemental content in wetlands often induces chemical changes in the root, stem and leaf of wetland plants. Elemental uptake and possible chemical changes in the roots of Cyperus vaginatus was investigated and compared with plants grown away from the wetland. Among the 9 heavy metals (Cr, Mn, Fe, Co, Ni, Cu, Zn, Cd, and Pb) and metalloid (As) measured, with the exception of Mn, all metals had higher content in the plant roots grown within the wetland. This was followed by plants grown near to the wetland that receive stormwater occasionally and then plants grown far from the wetland. The 3-D fluorescence spectra record showed notable differences in the chemical composition of roots grown in the three locations. The spectra combined with parallel factor analysis showed three dominant fluorescence components. Comparison of the fluorescence signatures showed a continuum of spectral properties constrained by the degree of metal contamination. PMID:26709636

  9. Uptake and translocation of Ti from nanoparticles in crops and wetland plants.

    PubMed

    Jacob, Donna L; Borchardt, Joshua D; Navaratnam, Leelaruban; Otte, Marinus L; Bezbaruah, Achintya N

    2013-01-01

    Bioavailability of engineered metal nanoparticles affects uptake in plants, impacts on ecosystems, and phytoremediation. We studied uptake and translocation of Ti in plants when the main source of this metal was TiO2 nanoparticles. Two crops (Phaseolus vulgaris (bean) and Triticum aestivum (wheat)), a wetland species (Rumex crispus, curly dock), and the floating aquatic plant (Elodea canadensis, Canadian waterweed), were grown in nutrient solutions with TiO2 nanoparticles (0, 6, 18 mmol Ti L(-1) for P. vulgaris, T. aestivum, and R. crispus; and 0 and 12 mmol Ti L(-1) for E. canadensis). Also examined in E. canadensis was the influence of TiO2 nanoparticles upon the uptake of Fe, Mn, and Mg, and the influence of P on Ti uptake. For the rooted plants, exposure to TiO2 nanoparticles did not affect biomass production, but significantly increased root Ti sorption and uptake. R. crispus showed translocation of Ti into the shoots. E. canadensis also showed significant uptake of Ti, P in the nutrient solution significantly decreased Ti uptake, and the uptake patterns of Mn and Mg were altered. Ti from nano-Ti was bioavailable to plants, thus showing the potential for cycling in ecosystems and for phytoremediation, particularly where water is the main carrier.

  10. Effects of different forms of nitrogen fertilizers on arsenic uptake by rice plants.

    PubMed

    Chen, Xue-Ping; Zhu, Yong-Guan; Hong, Mi-Na; Kappler, Andreas; Xu, Yu-Xin

    2008-04-01

    A pot microcosm experiment was conducted to investigate the effect of different forms of N fertilizers on As uptake by rice. Compared to a nontreated control, addition of nitrate reduced Fe(II) concentration in soil solution, while treatment with ammonium enhanced Fe(III) reduction, probably coupled to NH(4)(+) oxidation in the nonrhizosphere. Most-probable-number (MPN) enumerations revealed high densities of nitrate-dependent Fe(II)-oxidizing microorganisms. The addition of nitrate decreased Fe plaque formation on the root surface, accompanied by much lower dissolved Fe(II) concentrations in the rhizosphere soil solution compared to the nonamended control. Nitrate addition also reduced As uptake by the rice plant. These results suggest that nitrate may inhibit Fe(III) reduction and/or stimulate nitrate-dependent Fe(II) oxidation, leading to As coprecipitation with, or adsorption to, Fe(III) minerals in the soil. Although Fe plaque formation on the root surface is reduced, nitrate-dependent stimulation of Fe(II) oxidation and/or inhibition of Fe(III) reduction in the bulk soil sequesters mobile As in the soil, resulting in reduced As uptake by rice.

  11. Plant iodine-131 uptake in relation to root concentration as measured in minirhizotron by video camera:

    SciTech Connect

    Moss, K.J.

    1990-09-01

    Glass viewing tubes (minirhizotrons) were placed in the soil beneath native perennial bunchgrass (Agropyron spicatum). The tubes provided access for observing and quantifying plant roots with a miniature video camera and soil moisture estimates by neutron hydroprobe. The radiotracer I-131 was delivered to the root zone at three depths with differing root concentrations. The plant was subsequently sampled and analyzed for I-131. Plant uptake was greater when I-131 was applied at soil depths with higher root concentrations. When I-131 was applied at soil depths with lower root concentrations, plant uptake was less. However, the relationship between root concentration and plant uptake was not a direct one. When I-131 was delivered to deeper soil depths with low root concentrations, the quantity of roots there appeared to be less effective in uptake than the same quantity of roots at shallow soil depths with high root concentration. 29 refs., 6 figs., 11 tabs.

  12. Effect of arbuscular mycorrhizal (AM) fungi on 137Cs uptake by plants grown on different soils.

    PubMed

    Vinichuk, M; Mårtensson, A; Ericsson, T; Rosén, K

    2013-01-01

    The potential use of mycorrhiza as a bioremediation agent for soils contaminated by radiocesium was evaluated in a greenhouse experiment. The uptake of (137)Cs by cucumber, perennial ryegrass, and sunflower after inoculation with a commercial arbuscular mycorrhizal (AM) product in soils contaminated with (137)Cs was investigated, with non-mycorrhizal quinoa included as a "reference" plant. The effect of cucumber and ryegrass inoculation with AM fungi on (137)Cs uptake was inconsistent. The effect of AM fungi was most pronounced in sunflower: both plant biomass and (137)Cs uptake increased on loamy sand and loamy soils. The total (137)Cs activity accumulated within AM host sunflower on loamy sand and loamy soils was 2.4 and 3.2-fold higher than in non-inoculated plants. Although the enhanced uptake of (137)Cs by quinoa plants on loamy soil inoculated by the AM fungi was observed, the infection of the fungi to the plants was not confirmed. PMID:22939950

  13. Iron uptake system mediates nitrate-facilitated cadmium accumulation in tomato (Solanum lycopersicum) plants.

    PubMed

    Luo, Bing Fang; Du, Shao Ting; Lu, Kai Xing; Liu, Wen Jing; Lin, Xian Yong; Jin, Chong Wei

    2012-05-01

    Nitrogen (N) management is a promising agronomic strategy to minimize cadmium (Cd) contamination in crops. However, it is unclear how N affects Cd uptake by plants. Wild-type and iron uptake-inefficient tomato (Solanum lycopersicum) mutant (T3238fer) plants were grown in pH-buffered hydroponic culture to investigate the direct effect of N-form on Cd uptake. Wild-type plants fed NO₃⁻ accumulated more Cd than plants fed NH₄⁺. Iron uptake and LeIRT1 expression in roots were also greater in plants fed NO₃⁻. However, in mutant T3238fer which loses FER function, LeIRT1 expression in roots was almost completely terminated, and the difference between NO₃⁻ and NH₄⁺ treatments vanished. As a result, the N-form had no effect on Cd uptake in this mutant. Furthermore, suppression of LeIRT1 expression by NO synthesis inhibition with either tungstate or L-NAME, also substantially inhibited Cd uptake in roots, and the difference between N-form treatments was diminished. Considering all of these findings, it was concluded that the up-regulation of the Fe uptake system was responsible for NO₃⁻-facilitated Cd accumulation in plants.

  14. Nematodes enhance plant growth and nutrient uptake under C and N-rich conditions.

    PubMed

    Gebremikael, Mesfin T; Steel, Hanne; Buchan, David; Bert, Wim; De Neve, Stefaan

    2016-01-01

    The role of soil fauna in crucial ecosystem services such as nutrient cycling remains poorly quantified, mainly because of the overly reductionistic approach adopted in most experimental studies. Given that increasing nitrogen inputs in various ecosystems influence the structure and functioning of soil microbes and the activity of fauna, we aimed to quantify the role of the entire soil nematode community in nutrient mineralization in an experimental set-up emulating nutrient-rich field conditions and accounting for crucial interactions amongst the soil microbial communities and plants. To this end, we reconstructed a complex soil foodweb in mesocosms that comprised largely undisturbed native microflora and the entire nematode community added into defaunated soil, planted with Lolium perenne as a model plant, and amended with fresh grass-clover residues. We determined N and P availability and plant uptake, plant biomass and abundance and structure of the microbial and nematode communities during a three-month incubation. The presence of nematodes significantly increased plant biomass production (+9%), net N (+25%) and net P (+23%) availability compared to their absence, demonstrating that nematodes link below- and above-ground processes, primarily through increasing nutrient availability. The experimental set-up presented allows to realistically quantify the crucial ecosystem services provided by the soil biota. PMID:27605154

  15. Nematodes enhance plant growth and nutrient uptake under C and N-rich conditions

    PubMed Central

    Gebremikael, Mesfin T.; Steel, Hanne; Buchan, David; Bert, Wim; De Neve, Stefaan

    2016-01-01

    The role of soil fauna in crucial ecosystem services such as nutrient cycling remains poorly quantified, mainly because of the overly reductionistic approach adopted in most experimental studies. Given that increasing nitrogen inputs in various ecosystems influence the structure and functioning of soil microbes and the activity of fauna, we aimed to quantify the role of the entire soil nematode community in nutrient mineralization in an experimental set-up emulating nutrient-rich field conditions and accounting for crucial interactions amongst the soil microbial communities and plants. To this end, we reconstructed a complex soil foodweb in mesocosms that comprised largely undisturbed native microflora and the entire nematode community added into defaunated soil, planted with Lolium perenne as a model plant, and amended with fresh grass-clover residues. We determined N and P availability and plant uptake, plant biomass and abundance and structure of the microbial and nematode communities during a three-month incubation. The presence of nematodes significantly increased plant biomass production (+9%), net N (+25%) and net P (+23%) availability compared to their absence, demonstrating that nematodes link below- and above-ground processes, primarily through increasing nutrient availability. The experimental set-up presented allows to realistically quantify the crucial ecosystem services provided by the soil biota. PMID:27605154

  16. Behavior and impact of zirconium in the soil-plant system: plant uptake and phytotoxicity.

    PubMed

    Shahid, Muhammad; Ferrand, Emmanuel; Schreck, Eva; Dumat, Camille

    2013-01-01

    Zirconium (Zr) is a transition metal that has both stable and radioactive isotopes.This metal has gained significant attention as a major pollutant of concern, partly because it has been prominent in the debate concerning the growing anthropogenic pressure on the environment. Its numerous past and present uses have induced significant soil and water pollution. Zr is generally considered to have low mobility in soils. The behavior of Zr particularly depends on the characteristics of the media in which it exists, and even its presence in the biosphere as a contaminate may affect its behavior. In this chapter, we describe the relationship between the behavior of Zrand its speciation in soils, its uptake and accumulation by plants, its translocation and toxicity inside plants, and mechanisms by which plants detoxify it.Zr is abundant and occurs naturally in the earth's crust. Zr emissions to the atmosphere are increasing from anthropogenic activities such as its use in industry and nuclear reactors. Zr forms various complexes with soil components, which reduces its soil mobility and phytoavailabilty. The mobility and phytoavailabilty of Zr in soil depend on its speciation and the physicochemical properties of soil that include soil pH, texture, and organic contents. Despite having low soil mobility and phytoavailability,amounts of Zr are absorbed by plants, mainly through the root system and can thereby enter the food chain.After plant uptake, Zr mainly accumulates in root cells. Zr does not have any known essential function in plant or animal metabolism. Although little published data are available, we conclude that the phytotoxicity of Zr is generally low.Notwithstanding, Zr can significantly reduce plant growth and can affect plantenzyme activity. When exposed to Zr-induced toxicity, plants possess numerous defense mechanisms to cope with the toxicity. Such strategies include Zr sequestration in plant roots and activation of various antioxidants. Because Zr may have

  17. Cyberinfrastructure for (Comparative) Plant Genome Research Through PlantGDB

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Accurate and comprehensive gene structure annotation in emerging and assembled genomes is fundamental to comparative, functional, and translational genomics. We plan to build the cyberinfrastructure necessary for defining and accessing the plant gene space. Our Plant Genetic Data Base (PlantGDB) r...

  18. Improving prediction of metal uptake by Chinese cabbage (Brassica pekinensis L.) based on a soil-plant stepwise analysis.

    PubMed

    Zhang, Sha; Song, Jing; Gao, Hui; Zhang, Qiang; Lv, Ming-Chao; Wang, Shuang; Liu, Gan; Pan, Yun-Yu; Christie, Peter; Sun, Wenjie

    2016-11-01

    It is crucial to develop predictive soil-plant transfer (SPT) models to derive the threshold values of toxic metals in contaminated arable soils. The present study was designed to examine the heavy metal uptake pattern and to improve the prediction of metal uptake by Chinese cabbage grown in agricultural soils with multiple contamination by Cd, Cu, Ni, Pb, and Zn. Pot experiments were performed with 25 historically contaminated soils to determine metal accumulation in different parts of Chinese cabbage. Different soil bioavailable metal fractions were determined using different extractants (0.43M HNO3, 0.01M CaCl2, 0.005M DTPA, and 0.01M LWMOAs), soil moisture samplers, and diffusive gradients in thin films (DGT), and the fractions were compared with shoot metal uptake using both direct and stepwise multiple regression analysis. The stepwise approach significantly improved the prediction of metal uptake by cabbage over the direct approach. Strongly pH dependent or nonlinear relationships were found for the adsorption of root surfaces and in root-shoot uptake processes. Metals were linearly translocated from the root surface to the root. Therefore, the nonlinearity of uptake pattern is an important explanation for the inadequacy of the direct approach in some cases. The stepwise approach offers an alternative and robust method to study the pattern of metal uptake by Chinese cabbage (Brassica pekinensis L.).

  19. Improving prediction of metal uptake by Chinese cabbage (Brassica pekinensis L.) based on a soil-plant stepwise analysis.

    PubMed

    Zhang, Sha; Song, Jing; Gao, Hui; Zhang, Qiang; Lv, Ming-Chao; Wang, Shuang; Liu, Gan; Pan, Yun-Yu; Christie, Peter; Sun, Wenjie

    2016-11-01

    It is crucial to develop predictive soil-plant transfer (SPT) models to derive the threshold values of toxic metals in contaminated arable soils. The present study was designed to examine the heavy metal uptake pattern and to improve the prediction of metal uptake by Chinese cabbage grown in agricultural soils with multiple contamination by Cd, Cu, Ni, Pb, and Zn. Pot experiments were performed with 25 historically contaminated soils to determine metal accumulation in different parts of Chinese cabbage. Different soil bioavailable metal fractions were determined using different extractants (0.43M HNO3, 0.01M CaCl2, 0.005M DTPA, and 0.01M LWMOAs), soil moisture samplers, and diffusive gradients in thin films (DGT), and the fractions were compared with shoot metal uptake using both direct and stepwise multiple regression analysis. The stepwise approach significantly improved the prediction of metal uptake by cabbage over the direct approach. Strongly pH dependent or nonlinear relationships were found for the adsorption of root surfaces and in root-shoot uptake processes. Metals were linearly translocated from the root surface to the root. Therefore, the nonlinearity of uptake pattern is an important explanation for the inadequacy of the direct approach in some cases. The stepwise approach offers an alternative and robust method to study the pattern of metal uptake by Chinese cabbage (Brassica pekinensis L.). PMID:27450258

  20. Plant uptake of explosives from contaminated soil at the Joliet Army Ammunition Plant

    SciTech Connect

    Zellmer, S.D.; Schneider, J.F.; Tomczyk, N.A.; Banwart, W.L.; Chen, D.

    1995-04-01

    Explosives and their degradation products may enter the animal and human food chains through plants grown on soils contaminated with explosives. Soil and plant samples were collected from the Group 61 area at the Joliet Army Ammunition Plant and analyzed to determine the extent to which 2,4,6-trinitrotoluene (TNT) and its degradation products are taken up by existing vegetation and crops growing on contaminated soils. Neither TNT nor its degradation products was detected in any of the aboveground plant organs of existing vegetation. Oat (Avena sativa L.) and perennial ryegrass (Lolium perenne L.) were planted on TNT-contaminated soils amended with three levels of chopped grass hay. Extractable TNT concentrations in hay-amended soils were monitored for almost 1 year. Crop establishment and growth improved with increased levels of hay amendment, but TNT uptake was not affected or detected in any aboveground crop organs. Evidence was found to indicate that soil manipulation and hay addition may reduce extractable TNT concentration in soils, but the wide variations in TNT concentrations in these soils prevented development of conclusive evidence regarding reduction of extractable TNT concentrations. Results from this study suggest that vegetation grown on TNT-contaminated soils is not a major health concern because TNT and its degradation products were not detected in aboveground plant organs. However, low concentrations of TNT, 4-amino-2,6-dinitrotoluene, and 2-amino-4,6-dinitrotoluene were detected in or on some existing vegetation and crop roots. 21 refs., 10 figs., 26 tabs.

  1. A SIMPLE MODEL FOR THE UPTAKE, TRANSLOCATION, AND ACCUMULATION OF PERCHLORATE IN TOBACCO PLANTS

    EPA Science Inventory

    A simple mathematical model is being developed to describe the uptake, translocation, and accumulation of perchlorate in tobacco plants. The model defines a plant as a set of compartments, consisting of mass balance differential equations and plant-specific physiological paramet...

  2. Barriers, pathways and processes for uptake, translocation and accumulation of nanomaterials in plants--Critical review.

    PubMed

    Schwab, Fabienne; Zhai, Guangshu; Kern, Meaghan; Turner, Amalia; Schnoor, Jerald L; Wiesner, Mark R

    2016-01-01

    Uptake, transport and toxicity of engineered nanomaterials (ENMs) into plant cells are complex processes that are currently still not well understood. Parts of this problem are the multifaceted plant anatomy, and analytical challenges to visualize and quantify ENMs in plants. We critically reviewed the currently known ENM uptake, translocation, and accumulation processes in plants. A vast number of studies showed uptake, clogging, or translocation in the apoplast of plants, most notably of nanoparticles with diameters much larger than the commonly assumed size exclusion limit of the cell walls of ∼5-20 nm. Plants that tended to translocate less ENMs were those with low transpiration, drought-tolerance, tough cell wall architecture, and tall growth. In the absence of toxicity, accumulation was often linearly proportional to exposure concentration. Further important factors strongly affecting ENM internalization are the cell wall composition, mucilage, symbiotic microorganisms (mycorrhiza), the absence of a cuticle (submerged plants) and stomata aperture. Mostly unexplored are the roles of root hairs, leaf repellency, pit membrane porosity, xylem segmentation, wounding, lateral roots, nodes, the Casparian band, hydathodes, lenticels and trichomes. The next steps towards a realistic risk assessment of nanoparticles in plants are to measure ENM uptake rates, the size exclusion limit of the apoplast and to unravel plant physiological features favoring uptake.

  3. UPTAKE AND PHYTOTRANSFORMATION OF ORGANOPHOSPHORUS PESTICIDES BY AXENICALLY CULTIVATED AQUATIC PLANTS

    EPA Science Inventory

    The uptake and phytotransformation of organophosphorus (OP) pesticides (malathion, demeton-S-methyl, and crufomate) was investigated in vitro using the axenically aquatic cultivated plants parrot feather (Myriophyllum aquaticum), duckweed (Spirodela oligorrhiza L.), and elodea (E...

  4. Hydraulic resistance of a plant root to water-uptake: A slender-body theory.

    PubMed

    Chen, Kang Ping

    2016-05-01

    A slender-body theory for calculating the hydraulic resistance of a single plant root is developed. The work provides an in-depth discussion on the procedure and the assumptions involved in calculating a root׳s internal hydraulic resistance as well as the physical and the mathematical aspects of the external three-dimensional flow around the tip of a root in a saturated soil and how this flow pattern enhances uptake and reduces hydraulic resistance. Analytical solutions for the flux density distribution on the stele-cortex interface, local water-uptake profile inside the stele core, the overall water-uptake at the base of the stele, and the total hydraulic resistance of a root are obtained in the slender-body limit. It is shown that a key parameter controlling a root's hydraulic resistance is the dimensionless axial conductivity in the stele, which depends on the permeabilities of the stele and the cortex as well as the root's radial and axial dimensions. Three-dimensional tip effect reduces a root's hydraulic resistance by as much as 36% when compared to the radial flow theory of Landsberg and Fowkes. In addition, the total hydraulic resistance cannot be generally decomposed into the direct sum of a radial resistance and an axial resistance.

  5. Hydraulic resistance of a plant root to water-uptake: A slender-body theory.

    PubMed

    Chen, Kang Ping

    2016-05-01

    A slender-body theory for calculating the hydraulic resistance of a single plant root is developed. The work provides an in-depth discussion on the procedure and the assumptions involved in calculating a root׳s internal hydraulic resistance as well as the physical and the mathematical aspects of the external three-dimensional flow around the tip of a root in a saturated soil and how this flow pattern enhances uptake and reduces hydraulic resistance. Analytical solutions for the flux density distribution on the stele-cortex interface, local water-uptake profile inside the stele core, the overall water-uptake at the base of the stele, and the total hydraulic resistance of a root are obtained in the slender-body limit. It is shown that a key parameter controlling a root's hydraulic resistance is the dimensionless axial conductivity in the stele, which depends on the permeabilities of the stele and the cortex as well as the root's radial and axial dimensions. Three-dimensional tip effect reduces a root's hydraulic resistance by as much as 36% when compared to the radial flow theory of Landsberg and Fowkes. In addition, the total hydraulic resistance cannot be generally decomposed into the direct sum of a radial resistance and an axial resistance. PMID:26920247

  6. Relation of organic contaminant equilibrium sorption and kinetic uptake in plants

    USGS Publications Warehouse

    Li, H.; Sheng, G.; Chiou, C.T.; Xu, O.

    2005-01-01

    Plant uptake is one of the environmental processes that influence contaminant fate. Understanding the magnitude and rate of plant uptake is critical to assessing potential crop contamination and the development of phytoremediation technologies. We determined (1) the partition-dominated equilibrium sorption of lindane (LDN) and hexachlorobenzene (HCB) by roots and shoots of wheat seedlings, (2) the kinetic uptake of LDN and HCB by roots and shoots of wheat seedlings, (3) the kinetic uptake of HCB, tetrachloroethylene (PCE), and trichloroethylene (TCE) by roots and shoots of ryegrass seedlings, and (4) the lipid, carbohydrate, and water contents of the plants. Although the determined sorption and the plant composition together suggest the predominant role of plant lipids for the sorption of LDN and HCB, the predicted partition with lipids of LDN and HCB using the octanol-water partition coefficients is notably lower than the measured sorption, due presumably to underestimation of the plant lipid contents and to the fact that octanol is less effective as a partition medium than plant lipids. The equilibrium sorption or the estimated partition can be viewed as the kinetic uptake limits. The uptakes of LDN, PCE, and TCE from water at fixed concentrations increased with exposure time in approach to steady states. The uptake of HCB did not reach a plateau within the tested time because of its exceptionally high partition coefficient. In all of the cases, the observed uptakes were lower than their respective limits, due presumably to contaminant dissipation in and limited water transpiration by the plants. ?? 2005 American Chemical Society.

  7. A new tool for plant cell biology: in vivo antibody uptake in plant protoplasts.

    PubMed

    Brière, C; Barthou, H; Petitprez, M

    2004-07-01

    We report on the in vivo uptake of antibodies into plant protoplasts. When protoplasts of sunflower, Arabidopsis or tobacco were incubated in vivo with an antibody, this antibody was detected by immunofluorescence in the cytoplasm and/or the nucleus, depending on the location of the target protein. Furthermore, when protoplasts were cultured in the presence of antibodies, specific effects were observed. Incubation with antibodies raised against p34cdc2 led to a strong inhibition of the division rate, and a decrease in the average DNA content of protoplasts. With antibodies against HaWLIM1, a LIM domain protein of the CRP type, a negative effect on actin organisation was observed. We conclude that antibodies can penetrate plant protoplasts in vivo, and thus may be used as powerful tools for the study of protein function.

  8. A Series RCL Circuit Theory for Analyzing Non-Steady-State Water Uptake of Maize Plants

    PubMed Central

    Zhuang, Jie; Yu, Gui-Rui; Nakayama, Keiichi

    2014-01-01

    Understanding water uptake and transport through the soil-plant continuum is vital for ecosystem management and agricultural water use. Plant water uptake under natural conditions is a non-steady transient flow controlled by root distribution, plant configuration, soil hydraulics, and climatic conditions. Despite significant progress in model development, a mechanistic description of transient water uptake has not been developed or remains incomplete. Here, based on advanced electrical network theory (RLC circuit theory), we developed a non-steady state biophysical model to mechanistically analyze the fluctuations of uptake rates in response to water stress. We found that the non-steady-state model captures the nature of instantaneity and hysteresis of plant water uptake due to the considerations of water storage in plant xylem and coarse roots (capacitance effect), hydraulic architecture of leaf system (inductance effect), and soil-root contact (fuse effect). The model provides insights into the important role of plant configuration and hydraulic heterogeneity in helping plants survive an adverse environment. Our tests against field data suggest that the non-steady-state model has great potential for being used to interpret the smart water strategy of plants, which is intrinsically determined by stem size, leaf size/thickness and distribution, root system architecture, and the ratio of fine-to-coarse root lengths. PMID:25335512

  9. A series RCL circuit theory for analyzing non-steady-state water uptake of maize plants.

    PubMed

    Zhuang, Jie; Yu, Gui-Rui; Nakayama, Keiichi

    2014-01-01

    Understanding water uptake and transport through the soil-plant continuum is vital for ecosystem management and agricultural water use. Plant water uptake under natural conditions is a non-steady transient flow controlled by root distribution, plant configuration, soil hydraulics, and climatic conditions. Despite significant progress in model development, a mechanistic description of transient water uptake has not been developed or remains incomplete. Here, based on advanced electrical network theory (RLC circuit theory), we developed a non-steady state biophysical model to mechanistically analyze the fluctuations of uptake rates in response to water stress. We found that the non-steady-state model captures the nature of instantaneity and hysteresis of plant water uptake due to the considerations of water storage in plant xylem and coarse roots (capacitance effect), hydraulic architecture of leaf system (inductance effect), and soil-root contact (fuse effect). The model provides insights into the important role of plant configuration and hydraulic heterogeneity in helping plants survive an adverse environment. Our tests against field data suggest that the non-steady-state model has great potential for being used to interpret the smart water strategy of plants, which is intrinsically determined by stem size, leaf size/thickness and distribution, root system architecture, and the ratio of fine-to-coarse root lengths.

  10. Relative humidity: important modifier of pollutant uptake by plants

    SciTech Connect

    McLaughlin, S.B.; Taylor, G.E.

    1981-01-09

    Laboratory measurements of foliar uptake of sulfur dioxide and ozone by red kidney beans demonstrated a strong effect of relative humidity on internal pollutant dose. Foliar uptake was enhanced two- to threefold for sulfur dioxide and three- to fourfold for ozone by an increase in relative humidity from 35 to 75 percent. For the same exposure concentration, vegetation growing in humid areas (such as the eastern United States) may experience a significantly greater internal flux of pollutants than that in more arid regions. 22 references, 1 figure, 1 table.

  11. Utilization of a Model for Uptake of Cadmium by Plants as a Phytoremediation Assessment Tool

    NASA Astrophysics Data System (ADS)

    Takahashi, M.; Furbish, D. J.; Clarke, J.

    2008-12-01

    Some traditional methods of environmental remediation, such as removal and disposal of contaminated soil, are loosing economic favor and public acceptance, while others, such as in situ phytoremediation, are being carefully examined because of their attractiveness as environmentally friendly, low-cost solutions to site clean-up. The success of phytoremediation strategies, however, hinges on the ability of selected plants, or plant communities, to effectively uptake, accumulate and tolerate targeted contaminants. Heavy metals, specifically cadmium (Cd), are not essential nutrients to plants. However, chemically similar zinc (Zn) is a micronutrient and is actively taken up by hyperaccumulators. For this reason, the mechanisms involved in uptake of Cd parallel those of Zn. Ideally, Cd would be allocated to the stem, leaf, and/or flower, where it becomes harvestable. Our modeling work simulates the uptake and the storage of Cd in a growing hyperaccumulator. After uptake, Cd is partitioned between adsorption to plant tissue and upward movement to leaves driven by transpiration. Uptake, adsorption and transport are also regulated by phytotoxicity. Simulations suggest that a young plant with small biomass can quickly reach phytotoxicity, which shuts down the normal operation of the plant. Conversely, mature plants on a mildly contaminated site, if harvested before the plants die due to phytotoxicity or natural cause, not only survive but may occasionally thrive. The immediate aim is to estimate the effectiveness and limitations of Cd uptake by hyperaccumulators. The eventual goal of this study is to expand the model in spatial and temporal scales, from individual plants to the community scale, and from one harvest interval to several generations. Understanding the interface between physical and biological processes, specifically the uptake and release of contaminants, provides scientists and engineers tools to assess whether phytoremediation is a reasonable strategy for a

  12. Uptake and translocation of plutonium in two plant species using hydroponics.

    PubMed

    Lee, J H; Hossner, L R; Attrep, M; Kung, K S

    2002-01-01

    This study presents determinations of the uptake and translocation of Pu in Indian mustard (Brassica juncea) and sunflower (Helianthus annuus) from Pu contaminated solution media. The initial activity levels of Pu were 18.50 and 37.00 Bq ml(-1), for Pu-nitrate [239Pu(NO3)4] and for Pu-citrate [239Pu(C6H5O7)+] in nutrient solution. Plutonium-diethylenetriaminepentaacetic acid (DTPA: [239Pu-C14H23O10N3] solution was prepared by adding 0, 5, 10, and 50 microg of DTPA ml(-1) with 239Pu(NO3)4 in nutrient solution. Concentration ratios (CR, Pu concentration in dry plant material/Pu concentration in nutrient solution) and transport indices (Tl, Pu content in the shoot/Pu content in the whole plant) were calculated to evaluate Pu uptake and translocation. All experiments were conducted in hydroponic solution in an environmental growth chamber. Plutonium concentration in the plant tissue was increased with increased Pu contamination. Plant tissue Pu concentration for Pu-nitrate and Pu-citrate application was not correlated and may be dependent on plant species. For plants receiving Pu-DTPA, the Pu concentration was increased in the shoots but decreased in the roots resulting in a negative correlation between the Pu concentrations in the plant shoots and roots. The Pu concentration in shoots of Indian mustard was increased for application rates up to 10 microg DTPA ml(-1) and up to 5 microg DTPA ml(-1) for sunflower. Similar trends were observed for the CR of plants compared to the Pu concentration in the shoots and roots, whereas the Tl was increased with increasing DTPA concentration. Plutonium in shoots of Indian mustard was up to 10 times higher than that in shoots of sunflower. The Pu concentration in the apparent free space (AFS) of plant root tissue of sunflower was more affected by concentration of DTPA than that of Indian mustard.

  13. Comparative Analyses of Plant Transcription Factor Databases

    PubMed Central

    Ramirez, Silvia R; Basu, Chhandak

    2009-01-01

    Transcription factors (TFs) are proteinaceous complex, which bind to the promoter regions in the DNA and affect transcription initiation. Plant TFs control gene expressions and genes control many physiological processes, which in turn trigger cascades of biochemical reactions in plant cells. The databases available for plant TFs are somewhat abundant but all convey different information and in different formats. Some of the publicly available plant TF databases may be narrow, while others are broad in scopes. For example, some of the best TF databases are ones that are very specific with just one plant species, but there are also other databases that contain a total of up to 20 different plant species. In this review plant TF databases ranging from a single species to many will be assessed and described. The comparative analyses of all the databases and their advantages and disadvantages are also discussed. PMID:19721806

  14. Phytotoxicity of salt and plant salt uptake: Modeling ecohydrological feedback mechanisms

    NASA Astrophysics Data System (ADS)

    Bauer-Gottwein, Peter; Rasmussen, Nikolaj F.; Feificova, Dagmar; Trapp, Stefan

    2008-04-01

    A new model of phytotoxicity of salt and plant salt uptake is presented and is coupled to an existing three-dimensional groundwater simulation model. The implementation of phytotoxicity and salt uptake relationships is based on experimental findings from willow trees grown in hydroponic solution. The data confirm an s-shaped phytotoxicity relationship as found in previous studies. Uptake data were explained assuming steady state salt concentration in plant roots, passive salt transport into the roots, and active enzymatic removal of salt from plant roots. On the one hand, transpiration strongly depends on groundwater salinity (phytotoxicity); on the other hand, transpiration significantly changes the groundwater salinity (uptake). This feedback loop generates interesting dynamic phenomena in hydrological systems that are dominated by transpiration and are influenced by significant salinity gradients. Generic simulations are performed for the Okavango island system and are shown to reproduce essential phenomena observed in nature.

  15. Iron isotope fractionation during Fe uptake and translocation in alpine plants.

    PubMed

    Kiczka, Mirjam; Wiederhold, Jan G; Kraemer, Stephan M; Bourdon, Bernard; Kretzschmar, Ruben

    2010-08-15

    The potential of stable Fe isotopes as a tracer for the biogeochemical Fe cycle depends on the understanding and quantification of the fractionation processes involved. Iron uptake and cycling by plants may influence Fe speciation in soils. Here, we determined the Fe isotopic composition of different plant parts including the complete root system of three alpine plant species (Oxyria digyna, Rumex scutatus, Agrostis gigantea) in a granitic glacier forefield, which allowed us, for the first time, to distinguish between uptake and in-plant fractionation processes. The overall range of fractionation was 4.5 per thousand in delta(56)Fe. Mass balance calculations demonstrated that fractionation toward lighter Fe isotopic composition occurred in two steps during uptake: (1) before active uptake, probably during mineral dissolution and (2) during selective uptake of Fe at the plasma membrane with an enrichment factor of -1.0 to -1.7 per thousand for all three species. Iron isotopes were further fractionated during remobilization from old into new plant tissue, which changed the isotopic composition of leaves and flowers over the season. This study demonstrates the potential of Fe isotopes as a new tool in plant nutrition studies but also reveals challenges for the future application of Fe isotope signatures in soil-plant environments.

  16. Boron uptake and accumulation by higher plants: A literature review: Final report

    SciTech Connect

    Sposito, G.; Calderone, S.J.

    1988-05-01

    This study provides a review of the literature on boron uptake and accumulation by higher plants, particularly trees. It addresses those aspects of the soil chemistry of boron that are most relevant to uptake by trees, then discusses the plant biochemistry of boron, its uptake and accumulation in plant tissue, and its phytotoxicity symptoms in plant species. The literature reviewed suggests that boron uptake is accomplished by a passive, massflow mechanism, as opposed to a metabolic process, with the most likely chemical form taken up being the neutral complex, H/sub 3/BO/sub 3/. The biochemical role of boron is not well understood, but evidence exists for its involvement with carbohydrate transformations and the control of growth-regulating compounds. Because of the mass-flow uptake mechanism, the distribution of boron in trees is connected intimately with the patterns of transpiration, which are species-dependent. Precise data on the effect of plant genotype on boron uptake, however, were not found in the published literature. The phytotoxicity symptoms of boron in trees also are species-dependent, although a consensus does exist as to the general nature of external symptoms and the basis of boron tolerance.

  17. Temporal variation in the nitrogen uptake competition between plant community and soil microbial community

    NASA Astrophysics Data System (ADS)

    Legay, N.; Lavorel, S.; Personeni, E.; Bataillé, M. P.; Robson, T. M.; Clément, J. C.

    2012-04-01

    1. Subalpine grasslands are characterized by important seasonal variations and like in others cold environments, the existence of seasonal variations of nitrogen (N) dynamics is strongly plausible. It has been shown that plants and microbes were in competition for nitrogen acquisition mainly during the growing season and particularly at plant biomass peak. During snowmelt, plants could benefit from a decrease in competition potential by microbes given a greater N uptake and freeze-thaw cycles restricting microbial growth. In managed grasslands, these probable interactions are furthermore influenced by recent changes in management, and associated modifications in plant and microbial communities. A previous isotope tracing experiment during the biomass peak suggested that in more intensely managed grasslands, plants exerted a greater control over N cycling than microorganisms, and that soil N availability was stimulated by a greater nitrogen uptake by plants and microbes allowing nutrients to be more readily returned to the soil. 2. A pulse of 15N was added to estimate if the dynamics of N uptake between plants and microbes observed at the biomass peak was applicable at snowmelt. We also asked if the modifications of N dynamics observed depend on management activities across four different grassland types representing decreasing management intensities, from formerly cultivated terraces, either mown or only lightly grazed to unterraced permanent grasslands, either mown or only very lightly grazed. 3. In all grasslands, N pools of aboveground plants were smaller in May than in July while root N pools were greater, and the intrinsic plant uptake was 2 at 5 times weaker in May. N microbial pools were higher in May that in July, while microbial N uptake was 10 to 100 times smaller during snowmelt than at the biomass peak. In spite of the fact that microbial N pools were still larger than the plant N pool, in terms of plants vs microbes competition for N, a microbe N

  18. Differential effect of metals/metalloids on the growth and element uptake of mesquite plants obtained from plants grown at a copper mine tailing and commercial seeds.

    PubMed

    Haque, N; Peralta-Videa, J R; Duarte-Gardea, M; Gardea-Torresdey, J L

    2009-12-01

    The selection of appropriate seeds is essential for the success of phytoremediation/restoration projects. In this research, the growth and elements uptake by the offspring of mesquite plants (Prosopis sp.) grown in a copper mine tailing (site seeds, SS) and plants derived from vendor seeds (VS) was investigated. Plants were grown in a modified Hoagland solution containing a mixture of Cu, Mo, Zn, As(III) and Cr(VI) at 0, 1, 5 and 10 mg L(-1) each. After one week, plants were harvested and the concentration of elements was determined by using ICP-OES. At 1 mg L(-1), plants originated from SS grew faster and longer than control plants (0 mg L(-1)); whereas plants grown from VS had opposite response. At 5 mg L(-1), 50% of the plants grown from VS did not survive, while plants grown from SS had no toxicity effects on growth. Finally, plants grown from VS did not survive at 10 mg L(-1) treatment, whilst 50% of the plants grown from SS survived. The ICP-OES data demonstrated that at 1 mg L(-1) the concentration of all elements in SS plants was significantly higher compared to control plants and VS plants. While at 5 mg L(-1), the shoots of SS plants had significantly more Cu, Mo, As, and Cr. The results suggest that SS could be a better source of plants intended to be used for phytoremediation of soil impacted with Cu, Mo, Zn, As and Cr.

  19. Mapping the metal uptake in plants from Jasper Ridge Biological Preserve using synchrotron micro-focused X-ray fluorescence spectroscopy

    SciTech Connect

    Lo, Allison

    2015-08-20

    Serpentine soil originates in the Earth’s mantle and contains high concentrations of potentially toxic transition metals. Although serpentine soil limits plant growth, endemic and adapted plants at Jasper Ridge Biological Preserve, located behind SLAC National Accelerator Laboratory, can tolerate these conditions. Serpentine soil and seeds belonging to native California and invasive plants were collected at Jasper Ridge. The seeds were grown hydroponically and on serpentine and potting soil to examine the uptake and distribution of ions in the roots and shoots using synchrotron micro-focused X-ray fluorescence spectroscopy. The results were used to determine differences between serpentine-tolerant plants. Rye grown on potting soil was enriched in Ni, Fe, Mn, and Cr compared to purple needlegrass grown on serpentine soil. Serpentine vegetation equally suppressed the uptake of Mn, Ni, and Fe in the roots and shoots. The uptake of Ca and Mg affected the uptake of other elements such as K, S, and P.

  20. Isotopic discrimination of zinc during root-uptake and cellular incorporation in higher plants

    NASA Astrophysics Data System (ADS)

    Mason, T. F.; Weiss, D. J.; Coles, B. J.; Horstwood, M.; Parrish, R. R.; Zhao, F. J.; Kirk, G. J.

    2003-04-01

    solutions, the depletion from root to shoot is significantly larger with the former (at -0.15 to -0.25 ppm pamu compared with -0.13 to -0.18 ppm pamu). For rice plants cultivated on zinc-sufficient soils, isotopic enrichment from soil to root (+0.25 ppm pamu), and depletion from root to shoot (-0.11 ppm pamu) were observed. However, under zinc-deficient conditions no significant isotopic shifts between soil, root and shoot were found. From these results it is apparent that two or more processes are controlling the zinc isotopic composition of the plant materials: one that favours isotopically heavy zinc (which we tentatively link to isotopic partitioning between species within the nutrient/soil-solutions), and one that favours isotopically light zinc (which is consistent with biologically-mediated uptake and cellular incorporation by plants). The lack of isotopic variability in the zinc-deficient soil system may indicate the predominance of a high-affinity zinc uptake pathway that is not isotopically selective.

  1. Nitrate Uptake into Barley (Hordeum vulgare) Plants 1

    PubMed Central

    Deane-Drummond, Celia E.; Glass, Anthony D. M.

    1982-01-01

    Evidence is presented that chlorate is an extremely good analog for nitrate during nitrate uptake by intact barley (Hordeum vulgare cv. Fergus) roots. The depletion of ClO3− or NO3− from uptake media over 2 to 6 hours by seedlings was found to be dependent on combined NO3− plus ClO3− concentrations, and total anion uptake was equivalent at different NO3−/ClO3− ratios. After loading barley seedlings with 36ClO3− for 6 hours, kinetic parameters were derived from the analysis of efflux of [36Cl] chlorate into unlabeled solution. On the basis of this analysis, the half times for exchange for the cytoplasmic and vacuolar phases were 17 minutes and 20 hours, respectively. Data pooled from a number of different experiments were used to calculate kinetic constants (Km and Vmax) for 36ClO3− influx into barley roots at different external ClO3−/NO3− ratios, using short (10 minutes) influx times. There appeared to be no discrimination by the root cells between ClO3− and NO3−. Lineweaver-Burk analysis of the interaction between nitrate and chlorate were characteristic of competitive inhibition at low nitrate concentrations (0-0.5 mm). At higher concentrations, in the range of >1 mm, similar interactions between these ions were evident. PMID:16662478

  2. Scaling plant nitrogen use and uptake efficiencies in response to nutrient addition in peatlands

    SciTech Connect

    Iversen, Colleen M; Bridgham, Scott; Kellogg, Laurie E.

    2010-01-01

    Nitrogen (N) is the primary growth-limiting nutrient in many terrestrial ecosystems, and therefore plant production per unit N taken up (i.e., N use efficiency, NUE) is a fundamentally important component of ecosystem function. Nitrogen use efficiency comprises two components: N productivity (AN, plant production per peak biomass N content) and the mean residence time of N in plant biomass (MRTN). We utilized a five-year fertilization experiment to examine the manner in which increases in N and phosphorus (P) availability affected plant NUE at multiple biological scales (i.e., from leaf to community level). We fertilized a natural gradient of nutrient-limited peatland ecosystems in the Upper Peninsula of Michigan, USA, with 6 g Nm2yr1, 2 g Pm2yr1, or a combination of N and P. Our objectives were to determine how changes in carbon and N allocation within a plant to leaf and woody tissue and changes in species composition within a community, both above- and belowground, would affect (1) NUE; (2) the adaptive trade-off between the components of NUE; (3) the efficiency with which plants acquired N from the soil (N uptake efficiency); and (4) plant community production per unit soil N availability (N response efficiency, NRE). As expected, N and P addition generally increased aboveground production and N uptake. In particular, P availability strongly affected the way in which plants took up and used N. Nitrogen use efficiency response to nutrient addition was not straightforward. Nitrogen use efficiency differed between leaf and woody tissue, among species, and across the ombrotrophic minerotrophic gradient because plants and communities were adapted to maximize either AN or MRTN, but not both concurrently. Increased N availability strongly decreased plant and community N uptake efficiency, while increased P availability increased N uptake efficiency, particularly in a nitrogen-fixing shrub. Nitrogen uptake efficiency was more important in controlling overall plant

  3. Scaling plant nitrogen use and uptake efficiencies in response to nutrient addition in peatlands.

    PubMed

    Iversen, Colleen M; Bridgham, Scott D; Kellogg, Laurie E

    2010-03-01

    Nitrogen (N) is the primary growth-limiting nutrient in many terrestrial ecosystems, and therefore plant production per unit N taken up (i.e., N use efficiency, NUE) is a fundamentally important component of ecosystem function. Nitrogen use efficiency comprises two components: N productivity (A(N), plant production per peak biomass N content) and the mean residence time of N in plant biomass (MRT(N)). We utilized a five-year fertilization experiment to examine the manner in which increases in N and phosphorus (P) availability affected plant NUE at multiple biological scales (i.e., from leaf to community level). We fertilized a natural gradient of nutrient-limited peatland ecosystems in the Upper Peninsula of Michigan, USA, with 6 g N x m(-2) x yr(-1), 2 g P x m(-2) x yr(-1), or a combination of N and P. Our objectives were to determine how changes in carbon and N allocation within a plant to leaf and woody tissue and changes in species composition within a community, both above- and belowground, would affect (1) NUE; (2) the adaptive trade-off between the components of NUE; (3) the efficiency with which plants acquired N from the soil (N uptake efficiency); and (4) plant community production per unit soil N availability (N response efficiency, NRE). As expected, N and P addition generally increased aboveground production and N uptake. In particular, P availability strongly affected the way in which plants took up and used N. Nitrogen use efficiency response to nutrient addition was not straightforward. Nitrogen use efficiency differed between leaf and woody tissue, among species, and across the ombrotrophic-minerotrophic gradient because plants and communities were adapted to maximize either A(N) or MRT(N), but not both concurrently. Increased N availability strongly decreased plant and community N uptake efficiency, while increased P availability increased N uptake efficiency, particularly in a nitrogen-fixing shrub. Nitrogen uptake efficiency was more important

  4. Native Plant Uptake Model for Radioactive Waste Disposal Areas at the Nevada Test Site

    SciTech Connect

    BROWN,THERESA J.; WIRTH,SHARON

    1999-09-01

    This report defines and defends the basic framework, methodology, and associated input parameters for modeling plant uptake of radionuclides for use in Performance Assessment (PA) activities of Radioactive Waste Management Sites (RWMS) at the Nevada Test Site (NTS). PAs are used to help determine whether waste disposal configurations meet applicable regulatory standards for the protection of human health, the environment, or both. Plants adapted to the arid climate of the NTS are able to rapidly capture infiltrating moisture. In addition to capturing soil moisture, plant roots absorb nutrients, minerals, and heavy metals, transporting them within the plant to the above-ground biomass. In this fashion, plant uptake affects the movement of radionuclides. The plant uptake model presented reflects rooting characteristics important to plant uptake, biomass turnover rates, and the ability of plants to uptake radionuclides from the soil. Parameters are provided for modeling plant uptake and estimating surface contaminant flux due to plant uptake under both current and potential future climate conditions with increased effective soil moisture. The term ''effective moisture'' is used throughout this report to indicate the soil moisture that is available to plants and is intended to be inclusive of all the variables that control soil moisture at a site (e.g., precipitation, temperature, soil texture, and soil chemistry). Effective moisture is a concept used to simplify a number of complex, interrelated soil processes for which there are too little data to model actual plant available moisture. The PA simulates both the flux of radionuclides across the land surface and the potential dose to humans from that flux. Surface flux is modeled here as the amount of soil contamination that is transferred from the soil by roots and incorporated into aboveground biomass. Movement of contaminants to the surface is the only transport mechanism evaluated with the model presented here

  5. Investigation of titanium dioxide nanoparticles toxicity and uptake by plants

    NASA Astrophysics Data System (ADS)

    Larue, C.; Khodja, H.; Herlin-Boime, N.; Brisset, F.; Flank, A. M.; Fayard, B.; Chaillou, S.; Carrière, M.

    2011-07-01

    Nanoparticles (NP) are introduced in a growing number of commercial products and their production may lead to their release in the environment. Plants may be a potential entry point for NP in the food chain. Up to now, results describing NP phytotoxical effects and plant accumulation are scarce and contradictory. To increase knowledge on titanium dioxide NP (TiO2-NPs) accumulation and impact on plants, we designed a study on three plant species, namely wheat (Triticum aestivum), oilseed rape (Brassica napus) and Arabidopsis thaliana. These plants were exposed in hydroponics to a panel of well-characterized TiO2-NPs, with diameters ranging from 12 to 140 nm, either anatase or rutile. Their accumulation in plant tissues is currently being assessed by complementary imaging techniques: scanning electron microscopy (SEM), transmission electron microscopy (TEM), micro-X-ray fluorescence (SR-μ-XRF) imaging and micro-particle induced X-ray emission (μ-PIXE) imaging. Moreover, the impact of TiO2-NP exposure on germination rate, root elongation, dry biomass and evapotranspiration is evaluated. Preliminary results are presented here, with data collected on wheat plants exposed to 12 nm and 25 nm anatase TiO2-NPs. These results show that TiO2-NPs are taken up by plants, and do not significantly alter their germination and root elongation. These results underline the necessity of deeper evaluation of nanoparticle ecotoxicity, and particularly on their interaction with plants.

  6. The influence of biological soil crusts on mineral uptake by associated vascular plants

    USGS Publications Warehouse

    Harper, K.T.; Belnap, Jayne

    2001-01-01

    Soil surfaces dominated by cyanobacteria and cyanolichens (such as Collema sp.) are widespread in deserts of the world. The influence of these biological soil crusts on the uptake of bioessential elements is reported for the first time for six seed plants of the deserts of Utah. This sample almost doubles the number of species for which the influence of biological soil crusts on mineral uptake of associated vascular plants is known. These new case studies, and others previously published, demonstrate that cyanobacterial or cyanobacteria- Collema crusts significantly alter uptake by plants of many bioessential elements. In studies now available, these crusts always increase the N content of associated seed plants. Uptake of Cu, K, Mg, and Zn is usually (>70% of reported cases) increased in the presence of the biological soil crusts. Soil crusts are generally negatively associated with Fe and P levels in associated seed plant tissue, while plant tissue levels of Ca, Mn, and Na are positively as often as negatively associated with the presence of soil crusts. Increases in bioessential elements in vascular plant tissue from biologically-crusted areas are greatest for short-lived herbs that are rooted primarily within the surface soil, the horizon most influenced by crustal organisms. The mineral content of a deeply rooted shrub (Coleogyne ramosissima) was less influenced by co-occurrence of biological soil crusts.

  7. Biotechnology of nutrient uptake and assimilation in plants.

    PubMed

    López-Arredondo, Damar L; Leyva-González, Marco A; Alatorre-Cobos, Fulgencio; Herrera-Estrella, Luis

    2013-01-01

    Plants require a complex balance of mineral nutrients to reproduce successfully. Because the availability of many of these nutrients in the soil is compromised by several factors, such as soil pH, cation presence, and microbial activity, crop plants depend directly on nutrients applied as fertilizers to achieve high yields. However, the excessive use of fertilizers is a major environmental concern due to nutrient leaching that causes water eutrophication and promotes toxic algae blooms. This situation generates the urgent need for crop plants with increased nutrient use efficiency and better-designed fertilization schemes. The plant biology revolution triggered by the development of efficient gene transfer systems for plant cells together with the more recent development of next-generation DNA and RNA sequencing and other omics platforms have advanced considerably our understanding on the molecular basis of plant nutrition and how plants respond to nutritional stress. To date, genes encoding sensors, transcription factors, transporters, and metabolic enzymes have been identified as potential candidates to improve nutrient use efficiency. In addition, the study of other genetic resources, such as bacteria and fungi, allows the identification of alternative mechanisms of nutrient assimilation, which are potentially applicable in plants. Although significant progress in this respect has been achieved by conventional breeding, in this review we focus on the biotechnological approaches reported to date aimed at boosting the use of the three most limiting nutrients in the majority of arable lands: nitrogen, phosphorus, and iron.

  8. Biotechnology of nutrient uptake and assimilation in plants.

    PubMed

    López-Arredondo, Damar L; Leyva-González, Marco A; Alatorre-Cobos, Fulgencio; Herrera-Estrella, Luis

    2013-01-01

    Plants require a complex balance of mineral nutrients to reproduce successfully. Because the availability of many of these nutrients in the soil is compromised by several factors, such as soil pH, cation presence, and microbial activity, crop plants depend directly on nutrients applied as fertilizers to achieve high yields. However, the excessive use of fertilizers is a major environmental concern due to nutrient leaching that causes water eutrophication and promotes toxic algae blooms. This situation generates the urgent need for crop plants with increased nutrient use efficiency and better-designed fertilization schemes. The plant biology revolution triggered by the development of efficient gene transfer systems for plant cells together with the more recent development of next-generation DNA and RNA sequencing and other omics platforms have advanced considerably our understanding on the molecular basis of plant nutrition and how plants respond to nutritional stress. To date, genes encoding sensors, transcription factors, transporters, and metabolic enzymes have been identified as potential candidates to improve nutrient use efficiency. In addition, the study of other genetic resources, such as bacteria and fungi, allows the identification of alternative mechanisms of nutrient assimilation, which are potentially applicable in plants. Although significant progress in this respect has been achieved by conventional breeding, in this review we focus on the biotechnological approaches reported to date aimed at boosting the use of the three most limiting nutrients in the majority of arable lands: nitrogen, phosphorus, and iron. PMID:24166442

  9. Effects of Plant Nutrients on Uptake of Radiostrontium by Thatcher Wheat.

    PubMed

    Lee, C C

    1961-06-16

    The effects of various dosages of ammonium dihydrogen phosphate, monocalcium phosphate, calcium chloride, and potassium chloride on the uptake of radiostrontium by Thatcher wheat grown in Saskatchewan Oxbow loam soil containing strontium-85 were studied. Monocalcium phosphate at a dose level of about 600 lb/acre of soil effected a statistically significant reduction of strontium-85 uptake in each of the four plant fractions of grain, chaff, stem, and leaf. At the very reasonable dosage of about 60 lb/acre, monocalcium phosphate gave a statistically significant reduction in strontium-85 uptake in the grain and chaff. PMID:17738872

  10. A mathematical model for investigating the effect of cluster roots on plant nutrient uptake

    NASA Astrophysics Data System (ADS)

    Zygalakis, K. C.; Roose, T.

    2012-04-01

    Cluster roots are thought to play an important role in mediating nutrient uptake by plants. In this paper we develop a mathematical model for the transport and uptake of phosphate by a single root. Phosphate is assumed to diffuse in the soil fluid phase and can also solubilised due to citrate exudation. Using multiple scale homogenisation techniques we derive an effective model that accounts for the cumulative effect of citrate exudation and phosphate uptake by cluster roots whilst still retaining all the necessary information about the microscale geometry and effects.

  11. Arsenic Uptake by Muskmelon (Cucumis melo) Plants from Contaminated Water.

    PubMed

    Hettick, Bryan E; Cañas-Carrell, Jaclyn E; Martin, Kirt; French, Amanda D; Klein, David M

    2016-09-01

    Arsenic is a carcinogenic element that occurs naturally in the environment. High levels of arsenic are found in water in some parts of the world, including Texas. The aims of this study were to determine the distribution of arsenic in muskmelon (Cucumis melo) plants accumulated from arsenic spiked water and to observe effects on plant biomass. Plants were grown and irrigated using water spiked with variable concentrations of arsenic. Inductively coupled plasma mass spectrometry was used to quantify arsenic in different parts of the plant and fruit. Under all conditions tested in this study, the highest concentrations of arsenic were found in the leaves, soil, and roots. Arsenic in the water had no significant effect on plant biomass. Fruits analyzed in this study had arsenic concentrations of 101 μg/kg or less. Consuming these fruits would result in less arsenic exposure than drinking water at recommended levels. PMID:27460822

  12. Phytome: a platform for plant comparative genomics.

    PubMed

    Hartmann, Stefanie; Lu, Dihui; Phillips, Jason; Vision, Todd J

    2006-01-01

    Phytome is an online comparative genomics resource that can be applied to functional plant genomics, molecular breeding and evolutionary studies. It contains predicted protein sequences, protein family assignments, multiple sequence alignments, phylogenies and functional annotations for proteins from a large, phylogenetically diverse set of plant taxa. Phytome serves as a glue between disparate plant gene databases both by identifying the evolutionary relationships among orthologous and paralogous protein sequences from different species and by enabling cross-references between different versions of the same gene curated independently by different database groups. The web interface enables sophisticated queries on lineage-specific patterns of gene/protein family proliferation and loss. This rich dataset is serving as a platform for the unification of sequence-anchored comparative maps across taxonomic families of plants. The Phytome web interface can be accessed at the following URL: http://www.phytome.org. Batch homology searches and bulk downloads are available upon free registration.

  13. Nitrogen deposition and prey nitrogen uptake control the nutrition of the carnivorous plant Drosera rotundifolia.

    PubMed

    Millett, J; Foot, G W; Svensson, B M

    2015-04-15

    Nitrogen (N) deposition has important negative impacts on natural and semi-natural ecosystems, impacting on biotic interactions across trophic levels. Low-nutrient systems are particularly sensitive to changes in N inputs and are therefore more vulnerable to N deposition. Carnivorous plants are often part of these ecosystems partly because of the additional nutrients obtained from prey. We studied the impact of N deposition on the nutrition of the carnivorous plant Drosera rotundifolia growing on 16 ombrotrophic bogs across Europe. We measured tissue N, phosphorus (P) and potassium (K) concentrations and prey and root N uptake using a natural abundance stable isotope approach. Our aim was to test the impact of N deposition on D. rotundifolia prey and root N uptake, and nutrient stoichiometry. D. rotundifolia root N uptake was strongly affected by N deposition, possibly resulting in reduced N limitation. The contribution of prey N to the N contained in D. rotundifolia ranged from 20 to 60%. N deposition reduced the maximum amount of N derived from prey, but this varied below this maximum. D. rotundifolia tissue N concentrations were a product of both root N availability and prey N uptake. Increased prey N uptake was correlated with increased tissue P concentrations indicating uptake of P from prey. N deposition therefore reduced the strength of a carnivorous plant-prey interaction, resulting in a reduction in nutrient transfer between trophic levels. We suggest that N deposition has a negative impact on D. rotundifolia and that responses to N deposition might be strongly site specific.

  14. Comparative analysis of twelve Dothideomycete plant pathogens

    SciTech Connect

    Ohm, Robin; Aerts, Andrea; Salamov, Asaf; Goodwin, Stephen B.; Grigoriev, Igor

    2011-03-11

    The Dothideomycetes are one of the largest and most diverse groups of fungi. Many are plant pathogens and pose a serious threat to agricultural crops grown for biofuel, food or feed. Most Dothideomycetes have only a single host and related Dothideomycete species can have very diverse host plants. Twelve Dothideomycete genomes have currently been sequenced by the Joint Genome Institute and other sequencing centers. They can be accessed via Mycocosm which has tools for comparative analysis

  15. Environmental behavior of explosives in groundwater from the Milan Army Ammunition Plant in aquatic and wetland plant treatments. Uptake and fate of TNT and RDX in plants.

    PubMed

    Best, E P; Sprecher, S L; Larson, S L; Fredrickson, H L; Bader, D F

    1999-11-01

    Uptake and fate of TNT and RDX by three aquatic and four wetland plants were studied using hydroponic, batch, incubations in explosives-contaminated groundwater amended with [U-14C]-TNT or [U-14C]-RDX in the laboratory. Substrates in which the plants were rooted were also tested. Plants and substrates were collected from a small-scale wetland constructed for explosives removal, and groundwater originated from a local aquifer at the Milan Army Ammunition Plant. This study demonstrated rapid uptake of [U-14C]-TNT derived 14C, concentration at the uptake sites and limited transport in all plants. Per unit of mass, uptake was higher in submersed than in emergent species. Biotransformation of TNT had occurred in all plant treatments after 7-day incubation in 1.6 to 3.4 mg TNT L-i, with labeled amino-dinitrotoluenes (ADNTs), three unidentified compounds unique for plants, and mostly polar products as results. Biotransformation occurred also in the substrates, yielding labeled ADNT, one unidentified compound unique for substrates, and polar products. TNT was not recovered by HPLC in plants and substrates after incubation. Uptake of [U-14C]-RDX derived 14C in plants was slower than that of TNT, transport was substantial, and concentration occurred at sites where new plant material was synthesized. As for TNT, uptake per unit of mass was higher in submersed than in emergent species. Biotransformation of RDX had occurred in all plant treatments after 13-day incubation in 1.5 mg RDX L-1, with one unidentified compound unique for plants, and mostly polar products as results. Biotransformation had occurred also in the substrates, but to a far lower extent than in plants. Substrates and plants had one unidentified 14C-RDX metabolite in common. HPLC analysis confirmed the presence of RDX in most plants and in three out of four substrates at the end of the incubation period.

