Altitudinal characteristics of atmospheric deposition of aerosols in mountainous regions: Lessons from the Fukushima Daiichi Nuclear Power Station accident.

PubMed

Sanada, Yukihisa; Katata, Genki; Kaneyasu, Naoki; Nakanishi, Chika; Urabe, Yoshimi; Nishizawa, Yukiyasu

2018-03-15

To understand the formation process of radiologically contaminated areas in eastern Japan caused by the Fukushima Daiichi Nuclear Power Station (FDNPS) accident, the deposition mechanisms over complex topography are the key factors to be investigated. To characterize the atmospheric deposition processes of radionuclides over complex mountainous topography, we investigated the altitudinal distributions of the radiocesium deposited during the accident. In five selected areas, altitudinal characteristics of the air dose rates observed using airborne surveys were analyzed. To examine the deposition mechanisms, we supplementarily used vertical profiles of radiocesium deposition in each area calculated in the latest atmospheric dispersion model. In southern Iwate, the vertical profile of the observed air dose rate was uniform regardless of altitude. In western Tochigi, the areas with the highest levels of contamination were characteristically distributed in the middle of the mountains, while in southern Fukushima, the areas with the highest contamination levels were enhanced near the summits of mountains. In central Fukushima, high air dose rates were limited to the bottoms of basin-like valley. In the region northwest of FDNPS, the air dose rate was the highest at the bottom of valley topography and decreased gradually with altitude. The simulation results showed that calculated wet deposition and observed vertical profiles of total deposition were similar in areas of southern Iwate and northwest of FDNPS qualitatively, suggesting that the dominant deposition mechanism was wet deposition. In contrast, the atmospheric dispersion model failed to reproduce either the timing of precipitation events or vertical profiles of radiocesium deposition in three other areas. Although it was difficult to elucidate the deposition mechanisms in these areas due to uncertainties of the present model results, potential mechanisms such as cloud water deposition were still proposed based on circumstantial evidences of limited meteorological data during the early stage of the accident. Copyright © 2017 Elsevier B.V. All rights reserved.

Complex carbonate and clastic stratigraphy of the inner shelf off west-central Florida

DOE Office of Scientific and Technical Information (OSTI.GOV)

Locker, S.D.; Doyle, L.J.; Hine, A.C.

1990-05-01

The near surface stratigraphy (< 30 m) of the inner shelf off the west coast of Florida was investigated using high-resolution seismic, side-scan sonar, and continuous underwater video camera coverage. The simultaneous operation of all three systems provided a unique opportunity to calibrate acoustic data with actual video images of the sea floor in a geologically complex area characterized by limestone dissolution structures, hard-bottom exposures, and overlain by a limited supply of terrigenous clastics. Three principle bottom types, grass, sand, and hard-bottom mapped using video and side-scan sonographs, show a correlation with two subsurface stratigraphic zones. The nearshore subsurface zonemore » extending to 6-7 m water depth is characterized by flat or rolling strata and sinkholes that increase in size (200-1,200 m in diameter) and become more numerous further offshore. This zone is truncated by a major erosional unconformity overlain by a thin (<3 m) sequence of Holocene sediment, which together form a terrace upon which the Anclote Key barrier island formed. The offshore subsurface zone (7-11 m water depth) exhibits irregular and discontinuous high-amplitude flat or inclined reflections and few sinkholes. Offshore, extensive hard-bottom exposures are common with discontinuous sediment that occur as lenses or sand waves. The complex stratigraphy of the west Florida shelf includes outcropping Neogene limestones that have undergone dissolution during sea level lowstands. Carbonates and clastics dispersed during multiple sea level changes overlie the Neogene limestones. Dissolution styles and erosional unconformities produced bedrock topography and now control modern geological and biological processes.« less

Contribution of topographically generated submesoscale turbulence to Southern Ocean overturning

NASA Astrophysics Data System (ADS)

Ruan, Xiaozhou; Thompson, Andrew F.; Flexas, Mar M.; Sprintall, Janet

2017-11-01

The ocean's global overturning circulation regulates the transport and storage of heat, carbon and nutrients. Upwelling across the Southern Ocean's Antarctic Circumpolar Current and into the mixed layer, coupled to water mass modification by surface buoyancy forcing, has been highlighted as a key process in the closure of the overturning circulation. Here, using twelve high-resolution hydrographic sections in southern Drake Passage, collected with autonomous ocean gliders, we show that Circumpolar Deep Water originating from the North Atlantic, known as Lower Circumpolar Deep Water, intersects sloping topography in narrow and strong boundary currents. Observations of strong lateral buoyancy gradients, enhanced bottom turbulence, thick bottom mixed layers and modified water masses are consistent with growing evidence that topographically generated submesoscale flows over continental slopes enhance near-bottom mixing, and that cross-density upwelling occurs preferentially over sloping topography. Interactions between narrow frontal currents and topography occur elsewhere along the path of the Antarctic Circumpolar Current, which leads us to propose that such interactions contribute significantly to the closure of the overturning in the Southern Ocean.

ARC-1989-A89-7025

NASA Image and Video Library

1989-08-24

P-34687 Range : 530,000 km. ( 330,000 miles ) Smallest Resolvable Feature : 10 km or 6 miles This Voyager 2 image of Neptune's satellite Triton shows the first photo of Triton to reveal surface topography. The south pole, continuously illuminated by sunlight at this season, ia at bottom left. the boundary between bright southern hemisphere and the darker and the darker, northern hemisphere is clearly visible. Both the darker regions to the north and the very bright sub-equatorial band show a complex pattern of irregular topography that somewhat resembles 'fretted terrain' on parts of Venus and Mars. The pattern of dark and light regions over most of the southern hemisphere will require higher resolution images for interpretation. Also evident are long, straight lines that appear to be surface expressions of internal, tectonic processes. No large impact ctaters are visible, suggesting that the crust of Triton has been renewed relatively recently, that is, within the last bllion years or less.

Eddy Effects in the General Circulation, Spanning Mean Currents, Mesoscale Eddies, and Topographic Generation, Including Submesoscale Nests

DTIC Science & Technology

2013-09-30

bottom form stress (pressure force) and bottom boundary layers – all the aspects associated with turbulent flows over steep topography in the presence of...filaments, and eddies; topographic current separation, form stress , and submesoscale vortex generation; Our work on isoneutral diffusion for tracers...Bump region, are due to the contribution of the bottom stress curl. Fig. 4 shows how the Gulf Stream path is directly linked to the Bottom Pressure

Geoid Anomalies and Dynamic Topography from Time Dependent, Spherical Axisymmetric Mantle Convection

NASA Technical Reports Server (NTRS)

Kiefer, Walter S.; Kellogg, Louise H.