  16. Estimating plant water uptake source depths with optimized stable water isotope labeling

    NASA Astrophysics Data System (ADS)

    Seeger, Stefan; Weiler, Markus

    2016-04-01

    Depth profiles of pore water stable isotopes in soils in conjunction with measurements of stable water isotopes (SWI) in plant transpiration allow the estimation of the contributions of different soil depths to plant water uptake (PWU).
 However, SWI depth profiles that result from the variations of SWI in natural precipitation may lead to highly ambiguous results, i.e. the same SWI signature in transpiration could result from different PWU patterns or SWI depth profiles. The aim of this study was to find an optimal stable water isotope depth profile to estimate plant water uptake patterns and to compare different PWU source depth estimation methods. We used a new soil water transport model including fractionation effects of SWI and exchange between the vapor and liquid phase to simulate different irrigation scenarios. Different amounts of water with differing SWI signatures (glacier melt water, summer precipitation water, deuterated water) were applied in order to obtain a wide variety of SWI depth profiles. Based on these simulated SWI depth profiles and a set of hypothetical PWU patterns, the theoretical SWI signatures of the respective plant transpiration were computed. In the next step, two methods - Bayesian isotope mixing models (BIMs) and optimization of a parametric distribution function (beta function) - were used to estimate the PWU patterns from the different SWI depth profiles and their respective SWI signatures in the resulting transpiration. Eventually, the estimated and computed profiles were compared to find the best SWI depth profile and the best method. The results showed, that compared to naturally occurring SWI depth profiles, the application of multiple, in terms of SWI, distinct labeling pulses greatly improves the possible spatial resolution and at the same time reduces the uncertainty of PWU estimates.
 For the PWU patterns which were assumed for this study, PWU pattern estimates based on an optimized parametric distribution function

  17. Seasonal nutrient uptake of plant biomass in a constructed wetland treating piggery wastewater effluent.

    PubMed

    Lee, S Y; Maniquiz, M C; Choi, J Y; Jeong, S M; Kim, L H

    2013-01-01

    The surface-flow constructed wetland (CW) located in Nonsan City, South Korea, and constructed as the final stage of a piggery wastewater treatment plant that aims to treat high nutrient content effluent during dry days and stormwater runoff during wet days was monitored from October 2008 to November 2011. This research investigated the seasonal nutrient uptake of plant biomass in the CW and nutrient concentration changes in each treatment region under monsoon and temperate climate conditions. Results showed that the mean total nitrogen removal during summer (June to August) was higher by 13% than in spring (March to May), while total phosphorus removal was higher by 22% in fall (September to November) than in winter (December to February). All plants in the CW reached their maximum biomass coverage and weight in summer and minimum growth in winter. The highest N and P content in plants occurred in September with 583.2 g/m(2) and August with 62.0 g/m(2), respectively. Based on the results, it is recommended that the harvesting of plants should be conducted during the time of the peak nutrient uptake and before the plants release the nutrient content back to the CW. The dependence of nutrient removal efficiency on plants is not so significant. In order to increase the nutrient removal rate by plant uptake, it is suggested that the treatment regions in the CW be covered by plants.

  18. Zinc and copper uptake by plants under two transpiration rates. Part II. Buckwheat (Fagopyrum esculentum L.).

    PubMed

    Tani, F H; Barrington, S

    2005-12-01

    To evaluate the environmental risks of irrigating crops with treated wastewater, a study was undertaken to quantify heavy metal uptake by 4-week old buckwheat (Fagopyrum esculentum L.) plants during 18 days of irrigation with 8 different Cu and Zn solutions under two transpiration rates (TR). At 4 weeks, potted buckwheat plants were transferred into one of the two growth chambers, offering either a high or low vapour pressure deficit (VDP) for, respectively, a high or low TR. Triplicate pots received one of the 8 irrigation treatments containing one of two Zn levels (0 and 25 mg/L) combined with one of four Cu levels (0, 5, 10 and 15 mg/L). Daily TR were measured by weighing the evapo-transpired water lost from the planted pot, less was the evaporation loss measured from triplicate non-planted pots. After 0, 6, 12 and 18 days of treatment, the stems and leaves of three randomly selected plants were harvested and after 18 days, the roots were harvested to determine Cu and Zn uptake. The treatments did not affect TR in terms of dry plant mass, indicating the absence of toxic effects. Irrigating with Zn, without Cu, increased dry biomass production, whereas the lowest biomass occurred with 15 and 30 mg/L of Cu with and without 25 mg/L of Zn, respectively, because higher applications of heavy metal significantly reduced soil pH. Plant Cu and Zn uptake increased with TR. With higher levels of Cu, Zn uptake by buckwheat was significantly reduced, while Zn had a slight but non-significant impact on Cu uptake. Previously and in a study exposing wheat plants to the same conditions, Cu significantly increased Zn uptake, while Zn had a slight but insignificant negative effect on Cu uptake. The buckwheat roots contained the greatest levels of Cu and Zn, indicating their role in moderating heavy metal uptake. Also, both Cu and Zn had a synergetic effect on each other in terms of root levels, and a similar observation was made in the earlier similar experiment using wheat plants

  19. Toxicity, Uptake, and Translocation of Engineered Nanomaterials in Vascular plants.

    PubMed

    Miralles, Pola; Church, Tamara L; Harris, Andrew T

    2012-09-01

    To exploit the promised benefits of engineered nanomaterials, it is necessary to improve our knowledge of their bioavailability and toxicity. The interactions between engineered nanomaterials and vascular plants are of particular concern, as plants closely interact with soil, water, and the atmosphere, and constitute one of the main routes of exposure for higher species, i.e. accumulation through the food chain. A review of the current literature shows contradictory evidence on the phytotoxicity of engineered nanomaterials. The mechanisms by which engineered nanomaterials penetrate plants are not well understood, and further research on their interactions with vascular plants is required to enable the field of phytotoxicology to keep pace with that of nanotechnology, the rapid evolution of which constantly produces new materials and applications that accelerate the environmental release of nanomaterials.

  20. Uptake of polycyclic aromatic hydrocarbons by maize plants.

    PubMed

    Lin, H; Tao, S; Zuo, Q; Coveney, R M

    2007-07-01

    Roots and above-ground parts (tops) of maize plants, comprising cuticles, leaves and stems, have been exposed separately to polycyclic aromatic hydrocarbons (PAHs) by means of air-tight bicameral exposure devices. Maize roots and tops of plants directly accumulate PAHs from aqueous solutions and from air in proportion to exposure levels. Root and leaf concentration factors (log RCF and log LCF) are log-linear functions of log-based octanol-water partition coefficient (log Kow) and log-based octanol-air partition coefficient (log Koa). The PAHs' concentrations among cuticles, leaves and stems display good correlations with each other. PAH concentrations in each part of the plant tested correlated positively with atmospheric PAHs' concentrations. Comparisons between PAHs' concentrations of root epidermis and root tissue showed similar correlations. Bulk concentrations of contaminants in various plant tissues differed greatly, but these differences disappeared after normalization to lipid contents suggesting lipid-based partitioning of PAHs among maize tissues.

  1. Growth, nitrogen uptake and flow in maize plants affected by root growth restriction.

    PubMed

    Xu, Liangzheng; Niu, Junfang; Li, Chunjian; Zhang, Fusuo

    2009-07-01

    The objective of the present study was to investigate the influence of a reduced maize root-system size on root growth and nitrogen (N) uptake and flow within plants. Restriction of shoot-borne root growth caused a strong decrease in the absorption of root: shoot dry weight ratio and a reduction in shoot growth. On the other hand, compensatory growth and an increased N uptake rate in the remaining roots were observed. Despite the limited long-distance transport pathway in the mesocotyl with restriction of shoot-borne root growth, N cycling within these plants was higher than those in control plants, implying that xylem and phloem flow velocities via the mesocotyl were considerably higher than in plants with an intact root system. The removal of the seminal roots in addition to restricting shoot-borne root development did not affect whole plant growth and N uptake, except for the stronger compensatory growth of the primary roots. Our results suggest that an adequate N supply to maize plant is maintained by compensatory growth of the remaining roots, increased N uptake rate and flow velocities within the xylem and phloem via the mesocotyl, and reduction in the shoot growth rate.

  2. [Research advances in uptake, translocation, accumulation and detoxification of Pb in plants].

    PubMed

    Duan, De-Chao; Yu, Ming-Ge; Shi, Ji-Yan

    2014-01-01

    Contamination of soils by lead (Pb) is of widespread occurrence because of the industrialization, urbanization, mining, and many other anthropogenic activities. It is urgent and necessary for scientists to uncover the mechanisms of uptake, translocation, accumulation and detoxification of Pb in plants for the following two reasons. First, it helps target and regulate the key process of Pb uptake by crops and vegetables and minimize the threat of Pb introduction to the food chain. Second, it helps cultivate Pb hyperaccumulating plants that can absorb and sequester excessive amounts from contaminated soils in their biomass without incurring damage to basic metabolic functions. The purpose of this review was to summarize the research advances in uptake, translocation and accumulation of Pb in plants and address the mechanisms by which plants or plant systems detoxify Pb. The further researches on the foliar uptake, the interactions between soil components and plant cell wall, as well as the integrated technologies for phytoremediation of Pb-contaminated soils were prospected.

  3. Uptake of trichloroethylene by hybrid poplar trees grown hydroponically in flow-through plant growth chambers

    SciTech Connect

    Orchard, B.J.; Doucette, W.J.; Chard, J.K.; Bugbee, B.

    2000-04-01

    Phytoremediation in being promoted as a cost-effective treatment option for shallow groundwater and soils contaminated with trichloroethylene (TCE). However, its effectiveness is difficult to assess due to contradictory reports regarding the magnitude of plant uptake and phytovolatilization. Experimental artifacts and plants stress, resulting from the use of static or low-flow plants growth laboratory systems, may account for part of the discrepancy. High exposure concentrations and short durations may also cause artifacts in laboratory studies. A dual-chamber plant growth system designed to minimize experimental artifacts was used to determine the uptake of [{sup 14}C] TCE by hydroponically grown hybrid poplar as a function of plant stress, exposure concentration, and exposure duration. The [{sup 14}]TCE recoveries ranged from 92 to 101% in 11 dosed chambers. Trichloroethylene mass equivalent concentrations in the shoot tissue were dependent on the amount of water transpired and the exposure concentration. Root-zone oxygen status die not significantly impact TCE uptake. Transpiration stream concentration factors (TSCFs) determined in these studies were independent of exposure duration and are much lower than those previously reported and predicted. The role of TSCF and other factors in estimating the significance of plant uptake in the phytoremediation of TCE-contaminated groundwater is discussed.

  4. Field dissipation and plant uptake of benzotriazole ultraviolet stabilizers in biosolid-amended soils.

    PubMed

    Lai, Hua-Jie; Ying, Guang-Guo; Ma, Yi-Bing; Chen, Zhi-Feng; Chen, Feng; Liu, You-Sheng

    2014-03-01

    Benzotriazole ultraviolet stabilizers (BUVSs) have been commonly used in industrial and household product formulations, and have been detected in biosolids from wastewater treatment plants. However, little is known about their occurrence and dissipation behavior in the soil environment associated with biosolid application. This study investigated the occurrence and dissipation of five typical BUVSs (UV-326, UV-327, UV-328, UV-329 and UV-P) in biosolid-amended soils, and the uptake of these biocides by plants. The field trial includes two treatment groups: old groups with biosolid application at rates of 5, 10, 20 and 40 t ha(-1) every year within 5 years, and new groups with only one biosolid application. The results showed that the five BUVSs could be detected in most biosolid-amended soils at a few to tens of ng g(-1) levels, but not detected in the control soils. These chemicals were not found in the crop plants collected from the trial plots. Moreover, high biosolid application rates and repeated biosolid applications resulted in high accumulation of these BUVSs in soil. During one year monitoring, the five BUVSs were significantly dissipated in the biosolid-amended soils with their half-lives ranging from 79 to 223 days, which were comparable with the modeling results. The results from this study demonstrated the persistence of BUVSs in soil environments with quite slow dissipation rates. PMID:24452637

  5. Comparing Measures of Fine Root Uptake by Mature Trees: Applications for Determining the Potential Impacts of Climate Change-Induced Soil Freezing on Nutrient Uptake by Sugar Maple and Red Spruce

    NASA Astrophysics Data System (ADS)

    Socci, A. M.; Templer, P. H.

    2008-12-01

    Forests of the northeastern United States are predicted to experience a decrease in the depth and duration of snow pack due to global climate change. Even when coupled with milder winter temperatures, the loss of forest floor insulation can increase soil freezing depth and duration during the winter months. Soil frost leads to increased root mortality and soil nitrate leaching in stands dominated by sugar maple, a dominant tree species of northern hardwood forests. Greater nitrogen losses may be due to reduced nitrogen uptake by plant roots. As nitrogen is an essential nutrient for trees, changes in nitrogen uptake by fine roots may have implications for forest productivity and carbon storage. To test the impact of increased soil freezing on fine root uptake of nutrients from the soil, we established a snow removal experiment in sugar maple and red spruce dominated forests at the Hubbard Brook Experimental Forest in New Hampshire, USA. In the first year of this study, we measured uptake of ammonium (NH4+) and nitrate (NO3-) by fine roots of sugar maple and red spruce during the early (May), peak (July), and late (September) growing season. Individuals of sugar maple were located on paired plots (n=4 reference and snow-removal plots, n= 3 individuals per plot) and sampled for rates of nutrient uptake prior to snow removal. We used both an in situ intact root uptake measurement known as "nitrogen depletion", and an ex situ excised root measurement. Individuals of red spruce (n=1 reference and snow-removal plot, n=3 individuals per plot) were sampled after one winter of snow removal, also using one in situ and one ex situ method of measuring fine root uptake of nutrients. Individuals of sugar maple took up significantly more NH4+ than NO3- during the early growing season, but there was no significant difference between forms of nitrogen taken up during the peak growing season. Individuals of red spruce took up significantly more NH4+ than NO3- during both the early

  6. Effect of selenite and selenate on plant uptake of cadmium by maize (zea mays)

    SciTech Connect

    Shanker, K.; Mishra, S.; Srivastava, S.

    1996-03-01

    Selenium has been reported to confer tolerance to toxicity of heavy metals including cadmium, a highly toxic and non essential heavy metal, which enters the food chain via plant uptake from soils. Selenium reduces availability of cadmium to plants along with other aspects of its toxicokinetics. When plants are supplied with selenite, selenium concentrations in the xylem exudate are lower than selenate. Most of the selenate was transported as selenate and unidentified organic Se compounds. In contrast, Se distribution among various Se fractions within plants does not depend significantly on whether selenite or selenate was used. Selenium has a strong tendency to form complexes with heavy metals like Cd, Hg, Ag and Tl. It has been suggested that the protective effects of selenium are due to the formation of non toxic Se-metal complexes, although the mechanism by which this protective effect is exerted remains unclear. Studies on the effect of selenium (selenite) and cadmium additions to the soil on their concentrations in lettuce and wheat has indicated the role of selenite in reduction of cadmium uptake. The cletoxifying effect of sodium selenite on cadmium ion in the freshwater fish Potyacuthus cupanus has been reported. The discovery that an element like selenium counteracts the toxicity, chemical carcinogenesis and reduces the plant uptake of other toxic metals, highlights the possibility of existence of a Se-metal interaction mechanism in soil plant systems. The uptake and translocation of root-absorbed chromium supplied through irrigation in the trivalent and hexavalant states in various parts of the onion plant (Allium cepa) grown in soil and sand culture has been recently reported by us. In continuation of that, this preliminary report describes the effect of selenite and selenate pretreatment on the uptake of cadmium in the maize plant (Zea mays).

  7. The uptake of TcO-4 by plants: A mathematical description

    SciTech Connect

    Van Loon, L.R.; Desmet, G.M.; Cremers, A. )

    1989-08-01

    A model describing the uptake of TcO-4 by spinach plants was developed. The equation relates both plant and soil parameters (e.g., growth, metabolism, concentration of TcO-4 and composition of the growth medium) to the concentration of Tc in the shoot of the plant. As the soil solution is the medium from which plants obtain nutrients and non-nutrients, the modeling parameters have been obtained from uptake experiments using nutrient solutions (= simulated soil solutions) as the growth medium. Two important model assumptions are: (1) that an equilibrium exists between TcO-4 in the plant and the growth medium and (2) that the leaf TcO-4 metabolism is a pseudofirst order reaction occurring in a non-constant volume.

  8. Mesoscopic aspects of root water uptake modeling - Hydraulic resistances and root geometry interpretations in plant transpiration analysis

    NASA Astrophysics Data System (ADS)

    Vogel, Tomas; Votrubova, Jana; Dusek, Jaromir; Dohnal, Michal

    2016-02-01

    In the context of soil water flow modeling, root water uptake is often evaluated based on water potential difference between the soil and the plant (the water potential gradient approach). Root water uptake rate is modulated by hydraulic resistance of both the root itself, and the soil in the root vicinity. The soil hydraulic resistance is a function of actual soil water content and can be assessed assuming radial axisymmetric water flow toward a single root (at the mesoscopic scale). In the present study, three approximate solutions of mesoscopic root water uptake - finite difference approximation, steady-state solution, and steady-rate solution - are examined regarding their ability to capture the pressure head variations in the root vicinity. Insignificance of their differences when implemented in the macroscopic soil water flow model is demonstrated using the critical root water uptake concept. Subsequently, macroscopic simulations of coupled soil water flow and root water uptake are presented for a forest site under temperate humid climate. Predicted soil water pressure heads and actual transpiration rates are compared with observed data. Scenario simulations illustrate uncertainties associated with estimates of root geometrical and hydraulic properties. Regarding the actual transpiration prediction, the correct characterization of active root system geometry and hydraulic properties seems far more important than the choice of a particular mesoscopic model.

  9. Uptake of 137Cs and 90Sr in rice plants.

    PubMed

    Leung, J K C; Shang, Z R

    2003-02-01

    In order to study the transfer of water-borne 137Cs and 90Sr into rice plants, pot experiments were done by growing rice plants on soils taken from rice beds near two nuclear power plants: Qinshan Nuclear Power Plant and Daya Bay Nuclear Power Plant in China. The vertical migration of 137Cs and 90Sr in the soil samples was studied, and results show that almost all the contaminants were retained in the top 1 cm of soil with at most a few percent down to 3 cm of soil. The areal transfer factors of 137Cs and 90Sr were studied by adding various activity concentrations of the two radionuclides to the irrigation water and then measuring the activity concentration in the various rice tissues. The areal transfer factors were also analyzed for their dependence on soil characteristics, time and duration of the contamination. The areal transfer factors obtained in this study refer to the absorption of the fallout nuclides deposited in the irrigation water in a rice field as opposed to other studies that deal with uniform activity concentration in the soils.

  10. Simultaneous Simulations of Uptake in Plants and Leaching to Groundwater of Cadmium and Lead for Arable Land Amended with Compost or Farmyard Manure

    PubMed Central

    Legind, Charlotte N.; Rein, Arno; Serre, Jeanne; Brochier, Violaine; Haudin, Claire-Sophie; Cambier, Philippe; Houot, Sabine; Trapp, Stefan

    2012-01-01

    The water budget of soil, the uptake in plants and the leaching to groundwater of cadmium (Cd) and lead (Pb) were simulated simultaneously using a physiological plant uptake model and a tipping buckets water and solute transport model for soil. Simulations were compared to results from a ten-year experimental field study, where four organic amendments were applied every second year. Predicted concentrations slightly decreased (Cd) or stagnated (Pb) in control soils, but increased in amended soils by about 10% (Cd) and 6% to 18% (Pb). Estimated plant uptake was lower in amended plots, due to an increase of Kd (dry soil to water partition coefficient). Predicted concentrations in plants were close to measured levels in plant residues (straw), but higher than measured concentrations in grains. Initially, Pb was mainly predicted to deposit from air into plants (82% in 1998); the next years, uptake from soil became dominating (30% from air in 2006), because of decreasing levels in air. For Cd, predicted uptake from air into plants was negligible (1–5%). PMID:23056555

  11. Plant uptake and transport of /sup 241/Am

    SciTech Connect

    Wallace, A.; Romney, E.M.; Mueller, R.T. Sr.; soufi, S.M.

    1981-07-01

    We conducted several experiments with /sup 241/Am to obtain a more complete understanding of how this transuranium element is absorbed and transported in plants. In a plant species (Tamarix pentandra Pall.) that has salt glands in the leaves excreting NaCl and other ions, /sup 241/Am was not pumped through these glands. Cyanide, which forms complexes with any metals, when applied to a calcareous soil, greatly increased the transport of /sup 241/Am into stems and leaves of bush bean plants. Radioactive cyanide (/sup 14/C) was also transported to leaves and stems. When radish was grown in both calcareous and noncalcareous soils, /sup 241/Am appeared to be fixed on the peel so firmly that it was resistant to removal by HNO/sub 3/ washing. The chelating agent DTPA induced increased transport of /sup 241/Am to leaves and into the fleshy roots of the radish.

  12. Uptake and physiological response of crop plants irrigated with water containing RDX and TNT

    SciTech Connect

    Simini, M.; Checkai, R.T.

    1995-12-31

    Regulatory agencies have expressed concern about possible bioconcentration of TNT (2,4,6-trinitrotoluene) and RDX (cyclotrimethylenetrinitramine) in food and forage crops irrigated with contaminated groundwater. Field and home-garden crops grown in site-collected soil were irrigated with water containing RDX and TNT to simulate field conditions at Cornhusker Army Ammunition Plant (CAAP), Nebraska. Pots were watered in an environment-controlled greenhouse to field capacity throughout the life-cycle of each crop with 2, 20, and 100 ppb RDX; 2, 100, and 800 ppb TNT; 100 ppb RDX + 800 ppb TNT; or uncontaminated water in response to evapo-transpirative demand. Uptake of RDX in lettuce leaves, corn stover, and alfalfa shoots was positively correlated with treatment level, however, concentrations of RDX in these crops were generally equal to or below soil loading concentrations. RDX was not significantly (p = 0.05) taken up into tomato fruit, bush bean seeds and pods, radish roots, and soybean seeds. TNT was not significantly take up into tissues of any of the crops analyzed in this study. Yield and biomass of tomato fruit, bush bean fruit, corn stover, and soybean seeds were significantly (p = 0.05) less when irrigated with the RDX + TNT treatment compared to controls. Lettuce leaf, radish root, and alfalfa shoot yield and biomass were unaffected by treatment level. For site-specific criteria used in this study, RDX and TNT did not bioconcentrate in edible plant tissues. This is the first controlled study to investigate uptake of RDX and TNT in crops irrigated with water containing explosives concentrations commonly found in contaminated groundwater.

  13. Plant uptake of cations under nutrient limitation: An environmental tracer study using Ca/Sr and K/Rb ratios

    NASA Astrophysics Data System (ADS)

    Shi, Z.; Keller, C. K.; Stacks, D.; Grant, M.; Harsh, J. B.; Letourneau, M.; Gill, R. A.; Balogh-Brunstad, Z.; Thomashow, L.; Dohnalkova, A.

    2012-12-01

    Vascular plant growth builds soils and ecosystem nutrient capital by sequestering and partitioning atmospheric CO2 into organic matter and continental runoff and driving terrestrial water and energy balances. Plant root-system functions, e.g. nutrient mobilization and uptake, are altered by environmental stress. However, the stress-response relationships are poorly understood. Chemical tracers have potential for assessing contributions of nutrients from various nutrient pools. Our objective is to quantitatively study how varying degrees of nutrient limitation (and corresponding needs to extract base cations from mineral sources) influence Ca and K uptake functions in a plant-root-mineral system. We are studying plant-driven mineral weathering in column experiments with red pine (Pinus resinosa) seedlings. The columns contain quartz sand amended with anorthite and biotite that constitute the sole mineral sources of Ca and K. These minerals also contain known amounts of Sr and Rb, which exhibit chemical behavior similar to Ca and K, respectively. The solution source of Ca and K was varied by adding 0% (no dissolved Ca and K), 10%, 30%, or 100% of a full strength Ca and K nutrient solution through irrigation water in which both Sr and Rb concentrations were negligible. Selected columns were destructively sampled at 3, 6 and 9 months to harvest biomass and measure plant uptake of cations. We used Ca/Sr and K/Rb ratio results to estimate the contributions of Ca and K from mineral and solution sources. For the 0% nutrient treatment, the Ca/Sr and K/Rb ratios in total biomass at 3 months, compared with those in the mineral phases, suggested preferential uptake of Ca and K over Sr and Rb, respectively, and allowed us to determine uptake discrimination factors for both cations. The K/Rb ratios in total biomass increased with greater K availability in the solution source, as expected, but Ca/Sr ratios did not show any dependence on Ca availability in the solution source

  14. Cyclic variations in nitrogen uptake rate of soybean plants: ammonium as a nitrogen source

    NASA Technical Reports Server (NTRS)

    Henry, L. T.; Raper, C. D. Jr

    1989-01-01

    When NO3- is the sole nitrogen source in flowing solution culture, the net rate of nitrogen uptake by nonnodulated soybean (Glycine max L. Merr. cv Ransom) plants cycles between maxima and minima with a periodicity of oscillation that corresponds with the interval of leaf emergence. Since soybean plants accumulate similar quantities of nitrogen when either NH4+ or NO3- is the sole source in solution culture controlled at pH 6.0, an experiment was conducted to determine if the oscillations in net rate of nitrogen uptake also occur when NH4+ is the nitrogen source. During a 21-day period of vegetative development, net uptake of NH4+ was measured daily by ion chromatography as depletion of NH4+ from a replenished nutrient solution containing 1.0 millimolar NH4+. The net rate of NH4+ uptake oscillated with a periodicity that was similar to the interval of leaf emergence. Instances of negative net rates of uptake indicate that the transition between maxima and minima involved changes in influx and efflux components of net NH4+ uptake.

  15. Gramene: a growing plant comparative genomics resource

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Gramene (www.gramene.org) is a curated genetic, genomic and comparative genome analysis resource for the major crop species, such as rice, maize, wheat and many other plant (mainly grass) species. Gramene is an open-source project, with all data and software freely downloadable through the ftp site ...

  16. Gramene 2013: Comparative plant genomics resources

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Gramene (http://www.gramene.org) is a curated online resource for comparative functional genomics in crops and model plant species, currently hosting 27 fully and 10 partially sequenced reference genomes in its build number 38. Its strength derives from the application of a phylogenetic framework fo...

  17. Investigating the Toxicity, Uptake, Nanoparticle Formation and Genetic Response of Plants to Gold

    PubMed Central

    Taylor, Andrew F.; Rylott, Elizabeth L.; Anderson, Christopher W. N.; Bruce, Neil C.

    2014-01-01

    We have studied the physiological and genetic responses of Arabidopsis thaliana L. (Arabidopsis) to gold. The root lengths of Arabidopsis seedlings grown on nutrient agar plates containing 100 mg/L gold were reduced by 75%. Oxidized gold was subsequently found in roots and shoots of these plants, but gold nanoparticles (reduced gold) were only observed in the root tissues. We used a microarray-based study to monitor the expression of candidate genes involved in metal uptake and transport in Arabidopsis upon gold exposure. There was up-regulation of genes involved in plant stress response such as glutathione transferases, cytochromes P450, glucosyl transferases and peroxidases. In parallel, our data show the significant down-regulation of a discreet number of genes encoding proteins involved in the transport of copper, cadmium, iron and nickel ions, along with aquaporins, which bind to gold. We used Medicago sativa L. (alfalfa) to study nanoparticle uptake from hydroponic culture using ionic gold as a non-nanoparticle control and concluded that nanoparticles between 5 and 100 nm in diameter are not directly accumulated by plants. Gold nanoparticles were only observed in plants exposed to ionic gold in solution. Together, we believe our results imply that gold is taken up by the plant predominantly as an ionic form, and that plants respond to gold exposure by up-regulating genes for plant stress and down-regulating specific metal transporters to reduce gold uptake. PMID:24736522

  18. Investigating the toxicity, uptake, nanoparticle formation and genetic response of plants to gold.

    PubMed

    Taylor, Andrew F; Rylott, Elizabeth L; Anderson, Christopher W N; Bruce, Neil C

    2014-01-01

    We have studied the physiological and genetic responses of Arabidopsis thaliana L. (Arabidopsis) to gold. The root lengths of Arabidopsis seedlings grown on nutrient agar plates containing 100 mg/L gold were reduced by 75%. Oxidized gold was subsequently found in roots and shoots of these plants, but gold nanoparticles (reduced gold) were only observed in the root tissues. We used a microarray-based study to monitor the expression of candidate genes involved in metal uptake and transport in Arabidopsis upon gold exposure. There was up-regulation of genes involved in plant stress response such as glutathione transferases, cytochromes P450, glucosyl transferases and peroxidases. In parallel, our data show the significant down-regulation of a discreet number of genes encoding proteins involved in the transport of copper, cadmium, iron and nickel ions, along with aquaporins, which bind to gold. We used Medicago sativa L. (alfalfa) to study nanoparticle uptake from hydroponic culture using ionic gold as a non-nanoparticle control and concluded that nanoparticles between 5 and 100 nm in diameter are not directly accumulated by plants. Gold nanoparticles were only observed in plants exposed to ionic gold in solution. Together, we believe our results imply that gold is taken up by the plant predominantly as an ionic form, and that plants respond to gold exposure by up-regulating genes for plant stress and down-regulating specific metal transporters to reduce gold uptake. PMID:24736522

  19. Do anthropogenic aerosols enhance CO2 uptake by plants?

    NASA Astrophysics Data System (ADS)

    Strada, S.; Unger, N.

    2013-12-01

    Plant productivity (photosynthesis) is tightly connected to the supply of solar radiation and water and to surface temperature. Solar radiation reaching the Earth's surface and the water cycle are strongly modified by anthropogenic aerosols. Aerosols reduce the amount of global radiation and surface temperature, and they modify the partitioning between direct and diffuse radiation. Moreover, they modify cloud radiative properties and lifetime. These aerosols effects may influence Gross Primary Productivity (GPP): (1) by intensifying the diffuse-radiation fertilization effect (i.e. plant productivity is more efficient under diffuse light whose amount may increase due to aerosol loading); (2) by modifying water supply through suppression/enhancement of rainfall; (3) by reducing surface temperature. Among aerosol impacts on GPP, it is unclear if there exists a prevailing one, or if the prevailing impact varies across ecosystems. Feedbacks to GPP from the effects of biogenic secondary organic aerosol (BSOA) formed from vegetation reactive carbon emissions have not been investigated. Moreover, human-made pollution and biomass burning induce high ozone concentrations that simultaneously reduce plant productivity. We apply satellite observations and global model simulations to investigate the spatial pattern in the relationship between aerosols and plant productivity across different ecosystems, and whether plants control their diffuse radiation environment through the reactive carbon emissions. We quantify the correlation between MODIS GPP and: (1) fine-fraction Aerosol Optical Depth from MODIS (fAOD); (2) ozone levels in the middle troposphere from TES. The analysis of satellite data reveals strong positive correlation between GPP and fAOD in temperate and boreal ecosystems, and strong negative correlation in tropical ecosystems. The tropical ecosystem also presents strong negative correlation between GPP and O3. Simulations using Yale-E2 global carbon

  20. Uptake of explosives from contaminated soil by vegetation at the Joliet Army Ammunition Plant

    SciTech Connect

    Schneider, J.F.; Tomczyk, N.A.; Zellmer, S.D.; Banwart, W.L.; Houser, W.P.

    1994-06-01

    This study examines the uptake of explosives by vegetation growing on soils contaminated by 2,4,6-trinitrotoluene (TNT) in Group 61 at the Joliet Army Ammunition Plant (JAAP). Plant materials and soil from the root zone were sampled and analyzed to determine TNT uptake under natural field conditions. Standard USATHAMA methods were used to determine concentrations of explosives, their derivatives, and metabolites in the soil samples. No- explosives were detected in the aboveground portion of any plant sample. However, results indicate that TNT, 2-aminodinitrotoluene (2-ADNT), and/or 4-ADNT were present in some root samples. The presence of 2-ADNT and 4-ADNT increases the likelihood that explosives were taken up by plant roots, as opposed to their presence resulting from external soil contamination.

  1. Uptake and metabolism of 2,4,6-trinitrotoluene in higher plants.

    PubMed

    Görge, E; Brandt, S; Werner, D

    1994-12-01

    The fate of the explosive 2,4,6-TNT in plants is of major interest. Therefore, a method was developed to analyse TNT and derivatives in plant tissue. The method was utilized to investigate the uptake and metabolism of TNT inMedicago sativa andAllium schoenoprasum grown in hydroponic cultures containing TNT levels of 0.1 to 10 mg/1. Detectable concentrations of nitrotoluenes were significantly higher inAllium schoenoprasum than inMedicago sativa. The uptake of TNT in plants was directly related to the initial TNT level. The principal nitroaromatic components in roots and shoots of both plant species were identified as 4-ADNT and 2-ADNT in equal amounts, with substantially less TNT.

  2. Effects of light regime, temperature, and plant age on uptake of arsenic by Spartina pectinata and Carex stricta.

    PubMed

    Rofkar, Jordan R; Dwyer, Daryl F

    2011-07-01

    We report here on efforts to show that a combination of native wetland plant species might perform better than a monoculture in wetlands designed for arsenic remediation by supplementing weaknesses. Carex stricta and Spartina pectinata were used in hydroponic experiments. (i) Arsenic uptake was first assessed at two ages via exposure to control or arsenic-laden solutions (0 or 1.5 mg As L(-1) as Na2HAsO4) for two weeks. Age had no significant effect on arsenic concentrations in roots, but translocation factors were greater in older plants of C. stricta and S. pectinata (0.45 and 0.07, respectively) than in younger plants (0.10 and 0.01, respectively). (ii) Seasonal effects were assessed by determining uptake kinetics for both species in conditions representative of spring temperatures (15/5 degrees C) and light regimes (1050 micromol m(-2) s(-1), 13 h day(-1)) and summer temperatures (28/17 degrees C) and light regimes (1300 micromol m(-2) s(-1), 15 h day(-1)). Both species had comparable rates of arsenic uptake into roots in summer conditions (44.0 and 46.5 mg As kg(-1) dry wt. h(-1) in C. stricta and S. pectinata, respectively), but C. stricta had a higher maximum net influx rate in spring conditions (24.5 versus 10.4 mg As kg(-1) dry wt. h(-1)).

  3. Soil sorption and plant uptake of 2,4,6-trinitrotoluene

    SciTech Connect

    Pennington, J.C.

    1988-01-01

    Potential environmental hazards are posed by the presence of 2,4,6-trinitrotoluene (TNT) contamination in soils of US Army Ammunition Plants (AAPs). Adsorption and desorption studies were conducted on soil samples collected from 13 AAPs. TNT adsorption correlated most highly with cation exchange capacity, extractable iron, clay content, and percent organic carbon. Sequential desorption indicated that almost all of the adsorbed TNT was desorbed after three sequential desorption cycles. Plant uptake of TNT and two of its principal degradation products, 4-amino-2,6-dinitrotoluene (4ADNT) and 2-amino-4,6-dinitrotoluene (2ADNT), was also investigated. Results indicated that little TNT and 4ADNT, and no 2ADNT was absorbed by leafy portions of the test plant, yellow nutsedge (Cyperus esculentus). Plant uptake was greatest from 4ADNT-treated silts, an indication that 4ADNT is more readily mobilized into the plant than TNT or 2ANDT. Greater plant uptake from silt than from clay indicated that bioavailability is reduced in the clay. The reduction in bioavailability may be due to an increase in soil sorption of TNT and its degradation products over time.

  4. Uptake of nitroaromatic compounds in plants : Implications for risk assessment of ammunition sites.

    PubMed

    Schneider, K; Oltmanns, J; Radenberg, T; Schneider, T; Pauly-Mundegar, D

    1996-09-01

    The uptake of nitroaromatic compounds by plants from the soil was studied at an ammunition site. After the development of analytical methods for 2,4,6-trinitrotoluene, aminodinitrotoluenes and dinitrotoluenes in plant material, we could show that these substances accumulated in the roots of plants and are found to a lesser extent inleaves and stems. We observed only moderate differences between various plant species. It is likely that a metabolic transformation in plants leads to the formation of dinitrotoluenes which are considered to be potent carcinogens. Results from soils with a wide range of explosive concentrations show a good correlation between the plant and soil concentrations. The relative accumulation in plant material is higher at lower soil concentrations. At low soil concentrations of about 1 mg trinitrotoluene/kg soil, an accumulation factor of about 0.5 can be derived. These data are an important input for the risk assessment of ammunition sites.

  5. Effect of plant growth-promoting rhizobacteria inoculation on cadmium (Cd) uptake by Eruca sativa.

    PubMed

    Kamran, Muhammad Aqeel; Syed, Jabir Hussain; Eqani, Syed Ali Musstjab Akber Shah; Munis, Muhammad Farooq Hussain; Chaudhary, Hassan Javed

    2015-06-01

    Microbe-assisted phyto-remediation approach is widely applied and appropriate choice to reduce the environmental risk of heavy metals originated from contaminated soils. The present study was designed to screen out the nested belongings of Eruca sativa plants and Pseudomonas putida (ATCC 39213) at varying cadmium (Cd) levels and their potential to deal with Cd uptake from soils. We carried out pot trial experiment by examining the soil containing E. sativa seedlings either treated with P. putida and/or untreated plants subjected to three different levels (ppm) of Cd (i.e., 150, 250, and 500). In all studied cases, we observed an increase in Cd uptake for E. sativa plants inoculated with P. putida than those of un-inoculated plants. Cd toxicity was assessed by recording different parameters including stunted shoot growth, poor rooting, and Cd residual levels in the plants that were not inoculated with P. putida. Significant difference (p < 0.05) of different growth parameters for inoculated vs non-inoculated plants was observed at all given treatments. However, among the different treatments, E. sativa exhibited increased values for different growth parameters (except proline contents) at lower Cd levels than those of their corresponding higher levels, shoot length (up to 27 %), root length (up to 32 %), whole fresh plant (up to 40 %), dry weight (up to 22 %), and chlorophyll contents (up to 26 %). Despite the hyperaccumulation of Cd in whole plant of E. sativa, P. putida improved the plant growth at varying levels of Cd supply than those of associated non-inoculated plants. Present results indicated that inoculation with P. putida enhanced the Cd uptake potential of E. sativa and favors the healthy growth under Cd stress.

  6. Plant uptake of elements in soil and pore water: field observations versus model assumptions.

    PubMed

    Raguž, Veronika; Jarsjö, Jerker; Grolander, Sara; Lindborg, Regina; Avila, Rodolfo

    2013-09-15

    Contaminant concentrations in various edible plant parts transfer hazardous substances from polluted areas to animals and humans. Thus, the accurate prediction of plant uptake of elements is of significant importance. The processes involved contain many interacting factors and are, as such, complex. In contrast, the most common way to currently quantify element transfer from soils into plants is relatively simple, using an empirical soil-to-plant transfer factor (TF). This practice is based on theoretical assumptions that have been previously shown to not generally be valid. Using field data on concentrations of 61 basic elements in spring barley, soil and pore water at four agricultural sites in mid-eastern Sweden, we quantify element-specific TFs. Our aim is to investigate to which extent observed element-specific uptake is consistent with TF model assumptions and to which extent TF's can be used to predict observed differences in concentrations between different plant parts (root, stem and ear). Results show that for most elements, plant-ear concentrations are not linearly related to bulk soil concentrations, which is congruent with previous studies. This behaviour violates a basic TF model assumption of linearity. However, substantially better linear correlations are found when weighted average element concentrations in whole plants are used for TF estimation. The highest number of linearly-behaving elements was found when relating average plant concentrations to soil pore-water concentrations. In contrast to other elements, essential elements (micronutrients and macronutrients) exhibited relatively small differences in concentration between different plant parts. Generally, the TF model was shown to work reasonably well for micronutrients, whereas it did not for macronutrients. The results also suggest that plant uptake of elements from sources other than the soil compartment (e.g. from air) may be non-negligible.

  7. Cyclic variations in nitrogen uptake rate of soybean plants: effects of external nitrate concentration

    NASA Technical Reports Server (NTRS)

    Tolley-Henry, L.; Raper, C. D. Jr; Granato, T. C.; Raper CD, J. r. (Principal Investigator)

    1988-01-01

    Net uptake of NO3- by non-nodulated soybean plants [Glycine max (L.) Merr. cv. Ransom] growing in flowing hydroponic cultures containing 0.5, 1.0 and 10.0 mol m-3 NO3- was measured daily during a 24-d period of vegetative development to determine if amplitude of maximum and minimum rates of net NO3- uptake are responsive to external concentrations of NO3-. Removal of NO3- from the replenished solutions during each 24-h period was determined by ion chromatography. Neither dry matter accumulation nor the periodicity of oscillations in net uptake rate was altered by the external NO3- concentrations. The maxima of the oscillations in net uptake rate, however, increased nearly 3-fold in response to external NO3- concentrations. The maxima and minima, respectively, changed from 4.0 and 0.6 mmol NO3- per gram root dry weight per day at an external solution level of 0.5 mol m-3 NO3- to 15.2 and -2.7 mmol NO3- per gram root dry weight per day at an external solution level of 10.0 mol m-3 NO3-. The negative values for minimum net uptake rate from 10.0 mol m-3 NO3- solutions show that net efflux was occurring and indicate that the magnitude of the efflux component of net uptake was responsive to external concentration of NO3-.

  8. Nitrogen deposition and prey nitrogen uptake control the nutrition of the carnivorous plant Drosera rotundifolia.

    PubMed

    Millett, J; Foot, G W; Svensson, B M

    2015-04-15

    Nitrogen (N) deposition has important negative impacts on natural and semi-natural ecosystems, impacting on biotic interactions across trophic levels. Low-nutrient systems are particularly sensitive to changes in N inputs and are therefore more vulnerable to N deposition. Carnivorous plants are often part of these ecosystems partly because of the additional nutrients obtained from prey. We studied the impact of N deposition on the nutrition of the carnivorous plant Drosera rotundifolia growing on 16 ombrotrophic bogs across Europe. We measured tissue N, phosphorus (P) and potassium (K) concentrations and prey and root N uptake using a natural abundance stable isotope approach. Our aim was to test the impact of N deposition on D. rotundifolia prey and root N uptake, and nutrient stoichiometry. D. rotundifolia root N uptake was strongly affected by N deposition, possibly resulting in reduced N limitation. The contribution of prey N to the N contained in D. rotundifolia ranged from 20 to 60%. N deposition reduced the maximum amount of N derived from prey, but this varied below this maximum. D. rotundifolia tissue N concentrations were a product of both root N availability and prey N uptake. Increased prey N uptake was correlated with increased tissue P concentrations indicating uptake of P from prey. N deposition therefore reduced the strength of a carnivorous plant-prey interaction, resulting in a reduction in nutrient transfer between trophic levels. We suggest that N deposition has a negative impact on D. rotundifolia and that responses to N deposition might be strongly site specific. PMID:25655989

  9. Uptake of Uranium and Other Elements of Concern by Plants Growing on Uranium Mill Tailings Disposal Cells

    NASA Astrophysics Data System (ADS)

    Joseph, C. N.; Waugh, W.; Glenn, E.

    2015-12-01

    The U.S. Department of Energy (DOE) is responsible for long-term stewardship of disposal cells for uranium mill tailings throughout the United States. Rock-armored disposal cell covers create favorable habitat for deep-rooted plants by reducing soil evaporation, increasing soil water storage, and trapping windblown dust, thereby providing water and nutrients for plant germination and establishment. DOE is studying the tradeoffs of potential detrimental and beneficial effects of plants growing on disposal cell covers to develop a rational and consistent vegetation management policy. Plant roots often extend vertically through disposal cell covers into underlying tailings, therefore, uptake of tailings contaminants and dissemination through animals foraging on stems and leaves is a possible exposure pathway. The literature shows that plant uptake of contaminants in uranium mill tailings occurs, but levels can vary widely depending on plant species, tailings and soil chemistry, and cover soil hydrology. Our empirical field study measured concentrations of uranium, radium, thorium, molybdenum, selenium, manganese, lead, and arsenic in above ground tissues harvested from plants growing on disposal cells near Native American communities in western states that represent a range of climates, cover designs, cover soil types, and vegetation types. For risk screening, contaminant levels in above ground tissues harvested from plants on disposal cells were compared to Maximum Tolerance Levels (MTLs) set for livestock by the National Research Council, and to tissue levels in the same plant species growing in reference areas near disposal cells. Although tailings were covered with uncontaminated soils, for 14 of 46 comparisons, levels of uranium and other contaminants were higher in plants growing on disposal cells compared to reference area plants, indicating possible mobilization of these elements from the tailing into plant tissues. However, with one exception, all plant

  10. Copper-resistant bacteria reduces oxidative stress and uptake of copper in lentil plants: potential for bacterial bioremediation.

    PubMed

    Islam, Faisal; Yasmeen, Tahira; Ali, Qasim; Mubin, Muhammad; Ali, Shafaqat; Arif, Muhammad Saleem; Hussain, Sabir; Riaz, Muhammad; Abbas, Farhat

    2016-01-01

    For effective microbe-assisted bioremediation, metal-resistant plant growth-promoting bacteria (PGPB) must facilitate plant growth by restricting excess metal uptake in plants, leading to prevent its bio-amplification in the ecosystem. The aims of our study were to isolate and characterize copper (Cu)-resistant PGPB from waste water receiving contaminated soil. In addition, we investigated the phytotoxic effect of copper on the lentil plants inoculated with copper-resistant bacteria Providencia vermicola, grown in copper-contaminated soil. Copper-resistant P. vermicola showed multiple plant growth promoting characteristics, when used as a seed inoculant. It protected the lentil plants from copper toxicity with a considerable increase in root and shoot length, plant dry weight and leaf area. A notable increase in different gas exchange characteristics such as A, E, C i , g s , and A/E, as well as increase in N and P accumulation were also recorded in inoculated plants as compared to un-inoculated copper stressed plants. In addition, leaf chlorophyll content, root nodulation, number of pods, 1,000 seed weight were also higher in inoculated plants as compared with non-inoculated ones. Anti-oxidative defense mechanism improved significantly via elevated expression of reactive oxygen species -scavenging enzymes including ascorbate peroxidase, superoxide dismutase, catalase, and guaiacol peroxidase with alternate decrease in malondialdehyde and H2O2 contents, reduced electrolyte leakage, proline, and total phenolic contents suggesting that inoculation of P. vermicola triggered heavy metals stress-related defense pathways under copper stress. Overall, the results demonstrated that the P. vermicola seed inoculation confer heavy metal stress tolerance in lentil plant which can be used as a potent biotechnological tool to cope with the problems of copper pollution in crop plants for better yield.

  11. Copper-resistant bacteria reduces oxidative stress and uptake of copper in lentil plants: potential for bacterial bioremediation.

    PubMed

    Islam, Faisal; Yasmeen, Tahira; Ali, Qasim; Mubin, Muhammad; Ali, Shafaqat; Arif, Muhammad Saleem; Hussain, Sabir; Riaz, Muhammad; Abbas, Farhat

    2016-01-01

    For effective microbe-assisted bioremediation, metal-resistant plant growth-promoting bacteria (PGPB) must facilitate plant growth by restricting excess metal uptake in plants, leading to prevent its bio-amplification in the ecosystem. The aims of our study were to isolate and characterize copper (Cu)-resistant PGPB from waste water receiving contaminated soil. In addition, we investigated the phytotoxic effect of copper on the lentil plants inoculated with copper-resistant bacteria Providencia vermicola, grown in copper-contaminated soil. Copper-resistant P. vermicola showed multiple plant growth promoting characteristics, when used as a seed inoculant. It protected the lentil plants from copper toxicity with a considerable increase in root and shoot length, plant dry weight and leaf area. A notable increase in different gas exchange characteristics such as A, E, C i , g s , and A/E, as well as increase in N and P accumulation were also recorded in inoculated plants as compared to un-inoculated copper stressed plants. In addition, leaf chlorophyll content, root nodulation, number of pods, 1,000 seed weight were also higher in inoculated plants as compared with non-inoculated ones. Anti-oxidative defense mechanism improved significantly via elevated expression of reactive oxygen species -scavenging enzymes including ascorbate peroxidase, superoxide dismutase, catalase, and guaiacol peroxidase with alternate decrease in malondialdehyde and H2O2 contents, reduced electrolyte leakage, proline, and total phenolic contents suggesting that inoculation of P. vermicola triggered heavy metals stress-related defense pathways under copper stress. Overall, the results demonstrated that the P. vermicola seed inoculation confer heavy metal stress tolerance in lentil plant which can be used as a potent biotechnological tool to cope with the problems of copper pollution in crop plants for better yield. PMID:26387695

  12. Environmental dependencies of plant CO2 uptake in theory, data, and simulations

    NASA Astrophysics Data System (ADS)

    Wang, Han; Prentice, Colin; Keenan, Trevor; Peng, Shushi; Piao, Shilong; Cornwell, William; Davis, Tyler; Wright, Ian; Peng, Changhui

    2016-04-01

    The rate of carbon uptake by land plants depends on the light use efficiency (LUE) of photosynthesis. LUE is the ratio of primary production to light absorbed by foliage. This in turn depends on the ratio of leaf-internal to ambient carbon dioxide partial pressures (χ). However, current state-of-the-art land ecosystem models represent the environmental dependencies of these two key quantities in an empirical and incomplete way. Their modeled values have not been systematically tested against observations, a situation contributing to the many uncertainties afflicting current model estimates and future projections of terrestrial carbon uptake. We present a theory for the dependencies of χ and LUE on growing-season air temperature, vapour pressure deficit (VPD), CO2 concentration and elevation based on two hypotheses rooted in eco-physiological optimality. Theoretically derived environmental dependencies of χ and LUE are shown to be precisely and quantitatively consistent with global data sets of (a) stable carbon isotope measurements, and (b) gross primary production derived from CO2 flux measurements. The modeled environmental dependencies of χ and LUE according to seven state-of-the-art land ecosystem models participating in the TRENDY2 model intercomparison project are then derived from model outputs and compared with the theoretical relationships as a benchmark. The results show large discrepancies among model-predicted relationships of χ and LUE to temperature and VPD both in spatial and temporal dimensions. The influence of elevation on χ and LUE is also inconsistent among models, as is their predicted sensitivity to CO2 enrichment. This work suggests that a top-priority task for land ecosystem models should be to reformulate the environmental drivers of χ and LUE relationships to be consistent with observations. It also indicates that eco-physiological optimality hypotheses provide a promising route to an improved predictive understanding of terrestrial

  13. Antimony uptake, translocation and speciation in rice plants exposed to antimonite and antimonate.

    PubMed

    Ren, Jing-Hua; Ma, Lena Q; Sun, Hong-Jie; Cai, Fei; Luo, Jun

    2014-03-15

    Antimony (Sb) accumulation in rice is a potential threat to human health, but its uptake mechanisms are unclear. A hydroponic experiment was conducted to investigate uptake, translocation, speciation and subcellular distribution of Sb in rice plants exposed to antimonite (SbIII) and antimonate (SbV) at 0.2, 1.0 or 5.0 mg/L for 4h. More Sb was accumulated in iron plaque than in the plant, with both the roots (~10-12 times) and Fe plaque (~28-54 times) sequestering more SbIII than SbV. The presence of iron plaque decreased uptake of both SbV and SbIII. SbIII uptake kinetics fitted better to the Michaelis-Menten function than SbV. Antimonate (56 to 98%) was the predominant form in rice plant with little methylated species being detected using HPLC-ICP-MS. Cell walls accumulated more Sb than organelles and cytosol, which were considered as the first barrier against Sb entering into cells. Sb transformation and subcellular distribution can help to understand the metabolic mechanisms of Sb in rice.

  14. Arsenic as a food chain contaminant: mechanisms of plant uptake and metabolism and mitigation strategies.

    PubMed

    Zhao, Fang-Jie; McGrath, Steve P; Meharg, Andrew A

    2010-01-01

    Arsenic (As) is an environmental and food chain contaminant. Excessive accumulation of As, particularly inorganic arsenic (As(i)), in rice (Oryza sativa) poses a potential health risk to populations with high rice consumption. Rice is efficient at As accumulation owing to flooded paddy cultivation that leads to arsenite mobilization, and the inadvertent yet efficient uptake of arsenite through the silicon transport pathway. Iron, phosphorus, sulfur, and silicon interact strongly with As during its route from soil to plants. Plants take up arsenate through the phosphate transporters, and arsenite and undissociated methylated As species through the nodulin 26-like intrinsic (NIP) aquaporin channels. Arsenate is readily reduced to arsenite in planta, which is detoxified by complexation with thiol-rich peptides such as phytochelatins and/or vacuolar sequestration. A range of mitigation methods, from agronomic measures and plant breeding to genetic modification, may be employed to reduce As uptake by food crops.

  15. Arsenic as a food chain contaminant: mechanisms of plant uptake and metabolism and mitigation strategies.

    PubMed

    Zhao, Fang-Jie; McGrath, Steve P; Meharg, Andrew A

    2010-01-01

    Arsenic (As) is an environmental and food chain contaminant. Excessive accumulation of As, particularly inorganic arsenic (As(i)), in rice (Oryza sativa) poses a potential health risk to populations with high rice consumption. Rice is efficient at As accumulation owing to flooded paddy cultivation that leads to arsenite mobilization, and the inadvertent yet efficient uptake of arsenite through the silicon transport pathway. Iron, phosphorus, sulfur, and silicon interact strongly with As during its route from soil to plants. Plants take up arsenate through the phosphate transporters, and arsenite and undissociated methylated As species through the nodulin 26-like intrinsic (NIP) aquaporin channels. Arsenate is readily reduced to arsenite in planta, which is detoxified by complexation with thiol-rich peptides such as phytochelatins and/or vacuolar sequestration. A range of mitigation methods, from agronomic measures and plant breeding to genetic modification, may be employed to reduce As uptake by food crops. PMID:20192735

  16. Molecular and physiological interactions of urea and nitrate uptake in plants

    PubMed Central

    Pinton, Roberto; Tomasi, Nicola; Zanin, Laura

    2016-01-01

    While nitrate acquisition has been extensively studied, less information is available on transport systems of urea. Furthermore, the reciprocal influence of the two sources has not been clarified, so far. In this review, we will discuss recent developments on plant response to urea and nitrate nutrition. Experimental evidence suggests that, when urea and nitrate are available in the external solution, the induction of the uptake systems of each nitrogen (N) source is limited, while plant growth and N utilization is promoted. This physiological behavior might reflect cooperation among acquisition processes, where the activation of different N assimilatory pathways (cytosolic and plastidic pathways), allow a better control on the nutrient uptake. Based on physiological and molecular evidence, plants might increase (N) metabolism promoting a more efficient assimilation of taken-up nitrogen. The beneficial effect of urea and nitrate nutrition might contribute to develop new agronomical approaches to increase the (N) use efficiency in crops. PMID:26338073

  17. Uptake of explosives from contaminated soil by existing vegetation at the Joliet Army Ammunition Plant

    SciTech Connect

    Schneider, J.F.; Tomczyk, N.A.; Zellmer, S.D.; Banwart, W.L. |

    1994-01-01

    This study examines the uptake of explosives by existing vegetation growing in TNT-contaminated soils on Group 61 at the Joliet Army Ammunition Plant (JAAP). The soils in this group were contaminated more than 40 years ago. In this study, existing plant materials and soil from the root zone were sampled from 15 locations and analyzed to determine TNT uptake by plants under natural field conditions. Plant materials were separated by species if more than one species was present at a sampling location. Standard methods were used to determine concentrations of explosives, their derivatives, and metabolites in the soil samples. Plant materials were also analyzed. No. explosives were detected in the aboveground portion of any plant sample. However, the results indicate that TNT, 2-amino DNT, and/or 4-amino DNT were found in some root samples of false boneset (Kuhnia eupatorioides), teasel (Dipsacus sylvestris), and bromegrass (Bromus inermis). It is possible that slight soil contamination remained on the roots, especially in the case of the very fine roots for species like bromegrass, where washing was difficult. The presence of 2-amino DNT and 4-amino DNT, which could be plant metabolites of TNT, increases the likelihood that explosives were taken up by plant roots, as opposed to their presence resulting from external soil contamination.

  18. Uptake of explosives from contaminated soil by existing vegetation at the Iowa Army Ammunition Plant

    SciTech Connect

    Schneider, J.F.; Zellmer, S.D.; Tomczyk, N.A.; Rastorier, J.R.; Chen, D.; Banwart, W.L.

    1995-02-01

    This study examines the uptake of explosives by existing vegetation growing in soils contaminated with 2,4,6-trinitrotoluene (TNT) and 1,3,5-trinitro-3,5-triazine (RDX) in three areas at the Iowa Army Ammunition Plant (IAAP). To determine explosives uptake under natural environmental conditions, existing plant materials and soil from the root zone were sampled at different locations in each area, and plant materials were separated by species. Standard methods were used to determine the concentrations of explosives, their derivatives, and metabolites in the soil samples. Plant materials were also analyzed. The compound TNT was not detected in the aboveground portion of plants, and vegetation growing on TNT-contaminated soils is not considered a health hazard. However, soil and plant roots may contain TNT degradation products that may be toxic; hence, their consumption is not advised. The compound RDX was found in the tops and roots of plants growing on RDX-contaminated soils at all surveyed sites. Although RDX is not a listed carcinogen, several of its potentially present degradation products are carcinogens. Therefore, the consumption of any plant tissues growing on RDX-contaminated sites should be considered a potential health hazard.

  19. Differential uptake and translocation of β-HCH and dieldrin by several plant species from hydroponic medium.

    PubMed

    Namiki, Sayuri; Otani, Takashi; Seike, Nobuyasu; Satoh, Shinobu

    2015-03-01

    To compare the uptake and translocation of hydrophobic organic chemicals by plant species, the authors performed uptake experiments with β-1,2,3,4,5,6-hexachlorocyclohexane (β-HCH) and 1,2,3,4,10,10-Hexachloro-6,7-epoxy-1,4,4a,5,6,7,8,8a-octahydro-endo-1,4-exo-5,8-dimethanonaphthalene (dieldrin) using 5 species: Hordeum vulgare, Glycine max, Solanum lycopersicum, Brassica oleracea, and Cucurbita pepo. The present study evaluated uptake ability using root concentration factor (RCF) and translocation ability by transpiration stream concentration factor (TSCF). The RCFs of β-HCH and dieldrin did not differ remarkably among species, except that the RCF of β-HCH in B. oleracea was high. The TSCFs of β-HCH and dieldrin were high in C. pepo, which was not superior in uptake as estimated by RCF. The TSCF of dieldrin in C. pepo was decreased in darkness and was markedly decreased by heating of roots. These results support the hypothesis that transport proteins produced in the root contribute to dieldrin translocation. In contrast, TSCF of β-HCH was not decreased by these treatments. Therefore, translocation of β-HCH might not need the contribution of transport proteins. It is possible that C. pepo has a certain function to transport hydrophobic organic chemicals smoothly in root tissues. PMID:25470472

  20. Differential uptake and translocation of β-HCH and dieldrin by several plant species from hydroponic medium.

    PubMed

    Namiki, Sayuri; Otani, Takashi; Seike, Nobuyasu; Satoh, Shinobu

    2015-03-01

    To compare the uptake and translocation of hydrophobic organic chemicals by plant species, the authors performed uptake experiments with β-1,2,3,4,5,6-hexachlorocyclohexane (β-HCH) and 1,2,3,4,10,10-Hexachloro-6,7-epoxy-1,4,4a,5,6,7,8,8a-octahydro-endo-1,4-exo-5,8-dimethanonaphthalene (dieldrin) using 5 species: Hordeum vulgare, Glycine max, Solanum lycopersicum, Brassica oleracea, and Cucurbita pepo. The present study evaluated uptake ability using root concentration factor (RCF) and translocation ability by transpiration stream concentration factor (TSCF). The RCFs of β-HCH and dieldrin did not differ remarkably among species, except that the RCF of β-HCH in B. oleracea was high. The TSCFs of β-HCH and dieldrin were high in C. pepo, which was not superior in uptake as estimated by RCF. The TSCF of dieldrin in C. pepo was decreased in darkness and was markedly decreased by heating of roots. These results support the hypothesis that transport proteins produced in the root contribute to dieldrin translocation. In contrast, TSCF of β-HCH was not decreased by these treatments. Therefore, translocation of β-HCH might not need the contribution of transport proteins. It is possible that C. pepo has a certain function to transport hydrophobic organic chemicals smoothly in root tissues.

  1. Uptake of Cadmium by Flue-Cured Tobacco Plants: Exploring Bioavailability

    NASA Astrophysics Data System (ADS)

    Holzer, I.; Robarge, W. P.; Vann, M. C.

    2015-12-01

    Scientific understanding of cadmium (Cd) cycling in North Carolina tobacco plants and soils has lagged, even as production of flue-cured tobacco remains an important part of the NC economy ($903 million in 2014). Cd is considered a tobacco contaminant. When tobacco is burned, Cd can exist as a fine aerosol and subsequent inhalation is linked to cancer. Tobacco root exudates enhance Cd uptake, even though the Cd concentration in NC soils is <0.1 mg/kg. Quantifying Cd concentrations in tobacco plants is crucial to understanding Cd bioavailability and implementing soil remediation efforts. The objective of this study was to develop a Cd mass balance for flue-cured tobacco grown under field conditions in NC. Whole plant samples were collected at transplanting and every 2 weeks thereafter until harvest. Individual plants were segregated into root, stalk and individual leaves (n = 15 whole plants/sampling date; composite samples were taken early in the growing season). After recording dry mass, samples were analyzed using ion-coupled plasma optical emission spectrometry or ion-coupled plasma mass spectrometry. Lower leaves contained the highest Cd concentrations ( 7-10 mg/kg). Leaves occupying the upper 50% of the plant had Cd concentrations of 2 mg/kg. Uptake rate was greatest from day 27 to 66 ( 21.5 μg Cd/day). Selective Cd uptake appears evident between day 27 and 43, but overall the relative rate of Cd uptake was similar to other trace metals and micronutrients. Cd distribution within the plants mirrored the distribution of calcium, a macronutrient. Of the 8 mg of soil extractable Cd (0.075 mg/kg) in the rooting zone, 15.0% (1203 μg) is removed by uptake. Of this 15%, 64.2% (772.2 μg) is exported at harvest, and 35.8% (430.8 μg; lower leaves, roots, stalks) is returned to the soil. This study must be replicated to account for seasonal and soil variations. These results do inform selection of tobacco strains that limit uptake of trace metals, particularly Cd.

  2. K+ uptake in plant roots. The systems involved, their regulation and parallels in other organisms.

    PubMed

    Nieves-Cordones, Manuel; Alemán, Fernando; Martínez, Vicente; Rubio, Francisco

    2014-05-15

    Potassium (K(+)) is an essential macronutrient for plants. It is taken into the plant by the transport systems present in the plasma membranes of root epidermal and cortical cells. The identity of these systems and their regulation is beginning to be understood and the systems of K(+) transport in the model species Arabidopsis thaliana remain far better characterized than in any other plant species. Roots can activate different K(+) uptake systems to adapt to their environment, important to a sessile organism that needs to cope with a highly variable environment. The mechanisms of K(+) acquisition in the model species A. thaliana are the best characterized at the molecular level so far. According to the current model, non-selective channels are probably the main pathways for K(+) uptake at high concentrations (>10mM), while at intermediate concentrations (1mM), the inward rectifying channel AKT1 dominates K(+) uptake. Under lower concentrations of external K(+) (100μM), AKT1 channels, together with the high-affinity K(+) uptake system HAK5 contribute to K(+) acquisition, and at extremely low concentrations (<10μM) the only system capable of taking up K(+) is HAK5. Depending on the species the high-affinity system has been named HAK5 or HAK1, but in all cases it fulfills the same functions. The activation of these systems as a function of the K(+) availability is achieved by different mechanisms that include phosphorylation of AKT1 or induction of HAK5 transcription. Some of the characteristics of the systems for root K(+) uptake are shared by other organisms, whilst others are specific to plants. This indicates that some crucial properties of the ancestral of K(+) transport systems have been conserved through evolution while others have diverged among different kingdoms.

  3. A New Oidiodendron maius Strain Isolated from Rhododendron fortunei and its Effects on Nitrogen Uptake and Plant Growth.

    PubMed

    Wei, Xiangying; Chen, Jianjun; Zhang, Chunying; Pan, Dongming

    2016-01-01

    A new mycorrhizal fungal strain was isolated from hair roots of Rhododendron fortunei Lindl. grown in Huading Forest Park, Zhejiang Province, China. Morphological characterization and internal transcribed spacer rDNA analysis suggested that it belongs to Oidiodendron maius Barron, and we designated it as strain Om19. Methods for culturing Om19 were established, and the ability of Om19 to form mycorrhizae on R. fortunei was evaluated in a peat-based substrate. Microscopic observations showed hyaline hyphae on the surface of hair roots and crowded hyphal complexes (hyphal coils) inside root cortical cells of R. fortunei after inoculation, indicating that the roots were well colonized by Om19. In a second experiment, fresh and dry weight of R. fortunei 2 months after Om19 inoculation were greater than uninoculated plants, and the total nitrogen absorbed by plants inoculated with Om19 was greater than the uninoculated controls. qRT-PCR analysis of five genes related to N uptake and metabolism (two nitrate transporters, an ammonium transporter, glutamine synthetase, and glutamate synthase) showed that these genes were highly upregulated with twofold to ninefold greater expression in plants inoculated with Om19 compared to uninoculated plants. In the third experiment, Om19 was inoculated into the peat-based substrate for growing Formosa azalea (Rhododendron indica 'Formosa'). 'Formosa' azalea plants grown in the inoculated substrate had larger canopies and root systems compared to uninoculated plants. Our results show that Om19 could be an important microbial tool for improving production of Rhododendron plants.

  4. [A review of uptake, translocation and phytotoxicity of engineered nanoparticles in plants].

    PubMed

    Yang, Xin-Ping; Zhao, Fang-Jie

    2013-11-01

    With the increasing use of engineered nanoparticles, these materials will inevitably be released into the environment with unknown consequences. The interactions between engineered nanoparticles and plants are of particular concern, and the uptake by plants may constitute one of the main routes of exposure for species at a higher trophic level, leading to possible biomagnification of nanoparticles in the food chain. A review of the current literature shows that nanoparticles can be taken up by plants and cause phytotoxicity. The mechanisms by which engineered nanoparticles penetrate plant cells are still not well understood. Most of the studies have been performed with a few plant species under non-natural conditions such as hydroponics, and have included only the germination or seedling growth stage. Nanoparticles may undergo biotransformation and subsequent translocation within plants, although the mechanisms are poorly understood. Phytotoxicity is an important aspect for assessing potential environmental impacts of nanoparticles, but the mode of toxicity remains to be investigated.

  5. Genome Mapping in Plant Comparative Genomics.

    PubMed

    Chaney, Lindsay; Sharp, Aaron R; Evans, Carrie R; Udall, Joshua A

    2016-09-01

    Genome mapping produces fingerprints of DNA sequences to construct a physical map of the whole genome. It provides contiguous, long-range information that complements and, in some cases, replaces sequencing data. Recent advances in genome-mapping technology will better allow researchers to detect large (>1kbp) structural variations between plant genomes. Some molecular and informatics complications need to be overcome for this novel technology to achieve its full utility. This technology will be useful for understanding phenotype responses due to DNA rearrangements and will yield insights into genome evolution, particularly in polyploids. In this review, we outline recent advances in genome-mapping technology, including the processes required for data collection and analysis, and applications in plant comparative genomics.

  6. Phytozome System for Comparative Plant Genomics

    2011-09-27

    Phytozome is a joint project of the Department of Energy's Joint Genome Institute and the UC Berkeley Center for Integrative Genomics to facilitate comparative genomic studies amongst green plants. Families of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. As of release 7.0, Phytozome providesmore » access to twenty-five sequenced and annotated green plant genomes which have been clustered into gene families at eleven evolutionarily significant nodes., Where possible, each gene has been annotated with PFAM, KOG, KEGG, and PANTHER assignments, and publicly available annotations from RefSeq, UniProt, TAIR, JGI are lyper-linked and searchable.« less

  7. Phytozome System for Comparative Plant Genomics

    SciTech Connect

    2011-09-27

    Phytozome is a joint project of the Department of Energy's Joint Genome Institute and the UC Berkeley Center for Integrative Genomics to facilitate comparative genomic studies amongst green plants. Families of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These families allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. As of release 7.0, Phytozome provides access to twenty-five sequenced and annotated green plant genomes which have been clustered into gene families at eleven evolutionarily significant nodes., Where possible, each gene has been annotated with PFAM, KOG, KEGG, and PANTHER assignments, and publicly available annotations from RefSeq, UniProt, TAIR, JGI are lyper-linked and searchable.

  8. Investigation of Metal Uptake and Translocation in Wetland Plants from Urban Coastal Areas

    NASA Astrophysics Data System (ADS)

    Feng, H.; Zhang, W.; Qian, Y.; Liu, W.; Yu, L.; Jones, K. W.; Liu, C.; Tappero, R.

    2013-12-01

    This research mainly focused on the use of synchrotron micro XRF technique to study the mechanisms of metal uptake by plants in conjunction with other measurements to provide insight metal concentrations and distributions in the rhizosphere root system. Many urban-industrial areas exhibit environmental degradation. One of the most common issues is sediment metal contamination resulting from past industrial land uses. The wetland ecosystem in urban coastal areas, such as New Jersey, USA, and Shanghai, China, is a unique laboratory for investigating sediment remediation and wetland ecological rehabilitations. Understanding the natural processes that control the mobility of metals in wetland plants is important to understand the metal biochemical cycle. Wetland plants can uptake metals from rhizosphere soils through their root system and store these metals within the plant biomass. The accumulation of metals in wetland plants provides a potential approach for brownfield remediation and wetland restoration. In the rhizosphere, the role of Fe plaque, which forms on the surface of wetland plant roots, has been an issue of debate in controlling metal biogeochemical cycle. It was reported that due to the large specific surface area of iron-oxides for metal sequestration, Fe plaque can provide a reactive substrate to scavenge metals. Several early studies suggest that the Fe plaque serves as a barrier preventing heavy metals from entering plant roots. However, others suggest that Fe plaque is not the main barrier. Therefore, investigation of the natural processes that control the mobility of metals from sediment to wetland plants is a critical step in understanding metal translocation and geochemical cycling in wetlands. In this study we found that metal concentrations and distributions in the root cross section from the epidermis to the vascular cylinder were apparently different. Two clusters of metal distributions were seen with Fe and Pb mainly distributed in the

  9. Mathematical modelling study for water uptake of steadily growing plant root

    NASA Astrophysics Data System (ADS)

    Chu, Jiaqing; Jiao, Weiping; Xu, Jianjun

    2008-02-01

    The root system of plant is a vitally important organ for living plant. One of the major functions of the root system is uptaking water and nutrients from the soil. The present paper analyzes the whole process of water uptake from soil by a steadily growing plant with a single slender root. We start from the basic principles of physics and fluid-dynamics, consider the structure characteristics of the water transport channel formed by the tiny xylems tubes inside plant, and establish a simplified coherent mathematical model to describe the water transport in the complete system consisting of soil, individual plant, including root, stem and leaves-atmosphere, on the basis of the plant physiology. Moreover, we resolve the proposed mathematical model for a simple artificial plant model under a variety of conditions, in terms of the numerical approach as well as analytical approach. It is shown that the results obtained by both approaches are in very good agreement; the theoretical predictions are qualitatively consistent with the practical experiences very well. The simplified mathematical model established in the present paper may provide a basis for the further investigations on the more sophisticated mathematical model.

  10. Plant diversity effects on ecosystem evapotranspiration and carbon uptake: a controlled environment (Ecotron) and modeling approach

    NASA Astrophysics Data System (ADS)

    Milcu, Alexandru; Roy, Jacques

    2016-04-01

    Effects of species and functional diversity of plants on ecosystem evapotranspiration and carbon fluxes have been rarely assessed simultaneously. Here we present the results from an experiment that combined a lysimeter setup in a controlled environment facility (Ecotron) with large ecosystem samples/ monoliths originating from a long-term biodiversity experiment ("The Jena Experiment") and a modelling approach. We aimed at (1) quantifying the impact of plant species richness (4 vs. 16 species) on day- and night-time ecosystem water vapor fluxes and carbon uptake, (2) partitioning ecosystem evapotranspiration into evaporation and plant transpiration using the Shuttleworth and Wallace (SW) energy partitioning model, and (3) identifying the most parsimonious predictors of water vapor vapor and CO2 fluxes using plant functional trait-based metrics such as functional diversity and community weighted means. The SW model indicated that at low plant species richness, a higher proportion of the available energy was diverted to evaporation (a non-productive flux), while at higher species richness the proportion of ecosystem transpiration (a production-related water flux) increased. This led to an increased carbon gain per amount of water vapor loss (i.e. increased water use efficiency). While the LAI controlled the carbon and water fluxes, we also found that the diversity of plant functional traits, and in particular of leaf nitrogen concentration are potential important predictors of ecosystem transpiration and carbon uptake and consequently significantly contributed to increase in water use efficiency in communities with higher plant diversity.

  11. Comparative uptake and impact of TiO₂ nanoparticles in wheat and rapeseed.

    PubMed

    Larue, Camille; Veronesi, Giulia; Flank, Anne-Marie; Surble, Suzy; Herlin-Boime, Nathalie; Carrière, Marie

    2012-01-01

    Up to 2 million tons per year of titanium dioxide (TiO₂) nanoparticles (NP) are produced worldwide. This extensive production is postulated to result in release into the environment with subsequent contamination of soils and plants; however, few studies have examined TiO₂-NP uptake and impact on plants. In this study, wheat and rapeseed plantlets were exposed to 14 nm or 25 nm anatase TiO₂-NP in hydroponics conditions, either through root or leaf exposure. Microparticle-induced x-ray emission (μPIXE) coupled with Rutherford backscattering spectroscopy (RBS) was used to quantify absorbed titanium (Ti). Micro x-ray fluorescence (μXRF) based on synchrotron radiation was used to evaluate Ti distribution in roots and leaves. Our results show that both TiO₂-NP are accumulated in these plantlets upon root exposure and that Ti content is higher in rapeseed than wheat. Ti distribution in root cross sections depended on NP agglomeration state. NP are also accumulated in plantlets upon leaf exposure. Finally, it was found that TiO₂-NP exposure induced increased root elongation but did not affect germination, evapotranspiration, and plant biomass. Taken together, these results confirm that TiO₂-NP may be accumulated in plant crops but may only moderately impact plant development.

  12. Iron Uptake and Transport in Plants: The Good, the Bad, and the Ionome

    SciTech Connect

    Morrissey, J.; Guerinot, M

    2009-01-01

    Fe is essential for plant growth. At the same time, Fe is highly reactive and toxic via the Fenton reaction. Consequently, plants tightly control Fe homeostasis and react to Fe deficiency as well as Fe overload. The ability of plants to respond to Fe availability ultimately affects human nutrition, both in terms of crop yield and the Fe concentration of edible tissues. Thus, elucidating the mechanisms of Fe uptake and transport is essential for the breeding of crops that are more nutrient rich and more tolerant of Fe-limited soils.This review covers Fe transport and homeostasis in plants, focusing on the research published in the past five years. Because Fe transporters often have a broad range of substrates, we also examine the relationship between Fe and the toxic metals that often accompany Fe uptake, namely Cd, Co, and Ni. We begin by discussing Fe uptake into the root, then long-distance transport to the shoot, and finally, the loading of Fe into seeds. And, as Fe is essential to the metabolism of the mitochondria and chloroplast, we also look at the recent discoveries in Fe transport and homeostasis at the intracellular level. We do not cover the regulation of these transporters as this topic has been recently reviewed.

  13. A comparison of 90Sr and 137Cs uptake in plants via three pathways at two Chernobyl-contaminated sites.

    PubMed

    Malek, M A; Hinton, T G; Webb, S B

    2002-01-01

    Foliar absorption of resuspended 90Sr, root uptake and contamination adhering to leaf surfaces (i.e. soil loading) were compared at two Chernobyl-contaminated sites, Chistogalovka and Polesskoye. Although foliar absorption of resuspended 90Sr was quantifiable, its contribution amounted to less than 10% of the plants' total, above-ground contamination. Root uptake was 200 times greater than foliar absorption at the near-field site of Chistogalovka and eight times greater at Polesskoye, where the fallout consisted of the more soluble condensation-type, rather than fuel particles. Strontium's bioavailability exceeded that of 137Cs (analyzed in the same plants) by orders of magnitude when compared using concentration ratios. Simplistic, cumulative effective dose calculations for humans ingesting 90Sr- and 137Cs-contaminated plants revealed that the dose at Chistogalovka was greater from 90Sr (185 mSv vs. 3 mSv from 137Cs), while at Polesskoye the dose from 137Cs (66 mSv) was 30 times greater than from 90Sr (2 mSv). PMID:11814162

  14. Screening for bioactive metabolites in plant extracts modulating glucose uptake and fat accumulation.

    PubMed

    El-Houri, Rime B; Kotowska, Dorota; Olsen, Louise C B; Bhattacharya, Sumangala; Christensen, Lars P; Grevsen, Kai; Oksbjerg, Niels; Færgeman, Nils; Kristiansen, Karsten; Christensen, Kathrine B

    2014-01-01

    Dichloromethane and methanol extracts of seven different food and medicinal plants were tested in a screening platform for identification of extracts with potential bioactivity related to insulin-dependent glucose uptake and fat accumulation. The screening platform included a series of in vitro bioassays, peroxisome proliferator-activated receptor (PPAR) γ-mediated transactivation, adipocyte differentiation of 3T3-L1 cell cultures, and glucose uptake in both 3T3-L1 adipocytes and primary porcine myotubes, as well as one in vivo bioassay, fat accumulation in the nematode Caenorhabditis elegans. We found that dichloromethane extracts of aerial parts of golden root (Rhodiola rosea) and common elder (Sambucus nigra) as well as the dichloromethane extracts of thyme (Thymus vulgaris) and carrot (Daucus carota) were able to stimulate insulin-dependent glucose uptake in both adipocytes and myotubes while weekly activating PPARγ without promoting adipocyte differentiation. In addition, these extracts were able to decrease fat accumulation in C. elegans. Methanol extracts of summer savory (Satureja hortensis), common elder, and broccoli (Brassica oleracea) enhanced glucose uptake in myotubes but were not able to activate PPARγ, indicating a PPARγ-independent effect on glucose uptake. PMID:25254050

  15. Uptake of toluene and ethylbenzene by plants: removal of volatile indoor air contaminants.

    PubMed

    Sriprapat, Wararat; Suksabye, Parinda; Areephak, Sirintip; Klantup, Polawat; Waraha, Atcharaphan; Sawattan, Anuchit; Thiravetyan, Paitip

    2014-04-01

    Air borne uptake of toluene and ethylbenzene by twelve plant species was examined. Of the twelve plant species examined, the highest toluene removal was found in Sansevieria trifasciata, while the ethylbenzene removal from air was with Chlorophytum comosum. Toluene and ethylbenzene can penetrate the plant׳s cuticle. However, the removal rates do not appear to be correlated with numbers of stomata per plant. It was found that wax of S. trifasciata and Sansevieria hyacinthoides had greater absorption of toluene and ethylbenzene, and it contained high hexadecanoic acid. Hexadecanoic acid might be involved in toluene and ethylbenzene adsorption by cuticles wax of plants. Chlorophyll fluorescence analysis or the potential quantum yield of PSII (Fv/Fm) in toluene exposed plants showed no significant differences between the control and the treated plants, whereas plants exposed to ethylbenzene showed significant differences or those parameters, specifically in Dracaena deremensis (Lemon lime), Dracaena sanderiana, Kalanchoe blossfeldiana, and Cordyline fruticosa. The Fv/Fm ratio can give insight into the ability of plants to tolerate (indoor) air pollution by volatile organic chemicals (VOC). This index can be used for identification of suitable plants for treating/sequestering VOCs in contaminated air.

  16. Selective chemical binding enhances cesium tolerance in plants through inhibition of cesium uptake.

    PubMed

    Adams, Eri; Chaban, Vitaly; Khandelia, Himanshu; Shin, Ryoung

    2015-03-05

    High concentrations of cesium (Cs(+)) inhibit plant growth but the detailed mechanisms of Cs(+) uptake, transport and response in plants are not well known. In order to identify small molecules with a capacity to enhance plant tolerance to Cs(+), chemical library screening was performed using Arabidopsis. Of 10,000 chemicals tested, five compounds were confirmed as Cs(+) tolerance enhancers. Further investigation and quantum mechanical modelling revealed that one of these compounds reduced Cs(+) concentrations in plants and that the imidazole moiety of this compound bound specifically to Cs(+). Analysis of the analogous compounds indicated that the structure of the identified compound is important for the effect to be conferred. Taken together, Cs(+) tolerance enhancer isolated here renders plants tolerant to Cs(+) by inhibiting Cs(+) entry into roots via specific binding to the ion thus, for instance, providing a basis for phytostabilisation of radiocesium-contaminated farmland.

  17. Comparative uptake of uranium, thorium, and plutonium by biota inhabiting a contaminated Tennessee floodplain

    SciTech Connect

    Garten, C.T. Jr.; Bondietti, E.A.; Walker, R.L.

    1981-04-01

    The uptake of /sup 238/U, /sup 232/Th, and /sup 239/Pu from soil by fescue, grasshoppers, and small mammals was compared at the contaminated White Oak Creek floodplain in East Tennessee. Comparisons of actinide uptake were based on analyses of radionuclide ratios (U/Pu and Th/Pu) in soil and biota. U:Pu ratios in small mammal carcasses (shrews, mice, and rats) and bone samples from larger mammals (rabbit, woodchuck, opossum, and raccoon) were significantly greater (P less than or equal to 0.05) than U/Pu ratios in soil (based on 8M HNO/sub 3/ extractable). There was no significant difference between Th/Pu ratios in animals and soil. The order of actinide accumulation by biota from the site relative to contaminated soil was U > Th approx. = Pu.

  18. Plant water uptake at the single plant scale: experiment vs. model

    NASA Astrophysics Data System (ADS)

    Deery, D. M.; Passioura, J. B.; Condon, J.; Katupitiya, A.

    2008-12-01

    This study tested the hypotheses that the soil is the main resistance to the extraction of water by the plant roots, owing to a combination of low root length density (unit length of root per unit volume of soil), low soil water diffusivity at low soil water content. To test this hypothesis wheat plants were grown in undisturbed and repacked clay-loam and repacked sand. The plants were kept in a controlled environment where they were challenged with a range of evaporative demands, first rising and then falling, and the transpiration rate, E, and the null measurement of the xylem water potential, B, were measured non-destructively and continuously. The experimental measurements were compared to the output of a mathematical model that solves the radial diffusion equation for the flow of water to a single plant root, assumed to represent all roots. For the repacked clay-loam and the repacked sand, the model could match the data during the rising phase of E, if it was assumed that only 10% of the roots were taking up water and that the soil water diffusivity was constant and low. However it could not match the data during the falling phase of E, unless it was assumed that there had been a significant rise in the hydraulic resistance of the plant, or perhaps more likely, that an additional, yet constant, interfacial resistance had developed when E was high and B was rapidly increasing. That the slope of B(E) during the falling phase of E, for the repacked clay-loam and the repacked sand, was essentially constant suggests that the radial flow of water through the soil generated only minor gradients in soil suction and therefore that neither low soil water diffusivity nor low root length density was inhibiting the extraction of water from the soil by the plant roots. For the undisturbed clay-loam soil, the radial-flow model did not agree with the experimental data even when various combinations of soil water diffusivity and root length density were tried. This

  19. Uptake of galaxolide, tonalide, and triclosan by carrot, barley, and meadow fescue plants.

    PubMed

    Macherius, André; Eggen, Trine; Lorenz, Wilhelm Georg; Reemtsma, Thorsten; Winkler, Ursula; Moeder, Monika

    2012-08-15

    Many xenobiotics entering wastewater treatment plants are known to be persistent during wastewater treatment and tend to adsorb to sewage sludge. The application of sewage sludge as fertilizer in agriculture may pose the risk of an incorporation of xenobiotics in the cultivated plants and, finally, an inclusion into the food chain. This study was performed to investigate the uptake of common sewage sludge contaminants, galaxolide, tonalide, and triclosan, by plants used for human consumption and livestock feeding. Barley, meadow fescue, and four carrot cultivars were sown and grown in spiked soils under greenhouse conditions. After harvesting the plants, roots and leaves were analyzed separately, and the respective bioconcentration factors were calculated. In carrots, a concentration gradient of the xenobiotics became evident that decreased from the root peel via root core to the leaves. A significant influence of the differing root lipid contents on the uptake rates cannot be supported by our data, but the crucial influence of soil organic carbon content was confirmed. Barley and meadow fescue roots incorporated higher amounts of the target substances than carrots, but translocation into the leaves was negligible. The results indicated that an introduction of persistent semi- and nonpolar xenobiotics into the food chain via edible plants like carrots could be of certain relevance when sludge is applied as fertilizer. Due to low rates found for the translocation of the xenobiotics into the aerial plant parts, the entrance pathway into food products via feeding livestock is less probable.

  20. Nitrogen uptake, assimilation and remobilization in plants: challenges for sustainable and productive agriculture

    PubMed Central

    Masclaux-Daubresse, Céline; Daniel-Vedele, Françoise; Dechorgnat, Julie; Chardon, Fabien; Gaufichon, Laure; Suzuki, Akira

    2010-01-01

    Background Productive agriculture needs a large amount of expensive nitrogenous fertilizers. Improving nitrogen use efficiency (NUE) of crop plants is thus of key importance. NUE definitions differ depending on whether plants are cultivated to produce biomass or grain yields. However, for most plant species, NUE mainly depends on how plants extract inorganic nitrogen from the soil, assimilate nitrate and ammonium, and recycle organic nitrogen. Efforts have been made to study the genetic basis as well as the biochemical and enzymatic mechanisms involved in nitrogen uptake, assimilation, and remobilization in crops and model plants. The detection of the limiting factors that could be manipulated to increase NUE is the major goal of such research. Scope An overall examination of the physiological, metabolic, and genetic aspects of nitrogen uptake, assimilation and remobilization is presented in this review. The enzymes and regulatory processes manipulated to improve NUE components are presented. Results obtained from natural variation and quantitative trait loci studies are also discussed. Conclusions This review presents the complexity of NUE and supports the idea that the integration of the numerous data coming from transcriptome studies, functional genomics, quantitative genetics, ecophysiology and soil science into explanatory models of whole-plant behaviour will be promising. PMID:20299346

  1. A comparative study of water uptake by and transport through ionomeric fuel cell membranes

    SciTech Connect

    Zawodzinski, T.A.Jr.; Springer, T.E.; Davey, J.; Jestel, R.; Lopez, C.; Valerio, J.; Gottesfeld, S. . Electronics Materials and Device Research)

    1993-07-01

    Water uptake and transport parameters measured at 30 C for several available perfluorosulfonic acid membranes are compared. The water sorption characteristics, diffusion coefficient of water, electroosmotic drag, and protonic conductivity were determined for Nafion 117, Membrane C, and Dow XUS 13204.10 developmental fuel cell membrane. The diffusion coefficient and conductivity of each of these membranes were determined as functions of membrane water content. Experimental determination of transport parameters, enables one to compare membranes without the skewing effects of extensive features such as membrane thickness which contributes in a nonlinear fashion to performance in polymer electrolyte fuel cells.

  2. Tracking the diurnal signal of plant water uptake through the hydrologic system

    NASA Astrophysics Data System (ADS)

    Blume, Theresa; Hassler, Sibylle; Heidbüchel, Ingo; Weiler, Markus; Simard, Sonia; Güntner, Andreas; Heinrich, Ingo

    2015-04-01

    Plant water uptake during summer is characterized by strong diurnal fluctuations. As a result a diurnal sink term is imposed on catchment storage, affecting the unsaturated zone, sometimes the saturated zone and even streamflow. Detecting this signal and understanding its propagation through the hydrological system may help to better quantify eco-hydrological connectivity. The extent and strength of the propagation of this signal from plant to soil to ground- and stream water was investigated with a unique setup of 46 field sites in Luxemburg and 15 field sites in Germany. These sites cover a range of geologies, soils, topographies and types of vegetation. Vegetation types include grassland, pine forest (young and old) and different deciduous forest stands. Available data at all sites includes information at high temporal resolution from 3-5 soil moisture profiles, matrix potential, piezometers and sapflow sensors (as proxy for plant water uptake) as well as standard climate data. At sites with access to a stream, discharge or water level is also recorded. Signal strength (amplitude of diurnal fluctuations) can thus be traced through the system and gives an indication of the physical sphere of influence of plant water uptake i.e. the "eco-hydro-connectivity". Temporal dynamics of signal strength furthermore suggest a shifting spatial distribution of root water uptake with time. The analysis of time lags (or phase shifts) between daily fluctuations in temperature, radiation, sapflow, soil water, groundwater and streamflow gives further insights into the processes driving and propagating these signals and inter-site comparison allows for the investigation of local controls.

  3. Mercury uptake and phytotoxicity in terrestrial plants grown naturally in the Gumuskoy (Kutahya) mining area, Turkey.

    PubMed

    Sasmaz, Merve; Akgül, Bunyamin; Yıldırım, Derya; Sasmaz, Ahmet

    2016-01-01

    This study investigated mercury (Hg) uptake and transport from the soil to different plant parts by documenting the distribution and accumulation of Hg in the roots and shoots of 12 terrestrial plant species, all of which grow naturally in surface soils of the Gumuskoy Pb-Ag mining area. Plant samples and their associated soils were collected and analyzed for Hg content by ICP-MS. Mean Hg values in the soils, roots, and shoots of all plants were 6.914, 460, and 206 µg kg(-1), respectively and lower than 1. The mean enrichment factors for the roots (ECR) and shoots (ECS) of these plants were 0.06 and 0.09, respectively and lower than 1. These results show that the roots of the studied plants prevented Hg from reaching the aerial parts of the plants. The mean translocation factor (TLF) was 1.29 and higher than 1. The mean TLF values indicated that all 12 plant species had the ability to transfer Hg from the roots to the shoots but that transfer was more efficient in plants with higher ECR and ECS. Therefore, these plants could be useful for the biomonitoring of environmental pollution and for rehabilitating areas contaminated by Hg.

  4. Sudden cold temperature regulates the time-lag between plant CO2 uptake and release

    NASA Astrophysics Data System (ADS)

    Barthel, M.; Cieraad, E.; Zakharova, A.; Hunt, J. E.

    2013-11-01

    Since substrates for respiration are supplied mainly by recent photo-assimilates, there is a strong but time-lagged link between short-term above- and belowground carbon (C) cycling. However, regulation of this coupling by environmental variables is poorly understood. Whereas recent studies focussed on the effect of drought and shading on the link between above and belowground short-term C cycling, the effect of temperature remains unclear. We used a 13CO2 pulse-chase labelling experiment to investigate the effect of a sudden temperature change from 25 °C to 10 °C on the short-term coupling between assimilatory C uptake and respiratory loss. The study was done in the laboratory using two month old perennial rye-grass plants (plants at cold temperature invest relatively more carbon into respiration compared to growth or storage. These results increase our understanding of environmental controls on the link between short-term above- and belowground C cycling.

  5. [Uptake and accumulation characteristics of silicon and other nutritional elements in different age Phyllostachys praecox plants].

    PubMed

    Huang, Zhang-Ting; Jiang, Pei-Kun; Song, Zhao-Liang; Meng, Ci-Fu; Wu, Jia-Sen

    2013-05-01

    The samples of different age (1-4 years old) Phyllostachys praecox plants and their organs (leaf, branch, and culm) were collected from their main production area in Lin' an County, Zhejiang Province of East China to study the contents and the uptake and accumulation characteristics of silicon and other nutritional elements, as well as the interrelations between Si and other nutrient elements. In the P. praecox plants, the C content in aboveground part was in the order of culm > branch> leaf, whereas the Si, N, P, K, Ca, Mg, Al, Fe and Mn contents were in the order of leaf > branch > culm. Mn was mainly accumulated in leaf, while the other nine nutrient elements were mainly accumulated in the culm of 1-year old plants. The average Si content in the aboveground part of 3-4 year old plants was 13.66 g x kg(-1), suggesting that P. praecox belonged to Si accumulation plant. The leaf N, P, K, and Mg contents decreased, while the C, Al, and Mn contents increased with increasing plant age. The Si uptake by the aboveground part was mainly occurred in the second year (57.1%), while the N and K uptake was mainly in the first two years (67.7% - 93.7%). Thereafter, the N and K flowed out from the aboveground part, with the outflow rates reached 19.1% - 39.1% of the total accumulated amounts. The Si in P. praecox was significantly correlated with Ca, Al, and Mn, and negatively correlated with N, P, K, and Mg.

  6. Uptake of carbamazepine by cucumber plants--a case study related to irrigation with reclaimed wastewater.

    PubMed

    Shenker, Moshe; Harush, Daniella; Ben-Ari, Julius; Chefetz, Benny

    2011-02-01

    Reclaimed wastewater is an important source of irrigation in semiarid and arid zones. Here we report data on carbamazepine (CBZ) uptake by cucumber plants in hydroponic culture and greenhouse experiments using different soil types irrigated with fresh water or reclaimed wastewater. Data obtained from the hydroponic culture experiments suggest that CBZ is mainly translocated by water mass flow, and thus it is concentrated and accumulated to the largest extent in the mature/older leaves. Carbamazepine concentration in cucumber fruits and leaves was negatively correlated with soil organic matter content. The concentrations of CBZ in the roots and stems were relatively low, and most CBZ in the plant (76-84% of total uptake) was detected in the leaves. A greenhouse experiment using fresh water and reclaimed wastewater spiked, or not, with CBZ at 1 μg L(-1) (typical concentration in effluents) revealed that CBZ can be taken up and bioaccumulated from its background concentration in reclaimed wastewater. Bioaccumulation factor (calculated as the ratio of CBZ concentration in the plant to that in the soil solution) for the fruits (0.8-1) was significantly lower than the value calculated for the leaves (17-20). This study emphasizes the potential uptake of active pharmaceutical compounds by crops in organic-matter-poor soils irrigated with reclaimed wastewater and highlights the potential risks associated with this agricultural practice. PMID:21071061

  7. Veterinary antibiotics in animal waste, its distribution in soil and uptake by plants: A review.

    PubMed

    Tasho, Reep Pandi; Cho, Jae Yong

    2016-09-01

    Therapeutic and sub-therapeutic use of antibiotics in livestock farming is and has been, a common practice worldwide. These bioactive organic compounds have short retention period and partial uptake into the animal system. The uptake effects of this pharmaceutics, with plants as the primary focus, has not been reviewed so far. This review addresses three main concerns 1) the extensive use of veterinary antibiotics in livestock farming, 2) disposal of animal waste containing active biosolids and 3) effects of veterinary antibiotics in plants. Depending upon the plant species and the antibiotic used, the response can be phytotoxic, hormetic as well as mutational. Additionally, the physiological interactions that make the uptake of these compounds relatively easy have also been discussed. High water solubility, longer half-lives, and continued introduction make them relatively persistent in the environment. Lastly, some prevention measures that can help limit their impact on the environment have been reviewed. There are three methods of control: treatment of animal manure before field application, an alternative bio-agent for disease treatment and a well targeted legalized use of antibiotics. Limiting the movement of these biosolids in the environment can be a challenge because of their varying physiological interactions. Electron irradiation and supervised inoculation of beneficial microorganisms can be effective remediation strategies. Thus, extensive future research should be focused in this area. PMID:27139307

  8. How does altered precipitation and annual grass invasion affect plant N uptake in a native semi-arid shrub community?

    NASA Astrophysics Data System (ADS)

    Mauritz, M.; Lipson, D.; Cleland, E. E.

    2012-12-01

    concentrations are more variable in grasses which could indicate higher plasticity in grass N uptake compared to shrubs. Resin N supports the 15N patterns. Resin N declined more rapidly under grasses and was lower than under shrubs, presumably due to high grass N uptake. Resin N was particularly high under shrubs in wetter conditions indicating that shrubs could not take advantage of high N supply. Together the 15N and resin N patterns indicate that grasses accumulate more N and begin N uptake earlier in the season than shrubs. Although 15N did not differ in response to rainfall, invasion alters the distribution of N in the system. Rain was only manipulated for one growing season; multiple years of altered precipitation may yield significant differences. Early season N uptake by grasses, the low variability in shrub 15N and low shrub 15N in wetter conditions, despite high resin N, indicates that N competition between invasive grasses and native shrubs is weak. If N supply is sufficient for shrub demands, invasive grasses and shrubs could coexist. This study contributes to a broader understanding of how changes in resource supply, plant phenology and functional type interact and respond to climate change.

  9. Phytotoxicity, Uptake, and Translocation of Fluorescent Carbon Dots in Mung Bean Plants.

    PubMed

    Li, Wei; Zheng, Yinjian; Zhang, Haoran; Liu, Zulang; Su, Wei; Chen, Shi; Liu, Yingliang; Zhuang, Jianle; Lei, Bingfu

    2016-08-10

    Fluorescent carbon dots (CDs) have been widely studied in bioscience and bioimaging, but the effect of CDs on plants has been rarely studied. Herein, mung bean was adopted as a model plant to study the phytotoxicity, uptake, and translocation of red emissive CDs in plants. The incubation with CDs at a concentration range from 0.1 to 1.0 mg/mL induced physiological response of mung bean plant and imposed no phytotoxicity on mung bean growth. The lengths of the root and stem presented an increasing trend up to the treatment of 0.4 mg/mL. Confocal imaging showed that CDs were transferred from the roots to the stems and leaves by the vascular system through the apoplastic pathway. The uptake kinetics study was performed and demonstrated that the CDs were abundantly incubated by mung beans during both germination and growth periods. Furthermore, in vivo visualization of CDs provides potential for their successful application as delivery vehicles in plants based on the unique optical properties. PMID:27425200

  10. Phytotoxicity, Uptake, and Translocation of Fluorescent Carbon Dots in Mung Bean Plants.

    PubMed

    Li, Wei; Zheng, Yinjian; Zhang, Haoran; Liu, Zulang; Su, Wei; Chen, Shi; Liu, Yingliang; Zhuang, Jianle; Lei, Bingfu

    2016-08-10

    Fluorescent carbon dots (CDs) have been widely studied in bioscience and bioimaging, but the effect of CDs on plants has been rarely studied. Herein, mung bean was adopted as a model plant to study the phytotoxicity, uptake, and translocation of red emissive CDs in plants. The incubation with CDs at a concentration range from 0.1 to 1.0 mg/mL induced physiological response of mung bean plant and imposed no phytotoxicity on mung bean growth. The lengths of the root and stem presented an increasing trend up to the treatment of 0.4 mg/mL. Confocal imaging showed that CDs were transferred from the roots to the stems and leaves by the vascular system through the apoplastic pathway. The uptake kinetics study was performed and demonstrated that the CDs were abundantly incubated by mung beans during both germination and growth periods. Furthermore, in vivo visualization of CDs provides potential for their successful application as delivery vehicles in plants based on the unique optical properties.

  11. Uptake and metabolism of diclofenac in Typha latifolia--how plants cope with human pharmaceutical pollution.

    PubMed

    Bartha, Bernadett; Huber, Christian; Schröder, Peter

    2014-10-01

    The fate of pharmaceuticals in our environment is a very important issue for environmental and health research. Although these substances have been detected in environmental compartments in low concentration until now, they will pose considerable environmental risk to ecosystems, animals and human due to their biological activity. Alternative plant based removal technologies that make use of some potential wetland species like Phragmites or Typha within traditional wastewater treatment plants have to be established to cope with this "new generation" of pollutants. We investigated uptake and translocation of diclofenac (1mgl(-1)) in the macrophyte Typha latifolia L. during one week exposure in greenhouse experiments. Detoxification products and involved key enzymatic processes were identified. We also examined the oxidative stress induced by the treatment and the defense capacity of the plants. Rapid uptake and effective metabolism were observed, where glycoside and glutathione conjugates represent dominant metabolites. Up to seven-fold induction of glycosyltransferase activity was observed in roots, but not in shoots. Glutathione S-transferase activity was also induced, but to a lower extent. The activity changes of defense enzymes points to oxidative stress in the plants. Our results show that human pharmaceuticals can be metabolized by plants similar to xenobiotics, but that similarities to human metabolism are limited.

  12. Selenium uptake and volatilization from plants growing in soil. [Astragalus bisulcatus

    SciTech Connect

    Duckhart, E.C.; Waldron, L.J.; Donner, H.E. )

    1992-02-01

    Selenium volatilization rates from plants and soil confined in a closed transparent chamber varied greatly among five plant species over 3- to 6-day collection periods. Astragalus bisulcatus and broccoli showed the highest rates of volatilization, 1.7 and 1.1 {mu}g Se/kg dry soil/day, respectively. Volatilization rates for soil only, tomato, tall fescue, and alfalfa were 0.7, 0.5, 0.3, and 0.2 {mu}g/kg/day, respectively. Although it was not possible to separate plant and soil microbial volatilization, the large differences between plant species suggest a significant role for plants in Se volatilization from soils. Se(VI) added to soil as sodium selenate was rapidly taken up by all five plant types to the extent that plant uptake dominated Se removal from the soil. Volatilization accounted for only 0.5% (alfalfa) to 6.1% (Astragalus bis.) of the selenium lost from the soil. Although Astragalus had the highest tissue selenium concentration and selenium volatilization rates, it ranked fourth behind broccoli, tomato, and alfalfa in order of selenium removal because of its small biomass at 15 weeks. Alfalfa accumulated 22.1 {mu}g Se/g plant tissue from the Se(VI) amended soil, a concentration exceeded only by Astragalus (80.6) and broccoli (22.3). However, alfalfa had the lowest short-term net volatilization rate of the five plant types.

  13. Increased plant growth and copper uptake of host and non-host plants by metal-resistant and plant growth-promoting endophytic bacteria.

    PubMed

    Sun, Leni; Wang, Xiaohan; Li, Ya

    2016-01-01

    The effects of inoculation with two metal-resistant and plant growth-promoting endophytic bacteria (Burkholderia sp. GL12 and Bacillus megaterium JL35) were evaluated on the plant growth and Cu uptake in their host Elsholtzia splendens and non-host Brassica napus plants grown in natural Cu-contaminated soil. The two strains showed a high level of ACC deaminase activities. In pot experiments, inoculation with strain GL12 significantly increased root and above-ground tissue dry weights of both plants, consequently increasing the total Cu uptake of E. splendens and Brassica napus by 132% and 48.2% respectively. Inoculation with strain JL35 was found to significantly increase not only the biomass of B. napus, consequently increasing the total Cu uptake of B. napus by 31.3%, but Cu concentration of E. splendens for above-ground tissues by 318% and roots by 69.7%, consequently increasing the total Cu uptake of E. splendens by 223%. The two strains could colonize the rhizosphere soils and root interiors of both plants. Notably, strain JL35 could colonize the shoot tissues and significantly increase the translocation factors and bioaccumulation factors of E. splendens. These results suggested that Burkholderia sp. GL12 and B. megaterium JL35 were valuable bacterial resource which had the potential in improving the efficiency of Cu phytoextraction by E. splendens and B. napus in a natural Cu-contaminated soil.

  14. Increased plant growth and copper uptake of host and non-host plants by metal-resistant and plant growth-promoting endophytic bacteria.

    PubMed

    Sun, Leni; Wang, Xiaohan; Li, Ya

    2016-01-01

    The effects of inoculation with two metal-resistant and plant growth-promoting endophytic bacteria (Burkholderia sp. GL12 and Bacillus megaterium JL35) were evaluated on the plant growth and Cu uptake in their host Elsholtzia splendens and non-host Brassica napus plants grown in natural Cu-contaminated soil. The two strains showed a high level of ACC deaminase activities. In pot experiments, inoculation with strain GL12 significantly increased root and above-ground tissue dry weights of both plants, consequently increasing the total Cu uptake of E. splendens and Brassica napus by 132% and 48.2% respectively. Inoculation with strain JL35 was found to significantly increase not only the biomass of B. napus, consequently increasing the total Cu uptake of B. napus by 31.3%, but Cu concentration of E. splendens for above-ground tissues by 318% and roots by 69.7%, consequently increasing the total Cu uptake of E. splendens by 223%. The two strains could colonize the rhizosphere soils and root interiors of both plants. Notably, strain JL35 could colonize the shoot tissues and significantly increase the translocation factors and bioaccumulation factors of E. splendens. These results suggested that Burkholderia sp. GL12 and B. megaterium JL35 were valuable bacterial resource which had the potential in improving the efficiency of Cu phytoextraction by E. splendens and B. napus in a natural Cu-contaminated soil. PMID:26587767

  15. Plant Nitrogen Acquisition Under Low Availability: Regulation of Uptake and Root Architecture

    PubMed Central

    Kiba, Takatoshi; Krapp, Anne

    2016-01-01

    Nitrogen availability is a major factor determining plant growth and productivity. Plants acquire nitrogen nutrients from the soil through their roots mostly in the form of ammonium and nitrate. Since these nutrients are scarce in natural soils, plants have evolved adaptive responses to cope with the environment. One of the most important responses is the regulation of nitrogen acquisition efficiency. This review provides an update on the molecular determinants of two major drivers of the nitrogen acquisition efficiency: (i) uptake activity (e.g. high-affinity nitrogen transporters) and (ii) root architecture (e.g. low-nitrogen-availability-specific regulators of primary and lateral root growth). Major emphasis is laid on the regulation of these determinants by nitrogen supply at the transcriptional and post-transcriptional levels, which enables plants to optimize nitrogen acquisition efficiency under low nitrogen availability. PMID:27025887

  16. Plant Nitrogen Acquisition Under Low Availability: Regulation of Uptake and Root Architecture.

    PubMed

    Kiba, Takatoshi; Krapp, Anne

    2016-04-01

    Nitrogen availability is a major factor determining plant growth and productivity. Plants acquire nitrogen nutrients from the soil through their roots mostly in the form of ammonium and nitrate. Since these nutrients are scarce in natural soils, plants have evolved adaptive responses to cope with the environment. One of the most important responses is the regulation of nitrogen acquisition efficiency. This review provides an update on the molecular determinants of two major drivers of the nitrogen acquisition efficiency: (i) uptake activity (e.g. high-affinity nitrogen transporters) and (ii) root architecture (e.g. low-nitrogen-availability-specific regulators of primary and lateral root growth). Major emphasis is laid on the regulation of these determinants by nitrogen supply at the transcriptional and post-transcriptional levels, which enables plants to optimize nitrogen acquisition efficiency under low nitrogen availability.

  17. Rhizosphere Microbial Community Composition Affects Cadmium and Zinc Uptake by the Metal-Hyperaccumulating Plant Arabidopsis halleri

    PubMed Central

    Muehe, E. Marie; Weigold, Pascal; Adaktylou, Irini J.; Planer-Friedrich, Britta; Kraemer, Ute; Kappler, Andreas

    2015-01-01

    The remediation of metal-contaminated soils by phytoextraction depends on plant growth and plant metal accessibility. Soil microorganisms can affect the accumulation of metals by plants either by directly or indirectly stimulating plant growth and activity or by (im)mobilizing and/or complexing metals. Understanding the intricate interplay of metal-accumulating plants with their rhizosphere microbiome is an important step toward the application and optimization of phytoremediation. We compared the effects of a “native” and a strongly disturbed (gamma-irradiated) soil microbial communities on cadmium and zinc accumulation by the plant Arabidopsis halleri in soil microcosm experiments. A. halleri accumulated 100% more cadmium and 15% more zinc when grown on the untreated than on the gamma-irradiated soil. Gamma irradiation affected neither plant growth nor the 1 M HCl-extractable metal content of the soil. However, it strongly altered the soil microbial community composition and overall cell numbers. Pyrosequencing of 16S rRNA gene amplicons of DNA extracted from rhizosphere samples of A. halleri identified microbial taxa (Lysobacter, Streptomyces, Agromyces, Nitrospira, “Candidatus Chloracidobacterium”) of higher relative sequence abundance in the rhizospheres of A. halleri plants grown on untreated than on gamma-irradiated soil, leading to hypotheses on their potential effect on plant metal uptake. However, further experimental evidence is required, and wherefore we discuss different mechanisms of interaction of A. halleri with its rhizosphere microbiome that might have directly or indirectly affected plant metal accumulation. Deciphering the complex interactions between A. halleri and individual microbial taxa will help to further develop soil metal phytoextraction as an efficient and sustainable remediation strategy. PMID:25595759

  18. Aridity and plant uptake interact to make dryland soils hotspots for nitric oxide (NO) emissions.

    PubMed

    Homyak, Peter M; Blankinship, Joseph C; Marchus, Kenneth; Lucero, Delores M; Sickman, James O; Schimel, Joshua P

    2016-05-10

    Nitric oxide (NO) is an important trace gas and regulator of atmospheric photochemistry. Theory suggests moist soils optimize NO emissions, whereas wet or dry soils constrain them. In drylands, however, NO emissions can be greatest in dry soils and when dry soils are rewet. To understand how aridity and vegetation interact to generate this pattern, we measured NO fluxes in a California grassland, where we manipulated vegetation cover and the length of the dry season and measured [δ(15)-N]NO and [δ(18)-O]NO following rewetting with (15)N-labeled substrates. Plant N uptake reduced NO emissions by limiting N availability. In the absence of plants, soil N pools increased and NO emissions more than doubled. In dry soils, NO-producing substrates concentrated in hydrologically disconnected microsites. Upon rewetting, these concentrated N pools underwent rapid abiotic reaction, producing large NO pulses. Biological processes did not substantially contribute to the initial NO pulse but governed NO emissions within 24 h postwetting. Plants acted as an N sink, limiting NO emissions under optimal soil moisture. When soils were dry, however, the shutdown in plant N uptake, along with the activation of chemical mechanisms and the resuscitation of soil microbial processes upon rewetting, governed N loss. Aridity and vegetation interact to maintain a leaky N cycle during periods when plant N uptake is low, and hydrologically disconnected soils favor both microbial and abiotic NO-producing mechanisms. Under increasing rates of atmospheric N deposition and intensifying droughts, NO gas evasion may become an increasingly important pathway for ecosystem N loss in drylands.

  19. Aridity and plant uptake interact to make dryland soils hotspots for nitric oxide (NO) emissions.

    PubMed

    Homyak, Peter M; Blankinship, Joseph C; Marchus, Kenneth; Lucero, Delores M; Sickman, James O; Schimel, Joshua P

    2016-05-10

    Nitric oxide (NO) is an important trace gas and regulator of atmospheric photochemistry. Theory suggests moist soils optimize NO emissions, whereas wet or dry soils constrain them. In drylands, however, NO emissions can be greatest in dry soils and when dry soils are rewet. To understand how aridity and vegetation interact to generate this pattern, we measured NO fluxes in a California grassland, where we manipulated vegetation cover and the length of the dry season and measured [δ(15)-N]NO and [δ(18)-O]NO following rewetting with (15)N-labeled substrates. Plant N uptake reduced NO emissions by limiting N availability. In the absence of plants, soil N pools increased and NO emissions more than doubled. In dry soils, NO-producing substrates concentrated in hydrologically disconnected microsites. Upon rewetting, these concentrated N pools underwent rapid abiotic reaction, producing large NO pulses. Biological processes did not substantially contribute to the initial NO pulse but governed NO emissions within 24 h postwetting. Plants acted as an N sink, limiting NO emissions under optimal soil moisture. When soils were dry, however, the shutdown in plant N uptake, along with the activation of chemical mechanisms and the resuscitation of soil microbial processes upon rewetting, governed N loss. Aridity and vegetation interact to maintain a leaky N cycle during periods when plant N uptake is low, and hydrologically disconnected soils favor both microbial and abiotic NO-producing mechanisms. Under increasing rates of atmospheric N deposition and intensifying droughts, NO gas evasion may become an increasingly important pathway for ecosystem N loss in drylands. PMID:27114523

  20. Dissolved cerium contributes to uptake of Ce in the presence of differently sized CeO2-nanoparticles by three crop plants.

    PubMed

    Schwabe, Franziska; Tanner, Simon; Schulin, Rainer; Rotzetter, Aline; Stark, Wendelin; von Quadt, Albrecht; Nowack, Bernd

    2015-03-01

    We investigated the uptake of cerium (Ce) dioxide nanoparticles (NPs) by hydroponically grown wheat, pumpkin and sunflower plants. The presence of plant roots in nutrient solution led to a substantial increase in the dissolution of CeO2-NP compared to plant-free medium. Experiments with Zr/CeOx-NP revealed that Ce was not only taken up in the form of NPs, but simultaneously to a significant degree also as dissolved Ce(iii) ions, which then re-precipitated in the form of CeO2-NPs inside the leaves. The contribution of dissolved Ce uptake was particularly large for particles smaller than 10 nm due to their higher dissolution rate. Our data also indicate that the translocation of Ce resulting from NP-root-exposure is species dependent. When Ce was supplied as dissolved ions, sunflower had the highest capacity of Ce-ion accumulation inside the leaves, while there was no significant difference between pumpkin and wheat. We found no Ce translocation from roots into shoots when only NPs bigger than 20 nm were applied. This study highlights that plant root activity can have a significant impact on the dissolution of CeO2-NPs in soil solution and that uptake of dissolved Ce(iii) followed by re-precipitation needs to be considered as an important pathway in studies of CeO2-NP uptake by plants. PMID:25634091

  1. Plant uptake of depleted uranium from manure-amended and citrate treated soil.

    PubMed

    Sevostianova, Elena; Lindemann, William C; Ulery, April L; Remmenga, Marta D

    2010-08-01

    Six plant species were tested for their ability to accumulate depleted uranium in their above-ground biomass from deployed munitions contaminated soil in New Mexico. In greenhouse experiments, Kochia (Kochia scoparia L. Schrad.) and pigweed (Amaranthus retroflexus L) were grown with steer manure added at rates of 22.4, 44.8, and 89.6 Mg ha(-1). Citric acid and glyphosate (N-(phosphonomethyl) glycine) applied at the end of the growing season increased DU concentrations from 2.5 to 17 times. Leaf and stem DU concentrations in kochia increased from 17.0 to 41.9 mg kg(-1) and from 3.5 to 18.0 mg kg(-1), respectively. In pigweed, leaf and stem DU concentrations increased from 1.0 to 17.3 and from 1.0 to 4.7 mg kg(-1), respectively. Manure generally decreased or had no effect on DU uptake. The effect of citric acid and ammonium citrate on DU uptake by kochia, sunflower (Helianthus annuus L), and sweet corn (Zea mays L) was also studied. Ammonium citrate was just as effective in enhancing DU uptake as citric acid. This implies that the citrate ion is more important in DU uptake and translocation than the solubilization of DU through acidification. In both experiments, leaves had higher DU concentrations than stems. PMID:21166280

  2. The arbuscular mycorrhizal fungus Glomus mosseae can enhance arsenic tolerance in Medicago truncatula by increasing plant phosphorus status and restricting arsenate uptake.

    PubMed

    Xu, Pengliang; Christie, Peter; Liu, Yu; Zhang, Junling; Li, Xiaolin

    2008-11-01

    A pot experiment examined the biomass and As uptake of Medicago truncatula colonized by the arbuscular mycorrhizal (AM) fungus Glomus mosseae in low-P soil experimentally contaminated with different levels of arsenate. The biomass of G. mosseae external mycelium was unaffected by the highest addition level of As studied (200 mg kg(-1)) but shoot and root biomass declined in both mycorrhizal and non-mycorrhizal plants, indicating that the AM fungus was more tolerant than M. truncatula to arsenate. Mycorrhizal inoculation increased shoot and root dry weights by enhancing host plant P nutrition and lowering shoot and root As concentrations compared with uninoculated plants. The AM fungus may have been highly tolerant to As and conferred enhanced tolerance to arsenate on the host plant by enhancing P nutrition and restricting root As uptake.

  3. Effects of amendments on the uptake and distribution of DDT in Cucurbita pepo ssp pepo plants.

    PubMed

    Whitfield Aslund, Melissa L; Lunney, Alissa I; Rutter, Allison; Zeeb, Barbara A

    2010-02-01

    The effects of soil amendments on the phytoextraction of summation operatorDDT (DDT + DDD + DDE) from soil ([ summation operatorDDT] approximately 1500 ng/g) by a pumpkin variety of Cucurbita pepo ssp pepo were tested and the patterns of summation operatorDDT storage throughout the plant shoot were examined. The soil amendments did not increase the total amount of summation operatorDDT extracted into plant shoots, but new information about summation operatorDDT distribution in the plants was obtained. As observed previously, the summation operatorDDT concentration in plant leaves (mean 290 ng/g) was significantly lower than in plant stems (mean 2600 ng/g). Further analysis revealed that summation operatorDDT composition was consistent throughout the plant shoot and that summation operatorDDT concentration in leaves and stems decreased exponentially as distance from the root increased, which was previously unknown. This new information about the patterns of summation operatorDDT uptake and translocation within pumpkin plants highlights the need for appropriate plant sampling strategies in future POPs phytoextraction research.

  4. Nitrogen dioxide (NO2) uptake by vegetation controlled by atmospheric concentrations and plant stomatal aperture

    NASA Astrophysics Data System (ADS)

    Chaparro-Suarez, I. G.; Meixner, F. X.; Kesselmeier, J.

    2011-10-01

    Nitrogen dioxide (NO2) exchange between the atmosphere and five European tree species was investigated in the laboratory using a dynamic branch enclosure system (consisting of two cuvettes) and a highly specific NO2 analyzer. NO2 measurements were performed with a sensitive gas phase chemiluminescence NO detector combined with a NO2 specific (photolytic) converter, both from Eco-Physics (Switzerland). This highly specific detection system excluded bias from other nitrogen compounds. Investigations were performed at two light intensities (Photosynthetic Active Radiation, PAR, 450 and 900 μmol m-2 s-1) and NO2 concentrations between 0 and 5 ppb. Ambient parameters (air temperature and relative humidity) were held constant. The data showed dominant NO2 uptake by the respective tree species under all conditions. The results did not confirm the existence of a compensation point within a 95% confidence level, though we cannot completely exclude emission of NO2 under very low atmospheric concentrations. Induced stomatal stricture, or total closure, by changing light conditions, as well as by application of the plant hormone ABA (Abscisic Acid) caused a corresponding decrease of NO2 uptake. No loss of NO2 to plant surfaces was observed under stomatal closure and species dependent differences in uptake rates could be clearly related to stomatal behavior.

  5. Silicon modifies root anatomy, and uptake and subcellular distribution of cadmium in young maize plants

    PubMed Central

    Vaculík, Marek; Landberg, Tommy; Greger, Maria; Luxová, Miroslava; Stoláriková, Miroslava; Lux, Alexander

    2012-01-01

    Background and Aims Silicon (Si) has been shown to ameliorate the negative influence of cadmium (Cd) on plant growth and development. However, the mechanism of this phenomenon is not fully understood. Here we describe the effect of Si on growth, and uptake and subcellular distribution of Cd in maize plants in relation to the development of root tissues. Methods Young maize plants (Zea mays) were cultivated for 10 d hydroponically with 5 or 50 µm Cd and/or 5 mm Si. Growth parameters and the concentrations of Cd and Si were determined in root and shoot by atomic absorption spectrometry or inductively coupled plasma mass spectroscopy. The development of apoplasmic barriers (Casparian bands and suberin lamellae) and vascular tissues in roots were analysed, and the influence of Si on apoplasmic and symplasmic distribution of 109Cd applied at 34 nm was investigated between root and shoot. Key Results Si stimulated the growth of young maize plants exposed to Cd and influenced the development of Casparian bands and suberin lamellae as well as vascular tissues in root. Si did not affect the distribution of apoplasmic and symplasmic Cd in maize roots, but considerably decreased symplasmic and increased apoplasmic concentration of Cd in maize shoots. Conclusions Differences in Cd uptake of roots and shoots are probably related to the development of apoplasmic barriers and maturation of vascular tissues in roots. Alleviation of Cd toxicity by Si might be attributed to enhanced binding of Cd to the apoplasmic fraction in maize shoots. PMID:22455991

  6. Comparative uptake of trace elements in vines and olive trees over calcareous soils in western La Mancha

    NASA Astrophysics Data System (ADS)

    Ángel Amorós, José; Higueras, Pablo; Pérez-de-los-Reyes, Caridad; Jesús García, Francisco; Villaseñor, Begoña; Bravo, Sandra; Losilla, María Luisa; María Moreno, Marta

    2014-05-01

    Grapevine (Vitis vinifera L.) and olive-tree (Olea europea L.) are very important cultures in Castilla-La Mancha for its extension and contribution to the regional economy. This study was carried out in the municipality of Carrión de Calatrava (Ciudad Real) where the variability of soils of different geological origin, with different evolutions giving a great diversity of soils. The metabolism of trace elements in plants has been extensively studied although each soil-plant system must be investigated, especially since small variations in composition can lead to marked differences. It can be stated that the composition of the plant reflects the environment where it is cultivated and the products of the plant (leaves, fruits, juices, etc…) will be influenced by the composition of the soil. The main aim of the work was to compare the uptake of 24 trace elements in grapevine and olive-tree cultivated in the same soil. Samples from surface soils and plant material (leaf) have been analyzed by X-ray fluorescence, obtaining trace elements in mg/kg. It can be concluded that the leaves of grapevines in the studied plots have shown content in elements: -Similar to the olive-tree in case of: Co, Ga, Y, Ta, Th, U y Nd. -Over to the olive-tree in: Sc, V, Cr, Ni, Rb, Sr, Zr, Nb, Ba, La, Ce, Hf y W. -Below to the olive-tree in: Cu, Zn, Cs y Pb. Keywords: woody culture soils, mineral nutrition, X-ray fluorescence.

  7. Root and foliar uptake, translocation, and distribution of [14C] fluoranthene in pea plants (Pisum sativum).

    PubMed

    Zezulka, Stěpán; Klemš, Marek; Kummerová, Marie

    2014-10-01

    Uptake of (14)C-labeled fluoranthene ([(14)C]FLT) via both roots and leaves of Pisum sativum seedlings and distribution of [(14) C] in plants by both acropetal and basipetal transport was evaluated. The highest [(14)C] level was found in the root base (≈270 × 10(4) dpm/g dry wt) and the lowest level in the stem apex (<2 × 10(4) dpm/g dry wt) after just 2 h of root exposure. For foliar uptake, the highest level of [(14)C] was found in the stem and root apex (both ≈2 × 10(4) dpm/g dry wt) (except for treated leaves), while the lowest level was found in the root base (<0.6 × 10(4) dpm/g dry wt).