1998-01-01

Geoid anomalies and dynamic topography are two important diagnostics of mantle convection. We present geoid and topography results for several time-dependent convection models in spherical axisymmetric geometry for Rayleigh numbers between 10(exp 6) and 10(exp 7) with depth-dependent viscosity and mixtures of bottom and internal heating. The models are strongly chaotic, with boundary layer instabilities erupting out of both thermal boundary layers. In some instances, instabilities from one boundary layer influence the development of instabilities in the other boundary layer. Such coupling between events at the top and bottom of the mantle has been suggested to play a role in a mid-Cretaceous episode of enhanced volcanism in the Pacific. These boundary layer instabilities produce large temporal variations in the geoid anomalies and dynamic nd to the topography associated with the convection. The amplitudes of these fluctuations depend on the detailed model parameter,.% it of this but fluctuations of 30-50% relative to the time-averaged geoid and topography are common. The convective planform is strongly sensitive to the specific initial conditions. Convection cells with larger aspect ratio tend to have larger fractional fluctuations in their geoid and topography amplitudes, because boundary layer instabilities have more time to develop in long cells. In some instances, we observe low-amplitude topographic highs adjacent to the topographic lows produced by cold downwellings. We discuss applications of these results to several situations, including the temporal variability of m basis. hotspots such as Hawaii, the topography of subduction zone outer rises, and the topography of coronae on Venus.

Jupiter's Great Red Spot as a shallow water system

NASA Technical Reports Server (NTRS)

Dowling, Timothy E.; Ingersoll, Andrew P.

1989-01-01

Voyager cloud-top velocity data for Jupiter's Great Red Spot (GRS) is used to derive the bottom topography up to a constant that depends on the unknown radius of deformation. The bottom topography is inferred from the Bernoulli streamfunction, kinetic energy per unit mass, and absolute vorticity values derived from the velocity data. The results are used to calculate potential vorticity versus latitude far from the vortex. It is found that the deep atmosphere is in differential motion and that the far-field potential vorticity gradient changes sign at several latitudes. Numerical experiments are conducted to study the time-dependent behavior of the shallow water analog of Jupiter's analog.

A three dimensional Dirichlet-to-Neumann map for surface waves over topography

NASA Astrophysics Data System (ADS)

Nachbin, Andre; Andrade, David

2016-11-01

We consider three dimensional surface water waves in the potential theory regime. The bottom topography can have a quite general profile. In the case of linear waves the Dirichlet-to-Neumann operator is formulated in a matrix decomposition form. Computational simulations illustrate the performance of the method. Two dimensional periodic bottom variations are considered in both the Bragg resonance regime as well as the rapidly varying (homogenized) regime. In the three-dimensional case we use the Luneburg lens-shaped submerged mound, which promotes the focusing of the underlying rays. FAPERJ Cientistas do Nosso Estado Grant 102917/2011 and ANP/PRH-32.

Summary of Skylab S-193 altimeter altitude results. [orbit calculation and studies of the ocean bottom

NASA Technical Reports Server (NTRS)

Mcgoogan, J. T.; Leitao, C. D.; Wells, W. T.

1975-01-01

The SKYLAB S-193 altimeter altitude results are presented in a concise format for further use and analysis by the scientific community. The altimeter mission and instrumentation is described along with the altimeter processing techniques and values of parameters used for processing. The determination of reference orbits is discussed, and the tracking systems utilized are tabulated. Techniques for determining satellite pointing are presented and a tabulation of pointing for each data mission included. The geographical location, the ocean bottom topography, the altimeter-determined ocean surface topography, and the altimeter automatic gain control history is presented. Some typical applications of this data are suggested.

Experimental and theoretical modelling of sand-water-object interaction under nonlinear progressive waves

NASA Astrophysics Data System (ADS)

Testik, Firat Yener

An experimental and theoretical study has been conducted to obtain a fundamental understanding of the dynamics of the sand, water and a solid object interaction as progressive gravity waves impinge on a sloping beach. Aside from obvious scientific interest, this exceedingly complex physical problem is important for naval applications, related to the behavior of disk/cylindrical shaped objects (mines) in the coastal waters. To address this problem, it was divided into a set of simpler basic problems. To begin, nonlinear progressive waves were investigated experimentally in a wave tank for the case of a rigid (impermeable) sloping bottom. Parameterizations for wave characteristics were proposed and compared with the experiments. In parallel, a numerical wave tank model (NWT) was calibrated using experimental data from a single run, and wave field in the wave tank was simulated numerically for the selected experiments. Subsequently, a layer of sand was placed on the slope and bottom topography evolution processes (ripple and sandbar dynamics, bottom topography relaxation under variable wave forcing, etc.) were investigated experimentally. Models for those processes were developed and verified by experimental measurements. Flow over a circular cylinder placed horizontally on a plane wall was also studied. The far-flow field of the cylinder placed in the wave tank was investigated experimentally and numerical results from the NWT simulations were compared with the experimental data. In the mean time, the near-flow velocity/vorticity field around a short cylinder under steady and oscillatory flow was studied in a towing tank. Horseshoe vortex formation and periodic shedding were documented and explained. With the understanding gained through the aforementioned studies, dynamics and burial/scour around the bottom objects in the wave tank were studied. Possible scenarios on the behavior of the disk-shaped objects were identified and explained. Scour around 3D cylindrical objects was investigated. Different scour regimes were identified experimentally and explained theoretically. Proper physical parameterizations on the time evolution and equilibrium scour characteristics were proposed and verified experimentally.

High-resolution modeling of a marine ecosystem using the FRESCO hydroecological model

NASA Astrophysics Data System (ADS)

Zalesny, V. B.; Tamsalu, R.

2009-02-01

The FRESCO (Finnish Russian Estonian Cooperation) mathematical model describing a marine hydroecosystem is presented. The methodology of the numerical solution is based on the method of multicomponent splitting into physical and biological processes, spatial coordinates, etc. The model is used for the reproduction of physical and biological processes proceeding in the Baltic Sea. Numerical experiments are performed with different spatial resolutions for four marine basins that are enclosed into one another: the Baltic Sea, the Gulf of Finland, the Tallinn-Helsinki water area, and Tallinn Bay. Physical processes are described by the equations of nonhydrostatic dynamics, including the k-ω parametrization of turbulence. Biological processes are described by the three-dimensional equations of an aquatic ecosystem with the use of a size-dependent parametrization of biochemical reactions. The main goal of this study is to illustrate the efficiency of the developed numerical technique and to demonstrate the importance of a high spatial resolution for water basins that have complex bottom topography, such as the Baltic Sea. Detailed information about the atmospheric forcing, bottom topography, and coastline is very important for the description of coastal dynamics and specific features of a marine ecosystem. Experiments show that the spatial inhomogeneity of hydroecosystem fields is caused by the combined effect of upwelling, turbulent mixing, surface-wave breaking, and temperature variations, which affect biochemical reactions.