  8. Stimulation of Cadmium Uptake in Relation to the Cadmium Content of Plants 1

    PubMed Central

    Petit, Charles M.; Ringoet, Arthur; Myttenaere, Constant

    1978-01-01

    The time course of cadmium uptake by the roots of intact tomato plants (Lycopersicon esculentum Mill.) was measured in a nutrient solution with a micromolar cadmium concentration until all cadmium in the medium was exhausted. Exhaustion taking a few hours, cadmium was repeatedly added to the nutrient solution. The initial rate of cadmium uptake was computed for each cadmium addition. This rate sharply increased and ultimately leveled off, the maximum value being about three times higher than the value measured after the first cadmium addition. The stimulating effect of cadmium was associated with an inhibitory effect at higher levels of cadmium concentrations. An increase in the net cadmium influx with time could not be explained by the binding of heavy metal to a fixed number of organic compounds. Conceivably, the production of binding sites could be increased and cadmium might play a part in controlling the rate of sites production. PMID:16660557

  9. Arbuscular mycorrhizal fungal hyphae contribute to the uptake of polycyclic aromatic hydrocarbons by plant roots.

    PubMed

    Gao, Yanzheng; Cheng, Zhaoxia; Ling, Wanting; Huang, Jing

    2010-09-01

    The arbuscular mycorrhizal (AM) hyphae-mediated uptake of polycyclic aromatic hydrocarbons (PAHs) by the roots of ryegrass (Lolium multiflorum Lam.) was investigated using three-compartment systems. Glomus mosseae and Glomus etunicatum were chosen, and fluorene and phenanthrene were used as representative PAHs. When roots were grown in un-spiked soils, AM hyphae extended into PAH-spiked soil and clearly absorbed and transported PAHs to roots, resulting in high concentrations of fluorene and phenanthrene in roots. This was further confirmed by the batch equilibration experiment, which revealed that the partition coefficients (K(d)) of tested PAHs by mycorrhizal hyphae were 270-356% greater than those by roots, suggesting the great potential of hyphae to absorb PAHs. Because of fluorene's lower molecular weight and higher water solubility, its translocation by hyphae was greater than that of phenanthrene. These results provide new perspectives on the AM hyphae-mediated uptake by plants of organic contaminants from soil. PMID:20403686

  10. Major factors influencing cadmium uptake from the soil into wheat plants.

    PubMed

    Liu, Ke; Lv, Jialong; He, Wenxiang; Zhang, Hong; Cao, Yingfei; Dai, Yunchao

    2015-03-01

    At present, soil quality standards for agriculture have not been improved for many years and are applied uniformly for a diverse variety of crops and different soil types, not fully considering the effects of soil properties on cadmium (Cd) uptake via soil-plant transfer. In this study, the characteristics of Cd transfer from soil to eight wheat varieties were investigated, and the results showed that Xiaoyan 22 was moderately sensitive to Cd. Upon growing Xiaoyan 22 in 18 different Chinese soils, we studied the major controlling factors of Cd transfer and constructed a bioaccumulation prediction model from the soil properties. The results showed that pH was the most important factor contributing to Cd uptake. After calibration for the eight wheat varieties, a continuous soil threshold model for wheat was derived for the species sensitive distribution based on food safety standards.

  11. Effects of VA mycorrhiza formation on plant nitrogen uptake and rhizosphere bacteria

    SciTech Connect

    Ames, R.N.

    1983-01-01

    Mycorrhizal and nonmycorrhizal sorghum plants were grown in pots at three levels of fertilizer nitrogen ((NH/sub 4/)/sub 2/SO/sub 4/) which had been enriched with /sup 15/N. Root colonization by Glomus mosseae did not affect plant growth or total N uptake, but significant reductions in mycorrhizal plant /sup 15/N:/sup 14/N ratios and increased 'A' values were found. This suggested that mycorrhizal plants had access to an N source which was less available to nonmycorrhizal plants. In two additional experiments, mycorrhizal and nonmycorrhizal celery plants were grown in pots which allowed VAM fungal hyphae, but not roots, to have direct access to /sup 15/N-enriched organic or inorganic N sources. Root dry weight was significantly reduced in mycorrhizal plants. Mycorrhizal plants had significantly greater shoot and root /sup 15/N content than nonmycorrhizal plants. Number and length of VAM fungal hyphae crossing into the area of /sup 15/N placement were positively correlated with mycorrhizal plant /sup 15/N content in the inorganic-N but not organic-N treatment. In a fourth experiment, the effect of G. mosseae on the rhizosphere populations of five bacterial isolates associated with blue grama (Bouteloua gracilis) was examined. No significant differences in bacterial populations were found in nonrhizosphere soil samples from pots of mycorrhizal and nonmycorrhizal plants. One bacterial isolate was significantly increased in number, while a different isolate and total bacterial populations were significantly reduced by the presence of the mycorrhizal fungus. The results suggest that root colonization by VAM fungi can alter rhizosphere bacterial populations.

  12. Is nutrient uptake by plant roots sensitive to the rate of mass flow? Reappraisal of an old chestnut for spatially distributed root systems

    NASA Astrophysics Data System (ADS)

    McMurtrie, R. E.; Näsholm, T.

    2015-12-01

    Numerous modelling papers have considered the contribution of mass flow to nutrient uptake by a single plant root, but few have evaluated its contribution at the scale of an entire root system. We derive equations for nitrogen (N) influx per unit root surface area (J) and N uptake by a single root (U) as functions of soil nitrogen supply, root-length density (RLD) and the velocity of water at the root surface (vo). This model of N uptake by a single root can be used to evaluate N uptake by an entire root system if spatial distributions are known for soil N supply, root biomass and water-uptake velocity. In this paper we show that spatial distributions of RLD and vo can be estimated simultaneously under an optimisation hypothesis (MaxNup, McMurtrie et al. 2012), according to which total root mass and total water uptake are distributed vertically in order to maximise total N uptake. The MaxNup hypothesis leads to equations for optimal vertical profiles of RLD, vo, J and U, maximum rooting depth and the fraction of total available soil nitrogen taken up by the root system. Predicted values of vo are enhanced at depths where nitrogen influx per unit root surface area (J) is more sensitive to vo and diminished at depths where J is less sensitive to vo. Predicted vo is largest at the base of the root system where RLD is lowest, and is smallest in upper soil layers where RLD is highest. MaxNup thus predicts that water uptake will be distributed preferentially to soil depths where it will enhance nitrogen uptake U; this tendency will amplify the sensitivity of total N uptake to total water uptake, compared with strategies where vo is the same for all roots, or where vo is elevated for roots in upper soil layers. Reference McMurtrie RE, Iversen CM, Dewar RC, Medlyn BE, Näsholm T, Pepper DA, Norby RJ. 2012. Plant root distributions and nitrogen uptake predicted by a hypothesis of optimal root foraging. Ecology and Evolution 2: 1235-1250.

  13. Recently fixed carbon allocation in strawberry plants and concurrent inorganic nitrogen uptake through arbuscular mycorrhizal fungi.

    PubMed

    Tomè, Elisabetta; Tagliavini, Massimo; Scandellari, Francesca

    2015-05-01

    Most crop species form a symbiotic association with arbuscular mycorrhizal (AM) fungi, receiving plant photosynthate and exchanging nutrients from the soil. The plant carbon (C) allocation to AM fungi and the nitrogen feedback are rarely studied together. In this study, a dual (13)CO2 and (15)NH4(15)NO3 pulse labeling experiment was carried out to determine the allocation of recent photosynthates to mycorrhizal hyphae and the translocation of N absorbed by hyphae to strawberry plants. Plants were grown in pots in which a 50 μm mesh net allowed the physical separation of the mycorrhizal hyphae from the roots in one portion of the pot. An inorganic source of (15)N was added to the hyphal compartment at the same time of the (13)CO2 pulse labeling. One and seven days after pulse labeling, the plants were destructively harvested and the amount of the recently fixed carbon (C) and of the absorbed N was determined. (13)C allocated to belowground organs such as roots and mycorrhizal hyphae accounted for an average of 10%, with 4.3% allocated to mycorrhizal hyphae within the first 24h after the pulse labeling. Mycorrhizae absorbed labeled inorganic nitrogen, of which almost 23% was retained in the fungal mycelium. The N uptake was linearly correlated with the (13)C fixed by the plants suggesting a positive correlation between a plant photosynthetic rate and the hyphal absorption capacity. PMID:25841208

  14. Mathematical modelling of the uptake and transport of salt in plant roots.

    PubMed

    Foster, Kylie J; Miklavcic, Stanley J

    2013-11-01

    In this paper, we present and discuss a mathematical model of ion uptake and transport in roots of plants. The underlying physical model of transport is based on the mechanisms of forced diffusion and convection. The model can take account of local variations in effective ion and water permeabilities across the major tissue regions of plant roots, represented through a discretized coupled system of governing equations including mass balance, forced diffusion, convection and electric potential. We present simulation results of an exploration of the consequent enormous parameter space. Among our findings we identify the electric potential as a major factor affecting ion transport across, and accumulation in, root tissues. We also find that under conditions of a constant but realistic level of bulk soil salt concentration and plant-soil hydraulic pressure, diffusion plays a significant role even when convection by the water transpiration stream is operating.

  15. Phytoremediation of Metal Contaminated Soil Using Willow: Exploiting Plant-Associated Bacteria to Improve Biomass Production and Metal Uptake.

    PubMed

    Janssen, Jolien; Weyens, Nele; Croes, Sarah; Beckers, Bram; Meiresonne, Linda; Van Peteghem, Pierre; Carleer, Robert; Vangronsveld, Jaco

    2015-01-01

    Short rotation coppice (SRC) of willow and poplar is proposed for economic valorization and concurrently as remediation strategy for metal contaminated land in northeast-Belgium. However, metal phytoextraction appears insufficient to effectuate rapid reduction of soil metal contents. To increase both biomass production and metal accumulation of SRC, two strategies are proposed: (i) in situ selection of the best performing clones and (ii) bioaugmentation of these clones with beneficial plant-associated bacteria. Based on field data, two experimental willow clones, a Salix viminalis and a Salix alba x alba clone, were selected. Compared to the best performing commercial clones, considerable increases in stem metal extraction were achieved (up to 74% for Cd and 91% for Zn). From the selected clones, plant-associated bacteria were isolated and identified. All strains were subsequently screened for their plant growth-promoting and metal uptake enhancing traits. Five strains were selected for a greenhouse inoculation experiment with the selected clones planted in Cd-Zn-Pb contaminated soil. Extraction potential tended to increase after inoculation of S. viminalis plants with a Rahnella sp. strain due to a significantly increased twig biomass. However, although bacterial strains showing beneficial traits in vitro were used for inoculation, increments in extraction potential were not always observed.

  16. A New Oidiodendron maius Strain Isolated from Rhododendron fortunei and its Effects on Nitrogen Uptake and Plant Growth

    PubMed Central

    Wei, Xiangying; Chen, Jianjun; Zhang, Chunying; Pan, Dongming

    2016-01-01

    A new mycorrhizal fungal strain was isolated from hair roots of Rhododendron fortunei Lindl. grown in Huading Forest Park, Zhejiang Province, China. Morphological characterization and internal transcribed spacer rDNA analysis suggested that it belongs to Oidiodendron maius Barron, and we designated it as strain Om19. Methods for culturing Om19 were established, and the ability of Om19 to form mycorrhizae on R. fortunei was evaluated in a peat-based substrate. Microscopic observations showed hyaline hyphae on the surface of hair roots and crowded hyphal complexes (hyphal coils) inside root cortical cells of R. fortunei after inoculation, indicating that the roots were well colonized by Om19. In a second experiment, fresh and dry weight of R. fortunei 2 months after Om19 inoculation were greater than uninoculated plants, and the total nitrogen absorbed by plants inoculated with Om19 was greater than the uninoculated controls. qRT-PCR analysis of five genes related to N uptake and metabolism (two nitrate transporters, an ammonium transporter, glutamine synthetase, and glutamate synthase) showed that these genes were highly upregulated with twofold to ninefold greater expression in plants inoculated with Om19 compared to uninoculated plants. In the third experiment, Om19 was inoculated into the peat-based substrate for growing Formosa azalea (Rhododendron indica ‘Formosa’). ‘Formosa’ azalea plants grown in the inoculated substrate had larger canopies and root systems compared to uninoculated plants. Our results show that Om19 could be an important microbial tool for improving production of Rhododendron plants.

  17. A New Oidiodendron maius Strain Isolated from Rhododendron fortunei and its Effects on Nitrogen Uptake and Plant Growth

    PubMed Central

    Wei, Xiangying; Chen, Jianjun; Zhang, Chunying; Pan, Dongming

    2016-01-01

    A new mycorrhizal fungal strain was isolated from hair roots of Rhododendron fortunei Lindl. grown in Huading Forest Park, Zhejiang Province, China. Morphological characterization and internal transcribed spacer rDNA analysis suggested that it belongs to Oidiodendron maius Barron, and we designated it as strain Om19. Methods for culturing Om19 were established, and the ability of Om19 to form mycorrhizae on R. fortunei was evaluated in a peat-based substrate. Microscopic observations showed hyaline hyphae on the surface of hair roots and crowded hyphal complexes (hyphal coils) inside root cortical cells of R. fortunei after inoculation, indicating that the roots were well colonized by Om19. In a second experiment, fresh and dry weight of R. fortunei 2 months after Om19 inoculation were greater than uninoculated plants, and the total nitrogen absorbed by plants inoculated with Om19 was greater than the uninoculated controls. qRT-PCR analysis of five genes related to N uptake and metabolism (two nitrate transporters, an ammonium transporter, glutamine synthetase, and glutamate synthase) showed that these genes were highly upregulated with twofold to ninefold greater expression in plants inoculated with Om19 compared to uninoculated plants. In the third experiment, Om19 was inoculated into the peat-based substrate for growing Formosa azalea (Rhododendron indica ‘Formosa’). ‘Formosa’ azalea plants grown in the inoculated substrate had larger canopies and root systems compared to uninoculated plants. Our results show that Om19 could be an important microbial tool for improving production of Rhododendron plants. PMID:27602030

  18. A New Oidiodendron maius Strain Isolated from Rhododendron fortunei and its Effects on Nitrogen Uptake and Plant Growth.

    PubMed

    Wei, Xiangying; Chen, Jianjun; Zhang, Chunying; Pan, Dongming

    2016-01-01

    A new mycorrhizal fungal strain was isolated from hair roots of Rhododendron fortunei Lindl. grown in Huading Forest Park, Zhejiang Province, China. Morphological characterization and internal transcribed spacer rDNA analysis suggested that it belongs to Oidiodendron maius Barron, and we designated it as strain Om19. Methods for culturing Om19 were established, and the ability of Om19 to form mycorrhizae on R. fortunei was evaluated in a peat-based substrate. Microscopic observations showed hyaline hyphae on the surface of hair roots and crowded hyphal complexes (hyphal coils) inside root cortical cells of R. fortunei after inoculation, indicating that the roots were well colonized by Om19. In a second experiment, fresh and dry weight of R. fortunei 2 months after Om19 inoculation were greater than uninoculated plants, and the total nitrogen absorbed by plants inoculated with Om19 was greater than the uninoculated controls. qRT-PCR analysis of five genes related to N uptake and metabolism (two nitrate transporters, an ammonium transporter, glutamine synthetase, and glutamate synthase) showed that these genes were highly upregulated with twofold to ninefold greater expression in plants inoculated with Om19 compared to uninoculated plants. In the third experiment, Om19 was inoculated into the peat-based substrate for growing Formosa azalea (Rhododendron indica 'Formosa'). 'Formosa' azalea plants grown in the inoculated substrate had larger canopies and root systems compared to uninoculated plants. Our results show that Om19 could be an important microbial tool for improving production of Rhododendron plants. PMID:27602030

  19. Plant uptake and the leaching of metals during the hot EDDS-enhanced phytoextraction process.

    PubMed

    Luo, Chun-Ling; Shen, Zhen-Guo; Li, Xiang-Dong

    2007-01-01

    Using pot experiments, the effect of the application of the biodegradable chelating agent S,S-ethylenediaminedisuccinic acid (EDDS) in hot solutions at 90 degrees C on the uptake of Cu, Pb, Zn, and Cd by corn (Zea mays L. cv. Nongda No. 108) and beans (P vulgaris L. white bean), and the potential leaching of metals from soil, were studied. When EDDS was applied as a hot solution at the rate of 1 mmol kg(-1), the concentrations and total phytoextraction of metals in plant shoots exceeded or approximated those in the shoots of plants treated with normal EDDS at the rate of 5 mmol kg(-1). On the other hand, the leaching of Cu, Pb, Zn, and Cd after the application of the hot EDDS solution at the rate of 1 mmol kg(-1) was reduced by 46%, 21%, 57%, and 35% in comparison with that from the application of normal EDDS at 5 mmol kg(-1), respectively. For treatment with 1 mmol kg(-1) of EDDS, the leached metals decreased to the levels of the control group (that without EDDS amendment) 14 d after the application of EDDS. The soil amendment with biodegradable EDDS in hot solutions may provide a good alternative to chelate-enhanced phytoextraction in enhancing metal uptake by plants and limiting metals from leaching out of the soil.

  20. Magnetite nanoparticle (NP) uptake by wheat plants and its effect on cadmium and chromium toxicological behavior.

    PubMed

    López-Luna, J; Silva-Silva, M J; Martinez-Vargas, S; Mijangos-Ricardez, O F; González-Chávez, M C; Solís-Domínguez, F A; Cuevas-Díaz, M C

    2016-09-15

    The aim of this work was to assess the uptake of citrate-coated magnetite nanoparticles (NPs) by wheat plants and its effect on the bioaccumulation and toxicity of individual and joint Cd(2+) and Cr(6+) levels. Seven-day assays were conducted using quartz sand as the plant growth substrate. The endpoints measured were seed germination, root and shoot lengths, and heavy metal accumulation. Magnetite exhibited very low toxicity, regardless of the wheat seedling NP uptake and distribution into roots and shoots. The seed germination and shoot length were not sensitive enough, while the root length was a more sensitive toxicity endpoint. The root length of wheat seedlings exposed to individual metals decreased by 50% at 2.67mgCd(2)(+)kg(-1) and 5.53mgCr(6+)kg(-1). However, when magnetite NPs (1000mgkg(-1)) were added, the root length of the plants increased by 25 and 50%. Cd(2+) and Cr(6+) showed similar and noninteractive joint action, but strongly impaired the wheat seedlings. In contrast, an interactive infra-additive or antagonistic effect was observed upon adding magnetite NPs. Thus, cadmium and chromium accumulation in vegetable tissues was considerately diminished and the toxicity alleviated. PMID:26806072

  1. Magnetite nanoparticle (NP) uptake by wheat plants and its effect on cadmium and chromium toxicological behavior.

    PubMed

    López-Luna, J; Silva-Silva, M J; Martinez-Vargas, S; Mijangos-Ricardez, O F; González-Chávez, M C; Solís-Domínguez, F A; Cuevas-Díaz, M C

    2016-09-15

    The aim of this work was to assess the uptake of citrate-coated magnetite nanoparticles (NPs) by wheat plants and its effect on the bioaccumulation and toxicity of individual and joint Cd(2+) and Cr(6+) levels. Seven-day assays were conducted using quartz sand as the plant growth substrate. The endpoints measured were seed germination, root and shoot lengths, and heavy metal accumulation. Magnetite exhibited very low toxicity, regardless of the wheat seedling NP uptake and distribution into roots and shoots. The seed germination and shoot length were not sensitive enough, while the root length was a more sensitive toxicity endpoint. The root length of wheat seedlings exposed to individual metals decreased by 50% at 2.67mgCd(2)(+)kg(-1) and 5.53mgCr(6+)kg(-1). However, when magnetite NPs (1000mgkg(-1)) were added, the root length of the plants increased by 25 and 50%. Cd(2+) and Cr(6+) showed similar and noninteractive joint action, but strongly impaired the wheat seedlings. In contrast, an interactive infra-additive or antagonistic effect was observed upon adding magnetite NPs. Thus, cadmium and chromium accumulation in vegetable tissues was considerately diminished and the toxicity alleviated.

  2. Uptake by roots and translocation to shoots of polychlorinated dibenzo-p-dioxins and dibenzofurans in typical crop plants.

    PubMed

    Zhang, Haijun; Chen, Jiping; Ni, Yuwen; Zhang, Qing; Zhao, Liang

    2009-08-01

    Root uptake and subsequent translocation of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) in 12 agricultural crops were comparatively investigated. All crop plants were exposed hydroponically to a mixture of three kinds of dioxin congeners over 4d. The root concentration factor (RCF) of dioxin showed a logarithmic correlation with extractable lipid content in plant root. On the assumption that the dioxin escaping via gas phase from nutrient solution in the closed container can evenly diffuse in the air and equally absorb onto the shoot tissues of the dioxin-exposed plant and their nearby blank control plant, the amount of translocated dioxin was estimated by subtracting dioxin content in the shoot tissues of the blank control plant from that of the dioxin-exposed plant, and then the transpiration stream concentration factor (TSCF) of dioxin was calculated. The TSCF values of PCDD/Fs largely varied according to the plant species, and the TSCF values of 2,4,8-TrCDF were a little higher than those for 1,3,6,8-TeCDD expect for zucchini. For 1,3,6,8-TeCDD, zucchini had the highest TSCF value of 0.0089, followed by pumpkin (0.0064) towel gourd (0.0027), and cucumber (0.0010), verifying plants of the genus Cucurbita have the higher abilities of dioxin translocation. The TSCF values of 1,3,6,8-TeCDD for wheat and sorghum were 0.0013 and 0.0012, respectively. For maize, soybean, rice, Chinese cabbage, tomato and garland chrysanthemum, translocation was an insignificant mechanism of dioxin contamination in shoot tissues. PMID:19541345

  3. Uptake of munitions materiels (TNT, RDX) by crop plants and potential interactions of nitrogen nutrition

    SciTech Connect

    Fellows, R.J.; Harvey, S.D.; Cataldo, D.A.; Mitchell, W.

    1995-12-31

    Munitions materiel such as trinitrotoluene (TNT) and hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) and their combustion/decomposition products can accumulate/cycle in terrestrial environs. High soil organic matter and fertility have been previously shown to negatively correlate with both TNT or RDX uptake in plants such as grass, wheat, and bean. The present study was therefore conducted using low fertility soil to assess uptake and distribution patterns of C-radiolabelled TNT and RDX (15 and 30 {micro}g/g) within corn (Zea mays), spinach (Spinacea oleraceae), carrot (Daucus carota), and alfalfa (Medicago sativa) grown to maturity in growth chambers. Uptake by the plants at maturity (90- to 120-days) ranged from 1.8 to 2.7% of total amended {sup 14}C-TNT for carrots and corn respectively and 17 to 33% of total amended {sup 14}C-RDX for corn and carrots respectively. Distribution patterns of total radiolabel indicate that the TNT-derived label was primarily retained within the roots (60 to 85%) while the RDX-derived label was distributed to the shoots (85 to 97%). Less than 0.01 {micro}g/g dry wt. TNT was found in all analyzed shoot tissues with > 90% of the TNT-derived radiolabel in the form of polar metabolites. Concentrations of RDX in shoot tissues of corn exceeded 180 {micro}g/g dry wt. Alfalfa grown in unfertilized, fertilized (NO{sub 3}), or unfertilized-inoculated (Rhizobia) soil exhibited a 70 to 100% increase in dry wt. after 45 days in the TNT-amended (15 {micro}g/g) fertilized and unfertilized-inoculated plants versus the controls. A potential TNT/nitrogen interaction will be discussed.

  4. Comparative evaluation of actinide ion uptake by polymer inclusion membranes containing TODGA as the carrier extractant.

    PubMed

    Mahanty, B N; Raut, D R; Mohapatra, P K; Das, D K; Behere, P G; Afzal, Md

    2014-06-30

    Polymer inclusion membranes (PIM) containing TODGA (N,N,N',N'-tetra-n-octyl diglycolamide) were evaluated for the separation of actinide ions such as Am(3+), Pu(4+), UO2(2+) and Th(4+) from acidic feeds. The PIMs were prepared using cellulose triacetate (CTA) as the polymer matrix and 2-nitrophenyloctyl ether (NPOE) as the plasticizer along with the diglycolamide carrier extractants and were characterized by conventional techniques such as XRD, thermal analysis and AFM. The PIM composition was optimized by a series of studies which involved variation in the CTA, NPOE and carrier concentration which suggested 58% TODGA, 30% NPOE and 12% CTA to be optimum. The uptake studies were carried out using feed solutions containing varying concentrations of nitric acid and showed the trend: Am(3+)>Pu(4+)>Th(4+)>UO2(2+). Transport studies were carried out in a two-compartment cell where nitric acid concentration the feed was varied (1-3M) while the receiver compartment contained alpha-hydroxy-iso-butyric acid (AHIBA). The actinide ion transport efficiencies with TODGA containing PIMs followed the same trend as seen in the uptake studies. The AFM patterns of the PIMs changed when loaded with Eu(3+) carrier (used as a surrogate for Am(3+)) while the regenerated membranes have displayed comparable morphologies. Diffusion coefficient values were experimentally obtained from the transport studies and were found to be 8.89×10(-8) cm(2)/s for Am(3+) transport.

  5. A portion of plant airborne communication is endorsed by uptake and metabolism of volatile organic compounds.

    PubMed

    Matsui, Kenji

    2016-08-01

    Plants have the ability to sense volatile organic compounds (VOCs) so as to efficiently adapt to their environment. The mechanisms underlying such plant 'olfactory' systems are largely unknown. Here I would like to propose that the metabolism of VOCs in plant tissues is one of the mechanisms by which plants sense VOCs. During the gas-exchange that is essential for photosynthesis, VOCs in the atmosphere are taken into the intercellular spaces of leaves. Each VOC is partitioned between the gas phase (intercellular space) and liquid phase (cell wall) at a certain ratio determined by Henry's law. The VOCs in the cell wall diffuse through the plasma membrane to the cytosol depending on their oil/water partition coefficients. Plants detoxify some VOCs, especially those that are oxidized, through glycosylation, glutathionylation, and reduction. These metabolic processes lower the concentration of VOCs in the cytosol, which facilitates further cytosolic uptake. As a result, vigorous metabolism of VOCs in the cytosol can lead to a substantial accumulation of VOC metabolites and the depletion of glutathione or NADPH. One such metabolite (a VOC glycoside) is known to mount a direct defense against herbivores, whilst deprivation of glutathione and NADPH can fortify plants with responses similar to the oxidative stress response. PMID:27281633

  6. A portion of plant airborne communication is endorsed by uptake and metabolism of volatile organic compounds.

    PubMed

    Matsui, Kenji

    2016-08-01

    Plants have the ability to sense volatile organic compounds (VOCs) so as to efficiently adapt to their environment. The mechanisms underlying such plant 'olfactory' systems are largely unknown. Here I would like to propose that the metabolism of VOCs in plant tissues is one of the mechanisms by which plants sense VOCs. During the gas-exchange that is essential for photosynthesis, VOCs in the atmosphere are taken into the intercellular spaces of leaves. Each VOC is partitioned between the gas phase (intercellular space) and liquid phase (cell wall) at a certain ratio determined by Henry's law. The VOCs in the cell wall diffuse through the plasma membrane to the cytosol depending on their oil/water partition coefficients. Plants detoxify some VOCs, especially those that are oxidized, through glycosylation, glutathionylation, and reduction. These metabolic processes lower the concentration of VOCs in the cytosol, which facilitates further cytosolic uptake. As a result, vigorous metabolism of VOCs in the cytosol can lead to a substantial accumulation of VOC metabolites and the depletion of glutathione or NADPH. One such metabolite (a VOC glycoside) is known to mount a direct defense against herbivores, whilst deprivation of glutathione and NADPH can fortify plants with responses similar to the oxidative stress response.

  7. Analysing global ecosystem CO2 uptake capacity with plant trait data

    NASA Astrophysics Data System (ADS)

    van de Weg, Martine; Sadat Musavi, Talie; van Bodegom, Peter; Kattge, Jens; Mahecha, Miguel; Reichstein, Markus; Bahn, Michael

    2014-05-01

    Given the modulating role of vegetation in the global carbon cycle, there is a demand for simple and general scaling relationships of vegetation characteristics and ecosystem CO2-uptake and emissions. On a leaf level, is it well established that plant trait foliar nitrogen (N) relates strongly with leaf level CO2. Furthermore, ecosystem productivity or CO2 uptake capacity have been related directly with whole-canopy N concentrations for a variety of ecosystems such as grasslands, and boreal, temporal and tropical forests. However, studies on the global validity of these leaf and ecosystem level relationships have been lacking up to date. The arrival of the large plant trait database TRY database offers the opportunity to link plant trait and ecosystem functioning on a global scale. In this study, we used CO2 flux data from the FLUXNET database, with plant trait (Narea) data from TRY and Narea measurements from a selection of FLUXNET sites as well. For 83 global FLUXNET sites, which had information available on species composition, we derived the light saturated gross primary productivity (GPP1000). We used MODIS LAI and fPAR, together with the species' relative height and abundance data, to up-scale the TRY derived Narea values to a canopy value per site (Ncanopy). For this calculation we assumed that top canopy leaves contribute more to CO2 uptake, and used a Lambert-Beer canopy light extinction principle to weigh the relative contribution per species to the final Ncanopy value. For our analyses, we divided the sites in five different vegetation classes: broad leaved forests, needle leaved forests, grasslands, crops and (sub)arctic non-forest vegetation. Site-measured Nareadata corroborated well with TRY derived Narea data, giving confidence in using a database such as TRY for global analyses like ours. Ncanopy alone explained 18 % of the observed variation in maximum (90th percentile) GPP1000 with a linear model. When adding the different vegetation types as a

  8. Comparative Metabolism of Carbon Tetrachloride in Rats, Mice and Hamsters Using Gas Uptake and PBPK Modeling

    SciTech Connect

    Thrall, Karla D. ); Vucelick, Mark E.; Gies, Richard A. ); Zangar, Richard C. ); Weitz, Karl K. ); Poet, Torka S. ); Springer, David L. ); Grant, Donna M. ); Benson, Janet M.

    2000-08-25

    No study has comprehensively compared the rate of metabolism of carbon tetrachloride (CCl4) across species. Therefore, the in vivo metabolism of CCl4 was evaluated using groups of male animals (F344 rats, B6C3F1 mice, and Syrian hamsters) exposed to 40-1800 ppm CCl4 in a closed, recirculating gas-uptake system. For each species, an optimal fit of the family of uptake curves was obtained by adjusting Michaelis-Menten metabolic constants Km (affinity) and Vmax (capacity) using a physiologically based pharmacokinetic (PBPK) model. The results show that the mouse has a slightly higher capacity and lower affinity for metabolizing CCl4 compared to the rat, while the hamster has a higher capacity and lower affinity than either rat or mouse. A comparison of the Vmax to Km ratio, normalized for mg of liver protein (L/hr/mg) across species indicates that hamsters metabolize more CCl4 than either rats or mice, and should be more susceptible to CCl4-induced hepatotoxicity. These species comparisons were evaluated against toxicokinetic studies conducted in animals exposed by nose-only inhalation to 20 ppm 14C-labeled CCl4 for 4 hours. The toxicokinetic study results are consistent with the in vivo rates of metabolism, with rats eliminating less radioactivity associated with metabolism (14CO2 and urine/feces) and more radioactivity associated with the parent compound (radioactivity trapped on charcoal) compared to either hamsters or mice. The in vivo metabolic constants determined here, together with in vitro constants determined using rat, mouse, hamster and human liver microsomes, were used to estimate human in vivo metabolic rates of 1.49 mg/hr/kg body weight and 0.25 mg/L for Vmax and Km, respectively. Normalizing the rate of metabolism (Vmax/Km) by mg liver protein, the rate of metabolism of CCl4 differs across species, with hamster > mouse& > rat > human.

  9. PlantGDB: a resource for comparative plant genomics

    PubMed Central

    Duvick, Jon; Fu, Ann; Muppirala, Usha; Sabharwal, Mukul; Wilkerson, Matthew D.; Lawrence, Carolyn J.; Lushbough, Carol; Brendel, Volker

    2008-01-01

    PlantGDB (http://www.plantgdb.org/) is a genomics database encompassing sequence data for green plants (Viridiplantae). PlantGDB provides annotated transcript assemblies for >100 plant species, with transcripts mapped to their cognate genomic context where available, integrated with a variety of sequence analysis tools and web services. For 14 plant species with emerging or complete genome sequence, PlantGDB's genome browsers (xGDB) serve as a graphical interface for viewing, evaluating and annotating transcript and protein alignments to chromosome or bacterial artificial chromosome (BAC)-based genome assemblies. Annotation is facilitated by the integrated yrGATE module for community curation of gene models. Novel web services at PlantGDB include Tracembler, an iterative alignment tool that generates contigs from GenBank trace file data and BioExtract Server, a web-based server for executing custom sequence analysis workflows. PlantGDB also hosts a plant genomics research outreach portal (PGROP) that facilitates access to a large number of resources for research and training. PMID:18063570

  10. Involvement of Na+ in Active Uptake of Pyruvate in Mesophyll Chloroplasts of Some C4 Plants 1

    PubMed Central

    Ohnishi, Jun-ichi; Flügge, Ulf-Ingo; Heldt, Hans W.; Kanai, Ryuzi

    1990-01-01

    An artificial Na+ gradient across the envelope (Na+ jump) enhanced pyruvate uptake in the dark into mesophyll chloroplasts of a C4 plant, Panicum miliaceum (NAD-malic enzyme type) (J Ohnishi, R Kanai [1987] FEBS Lett 219:347). In the present study, 22Na+ and pyruvate uptake were examined in mesophyll chloroplasts of several species of C4 plants. Enhancement of pyruvate uptake by a Na+ jump in the dark was also seen in mesophyll chloroplasts of Urochloa panicoides and Panicum maximum (phosphoenolpyruvate carboxykinase types) but not in Zea mays or Sorghum bicolor (NADP-malic enzyme types). In mesophyll chloroplasts of P. miliaceum and P. maximum, pyruvate in turn enhanced Na+ uptake in the dark when added together with Na+. When flux of endogenous Na+ was measured in these mesophyll chloroplasts preincubated with 22Na+, pyruvate addition induced Na+ influx, and the extent of the pyruvate-induced Na+ influx positively correlated with that of pyruvate uptake. A Na+/H+ exchange ionophore, monensin, nullified all the above mutual effects of Na+ and pyruvate in mesophyll chloroplasts of P. miliaceum, while it accelerated Na+ uptake and increased equilibrium level of chloroplast 22Na+. Measurements of initial uptake rates of pyruvate and Na+ gave a stoichiometry close to 1:1. These results point to Na+/pyruvate cotransport into mesophyll chloroplasts of some C4 plants. PMID:16667876

  11. Effects of a phospholipase A/sub 2/ inhibitor on uptake and toxicity of liposomes containing plant phosphatidylinositol

    SciTech Connect

    Jett, M.; Alving, C.R.

    1986-05-01

    Plant phosphatidylinositol (PI) has been shown by us to have a direct cytotoxic effect on cultured tumor cells but not on normal cells. Synthetic PI containing /sup 14/C-linoleic acid in the sn-2 position, also showed the same pattern of selective cytotoxicity. When the metabolic fate of synthetic PI was examined with tumor cells, the radioactivity which no longer occurred as PI, was found as either products of phospholipase A/sub 2/ (93%, free fatty acids and phosphatidylcholine) or phospholipase C (7%, diglycerides). Uptake of liposomal PI was directly correlated with cytotoxicity. They tested a variety of inhibitors to see the effect on uptake and/or cytotoxicity of plant PI. General metabolic inhibitors such as metrizamide or sodium azide did not alter cellular uptake of the plant PI liposomes. Inhibitors of lipoxygenase formation, such as indomethacin, also did not alter the uptake or cytotoxicity induced by plant PI. Quinacrine, an inhibitor of phospholipase A/sub 2/, decreased the uptake of the PI containing liposomes to 50% of that seen in the presence or absence of any other inhibitor. Although quinacrine is itself toxic to cells, at low concentrations of quinacrine, plant PI did not show the same degree of cytotoxicity as in the absence of quinacrine. These data are compatible with the hypothesis that plant PI exerts cytotoxicity by serving as a substrate for phospholipase A/sub 2/.

  12. Effects of Posidonia oceanica beach-cast on germination, growth and nutrient uptake of coastal dune plants.

    PubMed

    Del Vecchio, Silvia; Marbà, Núria; Acosta, Alicia; Vignolo, Clara; Traveset, Anna

    2013-01-01

    Seagrass meadows play an important role in marine ecosystems. A part of seagrass production is also exported to adjacent coastal terrestrial systems, possibly influencing their functioning. In this work we experimentally analyzed the effect of Posidonia oceanica beach-cast on plant germination, growth, and nutrient uptake of two plant species (Cakile maritima and Elymus farctus) that grow on upper beaches and fore dunes along the Mediterranean coasts. We compared plants growing in simple sand (control) with those growing in a substrate enriched with P. oceanica wrack (treatment) in laboratory. P. oceanica wrack doubled the N substrate pool and kept the substrate humid. Plants growing in the treated substrate grew faster, were twice as large as those growing in the control substrate, while tissues were enriched in N and P (Cakile by the 1.3 fold in N and 2.5 fold in P; Elymus by 1.5 fold in N and 2 fold in P). Our results suggest a positive effect of seagrass litter for the enhancing of dune species, highlighting its role for the conservation of coastal dune ecosystems.

  13. Use of Gold Nanoparticles to Detect Water Uptake in Vascular Plants

    PubMed Central

    Hwang, Bae Geun; Ahn, Sungsook; Lee, Sang Joon

    2014-01-01

    Direct visualization of water-conducting pathways and sap flows in xylem vessels is important for understanding the physiology of vascular plants and their sap ascent. Gold nanoparticles (AuNPs) combined with synchrotron X-ray imaging technique is a new promising tool for investigating plant hydraulics in opaque xylem vessels of vascular plants. However, in practical applications of AuNPs for real-time quantitative visualization of sap flows, their interaction with a vascular network needs to be verified in advance. In this study, the effect of AuNPs on the water-refilling function of xylem vessels is experimentally investigated with three monocot species. Discrepancy in the water uptakes starts to appear at about 20 min to 40 min after the supply of AuNP solution to the test plant by the possible gradual accumulation of AuNPs on the internal structures of vasculature. However conclusively, it is observed that the water-refilling speeds in individual xylem vessels are virtually unaffected by hydrophilically surface-modified AuNPs (diameter ∼20 nm). Therefore, the AuNPs can be effectively used as flow tracers in the xylem vessels in the first 20∼30 min without any physiological barrier. As a result, AuNPs are found to be useful for visualizing various fluid dynamic phenomena occurring in vascular plants. PMID:25502567

  14. Use of gold nanoparticles to detect water uptake in vascular plants.

    PubMed

    Hwang, Bae Geun; Ahn, Sungsook; Lee, Sang Joon

    2014-01-01

    Direct visualization of water-conducting pathways and sap flows in xylem vessels is important for understanding the physiology of vascular plants and their sap ascent. Gold nanoparticles (AuNPs) combined with synchrotron X-ray imaging technique is a new promising tool for investigating plant hydraulics in opaque xylem vessels of vascular plants. However, in practical applications of AuNPs for real-time quantitative visualization of sap flows, their interaction with a vascular network needs to be verified in advance. In this study, the effect of AuNPs on the water-refilling function of xylem vessels is experimentally investigated with three monocot species. Discrepancy in the water uptakes starts to appear at about 20 min to 40 min after the supply of AuNP solution to the test plant by the possible gradual accumulation of AuNPs on the internal structures of vasculature. However conclusively, it is observed that the water-refilling speeds in individual xylem vessels are virtually unaffected by hydrophilically surface-modified AuNPs (diameter ∼20 nm). Therefore, the AuNPs can be effectively used as flow tracers in the xylem vessels in the first 20∼30 min without any physiological barrier. As a result, AuNPs are found to be useful for visualizing various fluid dynamic phenomena occurring in vascular plants.

  15. Precipitation thresholds for CO2 uptake in grass and shrub plant communities on Walnut Gulch Experimental Watershed 1849

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In semiarid ecosystems, precipitation is the major driving force for carbon uptake and subsequent plant growth. The hypothesis for this study was that the timing, frequency, and precipitation amount would produce different carbon dioxide and moisture fluxes for grass and shrub plant communities. E...

  16. Phytotoxicity, uptake and metabolism of 1,4-dichlorobenzene by plant cells

    SciTech Connect

    Wang, M.J. |; Bokern, M.; Boehme, C.; Harms, H.; Jones, K.C.

    1996-07-01

    Phytotoxicity, uptake, and metabolism of 1,4-dichlorobenzene (1,4-DCB) by carrot (Daucus carota L.), soybean (Glycine max. L.), tomato (Lycopersicon esculentum Mill.), and red goosefoot (Chenopodiun rubrum L.) cell suspension cultures were studied. Sealed glass systems were utilized for the investigation because 1,4-DCB is volatile. The sealed systems affect the growth of plant cells, but do not provide different results when testing xenobiotic uptake and metabolism. 1,4-Dichlorobenzene (40 {micro}g in 40 ml medium) was taken up by carrot (49%), soybean (50%), and red goosefoot (62%) cells. Only the soybean cell cultures provided evidence of the existence of metabolites of this compound, probably conjugates of chlorophenols. Conditions for phytotoxicity tests were modified because the growth of cell cultures was affected when sealed for longer than 2 d. 1,4-Dichlorobenzene is toxic to cell cultures of the three tested plant species (tomato, soybean, and carrot). Concentrations of 0.5 mM caused 50% growth inhibition in carrot and soybean cultures. The tomato cultures were more sensitive, with 0.05 mM causing 50% growth inhibition.

  17. Can citrate efflux from roots improve phosphorus uptake by plants? Testing the hypothesis with near-isogenic lines of wheat.

    PubMed

    Ryan, Peter R; James, Richard A; Weligama, Chandrakumara; Delhaize, Emmanuel; Rattey, Allan; Lewis, David C; Bovill, William D; McDonald, Glenn; Rathjen, Tina M; Wang, Enli; Fettell, Neil A; Richardson, Alan E

    2014-07-01

    Phosphorus (P) deficiency in some plant species triggers the release of organic anions such as citrate and malate from roots. These anions are widely suggested to enhance the availability of phosphate for plant uptake by mobilizing sparingly-soluble forms in the soil. Carazinho is an old wheat (Triticum aestivum) cultivar from Brazil, which secretes citrate constitutively from its root apices, and here we show that it also produces relatively more biomass on soils with low P availability than two recent Australian cultivars that lack citrate efflux. To test whether citrate efflux explains this phenotype, we generated two sets of near-isogenic lines that differ in citrate efflux and compared their biomass production in different soil types and with different P treatments in glasshouse experiments and field trials. Citrate efflux improved relative biomass production in two of six glasshouse trials but only at the lowest P treatments where growth was most severely limited by P availability. Furthermore, citrate efflux provided no consistent advantage for biomass production or yield in multiple field trials. Theoretical modeling indicates that the effectiveness of citrate efflux in mobilizing soil P is greater as the volume of soil into which it diffuses increases. As efflux from these wheat plants is restricted to the root apices, the potential for citrate to mobilize sufficient P to increase shoot biomass may be limited. We conclude that Carazinho has other attributes that contribute to its comparatively good performance in low-P soils.

  18. Mercury emission and plant uptake of trace elements during early stage of soil amendment using flue gas desulfurization materials.

    PubMed

    Cheng, Chin-Min; Chang, Yung-Nan; Sistani, Karamat R; Wang, Yen-Wen; Lu, Wen-Chieh; Lin, Chia-Wei; Dong, Jing-Hong; Hu, Chih-Chung; Pan, Wei-Ping

    2012-02-01

    A pilot-scale field study was carried out to investigate the distribution of Hg and other selected elements (i.e., As, B, and Se), i.e., emission to ambient air, uptake by surface vegetation, and/or rainfall infiltration, after flue gas desulfurization (FGD) material is applied to soil. Three FGD materials collected from two power plants were used. Our results show Hg released into the air and uptake in grass from all FGD material-treated soils were all higher (P < 0.1) than the amounts observed from untreated soil. Hg in the soil amended with the FGD material collected from a natural oxidation wet scrubber (i.e., SNO) was more readily released to air compared to the other two FGD materials collected from the synthetic gypsum dewatering vacuum belt (i.e., AFO-gypsum) and the waste water treatment plant (i.e., AFO-CPS) of a forced oxidation FGD system. No Hg was detected in the leachates collected during the only 3-hour, 1-inch rainfall event that occurred throughout the 4-week testing period. For every kilogram of FGD material applied to soil, AFO-CPS released the highest amount of Hg, B, and Se, followed by SNO, and AFO gypsum. Based on the same energy production rate, the land application of SNO FGD material from Plant S released higher amounts of Hg and B into ambient air and/or grass than the amounts released when AFO-gypsum from Plant A was used. Using FGD material with lower concentration levels of Hg and other elements of concern does not necessary post a lower environmental risk. In addition, this study demonstrates that considering only the amounts of trace elements uptake in surface vegetation may under estimate the overall release of the trace elements from FGD material-amended soils. It also shows, under the same soil amendment conditions, the mobility of trace elements varies when FGD materials produced from different processes are used.

  19. Soil- and plant- water uptake in saline environments and their consequences to plant adaptation in fluctuating climates

    NASA Astrophysics Data System (ADS)

    Volpe, V.; Albertson, J. D.; Katul, G. G.; Marani, M.

    2010-12-01

    Ecological processes determining plant colonization are quite peculiar and competition among different species is governed by a set of unique adaptations to stress conditions caused by drought, hypoxic or hyper-saline conditions. These adaptations and possible positive feedbacks often lead to the formation of patterns of vegetation colonization and spatial heterogeneity (zonation), and play a primary role in the stabilization of sediments. It is these issues that frame the scope of this study. The main objective of this work is to track one of the fundamental pathways between plant adaptation (quantified in terms of physiological and ecological attributes such as leaf area or root density profile) and feedbacks (quantified by plant-mediated alterations to water availability and salinity levels): root water uptake. Because root-water uptake is the main conduit connecting transpiring leaves to reservoirs of soil water, the means by which salinity modifies the processes governing its two end-points and any two-way interactions between them serves as a logical starting point. Salinity effects on leaf transpiration and photosynthesis are first explored via stomatal optimization principles that maximize carbon gain at a given water loss for autonomous leaves. Salinity directly affects leaf physiological attributes such as mesophyll conductance and photosynthetic parameters and hence over-all conductance to transpiration as well as different strategies to cope with the high salinity (e.g. through salt seclusion, compartmentation and osmotic adjustments). A coupled model of subsurface flow based on a modified Richards’ equation that accounts for the effects of increasing salinity, anaerobic conditions, water stress and compensation factors is developed. Plant water uptake is considered as a soil moisture sink term with a potential rate dictated by the carbon demands of the leaves, and an actual rate that accounts for both - hydraulic and salinity limitations. Using this

  20. Comparative analysis of cesium and potassium uptake in onion Allium cepa L.

    NASA Astrophysics Data System (ADS)

    Urban, P. Ł.; Bystrzejewska-Piotrowska, G.

    2003-01-01

    Cesium uptake in onion (from 0.3 mM CsCl solution traced with 137CsCl) has been examined. The highest uptake occurred at pH 4-5 and it decreased with increasing pH. The intensity of Cs translocation depended on acidity of the solution. For acidic solutions, translocation of cesium into bulbs and leaves was greater than in case of alkaline solutions, where most of the cesium remained in the roots. Addition of potassium into the solutions (millimolar K concentrations) inhibits Cs uptake. The potassium pH-influx/efflux characteristic does not coincide with the Cs uptake.

  1. Planting stress in newly planted jack pine and white spruce. 1. Factors influencing water uptake.

    PubMed

    Grossnickle, S C

    1988-03-01

    Bareroot jack pine (Pinus banksiana Lamb.) seedlings (2 + 0) and bareroot white spruce (Picea glauca (Moench) Voss) transplants (1 1/2 + 1 1/2) were taken from cold storage and planted on a clearcut forest site in northeastern Ontario on several dates between May 6 and June 5 during which period soil temperature at 15 cm depth increased from 0 to 18 degrees C. Additional cold-stored trees were transferred to a greenhouse where they were grown in pots for 0, 7 or 28 days and then placed with their roots in aerated water maintained at one of a range of constant temperatures between 0 and 22 degrees C. In both species, daytime xylem pressure potentials (Psi(x)) and needle conductances (g(wv)) decreased with decreasing soil or water temperature. At all root temperatures, g(wv) was lower, and Psi(x) higher, in jack pine than in white spruce. After 28 days in the greenhouse, g(wv) of jack pine seedlings, and Psi(x) of white spruce, was higher than in plants just removed from cold storage. In both species, water-flow resistance through the soil-plant-atmosphere continuum (RSPAC) increased as root temperature decreased. At all root temperatures, RSPAC was higher in plants just removed from cold storage than in plants grown in the greenhouse for 28 days, during which time many new unsuberized roots were formed. At root temperatures above 10 degrees C, RSPAC of both species was higher in trees newly planted in mineral soil than in trees with roots in aerated water; presumably because the roots of planted trees had limited hydraulic contact with the soil. On the day following removal from cold storage, relative plant water flow resistance increased, in both species, more rapidly with declining root temperature than could be accounted for by the change with temperature in the viscosity of water, thus indicating an effect of temperature on root permeability. The same effect was evident in jack pine seedlings, but not white spruce transplants, that had been grown for 28 days in

  2. Planting stress in newly planted jack pine and white spruce. 1. Factors influencing water uptake.

    PubMed

    Grossnickle, S C

    1988-03-01

    Bareroot jack pine (Pinus banksiana Lamb.) seedlings (2 + 0) and bareroot white spruce (Picea glauca (Moench) Voss) transplants (1 1/2 + 1 1/2) were taken from cold storage and planted on a clearcut forest site in northeastern Ontario on several dates between May 6 and June 5 during which period soil temperature at 15 cm depth increased from 0 to 18 degrees C. Additional cold-stored trees were transferred to a greenhouse where they were grown in pots for 0, 7 or 28 days and then placed with their roots in aerated water maintained at one of a range of constant temperatures between 0 and 22 degrees C. In both species, daytime xylem pressure potentials (Psi(x)) and needle conductances (g(wv)) decreased with decreasing soil or water temperature. At all root temperatures, g(wv) was lower, and Psi(x) higher, in jack pine than in white spruce. After 28 days in the greenhouse, g(wv) of jack pine seedlings, and Psi(x) of white spruce, was higher than in plants just removed from cold storage. In both species, water-flow resistance through the soil-plant-atmosphere continuum (RSPAC) increased as root temperature decreased. At all root temperatures, RSPAC was higher in plants just removed from cold storage than in plants grown in the greenhouse for 28 days, during which time many new unsuberized roots were formed. At root temperatures above 10 degrees C, RSPAC of both species was higher in trees newly planted in mineral soil than in trees with roots in aerated water; presumably because the roots of planted trees had limited hydraulic contact with the soil. On the day following removal from cold storage, relative plant water flow resistance increased, in both species, more rapidly with declining root temperature than could be accounted for by the change with temperature in the viscosity of water, thus indicating an effect of temperature on root permeability. The same effect was evident in jack pine seedlings, but not white spruce transplants, that had been grown for 28 days in

  3. Comparative analysis of plant lycopene cyclases.

    PubMed

    Koc, Ibrahim; Filiz, Ertugrul; Tombuloglu, Huseyin

    2015-10-01

    Carotenoids are essential isoprenoid pigments produced by plants, algae, fungi and bacteria. Lycopene cyclase (LYC) commonly cyclize carotenoids, which is an important branching step in the carotenogenesis, at one or both end of the backbone. Plants have two types of LYC (β-LCY and ϵ-LCY). In this study, plant LYCs were analyzed. Based on domain analysis, all LYCs accommodate lycopene cyclase domain (Pf05834). Furthermore, motif analysis indicated that motifs were conserved among the plants. On the basis of phylogenetic analysis, β-LCYs and ϵ-LCYs were classified in β and ϵ groups. Monocot and dicot plants separated from each other in the phylogenetic tree. Subsequently, Oryza sativa Japonica Group and Zea mays of LYCs as monocot plants and Vitis vinifera and Solanum lycopersicum of LYCs as dicot plants were analyzed. According to nucleotide diversity analysis of β-LCY and ϵ-LCY genes, nucleotide diversities were found to be π: 0.30 and π: 0.25, respectively. The result highlighted β-LCY genes showed higher nucleotide diversity than ϵ-LCY genes. LYCs interacting genes and their co-expression partners were also predicted using String server. The obtained data suggested the importance of LYCs in carotenoid metabolism. 3D modeling revealed that depicted structures were similar in O. sativa, Z mays, S. lycopersicum, and V. vinifera β-LCYs and ϵ-LCYs. Likewise, the predicted binding sites were highly similar between O. sativa, Z mays, S. lycopersicum, and V. vinifera LCYs. Most importantly, analysis elucidated the V/IXGXGXXGXXXA motif for both type of LYC (β-LCY and ϵ-LCY). This motif related to Rossmann fold domain and probably provides a flat platform for binding of FAD in O. sativa, Z mays, S. lycopersicum, and V. vinifera β-LCYs and ϵ-LCYs with conserved structure. In addition to lycopene cyclase domain, the V/IXGXGXXGXXXA motif can be used for exploring LYCs proteins and to annotate the function of unknown proteins containing lycopene cyclase

  4. Comparative analysis of plant lycopene cyclases.

    PubMed

    Koc, Ibrahim; Filiz, Ertugrul; Tombuloglu, Huseyin

    2015-10-01

    Carotenoids are essential isoprenoid pigments produced by plants, algae, fungi and bacteria. Lycopene cyclase (LYC) commonly cyclize carotenoids, which is an important branching step in the carotenogenesis, at one or both end of the backbone. Plants have two types of LYC (β-LCY and ϵ-LCY). In this study, plant LYCs were analyzed. Based on domain analysis, all LYCs accommodate lycopene cyclase domain (Pf05834). Furthermore, motif analysis indicated that motifs were conserved among the plants. On the basis of phylogenetic analysis, β-LCYs and ϵ-LCYs were classified in β and ϵ groups. Monocot and dicot plants separated from each other in the phylogenetic tree. Subsequently, Oryza sativa Japonica Group and Zea mays of LYCs as monocot plants and Vitis vinifera and Solanum lycopersicum of LYCs as dicot plants were analyzed. According to nucleotide diversity analysis of β-LCY and ϵ-LCY genes, nucleotide diversities were found to be π: 0.30 and π: 0.25, respectively. The result highlighted β-LCY genes showed higher nucleotide diversity than ϵ-LCY genes. LYCs interacting genes and their co-expression partners were also predicted using String server. The obtained data suggested the importance of LYCs in carotenoid metabolism. 3D modeling revealed that depicted structures were similar in O. sativa, Z mays, S. lycopersicum, and V. vinifera β-LCYs and ϵ-LCYs. Likewise, the predicted binding sites were highly similar between O. sativa, Z mays, S. lycopersicum, and V. vinifera LCYs. Most importantly, analysis elucidated the V/IXGXGXXGXXXA motif for both type of LYC (β-LCY and ϵ-LCY). This motif related to Rossmann fold domain and probably provides a flat platform for binding of FAD in O. sativa, Z mays, S. lycopersicum, and V. vinifera β-LCYs and ϵ-LCYs with conserved structure. In addition to lycopene cyclase domain, the V/IXGXGXXGXXXA motif can be used for exploring LYCs proteins and to annotate the function of unknown proteins containing lycopene cyclase

  5. Land application of domestic effluent onto four soil types: plant uptake and nutrient leaching.

    PubMed

    Barton, L; Schipper, L A; Barkle, G F; McLeod, M; Speir, T W; Taylor, M D; McGill, A C; van Schaik, A P; Fitzgerald, N B; Pandey, S P

    2005-01-01

    Land application has become a widely applied method for treating wastewater. However, it is not always clear which soil-plant systems should be used, or why. The objectives of our study were to determine if four contrasting soils, from which the pasture is regularly cut and removed, varied in their ability to assimilate nutrients from secondary-treated domestic effluent under high hydraulic loadings, in comparison with unirrigated, fertilized pasture. Grassed intact soil cores (500 mm in diameter by 700 mm in depth) were irrigated (50 mm wk(-1)) with secondary-treated domestic effluent for two years. Soils included a well-drained Allophanic Soil (Typic Hapludand), a poorly drained Gley Soil (Typic Endoaquept), a well-drained Pumice Soil formed from rhyolitic tephra (Typic Udivitrand), and a well-drained Recent Soil formed in a sand dune (Typic Udipsamment). Effluent-irrigated soils received between 746 and 815 kg N ha(-1) and 283 and 331 kg P ha(-1) over two years of irrigation, and unirrigated treatments received 200 kg N ha(-1) and 100 kg P ha(-1) of dissolved inorganic fertilizer over the same period. Applying effluent significantly increased plant uptake of N and P from all soil types. For the effluent-irrigated soils plant N uptake ranged from 186 to 437 kg N ha(-1) yr(-1), while plant P uptake ranged from 40 to 88 kg P ha(-1) yr(-1) for the effluent-irrigated soils. Applying effluent significantly increased N leaching losses from Gley and Recent Soils, and after two years ranged from 17 to 184 kg N ha(-1) depending on soil type. Effluent irrigation only increased P leaching from the Gley Soil. All P leaching losses were less than 49 kg P ha(-1) after two years. The N and P leached from effluent treatments were mainly in organic form (69-87% organic N and 35-65% unreactive P). Greater N and P leaching losses from the irrigated Gley Soil were attributed to preferential flow that reduced contact between the effluent and the soil matrix. Increased N leaching from

  6. Plant nitrogen uptake drives rhizosphere bacterial community assembly during plant growth

    Technology Transfer Automated Retrieval System (TEKTRAN)

    When plant species establish in novel environments, they often modify microbial communities and soil properties in ways that enhance their own success. Upon invasion, the C3 annual grass Bromus tectorum appears to support soil microbial communities that have higher soil nitrogen (N) mineralization r...

  7. Electrophysiological approach to determine kinetic parameters of sucrose uptake by single sieve elements or phloem parenchyma cells in intact Vicia faba plants

    PubMed Central

    Hafke, Jens B.; Höll, Sabina-Roxana; Kühn, Christina; van Bel, Aart J. E.

    2013-01-01

    Apart from cut aphid stylets in combination with electrophysiology, no attempts have been made thus far to measure in vivo sucrose-uptake properties of sieve elements. We investigated the kinetics of sucrose uptake by single sieve elements and phloem parenchyma cells in Vicia faba plants. To this end, microelectrodes were inserted into free-lying phloem cells in the main vein of the youngest fully-expanded leaf, half-way along the stem, in the transition zone between the autotrophic and heterotrophic part of the stem, and in the root axis. A top-to-bottom membrane potential gradient of sieve elements was observed along the stem (−130 mV to −110 mV), while the membrane potential of the phloem parenchyma cells was stable (approx. −100 mV). In roots, the membrane potential of sieve elements dropped abruptly to −55 mV. Bathing solutions having various sucrose concentrations were administered and sucrose/H+-induced depolarizations were recorded. Data analysis by non-linear least-square data fittings as well as by linear Eadie–Hofstee (EH) -transformations pointed at biphasic Michaelis–Menten kinetics (2 MM, EH: Km1 1.2–1.8 mM, Km2 6.6–9.0 mM) of sucrose uptake by sieve elements. However, Akaike's Information Criterion (AIC) favored single MM kinetics. Using single MM as the best-fitting model, Km values for sucrose uptake by sieve elements decreased along the plant axis from 1 to 7 mM. For phloem parenchyma cells, higher Km values (EH: Km1 10 mM, Km2 70 mM) as compared to sieve elements were found. In preliminary patch-clamp experiments with sieve-element protoplasts, small sucrose-coupled proton currents (−0.1 to −0.3 pA/pF) were detected in the whole-cell mode. In conclusion (a) Km values for sucrose uptake measured by electrophysiology are similar to those obtained with heterologous systems, (b) electrophysiology provides a useful tool for in situ determination of Km values, (c) As yet, it remains unclear if one or two uptake systems are involved

  8. Cold climate phosphorus uptake by submerged aquatic plants in a sewage treatment free water surface wetland.

    PubMed

    Ulén, Barbro; Tonderski, Karin S

    2005-01-01

    In November 2002, biomass phosphorus (P) of submerged aquatic plants with associated epiphyton was measured using P-32 tracer addition in a treatment wetland receiving tertiary treated municipal sewage. The wetland is situated 120 km west of Stockholm, Sweden receiving tertiary treated municipal sewage. During the experiment, inflow water had a total P concentration of 0.3 and an iron concentration of 0.7 mg 1(-1) with a residence time of 3-3.5 days. Samples of submerged plants mainly slender waterweed (Elodea nuttallii, L.) and sago pondweed (Potamogeton pectinatus, L.) were taken in two shallow areas (0.21 and 0.51 ha respectively) adjacent to the inlet of one of the wetland subbasins. The sampled area represented 27% of the total 2.6 ha area of the basin. The young phytomass contained 0.02 kg P and the older vegetation parts and epiphyton 0.04 kg P. The sampling took place 90-96 hours after exposure of a pulse of P-32 (18 GBq), i.e. when 75% had passed. Total phytomass was low, only 2 g m(-2) as dry weight. The young phytomass close to the site of injection had higher average beta activity in disintegrations per minute and milligram dry weight (140 DPM mg dw(-1)) than the older parts of the submerged plants (70 DPM mg dw(-1)) indicating an active plant uptake in the former. The latter was interpreted as epiphyton uptake, but since the biomass of old shoots was higher than of young, more P-32 was removed by processes associated with epiphyton as was removed by the young phytomass. In two shallow central zones, the former was equal to 0.006 per thousand of exposed radioactivity in water, while 0.003 per thousand was found in the young phytomass in the same zones of the basin. Close to the inlet a fast P assimilation by the plant biomass was demonstrated. The role of submerged aquatic plants in phosphorus turnover in sewage treatment basins under winter conditions is discussed.