Modeling of SAR signatures of shallow water ocean topography

NASA Technical Reports Server (NTRS)

Shuchman, R. A.; Kozma, A.; Kasischke, E. S.; Lyzenga, D. R.

1984-01-01

A hydrodynamic/electromagnetic model was developed to explain and quantify the relationship between the SEASAT synthetic aperture radar (SAR) observed signatures and the bottom topography of the ocean in the English Channel region of the North Sea. The model uses environmental data and radar system parameters as inputs and predicts SAR-observed backscatter changes over topographic changes in the ocean floor. The model results compare favorably with the actual SEASAT SAR observed backscatter values. The developed model is valid for only relatively shallow water areas (i.e., less than 50 meters in depth) and suggests that for bottom features to be visible on SAR imagery, a moderate to high velocity current and a moderate wind must be present.

A kinetic flux vector splitting scheme for shallow water equations incorporating variable bottom topography and horizontal temperature gradients.

PubMed

Saleem, M Rehan; Ashraf, Waqas; Zia, Saqib; Ali, Ishtiaq; Qamar, Shamsul

2018-01-01

This paper is concerned with the derivation of a well-balanced kinetic scheme to approximate a shallow flow model incorporating non-flat bottom topography and horizontal temperature gradients. The considered model equations, also called as Ripa system, are the non-homogeneous shallow water equations considering temperature gradients and non-uniform bottom topography. Due to the presence of temperature gradient terms, the steady state at rest is of primary interest from the physical point of view. However, capturing of this steady state is a challenging task for the applied numerical methods. The proposed well-balanced kinetic flux vector splitting (KFVS) scheme is non-oscillatory and second order accurate. The second order accuracy of the scheme is obtained by considering a MUSCL-type initial reconstruction and Runge-Kutta time stepping method. The scheme is applied to solve the model equations in one and two space dimensions. Several numerical case studies are carried out to validate the proposed numerical algorithm. The numerical results obtained are compared with those of staggered central NT scheme. The results obtained are also in good agreement with the recently published results in the literature, verifying the potential, efficiency, accuracy and robustness of the suggested numerical scheme.

A kinetic flux vector splitting scheme for shallow water equations incorporating variable bottom topography and horizontal temperature gradients

PubMed Central

2018-01-01

This paper is concerned with the derivation of a well-balanced kinetic scheme to approximate a shallow flow model incorporating non-flat bottom topography and horizontal temperature gradients. The considered model equations, also called as Ripa system, are the non-homogeneous shallow water equations considering temperature gradients and non-uniform bottom topography. Due to the presence of temperature gradient terms, the steady state at rest is of primary interest from the physical point of view. However, capturing of this steady state is a challenging task for the applied numerical methods. The proposed well-balanced kinetic flux vector splitting (KFVS) scheme is non-oscillatory and second order accurate. The second order accuracy of the scheme is obtained by considering a MUSCL-type initial reconstruction and Runge-Kutta time stepping method. The scheme is applied to solve the model equations in one and two space dimensions. Several numerical case studies are carried out to validate the proposed numerical algorithm. The numerical results obtained are compared with those of staggered central NT scheme. The results obtained are also in good agreement with the recently published results in the literature, verifying the potential, efficiency, accuracy and robustness of the suggested numerical scheme. PMID:29851978

Algorithms used in the Airborne Lidar Processing System (ALPS)

USGS Publications Warehouse

Nagle, David B.; Wright, C. Wayne

2016-05-23

The Airborne Lidar Processing System (ALPS) analyzes Experimental Advanced Airborne Research Lidar (EAARL) data—digitized laser-return waveforms, position, and attitude data—to derive point clouds of target surfaces. A full-waveform airborne lidar system, the EAARL seamlessly and simultaneously collects mixed environment data, including submerged, sub-aerial bare earth, and vegetation-covered topographies.ALPS uses three waveform target-detection algorithms to determine target positions within a given waveform: centroid analysis, leading edge detection, and bottom detection using water-column backscatter modeling. The centroid analysis algorithm detects opaque hard surfaces. The leading edge algorithm detects topography beneath vegetation and shallow, submerged topography. The bottom detection algorithm uses water-column backscatter modeling for deeper submerged topography in turbid water.The report describes slant range calculations and explains how ALPS uses laser range and orientation measurements to project measurement points into the Universal Transverse Mercator coordinate system. Parameters used for coordinate transformations in ALPS are described, as are Interactive Data Language-based methods for gridding EAARL point cloud data to derive digital elevation models. Noise reduction in point clouds through use of a random consensus filter is explained, and detailed pseudocode, mathematical equations, and Yorick source code accompany the report.

Sun glitter imaging of submarine sand waves on the Taiwan Banks: Determination of the relaxation rate of short waves

NASA Astrophysics Data System (ADS)

Shao, Hao; Li, Yan; Li, Li

2011-06-01

Above sand waves on the seafloor, surface short waves, which are responsible for the radiance distribution in remote sensing imagery, are modulated gradually by the submarine topography. The relaxation rate μr characterizes the rate at which the short waves reach their saturation range after being disturbed. It is a key parameter in the weak hydrodynamic interaction theory and is also a most important parameter in the imaging mechanism used for mapping submarine bottom topography. In this study, a robust expression containing intensity and phase (advection effect) modulations of the perturbed action spectrum of short waves was deduced, by using the first-order weak hydrodynamic interaction theory. On the basis of the phase modulation, a method was developed to determine the relaxation rate in the Sun glitter imaging mechanism. The relaxation rates were estimated using in situ data measured on a cruise over the sand waves of the Taiwan Banks, a sea area between the East China Sea and the South China Sea, on 28-29 August 2006. Results showed that, under a wind speed of 5.0 m s-1, the relaxation rate of short waves was about 0.055 s-1 in response to current variations and about 0.025 s-1 equivalently in response to sea bottom topographic variations. The former value could be applied to interpret the amplitude of submarine topography by using satellite imagery, while the latter one (equivalent relaxation rate μ'r) could help to more accurately calibrate the spatial position of the retrieved sea bottom topography.

Analytical solution for the wind-driven circulation in a lake containing an island

NASA Technical Reports Server (NTRS)

Goldstein, M. E.; Gedney, R. T.

1971-01-01

An analysis was carried out to determine analytically the effect of an island on the wind driven currents in a shallow lake (or sea). A general analysis is developed that can be applied to a large class of lake and island geometries and bottom topographies. Detailed numerical results are obtained for a circular island located eccentrically or concentrically in a circular lake with a logarithmic bottom topography. It is shown that an island can produce volume flow (vertically integrated velocities) gyres that are completely different from those produced by a normal basin without an island. These gyres in the neighborhood of the island will produce different velocity patterns, which include the acceleration of flow near the island shore.

Long-term observations of bottom conditions and sediment movement on the Atlantic continental shelf; time-lapse photography from instrumented tripod

USGS Publications Warehouse

Butman, Bradford; Bryden, Cynthia G.; Pfirman, Stephanie L.; Strahle, William J.; Noble, Marlene A.

1984-01-01

An instrument system that measures bottom current, temperature, light transmission, and pressure, and that photographs the bottom at 2- to 6-hour intervals has been developed to study sediment transport on the Atlantic Continental Shelf. Instruments have been deployed extensively along the United States East Coast Continental Shelf for periods of from 2 to 6 months to study the frequency, direction, and rate of bottom sediment movement, and the processes causing movement. The time-lapse photographs are used to (1) characterize the bottom benthic community and surface microtopography; (2) monitor changes in the bottom topography and near-bottom water column caused by currents and storms (for example, ripple generation and migration, sediment resuspension); and (3) monitor seasonal changes in the bottom benthic community and qualitative effects of this community on the bottom sediments.

Benefits and shortcomings of non-destructive benthic imagery for monitoring hard-bottom habitats.

PubMed

Beisiegel, Kolja; Darr, Alexander; Gogina, Mayya; Zettler, Michael L

2017-08-15

Hard-bottom habitats with complex topography and fragile epibenthic communities are still not adequately considered in benthic monitoring programs, despite their potential ecological importance. While indicators of ecosystem health are defined by major EU directives, methods commonly used to measure them are deficient in quantification of biota on hard surfaces. We address the suitability of seafloor imaging for monitoring activities. We compared the ability of high-resolution imagery and physical sampling methods (grab, dredge, SCUBA-diving) to detect taxonomic and functional components of epibenthos. Results reveal that (1) with minimal habitat disturbance on large spatial scales, imagery provides valuable, cost-effective assessment of rocky reef habitat features and community structure, (2) despite poor taxonomic resolution, image-derived data for habitat-forming taxa might be sufficient to infer richness of small sessile and mobile fauna, (3) physical collections are necessary to develop a robust record of species richness, including species-level taxonomic identifications, and to establish a baseline. Copyright © 2017. Published by Elsevier Ltd.

An exact solution for effects of topography on free Rayleigh waves

USGS Publications Warehouse

Savage, W.Z.

2004-01-01

An exact solution for the effects of topography on Rayleigh wave amplification is presented. The solution is obtained by incorporating conformal mapping into complex-variable stress functions developed for free Rayleigh wave propagation in an elastic half-space with a flat upper surface. Results are presented for free Rayleigh wave propagation across isolated symmetric ridges and valleys. It is found for wavelengths that are comparable to ridge widths that horizontal Rayleigh wave amplitudes are amplified at ridge crests and that vertical amplitudes are strongly reduced near ridge crests relative to horizontal and vertical amplitudes of free Rayleigh waves in the flat case. Horizontal amplitudes are strongly deamplified at valley bottoms relative to those for the flat case for Rayleigh wavelengths comparable to valley widths. Wave amplitudes in the symmetric ridges and valleys asymptotically approach those for the flat case with increased wavelengths, increased ridge and valley widths, and with horizontal distance from and depth below the isolated ridges and valleys. Also, prograde particle motion is predicted near crests of narrow ridges and near the bottoms of narrow valleys. Finally, application of the theory at two sites known for topographic wave amplification gives a predicted surface wave amplification ratio of 3.80 at the ridge center for a frequency of 1.0 Hz at Robinwood Ridge in northern California and a predicted surface wave amplification ratio of 1.67 at the ridge center for the same frequency at the Cedar Hill Nursery site at Tarzana in southern California.

Flood regime as a driver of the distribution of mangrove and salt marsh species in a subtropical estuary

NASA Astrophysics Data System (ADS)

Spier, Daphne; Gerum, Humberto L. N.; Noernberg, Maurício A.; Lana, Paulo C.

2016-09-01

Tidal patterns of the subtropical Paranaguá Estuarine Complex, in southern Brazil, are strongly affected by episodic cold fronts and by the coastal geometry and bottom topography, resulting in high temporal variability and marked gradients in flood regime. We delimit tolerance ranges of submersion and exposure for representative plant and animal species from local mangroves and salt marshes, through a quantitative analysis of flooding patterns in three estuarine sectors. Our results are consistent with flood regime being the leading factor on how species are distributed over the intertidal flats of the PEC. Subleading factors might be related to salinity, sediment composition and nutrient flow.

The nonlinear effects of the eddy viscosity and the bottom friction on the Lagrangian residual velocity in a narrow model bay

NASA Astrophysics Data System (ADS)

Deng, Fangjing; Jiang, Wensheng; Feng, Shizuo

2017-09-01

The nonlinear effects of the eddy viscosity and the bottom friction on the Lagrangian residual velocity (LRV) are studied numerically in a narrow model bay. Three groups of the experiments with different eddy viscosity and different forms of the bottom friction are designed and are carried out in the three kinds of the topography. When the eddy viscosity is obtained from a two-equation turbulence closure model, the pattern of the LRV is more complex than that of the time invariant eddy viscosity case and the intensity is from more than 1.3 times to one order smaller than that of the linear eddy viscosity condition. The LRV are also acquired when the eddy viscosity varies from the flood-averaged one to the ebb-averaged one. It is found that when the flood-averaged eddy viscosity is bigger than the ebb-averaged eddy viscosity (flood-dominated asymmetry), the direction of the breadth-averaged LRV and the 3D LRV is nearly opposite to that when the eddy viscosity asymmetry is reverse (ebb-dominated asymmetry). However, the intensity of the LRV for the ebb-dominated case decreases toward the flood-dominated case as the ratio of the maximum depth in the deep channel and the minimum depth on the shoal increases. The different forms of the bottom friction also play a role in the LRV. The structures of the 3D LRV and the depth-integrated LRV are simpler, and the intensity of the LRV is two times smaller when the linear bottom friction is used than those when the quadratic bottom friction is used.

Multi-scale interactions between local hydrography, seabed topography, and community assembly on cold-water coral reefs

NASA Astrophysics Data System (ADS)

Henry, L.-A.; Moreno Navas, J.; Roberts, J. M.