  9. Results of a combined model of root system growth and soil water uptake: evaluating the significance of root system architecture to plant water uptake

    NASA Astrophysics Data System (ADS)

    Bouda, M.; Saiers, J. E.

    2012-12-01

    Root system hydraulic architecture is a key determinant of plants' ability to withdraw water from the soil, satisfying transpirational demand. Presently, the representation of this component of the hydrological cycle in large-scale models is generally very simplistic, even though transpiration accounts for much of the terrestrial heat and water surface fluxes, and exercises control over photosynthetic uptake of CO2. In order to address this gap, we have developed a modelling approach that relies on several components. The first is RootGrow, original MATLAB code that simulates the stochastic growth of a root system as a function of an intrinsic set of parameters as well as its environment. We ran RootGrow coupled to the second component, a finite-element 3D simulation of the physics of water transport in the soil and root system using COMSOL, resulting in a combined model of root system development and water uptake. Model results show that root system architecture can affect water uptake by two separate mechanisms: (a) root system geometry determines the distribution of absorbing surface area throughout the soil domain, and (b) root system topology affects the water potential at the absorbing surfaces. In this study we sample the model's parameter space to demonstrate over what ranges of physically meaningful parameters (including hydraulic conductivity of plant tissues, soil type, and soil moisture level) these mechanisms significantly affect root systems' water withdrawal rate. The two mechanisms identified and our quantitative results will form the basis of a third component in this approach: developing simple analytical relationships characterising water uptake as a function of root system architecture that can be used in Ecosystem Demography Model v2.1 (ED2), a large-scale Dynamic Vegetation Model, based on a method of upscaling individual-based models of plant ecology.

  10. Comparative physiology of elemental distributions in plants

    PubMed Central

    Conn, Simon; Gilliham, Matthew

    2010-01-01

    Background Plants contain relatively few cell types, each contributing a specialized role in shaping plant function. With respect to plant nutrition, different cell types accumulate certain elements in varying amounts within their storage vacuole. The role and mechanisms underlying cell-specific distribution of elements in plants is poorly understood. Scope The phenomenon of cell-specific elemental accumulation has been briefly reviewed previously, but recent technological advances with the potential to probe mechanisms underlying elemental compartmentation have warranted an updated evaluation. We have taken this opportunity to catalogue many of the studies, and techniques used for, recording cell-specific compartmentation of particular elements. More importantly, we use three case-study elements (Ca, Cd and Na) to highlight the basis of such phenomena in terms of their physiological implications and underpinning mechanisms; we also link such distributions to the expression of known ion or solute transporters. Conclusions Element accumulation patterns are clearly defined by expression of key ion or solute transporters. Although the location of element accumulation is fairly robust, alterations in expression of certain solute transporters, through genetic modifications or by growth under stress, result in perturbations to these patterns. However, redundancy or induced pleiotropic expression effects may complicate attempts to characterize the pathways that lead to cell-specific elemental distribution. Accumulation of one element often has consequences on the accumulation of others, which seems to be driven largely to maintain vacuolar and cytoplasmic osmolarity and charge balance, and also serves as a detoxification mechanism. Altered cell-specific transcriptomics can be shown, in part, to explain some of this compensation. PMID:20410048

  11. A comparison of the soil migration and plant uptake of radioactive chlorine and iodine from contaminated groundwater.

    PubMed

    Ashworth, D J; Shaw, G

    2006-01-01

    A 6-month soil column experiment was conducted to compare the upward migration and plant uptake of radiochlorine and radioiodine from shallow, near-surface contaminated water tables. Both fixed and fluctuating water tables were studied. After 6 months, (36)Cl activity concentrations were relatively uniform throughout the soil profile apart from an accumulation at the soil surface, which was especially marked under a fluctuating water table scenario. In contrast, (125)I (a surrogate for (129)I) tended to accumulate at the boundary between the anoxic conditions at the base of the column and the oxic conditions above, due to its redox-dependent sorption behaviour. The uptake of (36)Cl by perennial ryegrass was much greater than that of (125)I due to its greater migration into the rooting zone and its ready availability in soil solution. In the context of radioactive waste disposal, where these radionuclides may potentially be released into groundwater, (36)Cl would be expected to present a greater potential for contamination of the biosphere than (129)I.

  12. Limited uptake, translocation and enhanced metabolic degradation contribute to glyphosate tolerance in Mucuna pruriens var. utilis plants.

    PubMed

    Rojano-Delgado, Antonia María; Cruz-Hipolito, Hugo; De Prado, Rafael; Luque de Castro, María Dolores; Franco, Antonio Rodríguez

    2012-01-01

    Velvet bean (Mucuna pruriens, Fabaceae) plants exhibits an innate, very high resistance (i.e., tolerance) to glyphosate similar to that of plants which have acquired resistance to this herbicide as a trait. We analyzed the uptake of [(14)C]-glyphosate by leaves and its translocation to meristematic tissues, and used scanning electron micrographs to further analyze the cuticle and 3D capillary electrophoresis to investigate a putative metabolism capable of degrading the herbicide. Velvet bean exhibited limited uptake of glyphosate and impaired translocation of the compound to meristematic tissues. Also, for the first time in a higher plant, two concurrent pathways capable of degrading glyphosate to AMPA, Pi, glyoxylate, sarcosine and formaldehyde as end products were identified. Based on the results, the innate tolerance of velvet bean to glyphosate is possibly a result of the combined action of the previous three traits, namely: limited uptake, impaired translocation and enhanced degradation. PMID:22015254

  13. Uptake of pharmaceutical and personal care products by soybean plants from soils applied with biosolids and irrigated with contaminated water.

    PubMed

    Wu, Chenxi; Spongberg, Alison L; Witter, Jason D; Fang, Min; Czajkowski, Kevin P

    2010-08-15

    Many pharmaceuticals and personal care products (PPCPs) are commonly found in biosolids and effluents from wastewater treatment plants. Land application of these biosolids and the reclamation of treated wastewater can transfer those PPCPs into the terrestrial and aquatic environments, giving rise to potential accumulation in plants. In this work, a greenhouse experiment was used to study the uptake of three pharmaceuticals (carbamazepine, diphenhydramine, and fluoxetine) and two personal care products (triclosan and triclocarban) by an agriculturally important species, soybean (Glycine max (L.) Merr.). Two treatments simulating biosolids application and wastewater irrigation were investigated. After growing for 60 and 110 days, plant tissues and soils were analyzed for target compounds. Carbamazepine, triclosan, and triclocarban were found to be concentrated in root tissues and translocated into above ground parts including beans, whereas accumulation and translocation for diphenhydramine and fluoxetine was limited. The uptake of selected compounds differed by treatment, with biosolids application resulting in higher plant concentrations, likely due to higher loading. However, compounds introduced by irrigation appeared to be more available for uptake and translocation. Degradation is the main mechanism for the dissipation of selected compounds in biosolids applied soils, and the presence of soybean plants had no significant effect on sorption. Data from two different harvests suggest that the uptake from soil to root and translocation from root to leaf may be rate limited for triclosan and triclocarban and metabolism may occur within the plant for carbamazepine.

  14. Plant uptake/bioavailability of heavy metals from the contaminated soil after treatment with humus soil and hydroxyapatite.

    PubMed

    Misra, Virendra; Chaturvedi, Pranav Kumar

    2007-10-01

    Uptake /bioavailability study using the Indian mustard plant (Brassica juncea) was undertaken at the interval of 7, 14 and 21 days to test the immobilization of heavy metals from contaminated soil that were amended with humus soil and/or hydroxyapatite. For this, four sets consisting of non-humus soil + metals (Cd, Cr, Ni and Pb), humus soil + metals, non-humus and humus soil in the ratio of 1:3 + metals and non-humus soil: humus soil in the ratio of 1:3 + metals + 1% hydroxyapatite were prepared. The bioavailability of Pb, Cd, Cr and Ni in non-humus soil system was 58%, 67%, 65% and 63%, respectively in 7 days, more than 80% in 14 days and more than 90% in 21 days. Use of non-humus, humus soil in the ratio of 1:3 and addition of 1% hydroxyapatite decreased the bioavailability of lead around 21 to 22.5%, Cd 35 to 36%, Cr 25.5 to 26.9%, Ni 34 to 39% in 7, 14 and 21 days. Apart from this increase in the fresh weight of the plant was also noticed during the experiment. The data showed that addition of 1% hydroxyapatite in the non-humus-humus soil system caused the increase in the fresh weight around 90% in 7, 14 and 21 days as compared to plant grown in non-humus and metal soil system.

  15. Antidiabetic II drug metformin in plants: uptake and translocation to edible parts of cereals, oily seeds, beans, tomato, squash, carrots, and potatoes.

    PubMed

    Eggen, Trine; Lillo, Cathrine

    2012-07-18

    Residues of pharmaceuticals present in wastewater and sewage sludge are of concern due to their transfer to aquatic and terrestrial food chains and possible adverse effects on nontargeted organisms. In the present work, uptake and translocation of metformin, an antidiabetic II medicine, by edible plant species cultivated in agricultural soil have been investigated in greenhouse experiment. Metformin demonstrated a high uptake and translocation to oily seeds of rape ( Brassica napus cv. Sheik and Brassica rapa cv. Valo); expressed as an average bioconcentration factor (BCF, plant concentration over initial concentration in soil, both in dry weight), BCF values as high as 21.72 were measured. In comparison, BCFs for grains of the cereals wheat, barley, and oat were in the range of 0.29-1.35. Uptake and translocation to fruits and vegetables of tomato (BCFs 0.02-0.06), squash (BCFs 0.12-0.18), and bean (BCF 0.88) were also low compared to rape. BCFs for carrot, potato, and leaf forage B. napus cv. Sola were similar (BCF 1-4). Guanylurea, a known degradation product of metformin by microorganisms in activated sludge, was found in barley grains, bean pods, potato peel, and small potatoes. The mechanisms for transport of metformin and guanidine in plants are still unknown, whereas organic cation transporters (OCTs) in mammals are known to actively transport such compounds and may guide the way for further understanding of mechanisms also in plants.

  16. Antidiabetic II drug metformin in plants: uptake and translocation to edible parts of cereals, oily seeds, beans, tomato, squash, carrots, and potatoes.

    PubMed

    Eggen, Trine; Lillo, Cathrine

    2012-07-18

    Residues of pharmaceuticals present in wastewater and sewage sludge are of concern due to their transfer to aquatic and terrestrial food chains and possible adverse effects on nontargeted organisms. In the present work, uptake and translocation of metformin, an antidiabetic II medicine, by edible plant species cultivated in agricultural soil have been investigated in greenhouse experiment. Metformin demonstrated a high uptake and translocation to oily seeds of rape ( Brassica napus cv. Sheik and Brassica rapa cv. Valo); expressed as an average bioconcentration factor (BCF, plant concentration over initial concentration in soil, both in dry weight), BCF values as high as 21.72 were measured. In comparison, BCFs for grains of the cereals wheat, barley, and oat were in the range of 0.29-1.35. Uptake and translocation to fruits and vegetables of tomato (BCFs 0.02-0.06), squash (BCFs 0.12-0.18), and bean (BCF 0.88) were also low compared to rape. BCFs for carrot, potato, and leaf forage B. napus cv. Sola were similar (BCF 1-4). Guanylurea, a known degradation product of metformin by microorganisms in activated sludge, was found in barley grains, bean pods, potato peel, and small potatoes. The mechanisms for transport of metformin and guanidine in plants are still unknown, whereas organic cation transporters (OCTs) in mammals are known to actively transport such compounds and may guide the way for further understanding of mechanisms also in plants. PMID:22712757

  17. Comparative oligonucleotide fingerprints of three plant viroids.

    PubMed Central

    Gross, H J; Domdey, H; Sänger, H L

    1977-01-01

    5' Phosphorylation in vitro with gamma-32P-ATP and T4 phage induced polynucleotide kinase was used to obtain RNAase A and RNAase T1 fingerprints of three plant viroids: Potato spindle tuber viroid from tomato (PSTV-tom), chrysanthemum stunt viroid from cineraria (ChSV-cin) and citrus exocortis viroid from Gynura aurantiaca (CEV-gyn). These three viroids differ significantly from each other as judged from their oligonucleotide patterns. This supports the concept of individual viroid species. Images PMID:896482

  18. Effect of submergence-emergence sequence and organic matter or aluminosilicate amendment on metal uptake by woody wetland plant species from contaminated sediments.

    PubMed

    Vandecasteele, Bart; Du Laing, Gijs; Tack, Filip M G

    2007-01-01

    Site-specific hydrological conditions affect the availability of trace metals for vegetation. In a greenhouse experiment, the effect of submersion on the metal uptake by the wetland plant species Salix cinerea and Populus nigra grown on a contaminated dredged sediment-derived soil and on an uncontaminated soil was evaluated. An upland hydrological regime for the polluted sediment caused elevated Cd concentrations in leaves and cuttings for both species. Emergence and soil oxidation after initial submersion of a polluted sediment resulted in comparable foliar Cd and Zn concentrations for S. cinerea as for the constant upland treatment. The foliar Cd and Zn concentrations were clearly higher than for submerged soils after initial upland conditions. These results point at the importance of submergence-emergence sequence for plant metal availability. The addition of foliar-based organic matter or aluminosilicates to the polluted sediment-derived soil in upland conditions did not decrease Cd and Zn uptake by S. cinerea.

  19. Soil-to-plant halogens transfer studies 1. Root uptake of radioiodine by plants.

    PubMed

    Kashparov, V; Colle, C; Zvarich, S; Yoschenko, V; Levchuk, S; Lundin, S

    2005-01-01

    Long-term controlled experiments under natural conditions in the field have been carried out in the Chernobyl Exclusion zone in order to determine the parameters governing radioiodine transfer to plants from four types of soils (podzoluvisol, greyzem and typical and meadow chernozem) homogeneously contaminated in the 20-cm upper layer with an addition of (125)I. An absence of (125)I depletion in arable soil layers due to volatilization was noted up to one year after contamination. During one year, depletion due to the vertical migration of radioiodine from the arable layer of each of the soils did not exceed 4% of the total (125)I content. Radioiodine concentration ratios (CR) were obtained in radish roots, lettuce leaves, bean pods, and wheat grain and straw. The highest CR values were observed in podzoluvisol: 0.01-0.03 for radish roots and lettuce leaves, 0.003-0.004 for bean pods and 0.001 for wheat grains. In the other three soils, these values were one order of magnitude lower. The parameters relating to changes in radioiodine bioavailability were determined, based on the contamination dynamics of plants in field conditions. PMID:15603907

  20. Gramene 2016: comparative plant genomics and pathway resources

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the data...

  1. Comparative Plant Genomics Resources at PlantGDB1

    PubMed Central

    Dong, Qunfeng; Lawrence, Carolyn J.; Schlueter, Shannon D.; Wilkerson, Matthew D.; Kurtz, Stefan; Lushbough, Carol; Brendel, Volker

    2005-01-01

    PlantGDB (http://www.plantgdb.org/) is a database of plant molecular sequences. Expressed sequence tag (EST) sequences are assembled into contigs that represent tentative unique genes. EST contigs are functionally annotated with information derived from known protein sequences that are highly similar to the putative translation products. Tentative Gene Ontology terms are assigned to match those of the similar sequences identified. Genome survey sequences are assembled similarly. The resulting genome survey sequence contigs are matched to ESTs and conserved protein homologs to identify putative full-length open reading frame-containing genes, which are subsequently provisionally classified according to established gene family designations. For Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa), the exon-intron boundaries for gene structures are annotated by spliced alignment of ESTs and full-length cDNAs to their respective complete genome sequences. Unique genome browsers have been developed to present all available EST and cDNA evidence for current transcript models (for Arabidopsis, see the AtGDB site at http://www.plantgdb.org/AtGDB/; for rice, see the OsGDB site at http://www.plantgdb.org/OsGDB/). In addition, a number of bioinformatic tools have been integrated at PlantGDB that enable researchers to carry out sequence analyses on-site using both their own data and data residing within the database. PMID:16219921

  2. Modeling regulation of zinc uptake via ZIP transporters in yeast and plant roots.

    PubMed

    Claus, Juliane; Chavarría-Krauser, Andrés

    2012-01-01

    In yeast (Saccharomyces cerevisiae) and plant roots (Arabidopsis thaliana) zinc enters the cells via influx transporters of the ZIP family. Since zinc is both essential for cell function and toxic at high concentrations, tight regulation is essential for cell viability. We provide new insight into the underlying mechanisms, starting from a general model based on ordinary differential equations and adapting it to the specific cases of yeast and plant root cells. In yeast, zinc is transported by the transporters ZRT1 and ZRT2, which are both regulated by the zinc-responsive transcription factor ZAP1. Using biological data, parameters were estimated and analyzed, confirming the different affinities of ZRT1 and ZRT2 reported in the literature. Furthermore, our model suggests that the positive feedback in ZAP1 production has a stabilizing function at high influx rates. In plant roots, various ZIP transporters play a role in zinc uptake. Their regulation is largely unknown, but bZIP transcription factors are thought to be involved. We set up three putative models based on: an activator only, an activator with dimerization and an activator-inhibitor pair. These were fitted to measurements and analyzed. Simulations show that the activator-inhibitor model outperforms the other two in providing robust and stable homeostasis at reasonable parameter ranges.

  3. Effects of elemental sulphur on heavy metal uptake by plants growing on municipal sewage sludge.

    PubMed

    Dede, Gulgun; Ozdemir, Saim

    2016-01-15

    In this study experiment was carried out to determine the phytoextraction potential of six plant species (Conium maculatum, Brassica oleraceae var. oleraceae, Brassica juncea, Datura stramonium, Pelargonium hortorum and Conyza canadensis) grown in a sewage sludge medium amended with metal uptake promoters. The solubility of Cu, Cd and Pb was significantly increased with the application of elemental S due to decrease of pH. Faecal coliform number was markedly decreased by addition of elemental sulphur. The extraction of Cu, Cr and Pb from sewage sludge by using B. juncea plant was observed as 65%, 65% and 54% respectively that is statistically similar to EDTA as sulphur. The bioaccumulation factors were found higher (>1) in the plants tested for Cu and Pb like B. juncea. Translocation index (TI) calculated values for Cd and Pb were greater than one (>1) in both C. maculatum and B. oleraceae var. oleraceae. The results cleared that the amendment of sludge with elemental sulphur showed potential to solubilize heavy metals in phytoremediation as much as EDTA. PMID:26496839

  4. Effects of elemental sulphur on heavy metal uptake by plants growing on municipal sewage sludge.

    PubMed

    Dede, Gulgun; Ozdemir, Saim

    2016-01-15

    In this study experiment was carried out to determine the phytoextraction potential of six plant species (Conium maculatum, Brassica oleraceae var. oleraceae, Brassica juncea, Datura stramonium, Pelargonium hortorum and Conyza canadensis) grown in a sewage sludge medium amended with metal uptake promoters. The solubility of Cu, Cd and Pb was significantly increased with the application of elemental S due to decrease of pH. Faecal coliform number was markedly decreased by addition of elemental sulphur. The extraction of Cu, Cr and Pb from sewage sludge by using B. juncea plant was observed as 65%, 65% and 54% respectively that is statistically similar to EDTA as sulphur. The bioaccumulation factors were found higher (>1) in the plants tested for Cu and Pb like B. juncea. Translocation index (TI) calculated values for Cd and Pb were greater than one (>1) in both C. maculatum and B. oleraceae var. oleraceae. The results cleared that the amendment of sludge with elemental sulphur showed potential to solubilize heavy metals in phytoremediation as much as EDTA.

  5. Short-chain oxygenated VOCs: Emission and uptake by plants and atmospheric sources, sinks, and concentrations

    NASA Astrophysics Data System (ADS)

    Seco, Roger; Peñuelas, Josep; Filella, Iolanda

    Emissions of volatile organic compounds (VOCs) have multiple atmospheric implications and play many roles in plant physiology and ecology. Among these VOCs, growing interest is being devoted to a group of short-chain oxygenated VOCs (oxVOCs). Technology improvements such as proton transfer reaction-mass spectrometry are facilitating the study of these hydrocarbons and new data regarding these compounds is continuously appearing. Here we review current knowledge of the emissions of these oxVOCs by plants and the factors that control them, and also provide an overview of sources, sinks, and concentrations found in the atmosphere. The oxVOCs reviewed here are formic and acetic acids, acetone, formaldehyde, acetaldehyde, methanol, and ethanol. In general, because of their water solubility (low gas-liquid partitioning coefficient), the plant-atmosphere exchange is stomatal-dependent, although it can also take place via the cuticle. This exchange is also determined by atmospheric mixing ratios. These compounds have relatively long atmospheric half-lives and reach considerable concentrations in the atmosphere in the range of ppbv. Likewise, under non-stressed conditions plants can emit all of these oxVOCs together at fluxes ranging from 0.2 up to 4.8 μg(C)g -1(leaf dry weight)h -1 and at rates that increase several-fold when under stress. Gaps in our knowledge regarding the processes involved in the synthesis, emission, uptake, and atmospheric reactivity of oxVOCs precludes the clarification of exactly what is conditioning plant-atmosphere exchange—and also when, how, and why this occurs—and these lacunae therefore warrant further research in this field.

  6. Analysis of peptide uptake and location of root hair-promoting peptide accumulation in plant roots.

    PubMed

    Matsumiya, Yoshiki; Taniguchi, Rikiya; Kubo, Motoki

    2012-03-01

    Peptide uptake by plant roots from degraded soybean-meal products was analyzed in Brassica rapa and Solanum lycopersicum. B. rapa absorbed about 40% of the initial water volume, whereas peptide concentration was decreased by 75% after 24 h. Analysis by reversed-phase HPLC showed that number of peptides was absorbed by the roots during soaking in degraded soybean-meal products for 24 h. Carboxyfluorescein-labeled root hair-promoting peptide was synthesized, and its localization, movement, and accumulation in roots were investigated. The peptide appeared to be absorbed by root hairs and then moved to trichoblasts. Furthermore, the peptide was moved from trichoblasts to atrichoblasts after 24 h. The peptide was accumulated in epidermal cells, suggesting that the peptide may have a function in both trichoblasts and atrichoblasts.

  7. Sputnik: a database platform for comparative plant genomics.

    PubMed

    Rudd, Stephen; Mewes, Hans-Werner; Mayer, Klaus F X

    2003-01-01

    Two million plant ESTs, from 20 different plant species, and totalling more than one 1000 Mbp of DNA sequence, represents a formidable transcriptomic resource. Sputnik uses the potential of this sequence resource to fill some of the information gap in the un-sequenced plant genomes and to serve as the foundation for in silicio comparative plant genomics. The complexity of the individual EST collections has been reduced using optimised EST clustering techniques. Annotation of cluster sequences is performed by exploiting and transferring information from the comprehensive knowledgebase already produced for the completed model plant genome (Arabidopsis thaliana) and by performing additional state of-the-art sequence analyses relevant to today's plant biologist. Functional predictions, comparative analyses and associative annotations for 500 000 plant EST derived peptides make Sputnik (http://mips.gsf.de/proj/sputnik/) a valid platform for contemporary plant genomics.

  8. Sputnik: a database platform for comparative plant genomics.

    PubMed

    Rudd, Stephen; Mewes, Hans-Werner; Mayer, Klaus F X

    2003-01-01

    Two million plant ESTs, from 20 different plant species, and totalling more than one 1000 Mbp of DNA sequence, represents a formidable transcriptomic resource. Sputnik uses the potential of this sequence resource to fill some of the information gap in the un-sequenced plant genomes and to serve as the foundation for in silicio comparative plant genomics. The complexity of the individual EST collections has been reduced using optimised EST clustering techniques. Annotation of cluster sequences is performed by exploiting and transferring information from the comprehensive knowledgebase already produced for the completed model plant genome (Arabidopsis thaliana) and by performing additional state of-the-art sequence analyses relevant to today's plant biologist. Functional predictions, comparative analyses and associative annotations for 500 000 plant EST derived peptides make Sputnik (http://mips.gsf.de/proj/sputnik/) a valid platform for contemporary plant genomics. PMID:12519965

  9. Sputnik: a database platform for comparative plant genomics

    PubMed Central

    Rudd, Stephen; Mewes, Hans-Werner; Mayer, Klaus F.X.

    2003-01-01

    Two million plant ESTs, from 20 different plant species, and totalling more than one 1000 Mbp of DNA sequence, represents a formidable transcriptomic resource. Sputnik uses the potential of this sequence resource to fill some of the information gap in the un-sequenced plant genomes and to serve as the foundation for in silicio comparative plant genomics. The complexity of the individual EST collections has been reduced using optimised EST clustering techniques. Annotation of cluster sequences is performed by exploiting and transferring information from the comprehensive knowledgebase already produced for the completed model plant genome (Arabidopsis thaliana) and by performing additional state of-the-art sequence analyses relevant to today's plant biologist. Functional predictions, comparative analyses and associative annotations for 500 000 plant EST derived peptides make Sputnik (http://mips.gsf.de/proj/sputnik/) a valid platform for contemporary plant genomics. PMID:12519965

  10. A Framework to Predict Uptake of Trace Organic Compounds by Plants.

    PubMed

    Kumar, Kuldip; Gupta, Satish C

    2016-03-01

    Application of manure, biosolids, and recycled wastewater to croplands could be a potential pathway through which trace organic compounds (TOrCs) may be taken up by food crops. We present a framework to prepare a short list of TOrCs for detailed risk assessment and evaluation in terms of bioaccumulation. The framework was modified from Lipinski's method to predict drug permeability based on four critical properties: (i) molecular weight (MW); (ii) lipophilicity (expressed as log, the octanol-water partition coefficient); (iii) H-bond acceptors; and (iv) H-bond donors. The literature shows that the compounds with MW ranging from 200 to 500 can readily diffuse through mammalian membranes, the uptake of compounds with log >5 is hindered, and an excessive number of H-bond donors and H-bond acceptors reduces the permeability across a mammalian membrane bilayer. In general, mammalian and plant membranes are similar in structure and functions. Based on these four properties, we developed the "Rule of 3," which states that greater absorption and higher permeability of a TOrC is likely when its log is <3, its MW is <300, H-bond donors are <3, and H-bond acceptors are <6. Applicability of the framework was tested with published data, which showed that uptake and bioaccumulation of TOrCs in plants decreased in the order: Rule of 3 > Rule of 3 to 5 (log between 3 and 5, MW between 300 and 500, H-bond acceptors between 3 and 6, and H-bond donors between 3 and 5) > Rule of 5 (log >5, MW >500, H-bond acceptors >10, and H-bond donors <5). We conclude that TOrCs following the "Rule of 3" could be prioritized for detailed risk assessment involving dietary exposure. PMID:27065403

  11. Assessment of plant-driven uptake and translocation of clofibric acid by Scirpus validus.

    PubMed

    Zhang, Dong Qing; Gersberg, Richard M; Hua, Tao; Zhu, Junfei; Ng, Wun Jern; Tan, Soon Keat

    2013-07-01

    Pharmaceutical compounds are now considered as emerging contaminants of environmental concern. The overall objective of this study was to evaluate the uptake and translocation of clofibric acid (CA) by the macrophyte Scirpus validus growing hydroponically. A set of the three replicates was established for each exposure time and for each CA concentration. Plants were grown in 4 L vessels (four plants per vessel corresponding to the three exposure period studies, i.e., 7, 14, 18, and 21 days) which contained an aerated modified Hoagland nutrient solution that was spiked with CA at concentrations of 0.5, 1.0, and 2.0 mg L(-1). At each exposure period, CA concentration was measured in the nutrient solutions. A sea sand disruption method was employed for the extraction of CA from plant tissues. The determination of the pharmaceutical concentration was carried out using solid phase extraction (SPE) followed by chromatographic analysis. The quantification of CA concentrations in both nutrient solutions (after SPE) and plant tissues (after extraction) was conducted by chromatographic analysis. CA concentrations of 5.4-26.8 μg g(-1) (fresh weight) were detected in the roots and 7.2-34.6 μg g(-1) (fresh weight) in the shoots after 21 days. Mass balance calculations showed that S. validus uptake alone accounted for a significant contribution (6-13% for the roots and 22-49% for the shoots) of the total loss of CA. The bioaccumulation factors (BAFs) based on fresh weight for the roots ranged from 6.6 to 23.2, while values for the shoots ranged from 9.5 to 32.1. All the BAFs for the shoots were greater than those in the roots, implying that CA has greater tendency to be translocated to the shoots, rather than the roots of S. validus. All the shoot-to-root concentration ratios were more than 1, denoting that the shoots of S. validus do preferentially accumulate CA. We demonstrated that CA can be actively taken up, subsequently translocated and accumulated by aboveground

  12. Mannitol alleviates chromium toxicity in wheat plants in relation to growth, yield, stimulation of anti-oxidative enzymes, oxidative stress and Cr uptake in sand and soil media.

    PubMed

    Adrees, Muhammad; Ali, Shafaqat; Iqbal, Muhammad; Aslam Bharwana, Saima; Siddiqi, Zeenat; Farid, Mujahid; Ali, Qasim; Saeed, Rashid; Rizwan, Muhammad

    2015-12-01

    Chromium (Cr) is one of the most phytotoxic metals in the agricultural soils and its concentration is continuously increasing mainly through anthropogenic activities. Little is known on the role of mannitol (M) on plant growth and physiology under metal stress. The aim of this study was to investigate the mechanism of growth amelioration and antioxidant enzyme activities in Cr-stressed wheat (Triticum aestivum L. cv. Lasani 2008) by exogenously applied mannitol. For this, wheat seedlings were sown in pots containing soil or sand and subjected to increasing Cr concentration (0, 0.25 and 0.5mM) in the form of of K2Cr2O7 with and without foliar application of 100mM mannitol. Plants were harvested after four months and data regarding growth characteristics, biomass, photosynthetic pigments, and antioxidant enzymes were recorded. Mannitol application increased plant biomass, photosynthetic pigments and antioxidant enzymes while decreased Cr uptake and accumulation in plants as compared to Cr treatments alone. In this study, we observed that M applied exogenously to Cr-stressed wheat plants, which normally cannot synthesize M, improved their Cr tolerance by increasing growth, photosynthetic pigments and enhancing activities of antioxidant enzymes and by decreasing Cr uptake and translocation in wheat plants. From this study, it can be concluded that M could be used to grow crops on marginally contaminated soils for which separate remediation techniques are time consuming and not cost effective.

  13. Water uptake and growth of cucumber plants (Cucumis sativus L.) under control of dissolved O2 concentration in hydroponics.

    PubMed

    Yoshida, S; Kitano, M; Eguchi, H

    1996-12-01

    Dissolved O2 concentration ([O2]) in nutrient solution was controlled at 0.01, 0.10 and 0.20 mM with accuracy of +/- 0.005 mM in a newly developed hydroponic system, and the effects of [O2] on water uptake and growth of cucumber plants (Cucumis sativus L.) were analyzed. For evaluating water uptake rate under the control of [O2], water flux at the stem base was measured on-line with +/-5% in accuracy, 1 mg s-1 in resolution and 1 min in time constant by heat flux control (HFC) method. Water uptake rate was drastically increased by lighting to the plant at each [O2], and water uptake per day was depressed in proportion to decrease in [O2]. In the plants grown for 10 days, leaf area, fresh weight and dry weight of leaves decreased at lower [O2], while stem length and number of leaves were scarcely affected. These facts suggest that membrane permeability of root cells reduces at lower [O2] through respiration-dependent processes, and growth is inhibited through leaf turgor loss caused by the depressed water uptake of roots in O2-deficient nutrient solution in hydroponics.

  14. The uptake and distribution of cadmium in tomato plants as affected by ethylenediaminetetraacetic acid and 2,4-dinitrophenol.

    PubMed

    Wolterbeek, H T; van der Meer, A; de Bruin, M

    1988-01-01

    The uptake and distribution of cadmium in tomato plants (Lycopersicon esculentum, Mill, cv. Tiny Tim) were examined with and without the presence of ethylenediaminetetraacetic acid (EDTA) as chelating agent and 2,4-dinitrophenol (DNP) as metabolic inhibitor. Eight-week-old intact and derooted tomato seedlings were used in hydroculture experiments with cadmium applied as (115)Cd(NO(3))(2) in a range of concentrations. Measurements of the (115)Cd content of roots, stems and leaves were carried out by gamma-ray spectroscopy. The data showed that applications of both EDTA and DNP resulted in reduced total Cd accumulation in the plants, but relatively enhanced Cd transport into the above-ground plant parts. The Cd mobility in the transport channels in the shoots was increased by EDTA in both intact and derooted plants. Application of DNP leads to increased relative Cd import to leaves in derooted plants, but a reduced import into leaves of intact plants. These results suggest that Cd-complexes are formed in root cells before root-to-shoot transport. Furthermore, initial Cd uptake may be associated with adsorption on the negative charges of the cell walls of the root system. The high Cd mobility in shoots, in experiments with intact plants and Cd-EDTA application, indicates the possibility of simultaneous uptake of Cd and EDTA, possibly as a Cd-EDTA complex. PMID:15092498

  15. Comparative proteomics of root plasma membrane proteins reveals the involvement of calcium signalling in NaCl-facilitated nitrate uptake in Salicornia europaea

    PubMed Central

    Nie, Lingling; Feng, Juanjuan; Fan, Pengxiang; Chen, Xianyang; Guo, Jie; Lv, Sulian; Bao, Hexigeduleng; Jia, Weitao; Tai, Fang; Jiang, Ping; Wang, Jinhui; Li, Yinxin

    2015-01-01

    Improving crop nitrogen (N) use efficiency under salinity is essential for the development of sustainable agriculture in marginal lands. Salicornia europaea is a succulent euhalophyte that can survive under high salinity and N-deficient habitat conditions, implying that a special N assimilation mechanism may exist in this plant. In this study, phenotypic and physiological changes of S. europaea were investigated under different nitrate and NaCl levels. The results showed that NaCl had a synergetic effect with nitrate on the growth of S. europaea. In addition, the shoot nitrate concentration and nitrate uptake rate of S. europaea were increased by NaCl treatment under both low N and high N conditions, suggesting that nitrate uptake in S. europaea was NaCl facilitated. Comparative proteomic analysis of root plasma membrane (PM) proteins revealed 81 proteins, whose abundance changed significantly in response to NaCl and nitrate. These proteins are involved in metabolism, cell signalling, transport, protein folding, membrane trafficking, and cell structure. Among them, eight proteins were calcium signalling components, and the accumulation of seven of the above-mentioned proteins was significantly elevated by NaCl treatment. Furthermore, cytosolic Ca2+ concentration ([Ca2+]cyt) was significantly elevated in S. europaea under NaCl treatment. The application of the Ca2+ channel blocker LaCl3 not only caused a decrease in nitrate uptake rate, but also attenuated the promoting effects of NaCl on nitrate uptake rates. Based on these results, a possible regulatory network of NaCl-facilitated nitrate uptake in S. europaea focusing on the involvement of Ca2+ signalling was proposed. PMID:25956883

  16. Inter-varietal variation in caesium and strontium uptake by plants: a meta-analysis.

    PubMed

    Penrose, B; Beresford, N A; Broadley, M R; Crout, N M J

    2015-01-01

    Radiocaesium and radiostrontium enter the foodchain primarily via plant root uptake. Selecting varieties of crop that display low accumulation of these radionuclides has been suggested as an economically and socially acceptable remediation strategy for radiologically contaminated land. However, there is insufficient information available to assess the feasibility of this remediation approach. This paper presents a comprehensive literature-based evaluation of inter-varietal variation in accumulation of Cs and Sr in crop plants. Thirty-seven publications studying 27 plant species were identified as appropriate for these analyses. Inter-varietal variation was expressed at the ratio of the maximum to minimum observed concentrations for a given crop species and element and ranged from 1.0 to 6.3 and from 1.0 to 4.5 for Cs and Sr respectively. This variation suggests that exploitation of inter-varietal variation could be used in some crop species to reduce the transfer of these radionuclides to a similar extent to existing remediation strategies. Low-Sr accumulating varieties were also found to have lower concentrations of Ca, whereas low Cs-accumulating varieties were not shown to have low K accumulation. Concentrations of Cs and Sr in plants were not related, suggesting that finding varieties displaying low accumulation of both Sr and Cs may not be feasible. Varietal selection could be an effective remediation strategy, and could be used in combination with other existing methods, such as fertilisation and ploughing. However, a thorough investigation of species contributing the most to ingestion doses is recommended to fully determine the feasibility of varietal selection as a remediation strategy. The reproducibility of inter-varietal variation between sites and growing seasons should be the focus of future research. PMID:25464046

  17. Inter-varietal variation in caesium and strontium uptake by plants: a meta-analysis.

    PubMed

    Penrose, B; Beresford, N A; Broadley, M R; Crout, N M J

    2015-01-01

    Radiocaesium and radiostrontium enter the foodchain primarily via plant root uptake. Selecting varieties of crop that display low accumulation of these radionuclides has been suggested as an economically and socially acceptable remediation strategy for radiologically contaminated land. However, there is insufficient information available to assess the feasibility of this remediation approach. This paper presents a comprehensive literature-based evaluation of inter-varietal variation in accumulation of Cs and Sr in crop plants. Thirty-seven publications studying 27 plant species were identified as appropriate for these analyses. Inter-varietal variation was expressed at the ratio of the maximum to minimum observed concentrations for a given crop species and element and ranged from 1.0 to 6.3 and from 1.0 to 4.5 for Cs and Sr respectively. This variation suggests that exploitation of inter-varietal variation could be used in some crop species to reduce the transfer of these radionuclides to a similar extent to existing remediation strategies. Low-Sr accumulating varieties were also found to have lower concentrations of Ca, whereas low Cs-accumulating varieties were not shown to have low K accumulation. Concentrations of Cs and Sr in plants were not related, suggesting that finding varieties displaying low accumulation of both Sr and Cs may not be feasible. Varietal selection could be an effective remediation strategy, and could be used in combination with other existing methods, such as fertilisation and ploughing. However, a thorough investigation of species contributing the most to ingestion doses is recommended to fully determine the feasibility of varietal selection as a remediation strategy. The reproducibility of inter-varietal variation between sites and growing seasons should be the focus of future research.

  18. Conocarpus biochar as a soil amendment for reducing heavy metal availability and uptake by maize plants

    PubMed Central

    Al-Wabel, Mohammad I.; Usman, Adel R.A.; El-Naggar, Ahmed H.; Aly, Anwar A.; Ibrahim, Hesham M.; Elmaghraby, Salem; Al-Omran, Abdulrasoul

    2014-01-01

    The objective of this study was to assess the use of Concarpus biochar as a soil amendment for reducing heavy metal accessibility and uptake by maize plants (Zea mays L.). The impacts of biochar rates (0.0, 1.0, 3.0, and 5.0% w/w) and two soil moisture levels (75% and 100% of field capacity, FC) on immobilization and availability of Fe, Mn, Zn, Cd, Cu and Pb to maize plants as well as its application effects on soil pH, EC, bulk density, and moisture content were evaluated using heavy metal-contaminated soil collected from mining area. The biochar addition significantly decreased the bulk density and increased moisture content of soil. Applying biochar significantly reduced NH4OAc- or AB-DTPA-extractable heavy metal concentrations of soils, indicating metal immobilization. Conocarpus biochar increased shoot dry biomass of maize plants by 54.5–102% at 75% FC and 133–266% at 100% FC. Moreover, applying biochar significantly reduced shoot heavy metal concentrations in maize plants (except for Fe at 75% FC) in response to increasing application rates, with a highest decrease of 51.3% and 60.5% for Mn, 28% and 21.2% for Zn, 60% and 29.5% for Cu, 53.2% and 47.2% for Cd at soil moisture levels of 75% FC and 100% FC, respectively. The results suggest that biochar may be effectively used as a soil amendment for heavy metal immobilization and in reducing its phytotoxicity. PMID:26150758

  19. Speciation and degradation of triphenyltin in typical paddy fields and its uptake into rice plants.

    PubMed

    Antes, Fabiane G; Krupp, Eva; Flores, Erico M M; Dressler, Valderi L; Feldmann, Joerg

    2011-12-15

    Triphenyltin (TPhT) is a biocide used worldwide in agriculture, especially in rice crop farming. The distribution and dissipation of TPhT in rice fields, as well as uptake of TPhT and other phenyltin compounds (monophenyltin, MPhT, and diphenyltin, DPhT) is still unknown at present. In this study, speciation analysis of phenyltin compounds was carried out in soil and water from a rice field where TPhT was applied during rice seeding according to legal application rates in Brazil. The results indicate the degradation of biocide and distribution of tin species into soil and water. To evaluate whether TPhT is taken up by plants, rice plants were exposed to three different TPhT application rates in a controlled mesocosm during 7 weeks. After this period, tin speciation was determined in soil, roots, leaves, and grains of rice. Degradation of TPhT was observed in soil, where DPhT and MPhT were detected. MPhT, DPhT, and TPhT were also detected in the roots of plants exposed to all TPhT application rates. Only TPhT was detected in leaves and at relatively low concentration, suggesting selective transport of TPhT in the xylem, in contrast to DPhT and MPhT. Concentration of phenyltin species in rice grains was lower than the limit of detection, suggesting that rice plants do not have the capability to take up TPhT from soil and transport it to the grains.

  20. Conocarpus biochar as a soil amendment for reducing heavy metal availability and uptake by maize plants.

    PubMed

    Al-Wabel, Mohammad I; Usman, Adel R A; El-Naggar, Ahmed H; Aly, Anwar A; Ibrahim, Hesham M; Elmaghraby, Salem; Al-Omran, Abdulrasoul

    2015-07-01

    The objective of this study was to assess the use of Concarpus biochar as a soil amendment for reducing heavy metal accessibility and uptake by maize plants (Zea mays L.). The impacts of biochar rates (0.0, 1.0, 3.0, and 5.0% w/w) and two soil moisture levels (75% and 100% of field capacity, FC) on immobilization and availability of Fe, Mn, Zn, Cd, Cu and Pb to maize plants as well as its application effects on soil pH, EC, bulk density, and moisture content were evaluated using heavy metal-contaminated soil collected from mining area. The biochar addition significantly decreased the bulk density and increased moisture content of soil. Applying biochar significantly reduced NH4OAc- or AB-DTPA-extractable heavy metal concentrations of soils, indicating metal immobilization. Conocarpus biochar increased shoot dry biomass of maize plants by 54.5-102% at 75% FC and 133-266% at 100% FC. Moreover, applying biochar significantly reduced shoot heavy metal concentrations in maize plants (except for Fe at 75% FC) in response to increasing application rates, with a highest decrease of 51.3% and 60.5% for Mn, 28% and 21.2% for Zn, 60% and 29.5% for Cu, 53.2% and 47.2% for Cd at soil moisture levels of 75% FC and 100% FC, respectively. The results suggest that biochar may be effectively used as a soil amendment for heavy metal immobilization and in reducing its phytotoxicity.

  1. PLUTONIUM UPTAKE AND BEHAVIOR IN PLANTS OF THE DESERT SOUTHWEST: A PRELIMINARY ASSESSMENT

    SciTech Connect

    Caldwell, E.; Duff, M.; Ferguson, C.

    2011-03-01

    Eight species of desert vegetation and associated soils were collected from the Nevada National Security Site (N2S2) and analyzed for 238Pu and 239+240Pu concentrations. Amongst the plant species sampled were: atmospheric elemental accumulators (moss and lichen), the very slow growing, long-lived creosote bush and the rapidly growing, short-lived cheatgrass brome. The diversity of growth strategies provided insight into the geochemical behavior and bio-availability of Pu at the N2S2. The highest concentrations of Pu were measured in the onion moss (24.27 Bq kg-1 238Pu and 52.78 Bq kg-1 239+240Pu) followed by the rimmed navel lichen (8.18 Bq kg-1 and 18.4 Bq kg-1 respectively), pointing to the importance of eolian transport of Pu. Brome and desert globemallow accumulated between 3 and 9 times higher concentrations of Pu than creosote and sage brush species. These results support the importance of species specific elemental accumulation strategies rather than exposure duration as the dominant variable influencing Pu concentrations in these plants. Total vegetation elemental concentrations of Ce, Fe, Al, Sm and others were also analyzed. Strong correlations were observed between Fe and Pu. This supports the conclusion that Pu was accumulated as a consequence of the active accumulation of Fe and other plant required nutrients. Cerium and Pu are considered to be chemical analogs. Strong correlations observed in plants support the conclusion that these elements displayed similar geochemical behavior in the environment as it related to the biochemical uptake process of vegetation. Soils were also sampled in association with vegetation samples. This allowed for the calculation of a concentration ratio (CR). The CR values for Pu in plants were highly influenced by the heterogeneity of Pu distribution among sites. Results from the naturally occurring elements of concern were more evenly distributed between sample sites. This allowed for the development of a pattern of plant

  2. Heavy-metal-contaminated industrial soil: Uptake assessment in native plant species from Brazilian Cerrado.

    PubMed

    Meyer, Sylvia Therese; Castro, Samuel Rodrigues; Fernandes, Marcus Manoel; Soares, Aylton Carlos; de Souza Freitas, Guilherme Augusto; Ribeiro, Edvan

    2016-08-01

    Plants of the Cerrado have shown some potential for restoration and/or phytoremediation projects due to their ability to grow in and tolerate acidic soils rich in metals. The aim of this study is to evaluate the tolerance and accumulation of metals (Cd, Cu, Pb, and Zn) in five native tree species of the Brazilian Cerrado (Copaifera langsdorffii, Eugenia dysenterica, Inga laurina, Cedrela fissilis, Handroanthus impetiginosus) subjected to three experiments with contaminated soils obtained from a zinc processing industry (S1, S2, S3) and control soil (S0). The experimental design was completely randomized (factorial 5 × 4 × 3) and conducted in a greenhouse environment during a 90-day experimentation time. The plant species behavior was assessed by visual symptoms of toxicity, tolerance index (TI), translocation factor (TF), and bioaccumulation factor (BF). C. fissilis has performed as a Zn accumulator by the higher BFs obtained in the experiments, equal to 3.72, 0.88, and 0.41 for S1, S2, and S3 respectively. This species had some ability of uptake control as a defense mechanism in high stress conditions with the best behavior for phytoremediation and high tolerance to contamination. With economical and technical benefits, this study may support a preliminary analysis necessary for using native tree species in environmental projects. PMID:26852633

  3. Screening of metal uptake by plant colonizers growing on abandoned copper mine in Kapunda, South Australia.

    PubMed

    Nirola, Ramkrishna; Megharaj, Mallavarapu; Aryal, Rupak; Naidu, Ravi

    2016-01-01

    Systematic site survey for sample collection and analysis was conducted at a derelict copper (Cu) mine at Kapunda, South Australia. Cu concentrations in the soils at this former mine ranged from 65-10107 mg kg(-1). The pH and EC varied widely in the 3.9-8.4 and 152-7311 µS ranges, respectively. Nine plant species growing over the copper mine site were selected to screen for metal uptake to determine their suitability for phytoremediation. The Australian native tree species Eucalyptus camaldulensis indicated enrichment factor (EF) of 2.17, 1.89, and 1.30 for Cu, Zn, and Pb, respectively, suggesting that this species of tree can accumulate these metals to some degree. The stress-resistant exotic olive, Olea europaea exhibited EF of ≤ 0.01 for Cu, Cd, and Pb, and 0.29 for Zn, which is characteristic of an excluder plant. Acacia pycnantha, the Australian pioneer legume species with EF 0.03, 0.80, 0.32, and 0.01 for Cu, Zn, Cd, and Pb, respectively, emerged as another strong metal excluder and consequently as an ideal metal stabilizer. PMID:26552328

  4. Improving Lowland Rice (O. sativa L. cv. MR219) Plant Growth Variables, Nutrients Uptake, and Nutrients Recovery Using Crude Humic Substances.

    PubMed

    Palanivell, Perumal; Ahmed, Osumanu Haruna; Ab Majid, Nik Muhamad; Jalloh, Mohamadu Boyie; Susilawati, Kasim

    2015-01-01

    High cation exchange capacity and organic matter content of crude humic substances from compost could be exploited to reduce ammonia loss from urea and to as well improve rice growth and soil chemical properties for efficient nutrients utilization in lowland rice cultivation. Close-dynamic air flow system was used to determine the effects of crude humic substances on ammonia volatilization. A pot experiment was conducted to determine the effects of crude humic substances on rice plant growth, nutrients uptake, nutrients recovery, and soil chemical properties using an acid soil mixed with three rates of crude humic substances (20, 40, and 60 g pot(-1)). Standard procedures were used to evaluate rice plant dry matter production, nutrients uptake, nutrients recovery, and soil chemical properties. Application of crude humic substances increased ammonia volatilization. However, the lowest rate of crude humic substances (20 g pot(-1)) significantly improved total dry matter, nutrients uptake, nutrients recovery, and soil nutrients availability compared with crude humic substances (40 and 60 g pot(-1)) and the normal fertilization. Apart from improving growth of rice plants, crude humic substances can be used to ameliorate acid soils in rice cultivation. The findings of this study are being validated in our ongoing field trials.

  5. Improving Lowland Rice (O. sativa L. cv. MR219) Plant Growth Variables, Nutrients Uptake, and Nutrients Recovery Using Crude Humic Substances

    PubMed Central

    Palanivell, Perumal; Ahmed, Osumanu Haruna; Ab Majid, Nik Muhamad; Jalloh, Mohamadu Boyie; Susilawati, Kasim

    2015-01-01

    High cation exchange capacity and organic matter content of crude humic substances from compost could be exploited to reduce ammonia loss from urea and to as well improve rice growth and soil chemical properties for efficient nutrients utilization in lowland rice cultivation. Close-dynamic air flow system was used to determine the effects of crude humic substances on ammonia volatilization. A pot experiment was conducted to determine the effects of crude humic substances on rice plant growth, nutrients uptake, nutrients recovery, and soil chemical properties using an acid soil mixed with three rates of crude humic substances (20, 40, and 60 g pot−1). Standard procedures were used to evaluate rice plant dry matter production, nutrients uptake, nutrients recovery, and soil chemical properties. Application of crude humic substances increased ammonia volatilization. However, the lowest rate of crude humic substances (20 g pot−1) significantly improved total dry matter, nutrients uptake, nutrients recovery, and soil nutrients availability compared with crude humic substances (40 and 60 g pot−1) and the normal fertilization. Apart from improving growth of rice plants, crude humic substances can be used to ameliorate acid soils in rice cultivation. The findings of this study are being validated in our ongoing field trials. PMID:25977938

  6. Characterizing the Solid-Solution Coefficient and Plant Uptake Factor of As, Cd and Pb in California Croplands

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In risk assessment models, the solid-solution partition coefficient (Kd), and plant uptake factor (PUF), are often employed to model the fate and transport of trace elements in soils. The trustworthiness of risk assessments depends on the reliability of the parameters used. In this study, we exami...

  7. UPTAKE AND PHYTOTRANSFORMATION OF O,P'-DDT AND P,P'-DDT BY AXENICALLY CULTIVATED AQUATIC PLANTS

    EPA Science Inventory

    The uptake and phytotransformation of o,p'-DDT and p,p'-DDT were investigated in vitro using three axenically cultivated aquatic plants: parrot feather (Mariophyllum aquaticum), duckweed (Spirodela oligorrhiza), and elodea (Elodea canadensis). The decay profile of DDT from the aq...

  8. [Characterizing the plant uptake factor of As, Cd and Pb for rice and wheat cereal].

    PubMed

    Zhang, Hong-zhen; Luo, Yong-ming; Zhang, Hai-bo; Song, Jing; Chen, Yong-shan; Xia, Jia-qi; Zhao, Qi-guo

    2010-02-01

    The statistical characteristics of plant uptake factor (PUF) of As, Cd and Pb for rice/wheat cereal were analyzed and summarized based on collected data in China. The data were selected and distinguished between field investigation and glasshouse experiment in which metal salts were added to clean soils as grown media. Results showed that the PUF median and range of As, Cd and Pb for rice cereal were 0.026 (0.004-0.090), 0.150 (0.014-1.470), 0.005 (0.001-0.031) and 0.010 (0.003-0.033), 0.360 (0.056-1.700), 0.002 (0.001-0.019) for field investigation and salt added experiment respectively. The PUF median and range of As, Cd and Pb for wheat cereal were 0.010 (0.001-0.110), 0.190 (0.030-2.110), 0.017 (0.001-0.075) and 0.010 (0.003-0.028), 0.150 (0.055-0.730), 0.001 (0.001-0.014) for field investigation and salt added experiment respectively. Significant PUF distribution differences were found between field investigation and salt added experiment. PUF provided not exactly predictive ability of metal uptake by crops since the PUF values were influenced by a variety of factors including the soil contamination levels, basic soils characteristics, the cultivation of the crops and other environmental conditions. However, the ln (PUF) followed Gaussian distribution (R2 = 0.38-0.94) which is useful for general risk assessment and soil benchmark derivation of contaminated croplands. Use of these statistical models is restricted to the range of data they have been derived, as extrapolation outside this range is often unreliable. Soil properties and surrounding environment of the crops should also be in accordance with the conditions PUF derived.

  9. [Characterizing the plant uptake factor of As, Cd and Pb for rice and wheat cereal].

    PubMed

    Zhang, Hong-zhen; Luo, Yong-ming; Zhang, Hai-bo; Song, Jing; Chen, Yong-shan; Xia, Jia-qi; Zhao, Qi-guo

    2010-02-01

    The statistical characteristics of plant uptake factor (PUF) of As, Cd and Pb for rice/wheat cereal were analyzed and summarized based on collected data in China. The data were selected and distinguished between field investigation and glasshouse experiment in which metal salts were added to clean soils as grown media. Results showed that the PUF median and range of As, Cd and Pb for rice cereal were 0.026 (0.004-0.090), 0.150 (0.014-1.470), 0.005 (0.001-0.031) and 0.010 (0.003-0.033), 0.360 (0.056-1.700), 0.002 (0.001-0.019) for field investigation and salt added experiment respectively. The PUF median and range of As, Cd and Pb for wheat cereal were 0.010 (0.001-0.110), 0.190 (0.030-2.110), 0.017 (0.001-0.075) and 0.010 (0.003-0.028), 0.150 (0.055-0.730), 0.001 (0.001-0.014) for field investigation and salt added experiment respectively. Significant PUF distribution differences were found between field investigation and salt added experiment. PUF provided not exactly predictive ability of metal uptake by crops since the PUF values were influenced by a variety of factors including the soil contamination levels, basic soils characteristics, the cultivation of the crops and other environmental conditions. However, the ln (PUF) followed Gaussian distribution (R2 = 0.38-0.94) which is useful for general risk assessment and soil benchmark derivation of contaminated croplands. Use of these statistical models is restricted to the range of data they have been derived, as extrapolation outside this range is often unreliable. Soil properties and surrounding environment of the crops should also be in accordance with the conditions PUF derived. PMID:20391722

  10. Effect of heavy-metal-resistant bacteria on enhanced metal uptake and translocation of the Cu-tolerant plant, Elsholtzia splendens.

    PubMed

    Xu, Chen; Chen, Xincai; Duan, Dechao; Peng, Cheng; Le, Thu; Shi, Jiyan

    2015-04-01

    A hydroponics trial was employed to study the effects of Pseudomonas putida CZ1 (CZ1), a heavy-metal-resistant bacterial strain isolated from the rhizosphere of Elsholtzia splendens (E. splendens), on the uptake and translocation of copper (Cu) in E. splendens. Significant promotion of plant growth coupled with the obvious plant-growth-promoting (PGP) characters of the bacteria suggested that CZ1 would be a plant-growth-promoting rhizobacterium (PGPR) to E. splendens under Cu stress condition. The results of inductively coupled plasma optical emission spectrometry (ICP-OES) showed that CZ1 increased the concentration of Cu in the shoots (up to 211.6% compared to non-inoculation treatment) and translocation factor (TF) (from 0.56 to 1.83%) of those exposed to Cu. The distribution of Cu in root cross section measured by synchrotron-based X-ray fluorescence microscopy (SRXRF) indicated that CZ1 promoted the transport of Cu from cortex to xylem in roots, which contributed to the accumulation of Cu in shoots. Furthermore, CZ1 improved the uptake of nutrient elements by plants to oppose to the toxicity of Cu. In summary, P. putida CZ1 acted as a PGPR in resistance to Cu and promoted the accumulation and translocation of Cu from root to shoot by element redistribution in plant root; hence, CZ1 is a promising assistance to phytoremediation.

  11. Modeling the carbon cost of plant nitrogen acquisition: Mycorrhizal trade-offs and multipath resistance uptake improve predictions of retranslocation

    NASA Astrophysics Data System (ADS)

    Brzostek, Edward R.; Fisher, Joshua B.; Phillips, Richard P.

    2014-08-01

    Accurate projections of the future land carbon (C) sink by terrestrial biosphere models depend on how nutrient constraints on net primary production are represented. While nutrient limitation is nearly universal, current models do not have a C cost for plant nutrient acquisition. Also missing are symbiotic mycorrhizal fungi, which can consume up to 20% of net primary production and supply up to 50% of a plant's nitrogen (N) uptake. Here we integrate simultaneous uptake and mycorrhizae into a cutting-edge plant N model—Fixation and Uptake of Nitrogen (FUN)—that can be coupled into terrestrial biosphere models. The C cost of N acquisition varies as a function of mycorrhizal type, with plants that support arbuscular mycorrhizae benefiting when N is relatively abundant and plants that support ectomycorrhizae benefiting when N is strongly limiting. Across six temperate forested sites (representing arbuscular mycorrhizal- and ectomycorrhizal-dominated stands and 176 site years), including multipath resistance improved the partitioning of N uptake between aboveground and belowground sources. Integrating mycorrhizae led to further improvements in predictions of N uptake from soil (R2 = 0.69 increased to R2 = 0.96) and from senescing leaves (R2 = 0.29 increased to R2 = 0.73) relative to the original model. On average, 5% and 9% of net primary production in arbuscular mycorrhizal- and ectomycorrhizal-dominated forests, respectively, was needed to support mycorrhizal-mediated acquisition of N. To the extent that resource constraints to net primary production are governed by similar trade-offs across all terrestrial ecosystems, integrating these improvements to FUN into terrestrial biosphere models should enhance predictions of the future land C sink.

  12. Can phosphate compounds be used to reduce the plant uptake of Pb and resist the Pb stress in Pb-contaminated soils?

    PubMed

    Chen, Shibao; Chen, Li; Ma, Yibing; Huang, Yizong

    2009-01-01

    The effects of different phosphate-amendments on lead (Pb) uptake, the activities of superoxide dismutase (SOD) and the level of malondialdehyde (MDA) in cauliflower (Brassica oleracea L.) in contaminated soils with 2500, or 5000 mg P20s/kg soil of hydroxyapatite (HA), phosphate rock (PR), single-superphosphate (SSP) and the mix of HA/SSP (HASSP) were evaluated in pot experiments. Results showed that the Pb concentrations in shoots and roots decreased by 18.3%-51.6% and 16.8%-57.3% among the treatments respectively compared to the control samples. The efficiency order of these phosphate-amendments in reducing Pb uptake was as follows: HASSP approximately equal HA > SSP approximately equal PR. With the addition of SSP, HA and the mix of HA/SSP, the SOD activity in shoot was reduced markedly (P < 0.05) compared with that in the control group. For example, the SOD activities in shoot by the treatments of HASSP, SSP, and HA in 5000 mg P2O5/kg were found to be only 51.3%, 56.2%, and 56.7%, respectively. Similar effects were also observed on the level of MDA in the shoots with a decrease in 24.5%-56.3%. The results verified the inference that phosphate compounds could be used to reduce the plant uptake of Pb and resist the Pb stress in the plant vegetated in Pb-contaminated soils.

  13. Can phosphate compounds be used to reduce the plant uptake of Pb and resist the Pb stress in Pb-contaminated soils?

    PubMed

    Chen, Shibao; Chen, Li; Ma, Yibing; Huang, Yizong

    2009-01-01

    The effects of different phosphate-amendments on lead (Pb) uptake, the activities of superoxide dismutase (SOD) and the level of malondialdehyde (MDA) in cauliflower (Brassica oleracea L.) in contaminated soils with 2500, or 5000 mg P20s/kg soil of hydroxyapatite (HA), phosphate rock (PR), single-superphosphate (SSP) and the mix of HA/SSP (HASSP) were evaluated in pot experiments. Results showed that the Pb concentrations in shoots and roots decreased by 18.3%-51.6% and 16.8%-57.3% among the treatments respectively compared to the control samples. The efficiency order of these phosphate-amendments in reducing Pb uptake was as follows: HASSP approximately equal HA > SSP approximately equal PR. With the addition of SSP, HA and the mix of HA/SSP, the SOD activity in shoot was reduced markedly (P < 0.05) compared with that in the control group. For example, the SOD activities in shoot by the treatments of HASSP, SSP, and HA in 5000 mg P2O5/kg were found to be only 51.3%, 56.2%, and 56.7%, respectively. Similar effects were also observed on the level of MDA in the shoots with a decrease in 24.5%-56.3%. The results verified the inference that phosphate compounds could be used to reduce the plant uptake of Pb and resist the Pb stress in the plant vegetated in Pb-contaminated soils. PMID:19634449

  14. Soil contamination and plant uptake of heavy metals at polluted sites in China.

    PubMed

    Wang, Qing-Ren; Cui, Yan-Shan; Liu, Xiu-Mei; Dong, Yi-Ting; Christie, Peter

    2003-05-01

    We investigated heavy metal contamination in soils and plants at polluted sites in China including some with heavy industries, metal mining, smelting and untreated wastewater irrigation areas. We report our main findings in this paper. The concentrations of heavy metals, including Cd and Zn, in the soils at the investigated sites were above the background levels, and generally exceeded the Government guidelines for metals in soil. The concentrations of metals in plants served to indicate the metal contamination status of the site, and also revealed the abilities of various plant species to take up and accumulate the metals from the soil. Substantial differences in the accumulation of heavy metals were observed among the plant species investigated. Polygonum hydropiper growing on contaminated soils in a sewage pond had accumulated 1061 mg kg(-1) of Zn in its shoots. Rumex acetosa L. growing near a smelter had accumulated more than 900 mg kg(-1) of Zn both in its shoots and roots. Therefore these species have potential for phytoremediation of metal-contaminated sites. Our results indicate the need to elucidate the dynamics of soil metal contamination of plants and the onward movement of metal contaminants into the food chain. Also our results indicate that the consumption of rice grown in paddy soils contaminated with Cd, Cr or Zn may pose a serious risk to human health, because from 24 to 22% of the total metal content in the rice biomass was concentrated in the rice grain. Platanus acerifolia growing on heavily contaminated soil accumulated only very low levels of heavy metals, and this mechanism for excluding metal uptake may have value in crop improvement. Sources of metal entering the environmental matrices studied included untreated wastewater, tailings or slurries and dust depositions from metal ore mining, and sewage sludge. Pb, Zn or Cd concentrations declined with the distance from metal smelter in accordance with a good exponential correlation (R2

  15. Comparing concentration-based (AOT40) and stomatal uptake (PODY) metrics for ozone risk assessment to European forests.

    PubMed

    Anav, Alessandro; De Marco, Alessandra; Proietti, Chiara; Alessandri, Andrea; Dell'Aquila, Alessandro; Cionni, Irene; Friedlingstein, Pierre; Khvorostyanov, Dmitry; Menut, Laurent; Paoletti, Elena; Sicard, Pierre; Sitch, Stephen; Vitale, Marcello

    2016-04-01

    Tropospheric ozone (O3) produces harmful effects to forests and crops, leading to a reduction of land carbon assimilation that, consequently, influences the land sink and the crop yield production. To assess the potential negative O3 impacts to vegetation, the European Union uses the Accumulated Ozone over Threshold of 40 ppb (AOT40). This index has been chosen for its simplicity and flexibility in handling different ecosystems as well as for its linear relationships with yield or biomass loss. However, AOT40 does not give any information on the physiological O3 uptake into the leaves since it does not include any environmental constraints to O3 uptake through stomata. Therefore, an index based on stomatal O3 uptake (i.e. PODY), which describes the amount of O3 entering into the leaves, would be more appropriate. Specifically, the PODY metric considers the effects of multiple climatic factors, vegetation characteristics and local and phenological inputs rather than the only atmospheric O3 concentration. For this reason, the use of PODY in the O3 risk assessment for vegetation is becoming recommended. We compare different potential O3 risk assessments based on two methodologies (i.e. AOT40 and stomatal O3 uptake) using a framework of mesoscale models that produces hourly meteorological and O3 data at high spatial resolution (12 km) over Europe for the time period 2000-2005. Results indicate a remarkable spatial and temporal inconsistency between the two indices, suggesting that a new definition of European legislative standard is needed in the near future. Besides, our risk assessment based on AOT40 shows a good consistency compared to both in-situ data and other model-based datasets. Conversely, risk assessment based on stomatal O3 uptake shows different spatial patterns compared to other model-based datasets. This strong inconsistency can be likely related to a different vegetation cover and its associated parameterizations. PMID:26492093

  16. Comparing concentration-based (AOT40) and stomatal uptake (PODY) metrics for ozone risk assessment to European forests.

    PubMed

    Anav, Alessandro; De Marco, Alessandra; Proietti, Chiara; Alessandri, Andrea; Dell'Aquila, Alessandro; Cionni, Irene; Friedlingstein, Pierre; Khvorostyanov, Dmitry; Menut, Laurent; Paoletti, Elena; Sicard, Pierre; Sitch, Stephen; Vitale, Marcello

    2016-04-01

    Tropospheric ozone (O3) produces harmful effects to forests and crops, leading to a reduction of land carbon assimilation that, consequently, influences the land sink and the crop yield production. To assess the potential negative O3 impacts to vegetation, the European Union uses the Accumulated Ozone over Threshold of 40 ppb (AOT40). This index has been chosen for its simplicity and flexibility in handling different ecosystems as well as for its linear relationships with yield or biomass loss. However, AOT40 does not give any information on the physiological O3 uptake into the leaves since it does not include any environmental constraints to O3 uptake through stomata. Therefore, an index based on stomatal O3 uptake (i.e. PODY), which describes the amount of O3 entering into the leaves, would be more appropriate. Specifically, the PODY metric considers the effects of multiple climatic factors, vegetation characteristics and local and phenological inputs rather than the only atmospheric O3 concentration. For this reason, the use of PODY in the O3 risk assessment for vegetation is becoming recommended. We compare different potential O3 risk assessments based on two methodologies (i.e. AOT40 and stomatal O3 uptake) using a framework of mesoscale models that produces hourly meteorological and O3 data at high spatial resolution (12 km) over Europe for the time period 2000-2005. Results indicate a remarkable spatial and temporal inconsistency between the two indices, suggesting that a new definition of European legislative standard is needed in the near future. Besides, our risk assessment based on AOT40 shows a good consistency compared to both in-situ data and other model-based datasets. Conversely, risk assessment based on stomatal O3 uptake shows different spatial patterns compared to other model-based datasets. This strong inconsistency can be likely related to a different vegetation cover and its associated parameterizations.

  17. Prediction of methyl mercury uptake by rice plants ( Oryza sativa L.) using the diffusive gradient in thin films technique.

    PubMed

    Liu, Jinling; Feng, Xinbin; Qiu, Guangle; Anderson, Christopher W N; Yao, Heng

    2012-10-16

    Rice consumption is the primary pathway for methyl mercury (MeHg) exposure at inland mercury (Hg) mining areas of SW China. Mechanistic information on MeHg accumulation in rice is, however, limited. The process of MeHg exchange between paddy soil and rice plants predominantly occurs in pore water. The detection of bioavailable MeHg in pore water is therefore important to predict MeHg uptake by rice plants ( Oryza sativa L.). This study investigated MeHg dynamics and spatial MeHg trends in pore water during the rice growing season using the diffusive gradient in thin films (DGT) technique and tested the ability of DGT to predict MeHg uptake by rice. The MeHg uptake flux from soil to rice plants via roots was significantly correlated with the DGT-measured MeHg flux (R = 0.853, p < 0.01). Our study implies that DGT can predict the bioavailability of MeHg in rice paddy soil and that the DGT method can provide quantitative description of the rate of uptake of this bioavailable MeHg. The DGT technique is demonstrated as a useful indicator of the likely ecotoxicological risk that might be apparent where paddy rice is grown in MeHg contaminated soil.

  18. Uptake of the cyanobacterial neurotoxin, anatoxin-a, and alterations in oxidative stress in the submerged aquatic plant Ceratophyllum demersum.

    PubMed

    Ha, Mi-Hee; Contardo-Jara, Valeska; Pflugmacher, Stephan

    2014-03-01

    The prevalence of cyanobacterial blooms in fresh water bodies worldwide has become a serious environmental problem. The blooms can increase the occurrence of cyanobacterial neurotoxin, anatoxin-a, and this toxin can interact with aquatic plants and other pivotal components of aquatic ecosystems. Despite this, several questions regarding the uptake of the toxin by aquatic plants and its association with toxic effects still remain. This study investigated the uptake of anatoxin-a in relation to alterations in oxidative stress, estimated by changes in lipid peroxidation and tocopherol contents (alpha-, beta-, gamma-, and delta-tocopherol), in the submerged aquatic plant, Ceratophylum demersum, at environmentally relevant concentrations. Exposure to five different concentrations of anatoxin-a (0.005, 0.05, 0.5, 5 and 50μgl(-1)) for 24h increased concentrations in C. demersum in a dose-dependent manner. All four forms of tocopherols were elevated at low concentrations of anatoxin-a (0.005. 0.05. 0.5 and 5μgl(-1)). However, a decline in the four tocopherol forms along with a high level of lipid peroxidation was observed at 50μgl(-1) exposure dose. During 336-h exposure to 15μgl(-1) anatoxin-a, rapid toxin uptake during the first 24h and subsequent steady accumulation of the toxin were observed. The four tocopherol forms increased in response to anatoxin-a uptake, attaining their maximum levels together with a significant increase of lipid peroxidation after 12 or 24h. After 24-h exposure, the four tocopherol forms decreased gradually without recovery. The results clearly indicate that anatoxin-a uptake can cause a disturbance of the oxidative stress in the aquatic plant, and depending on the concentration and exposure duration, oxidative damage occurs. PMID:24507147

  19. Effect of thallium fractions in the soil and pollution origins on Tl uptake by hyperaccumulator plants: a key factor for the assessment of phytoextraction.

    PubMed

    Al-Najar, H; Kaschl, A; Schulz, R; Römheld, V

    2005-01-01

    Phytoremediation is often discussed as a means of extracting trace metals in excess in the soil, but to increase its efficiency a better understanding of the factors controlling plant uptake is required. The main objective of this study was to examine the effect of origin (anthropogenic vs. geogenic) and mobility of thallium (Tl) in the rhizosphere on Tl uptake. Two Tl-hyperaccumulating Brassicaceae species, kale (Brassica oleracea acephala L. cv. Winterbor F1) and candytuft (Iberis intermedia Guers.), were grown in a rhizobox system to investigate the dynamics of Tl in the rhizosphere soil. Four different soils were used. Two soils contained high Tl amounts due to anthropogenic sources (emissions from a cement plant and mining activities). High Tl content in the two other soils was due to a high rock content (geogenic origin). On completion of growth in the rhizoboxes, the depletion of Tl in seven different chemical fractions, determined by sequential extraction, was compared to the plant uptake. Most of the Tl taken up was derived from the so-called "easily accessible" fractions in both soils with geogenic Tl as well as in the soils polluted by mining activities. Due to the small amounts of easily accessible Tl in the geogenic soils, Tl uptake by Brassicaceae was low. On the other hand, for the air emission-polluted soil, a high depletion of Tl from "less accessible" fractions was observed in addition to depletion of the easily accessible fractions. Hence, the latter soil demonstrated the highest potential for effective soil decontamination by phytoextraction within an appropriate time frame.

  20. Seasonal plant water uptake patterns in the saline southeast Everglades ecotone.

    PubMed

    Ewe, Sharon M L; Sternberg, Leonel da S L; Childers, Daniel L

    2007-07-01

    The purpose of this study was to determine the seasonal water use patterns of dominant macrophytes coexisting in the coastal Everglades ecotone. We measured the stable isotope signatures in plant xylem water of Rhizophora mangle, Cladium jamaicense, and Sesuvium portulacastrum during the dry (DS) and wet (WS) seasons in the estuarine ecotone along Taylor River in Everglades National Park, FL, USA. Shallow soilwater and deeper groundwater salinity was also measured to extrapolate the salinity encountered by plants at their rooting zone. Average soil water oxygen isotope ratios (delta(18)O) was enriched (4.8 +/- 0.2 per thousand) in the DS relative to the WS (0.0 +/- 0.1 per thousand), but groundwater delta(18)O remained constant between seasons (DS: 2.2 +/- 0.4 per thousand; WS: 2.1 +/- 0.1 per thousand). There was an inversion in interstitial salinity patterns across the soil profile between seasons. In the DS, shallow water was euhaline [i.e., 43 practical salinity units (PSU)] while groundwater was less saline (18 PSU). In the WS, however, shallow water was fresh (i.e., 0 PSU) but groundwater remained brackish (14 PSU). All plants utilized 100% (shallow) freshwater during the WS, but in the DS R. mangle switched to a soil-groundwater mix (delta 55% groundwater) while C. jamaicense and S. portulacastrum continued to use euhaline shallow water. In the DS, based on delta(18)O data, the roots of R. mangle roots were exposed to salinities of 25.4 +/- 1.4 PSU, less saline than either C. jamaicense (39.1 +/- 2.2 PSU) or S. portulacastrum (38.6 +/- 2.5 PSU). Although the salinity tolerance of C. jamaicense is not known, it is unlikely that long-term exposure to high salinity is conducive to the persistence of this freshwater marsh sedge. This study increases our ecological understanding of how water uptake patterns of individual plants can contribute to ecosystem levels changes, not only in the southeast saline Everglades, but also in estuaries in general in response to

  1. Studies on water transport through the sweet cherry fruit surface: IX. Comparing permeability in water uptake and transpiration.

    PubMed

    Beyer, Marco; Lau, Steffen; Knoche, Moritz

    2005-01-01

    self-diffusion of water across ES or CM was higher than for osmotic water uptake and decreased with increasing stomatal density. The data indicate that viscous flow along an aqueous continuum across the sweet cherry fruit exocarp and across the astomatous CM of selected species accounted for the higher permeability during water uptake as compared to self-diffusion or transpiration.

  2. Studies on water transport through the sweet cherry fruit surface: IX. Comparing permeability in water uptake and transpiration.

    PubMed

    Beyer, Marco; Lau, Steffen; Knoche, Moritz

    2005-01-01

    self-diffusion of water across ES or CM was higher than for osmotic water uptake and decreased with increasing stomatal density. The data indicate that viscous flow along an aqueous continuum across the sweet cherry fruit exocarp and across the astomatous CM of selected species accounted for the higher permeability during water uptake as compared to self-diffusion or transpiration. PMID:15338307

  3. Molecular characterization of a novel heavy metal uptake transporter from higher plants and its potential for use in phytoremediation. 1997 annual progress report

    SciTech Connect

    Schroeder, J.I.

    1997-01-01

    'In the following the author reports on progress on the Department of Energy Grant from the Office of Energy Research and Office of Environmental Management on the topic of Molecular characterization of a novel heavy metal uptake transporter from higher plants and its potential use in phytoremediation. In this research the authors are investigating the following hypotheses: (1) A novel metal transporter cDNA isolated in my lab functions as a plasma membrane heavy metal and uptake transporter in plants roots. (2.) Over-expression of this cDNA in plants can be used to enhance plasma membrane metal uptake into plant tissues.'

  4. Some Are More Equal - A Comparative Study on Swab Uptake and Release of Bacterial Suspensions

    PubMed Central

    Warnke, Philipp; Warning, Liesa; Podbielski, Andreas

    2014-01-01

    Objectives Swabs are widely used to collect samples for microbiological analyses from various clinical settings. They vary by material, size, and structure of the tip. This study investigates the uptake and release capacities for liquid and bacteria. Methods Five swabs were analyzed for their uptake and release capacities of Staphylococcus aureus and Staphylococcus epidermidis suspensions. Two approaches were investigated providing volume-restricted and unrestricted amounts of bacterial suspensions to mimic various clinical situations. Volume and bacterial uptake and release were measured in milligrams and by counting colony forming units (CFU), respectively. Results Volume uptake and release in the unrestricted setting varied highly significant between 239.6 mg and 88.7 mg (p<0.001) and between 65.2 mg and 2.2 mg (p<0.001), respectively. In the volume-restricted setting the complete volume was absorbed by all swabs, volume release could only be detected for flocked swabs (2.7 mg; p<0.001). Highest amount of CFU release was detected for the MWE Dryswab in the unrestricted setting for both S. aureus and S. epidermidis with 1544 CFU and 553 CFU, respectively, lowest release for the Sarstedt neutral swab with 32 CFU and 17 CFU, respectively (p<0.001). In the volume-restricted setting MWE Σ-Swab released the highest bacterial amount with 135 CFU S. aureus and 55 CFU S. epidermidis, respectively, the lowest amount was released by Mast Mastaswab with 2 CFU S. aureus and 1 CFU S. epidermidis, respectively (p<0.001). Within the range of the utilized bacterial concentrations, uptake/release ratios were identical for the particular swab types and independent of the bacterial species. Conclusions The influence of the swab type on subsequent diagnostic results is often underestimated. Uptake and release of the investigated bacteria vary significantly between different swab types and sampling conditions. For best diagnostic outcome swabs should be chosen according to the

  5. Manganese uptake and accumulation by the hyperaccumulator plant Phytolacca acinosa Roxb. (Phytolaccaceae).

    PubMed

    Xue, S G; Chen, Y X; Reeves, Roger D; Baker, Alan J M; Lin, Q; Fernando, Denise R

    2004-10-01

    The perennial herb Phytolacca acinosa Roxb. (Phytolaccaceae), which occurs in Southern China, has been found to be a new manganese hyperaccumulator by means of field surveys on Mn-rich soils and by glasshouse experiments. This species not only has remarkable tolerance to Mn but also has extraordinary uptake and accumulation capacity for this element. The maximum Mn concentration in the leaf dry matter was 19,300 microg/g on Xiangtan Mn tailings wastelands, with a mean of 14,480 microg/g. Under nutrient solution culture conditions, P. acinosa could grow normally with Mn supplied at a concentration of 8000 micromol/l, although with less biomass than in control samples supplied with Mn at 5 micromol/l. Manganese concentration in the shoots increased with increasing external Mn levels, but the total mass of Mn accumulated in the shoots first increased and then decreased. At an Mn concentration of 5000 micromol/l in the culture solution, the Mn accumulation in the shoot dry matter was highest (258 mg/plant). However, the Mn concentration in the leaves reached its highest value (36,380 microg/g) at an Mn supply level of 12,000 micromol/l. These results confirm that P. acinosa is an Mn hyperaccumulator which grows rapidly, has substantial biomass, wide distribution and a broad ecological amplitude. This species provides a new plant resource for exploring the mechanism of Mn hyperaccumulation, and has potential for use in the phytoremediation of Mn-contaminated soils. PMID:15261402

  6. Major controlling factors and prediction models for arsenic uptake from soil to wheat plants.

    PubMed

    Dai, Yunchao; Lv, Jialong; Liu, Ke; Zhao, Xiaoyan; Cao, Yingfei

    2016-08-01

    The application of current Chinese agriculture soil quality standards fails to evaluate the land utilization functions appropriately due to the diversity of soil properties and plant species. Therefore, the standards should be amended. A greenhouse experiment was conducted to investigate arsenic (As) enrichment in various soils from 18 Chinese provinces in parallel with As transfer to 8 wheat varieties. The goal of the study was to build and calibrate soil-wheat threshold models to forecast the As threshold of wheat soils. In Shaanxi soils, Wanmai and Jimai were the most sensitive and insensitive wheat varieties, respectively; and in Jiangxi soils, Zhengmai and Xumai were the most sensitive and insensitive wheat varieties, respectively. Relationships between soil properties and the bioconcentration factor (BCF) were built based on stepwise multiple linear regressions. Soil pH was the best predictor of BCF, and after normalizing the regression equation (Log BCF=0.2054 pH- 3.2055, R(2)=0.8474, n=14, p<0.001), we obtained a calibrated model. Using the calibrated model, a continuous soil-wheat threshold equation (HC5=10((-0.2054 pH+2.9935))+9.2) was obtained for the species-sensitive distribution curve, which was built on Chinese food safety standards. The threshold equation is a helpful tool that can be applied to estimate As uptake from soil to wheat. PMID:27151676

  7. Hexavalent chromium damages chamomile plants by alteration of antioxidants and its uptake is prevented by calcium.

    PubMed

    Kováčik, Jozef; Babula, Petr; Hedbavny, Josef; Klejdus, Bořivoj

    2014-05-30

    Toxicity of low (3μM) and high (60 and 120μM) concentrations of hexavalent chromium/Cr(VI) in chamomile plants was studied. Fluorescence staining confirmed reduction of Cr(VI) to Cr(III). Cr was mainly accumulated in the roots with translocation factor <0.007. Notwithstanding this, both shoots and roots revealed increase in oxidative stress and depletion of glutathione, total thiols, ascorbic acid and activities of glutathione reductase and partially ascorbate peroxidase mainly at 120μM Cr. Though some protective mechanisms were detected (elevation of nitric oxide, enhancement of GPX activity and increase in phenols and lignin), this was not sufficient to counteract the oxidative damage. Consequently, soluble proteins, tissue water content and biomass production were considerably depleted. Surprising increase in some mineral nutrients in roots (Ca, Fe, Zn and Cu) was also detected. Subsequent experiment confirmed that exogenous calcium suppressed oxidative symptoms and Cr uptake but growth of chamomile seedlings was not improved. Alteration of naturally present reductants could be a reason for Cr(III) signal detected using specific fluorescence reagent: in vitro assay confirmed disappearance of ascorbic acid in equimolar mixture with dichromate (>96% at pH 4 and 7) while such response of glutathione was substantially less visible. PMID:24727012

  8. Major controlling factors and prediction models for arsenic uptake from soil to wheat plants.

    PubMed

    Dai, Yunchao; Lv, Jialong; Liu, Ke; Zhao, Xiaoyan; Cao, Yingfei

    2016-08-01

    The application of current Chinese agriculture soil quality standards fails to evaluate the land utilization functions appropriately due to the diversity of soil properties and plant species. Therefore, the standards should be amended. A greenhouse experiment was conducted to investigate arsenic (As) enrichment in various soils from 18 Chinese provinces in parallel with As transfer to 8 wheat varieties. The goal of the study was to build and calibrate soil-wheat threshold models to forecast the As threshold of wheat soils. In Shaanxi soils, Wanmai and Jimai were the most sensitive and insensitive wheat varieties, respectively; and in Jiangxi soils, Zhengmai and Xumai were the most sensitive and insensitive wheat varieties, respectively. Relationships between soil properties and the bioconcentration factor (BCF) were built based on stepwise multiple linear regressions. Soil pH was the best predictor of BCF, and after normalizing the regression equation (Log BCF=0.2054 pH- 3.2055, R(2)=0.8474, n=14, p<0.001), we obtained a calibrated model. Using the calibrated model, a continuous soil-wheat threshold equation (HC5=10((-0.2054 pH+2.9935))+9.2) was obtained for the species-sensitive distribution curve, which was built on Chinese food safety standards. The threshold equation is a helpful tool that can be applied to estimate As uptake from soil to wheat.

  9. Uptake of VOC by sunflower

    NASA Astrophysics Data System (ADS)

    Folkers, A.; Miebach, M.; Kleist, E.; Wildt, J.

    2003-04-01

    To study potential VOC uptake by plants we exposed sunflower (Helianthus annuus) to different VOC in continuously stirred tank reactors. For many VOC like methanol, ethanol, acetone, methylvinylketone, isoprene or limonene no uptake was detectable within the accuracy of our analytic set up. Other VOC like hexanal, octanal, (E)-3-hexenol and nopinone were taken up by sunflower. The uptake was related to stomatal aperture. Obviously, these VOC enter the plants through stomata. In case of hexanal, octanal, and (E)-3-hexenol the uptake was only limited by stomatal aperture implying that these VOC are rapidly metabolised. For nopinone the uptake seems to be limited by a slow metabolization. Estimations of deposition velocities showed that dry deposition of these compounds cannot be neglected as sink if diffusion through stomata is the limiting step for dry deposition. In such cases the lifetime with respect to dry deposiotion is comparable to the lifetime with respect to oxidation by hydroxyl radicals.

  10. Phytozome: a comparative platform for green plant genomics.

    PubMed

    Goodstein, David M; Shu, Shengqiang; Howson, Russell; Neupane, Rochak; Hayes, Richard D; Fazo, Joni; Mitros, Therese; Dirks, William; Hellsten, Uffe; Putnam, Nicholas; Rokhsar, Daniel S

    2012-01-01

    The number of sequenced plant genomes and associated genomic resources is growing rapidly with the advent of both an increased focus on plant genomics from funding agencies, and the application of inexpensive next generation sequencing. To interact with this increasing body of data, we have developed Phytozome (http://www.phytozome.net), a comparative hub for plant genome and gene family data and analysis. Phytozome provides a view of the evolutionary history of every plant gene at the level of sequence, gene structure, gene family and genome organization, while at the same time providing access to the sequences and functional annotations of a growing number (currently 25) of complete plant genomes, including all the land plants and selected algae sequenced at the Joint Genome Institute, as well as selected species sequenced elsewhere. Through a comprehensive plant genome database and web portal, these data and analyses are available to the broader plant science research community, providing powerful comparative genomics tools that help to link model systems with other plants of economic and ecological importance. PMID:22110026

  11. Influence of biologically-active substances on {sup 137}Cs and heavy metals uptake by Barley plant

    SciTech Connect

    Kruglov, Stanislav; Filipas, Alexander

    2007-07-01

    Available in abstract form only. Full text of publication follows: When solving the problem of contaminated agricultural lands rehabilitation, most of attention is concentrated on the effective means which allow the obtaining of ecologically safe production. The minimization of radionuclides and heavy metals (HM) content in farm products on the basis of their migration characteristics in agro-landscapes and with the regard for different factors influencing contaminants behavior in the soil-plant system is of great significance. Our investigation has shown that the effect of biologically active substances (BAS) using for seeds treatment on {sup 137}Cs transfer to barley grown on Cd contaminated soil was dependent on their properties and dosage, characteristics of soil contamination and biological peculiarities of plants, including stage of plants development. Seeds treatment by plant growth regulator Zircon resulted in a significant increase in {sup 137}Cs activity in harvest (40- 50%), increase in K concentration and significant reduction in Ca concentration. Increased Cd content in soil reduced {sup 137}Cs transfer to barley plants by 30-60% (p<0,05) and Zircon application further reduced its concentration. Ambiol and El also reduced {sup 137}Cs uptake by roots and Cd and Pb phyto-toxicity. The experimental data do not make it possible to link the BAS effect on inhibition of {sup 137}Cs absorption by plants directly with their influence on HM phyto-toxicity. The dependence of Concentration Ratio of {sup 137}Cs on the Ambiol and El dose was not proportional and the most significant decrease in the radionuclide uptake by plants was reported with the use of dose showing the most pronounced stimulating effect on the barley growth and development. The pre-sowing seed treatment with Ambiol increased Pb absorption by 35-50% and, on the contrary, decreased Cd uptake by plants by 30-40%. (authors)

  12. Enhanced Cellular Uptake of Silica-Coated Magnetite Nanoparticles Compared with PEG-Coated Ones in Stem Cells.

    PubMed

    Lee, Dong Heon; Kang, Myunggoo; Lee, Hong Jai; Kim, Jeong Ah; Choi, Yun-Kyong; Cho, Hyunjin; Park, Jung-Keug; Park, Tai Hyun; Jung, Hyun

    2015-08-01

    Monodispersed magnetite (Fe3O4) nanoparticles (NPs) were prepared through the thermal decomposition method. The obtained NPs were surface modified with silica (SiO2) and polyethylene glycol (PEG), to enhance their stability in aqueous environment and their cellular uptake efficiency for biomedical applications. The NPs were characterized by X-ray diffraction (XRD), high-resolution transmission electron microscopy (HR-TEM), Fourier transform infrared (FT-IR) spectroscopy, and dynamic light scattering (DLS). The cytotoxicity of these NPs on bone marrow mesenchymal stem cells (BM-MSCs) was measured by MTT assay (cell viability test) at various concentrations (2, 5, 12.5, 25, and 50 µg/mL). The cells remained more than 90% viable at concentrations as high as 50 µg/mL. To compare the cellular uptake efficiency, these NPs were treated in BM-MSCs and the Fe concentration within the cells was measured by inductively coupled plasma-atomic emission spectrometry (ICP-AES) analysis. The uptake process displayed a time- and dose-dependency. The uptake amount of SiO2-coated Fe3O4 (Fe3O4@SiO2) NPs was about 10 times higher than that of the PEG-coated ones (Fe3O4@PEG). PMID:26369110

  13. Enhancing degradation of total petroleum hydrocarbons and uptake of heavy metals in a wetland microcosm planted with Phragmites communis by humic acids addition.

    PubMed

    Sung, Kijune; Kim, Ki Seob; Park, Soyoung

    2013-01-01

    The effects of humic acid (HA) on heavy-metal uptake by plants and degradation of total petroleum hydrocarbons (TPHs) in a wetland microcosm planted with Phragmites communis were evaluated by comparing waterlogged soils and water-drained upland soils. Experiments were conducted on soils artificially contaminated with heavy metals (Pb, Cu, Cd, Ni) and diesel fuel. HA showed a positive influence on biomass increase for all conditions, but more for belowground than aboveground biomass, and lower in contaminated than uncontaminated soil. The bioavailability and leachability factor (BLF) for all heavy metals except Ni increased with HA addition in both the control and the P. communis planted microcosms, suggesting that more heavy metals could be potentially phytoavailable for plant uptake. Microbial activities were not affected by both heavy metals and TPH contamination, and HA effects on stimulating microbial activities were much greater in the contaminated soil than under uncontaminated conditions. HA addition enhanced the degradation of TPH and n-alkane in waterlogged conditions. The results show that HA can increase the remedial performance in P. communis dominated wetlands simultaneously contaminated with heavy metals and petroleum hydrocarbons and thus prevent contamination of groundwater or other adjacent ecosystems.

  14. An experimental set-up to study carbon, water, and nitrate uptake rates by hydroponically grown plants.

    PubMed

    Andriolo, J L; Le Bot, J; Gary, C; Sappe, G; Orlando, P; Brunel, B; Sarrouy, C

    1996-01-01

    The experimental system described allows concomitant hourly measurements of CO2, H2O, and NO3 uptake rates by plants grown hydroponically in a greenhouse. Plants are enclosed in an airtight chamber through which air flows at a controlled speed. Carbon dioxide exchange and transpiration rates are determined from respective differences of concentrations of CO2 and water vapor of the air at the system inlet and outlet. This set-up is based on the "open-system" principle with improvements made on existing systems. For instance, propeller anemometers are used to monitor air flow rates in the chamber. From their signal it is possible to continuously adjust air speed to changing environmental conditions and plant activity. The air temperature inside the system therefore never rises above that outside. Water and NO3 uptake rates are calculated at time intervals from changes in the volume and the NO3 concentration of the nutrient solution in contact with the roots. The precise measurement of the volume of solution is achieved using a balance which has a higher precision than any liquid level sensors. Nitrate concentration is determined in the laboratory from aliquots of solution sampled at time intervals. A number of test runs are reported which validate the measurements and confirm undisturbed conditions within the system. Results of typical diurnal changes in CO2, H2O, and NO3 uptake rates by fruiting tomato plants are also presented.

  15. Light-induced carbon dioxide and oxygen uptake in plant leaves measured by the photoacoustic method.

    PubMed

    Malkin, S; Havaux, M

    2001-10-01

    Leaf discs, enclosed in a photoacoustic (PA) chamber, generate two types of PA gas-uptake signals under certain conditions. Type I is manifested by a severe signal decrease that develops slowly under very low-light intensity and often reaches negative values. It is partially reversed by low-intensity far-red light. Type II occurs transiently in modulated far-red light. It is manifested by a rapid and dramatic decrease of the PA signal, upon the addition of short-wave background light, which is subsequently reversed. It differs from type-I uptake in that it occurs at much higher total light intensities. A thorough study, including modulation frequency and atmospheric composition dependencies, indicates different mechanisms for the two types of uptakes. Type-I uptake results from CO2 accumulation in the PA cell by leaf respiration and reflects modulations in CO2 solubilization. Type-II uptake likely reflects oxygen photoreduction in photosystem I, occurring prior to the activation of photosynthesis (i.e. during photosynthesis induction). This is supported by the complete suppression of type-II uptake when O2 was removed. Also, type-II uptake was only mildly sensitive to CO2 elimination, whereas type-I uptake was totally dependent on the presence of CO2. Type-II uptake consists usually of two uptake waves. Fluorescence transients measured in parallel give further support to the reality and interpretation of these two uptake waves. PA could thus provide a unique opportunity to monitor oxygen photoreduction in vivo with high sensitivity and time resolution.

  16. The effects of repeated planting, planting density, and specific transfer pathways on PCB uptake by Cucurbita pepo grown in field conditions.

    PubMed

    Whitfield Aslund, Melissa L; Rutter, Allison; Reimer, Kenneth J; Zeeb, Barbara A

    2008-11-01

    An in situ field investigation into the potential of PCB phytoextraction by Cucurbita pepo ssp. pepo (pumpkin) plants was continued for a second year at a field site known to be contaminated with a mixture of Aroclors 1254 and 1260 (average soil [PCB]=21 microg/g). Plant stem and leaf PCB concentrations in this second field season (11 and 8.9 microg/g, respectively) were observed to increase significantly from the stem and leaf PCB concentrations reported in the previous year (5.7 and 3.9 microg/g, respectively) while the total biomass produced as well as soil and plant root PCB concentrations did not change. Furthermore, the lower stems of some plants exhibited PCB concentrations as high as 43 microg/g, resulting in bioaccumulation factors (where BAF(plant part)=[PCB](plant part)/[PCB](soil)) for parts of the plant shoot as high as 2. Increased planting density was observed to significantly decrease both plant biomass and plant stem PCB concentrations (to 7.7 microg/g), but did not change plant root PCB concentrations. Finally, the results from this study provided further evidence that that under realistic field conditions, PCB transfer to pumpkin plants was primarily via root uptake and translocation. Other contaminant transfer pathways such as direct soil contamination, atmospheric deposition and volatilization from soil and subsequent redeposition on shoots appeared to have negligible contributions to overall pumpkin plant PCB burdens.

  17. Foliar-applied glyphosate substantially reduced uptake and transport of iron and manganese in sunflower (Helianthus annuus L.) plants.

    PubMed

    Eker, Selim; Ozturk, Levent; Yazici, Atilla; Erenoglu, Bulent; Romheld, Volker; Cakmak, Ismail

    2006-12-27

    Evidence clearly shows that cationic micronutrients in spray solutions reduce the herbicidal effectiveness of glyphosate for weed control due to the formation of metal-glyphosate complexes. The formation of these glyphosate-metal complexes in plant tissue may also impair micronutrient nutrition of nontarget plants when exposed to glyphosate drift or glyphosate residues in soil. In the present study, the effects of simulated glyphosate drift on plant growth and uptake, translocation, and accumulation (tissue concentration) of iron (Fe), manganese (Mn), zinc (Zn), and copper (Cu) were investigated in sunflower (Helianthus annuus L.) plants grown in nutrient solution under controlled environmental conditions. Glyphosate was sprayed on plant shoots at different rates between 1.25 and 6.0% of the recommended dosage (i.e., 0.39 and 1.89 mM glyphosate isopropylamine salt). Glyphosate applications significantly decreased root and shoot dry matter production and chlorophyll concentrations of young leaves and shoot tips. The basal parts of the youngest leaves and shoot tips were severely chlorotic. These effects became apparent within 48 h after the glyphosate spray. Glyphosate also caused substantial decreases in leaf concentration of Fe and Mn while the concentration of Zn and Cu was less affected. In short-term uptake experiments with radiolabeled Fe (59Fe), Mn (54Mn), and Zn (65Zn), root uptake of 59Fe and 54Mn was significantly reduced in 12 and 24 h after application of 6% of the recommended dosage of glyphosate, respectively. Glyphosate resulted in almost complete inhibition of root-to-shoot translocation of 59Fe within 12 h and 54Mn within 24 h after application. These results suggest that glyphosate residues or drift may result in severe impairments in Fe and Mn nutrition of nontarget plants, possibly due to the formation of poorly soluble glyphosate-metal complexes in plant tissues and/or rhizosphere interactions.

  18. Uptake and effects of a mixture of widely used therapeutic drugs in Eruca sativa L. and Zea mays L. plants.

    PubMed

    Marsoni, Milena; De Mattia, Fabrizio; Labra, Massimo; Bruno, Antonia; Bruno, Antonella; Bracale, Marcella; Vannini, Candida

    2014-10-01

    Pharmaceutically active compounds (PACs) are continuously dispersed into the environment due to human and veterinary use, giving rise to their potential accumulation in edible plants. In this study, Eruca sativa L. and Zea mays L. were selected to determine the potential uptake and accumulation of eight different PACs (Salbutamol, Atenolol, Lincomycin, Cyclophosphamide, Carbamazepine, Bezafibrate, Ofloxacin and Ranitidine) designed for human use. To mimic environmental conditions, the plants were grown in pots and irrigated with water spiked with a mixture of PACs at concentrations found in Italian wastewaters and rivers. Moreover, 10× and 100× concentrations of these pharmaceuticals were also tested. The presence of the pharmaceuticals was tested in the edible parts of the plants, namely leaves for E. sativa and grains for Z. mays. Quantification was performed by liquid chromatography mass spectroscopy (LC/MS/MS). In the grains of 100× treated Z. mays, only atenolol, lincomycin and carbamazepine were above the limit of detection (LOD). At the same concentration in E. sativa plants the uptake of all PACs was >LOD. Lincomycin and oflaxacin were above the limit of quantitation in all conditions tested in E. sativa. The results suggest that uptake of some pharmaceuticals from the soil may indeed be a potential transport route to plants and that these environmental pollutants can reach different edible parts of the selected crops. Measurements of the concentrations of these pharmaceuticals in plant materials were used to model potential adult human exposure to these compounds. The results indicate that under the current experimental conditions, crops exposed to the selected pharmaceutical mixture would not have any negative effects on human health. Moreover, no significant differences in the growth of E. sativa or Z. mays plants irrigated with PAC-spiked vs. non-spiked water were observed.

  19. Uptake and effects of a mixture of widely used therapeutic drugs in Eruca sativa L. and Zea mays L. plants.

    PubMed

    Marsoni, Milena; De Mattia, Fabrizio; Labra, Massimo; Bruno, Antonia; Bruno, Antonella; Bracale, Marcella; Vannini, Candida

    2014-10-01

    Pharmaceutically active compounds (PACs) are continuously dispersed into the environment due to human and veterinary use, giving rise to their potential accumulation in edible plants. In this study, Eruca sativa L. and Zea mays L. were selected to determine the potential uptake and accumulation of eight different PACs (Salbutamol, Atenolol, Lincomycin, Cyclophosphamide, Carbamazepine, Bezafibrate, Ofloxacin and Ranitidine) designed for human use. To mimic environmental conditions, the plants were grown in pots and irrigated with water spiked with a mixture of PACs at concentrations found in Italian wastewaters and rivers. Moreover, 10× and 100× concentrations of these pharmaceuticals were also tested. The presence of the pharmaceuticals was tested in the edible parts of the plants, namely leaves for E. sativa and grains for Z. mays. Quantification was performed by liquid chromatography mass spectroscopy (LC/MS/MS). In the grains of 100× treated Z. mays, only atenolol, lincomycin and carbamazepine were above the limit of detection (LOD). At the same concentration in E. sativa plants the uptake of all PACs was >LOD. Lincomycin and oflaxacin were above the limit of quantitation in all conditions tested in E. sativa. The results suggest that uptake of some pharmaceuticals from the soil may indeed be a potential transport route to plants and that these environmental pollutants can reach different edible parts of the selected crops. Measurements of the concentrations of these pharmaceuticals in plant materials were used to model potential adult human exposure to these compounds. The results indicate that under the current experimental conditions, crops exposed to the selected pharmaceutical mixture would not have any negative effects on human health. Moreover, no significant differences in the growth of E. sativa or Z. mays plants irrigated with PAC-spiked vs. non-spiked water were observed. PMID:25042244

  20. Gramene 2016: comparative plant genomics and pathway resources.

    PubMed

    Tello-Ruiz, Marcela K; Stein, Joshua; Wei, Sharon; Preece, Justin; Olson, Andrew; Naithani, Sushma; Amarasinghe, Vindhya; Dharmawardhana, Palitha; Jiao, Yinping; Mulvaney, Joseph; Kumari, Sunita; Chougule, Kapeel; Elser, Justin; Wang, Bo; Thomason, James; Bolser, Daniel M; Kerhornou, Arnaud; Walts, Brandon; Fonseca, Nuno A; Huerta, Laura; Keays, Maria; Tang, Y Amy; Parkinson, Helen; Fabregat, Antonio; McKay, Sheldon; Weiser, Joel; D'Eustachio, Peter; Stein, Lincoln; Petryszak, Robert; Kersey, Paul J; Jaiswal, Pankaj; Ware, Doreen

    2016-01-01

    Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the database website adopted a new Drupal management platform. The genomes section features 39 fully assembled reference genomes that are integrated using ontology-based annotation and comparative analyses, and accessed through both visual and programmatic interfaces. Additional community data, such as genetic variation, expression and methylation, are also mapped for a subset of genomes. The Plant Reactome pathway portal (http://plantreactome.gramene.org) provides a reference resource for analyzing plant metabolic and regulatory pathways. In addition to ∼ 200 curated rice reference pathways, the portal hosts gene homology-based pathway projections for 33 plant species. Both the genome and pathway browsers interface with the EMBL-EBI's Expression Atlas to enable the projection of baseline and differential expression data from curated expression studies in plants. Gramene's archive website (http://archive.gramene.org) continues to provide previously reported resources on comparative maps, markers and QTL. To further aid our users, we have also introduced a live monthly educational webinar series and a Gramene YouTube channel carrying video tutorials.

  1. Gramene 2016: comparative plant genomics and pathway resources

    PubMed Central

    Tello-Ruiz, Marcela K.; Stein, Joshua; Wei, Sharon; Preece, Justin; Olson, Andrew; Naithani, Sushma; Amarasinghe, Vindhya; Dharmawardhana, Palitha; Jiao, Yinping; Mulvaney, Joseph; Kumari, Sunita; Chougule, Kapeel; Elser, Justin; Wang, Bo; Thomason, James; Bolser, Daniel M.; Kerhornou, Arnaud; Walts, Brandon; Fonseca, Nuno A.; Huerta, Laura; Keays, Maria; Tang, Y. Amy; Parkinson, Helen; Fabregat, Antonio; McKay, Sheldon; Weiser, Joel; D'Eustachio, Peter; Stein, Lincoln; Petryszak, Robert; Kersey, Paul J.; Jaiswal, Pankaj; Ware, Doreen

    2016-01-01

    Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the database website adopted a new Drupal management platform. The genomes section features 39 fully assembled reference genomes that are integrated using ontology-based annotation and comparative analyses, and accessed through both visual and programmatic interfaces. Additional community data, such as genetic variation, expression and methylation, are also mapped for a subset of genomes. The Plant Reactome pathway portal (http://plantreactome.gramene.org) provides a reference resource for analyzing plant metabolic and regulatory pathways. In addition to ∼200 curated rice reference pathways, the portal hosts gene homology-based pathway projections for 33 plant species. Both the genome and pathway browsers interface with the EMBL-EBI's Expression Atlas to enable the projection of baseline and differential expression data from curated expression studies in plants. Gramene's archive website (http://archive.gramene.org) continues to provide previously reported resources on comparative maps, markers and QTL. To further aid our users, we have also introduced a live monthly educational webinar series and a Gramene YouTube channel carrying video tutorials. PMID:26553803

  2. Gramene 2016: comparative plant genomics and pathway resources.

    PubMed

    Tello-Ruiz, Marcela K; Stein, Joshua; Wei, Sharon; Preece, Justin; Olson, Andrew; Naithani, Sushma; Amarasinghe, Vindhya; Dharmawardhana, Palitha; Jiao, Yinping; Mulvaney, Joseph; Kumari, Sunita; Chougule, Kapeel; Elser, Justin; Wang, Bo; Thomason, James; Bolser, Daniel M; Kerhornou, Arnaud; Walts, Brandon; Fonseca, Nuno A; Huerta, Laura; Keays, Maria; Tang, Y Amy; Parkinson, Helen; Fabregat, Antonio; McKay, Sheldon; Weiser, Joel; D'Eustachio, Peter; Stein, Lincoln; Petryszak, Robert; Kersey, Paul J; Jaiswal, Pankaj; Ware, Doreen

    2016-01-01

    Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the database website adopted a new Drupal management platform. The genomes section features 39 fully assembled reference genomes that are integrated using ontology-based annotation and comparative analyses, and accessed through both visual and programmatic interfaces. Additional community data, such as genetic variation, expression and methylation, are also mapped for a subset of genomes. The Plant Reactome pathway portal (http://plantreactome.gramene.org) provides a reference resource for analyzing plant metabolic and regulatory pathways. In addition to ∼ 200 curated rice reference pathways, the portal hosts gene homology-based pathway projections for 33 plant species. Both the genome and pathway browsers interface with the EMBL-EBI's Expression Atlas to enable the projection of baseline and differential expression data from curated expression studies in plants. Gramene's archive website (http://archive.gramene.org) continues to provide previously reported resources on comparative maps, markers and QTL. To further aid our users, we have also introduced a live monthly educational webinar series and a Gramene YouTube channel carrying video tutorials. PMID:26553803

  3. Participant uptake of the fecal immunochemical test decreases with the two-sample regimen compared with one-sample FIT

    PubMed Central

    Mosen, David M.; Liles, Elizabeth G.; Feldstein, Adrianne C.; Perrin, Nancy; Rosales, Anna G.; Keast, Erin

    2014-01-01

    Background Fecal immunochemical tests (FITs) are recommended to screen average-risk adults for colorectal cancer (CRC). Little research has examined whether a two-sample FIT affects participant uptake, compared with a one-sample FIT. Examining participant uptake is important, as evidence suggests that a two-sample FIT may increase the sensitivity to detect CRC. Objective This study had two objectives: (i) to evaluate FIT completion in a population that received either a one-sample FIT kit (1-FIT) or a two-sample FIT kit (2-FIT) and (ii) to understand whether uptake varies by age, sex, or receipt of prior CRC screening. Methods We conducted a randomized controlled trial in which 3081 participants who were aged between 50 and 75 years and were at an average risk for CRC, and who had requested FITs, randomly received 1-FIT (n=1540) or 2-FIT (n=1541) kits. FIT completion was defined as the completion and return of a one-sample test by the patients in the 1-FIT group or of both sample tests by those in the 2-FIT group. Cox proportional hazard regression models were used to determine the independent effect of group type (2-FIT vs. 1-FIT) on the completion of the FIT, adjusting for age, sex, and receipt of prior CRC screening. Results The 2-FIT group had lower test completion rates (hazard ratio=0.87; 95% confidence interval=0.78–0.97; P=0.01) after adjusting for age, sex, and receipt of prior CRC screening. Participant uptake did not vary by age, sex, or receipt of prior CRC screening. Conclusion This unique, rigorous randomized controlled trial found that the 2-FIT regimen decreases completion of FIT. Further research is needed to understand whether decreases in participant uptake are offset by increased gains in test sensitivity. PMID:25203483

  4. [Mechanism Study of the Smectite-OR-SH Compound for Reducing Cadmium Uptake by Plants in Contaminated Soils].

    PubMed

    Zeng, Yan-jun; Zhou, Zhi-jun; Zhao, Qiu-xiang

    2015-06-01

    Adsorption and desorption experiments, pot experiments and characterization test were performed to investigate the immobilization effect and mechanism of the smectite-OR-SH compound for reducing cadmium uptake by plants in contaminated soils. The results showed that the saturated adsorption capacity for the adsorption of Cd2+ on smectite raised distinctly after functionalized. The adsorption of Cd2+ on smectite-OR-SH compound was very stable and it was difficult for Cd2+ to be desorbed from it. Crop yields promoted differently in original soil, Cd 3 mg x kg(-1) soil and Cd 10 mg x kg(-1) soil after adding the smectite-OR-SH compound. And the cadmium content of the cabbage reduced 61.00%, 62.10% and 83.73% respectively compare with the control. Characterization test analysis showed that Cd was adsorbed by the compound successfully and ligand interaction occurred between Cd and the thiol group. Floc amount on the compound surface increased correspondingly. In addition to electrostatic adsorption, ion exchange and hydroxyl ligand adsorption, the reaction mechanism of smectite-OR-SH compound with Cd was mainly sulfhydryl ligand adsorption.

  5. Roles for root iron plaque in sequestration and uptake of heavy metals and metalloids in aquatic and wetland plants.

    PubMed

    Tripathi, Rudra D; Tripathi, Preeti; Dwivedi, Sanjay; Kumar, Amit; Mishra, Aradhana; Chauhan, Puneet S; Norton, Gareth J; Nautiyal, Chandra S

    2014-10-01

    Toxic metal(loid) contamination of soil and sediment poses long term risk to soil and human health through plant-human or plant-animal-human food chain pathways. Iron plaque (IP) formation is frequent in aquatic and wetland plant species and is responsible for the sequestration of various metal(loids). The presence of IP may act as a buffer or barrier and may thus enhance or reduce the uptake of potentially phytotoxic metals and metalloids by plants. If IP acts as a barrier, then low IP producing macrophytes/aquatic plants may be better accumulators of toxic metals and may find use in constructed wetlands for remediation of pollutants, while high IP forming edible plant species could be safer for human consumption. Conversely, if IP acts as a buffer for mineral nutrients and toxic elements then those cultivars may be rich in nutrients, but may also cause toxicity. However, an ecotoxicological risk is also inevitable if IP rich macrophyte roots containing heavy metals are consumed by herbivores. In this review, we summarize the current understanding about the role of IP in metal and metalloid sequestration, uptake, and transport. Furthermore, we will address the role of root IP in Oryza sativa for arsenic (As) sequestration leading to lower grain As translocation, reducing the risk of human exposure. PMID:24925182

  6. Uptake of Three Antibiotics and an Antiepileptic Drug by Wheat Crops Spray Irrigated with Wastewater Treatment Plant Effluent.

    PubMed

    Franklin, Alison M; Williams, Clinton F; Andrews, Danielle M; Woodward, Emily E; Watson, John E

    2016-03-01

    With rising demands on water supplies necessitating water reuse, wastewater treatment plant (WWTP) effluent is often used to irrigate agricultural lands. Emerging contaminants, like pharmaceuticals and personal care products (PPCPs), are frequently found in effluent due to limited removal during WWTP processes. Concern has arisen about the environmental fate of PPCPs, especially regarding plant uptake. The aim of this study was to analyze uptake of sulfamethoxazole, trimethoprim, ofloxacin, and carbamazepine in wheat ( L.) plants that were spray-irrigated with WWTP effluent. Wheat was collected before and during harvest, and plants were divided into grain and straw. Subsamples were rinsed with methanol to remove compounds adhering to surfaces. All plant tissues underwent liquid-solid extraction, solid-phase extraction cleanup, and liquid chromatography-tandem mass spectrometry analysis. Residues of each compound were present on most plant surfaces. Ofloxacin was found throughout the plant, with higher concentrations in the straw (10.2 ± 7.05 ng g) and lower concentrations in the grain (2.28 ± 0.89 ng g). Trimethoprim was found only on grain or straw surfaces, whereas carbamazepine and sulfamethoxazole were concentrated within the grain (1.88 ± 2.11 and 0.64 ± 0.37 ng g, respectively). These findings demonstrate that PPCPs can be taken up into wheat plants and adhere to plant surfaces when WWTP effluent is spray-irrigated. The presence of PPCPs within and on the surfaces of plants used as food sources raises the question of potential health risks for humans and animals.

  7. Impact of defoliation intensities on plant biomass, nutrient uptake and arbuscular mycorrhizal symbiosis in Lotus tenuis growing in a saline-sodic soil.

    PubMed

    García, I; Mendoza, R

    2012-11-01

    The impact of different defoliation intensities on the ability of Lotus tenuis plants to regrowth, mobilise nutrients and to associate with native AM fungi and Rhizobium in a saline-sodic soil was investigated. After 70 days, plants were subjected to 0, 25, 50, 75 and 100% defoliation and shoot regrowth was assessed at the end of subsequent 35 days. Compared to non-defoliated plants, low or moderate defoliation up to 75% did not affect shoot regrowth. However, 100% treatment affected shoot regrowth and the clipped plants were not able to compensate the growth attained by non-defoliated plants. Root growth was more affected by defoliation than shoot growth. P and N concentrations in shoots and roots increased with increasing defoliation while Na(+) concentration in shoots of non-defoliated and moderately defoliated plants was similar. Non-defoliated and moderately defoliated plants prevented increases of Na(+) concentration in shoots through both reducing Na(+) uptake and Na(+) transport to shoots by accumulating Na(+) in roots. At high defoliation, the salinity tolerance mechanism is altered and Na(+) concentration in shoots was higher than in roots. Reduction in the photosynthetic capacity induced by defoliation neither changed the root length colonised by AM fungi nor arbuscular colonisation but decreased the vesicular colonisation. Spore density did not change, but hyphal density and Rhizobium nodules increased with defoliation. The strategy of the AM symbiont consists in investing most of the C resources to preferentially retain arbuscular colonisation as well as inoculum density in the soil. PMID:22512871

  8. Uptake of intact zinc-ethylenediaminetetraacetic acid from soil is dependent on plant species and complex concentration.

    PubMed

    Collins, Richard N; Merrington, Graham; McLaughlin, Mike J; Knudsen, Chris

    2002-09-01

    Pot experiments were conducted with barley (Hordeum vulgare L.), potato (Solanum tuberosum L.), Indian mustard (Brassicajuncea L.), and white lupin (Lupinus albus L.) to determine the nature of Zn mobilization, uptake, and root-shoot transport from a Zn-contaminated soil in the presence of increasing concentrations of ethylenediaminetetraacetic acid (EDTA; 0.0-3.4 mmole/kg soil). Increasing EDTA concentrations lead to a greater proportion of soil-solution Zn being detected as the ZnEDTA complex. However, a significant increase in the concentration of soil-solution Zn was only observed after the addition of 3.4 mmole EDTA/ kg soil. At this application rate, regardless of the plant species, 97 +/- 9% (+/- SD) of the increase in soil-solution Zn could be accounted for by chelation/desorption, and 89 +/- 9% of total Zn in solution was measured as ZnEDTA. Although the complex was detected in the xylem exudate of B. juncea after 0.34 mmole EDTA/kg soil had been added, ZnEDTA was only found in the xylem exudate of the other plant species following the highest application rate of EDTA. In this case, the accumulation of Zn and the concentration of ZnEDTA in the xylem sap of B. juncea were significantly greater than those of H. vulgare and S. tuberosum. Measurements of plant transpiration following the addition of EDTA indicated that B. juncea experienced greater physiological stress in the presence of high concentrations of EDTA. It was therefore concluded that two different mechanisms of ZnEDTA uptake existed for these plant species. Based on a review of the literature, it was hypothesized that uptake of ZnEDTA by B. juncea occurred only after physiological damage to its root system, whereas uptake by H. vulgare and S. tuberosum was via an apoplastic pathway (passive extracellular transport into the xylem).

  9. Nitrogen uptake in riparian plant communities across a sharp ecological boundary of salmon density

    PubMed Central

    Mathewson, DD; Hocking, MD; Reimchen, TE

    2003-01-01

    Background Recent studies of anadromous salmon (Oncorhynchus spp.) on the Pacific Coast of North America indicate an important and previously unrecognized role of salmonid nutrients to terrestrial biota. However, the extent of this uptake by primary producers and consumers and the influences on community structure remain poorly described. We examine here the contribution of salmon nutrients to multiple taxa of riparian vegetation (Blechnum spicant, Menziesii ferruginea, Oplopanax horridus, Rubus spectabilis, Vaccinium alaskaense, V. parvifolium, Tsuga heterophylla) and measure foliar δ15N, total %N and plant community structure at two geographically separated watersheds in coastal British Columbia. To reduce potentially confounding effects of precipitation, substrate and other abiotic variables, we made comparisons across a sharp ecological boundary of salmon density that resulted from a waterfall barrier to salmon migration. Results δ15N and %N in foliage, and %cover of soil nitrogen indicators differed across the waterfall barrier to salmon at each watershed. δ15N values were enriched by 1.4‰ to 9.0‰ below the falls depending on species and watershed, providing a relative contribution of marine-derived nitrogen (MDN) to vegetation of 10% to 60%. %N in foliar tissues was slightly higher below the falls, with the majority of variance occurring between vegetation species. Community structure also differed with higher incidence of nitrogen-rich soil indicator species below the waterfalls. Conclusions Measures of δ15N, %N and vegetation cover indicate a consistent difference in the riparian community across a sharp ecological boundary of salmon density. The additional N source that salmon provide to nitrogen-limited habitats appears to have significant impacts on the N budget of riparian vegetation, which may increase primary productivity, and result in community shifts between sites with and without salmon access. This, in turn, may have cascading ecosystem

  10. Earlier growing seasons and changes in migration timing influence carbon uptake and plant production in Arctic coastal wetlands

    NASA Astrophysics Data System (ADS)

    Leffler, A. J.; Beard, K. H.; Kelsey, K.; Choi, R. T.; Welker, J. M.

    2015-12-01

    The wetlands of the Yukon-Kuskokwim Delta in western Alaska are important breeding areas for geese and are experiencing rapid climate change, specifically earlier onset of the growing season. Consequently, geese arrive 'later' in the growing season than in the past, potentially setting up a phenological mismatch with consequences for their nutrition, plant growth, and C and N processes in the ecosystem. We examined the interactive effects between the start of the growing season and Black Brant arrival time on these processes in a manipulative experiment. Advancing the growing season had a modest influence on CO2 exchange and plant growth. An early growing season shifted the rate of net ecosystem exchange (NEE) by 1-1.5 µmol m-2 s-1 toward a carbon (C) source. This change was driven by an increase in the rate of ecosystem respiration (ER). The advanced growing season nearly doubled the rate of leaf elongation in the early summer and this difference persisted as taller vegetation later in the year; belowground biomass was not affected. Timing of grazing had greater influence on CO2 exchange and plant growth. Grazing early in the season shifted the system to a carbon source by ca. 2 μmol m-2 s-1 while delaying grazing enhanced the carbon sink by 1 μmol m-2 s-1. Here, the influence was not through ER, but through reducing and enhancing standing leaf area, respectively. Early grazing also reduced season-long root production by over 50% while delayed grazing enhanced root production by 30%. Although delaying grazing enhanced C uptake and promoted plant growth in this ecosystem, leaf tissue in delayed-grazing plots had C:N of 16.7 compared to 14.2 in the typical-grazing plots, potentially reducing the digestibility of goose forage and slowing rates of decomposition. Biotic forcing in arctic tundra can thus be major drivers of ecosystem function and need to be considered as tundra system respond to changing conditions.

  11. Application of biosolids in mineral sands mine rehabilitation: use of stockpiled topsoil decreases trace element uptake by plants.

    PubMed

    Rate, Andrew W; Lee, Karen M; French, Peter A

    2004-02-01

    Mineral sands mining involves stripping topsoil to access heavy-mineral bearing deposits, which are then rehabilitated to their original state, commonly pasture in south-west Western Australia. Organic amendments such as biosolids (digested sewage sludge) can contribute organic carbon to the rehabilitating system and improve soil chemical fertility and physical conditions. Use of biosolids also introduces the risk of contamination of the soil-plant system with heavy metals, but may be a useful source of trace elements to plants if the concentrations of these elements are low in unamended soil. We expected that biosolids amendment of areas mined for mineral sands would result in increased concentrations of metals in soils and plants, and that metal uptake would be decreased by adding stockpiled topsoil or by liming. A glasshouse experiment growing a mixed annual ryegrass (Lolium rigidum)-subterranean clover (Trifolium subterraneum) sward was conducted using two soil materials (residue sand/clay and conserved topsoil) from a mineral sands mine amended with different rates of biosolids (0, 10, 20, 50 dry t/ha), and including a liming treatment (2 t/ha). Total concentrations of metals (As, Cd, Co, Cr, Cu, Ni, Pb and Zn) in soil increased with increasing rate of biosolids application. Metal uptake was generally lower where topsoil was present and was decreased by liming. With increasing biosolids application, plant metal concentrations increased for Cd, Ni and Zn but decreased or were erratic for other elements. In clover, biosolids application removed the Zn deficiency observed where biosolids were not applied. Plant uptake of all elements increased with increasing biosolids application, suggesting dilution by increased plant biomass was responsible for erratic metal concentration results. Despite the observed increases in uptake of metals by plants, metal concentrations in both species were low and below food standard thresholds. It is unlikely that a single

  12. Yield, biomass, and uptake of crop plants irrigated with TNT and RDX contaminated water

    SciTech Connect

    Simini, M.; Checkai, R.T.