2013-04-01

We investigated how interactions between hydrography, topography and species ecology influence the assembly of species and functional traits across multiple spatial scales of a cold-water coral reef seascape. In a novel approach for these ecosystems, we used a spatially resolved complex three-dimensional flow model of hydrography to help explain assembly patterns. Forward-selection of distance-based Moran's eigenvector mapping (dbMEM) variables identified two submodels of spatial scales at which communities change: broad-scale (across reef) and fine-scale (within reef). Variance partitioning identified bathymetric and hydrographic gradients important in creating broad-scale assembly of species and traits. In contrast, fine-scale assembly was related more to processes that created spatially autocorrelated patches of fauna, such as philopatric recruitment in sessile fauna, and social interactions and food supply in scavenging detritivores and mobile predators. Our study shows how habitat modification of reef connectivity and hydrography by bottom fishing and renewable energy installations could alter the structure and function of an entire cold-water coral reef seascape.

Dynamic topography and gravity anomalies for fluid layers whose viscosity varies exponentially with depth

NASA Technical Reports Server (NTRS)

Revenaugh, Justin; Parsons, Barry

1987-01-01

Adopting the formalism of Parsons and Daly (1983), analytical integral equations (Green's function integrals) are derived which relate gravity anomalies and dynamic boundary topography with temperature as a function of wavenumber for a fluid layer whose viscosity varies exponentially with depth. In the earth, such a viscosity profile may be found in the asthenosphere, where the large thermal gradient leads to exponential decrease of viscosity with depth, the effects of a pressure increase being small in comparison. It is shown that, when viscosity varies rapidly, topography kernels for both the surface and bottom boundaries (and hence the gravity kernel) are strongly affected at all wavelengths.

Impact of viscous boundary layers on the emission of lee-waves

NASA Astrophysics Data System (ADS)

Renaud, Antoine; Venaille, Antoine; Bouchet, Freddy

2017-04-01

Oceans large-scale structures such as jets and vortices can lose their energy into small-scale turbulence. Understanding the physical mechanisms underlying those energy transfers remains a major theoretical challenge. Here we propose an approach that shed new light on the role of bottom topography in this problem. At a linear level, one efficient way of extracting energy and momentum from the mean-flow above topography undulations is the radiation of lee-waves. The generated lee-waves are well described by inviscid theory which gives a prediction for the energy-loss rate at short time [1]. Using a quasi-linear approach we describe the feedback of waves on the mean-flow occurring mostly close to the bottom topography. This can thereafter impact the lee-waves radiation and thus modify the energy-loss rate for the mean-flow. In this work, we consider the Boussinesq equations with periodic boundary conditions in the zonal direction. Taking advantage of this idealized geometry, we apply zonally-symmetric wave-mean interaction theory [2,3]. The novelty of our work is to discuss the crucial role of dissipative effects, such as molecular or turbulent viscosities, together with the importance of the boundary conditions (free-slip vs no-slip). We provide explicite computations in the case of the free evolution of an initially barotropic flow above a sinusoidal topography with free-slip bottom boundary condition. We show how the existence of the boundary layer for the wave-field can enhance the streaming close to the topography. This leads to the emergence of boundary layer for the mean-flow impacting the energy-loss rate through lee-wave emissions. Our results are compared against direct numerical simulations using the MIT general circulation model and are found to be in good agreement. References [1] S.L. Smith, W.R. Young, Conversion of the Barotropic Tide, JPhysOcean 2002 [2] 0. Bühler, Waves and Mean Flows, second edition, Cambridge university press 2014 [3] J. Muraschko et al, On the application of WKB theory for the simulation of the weakly nonlinear dynamics of gravity waves, Q. J. R. Meteorol. Soc. 2013

An extensive reef system at the Amazon River mouth

PubMed Central

Moura, Rodrigo L.; Amado-Filho, Gilberto M.; Moraes, Fernando C.; Brasileiro, Poliana S.; Salomon, Paulo S.; Mahiques, Michel M.; Bastos, Alex C.; Almeida, Marcelo G.; Silva, Jomar M.; Araujo, Beatriz F.; Brito, Frederico P.; Rangel, Thiago P.; Oliveira, Braulio C. V.; Bahia, Ricardo G.; Paranhos, Rodolfo P.; Dias, Rodolfo J. S.; Siegle, Eduardo; Figueiredo, Alberto G.; Pereira, Renato C.; Leal, Camille V.; Hajdu, Eduardo; Asp, Nils E.; Gregoracci, Gustavo B.; Neumann-Leitão, Sigrid; Yager, Patricia L.; Francini-Filho, Ronaldo B.; Fróes, Adriana; Campeão, Mariana; Silva, Bruno S.; Moreira, Ana P. B.; Oliveira, Louisi; Soares, Ana C.; Araujo, Lais; Oliveira, Nara L.; Teixeira, João B.; Valle, Rogerio A. B.; Thompson, Cristiane C.; Rezende, Carlos E.; Thompson, Fabiano L.

2016-01-01

Large rivers create major gaps in reef distribution along tropical shelves. The Amazon River represents 20% of the global riverine discharge to the ocean, generating up to a 1.3 × 106–km2 plume, and extensive muddy bottoms in the equatorial margin of South America. As a result, a wide area of the tropical North Atlantic is heavily affected in terms of salinity, pH, light penetration, and sedimentation. Such unfavorable conditions were thought to imprint a major gap in Western Atlantic reefs. We present an extensive carbonate system off the Amazon mouth, underneath the river plume. Significant carbonate sedimentation occurred during lowstand sea level, and still occurs in the outer shelf, resulting in complex hard-bottom topography. A permanent near-bottom wedge of ocean water, together with the seasonal nature of the plume’s eastward retroflection, conditions the existence of this extensive (~9500 km2) hard-bottom mosaic. The Amazon reefs transition from accretive to erosional structures and encompass extensive rhodolith beds. Carbonate structures function as a connectivity corridor for wide depth–ranging reef-associated species, being heavily colonized by large sponges and other structure-forming filter feeders that dwell under low light and high levels of particulates. The oxycline between the plume and subplume is associated with chemoautotrophic and anaerobic microbial metabolisms. The system described here provides several insights about the responses of tropical reefs to suboptimal and marginal reef-building conditions, which are accelerating worldwide due to global changes. PMID:27152336

An extensive reef system at the Amazon River mouth.