    1995-12-31

    Crops grown in site-collected soil were irrigated with water containing 2,4,6-trinitrotoluene (TNT) and cyclotrimethylenetrinitramine (RDX) to simulate field conditions at Cornhusker Army Ammunition Plant, Nebraska. Pots were watered in an environment-controlled greenhouse to field capacity throughout the life-cycle of the crop with 2, 20, and 100 ppb RDX; 2,100, and 800ppb TNT; 100ppb RDX + 800ppb TNT; or uncontaminated water. Yield and biomass of tomato fruit, bush bean fruit, corn stover, and soybean seeds were significantly (p = 0.05) less when irrigated with the RDX + TNT treatment compared to controls. Lettuce leaves and radish root yield and biomass were unaffected by treatment level. Soil loading of RDX and TNT in response to evapotranspiration was greatest for tomato, corn, soybean, bush bean, and least for radish and lettuce. Plant tissue contaminant concentrations will be presented and discussed.

  13. Cyclic variations in nitrogen uptake rate of soybean plants: effects of pH and mixed nitrogen sources

    NASA Technical Reports Server (NTRS)

    Raper, C. D. Jr; Vessey, J. K.; Henry, L. T.; Chaillou, S.

    1991-01-01

    To determine if the daily pattern of NO3- and NH4+ uptake is affected by acidity or NO3- : NH4+ ratio of the nutrient solution, non-nodulated soybean plants (Glycine max) were exposed for 21 days to replenished, complete nutrient solutions at pH 6.0, 5.5, 5.0, and 4.5 which contained either 1.0 mM NH4+, 1.0 mM NO3- [correction of NO3+], 0.67 mM NH4+ plus 0.33 mM NO3- (2:1 NH4+ : NO3-) [correction of (2:1 NH3+ : NO4-)], or 0.33 mM NH4+ plus 0.67 mM NO3- (1:2 NH4+ : NO3-). Net uptake rates of NH4+ and NO3- were measured daily by ion chromatography as depletion from the replenished solutions. When NH4+ and NO3- were supplied together, cumulative uptake of total nitrogen was not affected by pH or solution NH4+ : NO3- ratio. The cumulative proportion of nitrogen absorbed as NH4+ decreased with increasing acidity; however, the proportional uptake of NH4+ and NO3- was not constant, but varied day-to-day. This day-to-day variation in relative proportions of NH4+ and NO3- absorbed when NH4+ : NO3- ratio and pH of solution were constant indicates that the regulatory mechanism is not directly competitive. Regardless of the effect of pH on cumulative uptake of NH4+, the specific nitrogen uptake rates from mixed and from individual NH4+ and NO3- sources oscillated between maxima and minima at each pH with average periodicities similar to the expected interval of leaf emergence.

  14. Influence of soil-extractable aluminium and pH on the uptake of aluminium from soil into the soybean plant (Glycine max).

    PubMed

    Dong, D; Thornton, I; Ramsey, M H

    1993-09-01

    The effects of soil pH and other soil properties on the uptake of AI by soybean plants have been investigated in a greenhouse experiment. Six soils were compared that were developed over six contrasting bedrock types ranging widely in their AI content and other chemical and physical characteristics, namely Oxford Clay, Chalk, Lower Lias Clay, Devonian Shale, Granite and Lower Greensand. Soil pH varied naturally between soil types and each soil was also amended to give two other pH levels using elemental sulphur and/or calcium carbonate. AI concentrations in various parts of the soybean plants were determined by ICP-AES after acid digestion. The AI solubility in the soils and hence its availability to the plants was estimated using a number of different reagents designed to extract different forms of AI.The AI concentration measured in the soybean leaves was found to be predicted most accurately by the 'available' AI extracted from soils by 0.02 M CaCl2. The relationship appears to the linear, with a correlation coefficient of 0.97 (p <0.01). The AI content of the leaves increases with decreasing soil pH. The relationship is non-linear with a marked increase in leaf AI for soils with pH <4.4. The amounts of 'plant-available' AI in the soils extracted with 0.02 M CaCl2 was much less than that extracted with 0.05 M EDTA, although both increased markedly with decreasing soil pH. The amount of AI measured in the soybean plants was directly related to both the 'available' forms of AI in the soils, and also to the pH of the soils. Soil pH was identified as a major factor that controls the uptake of Al from soil into the soybean plant.

  15. Uptake by cucurbitaceae of soil-Bome contaminants depends upon plant genotype and pollutant properties.

    PubMed

    Mattina, Maryjane Incorvia; Isleyen, Mehmet; Eitzer, Brian D; Iannucci-Berger, William; White, Jason C

    2006-03-15

    Three Cucurbitaceae, Cucurbita pepo L. subsp. pepo (cv. Black Beauty, true zucchini), Cucurbita pepo L. intersubspecific cross (cv. Zephyr, summer squash), and Cucumis sativis (cv. Marketmore, cucumber), were grown in rhizotrons containing soil contaminated with three classes of highly weathered, hydrophobic organic contaminants: (1) technical chlordane, (2) dichlorodiphenylethanes (DDT and DDD) and -ethene (DDE), (3) polyaromatic hydrocarbons (PAHs), and heavy metal residues. Movement of the contaminants through the soil/plant system was studied by comparing contaminant concentration in the bulk soil, the rhizosphere soil pore water, the xylem sap, and aerial tissue. This permitted, for the first time, calculation of bioconcentration factors (BCFs) based on concentration in the xylem sap versus that in the rhizosphere soil pore water. The bioconcentration factors so determined for the sum of five chlordane residues (two enantiomers of trans-chlordane, TC; two enantiomers of cis-chlordane, CC; and achiral trans-nonachlor, TN) were 36, 40, and 23 for Black Beauty, Zephyr, and Marketmore, respectively. In addition, the xylem sap of each cultivar had a consistent enantioselective profile for some of the chiral chlordane components. For the sum of dichlorodiphenylethanes and -ethene, comparable BCF values were 19, 4, and 0.8, respectively. In the case of PAHs, different BCF patterns among the cultivars were noted for three- versus four-ring compounds. Similarly, movement of heavy metals was cultivar-dependent, with cadmium BCF values 9.5, 3.5, and 0.6for Black Beauty, Zephyr, and Marketmore, respectively; the analogous BCFs for zinc were 9, 11, and 2. Thus, passage from ex planta to in planta regions of the soil/plant system is dependent not only on properties of the plant, but also on those of the pollutant. Such data will provide insight into transport mechanisms of highly hydrophobic organic contaminants, as well as heavy metal contaminants, in the soil/plant system.

  16. Effects of Amendments on Growth and Uptake of Cd and Zn by Wetland Plants, Typha angustifolia and Colocasia esculenta from Contaminated Sediments.

    PubMed

    Chayapan, P; Kruatrachue, M; Meetam, M; Pokethitiyook, P

    2015-01-01

    A pot study was conducted to compare the effects of amendments (CaHPO4 and cow manure) on growth and uptake of Cd and Zn from contaminated sediments by two wetland plant species, Typha angustifolia and Colocasia esculenta. Contaminated sediments (Cd 33.2 mg kg(-1) and Zn 363 mg kg(-1)) were collected from Mae Tao basin, Mae Sot district, Tak province, Thailand. The experiment consisted of 4 treatments: control (uncontaminated sediment), Cd/Zn, Cd/Zn + 5% CaHPO4, and Cd/Zn + 10% cow manure. Plants were grown for 3 months in the greenhouse. The addition of CaHPO4 resulted in the highest relative growth rate (RGR) and highest Cd accumulation in both T. angustifolia and C. esculenta while the lowest RGR was found in C. esculenta grown in the cow manure treatment. Both plant species had higher concentrations of metals (Cd, Zn) in their belowground parts. None of the amendments affected Zn accumulation. C. esculenta exhibited the highest uptake of both Cd and Zn. The results clearly demonstrated the phytoremediation potential of C. esculenta and the enhancement of this potential by CaHPO4 amendment.

  17. Effects of Amendments on Growth and Uptake of Cd and Zn by Wetland Plants, Typha angustifolia and Colocasia esculenta from Contaminated Sediments.

    PubMed

    Chayapan, P; Kruatrachue, M; Meetam, M; Pokethitiyook, P

    2015-01-01

    A pot study was conducted to compare the effects of amendments (CaHPO4 and cow manure) on growth and uptake of Cd and Zn from contaminated sediments by two wetland plant species, Typha angustifolia and Colocasia esculenta. Contaminated sediments (Cd 33.2 mg kg(-1) and Zn 363 mg kg(-1)) were collected from Mae Tao basin, Mae Sot district, Tak province, Thailand. The experiment consisted of 4 treatments: control (uncontaminated sediment), Cd/Zn, Cd/Zn + 5% CaHPO4, and Cd/Zn + 10% cow manure. Plants were grown for 3 months in the greenhouse. The addition of CaHPO4 resulted in the highest relative growth rate (RGR) and highest Cd accumulation in both T. angustifolia and C. esculenta while the lowest RGR was found in C. esculenta grown in the cow manure treatment. Both plant species had higher concentrations of metals (Cd, Zn) in their belowground parts. None of the amendments affected Zn accumulation. C. esculenta exhibited the highest uptake of both Cd and Zn. The results clearly demonstrated the phytoremediation potential of C. esculenta and the enhancement of this potential by CaHPO4 amendment. PMID:25831275

  18. Prospects for optimizing soil microbial functioning to improve plant nutrient uptake and soil carbon sequestration under elevated CO2

    NASA Astrophysics Data System (ADS)

    Nie, M.; Pendall, E. G.

    2013-12-01

    Potential to mitigate climate change through increasing plant productivity and its carbon (C) input to soil may be limited by soil nitrogen (N) availability. Using a novel 13C-CO2 and 15N-soil dual labeling method, we investigated whether plant growth-promoting bacteria would interact with atmospheric CO2 concentration to alter plant productivity and soil C storage. We grew Bouteloua gracilis under ambient (380 ppm) or elevated CO2 (700 ppm) in climate-controlled chambers, and plant individuals were grown with or without Pseudomonas fluorescens inoculum, which can produce N catabolic enzymes. We observed that both eCO2 and P. fluorescens increased plant productivity and its C allocation to soil. P. fluorescens relative to eCO2 enhanced plant N uptake from soil organic matter, which highly correlated with soil N enzyme activities and rhizosphere exudate C. More importantly, P. fluorescens increased microbial biomass and deceased specific microbial respiration in comparison with eCO2. These results indicate that application of plant growth-promoting bacteria can increase microbial C utilization efficiency with subsequent N mineralization from soil organic matter, and may improve plant N availability and soil C sequestration. Together, our findings highlight the potential of plant growth-promoting bacteria for global change mitigation by terrestrial ecosystems.

  19. Using magnetic and chemical measurements to detect atmospherically-derived metal pollution in artificial soils and metal uptake in plants.

    PubMed

    Sapkota, B; Cioppa, M T

    2012-11-01

    Quantification of potential effects of ambient atmospheric pollution on magnetic and chemical properties of soils and plants requires precise experimental studies. A controlled growth experiment assessing magnetic and chemical parameters was conducted within (controls) and outside (exposed) a greenhouse setting. Magnetic susceptibility (MS) measurements showed that while initial MS values were similar for the sample sets, the overall MS value of exposed soil was significantly greater than in controls, suggesting an additional input of Fe-containing particles. Scanning electron microscope images of the exposed soils revealed numerous angular magnetic particles and magnetic spherules typical of vehicular exhaust and combustion processes, respectively. Similarly, chemical analysis of plant roots showed that plants grown in the exposed soil had higher concentrations of Fe and heavy (toxic) metals than controls. This evidence suggests that atmospheric deposition contributed to the MS increase in exposed soils and increased metal uptake by plants grown in this soil.

  20. Exemplifying whole-plant ozone uptake in adult forest trees of contrasting species and site conditions.

    PubMed

    Nunn, Angela J; Wieser, Gerhard; Metzger, Ursula; Löw, Markus; Wipfler, Philip; Häberle, Karl-Heinz; Matyssek, Rainer

    2007-04-01

    Whole-tree O3 uptake was exemplified for Picea abies, Fagus sylvatica and Larix decidua in stands at high and low altitude and contrasting water availability through sap flow measurement in tree trunks, intrinsically accounting for drought and boundary layer effects on O3 flux. O3 uptake of evergreen spruce per unit foliage area was enhanced by 100% at high relative to low elevation, whereas deciduous beech and larch showed similar uptake regardless of altitude. The responsiveness of the canopy conductance to water vapor and, as a consequence, O3 uptake to soil moisture and air humidity did not differ between species. Unifying findings at the whole-tree level will promote cause-effect based O3 risk assessment and modeling. PMID:16996178

  1. Exemplifying whole-plant ozone uptake in adult forest trees of contrasting species and site conditions.

    PubMed

    Nunn, Angela J; Wieser, Gerhard; Metzger, Ursula; Löw, Markus; Wipfler, Philip; Häberle, Karl-Heinz; Matyssek, Rainer

    2007-04-01

    Whole-tree O3 uptake was exemplified for Picea abies, Fagus sylvatica and Larix decidua in stands at high and low altitude and contrasting water availability through sap flow measurement in tree trunks, intrinsically accounting for drought and boundary layer effects on O3 flux. O3 uptake of evergreen spruce per unit foliage area was enhanced by 100% at high relative to low elevation, whereas deciduous beech and larch showed similar uptake regardless of altitude. The responsiveness of the canopy conductance to water vapor and, as a consequence, O3 uptake to soil moisture and air humidity did not differ between species. Unifying findings at the whole-tree level will promote cause-effect based O3 risk assessment and modeling.

  2. Phosphate Treatment of Lead-Contaminated Soil: Effects on Water Quality, Plant Uptake, and Lead Speciation.

    PubMed

    Weber, John S; Goyne, Keith W; Luxton, Todd P; Thompson, Allen L

    2015-07-01

    Water quality threats associated with using phosphate-based amendments to remediate Pb-contaminated soils are a concern, particularly in riparian areas. This study investigated the effects of P application rates to a Pb-contaminated alluvial soil on Pb and P loss via surface water runoff, Pb accumulation in tall fescue ( Schreb; Kentucky 31), and Pb speciation. An alluvial soil was treated with triple superphosphate at P to Pb molar ratios of 0:1 (control), 4:1, 8:1, and 16:1. After a 6-mo reaction period, rainfall simulation (RFS) studies were conducted, followed by tall fescue establishment and a second set of RFS studies (1 yr after treatment). Results from the first RFS study (unvegetated) demonstrated that the total Pb and P concentrations in the effluents of 8:1 and 16:1 (P:Pb molar ratio) treatment levels were significantly greater ( < 0.05) than the control. One year after P treatment and 6 mo after vegetation establishment, total P and Pb concentrations of the effluents from a second RFS decreased by one to three orders of magnitude. Total and dissolved P concentration in runoff from the 16:1 P:Pb treatment remained significantly greater than all other treatments. However, total Pb concentration in the runoff was comparable among the treatments. Phosphorus treatment also reduced Pb uptake into tall fescue by >55%. X-ray absorption near-edge structure spectroscopy data showed that pyromorphite [Pb(PO)OH,Cl,F] abundance ranged from 0% (control) to 32% (16:1 P:Pb; 1 yr after treatment) of the total soil Pb. Although P treatment stimulated pyromorphite formation, pyromorphite abundance was comparable between the P-treated soils. These findings suggest that a 4:1 (P:Pb molar ratio) P treatment may be a sufficient means of reducing Pb bioavailability while minimizing concerns related to P loss in an alluvial setting. PMID:26437094

  3. Phosphate Treatment of Lead-Contaminated Soil: Effects on Water Quality, Plant Uptake, and Lead Speciation.

    PubMed

    Weber, John S; Goyne, Keith W; Luxton, Todd P; Thompson, Allen L

    2015-07-01

    Water quality threats associated with using phosphate-based amendments to remediate Pb-contaminated soils are a concern, particularly in riparian areas. This study investigated the effects of P application rates to a Pb-contaminated alluvial soil on Pb and P loss via surface water runoff, Pb accumulation in tall fescue ( Schreb; Kentucky 31), and Pb speciation. An alluvial soil was treated with triple superphosphate at P to Pb molar ratios of 0:1 (control), 4:1, 8:1, and 16:1. After a 6-mo reaction period, rainfall simulation (RFS) studies were conducted, followed by tall fescue establishment and a second set of RFS studies (1 yr after treatment). Results from the first RFS study (unvegetated) demonstrated that the total Pb and P concentrations in the effluents of 8:1 and 16:1 (P:Pb molar ratio) treatment levels were significantly greater ( < 0.05) than the control. One year after P treatment and 6 mo after vegetation establishment, total P and Pb concentrations of the effluents from a second RFS decreased by one to three orders of magnitude. Total and dissolved P concentration in runoff from the 16:1 P:Pb treatment remained significantly greater than all other treatments. However, total Pb concentration in the runoff was comparable among the treatments. Phosphorus treatment also reduced Pb uptake into tall fescue by >55%. X-ray absorption near-edge structure spectroscopy data showed that pyromorphite [Pb(PO)OH,Cl,F] abundance ranged from 0% (control) to 32% (16:1 P:Pb; 1 yr after treatment) of the total soil Pb. Although P treatment stimulated pyromorphite formation, pyromorphite abundance was comparable between the P-treated soils. These findings suggest that a 4:1 (P:Pb molar ratio) P treatment may be a sufficient means of reducing Pb bioavailability while minimizing concerns related to P loss in an alluvial setting.

  4. Synergistic Effects of Plant Growth Promoting Rhizobacteria and Chitosan on In Vitro Seeds Germination, Greenhouse Growth, and Nutrient Uptake of Maize (Zea mays L.)

    PubMed Central

    Agbodjato, Nadège A.; Noumavo, Pacôme A.; Adjanohoun, Adolphe; Agbessi, Léonce; Baba-Moussa, Lamine

    2016-01-01

    This study aimed to assess the effects of three plant growth promoting rhizobacteria (PGPR) and chitosan either singly or in combination on maize seeds germination and growth and nutrient uptake. Maize seeds were treated with chitosan and bacterial solution. The germination and growth tests were carried out in square Petri dishes and plastic pots. The combination chitosan-A. lipoferum-P. fluorescens has increased the seeds vigor index up to 36.44% compared to the control. In comparison to the control, P. putida has significantly improved root weight (44.84%) and germinated seed weight (31.39%) whereas chitosan-P. putida has increased the shoot weight (65.67%). For the growth test, the maximal heights (17.66%) were obtained by plants treated with the combination A. lipoferum-P. fluorescens-P. putida. Chitosan-P. fluorescens induced the highest increases of leaves per plant (50.09%), aerial (84.66%), and underground biomass (108.77%) production. The plants inoculated with A. lipoferum had the large leaf areas with an increase of 54.08%, while combinations P. fluorescens-P. putida and chitosan-A. lipoferum improved the aerial and underground dry matter of plants to 26.35% and 18.18%. The nitrogen content of the plants was increased by chitosan-A. lipoferum-P. fluorescens-P. putida with an increasing of 41.61%. The combination of chitosan and PGPR can be used as biological fertilizers to increase maize production. PMID:26904295

  5. Genome-wide Comparative Analysis of Annexin Superfamily in Plants

    PubMed Central

    Jami, Sravan Kumar; Clark, Greg B.; Ayele, Belay T.; Ashe, Paula; Kirti, Pulugurtha Bharadwaja

    2012-01-01

    Most annexins are calcium-dependent, phospholipid-binding proteins with suggested functions in response to environmental stresses and signaling during plant growth and development. They have previously been identified and characterized in Arabidopsis and rice, and constitute a multigene family in plants. In this study, we performed a comparative analysis of annexin gene families in the sequenced genomes of Viridiplantae ranging from unicellular green algae to multicellular plants, and identified 149 genes. Phylogenetic studies of these deduced annexins classified them into nine different arbitrary groups. The occurrence and distribution of bona fide type II calcium binding sites within the four annexin domains were found to be different in each of these groups. Analysis of chromosomal distribution of annexin genes in rice, Arabidopsis and poplar revealed their localization on various chromosomes with some members also found on duplicated chromosomal segments leading to gene family expansion. Analysis of gene structure suggests sequential or differential loss of introns during the evolution of land plant annexin genes. Intron positions and phases are well conserved in annexin genes from representative genomes ranging from Physcomitrella to higher plants. The occurrence of alternative motifs such as K/R/HGD was found to be overlapping or at the mutated regions of the type II calcium binding sites indicating potential functional divergence in certain plant annexins. This study provides a basis for further functional analysis and characterization of annexin multigene families in the plant lineage. PMID:23133603

  6. Computational methods for comparative analysis of plant small RNAs.

    PubMed

    Mahalingam, Gayathri; Meyers, Blake C

    2010-01-01

    Small RNAs play an important role in plant development, stress responses, and epigenetic regulation, primarily through their role in transcriptional and post-transcriptional silencing of specific target genes and loci. Most if not all plants utilize these small RNA signaling networks. We have developed a deep-sequencing based dataset of plant small RNAs, based on the hypothesis that comparisons among the complex pool of small RNAs from diverse plants will identify novel types of conserved, regulated, or species-specific molecules. A database containing upward of hundreds of millions of plant small RNA sequences is being created for comparative analyses. This small RNA database will allow the experimental characterization of the majority of the biologically important small RNAs for a range of plant species. This database can be accessed from our website (http://smallrna.udel.edu/). A variety of web-based tools have been developed for analyses of these data. Here, we focus on these tools, and we describe how the users can implement these tools to analyze and interpret the small RNA data and how the users could use similar approaches for other sets of plant small RNAs from diverse species.

  7. Silicate mineral impacts on the uptake and storage of arsenic and plant nutrients in rice ( Oryza sativa L.).

    PubMed

    Seyfferth, Angelia L; Fendorf, Scott

    2012-12-18

    Arsenic-contaminated rice grain may threaten human health globally. Since H₃AsO₃⁰ is the predominant As species found in paddy pore-waters, and H₄SiO₄⁰ and H₃AsO₃⁰ share an uptake pathway, silica amendments have been proposed to decrease As uptake and consequent As concentrations in grains. Here, we evaluated the impact of two silicate mineral additions differing in solubility (+Si(L), diatomaceous earth, 0.29 mM Si; +Si(H), Si-gel, 1.1 mM Si) to soils differing in mineralogy on arsenic concentration in rice. The +Si(L) addition either did not change or decreased As concentration in pore-water but did not change or increased grain-As levels relative to the (+As--Si) control. The +Si(H) addition increased As in pore-water, but it significantly decreased grain-As relative to the (+As--Si) control. Only the +Si(H) addition resulted in significant increases in straw- and husk-Si. Total grain- and straw-As was negatively correlated with pore-water Si, and the relationship differed between two soils exhibiting different mineralogy. These differing results are a consequence of competition between H₄SiO₄⁰ and H₃AsO₃⁰ for adsorption sites on soil solids and subsequent plant-uptake, and illustrate the importance of Si mineralogy on arsenic uptake.

  8. Silicate mineral impacts on the uptake and storage of arsenic and plant nutrients in rice ( Oryza sativa L.).

    PubMed

    Seyfferth, Angelia L; Fendorf, Scott

    2012-12-18

    Arsenic-contaminated rice grain may threaten human health globally. Since H₃AsO₃⁰ is the predominant As species found in paddy pore-waters, and H₄SiO₄⁰ and H₃AsO₃⁰ share an uptake pathway, silica amendments have been proposed to decrease As uptake and consequent As concentrations in grains. Here, we evaluated the impact of two silicate mineral additions differing in solubility (+Si(L), diatomaceous earth, 0.29 mM Si; +Si(H), Si-gel, 1.1 mM Si) to soils differing in mineralogy on arsenic concentration in rice. The +Si(L) addition either did not change or decreased As concentration in pore-water but did not change or increased grain-As levels relative to the (+As--Si) control. The +Si(H) addition increased As in pore-water, but it significantly decreased grain-As relative to the (+As--Si) control. Only the +Si(H) addition resulted in significant increases in straw- and husk-Si. Total grain- and straw-As was negatively correlated with pore-water Si, and the relationship differed between two soils exhibiting different mineralogy. These differing results are a consequence of competition between H₄SiO₄⁰ and H₃AsO₃⁰ for adsorption sites on soil solids and subsequent plant-uptake, and illustrate the importance of Si mineralogy on arsenic uptake. PMID:23153302

  9. Increase in nitrate uptake by soybean plants during interruption of the dark period with low intensity light

    NASA Technical Reports Server (NTRS)

    Raper, C. D. Jr; Vessey, J. K.; Henry, L. T.

    1991-01-01

    Diurnal patterns of net NO3- uptake by nonnodulated soybean [Glycine max (L.) Merr. cv. Ransom] plants growing in flowing hydroponic culture at 26 and 16 degrees C root temperatures were measured at hourly intervals during alternate days of a 12-day growth period. Ion chromatography was used to determine removal of NO3- from the culture solution. Day and night periods of 9 and 15 h were used during growth. The night period included two 6-h dark periods and an intervening 3-h period of night interruption by incandescent lamps to effect a long-day photoperiod and repress floral initiation. At both root temperatures, the average specific rates of NO3- uptake were twice as great during the night interruption period as during the day period; they were greater during the day period than during the dark periods; and they were greater during the dark period immediately following the day period than during the later dark period that followed the night interruption. While these average patterns were repetitious among days, measured rates of uptake varied hourly and included intervals of net efflux scattered through the day period and more frequently through the 2 dark periods. Root temperature did not affect the average daily specific rates of uptake or the qualitative relationships among day, dark and night interruption periods of the diurnal cycle.

  10. Fate of polyfluoroalkyl phosphate diesters and their metabolites in biosolids-applied soil: biodegradation and plant uptake in greenhouse and field experiments.

    PubMed

    Lee, Holly; Tevlin, Alex G; Mabury, Scotia A; Mabury, Scott A

    2014-01-01

    Significant contamination of perfluoroalkyl acids (PFAAs) in wastewater treatment plant (WWTP) sludge implicates the practice of applying treated sludge or biosolids as a potential source of these chemicals onto agricultural farmlands. Recent efforts to characterize the sources of PFAAs in the environment have unveiled a number of fluorotelomer-based materials that are capable of degrading to the perfluoroalkyl carboxylates (PFCAs), such as the polyfluoroalkyl phosphate diesters (diPAPs), which have been detected in WWTP and paper fiber biosolids. Here, a greenhouse microcosm was used to investigate the fate of endogenous diPAPs and PFCAs present in WWTP and paper fiber biosolids upon amendment of these materials with soil that had been sown with Medicago truncatula plants. Biodegradation pathways and plant uptake were further elucidated in a separate greenhouse microcosm supplemented with high concentrations of 6:2 diPAP. Biosolid-amended soil exhibited increased concentrations of diPAPs (4-83 ng/g dry weight (dw)) and PFCAs (0.1-19 ng/g dw), as compared to control soils (nd-1.4 ng/g dw). Both plant uptake and biotransformation contributed to the observed decline in diPAP soil concentrations over time. Biotransformation was further evidenced by the degradation of 6:2 diPAP to its corresponding fluorotelomer intermediates and C4-C7 PFCAs. Substantial plant accumulation of endogenous PFCAs present in the biosolids (0.1-138 ng/g wet weight (ww)) and those produced from 6:2 diPAP degradation (100-58 000 ng/g ww) were observed within 1.5 months of application, with the congener profile dominated by the short-chain PFCAs (C4-C6). This pattern was corroborated by the inverse relationship observed between the plant-soil accumulation factor (PSAF, Cplant/Csoil) and carbon chain length (p < 0.05, r = 0.90-0.97). These results were complemented by a field study in which the fate of diPAPs and PFCAs was investigated upon application of compost and paper fiber biosolids to

  11. [Effect of Cr(VI) stress on growth of three herbaceous plants and their Cr uptake].

    PubMed

    Wang, Ai-Yun; Huang, Shan-Shan; Zhong, Guo-Feng; Xu, Gang-Biao; Liu, Zhi-Xiang; Shen, Xiang-Bao

    2012-06-01

    In order to elucidate the toxic mechanisms of Trifolium repens, Festuca arundinacea and Medicago sativa under chromium [Cr (VI)] stress, provide a theoretic foundation for phytoremediation of Cr-contaminated soil, pot experiment was conducted to investigate the effects of Cr(VI) on plant growth, physiological characteristics, Cr accumulation and distribution in three herbaceous plants. Soil sample was treated by adding K2Cr2O7 with the Cr(VI) concentration of 0, 100, 200, 300 and 400 mg x kg(-1), respectively. The results indicated that the average tolerance indices of T. repens, F. arundinacea and M. sativa were 62.5, 48.3 and 36.33, respectively. Compared with control group, contents of chlorophyll, the activity of superoxide dismutase(SOD) and peroxidase (POD) were 57.14%, 51.51%, 35.76% and 63.27%, 52.96%, 41.36% in T. repens, and F. arundinacea, respectively, but M. sativa died in 400 mg x kg(-1) Cr(VI) treatment. The plant height, root length, dry mass of roots and shoots decreased under Cr(VI) stress in three herbaceous plants, and M. sativa > F. arundinacea > T. repens, however, the content of malonyldialdehyde (MDA) increased compared to the control, and the variation range of M. sativa was the highest, while T. repens was the smallest among them. The tolerance of Cr( VI) was T. repens > F. arundinacea > M. sativa. Cr mainly distributed in cell wall and then in the cytoplasm, and less distributed in the mitochondrion and chloroplast in leaves of three herbaceous plants, whereas the content of chlorophyll, MDA, the activity of SOD and POD correlated well with Cr accumulation in the mitochondrion and chloroplast. Cr concentration in the subcellular of leaves increased with the adding Cr(VI) concentration,and M. sativa > F. arundinacea > T. repens. In comparison with T. repens, F. arundinacea, Cr concentration in the leaves of M. sativa was the maximal, i.e. 51.44 mg x kg(-1), and the proportions in the mitochondrion (18.04%) and chloroplast (19.09%) were

  12. Uptake and Bioaccumulation of Pentachlorophenol by Emergent Wetland Plant Phragmites australis (Common Reed) in Cadmium Co-contaminated Soil.

    PubMed

    Hechmi, Nejla; Ben Aissa, Nadhira; Abdenaceur, Hassen; Jedidi, Naceur

    2015-01-01

    Despite many studies on phytoremediation of soils contaminated with either heavy metals or organics, little information is available on the effectiveness of phytoremediation of co-occurring metal and organic pollutants especially by using wetland species. Phragmites australis is a common wetland plant and its potential for phytoremediation of cadmium pentachlorophenol (Cd-PCP) co-contaminated soil was investigated. A greenhouse study was executed to elucidate the effects of Cd (0, 10, and 20 mg kg(-1)) without or with PCP (0, 50, and 250 mg kg(-1)) on the growth of the wetland plant P. australis and its uptake, accumulation and removal of pollutant from soils. After 75 days, plant biomass was significantly influenced by interaction of Cd and PCP and the effect of Cd on plant growth being stronger than that of PCP. Coexistence of PCP at low level lessened Cd toxicity to plants, resulting in improved plant growth and increased Cd accumulation in plant tissues. The dissipation of PCP in soils was significantly influenced by interactions of Cd, PCP and plant presence or absence. As an evaluation of soil biological activities after remediation soil enzyme was measured.

  13. Plant growth and cation composition of two cultivars of spring wheat (Triticum aestivum L.) differing in P uptake efficiency.

    PubMed

    Zhu, Y G; Smith, S E; Smith, F A

    2001-06-01

    Phosphorus (P)-zinc (Zn) interactions were investigated in two wheat cultivars (Brookton versus Krichauff) differing in P uptake efficiency. The experiment was done in a growth chamber. Rock phosphate (RP) or CaHPO4 (CaP) were used as P sources, and ammonium nitrate (AN) or nitrate only (NO) were used as nitrogen sources. Two Zn levels were used, 0.22 mg x kg(-1) (LZ) and 2.2 mg ZnSO4.7H2O x kg(-1) (HZ), respectively. P availability significantly affected plant biomass production, but Zn supply had little effect. Plants fed ammonium nitrate had significantly lower concentrations of cations than those fed nitrate only. Cultivar Brookton (with higher P uptake efficiency) consistently had lower concentrations of cations than cv. Krichauff (with low P uptake efficiency) under limited P supply. The differences in concentrations of cations increased with the decrease in P availability, but were not affected by Zn supply. The ratio of potassium in roots to shoots of cultivar Brookton was always higher than in cultivar Krichauff. Based on these findings, it is postulated that the lower concentrations of cations in cultivar Brookton are related to root exudation of organic anions, and a conceptual model is established to describe the regulation of root exudation of organic anions and concentrations of cations.

  14. Arsenic uptake, arsenite efflux and plant growth in hyperaccumulator Pteris vittata: Role of arsenic-resistant bacteria.

    PubMed

    Han, Yong-He; Fu, Jing-Wei; Chen, Yanshan; Rathinasabapathi, Bala; Ma, Lena Q

    2016-02-01

    Bacteria-mediated arsenic (As) transformation and their impacts on As and P uptake and plant growth in As-hyperaccumulator Pteris vittata (PV) were investigated under sterile condition. All As-resistant bacteria (9 endophytic and 6 rhizospheric) were As-reducers except one As-oxidizer. After growing two months in media with 37.5 mg kg(-1) AsV, As concentrations in the fronds and roots were 3655-5389 (89-91% AsIII) and 971-1467 mg kg(-1) (41-73% AsIII), corresponding to 22-52% decrease in the As in the media. Bacterial inoculation enhanced As and P uptake by up to 47 and 69%, and PV growth by 20-74%, which may be related to elevated As and P in plants (r = 0.88-0.97, p < 0.05). Though AsV was supplied, 95% of the As in the bacteria-free media was AsIII, suggesting efficient efflux of AsIII by PV roots (120 µg g(-1) root fw). This was supported by the fact that no AsV was detected in media inoculated with As-reducers while 95% of AsV was detected with As-oxidizer. Our data showed that, under As-stress, PV reduced As toxicity by efficient AsIII efflux into media and AsIII translocation to the fronds, and bacteria benefited PV growth probably via enhanced As and P uptake.

  15. Identification of a novel pathway involving a GATA transcription factor in yeast and possibly in plant Zn uptake and homeostasis.

    PubMed

    Milner, Matthew J; Pence, Nicole S; Liu, Jiping; Kochian, Leon V

    2014-03-01

    To gain a better understanding of the regulation of Zn homeostasis in plants and the degree of conservation of Zn homeostasis between plants and yeast, a cDNA library from the Zn/Cd hyperaccumulating plant species, Noccaea caerulescens, was screened for its ability to restore growth under Zn limiting conditions in the yeast mutant zap1Δ. ZAP1 is a transcription factor that activates the Zn dependent transcription of yeast genes involved in Zn uptake, including ZRT1, the yeast high affinity Zn transporter. From this screen two members of the E2F family of transcription factors were found to activate ZRT1 expression in a Zn independent manner. The activation of ZRT1 by the plant E2F proteins involves E2F-mediated activation of a yeast GATA transcription factor which in turn activates ZRT1 expression. A ZRT1 promoter region necessary for activation by E2F and GATA proteins is upstream of two zinc responsive elements previously shown to bind ZAP1 in ZRT1. This activation may not involve direct binding of E2F to the ZRT1 promoter. The expression of E2F genes in yeast does not replace function of ZAP1; instead it appears to activate a novel GATA regulatory pathway involved in Zn uptake and homeostasis that is not Zn responsive.

  16. Root controls on water redistribution and carbon uptake in the soil-plant system under current and future climate

    NASA Astrophysics Data System (ADS)

    Volpe, V.; Marani, M.; Albertson, J. D.; Katul, G.

    2013-10-01

    Understanding photosynthesis and plant water management as a coupled process remains an open scientific problem. Current eco-hydrologic models characteristically describe plant photosynthetic and hydraulic processes through ad hoc empirical parameterizations with no explicit accounting for the main pathways over which carbon and water uptake interact. Here, a soil-plant-atmosphere continuum model is proposed that mechanistically couples photosynthesis and transpiration rates, including the main leaf physiological controls exerted by stomata. The proposed approach links the soil-to-leaf hydraulic transport to stomatal regulation, and closes the coupled photosynthesis-transpiration problem by maximizing leaf carbon gain subject to a water loss constraint. The approach is evaluated against field data from a grass site and is shown to reproduce the main features of soil moisture dynamics and hydraulic redistribution. In particular, it is shown that the differential soil drying produced by diurnal root water uptake drives a significant upward redistribution of moisture both through a conventional Darcian flow and through the root system, consistent with observations. In a numerical soil drying experiment, it is demonstrated that more than 50% of diurnal transpiration is supplied by nocturnal upward water redistribution, and some 12% is provided directly through root hydraulic redistribution. For a prescribed leaf area density, the model is then used to diagnose how elevated atmospheric CO2 concentration and increased air temperature jointly impact soil moisture, transpiration, photosynthesis, and whole-plant water use efficiency, along with compensatory mechanisms such as hydraulic lift using several canonical forms of root-density distribution.

  17. Silicon cycle in rice paddy fields: insights provided by relations between silicon forms in topsoils and plant silicon uptake

    NASA Astrophysics Data System (ADS)

    Klotzbücher, Thimo; Marxen, Anika; Jahn, Reinhold; Vetterlein, Doris

    2016-04-01

    Silicon (Si) enhances the resistance of plants against abiotic and biotic stresses. The amounts of Si taken up by rice plants typically exceed those of major essential nutrients such as nitrogen and phosphorous. Silicon cycling in paddy fields is, however, still poorly studied. We examined relationships between Si forms in topsoil and plant Si uptake for 4 Vietnamese regions with low, and 3 Philippine regions with high Si availability (10 fields per region). Mean rice straw Si concentrations within regions ranged from 3.0 to 8.4%. For most of the Vietnamese fields they were lower than the critical value of 5.0%, suggesting a Si limitation of plant growth. For fields with low Si availability, straw Si concentrations were positively related to acetate-extractable Si in topsoil (i.e., dissolved and adsorbed Si), while such a relationship was not found for fields with high Si availability, where straw Si concentrations were on a similar level, suggesting a maximum Si uptake capacity was reached. Mean annual Si uptake by rice within regions ranged from 0.31 to 1.40 Mg Si ha-1 year-1, i.e., values that are much larger than published values for other ecosystems. They are determined by the continuous supply of plant-available Si during the cropping season, biomass production, and number of crops per year. Weatherable silicate minerals mainly cause spatial differences in supply of plant-available Si. Regional means of concentrations of carbonate-extractable Si (i.e., amorphous Si oxides) ranged from 2.2 to 16.7 g Si kg-1. Input of phytoliths (amorphous Si bodies in straw) is presumed to be an important factor for storage of carbonate-extractable Si in topsoil. Laboratory incubation experiments showed positive relationships between concentrations of carbonate-extractable Si and the release of dissolved Si from soil, suggesting amorphous Si oxides are among the most soluble Si-containing solids in soil. Estimates suggest that up to ~20% of Si taken up by plants might derive

  18. MIPS PlantsDB: a database framework for comparative plant genome research.

    PubMed

    Nussbaumer, Thomas; Martis, Mihaela M; Roessner, Stephan K; Pfeifer, Matthias; Bader, Kai C; Sharma, Sapna; Gundlach, Heidrun; Spannagl, Manuel

    2013-01-01

    The rapidly increasing amount of plant genome (sequence) data enables powerful comparative analyses and integrative approaches and also requires structured and comprehensive information resources. Databases are needed for both model and crop plant organisms and both intuitive search/browse views and comparative genomics tools should communicate the data to researchers and help them interpret it. MIPS PlantsDB (http://mips.helmholtz-muenchen.de/plant/genomes.jsp) was initially described in NAR in 2007 [Spannagl,M., Noubibou,O., Haase,D., Yang,L., Gundlach,H., Hindemitt, T., Klee,K., Haberer,G., Schoof,H. and Mayer,K.F. (2007) MIPSPlantsDB-plant database resource for integrative and comparative plant genome research. Nucleic Acids Res., 35, D834-D840] and was set up from the start to provide data and information resources for individual plant species as well as a framework for integrative and comparative plant genome research. PlantsDB comprises database instances for tomato, Medicago, Arabidopsis, Brachypodium, Sorghum, maize, rice, barley and wheat. Building up on that, state-of-the-art comparative genomics tools such as CrowsNest are integrated to visualize and investigate syntenic relationships between monocot genomes. Results from novel genome analysis strategies targeting the complex and repetitive genomes of triticeae species (wheat and barley) are provided and cross-linked with model species. The MIPS Repeat Element Database (mips-REdat) and Catalog (mips-REcat) as well as tight connections to other databases, e.g. via web services, are further important components of PlantsDB. PMID:23203886

  19. Muscle-tendon glucose uptake in Achilles tendon rupture and tendinopathy before and after eccentric rehabilitation: Comparative case reports.

    PubMed

    Masood, Tahir; Kalliokoski, Kari; Bojsen-Møller, Jens; Finni, Taija

    2016-09-01

    Achilles tendon rupture (ATR) is the most common tendon rupture injury. The consequences of ATR on metabolic activity of the Achilles tendon and ankle plantarflexors are unknown. Furthermore, the effects of eccentric rehabilitation on metabolic activity patterns of Achilles tendon and ankle plantarflexors in ATR patients have not been reported thus far. We present a case study demonstrating glucose uptake (GU) in the Achilles tendon, the triceps surae, and the flexor hallucis longus of a post-surgical ATR patient before and after a 5-month eccentric rehabilitation. At baseline, three months post-surgery, all muscles and Achilles tendon displayed much higher GU in the ATR patient compared to a healthy individual despite lower plantarflexion force. After the rehabilitation, plantarflexion force increased in the operated leg while muscle GU was considerably reduced. The triceps surae muscles showed similar values to the healthy control. When compared to the healthy or a matched patient with Achilles tendon pain after 12 weeks of rehabilitation, Achilles tendon GU levels of ATR patient remained greater after the rehabilitation. Past studies have shown a shift in the metabolic fuel utilization towards glycolysis due to immobilization. Further research, combined with immuno-histological investigation, is needed to fully understand the mechanism behind excessive glucose uptake in ATR cases. PMID:27428528

  20. PGSB PlantsDB: updates to the database framework for comparative plant genome research

    PubMed Central

    Spannagl, Manuel; Nussbaumer, Thomas; Bader, Kai C.; Martis, Mihaela M.; Seidel, Michael; Kugler, Karl G.; Gundlach, Heidrun; Mayer, Klaus F.X.

    2016-01-01

    PGSB (Plant Genome and Systems Biology: formerly MIPS) PlantsDB (http://pgsb.helmholtz-muenchen.de/plant/index.jsp) is a database framework for the comparative analysis and visualization of plant genome data. The resource has been updated with new data sets and types as well as specialized tools and interfaces to address user demands for intuitive access to complex plant genome data. In its latest incarnation, we have re-worked both the layout and navigation structure and implemented new keyword search options and a new BLAST sequence search functionality. Actively involved in corresponding sequencing consortia, PlantsDB has dedicated special efforts to the integration and visualization of complex triticeae genome data, especially for barley, wheat and rye. We enhanced CrowsNest, a tool to visualize syntenic relationships between genomes, with data from the wheat sub-genome progenitor Aegilops tauschii and added functionality to the PGSB RNASeqExpressionBrowser. GenomeZipper results were integrated for the genomes of barley, rye, wheat and perennial ryegrass and interactive access is granted through PlantsDB interfaces. Data exchange and cross-linking between PlantsDB and other plant genome databases is stimulated by the transPLANT project (http://transplantdb.eu/). PMID:26527721

  1. Influence of low air humidity and low root temperature on water uptake, growth and aquaporin expression in rice plants.

    PubMed

    Kuwagata, Tsuneo; Ishikawa-Sakurai, Junko; Hayashi, Hidehiro; Nagasuga, Kiyoshi; Fukushi, Keiko; Ahamed, Arifa; Takasugi, Katsuko; Katsuhara, Maki; Murai-Hatano, Mari

    2012-08-01

    The effects of low air humidity and low root temperature (LRT) on water uptake, growth and aquaporin gene expression were investigated in rice plants. The daily transpiration of the plants grown at low humidity was 1.5- to 2-fold higher than that at high humidity. LRT at 13°C reduced transpiration, and the extent was larger at lower humidity. LRT also reduced total dry matter production and leaf area expansion, and the extent was again larger at lower humidity. These observations suggest that the suppression of plant growth by LRT is associated with water stress due to decreased water uptake ability of the root. On the other hand, the net assimilation rate was not affected by low humidity and LRT, and water use efficiency was larger for LRT. We found that low humidity induced coordinated up-regulation of many PIP and TIP aquaporin genes in both the leaves and the roots. Expression levels of two root-specific aquaporin genes, OsPIP2;4 and OsPIP2;5, were increased significantly after 6 and 13 d of LRT exposure. Taken together, we discuss the possibility that aquaporins are part of an integrated response of this crop to low air humidity and LRT. PMID:22685088

  2. Monoubiquitin-dependent endocytosis of the iron-regulated transporter 1 (IRT1) transporter controls iron uptake in plants.

    PubMed

    Barberon, Marie; Zelazny, Enric; Robert, Stéphanie; Conéjéro, Geneviève; Curie, Cathy; Friml, Jìrí; Vert, Grégory

    2011-08-01

    Plants take up iron from the soil using the iron-regulated transporter 1 (IRT1) high-affinity iron transporter at the root surface. Sophisticated regulatory mechanisms allow plants to tightly control the levels of IRT1, ensuring optimal absorption of essential but toxic iron. Here, we demonstrate that overexpression of Arabidopsis thaliana IRT1 leads to constitutive IRT1 protein accumulation, metal overload, and oxidative stress. IRT1 is unexpectedly found in trans-Golgi network/early endosomes of root hair cells, and its levels and localization are unaffected by iron nutrition. Using pharmacological approaches, we show that IRT1 cycles to the plasma membrane to perform iron and metal uptake at the cell surface and is sent to the vacuole for proper turnover. We also prove that IRT1 is monoubiquitinated on several cytosol-exposed residues in vivo and that mutation of two putative monoubiquitination target residues in IRT1 triggers stabilization at the plasma membrane and leads to extreme lethality. Together, these data suggest a model in which monoubiquitin-dependent internalization/sorting and turnover keep the plasma membrane pool of IRT1 low to ensure proper iron uptake and to prevent metal toxicity. More generally, our work demonstrates the existence of monoubiquitin-dependent trafficking to lytic vacuoles in plants and points to proteasome-independent turnover of plasma membrane proteins.

  3. Influence of low air humidity and low root temperature on water uptake, growth and aquaporin expression in rice plants.

    PubMed

    Kuwagata, Tsuneo; Ishikawa-Sakurai, Junko; Hayashi, Hidehiro; Nagasuga, Kiyoshi; Fukushi, Keiko; Ahamed, Arifa; Takasugi, Katsuko; Katsuhara, Maki; Murai-Hatano, Mari

    2012-08-01

    The effects of low air humidity and low root temperature (LRT) on water uptake, growth and aquaporin gene expression were investigated in rice plants. The daily transpiration of the plants grown at low humidity was 1.5- to 2-fold higher than that at high humidity. LRT at 13°C reduced transpiration, and the extent was larger at lower humidity. LRT also reduced total dry matter production and leaf area expansion, and the extent was again larger at lower humidity. These observations suggest that the suppression of plant growth by LRT is associated with water stress due to decreased water uptake ability of the root. On the other hand, the net assimilation rate was not affected by low humidity and LRT, and water use efficiency was larger for LRT. We found that low humidity induced coordinated up-regulation of many PIP and TIP aquaporin genes in both the leaves and the roots. Expression levels of two root-specific aquaporin genes, OsPIP2;4 and OsPIP2;5, were increased significantly after 6 and 13 d of LRT exposure. Taken together, we discuss the possibility that aquaporins are part of an integrated response of this crop to low air humidity and LRT.

  4. Metal and metalloid foliar uptake by various plant species exposed to atmospheric industrial fallout: mechanisms involved for lead.

    PubMed

    Schreck, E; Foucault, Y; Sarret, G; Sobanska, S; Cécillon, L; Castrec-Rouelle, M; Uzu, G; Dumat, C

    2012-06-15

    Fine and ultrafine metallic particulate matters (PMs) are emitted from metallurgic activities in peri-urban zones into the atmosphere and can be deposited in terrestrial ecosystems. The foliar transfer of metals and metalloids and their fate in plant leaves remain unclear, although this way of penetration may be a major contributor to the transfer of metals into plants. This study focused on the foliar uptake of various metals and metalloids from enriched PM (Cu, Zn, Cd, Sn, Sb, As, and especially lead (Pb)) resulting from the emissions of a battery-recycling factory. Metal and metalloid foliar uptake by various vegetable species, exhibiting different morphologies, use (food or fodder) and life-cycle (lettuce, parsley and rye-grass) were studied. The mechanisms involved in foliar metal transfer from atmospheric particulate matter fallout, using lead (Pb) as a model element was also investigated. Several complementary techniques (micro-X-ray fluorescence, scanning electron microscopy coupled with energy dispersive X-ray microanalysis and time-of-flight secondary ion mass spectrometry) were used to investigate the localization and the speciation of lead in their edible parts, i.e. leaves. The results showed lead-enriched PM on the surface of plant leaves. Biogeochemical transformations occurred on the leaf surfaces with the formation of lead secondary species (PbCO(3) and organic Pb). Some compounds were internalized in their primary form (PbSO(4)) underneath an organic layer. Internalization through the cuticle or penetration through stomata openings are proposed as two major mechanisms involved in foliar uptake of particulate matter. PMID:22560244

  5. Metal and metalloid foliar uptake by various plant species exposed to atmospheric industrial fallout: mechanisms involved for lead.

    PubMed

    Schreck, E; Foucault, Y; Sarret, G; Sobanska, S; Cécillon, L; Castrec-Rouelle, M; Uzu, G; Dumat, C

    2012-06-15

    Fine and ultrafine metallic particulate matters (PMs) are emitted from metallurgic activities in peri-urban zones into the atmosphere and can be deposited in terrestrial ecosystems. The foliar transfer of metals and metalloids and their fate in plant leaves remain unclear, although this way of penetration may be a major contributor to the transfer of metals into plants. This study focused on the foliar uptake of various metals and metalloids from enriched PM (Cu, Zn, Cd, Sn, Sb, As, and especially lead (Pb)) resulting from the emissions of a battery-recycling factory. Metal and metalloid foliar uptake by various vegetable species, exhibiting different morphologies, use (food or fodder) and life-cycle (lettuce, parsley and rye-grass) were studied. The mechanisms involved in foliar metal transfer from atmospheric particulate matter fallout, using lead (Pb) as a model element was also investigated. Several complementary techniques (micro-X-ray fluorescence, scanning electron microscopy coupled with energy dispersive X-ray microanalysis and time-of-flight secondary ion mass spectrometry) were used to investigate the localization and the speciation of lead in their edible parts, i.e. leaves. The results showed lead-enriched PM on the surface of plant leaves. Biogeochemical transformations occurred on the leaf surfaces with the formation of lead secondary species (PbCO(3) and organic Pb). Some compounds were internalized in their primary form (PbSO(4)) underneath an organic layer. Internalization through the cuticle or penetration through stomata openings are proposed as two major mechanisms involved in foliar uptake of particulate matter.

  6. Light quanta modulated characteristics of Ni uptake by Brassica juncea seedlings: the interdependence of plant metal concentration and biomass.

    PubMed

    Dasgupta-Schubert, N; Whelan, T; Reyes, M A; Lloren, C; Brandt, T T; Persans, M W

    2007-01-01

    The relationships between the concentration of metal in the growth medium, Cs, the concentration of metal absorbed by the plant, Cp, and the total biomass achieved, M, all of which are factors relevant to the efficiency of metal uptake and tolerance by the plant, have been investigated via the physiological response of Brassica juncea seedlings to Ni stress. The factorial growth experiments treated the Ni concentration in agar medium and the diurnal light quanta as independently variable parameters. Observations included the evidence of light enhancement of Ni toxicity in the root, as well as at the whole-plant level. The shoot mass index possibly is an indicator of the amount of shoot metal sequestration in B. juncea, as are the logarithmic variation of Cp with Cs and the power-law dependence of M on Cp. The sum total of these observations indicates that, for the Ni accumulating plant B. juncea, the overall metabolic allocation to either growth or metal tolerance of the plant is important. Neither a rapid biomass increase nor a high metal absorbed concentration favored the removal of high metal mass from the medium. Rather, the plants with a moderate rate of biomass growth and a moderate absorbed metal concentration demonstrated the ability to remove the maximum mass of metal from the medium. The implication of these results as related to the extant model of phyoextraction efficiency is discussed.

  7. Plant uptake of diclofenac in a mesocosm-scale free water surface constructed wetland by Cyperus alternifolius.

    PubMed

    Zhai, Jun; Rahaman, Md Hasibur; Ji, Jiucui; Luo, Zhiyoung; Wang, Quanfeng; Xiao, Haiwen; Wang, Kunping

    2016-01-01

    This study aimed to assess the uptake of diclofenac, a widely used nonsteroidal anti-inflammatory pharmaceutical, by a macrophyte Cyperus alternifolius in a mesocosm-scale free water surface (FWS) constructed wetland. Quantitative analysis of diclofenac concentrations in water solution and plant tissues was conducted by high performance liquid chromatography analysis after sample pre-treatment with solid-phase extraction and liquid extraction, respectively. The FWS with Cyperus alternifolius obtained a maximum 69.3% diclofenac removal efficiency, while a control system without plant only had a removal efficiency of 2.7% at the end of the experiment period of 70 days. Based on mass balance study of the experimental system, it was estimated that plant uptake and in-plant conversion of diclofenac contributed about 21.4% of the total diclofenac removal in the mesocosm while the remaining 78.6% diclofenac was eliminated through biotic and abiotic conversion of diclofenac in the water phase. Diclofenac on the root surface and in roots, stems and leaves of Cyperus alternifolius was found at the concentrations of 0.15-2.59 μg/g, 0.21-2.66 μg/g, 0.06-0.53 μg/g, and 0.005-0.02 μg/g of fresh weight of plant tissues, respectively. The maximum bioaccumulation factor of diclofenac was calculated in roots (21.04) followed by root surface (20.49), stems (4.19), and leaves (0.16), respectively. Diclofenac translocation potentiality from root to stem was found below 0.5, suggesting a slow and passive translocation process of diclofenac. Current study demonstrated high potential of Cyperus alternifolius for phytoremediation of diclofenac in FWS and can be applied in other engineered ecosystems. PMID:27332847

  8. Plant uptake of diclofenac in a mesocosm-scale free water surface constructed wetland by Cyperus alternifolius.

    PubMed

    Zhai, Jun; Rahaman, Md Hasibur; Ji, Jiucui; Luo, Zhiyoung; Wang, Quanfeng; Xiao, Haiwen; Wang, Kunping

    2016-01-01

    This study aimed to assess the uptake of diclofenac, a widely used nonsteroidal anti-inflammatory pharmaceutical, by a macrophyte Cyperus alternifolius in a mesocosm-scale free water surface (FWS) constructed wetland. Quantitative analysis of diclofenac concentrations in water solution and plant tissues was conducted by high performance liquid chromatography analysis after sample pre-treatment with solid-phase extraction and liquid extraction, respectively. The FWS with Cyperus alternifolius obtained a maximum 69.3% diclofenac removal efficiency, while a control system without plant only had a removal efficiency of 2.7% at the end of the experiment period of 70 days. Based on mass balance study of the experimental system, it was estimated that plant uptake and in-plant conversion of diclofenac contributed about 21.4% of the total diclofenac removal in the mesocosm while the remaining 78.6% diclofenac was eliminated through biotic and abiotic conversion of diclofenac in the water phase. Diclofenac on the root surface and in roots, stems and leaves of Cyperus alternifolius was found at the concentrations of 0.15-2.59 μg/g, 0.21-2.66 μg/g, 0.06-0.53 μg/g, and 0.005-0.02 μg/g of fresh weight of plant tissues, respectively. The maximum bioaccumulation factor of diclofenac was calculated in roots (21.04) followed by root surface (20.49), stems (4.19), and leaves (0.16), respectively. Diclofenac translocation potentiality from root to stem was found below 0.5, suggesting a slow and passive translocation process of diclofenac. Current study demonstrated high potential of Cyperus alternifolius for phytoremediation of diclofenac in FWS and can be applied in other engineered ecosystems.

  9. Increasing plant use of organic nitrogen with elevation is reflected in nitrogen uptake rates and ecosystem delta15N.

    PubMed

    Averill, Colin; Finzi, Adrien

    2011-04-01

    It is hypothesized that decreasing mean annual temperature and rates of nitrogen (N) cycling causes plants to switch from inorganic to organic forms of N as the primary mode of N nutrition. To test this hypothesis, we conducted field experiments and collected natural-abundance delta15N signatures of foliage, soils, and ectomycorrhizal sporocarps along a steep elevation-climate gradient in the White Mountains, New Hampshire, USA. Here we show that with increasing elevation organic forms of N became the dominant source of N taken up by hardwood and coniferous tree species based on dual-labeled glycine uptake analysis, an important confirmation of an emerging theory for the biogeochemistry of the N cycle. Variation in natural abundance foliar delta15N with elevation was also consistent with increasing organic N uptake, though a simple, mass balance model demonstrated that the uptake of delta15N depleted inorganic N, rather than fractionation upon transfer of N from mycorrhizal fungi, best explains variations in foliar delta15N with elevation.

  10. The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses

    PubMed Central

    Cooper, Laurel; Walls, Ramona L.; Elser, Justin; Gandolfo, Maria A.; Stevenson, Dennis W.; Smith, Barry; Preece, Justin; Athreya, Balaji; Mungall, Christopher J.; Rensing, Stefan; Hiss, Manuel; Lang, Daniel; Reski, Ralf; Berardini, Tanya Z.; Li, Donghui; Huala, Eva; Schaeffer, Mary; Menda, Naama; Arnaud, Elizabeth; Shrestha, Rosemary; Yamazaki, Yukiko; Jaiswal, Pankaj

    2013-01-01

    The Plant Ontology (PO; http://www.plantontology.org/) is a publicly available, collaborative effort to develop and maintain a controlled, structured vocabulary (‘ontology’) of terms to describe plant anatomy, morphology and the stages of plant development. The goals of the PO are to link (annotate) gene expression and phenotype data to plant structures and stages of plant development, using the data model adopted by the Gene Ontology. From its original design covering only rice, maize and Arabidopsis, the scope of the PO has been expanded to include all green plants. The PO was the first multispecies anatomy ontology developed for the annotation of genes and phenotypes. Also, to our knowledge, it was one of the first biological ontologies that provides translations (via synonyms) in non-English languages such as Japanese and Spanish. As of Release #18 (July 2012), there are about 2.2 million annotations linking PO terms to >110,000 unique data objects representing genes or gene models, proteins, RNAs, germplasm and quantitative trait loci (QTLs) from 22 plant species. In this paper, we focus on the plant anatomical entity branch of the PO, describing the organizing principles, resources available to users and examples of how the PO is integrated into other plant genomics databases and web portals. We also provide two examples of comparative analyses, demonstrating how the ontology structure and PO-annotated data can be used to discover the patterns of expression of the LEAFY (LFY) and terpene synthase (TPS) gene homologs. PMID:23220694

  11. The plant ontology as a tool for comparative plant anatomy and genomic analyses.

    PubMed

    Cooper, Laurel; Walls, Ramona L; Elser, Justin; Gandolfo, Maria A; Stevenson, Dennis W; Smith, Barry; Preece, Justin; Athreya, Balaji; Mungall, Christopher J; Rensing, Stefan; Hiss, Manuel; Lang, Daniel; Reski, Ralf; Berardini, Tanya Z; Li, Donghui; Huala, Eva; Schaeffer, Mary; Menda, Naama; Arnaud, Elizabeth; Shrestha, Rosemary; Yamazaki, Yukiko; Jaiswal, Pankaj

    2013-02-01

    The Plant Ontology (PO; http://www.plantontology.org/) is a publicly available, collaborative effort to develop and maintain a controlled, structured vocabulary ('ontology') of terms to describe plant anatomy, morphology and the stages of plant development. The goals of the PO are to link (annotate) gene expression and phenotype data to plant structures and stages of plant development, using the data model adopted by the Gene Ontology. From its original design covering only rice, maize and Arabidopsis, the scope of the PO has been expanded to include all green plants. The PO was the first multispecies anatomy ontology developed for the annotation of genes and phenotypes. Also, to our knowledge, it was one of the first biological ontologies that provides translations (via synonyms) in non-English languages such as Japanese and Spanish. As of Release #18 (July 2012), there are about 2.2 million annotations linking PO terms to >110,000 unique data objects representing genes or gene models, proteins, RNAs, germplasm and quantitative trait loci (QTLs) from 22 plant species. In this paper, we focus on the plant anatomical entity branch of the PO, describing the organizing principles, resources available to users and examples of how the PO is integrated into other plant genomics databases and web portals. We also provide two examples of comparative analyses, demonstrating how the ontology structure and PO-annotated data can be used to discover the patterns of expression of the LEAFY (LFY) and terpene synthase (TPS) gene homologs. PMID:23220694

  12. Uptake of polycyclic aromatic hydrocarbons (PAHs) in salt marsh plants Spartina alterniflora grown in contaminated sediments.