PubMed

Moura, Rodrigo L; Amado-Filho, Gilberto M; Moraes, Fernando C; Brasileiro, Poliana S; Salomon, Paulo S; Mahiques, Michel M; Bastos, Alex C; Almeida, Marcelo G; Silva, Jomar M; Araujo, Beatriz F; Brito, Frederico P; Rangel, Thiago P; Oliveira, Braulio C V; Bahia, Ricardo G; Paranhos, Rodolfo P; Dias, Rodolfo J S; Siegle, Eduardo; Figueiredo, Alberto G; Pereira, Renato C; Leal, Camille V; Hajdu, Eduardo; Asp, Nils E; Gregoracci, Gustavo B; Neumann-Leitão, Sigrid; Yager, Patricia L; Francini-Filho, Ronaldo B; Fróes, Adriana; Campeão, Mariana; Silva, Bruno S; Moreira, Ana P B; Oliveira, Louisi; Soares, Ana C; Araujo, Lais; Oliveira, Nara L; Teixeira, João B; Valle, Rogerio A B; Thompson, Cristiane C; Rezende, Carlos E; Thompson, Fabiano L

2016-04-01

Large rivers create major gaps in reef distribution along tropical shelves. The Amazon River represents 20% of the global riverine discharge to the ocean, generating up to a 1.3 × 10(6)-km(2) plume, and extensive muddy bottoms in the equatorial margin of South America. As a result, a wide area of the tropical North Atlantic is heavily affected in terms of salinity, pH, light penetration, and sedimentation. Such unfavorable conditions were thought to imprint a major gap in Western Atlantic reefs. We present an extensive carbonate system off the Amazon mouth, underneath the river plume. Significant carbonate sedimentation occurred during lowstand sea level, and still occurs in the outer shelf, resulting in complex hard-bottom topography. A permanent near-bottom wedge of ocean water, together with the seasonal nature of the plume's eastward retroflection, conditions the existence of this extensive (~9500 km(2)) hard-bottom mosaic. The Amazon reefs transition from accretive to erosional structures and encompass extensive rhodolith beds. Carbonate structures function as a connectivity corridor for wide depth-ranging reef-associated species, being heavily colonized by large sponges and other structure-forming filter feeders that dwell under low light and high levels of particulates. The oxycline between the plume and subplume is associated with chemoautotrophic and anaerobic microbial metabolisms. The system described here provides several insights about the responses of tropical reefs to suboptimal and marginal reef-building conditions, which are accelerating worldwide due to global changes.

Color banding on Georges Bank as viewed by coastal zone color scanner

NASA Technical Reports Server (NTRS)

Yentsch, C. S.; Phinney, D. A.; Campbell, J. W.

1994-01-01

Observations of Georges Bank by coastal zone color scanner (CZCS) show bandlike patterns that appear to be related to the large sand dunes and ridges which dominate the bottom topography there. Ship measurements of temperature and chlorophyll on Georges Bank in July 1979 also reflect the influence of the underwater dune fields. The cause of the banding in the CZCS data is unknown but is speculated to be the creation of alternating zones of divergence and convergence by tidal currents as the water flows over the underwater dune-trough configuration. The banding observed by CZCS appears to be seasonal, following the sequence of primary production in the Gulf of Maine, and is believed to be important to biological processes as a site of new production and/or as an effective transport mechanism. Any future models that attempt to interrelate tidal mixing and primary production must consider bottom topography and secondary flows.

Characteristics of the Japanese sea cucumber Apostichopus japonicus's population in the Sea of Japan (Kievka Bay)

NASA Astrophysics Data System (ADS)

Gavrilova, G. S.; Sukhin, I. Yu.

2011-06-01

In Kievka Bay of the Sea of Japan, the population of the Japanese sea cucumber Apostichopus japonicus inhabits the areas of coarse sediments and complex bottom topography. These distributional patterns are closely related to the species' ecology, i.e., to the demand for protection against the wave turbulence. The aggregationing coverage of the sea cucumber population is about 80 hectares, where ˜200 thousand animals were accounted for in the last years. The aggregation's area varies during the year, which is closely related to the species' biological peculiarities, such as their behavioral patterns and the redistribution of their food resources. A significant increase of the juvenile population occurred after the farm-reared sea cucumber spat were released in 2003.

Comparing Vesta Topography

NASA Image and Video Library

2013-09-27

These two images compare topographic maps of the giant asteroid Vesta as discerned by NASA Hubble Space Telescope top and as seen by NASA Dawn spacecraft bottom. Hubble has been in an orbit around Earth, while Dawn orbited Vesta from 2011 to 2012.

Abyssal Upwelling and Downwelling and the role of boundary layers

NASA Astrophysics Data System (ADS)

McDougall, T. J.; Ferrari, R. M.

2016-02-01

The bottom-intensified mixing activity arising from the interaction of internal tides with bottom topography implies that the dianeutral advection in the ocean interior is downwards, rather than upwards as is required by continuity. The upwelling of Bottom Water through density surfaces in the deep ocean is however possible because of the sloping nature of the sea floor. A budget study of the abyss (deeper than 2000m) will be described that shows that while the upwelling of Bottom Water might be 25 Sv, this is achieved by very strong upwelling in the bottom turbulent boundary layer (of thickness 50m) of 100 Sv and strong downwelling in the ocean interior of 75 Sv. This downwelling occurs within 10 degrees of longitude of the continental boundaries. This near-boundary confined strong upwelling and downwelling clearly has implications for the Stommel-Arons circulation.

Pluto Topography and Composition Map

NASA Image and Video Library

2017-09-28

These maps are from New Horizons' data on the topography (top) and composition (bottom) of Pluto's surface. In the high-resolution topographical map, the highlighted red region is high in elevation. The map below, showing the composition, indicates the same section also contains methane, color-coded in orange. One can see the orange features spread into the fuzzier, lower-resolution data that covers the rest of the globe, meaning those areas, too, are high in methane, and therefore likely to be high in elevation. https://photojournal.jpl.nasa.gov/catalog/PIA22036

What caused the decline of China's largest freshwater lake? Attribution analysis on Poyang Lake water level variations in recent years

NASA Astrophysics Data System (ADS)

Ye, Xuchun; Xu, Chong-Yu; Zhang, Qi

2017-04-01

In recent years, dramatic decline of water level of the Poyang Lake, China's largest freshwater lake, has raised wide concerns about the water security and wetland ecosystem. This remarkable hydrological change coincided with several factors like the initial operation of the Three Gorges Dam (TGD) in 2003, the big change of lake bottom topography due to extensive sand mining in the lake since 2000, and also climate change and other human activities in the Yangtze River basin may add to this complexity. Questions raised to what extent that the lake hydrological changes is caused by climate change and/or human activities. In this study, quantitative assessment was conducted to clarify the magnitude and mechanism of specific influencing factors on recent lake decline (2003-2014), with reference to the period of 1980-1999. The attempts were achieved through the reconstruction of lake water level scenarios by the framework of neural network. Major result indicates that the effect of lake bottom topography change due to sand mining activities has became the dominant factor for the recent lake decline, especially in winter season with low water level. However, the effect of TGD regulation shows strong seasonal features, its effect can accounts for 33%-42% of the average water level decline across the lake during the impoundment period of September-October. In addition, the effect of climate change and other human activities over the Yangtze River basin needs to be highly addressed, which is particularly prominent on reducing lake water level during the summer flood season and autumn recession period. The result also revealed that due to different mechanism, the responses of the lake water level to the three influencing factors are not consistent and show great spatial and temporal differences.

Abyssal hills: Influence of topography on benthic foraminiferal assemblages

NASA Astrophysics Data System (ADS)

Stefanoudis, Paris V.; Bett, Brian J.; Gooday, Andrew J.

2016-11-01

Abyssal plains, often thought of as vast flat areas, encompass a variety of terrains including abyssal hills, features that constitute the single largest landscape type on Earth. The potential influence on deep-sea benthic faunas of mesoscale habitat complexity arising from the presence of abyssal hills is still poorly understood. To address this issue we focus on benthic foraminifera (testate protists) in the >150-μm fraction of Megacorer samples (0-1 cm layer) collected at five different sites in the area of the Porcupine Abyssal Plain Sustained Observatory (NE Atlantic, 4850 m water depth). Three sites are located on the tops of small abyssal hills (200-500 m elevation) and two on the adjacent abyssal plain. We examined benthic foraminiferal assemblage characteristics (standing stock, diversity, composition) in relation to seafloor topography (hills vs. plain). Density and rarefied diversity were not significantly different between the hills and the plain. Nevertheless, hills do support a higher species density (i.e. species per unit area), a distinct fauna, and act to increase the regional species pool. Topographically enhanced bottom-water flows that influence food availability and sediment type are suggested as the most likely mechanisms responsible for these differences. Our findings highlight the potential importance of mesoscale heterogeneity introduced by relatively modest topography in regulating abyssal foraminiferal diversity. Given the predominance of abyssal hill terrain in the global ocean, we suggest the need to include faunal data from abyssal hills in assessments of abyssal ecology.

Are Observed Variations of Topography of The '660' Influenced By Lateral Variations of An Underlying Interface ?

NASA Astrophysics Data System (ADS)

Castillo, J.; Mocquet, A.; Vacher, P.; Sotin, C.

Most global studies of lateral variations of topography of the '660' have been per- formed so far with long-period data. This presentation assess the seismic signature of this region when studied with broadband data in the frequency range 0.1-1 Hz. When sampled with P-to-s converted phases, this region shows a complex pattern, associat- ing 3 interfaces at the average depths of 600, 650 and 715 km. First results indicate that lateral topography variations of the '650' fit previous observations by long-period data (Gu et al., 1998), except in some subduction zones, especially in East Asia, where vari- ation trends appear to behave in an opposite way. In such regions, better correlations are found with the behaviour of the '715'. We propose that the seismic signature of long-period waves generated at the bottom of the transition zone may be influenced by both interfaces. Because of the lateral variations of their thickness and velocity jump as a function of thermal context, the signature of one interface could prevail against the other. The transformation of garnet into perovskite, and dissociation of ringwood- ite are tested as possible candidates for the '715' and '650', respectively (Vacher et al., 1998), using available thermoelastic data. Synthetic modelling of converted phases on the velocity profiles computed in different thermal contexts can explain our broadband observations. References : Gu et al., EPSL, 157, 57-67, 1998 ; Vacher et al., PEPI, 106, 275-298, 1998.

The Vertical Profile of Ocean Mixing

NASA Astrophysics Data System (ADS)

Ferrari, R. M.; Nikurashin, M.; McDougall, T. J.; Mashayek, A.

2014-12-01

The upwelling of bottom waters through density surfaces in the deep ocean is not possible unless the sloping nature of the sea floor is taken into account. The bottom--intensified mixing arising from interaction of internal tides and geostrophic motions with bottom topography implies that mixing is a decreasing function of height in the deep ocean. This would further imply that the diapycnal motion in the deep ocean is downward, not upwards as is required by continuity. This conundrum regarding ocean mixing and upwelling in the deep ocean will be resolved by appealing to the fact that the ocean does not have vertical side walls. Implications of the conundrum for the representation of ocean mixing in climate models will be discussed.

The generation of symmetric and asymmetric lump solitons by a bottom topography

NASA Astrophysics Data System (ADS)

Lu, Zhiming

2016-11-01

A group of Lump solutions to the (2+1)-dimensional Kadomtsev-Petviashvili (KP) equation is obtained analytically by making use of Hirota bilinear transform method. Then the generation of symmetric and asymmetric lump solitons by an obliquely-placed three-dimensional bottom topography is numerically investigated using the forced Kadomtsev-Petviashvili-I (fKP-I) equation. The numerical method is based on the third order Runge-Kutta method and the Crank-Nicolson scheme. The main result is the asymmetric generation of asymmetric lump-type solitons downstream of the obstacle.The lump soliton with a smaller amplitude is generated with a longer period and moves in a larger angle with respect to the positive x-axis than the one with a larger amplitude. The amplitude of the lump solitons strongly depend on the volume of the obstacle rather than the shape. Finally the effects of the detuning parameter on the generation of lump solitons is also studied. Project supported by NSFC with No. 11272196.

High Energy Benthic Boundary Layer Experiment (HEBBLE): Preliminary program plan and conceptual design

NASA Technical Reports Server (NTRS)

Frewing, K.

1980-01-01

Deep sea processes of flow-sediment interaction, particularly the role of high energy ocean bottom current events in forming the seafloor topography, transporting material, and mixing the bottom of the water column are examined. A series of observations at and near the sea bottom, in water depths of 4 to 5 km, in areas of the western North Atlantic where high energy current events occur, include site surveys and physical reconnaissance to identify suitable areas and positions, and one or more six month experiments to investigate temporal and spatial variations of high energy events within the boundary layer and their interaction with the seabed. Descriptions of proposed HEBBLE activities are included, with emphasis on technology transfer to the oceanographic community through design, fabrication, testing, and operation of an instrumented ocean bottom lander.

Tide-surge Interaction Intensified by the Taiwan Strait

NASA Astrophysics Data System (ADS)

Zhang, Wen-Zhou; Shi, Fengyan; Hong, Hua-Sheng; Shang, Shao-Ping; Kirby, James T.