    PubMed

    Watts, Alison Weatherly; Ballestero, Thomas P; Gardner, Kevin H

    2006-03-01

    Polycyclic aromatic hydrocarbon (PAH) concentrations were measured in Spartina alterniflora plants grown in pots of contaminated sediment, plants grown in native sediment at a marsh contaminated with up to 900 microg/g total PAHs, and from plants grown in uncontaminated control sediment. The roots and leaves of the plants were separated, cleaned, and analyzed for PAHs. PAH compounds were detected at up to 43 microg/g dry weight in the root tissue of plants grown in pots of contaminated soil. PAH compounds were detected at up to 0.2 microg/g in the leaves of plants grown in pots of contaminated soil. Concentrations less than 0.004 microg/g were detected in the leaves of plants grown at a reference site. Root concentration factor (RCF) values ranged from 0.009 to 0.97 in the potted plants, and from 0.004 to 0.31 at the contaminated marsh site. Stem concentration factor (SCF) values ranged from 0.00004 to 0.03 in the potted plants and 0.0002 to 0.04 at the contaminated marsh. No correlation was found between the RCF value and PAH compound or chemical properties such as logKOW. SCF values were higher for the lighter PAHs in the potted plants, but not in the plants collected from the contaminated marsh. PAH concentrations in the roots of the potted plants are strongly correlated with soil concentrations, but there is less correlation for the roots grown in natural sediments. Additional plants were grown directly in PAH-contaminated water and analyzed for alkylated PAH homologs. No difference was found in leaf PAH concentrations between plants grown in contaminated water and control plants.

  13. Contrasting effects of biochar, compost and farm manure on alleviation of nickel toxicity in maize (Zea mays L.) in relation to plant growth, photosynthesis and metal uptake.

    PubMed

    Rehman, Muhammad Zia-Ur; Rizwan, Muhammad; Ali, Shafaqat; Fatima, Nida; Yousaf, Balal; Naeem, Asif; Sabir, Muhammad; Ahmad, Hamaad Raza; Ok, Yong Sik

    2016-11-01

    Nickel (Ni) toxicity in agricultural crops is a widespread problem while little is known about the role of biochar (BC) and other organic amendments like farm manure (FM) from cattle farm and compost (Cmp) on its alleviation. A greenhouse experiment was conducted to evaluate the effects of BC, Cmp and FM on physiological and biochemical characteristics of maize (Zea mays L.) under Ni stress. Maize was grown in Ni spiked soil without and with two rates of the amendments (equivalent to 1% and 2% organic carbon, OC) applied separately to the soil. After harvest, plant height, root length, dry weight, chlorophyll contents, gas exchange characteristics and trace elements in plants were determined. In addition, post-harvest soil characteristics like pHs, ECe and bioavailable Ni were also determined. Compared to the control, all of the amendments increased plant height, root length, shoot and root dry weight with the maximum increase in all parameters by FM (2% OC) treatment. Similarly, total chlorophyll contents and gas exchange characteristics significantly increased with the application of amendments being maximum with FM (2% OC) application. Amendments significantly increased copper, zinc, manganese and iron concentrations and decreased Ni concentrations in the plants. The highest reduction in shoot Ni concentration was recorded with FM (2% OC) followed by BC (2% OC) being 73.2% and 61.1% lower compared to the control, respectively. The maximum increase in soil pH and decrease in AB-DTPA extractable Ni was recorded with BC (2% OC) followed by FM (2% OC). It is concluded that FM (2% OC) was the most effective in reducing Ni toxicity to plants by reducing Ni uptake while BC (2% OC) was the most effective in decreasing bioavailable Ni in the soil through increasing soil pH. However, long-term field studies are needed to evaluate the effects of these amendments in reducing Ni toxicity in plants. PMID:27467022

  14. Contrasting effects of biochar, compost and farm manure on alleviation of nickel toxicity in maize (Zea mays L.) in relation to plant growth, photosynthesis and metal uptake.

    PubMed

    Rehman, Muhammad Zia-Ur; Rizwan, Muhammad; Ali, Shafaqat; Fatima, Nida; Yousaf, Balal; Naeem, Asif; Sabir, Muhammad; Ahmad, Hamaad Raza; Ok, Yong Sik

    2016-11-01

    Nickel (Ni) toxicity in agricultural crops is a widespread problem while little is known about the role of biochar (BC) and other organic amendments like farm manure (FM) from cattle farm and compost (Cmp) on its alleviation. A greenhouse experiment was conducted to evaluate the effects of BC, Cmp and FM on physiological and biochemical characteristics of maize (Zea mays L.) under Ni stress. Maize was grown in Ni spiked soil without and with two rates of the amendments (equivalent to 1% and 2% organic carbon, OC) applied separately to the soil. After harvest, plant height, root length, dry weight, chlorophyll contents, gas exchange characteristics and trace elements in plants were determined. In addition, post-harvest soil characteristics like pHs, ECe and bioavailable Ni were also determined. Compared to the control, all of the amendments increased plant height, root length, shoot and root dry weight with the maximum increase in all parameters by FM (2% OC) treatment. Similarly, total chlorophyll contents and gas exchange characteristics significantly increased with the application of amendments being maximum with FM (2% OC) application. Amendments significantly increased copper, zinc, manganese and iron concentrations and decreased Ni concentrations in the plants. The highest reduction in shoot Ni concentration was recorded with FM (2% OC) followed by BC (2% OC) being 73.2% and 61.1% lower compared to the control, respectively. The maximum increase in soil pH and decrease in AB-DTPA extractable Ni was recorded with BC (2% OC) followed by FM (2% OC). It is concluded that FM (2% OC) was the most effective in reducing Ni toxicity to plants by reducing Ni uptake while BC (2% OC) was the most effective in decreasing bioavailable Ni in the soil through increasing soil pH. However, long-term field studies are needed to evaluate the effects of these amendments in reducing Ni toxicity in plants.

  15. Non-structural carbohydrates in woody plants compared among laboratories.

    PubMed

    Quentin, Audrey G; Pinkard, Elizabeth A; Ryan, Michael G; Tissue, David T; Baggett, L Scott; Adams, Henry D; Maillard, Pascale; Marchand, Jacqueline; Landhäusser, Simon M; Lacointe, André; Gibon, Yves; Anderegg, William R L; Asao, Shinichi; Atkin, Owen K; Bonhomme, Marc; Claye, Caroline; Chow, Pak S; Clément-Vidal, Anne; Davies, Noel W; Dickman, L Turin; Dumbur, Rita; Ellsworth, David S; Falk, Kristen; Galiano, Lucía; Grünzweig, José M; Hartmann, Henrik; Hoch, Günter; Hood, Sharon; Jones, Joanna E; Koike, Takayoshi; Kuhlmann, Iris; Lloret, Francisco; Maestro, Melchor; Mansfield, Shawn D; Martínez-Vilalta, Jordi; Maucourt, Mickael; McDowell, Nathan G; Moing, Annick; Muller, Bertrand; Nebauer, Sergio G; Niinemets, Ülo; Palacio, Sara; Piper, Frida; Raveh, Eran; Richter, Andreas; Rolland, Gaëlle; Rosas, Teresa; Saint Joanis, Brigitte; Sala, Anna; Smith, Renee A; Sterck, Frank; Stinziano, Joseph R; Tobias, Mari; Unda, Faride; Watanabe, Makoto; Way, Danielle A; Weerasinghe, Lasantha K; Wild, Birgit; Wiley, Erin; Woodruff, David R

    2015-11-01

    Non-structural carbohydrates (NSC) in plant tissue are frequently quantified to make inferences about plant responses to environmental conditions. Laboratories publishing estimates of NSC of woody plants use many different methods to evaluate NSC. We asked whether NSC estimates in the recent literature could be quantitatively compared among studies. We also asked whether any differences among laboratories were related to the extraction and quantification methods used to determine starch and sugar concentrations. These questions were addressed by sending sub-samples collected from five woody plant tissues, which varied in NSC content and chemical composition, to 29 laboratories. Each laboratory analyzed the samples with their laboratory-specific protocols, based on recent publications, to determine concentrations of soluble sugars, starch and their sum, total NSC. Laboratory estimates differed substantially for all samples. For example, estimates for Eucalyptus globulus leaves (EGL) varied from 23 to 116 (mean = 56) mg g(-1) for soluble sugars, 6-533 (mean = 94) mg g(-1) for starch and 53-649 (mean = 153) mg g(-1) for total NSC. Mixed model analysis of variance showed that much of the variability among laboratories was unrelated to the categories we used for extraction and quantification methods (method category R(2) = 0.05-0.12 for soluble sugars, 0.10-0.33 for starch and 0.01-0.09 for total NSC). For EGL, the difference between the highest and lowest least squares means for categories in the mixed model analysis was 33 mg g(-1) for total NSC, compared with the range of laboratory estimates of 596 mg g(-1). Laboratories were reasonably consistent in their ranks of estimates among tissues for starch (r = 0.41-0.91), but less so for total NSC (r = 0.45-0.84) and soluble sugars (r = 0.11-0.83). Our results show that NSC estimates for woody plant tissues cannot be compared among laboratories. The relative changes in NSC between treatments measured within a laboratory

  16. Non-structural carbohydrates in woody plants compared among laboratories.

    PubMed

    Quentin, Audrey G; Pinkard, Elizabeth A; Ryan, Michael G; Tissue, David T; Baggett, L Scott; Adams, Henry D; Maillard, Pascale; Marchand, Jacqueline; Landhäusser, Simon M; Lacointe, André; Gibon, Yves; Anderegg, William R L; Asao, Shinichi; Atkin, Owen K; Bonhomme, Marc; Claye, Caroline; Chow, Pak S; Clément-Vidal, Anne; Davies, Noel W; Dickman, L Turin; Dumbur, Rita; Ellsworth, David S; Falk, Kristen; Galiano, Lucía; Grünzweig, José M; Hartmann, Henrik; Hoch, Günter; Hood, Sharon; Jones, Joanna E; Koike, Takayoshi; Kuhlmann, Iris; Lloret, Francisco; Maestro, Melchor; Mansfield, Shawn D; Martínez-Vilalta, Jordi; Maucourt, Mickael; McDowell, Nathan G; Moing, Annick; Muller, Bertrand; Nebauer, Sergio G; Niinemets, Ülo; Palacio, Sara; Piper, Frida; Raveh, Eran; Richter, Andreas; Rolland, Gaëlle; Rosas, Teresa; Saint Joanis, Brigitte; Sala, Anna; Smith, Renee A; Sterck, Frank; Stinziano, Joseph R; Tobias, Mari; Unda, Faride; Watanabe, Makoto; Way, Danielle A; Weerasinghe, Lasantha K; Wild, Birgit; Wiley, Erin; Woodruff, David R

    2015-11-01

    Non-structural carbohydrates (NSC) in plant tissue are frequently quantified to make inferences about plant responses to environmental conditions. Laboratories publishing estimates of NSC of woody plants use many different methods to evaluate NSC. We asked whether NSC estimates in the recent literature could be quantitatively compared among studies. We also asked whether any differences among laboratories were related to the extraction and quantification methods used to determine starch and sugar concentrations. These questions were addressed by sending sub-samples collected from five woody plant tissues, which varied in NSC content and chemical composition, to 29 laboratories. Each laboratory analyzed the samples with their laboratory-specific protocols, based on recent publications, to determine concentrations of soluble sugars, starch and their sum, total NSC. Laboratory estimates differed substantially for all samples. For example, estimates for Eucalyptus globulus leaves (EGL) varied from 23 to 116 (mean = 56) mg g(-1) for soluble sugars, 6-533 (mean = 94) mg g(-1) for starch and 53-649 (mean = 153) mg g(-1) for total NSC. Mixed model analysis of variance showed that much of the variability among laboratories was unrelated to the categories we used for extraction and quantification methods (method category R(2) = 0.05-0.12 for soluble sugars, 0.10-0.33 for starch and 0.01-0.09 for total NSC). For EGL, the difference between the highest and lowest least squares means for categories in the mixed model analysis was 33 mg g(-1) for total NSC, compared with the range of laboratory estimates of 596 mg g(-1). Laboratories were reasonably consistent in their ranks of estimates among tissues for starch (r = 0.41-0.91), but less so for total NSC (r = 0.45-0.84) and soluble sugars (r = 0.11-0.83). Our results show that NSC estimates for woody plant tissues cannot be compared among laboratories. The relative changes in NSC between treatments measured within a laboratory

  17. Interactions between salt marsh plants and Cu nanoparticles - Effects on metal uptake and phytoremediation processes.

    PubMed

    Andreotti, Federico; Mucha, Ana Paula; Caetano, Cátia; Rodrigues, Paula; Rocha Gomes, Carlos; Almeida, C Marisa R

    2015-10-01

    The increased use of metallic nanoparticles (NPs) raises the probability of finding NPs in the environment. A lot of information exists already regarding interactions between plants and metals, but information regarding interactions between metallic NPs and plants, including salt marsh plants, is still lacking. This work aimed to study interactions between CuO NPs and the salt marsh plants Halimione portulacoides and Phragmites australis. In addition, the potential of these plants for phytoremediation of Cu NPs was evaluated. Plants were exposed for 8 days to sediment elutriate solution doped either with CuO or with ionic Cu. Afterwards, total metal concentrations were determined in plant tissues. Both plants accumulated Cu in their roots, but this accumulation was 4 to 10 times lower when the metal was added in NP form. For P. australis, metal translocation occurred when the metal was added either in ionic or in NP form, but for H. portulacoides no metal translocation was observed when NPs were added to the medium. Therefore, interactions between plants and NPs differ with the plant species. These facts should be taken in consideration when applying these plants for phytoremediation of contaminated sediments in estuaries, as the environmental management of these very important ecological areas can be affected.

  18. Bioaccessibility of barium from barite contaminated soils based on gastric phase in vitro data and plant uptake.

    PubMed

    Abbasi, Sedigheh; Lamb, Dane T; Palanisami, Thavamani; Kader, Mohammed; Matanitobua, Vitukawalu; Megharaj, Mallavarapu; Naidu, Ravi

    2016-02-01

    Barite contamination of soil commonly occurs from either barite mining or explorative drilling operations. This work reported in vitro data for barite contaminated soils using the physiologically based extraction test (PBET) methodology. The existence of barite in plant tissue and the possibility of 'biomineralised' zones was also investigated using Scanning Electron Microscopy. Soils with low barium (Ba) concentrations showed a higher proportion of Ba extractability than barite rich samples. Barium uptake to spinach from soil was different between short term spiking studies and field weathered soils. Furthermore, Ba crystals were not evident in spinach tissue or acid digest solutions grown in barium nitrate spiked soils despite high accumulation. Barite was found in the plant digest solutions from barite contaminated soils only. Results indicate that under the conservative assumptions made, a child would need to consume extreme quantities of soil over an extended period to cause chronic health problems.

  19. Bioaccessibility of barium from barite contaminated soils based on gastric phase in vitro data and plant uptake.

    PubMed

    Abbasi, Sedigheh; Lamb, Dane T; Palanisami, Thavamani; Kader, Mohammed; Matanitobua, Vitukawalu; Megharaj, Mallavarapu; Naidu, Ravi

    2016-02-01

    Barite contamination of soil commonly occurs from either barite mining or explorative drilling operations. This work reported in vitro data for barite contaminated soils using the physiologically based extraction test (PBET) methodology. The existence of barite in plant tissue and the possibility of 'biomineralised' zones was also investigated using Scanning Electron Microscopy. Soils with low barium (Ba) concentrations showed a higher proportion of Ba extractability than barite rich samples. Barium uptake to spinach from soil was different between short term spiking studies and field weathered soils. Furthermore, Ba crystals were not evident in spinach tissue or acid digest solutions grown in barium nitrate spiked soils despite high accumulation. Barite was found in the plant digest solutions from barite contaminated soils only. Results indicate that under the conservative assumptions made, a child would need to consume extreme quantities of soil over an extended period to cause chronic health problems. PMID:26495826

  20. Impact of phosphate-solubilizing fungi on the yield and phosphorus-uptake by wheat and faba bean plants.

    PubMed

    Wahid, O A; Mehana, T A

    2000-09-01

    Three fungal isolates (phosphate-dissolvers), Aspergillus niger, A. fumigatus and Penicillium pinophilum were isolated from the rhizosphere of different plants grown in Ismailia and South Sinai Governorates. They effectively solubilized rock phosphate or tricalcium phosphate in Pikovskaya's liquid medium. In pot and column experiments, they significantly reduced pH and increased available phosphorus in the soil treated with either rock phosphate or superphosphate. The yield components of wheat and faba bean plants increased as a result of soil inoculation with the isolated fungi. Penicillium pinophilum was the most efficient isolate. It increased the yield of wheat grains by 28.9 and 32.8% in the soil treated with rock phosphate and superphosphate, respectively. Similarly, it increased the production of faba bean seeds by 14.7 and 29.4% with the same treatments. The uptake of phosphorus by both crops significantly increased due to inoculation of the soil with the tested fungi.

  1. Biochar addition to an arsenic contaminated soil increases arsenic concentrations in the pore water but reduces uptake to tomato plants (Solanum lycopersicum L.).

    PubMed

    Beesley, Luke; Marmiroli, Marta; Pagano, Luca; Pigoni, Veronica; Fellet, Guido; Fresno, Teresa; Vamerali, Teofilo; Bandiera, Marianna; Marmiroli, Nelson

    2013-06-01

    Arsenic (As) concentrations in soil, soil pore water and plant tissues were evaluated in a pot experiment following the transplantation of tomato (Solanum lycopersicum L.) plantlets to a heavily As contaminated mine soil (~6000 mg kg(-1) pseudo-total As) receiving an orchard prune residue biochar amendment, with and without NPK fertiliser. An in-vitro test was also performed to establish if tomato seeds were able to germinate in various proportions of biochar added to nutrient solution (MS). Biochar significantly increased arsenic concentrations in pore water (500 μg L(-1)-2000 μg L(-1)) whilst root and shoot concentrations were significantly reduced compared to the control without biochar. Fruit As concentrations were very low (<3 μg kg(-1)), indicating minimal toxicity and transfer risk. Fertilisation was required to significantly increase plant biomass above the control after biochar addition whilst plants transplanted to biochar only were heavily stunted and chlorotic. Given that increasing the amount of biochar added to nutrient solution in-vitro reduced seed germination by up to 40%, a lack of balanced nutrient provision from biochar could be concluded. In summary, solubility and mobility of As were increased by biochar addition to this soil, but uptake to plant was reduced, and toxicity-transfer risk was negligible. Therefore leaching rather than food chain transfer appears the most probable immediate consequence of biochar addition to As contaminated soils. PMID:23583727

  2. The Contribution of Plant in Uptaking Radio Iodine from the Soil in Zahedan City, Sistan and Blouchestan, Iran

    NASA Astrophysics Data System (ADS)

    Hosseini, S. A.

    In order to determine contribution of plant in radioiodine uptake, soil-to-plant concentration ratios of radioiodine from soil to agricultural crops are needed and so we carried out radiotracer experiments. The mean values of concentration ratio (on a wet weight basis) of radioiodine from soil to edible parts of crops in podzol were as follows: lentil, 0.054; pea, 0.012; wheat, 0.040 and red bean, 0.068. The mean values of the radioiodine concentrations in plant parts of red bean, lentil, wheat and pea (on a wet weight basis) were 4.32, 3.43, 2.64 and 1.0 kBq kg-1, respectively. We also studied the distribution of the radioiodine in the crops. There was a tendency for the concentration ratio of stem to be higher than those of root and leaves. A very high concentration ratio was found for root of red bean; because this plant was studied at a growth stage different from that of the other plants. The data obtained in this study should be useful in assessing the behavior of long-lived 129I (half life: 1.57x107 year) released from nuclear fuel cycle.

  3. Endophytic Cultivable Bacteria of the Metal Bioaccumulator Spartina maritima Improve Plant Growth but Not Metal Uptake in Polluted Marshes Soils.

    PubMed

    Mesa, Jennifer; Mateos-Naranjo, Enrique; Caviedes, Miguel A; Redondo-Gómez, Susana; Pajuelo, Eloisa; Rodríguez-Llorente, Ignacio D

    2015-01-01

    Endophytic bacterial population was isolated from Spartina maritima tissues, a heavy metal bioaccumulator cordgrass growing in the estuaries of Tinto, Odiel, and Piedras River (south west Spain), one of the most polluted areas in the world. Strains were identified and ability to tolerate salt and heavy metals along with plant growth promoting and enzymatic properties were analyzed. A high proportion of these bacteria were resistant toward one or several heavy metals and metalloids including As, Cu, and Zn, the most abundant in plant tissues and soil. These strains also exhibited multiple enzymatic properties as amylase, cellulase, chitinase, protease and lipase, as well as plant growth promoting properties, including nitrogen fixation, phosphates solubilization, and production of indole-3-acetic acid (IAA), siderophores and 1-aminocyclopropane-1-carboxylate (ACC) deaminase. The best performing strains (Micrococcus yunnanensis SMJ12, Vibrio sagamiensis SMJ18, and Salinicola peritrichatus SMJ30) were selected and tested as a consortium by inoculating S. maritima wild plantlets in greenhouse conditions along with wild polluted soil. After 30 days, bacterial inoculation improved plant photosynthetic traits and favored intrinsic water use efficiency. However, far from stimulating plant metal uptake, endophytic inoculation lessened metal accumulation in above and belowground tissues. These results suggest that inoculation of S. maritima with indigenous metal-resistant endophytes could mean a useful approach in order to accelerate both adaption and growth of this indigenous cordgrass in polluted estuaries in restorative operations, but may not be suitable for rhizoaccumulation purposes. PMID:26733985

  4. Endophytic Cultivable Bacteria of the Metal Bioaccumulator Spartina maritima Improve Plant Growth but Not Metal Uptake in Polluted Marshes Soils

    PubMed Central

    Mesa, Jennifer; Mateos-Naranjo, Enrique; Caviedes, Miguel A.; Redondo-Gómez, Susana; Pajuelo, Eloisa; Rodríguez-Llorente, Ignacio D.

    2015-01-01

    Endophytic bacterial population was isolated from Spartina maritima tissues, a heavy metal bioaccumulator cordgrass growing in the estuaries of Tinto, Odiel, and Piedras River (south west Spain), one of the most polluted areas in the world. Strains were identified and ability to tolerate salt and heavy metals along with plant growth promoting and enzymatic properties were analyzed. A high proportion of these bacteria were resistant toward one or several heavy metals and metalloids including As, Cu, and Zn, the most abundant in plant tissues and soil. These strains also exhibited multiple enzymatic properties as amylase, cellulase, chitinase, protease and lipase, as well as plant growth promoting properties, including nitrogen fixation, phosphates solubilization, and production of indole-3-acetic acid (IAA), siderophores and 1-aminocyclopropane-1-carboxylate (ACC) deaminase. The best performing strains (Micrococcus yunnanensis SMJ12, Vibrio sagamiensis SMJ18, and Salinicola peritrichatus SMJ30) were selected and tested as a consortium by inoculating S. maritima wild plantlets in greenhouse conditions along with wild polluted soil. After 30 days, bacterial inoculation improved plant photosynthetic traits and favored intrinsic water use efficiency. However, far from stimulating plant metal uptake, endophytic inoculation lessened metal accumulation in above and belowground tissues. These results suggest that inoculation of S. maritima with indigenous metal-resistant endophytes could mean a useful approach in order to accelerate both adaption and growth of this indigenous cordgrass in polluted estuaries in restorative operations, but may not be suitable for rhizoaccumulation purposes. PMID:26733985

  5. Investigating uptake of water-dispersible CdSe/ZnS quantum dot nanoparticles by Arabidopsis thaliana plants.

    PubMed

    Navarro, Divina A; Bisson, Mary A; Aga, Diana S

    2012-04-15

    Interest on the environmental impacts of engineered nanomaterials has rapidly increased over the past years because it is expected that these materials will eventually be released into the environment. The present work investigates the potential root uptake of water-dispersible CdSe/ZnS quantum dots (QDs) by the model plant species, Arabidopsis thaliana. Experiments revealed that Arabidopsis exposed to QDs that are dispersed in Hoagland's solution for 1-7 days did not internalize intact QDs. Analysis of Cd and Se concentrations in roots and leaves by inductively-coupled plasma mass spectrometry indicated that Cd and Se from QD-treated plants were not translocated into the leaves, and remained in the root system of Arabidopsis. Furthermore, fluorescence microscopy showed strong evidence that the QDs were generally on the outside surfaces of the roots, where the amount of QDs adsorbed is dependent on the stability of the QDs in suspension. Despite no evidence of nanoparticle internalization, the ratio of reduced glutathione levels (GSH) relative to the oxidized glutathione (GSSG) in plants decreased when plants were exposed to QD dispersions containing humic acids, suggesting that QDs caused oxidative stress on the plant at this condition.

  6. Availability Of Deep Groundwater-Derived CO2 For Plant Uptake In A Costa Rican Rainforest

    NASA Astrophysics Data System (ADS)

    Oberbauer, S. F.; Genereux, D. P.; Osburn, C. L.; Dierick, D.; Oviedo Vargas, D.

    2014-12-01

    The role of export of carbon via surface waters has been increasingly appreciated as an important component of ecosystem carbon budgets. However the role of deep regional groundwater as a source of carbon to ecosystems is relatively poorly known. In a lowland rainforest in Costa Rica, inputs of elevated dissolved inorganic C (DIC) in regional groundwater greatly increase stream water C concentrations. Whether that groundwater-derived carbon represents a significant source of elevated CO2 for photosynthesis of riparian plants is unknown. We compared the concentration and δ13C of CO2 in the air above two weir-equipped streams with different inputs of high-DIC regional groundwater. The Taconazo has no inputs, whereas about 40% of stream discharge of the Arboleda is a result of regional groundwater. DIC from regional groundwater experiences little to no within-watershed sequestration and thus augments the C flux out of the watershed with stream flow and possibly the degassing flux from the stream. CO2 concentrations were recorded by Vaisala GMP343 gas analyzer over 24 hr periods above the weirs and in the splash zone below the weirs as well as at a small waterfall on the Sura, the higher order stream that the Arboleda joins, approximately 250 m downstream of the junction. Samples of air δ13C-CO2 taken from unmixed (early morning) and mixed (afternoon) canopy air were measured by mass spectrometer. Concentrations of CO2 at both sites on the Taconozo remained in the normal range of canopy storage of respiratory CO2 (< 600 ppm). In contrast, [CO2] above the Arboleda weir occasionally exceeded 1000 ppm and were generally above normal values of respiratory CO2. Values below the weir by the splash zone were often higher than 1500 ppm and occasionally exceeded 2000 ppm. At the Sura waterfall pulses of high CO2 > 1000 ppm occurred regularly throughout the day. We found higher δ13C-CO2 above the Arboleda compared to the Taconazo, consistent with an enhanced flux of

  7. Screening of medicinal plants for PPPAR-alpha and PPAR-gamma activation and evaluation of their effects on glucose uptake and 3T3-L1 adipogenesis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Medicinal plants are a rich source of ligands for nuclear receptors. The present study was aimed to screen a collection of plant extracts for PPAR-alpha/gamma activating properties and identify the active extract that can stimulate cellular glucose uptake without enhancing the adipogenesis. A report...

  8. Arsenic uptake, arsenite efflux and plant growth in hyperaccumulator Pteris vittata: Role of arsenic-resistant bacteria.

    PubMed

    Han, Yong-He; Fu, Jing-Wei; Chen, Yanshan; Rathinasabapathi, Bala; Ma, Lena Q

    2016-02-01

    Bacteria-mediated arsenic (As) transformation and their impacts on As and P uptake and plant growth in As-hyperaccumulator Pteris vittata (PV) were investigated under sterile condition. All As-resistant bacteria (9 endophytic and 6 rhizospheric) were As-reducers except one As-oxidizer. After growing two months in media with 37.5 mg kg(-1) AsV, As concentrations in the fronds and roots were 3655-5389 (89-91% AsIII) and 971-1467 mg kg(-1) (41-73% AsIII), corresponding to 22-52% decrease in the As in the media. Bacterial inoculation enhanced As and P uptake by up to 47 and 69%, and PV growth by 20-74%, which may be related to elevated As and P in plants (r = 0.88-0.97, p < 0.05). Though AsV was supplied, 95% of the As in the bacteria-free media was AsIII, suggesting efficient efflux of AsIII by PV roots (120 µg g(-1) root fw). This was supported by the fact that no AsV was detected in media inoculated with As-reducers while 95% of AsV was detected with As-oxidizer. Our data showed that, under As-stress, PV reduced As toxicity by efficient AsIII efflux into media and AsIII translocation to the fronds, and bacteria benefited PV growth probably via enhanced As and P uptake. PMID:26547029

  9. Impact of acid effluent from Kawah Ijen crater lake on irrigated agricultural soils: Soil chemical processes and plant uptake

    NASA Astrophysics Data System (ADS)

    van Rotterdam-Los, A. M. D.; Heikens, A.; Vriend, S. P.; van Bergen, M. J.; van Gaans, P. F. M.

    2008-12-01

    Volcanogenic contamination of irrigation water, caused by effluent from the hyperacid Ijen crater lake, has severely affected the properties of agricultural soils in East Java, Indonesia. From a comparison of acidified topsoil with subsoil and with top- and subsoil in a reference area, we identified processes responsible for changes in soil and soil solution chemistry induced by acid irrigation water, with emphasis on the nutrients Ca, Mg, Fe, and Mn, and on Al, which may become phytotoxic under acid conditions in soils. Compositional data for bulk soil composition and selective extractions with 1 M KCl and 0.2 M acid ammonium oxalate are used in a mass balance approach to specify element fluxes, including uptake by rice plants. The results show that input via irrigation water has produced an increase in the total aluminum content in the affected topsoil, which is of the same order of magnitude as the increase in labile Al. High bioavailability of Al, as reflected by concentrations in KCl extracts, is consistent with elevated concentrations observed in rice plants. In contrast, and despite the high input via irrigation water, Ca and Mg concentrations have decreased in all measured soil fractions through dissolution of amorphous phases and minerals, and through competition of Al for adsorption sites on the exchange complex and plant roots. Strong leaching is also evident for Fe and especially Mn. In terms of the overall mass balance of the topsoil, plant uptake of Al, Ca, Fe, Mg and Mn is negligible. If the use of acid irrigation would be stopped and the soil pH were to increase to values above 4.5, the observed phytotoxicity of Al will be halted. However, crops may then become fully dependent on the input from irrigation water or fertilizer for essential elements, due to the previous removal from the topsoil through leaching.

  10. Biochar application to a contaminated soil reduces the availability and plant uptake of zinc, lead and cadmium.

    PubMed

    Puga, A P; Abreu, C A; Melo, L C A; Beesley, L

    2015-08-15

    Heavy metals in soil are naturally occurring but may be enhanced by anthropogenic activities such as mining. Bio-accumulation of heavy metals in the food chain, following their uptake to plants can increase the ecotoxicological risks associated with remediation of contaminated soils using plants. In the current experiment sugar cane straw-derived biochar (BC), produced at 700 °C, was applied to a heavy metal contaminated mine soil at 1.5%, 3.0% and 5.0% (w/w). Jack bean (Canavalia ensiformis) and Mucuna aterrima were grown in pots containing soil and biochar mixtures, and control pots without biochar. Pore water was sampled from each pot to confirm the effects of biochar on metal solubility, whilst soils were analyzed by DTPA extraction to confirm available metal concentrations. Leaves were sampled for SEM analysis to detect possible morphological and anatomical changes. The application of BC decreased the available concentrations of Cd, Pb and Zn in 56, 50 and 54% respectively, in the mine contaminated soil leading to a consistent reduction in the concentration of Zn in the pore water (1st collect: 99 to 39 μg L(-1), 2nd: 97 to 57 μg L(-1) and 3rd: 71 to 12 μg L(-1)). The application of BC reduced the uptake of Cd, Pb and Zn by plants with the jack bean translocating high proportions of metals (especially Cd) to shoots. Metals were also taken up by Mucuna aterrima but translocation to shoot was more limited than for jack bean. There were no differences in the internal structures of leaves observed by scanning electron microscopy. This study indicates that biochar application during mine soil remediation reduce plant concentrations of potential toxic metals. PMID:26048395

  11. Biochar application to a contaminated soil reduces the availability and plant uptake of zinc, lead and cadmium.

    PubMed

    Puga, A P; Abreu, C A; Melo, L C A; Beesley, L

    2015-08-15

    Heavy metals in soil are naturally occurring but may be enhanced by anthropogenic activities such as mining. Bio-accumulation of heavy metals in the food chain, following their uptake to plants can increase the ecotoxicological risks associated with remediation of contaminated soils using plants. In the current experiment sugar cane straw-derived biochar (BC), produced at 700 °C, was applied to a heavy metal contaminated mine soil at 1.5%, 3.0% and 5.0% (w/w). Jack bean (Canavalia ensiformis) and Mucuna aterrima were grown in pots containing soil and biochar mixtures, and control pots without biochar. Pore water was sampled from each pot to confirm the effects of biochar on metal solubility, whilst soils were analyzed by DTPA extraction to confirm available metal concentrations. Leaves were sampled for SEM analysis to detect possible morphological and anatomical changes. The application of BC decreased the available concentrations of Cd, Pb and Zn in 56, 50 and 54% respectively, in the mine contaminated soil leading to a consistent reduction in the concentration of Zn in the pore water (1st collect: 99 to 39 μg L(-1), 2nd: 97 to 57 μg L(-1) and 3rd: 71 to 12 μg L(-1)). The application of BC reduced the uptake of Cd, Pb and Zn by plants with the jack bean translocating high proportions of metals (especially Cd) to shoots. Metals were also taken up by Mucuna aterrima but translocation to shoot was more limited than for jack bean. There were no differences in the internal structures of leaves observed by scanning electron microscopy. This study indicates that biochar application during mine soil remediation reduce plant concentrations of potential toxic metals.

  12. Soil respiration and photosynthetic uptake of carbon dioxide by ground-cover plants in four ages of jack pine forest

    USGS Publications Warehouse

    Striegl, R.G.; Wickland, K.P.

    2001-01-01

    Soil carbon dioxide (CO2) emission (soil respiration), net CO2 exchange after photosynthetic uptake by ground-cover plants, and soil CO2 concentration versus depth below land surface were measured at four ages of jack pine (Pinus banksiana Lamb.) forest in central Saskatchewan. Soil respiration was smallest at a clear-cut site, largest in an 8-year-old stand, and decreased with stand age in 20-year-old and mature (60-75 years old) stands during May-September 1994 (12.1, 34.6, 31.5, and 24.9 mol C??m-2, respectively). Simulations of soil respiration at each stand based on continuously recorded soil temperature were within one standard deviation of measured flux for 48 of 52 measurement periods, but were 10%-30% less than linear interpolations of measured flux for the season. This was probably due to decreased soil respiration at night modeled by the temperature-flux relationships, but not documented by daytime chamber measurements. CO2 uptake by ground-cover plants ranged from 0 at the clear-cut site to 29, 25, and 9% of total growing season soil respiration at the 8-year, 20-year, and mature stands. CO2 concentrations were as great as 7150 ppmv in the upper 1 m of unsaturated zone and were proportional to measured soil respiration.

  13. Plant selective uptake of halogenated flame retardants at an e-waste recycling site in southern China.

    PubMed

    Wang, Shaorui; Wang, Yan; Luo, Chunling; Li, Jun; Yin, Hua; Zhang, Gan

    2016-07-01

    The concentrations and homolog patterns of halogenated flame retardants (HFRs) in vegetables grown at an e-waste contaminated site were investigated. Polybrominated diphenyl ethers (PBDEs) were the dominant HFRs in vegetable tissues, with concentrations ranging from 10.3 to 164 ng g(-1) and 1.16-107 ng g(-1) in shoots and roots, respectively, followed by novel brominated flame retardants (NBFRs) and dechlorane plus (DPs). This is an indication that PBDE contamination in vegetables grown around e-waste recycling sites may pose a risk to the local terrestrial ecosystem and residents. In addition, this is the first report on the concentrations and compositions of NBFRs in vegetables around e-waste recycling sites. The HFRs concentrations in vegetables varied greatly with the vegetable species, with the highest concentrations observed in Brassica oleracea var. capitata. Root concentration factors (RCF) decreased with increasing log Kow of HFRs, which indicated that the uptake of HFRs was controlled mainly by log Kow. Dissimilar HFRs profiles in shoots and roots suggested that the uptake and translocation of HFRs by plants were selective, with lower halogenated congeners prone to accumulation in vegetable tissues. Positive relationships between PBDEs and their substitutes were observed in vegetable tissues, suggesting that the replacement of PBDEs by NBFRs has not resulted in an obvious transition in plants within the study area. PMID:27149147

  14. Plant selective uptake of halogenated flame retardants at an e-waste recycling site in southern China.

    PubMed

    Wang, Shaorui; Wang, Yan; Luo, Chunling; Li, Jun; Yin, Hua; Zhang, Gan

    2016-07-01

    The concentrations and homolog patterns of halogenated flame retardants (HFRs) in vegetables grown at an e-waste contaminated site were investigated. Polybrominated diphenyl ethers (PBDEs) were the dominant HFRs in vegetable tissues, with concentrations ranging from 10.3 to 164 ng g(-1) and 1.16-107 ng g(-1) in shoots and roots, respectively, followed by novel brominated flame retardants (NBFRs) and dechlorane plus (DPs). This is an indication that PBDE contamination in vegetables grown around e-waste recycling sites may pose a risk to the local terrestrial ecosystem and residents. In addition, this is the first report on the concentrations and compositions of NBFRs in vegetables around e-waste recycling sites. The HFRs concentrations in vegetables varied greatly with the vegetable species, with the highest concentrations observed in Brassica oleracea var. capitata. Root concentration factors (RCF) decreased with increasing log Kow of HFRs, which indicated that the uptake of HFRs was controlled mainly by log Kow. Dissimilar HFRs profiles in shoots and roots suggested that the uptake and translocation of HFRs by plants were selective, with lower halogenated congeners prone to accumulation in vegetable tissues. Positive relationships between PBDEs and their substitutes were observed in vegetable tissues, suggesting that the replacement of PBDEs by NBFRs has not resulted in an obvious transition in plants within the study area.

  15. A partition-limited model for the plant uptake of organic contaminants from soil and water

    USGS Publications Warehouse

    Chiou, C.T.; Sheng, G.; Manes, M.

    2001-01-01

    In dealing with the passive transport of organic contaminants from soils to plants (including crops), a partition-limited model is proposed in which (i) the maximum (equilibrium) concentration of a contaminant in any location in the plant is determined by partition equilibrium with its concentration in the soil interstitial water, which in turn is determined essentially by the concentration in the soil organic matter (SOM) and (ii) the extent of approach to partition equilibrium, as measured by the ratio of the contaminant concentrations in plant water and soil interstitial water, ??pt (??? 1), depends on the transport rate of the contaminant in soil water into the plant and the volume of soil water solution that is required for the plant contaminant level to reach equilibrium with the external soil-water phase. Through reasonable estimates of plant organic-water compositions and of contaminant partition coefficients with various plant components, the model accounts for calculated values of ??pt in several published crop-contamination studies, including near-equilibrium values (i.e., ??pt ??? 1) for relatively water-soluble contaminants and lower values for much less soluble contaminants; the differences are attributed to the much higher partition coefficients of the less soluble compounds between plant lipids and plant water, which necessitates much larger volumes of the plant water transport for achieving the equilibrium capacities. The model analysis indicates that for plants with high water contents the plant-water phase acts as the major reservoir for highly water-soluble contaminants. By contrast, the lipid in a plant, even at small amounts, is usually the major reservoir for highly water-insoluble contaminants.

  16. Phytozome: a Tool for Green Plant Comparative Genomics

    DOE Data Explorer

    Phytozome is a joint project of the Department of Energy's Joint Genome Institute and the Center for Integrative Genomics to facilitate comparative genomic studies amongst green plants. Clusters of orthologous and paralogous genes that represent the modern descendents of ancestral gene sets are constructed at key phylogenetic nodes. These clusters allow easy access to clade specific orthology/paralogy relationships as well as clade specific genes and gene expansions. As of release v4.0, Phytozome provides access to nine sequenced and annotated green plant genomes, eight of which have been clustered into gene families at six evolutionarily significant nodes. Where possible, each gene has been annotated with PFAM, KOG, KEGG, and PANTHER assignments, and publicly available annotations from RefSeq, UniProt, TAIR, JGI are hyper-linked and searchable. [Copied from the Overview at http://www.phytozome.net/Phytozome_info.php

  17. Comparative Patterns of Plant Invasions in the Mediterranean Biome

    PubMed Central

    Arianoutsou, Margarita; Delipetrou, Pinelopi; Vilà, Montserrat; Dimitrakopoulos, Panayiotis G.; Celesti-Grapow, Laura; Wardell-Johnson, Grant; Henderson, Lesley; Fuentes, Nicol; Ugarte-Mendes, Eduardo; Rundel, Philip W.

    2013-01-01

    The objective of this work was to compare and contrast the patterns of alien plant invasions in the world’s five mediterranean-climate regions (MCRs). We expected landscape age and disturbance history to have bearing on levels of invasion. We assembled a database on naturalized alien plant taxa occurring in natural and semi-natural terrestrial habitats of all five regions (specifically Spain, Italy, Greece and Cyprus from the Mediterranean Basin, California, central Chile, the Cape Region of South Africa and Southwestern - SW Australia). We used multivariate (hierarchical clustering and NMDS ordination) trait and habitat analysis to compare characteristics of regions, taxa and habitats across the mediterranean biome. Our database included 1627 naturalized species with an overall low taxonomic similarity among the five MCRs. Herbaceous perennials were the most frequent taxa, with SW Australia exhibiting both the highest numbers of naturalized species and the highest taxonomic similarity (homogenization) among habitats, and the Mediterranean Basin the lowest. Low stress and highly disturbed habitats had the highest frequency of invasion and homogenization in all regions, and high natural stress habitats the lowest, while taxonomic similarity was higher among different habitats in each region than among regions. Our analysis is the first to describe patterns of species characteristics and habitat vulnerability for a single biome. We have shown that a broad niche (i.e. more than one habitat) is typical of naturalized plant species, regardless of their geographical area of origin, leading to potential for high homogenization within each region. Habitats of the Mediterranean Basin are apparently the most resistant to plant invasion, possibly because their landscapes are generally of relatively recent origin, but with a more gradual exposure to human intervention over a longer period. PMID:24244443

  18. Uptake, translocation, and transformation of pentachlorophenol in soybean and spinach plants

    SciTech Connect

    Casterline, J.L. Jr.; Barnett, N.M.; Ku, Y.

    1985-06-01

    Soybean plants were grown for 90 days and spinach plants for 64 days in a mixture of sterilized greenhouse soil and sand containing 10 ppm pentachlorophenol. All plant parts and soil samples were extracted and separated into nonpolar and polar fractions. Major nonpolar and polar metabolites were identified by gas-liquid chromatography and mass spectrometry. Nonpolar fractions from both soybean and spinach plants were found to contain pentachlorophenol and its metabolites, 2,3,4,6-tetrachlorophenol, methoxytetrachlorophenol, 2,3,4,6-tetrachloroanisole, and pentachloroanisole. Cleavage of polar metabolites from the soybean plants by acid hydrolysis yielded organic solvent-extractable products. These products were identified as pentachlorophenol, 2,3,4,6-tetrachlorophenol, and methoxytetrachlorophenol. Cleavage of polar materials from spinach plants yielded only pentachlorophenol. The polar metabolites from the soybean plants were also subjected to enzymatic cleavage by beta-glucosidase. The conjugates consisted mostly of O-glucosides of the same metabolites released by acid hydrolysis. Failure of hydrolysis by aryl sulfatase indicated that very little or no sulfates were present. The metabolites found in the plants were not detected in soil samples obtained from pots immediately after the plants were harvested.

  19. Uptake of NO, NO 2 and O 3 by sunflower ( Helianthus annuus L.) and tobacco plants ( Nicotiana tabacum L.): dependence on stomatal conductivity

    NASA Astrophysics Data System (ADS)

    Neubert, A.; Kley, D.; Wildt, J.; Segschneider, H. J.; Förstel, H.

    The uptake of NO, NO 2 and O 3 by sunflowers ( Helianthus annuus L. var. giganteus) and tobacco plants ( Nicotiana tabacum L. var. Bel W3), using concentrations representative for moderately polluted air, has been determined by gas exchange experiments. Conductivities for these trace gases were measured at different light fluxes ranging from 820 μEm -2s -1 to darkness. The conductivities to water vapor and the trace gases are highly correlated. It is concluded that the uptake of NO, NO 2 and O 3 by sunflowers and tobacco plants is linearly dependent on stomatal opening. While the uptake of NO is limited by the mesophyll resistance, the uptake of NO 2 is only by diffusion through the stomata. Loss processes by deposition to the leaf surfaces are more pronounced for O 3 than for NO and NO 2.

  20. Root-Uptake of C-14 Acetic Acid by Various Plants and C-14 Dynamics Surrounding the Experimental Tessera

    SciTech Connect

    Ogiyama, S.; Takeda, H.; Uchida, S.; Suzuki, H.; Inubushi, K.

    2008-07-01

    Carbon-14 (C-14, t{sub 1/2} = 5.73x10{sup 3} yrs) from radioactive waste is one of the most important radioactive nuclides for environmental assessment in the context of geological disposal, and understanding the transfer of radioactive elements to plants is essential for public health safety. In order to obtain fundamental knowledge, culture experiments using marigold (Tagetes patula L.), tall fescue (Festuca arundinacea S.), paddy rice (Oryza sativa L.), radish (Raphanus sativus L.), and carrot (Daucus carota L.) plants were conducted to examine root-uptake and dynamics of C-14 in the laboratory. The C-14 radioactivity in each plant part (e.g. shoot, root, edible part, etc.), medium (e.g. culture solution, sand, etc.), and air was determined. The distribution of C-14 in the plants was visualized using autoradiography. For a comparison, autoradiography was also done using Na-22. Results of the present study indicated that C-14 labeled CO{sub 2} gas was released from the culture solution to the atmosphere. Clear autoradiography images were observed in plants for the shoots and lower roots which were soaked in the culture solution. The upper roots which were not soaked in the culture solution were not clearly imaged. In the radiotracer experiment using Na-22, a clear image was observed for the whole carrot seedling, even including the upper root, on the autoradiography. However, the amounts of C-14 acetic acid absorbed by all the plants through their roots were considered to be very small. Inorganic carbon transformed from C-14 acetic acid would be taken up by plants through the roots, and some fraction of C-14 would be assimilated into the shoots by photosynthesis. (authors)

  1. Cadmium Sorption Characteristics of Soil Amendments and its Relationship with the Cadmium Uptake by Hyperaccumulator and Normal Plants in Amended Soils

    PubMed Central

    Sun, Yan; Wu, Qi-Tang; Lee, Charles C.C.; Li, Baoqin; Long, Xinxian

    2013-01-01

    In order to select appropriate amendments for cropping hyperaccumulator or normal plants on contaminated soils and establish the relationship between Cd sorption characteristics of soil amendments and their capacity to reduce Cd uptake by plants, batch sorption experiments with 11 different clay minerals and organic materials and a pot experiment with the same amendments were carried out. The pot experiment was conducted with Sedum alfredii and maize (Zea mays) in a co-cropping system. The results showed that the highest sorption amount was by montmorillonite at 40.82 mg/g, while mica was the lowest at only 1.83 mg/g. There was a significant negative correlation between the n value of Freundlich equation and Cd uptake by plants, and between the logarithm of the stability constant K of the Langmuir equation and plant uptake. Humic acids (HAs) and mushroom manure increased Cd uptake by S. alfredii, but not maize, thus they are suitable as soil amendments for the co-cropping S. alfredii and maize. The stability constant K in these cases was 0.14–0.16 L/mg and n values were 1.51–2.19. The alkaline zeolite and mica had the best fixation abilities and significantly decreased Cd uptake by the both plants, with K ≥ 1.49 L/mg and n ≥ 3.59. PMID:24912231

  2. Cadmium sorption characteristics of soil amendments and its relationship with the cadmium uptake by hyperaccumulator and normal plants in amended soils.

    PubMed

    Sun, Yan; Wu, Qi-Tang; Lee, Charles C C; Li, Baoqin; Long, Xinxian

    2014-01-01

    In order to select appropriate amendments for cropping hyperaccumulator or normal plants on contaminated soils and establish the relationship between Cd sorption characteristics of soil amendments and their capacity to reduce Cd uptake by plants, batch sorption experiments with 11 different clay minerals and organic materials and a pot experiment with the same amendments were carried out. The pot experiment was conducted with Sedum alfredii and maize (Zea mays) in a co-cropping system. The results showed that the highest sorption amount was by montmorillonite at 40.82 mg/g, while mica was the lowest at only 1.83 mg/g. There was a significant negative correlation between the n value of Freundlich equation and Cd uptake by plants, and between the logarithm of the stability constant K of the Langmuir equation and plant uptake. Humic acids (HAs) and mushroom manure increased Cd uptake by S. alfredii, but not maize, thus they are suitable as soil amendments for the co-cropping S. alfredii and maize. The stability constant K in these cases was 0.14-0.16 L/mg and n values were 1.51-2.19. The alkaline zeolite and mica had the best fixation abilities and significantly decreased Cd uptake by the both plants, with K > or = 1.49 L/mg and n > or = 3.59. PMID:24912231

  3. Cadmium sorption characteristics of soil amendments and its relationship with the cadmium uptake by hyperaccumulator and normal plants in amended soils.

    PubMed

    Sun, Yan; Wu, Qi-Tang; Lee, Charles C C; Li, Baoqin; Long, Xinxian

    2014-01-01

    In order to select appropriate amendments for cropping hyperaccumulator or normal plants on contaminated soils and establish the relationship between Cd sorption characteristics of soil amendments and their capacity to reduce Cd uptake by plants, batch sorption experiments with 11 different clay minerals and organic materials and a pot experiment with the same amendments were carried out. The pot experiment was conducted with Sedum alfredii and maize (Zea mays) in a co-cropping system. The results showed that the highest sorption amount was by montmorillonite at 40.82 mg/g, while mica was the lowest at only 1.83 mg/g. There was a significant negative correlation between the n value of Freundlich equation and Cd uptake by plants, and between the logarithm of the stability constant K of the Langmuir equation and plant uptake. Humic acids (HAs) and mushroom manure increased Cd uptake by S. alfredii, but not maize, thus they are suitable as soil amendments for the co-cropping S. alfredii and maize. The stability constant K in these cases was 0.14-0.16 L/mg and n values were 1.51-2.19. The alkaline zeolite and mica had the best fixation abilities and significantly decreased Cd uptake by the both plants, with K > or = 1.49 L/mg and n > or = 3.59.

  4. Sustainable measures for sewage sludge treatment - evaluating the effects on P reaction in soils and plant P uptake

    NASA Astrophysics Data System (ADS)

    Shenker, Moshe; Einhoren, Hana

    2016-04-01

    Wastewater treatment, whether for water reusing or for releasing into the environment, results in sewage sludge rich in organic matter and nutrients. If free of pathogens and pollutants, this waste material is a widely used as soil amendment and source of valuable nutrients for agronomic use. Nevertheless, its P/N ratio largely exceeds plant P/N demand. Limiting its application rates according to the P demand of crops will largely limit its application rates and its beneficial effect as a soil amendment and as a source for other nutrients. An alternative approach, in which P is stabilized before application, was evaluated in this study. Anaerobically digested fresh sewage sludge (FSS) was stabilized by aluminum sulfate, ferrous sulfate, and calcium oxide (CaO), as well as by composting with shredded woody yard-waste to produce Al-FSS, Fe-FSS, CaO-FSS, and FSS-compost, respectively. Defined organic-P sources (glucose-1-phosphate and inositol-hexa-phosphate) and a P fertilizer (KH2PO4) were included as well and a control with no P amendments was included as a reference. Each material was applied at a fixed P load of 50 mg kg-1 to each of three soils and P speciation and plants P uptake were tested along 112 days of incubation at moderate (near field capacity) water content. Tomato seedlings were used for the P uptake test. The large set of data was used to evaluate the effect of each treatment on P reactions and mechanisms of retention in the tested soils and to correlate various P indices to P availability for plants. Plant P uptake was highly correlated to Olsen-P as well as to water-soluble inorganic-P, but not to water-soluble organic-P and not to total P or other experimentally-defined stable P fractions. We conclude that the P stabilization in the sludge will allow beneficial and sustainable use of sewage sludge as a soil amendment and source of nutrients, but the stabilization method should be selected in accordance with the target soil properties.

  5. Increased root oxygen uptake in pea plants responding to non-self neighbors.

    PubMed

    Meier, Ina Christin; Angert, Alon; Falik, Omer; Shelef, Oren; Rachmilevitch, Shimon

    2013-09-01

    Recent studies have demonstrated that plants alter root growth and decrease competition with roots of the same individual (self); however, the physiological traits accompanying this response are still widely unknown. In this study, we investigated the effect of root identity on gas exchange in the model species pea (Pisum sativum L.). Split-root plants were planted so that each pot contained either two roots of the same plant (self) or of two different plants (non-self), and the responses of biomass, photosynthesis, and respiration were measured. The photosynthetic rate was not affected by the identity of the root neighbor. We found a reduction of leaf dark respiration by half, accompanied by an increase in nocturnal root respiration by 29 % in plants neighboring with non-self. The activity of the alternative oxidase (AOX) pathway increased when plants responded to non-self neighbors. The increased activity of AOX in plants responding to non-self indicates carbon imbalances in roots, possibly as a consequence of increased root exudation and communication between individuals. If such an effect occurs more widely, it may change the assumptions made for the quantity of respiration as used in carbon budget models.

  6. Anomalous uptake and circulatory characteristics of the plant-based small RNA MIR2911

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Inconsistent detection of plant-based dietary small RNAs in circulation has thwarted the use of dietary RNA therapeutics. Here we demonstrate mice consuming diets rich in vegetables displayed enhanced serum levels of the plant specific small RNA MIR2911. Differential centrifugation, size-exclusion c...

  7. Uptake and partitioning of nutrients in blackberry and raspberry and evaluating plant nutrient status for accurate assessment of fertilizer requirements

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Raspberry and blackberry plantings have relatively low nutrient requirements compared to many other perennial fruit crops. Annual total N accumulation in the aboveground plant ranged from 69-122 kg/ha and 37-44 kg/ha in field-grown red raspberry and blackberry. Primocanes rely primarily on fertilize...

  8. Influence of compost on the mobility of arsenic in soil and its uptake by bean plants (Phaseolus vulgaris L.) irrigated with arsenite-contaminated water.

    PubMed

    Caporale, Antonio G; Pigna, Massimo; Sommella, Alessia; Dynes, James J; Cozzolino, Vincenza; Violante, Antonio

    2013-10-15

    The influence of compost on the growth of bean plants irrigated with As-contaminated waters and its influence on the mobility of As in the soils and the uptake of As (as NaAs(III)O2) by plant components was studied at various compost application rates (3·10(4) and 6·10(4) kg ha(-1)) and at three As concentrations (1, 2 and 3 mg kg(-1)). The biomass and As and P concentrations of the roots, shoots and beans were determined at harvest time, as well as the chlorophyll content of the leaves and nonspecific and specifically bound As in the soil. The bean plants exposed to As showed typical phytotoxicity symptoms; no plants however died over the study. The biomass of the bean plants increased with the increasing amounts of compost added to the soil, attributed to the phytonutritive capacity of compost. Biomass decreased with increasing As concentrations, however, the reduction in the biomass was significantly lower with the addition of compost, indicating that the As phytotoxicity was alleviated by the compost. For the same As concentration, the As content of the roots, shoots and beans decreased with increasing compost added compared to the Control. This is due to partial immobilization of the As by the organic functional groups on the compost, either directly or through cation bridging. Most of the As adsorbed by the bean plants accumulated in the roots, while a scant allocation of As occurred in the beans. Hence, the addition of compost to soils could be used as an effective means to limit As accumulation in crops from As-contaminated waters.

  9. Bioavailability of silver and silver sulfide nanoparticles to lettuce (Lactuca sativa): Effect of agricultural amendments on plant uptake.

    PubMed

    Doolette, Casey L; McLaughlin, Michael J; Kirby, Jason K; Navarro, Divina A

    2015-12-30

    Silver nanoparticles (AgNPs) can enter terrestrial systems as sulfidised AgNPs (Ag2S-NPs) through the application of biosolids to soil. However, the bioavailability of Ag2S-NPs in soils is unknown. The two aims of this study were to investigate (1) the bioavailability of Ag to lettuce (Lactuca sativa) using a soil amended with biosolids containing Ag2S-NPs and (2) the effect of commonly used agricultural fertilisers/amendments on the bioavailability of Ag, AgNPs and Ag2S-NPs to lettuce. The study used realistic AgNP exposure pathways and exposure concentrations. The plant uptake of Ag from biosolids-amended soil containing Ag2S-NPs was very low for all Ag treatments (0.02%). Ammonium thiosulfate and potassium chloride fertilisation significantly increased the Ag concentrations of plant roots and shoots. The extent of the effect varied depending on the type of Ag. Ag2S-NPs, the realistic form of AgNPs in soil, had the lowest bioavailability. The potential risk of AgNPs in soils is low; even in the plants that had the highest Ag concentrations (Ag(+)+thiosulfate), only 0.06% of added Ag was found in edible plant parts (shoots). Results from the study suggest that agricultural practises must be considered when carrying out risk assessments of AgNPs in terrestrial systems; such practises can affect AgNP bioavailability.

  10. Bioavailability of silver and silver sulfide nanoparticles to lettuce (Lactuca sativa): Effect of agricultural amendments on plant uptake.

    PubMed

    Doolette, Casey L; McLaughlin, Michael J; Kirby, Jason K; Navarro, Divina A

    2015-12-30

    Silver nanoparticles (AgNPs) can enter terrestrial systems as sulfidised AgNPs (Ag2S-NPs) through the application of biosolids to soil. However, the bioavailability of Ag2S-NPs in soils is unknown. The two aims of this study were to investigate (1) the bioavailability of Ag to lettuce (Lactuca sativa) using a soil amended with biosolids containing Ag2S-NPs and (2) the effect of commonly used agricultural fertilisers/amendments on the bioavailability of Ag, AgNPs and Ag2S-NPs to lettuce. The study used realistic AgNP exposure pathways and exposure concentrations. The plant uptake of Ag from biosolids-amended soil containing Ag2S-NPs was very low for all Ag treatments (0.02%). Ammonium thiosulfate and potassium chloride fertilisation significantly increased the Ag concentrations of plant roots and shoots. The extent of the effect varied depending on the type of Ag. Ag2S-NPs, the realistic form of AgNPs in soil, had the lowest bioavailability. The potential risk of AgNPs in soils is low; even in the plants that had the highest Ag concentrations (Ag(+)+thiosulfate), only 0.06% of added Ag was found in edible plant parts (shoots). Results from the study suggest that agricultural practises must be considered when carrying out risk assessments of AgNPs in terrestrial systems; such practises can affect AgNP bioavailability. PMID:26322966

  11. Cadmium, lead, and zinc mobility and plant uptake in a mine soil amended with sugarcane straw biochar.

    PubMed

    Puga, A P; Abreu, C A; Melo, L C A; Paz-Ferreiro, J; Beesley, L

    2015-11-01

    Accumulation of heavy metals in unconsolidated soils can prove toxic to proximal environments, if measures are not taken to stabilize soils. One way to minimize the toxicity of metals in soils is the use of materials capable of immobilizing these contaminants by sorption. Biochar (BC) can retain large amounts of heavy metals due to, among other characteristics, its large surface area. In the current experiment, sugarcane-straw-derived biochar, produced at 700 °C, was applied to a heavy-metal-contaminated mine soil at 1.5, 3.0, and 5.0% (w/w). Jack bean and Mucuna aterrima were grown in pots containing a mine contaminated soil and soil mixed with BC. Pore water was sampled to assess the effects of biochar on zinc solubility, while soils were analyzed by DTPA extraction to confirm available metal concentrations. The application of BC decreased the available concentrations of Cd, Pb, and Zn in the mine contaminated soil leading to a consistent reduction in the concentration of Zn in the pore water. Amendment with BC reduced plant uptake of Cd, Pb, and Zn with the jack bean uptaking higher amounts of Cd and Pb than M. aterrima. This study indicates that biochar application during mine soil remediation could reduce plant concentrations of heavy metals. Coupled with this, symptoms of heavy metal toxicity were absent only in plants growing in pots amended with biochar. The reduction in metal bioavailability and other modifications to the substrate induced by the application of biochar may be beneficial to the establishment of a green cover on top of mine soil to aid remediation and reduce risks.

  12. Plant uptake, translocation, and return o