2010-06-01

The Taiwan Strait is a long and wide shelf-channel where the hydrodynamics is extremely complex, being characterized by strong tides, and where storm surges frequently occur during the typhoon season. Obvious oscillations due to tide-surge interaction were observed by tide gauges along the northern Fujian coast, the west bank of the Taiwan Strait, during Typhoon Dan (1999). Numerical experiments indicate that nonlinear bottom friction (described by the quadratic formula) is a major factor to predict these oscillations while the nonlinear advective terms and the shallow water effect have little contribution. It is found that the tide-surge interaction in the northern portion of the Taiwan Strait is intensified by the strait. Simulations based on simplified topographies with and without the island of Taiwan show that, in the presence of the island, the channel effect strengthens tidal currents and tends to align the major axes of tidal ellipses along the channel direction. Storm-induced currents are also strengthened by the channel. The pattern of strong tidal currents and storm-induced currents along the channel direction enhances tide-surge interaction via the nonlinear bottom friction, resulting in the obvious oscillations along the northern Fujian coast.

High-frequency internal waves and thick bottom mixed layers observed by gliders in the Gulf Stream

NASA Astrophysics Data System (ADS)

Todd, Robert E.

2017-06-01

Autonomous underwater gliders are conducting high-resolution surveys within the Gulf Stream along the U.S. East Coast. Glider surveys reveal two mechanisms by which energy is extracted from the Gulf Stream as it flows over the Blake Plateau, a portion of the outer continental shelf between Florida and North Carolina where bottom depths are less than 1000 m. Internal waves with vertical velocities exceeding 0.1 m s-1 and frequencies just below the local buoyancy frequency are routinely found over the Blake Plateau, particularly near the Charleston Bump, a prominent topographic feature. These waves are likely internal lee waves generated by the subinertial Gulf Stream flow over the irregular bathymetry of the outer continental shelf. Bottom mixed layers with O(100) m thickness are also frequently encountered; these thick bottom mixed layers likely form in the lee of topography due to enhanced turbulence generated by O(1) m s-1 near-bottom flows.

Anomalous topography on the continental shelf around Hudson Canyon

USGS Publications Warehouse

Knebel, H.J.

1979-01-01

Recent seismic-reflection data show that the topography on the Continental Shelf around Hudson Canyon is composed of a series of depressions having variable spacings (< 100 m to 2 km), depths (1-10 m), outlines, and bottom configurations that give the sea floor an anomalous "jagged" appearance in profile. The acoustic and sedimentary characteristics, the proximity to relict shores, and the areal distribution indicate that this rough topography is an erosional surface formed on Upper Pleistocene silty sands about 13,000 to 15,000 years ago by processes related to Hudson Canyon. The pronounced southward extension of the surface, in particular, may reflect a former increase in the longshore-current erosion capacity caused by the loss of sediments over the canyon. Modern erosion or nondeposition of sediments has prevented the ubiquitous sand sheet on the Middle Atlantic shelf from covering the surface. The "anomalous" topography may, in fact, be characteristic of areas near other submarine canyons that interrupt or have interrupted the longshore drift of sediments. ?? 1979.

A General Pressure Gradient Formulation for Ocean Models, Part 1: Scheme Design and Diagnostic Analysis, Part II: Energy, Momentum, and Bottom Torque Consistency

NASA Technical Reports Server (NTRS)

Song, Y. T.

1998-01-01

A Jacobian formulation of the pressure gradient force for use in models with topography following coordinates is proposed. It can be used in conjunction with any vertical coordinate system and is easily implemented.

Directional bottom roughness associated with waves, currents, and ripples

USGS Publications Warehouse

Sherwood, Christopher R.; Rosati, Julie D.; Wang, Ping; Roberts, Tiffany M.

2011-01-01

Roughness lengths are used in wave-current bottom boundary layer models to parameterize drag associated with grain roughness, the effect of saltating grains during sediment transport, and small-scale bottom topography (ripples and biogenic features). We made field measurements of flow parameters and recorded sonar images of ripples at the boundary of a sorted-bedform at ~12-m depth on the inner shelf for a range of wave and current conditions over two months. We compared estimates of apparent bottom roughness inferred from the flow measurements with bottom roughness calculated using ripple geometry and the Madsen (1994) one-dimensional (vertical) wave-current bottom boundary layer model. One result of these comparisons was that the model over predicted roughness of flow from the dormant large ripples when waves were small. We developed a correction to the ripple-roughness model that incorporates an apparent ripple wavelength related to the combined wave-current flow direction. This correction provides a slight improvement for low-wave conditions, but does not address several other differences between observations and the modeled roughness.

Development of nanotopography during SIMS characterization of thin films of Ge1-xSnx alloy

NASA Astrophysics Data System (ADS)

Secchi, M.; Demenev, E.; Colaux, J. L.; Giubertoni, D.; Dell'Anna, R.; Iacob, E.; Gwilliam, R. M.; Jeynes, C.; Bersani, M.

2015-11-01

This work presents a study of application of secondary ion mass spectrometry (SIMS) to measure tin concentration in Ge1-xSnx alloy with x higher than solid solubility ∼1%, i.e. well above the diluted regime where SIMS measurements usually provide the most reliable quantitative results. SIMS analysis was performed on Sn+ ion implanted Ge films, epitaxially deposited on Si, and on chemical vapor deposition deposited Ge0.93Sn0.07 alloy. Three SIMS conditions were investigated, varying primary beam ion species and secondary ion polarity keeping 1 keV impact energy. Best depth profile accuracy, best agreement with the fluences measured by Rutherford backscattering spectrometry, good detection limit (∼1 × 1017 at/cm3) and depth resolution (∼2 nm/decade) are achieved in Cs+/SnCs+ configuration. However, applied sputtering conditions (Cs+ 1 keV, 64° incidence vs. normal) induced an early formation of surface topography on the crater bottom resulting in significant variation of sputtering yield. Atomic force microscopy shows a peculiar topography developed on Ge: for oblique incidence, a topography consisting in a sequence of dots and ripples was observed on the crater bottom. This behavior is unusual for grazing incidence and has been observed to increase with the Cs+ fluence. Rotating sample during sputtering prevents this ripple formation and consequently improves the depth accuracy.

Implementation of the new hydrographic technologies for bottom topography and seafloor gas venting investigations in the russian northern seas

NASA Astrophysics Data System (ADS)

Koloskov, Evgenii

2017-04-01

The report examines modern hydrographic technologies for the Russian northern seas investigations. The new hydro acoustics methods for seabed study are discussed. It presents stages of seafloor relief studies in the Russian Arctic seas since the 1950s and the obtained results. At the beginning of the 21st century an entirely new phase of bathymetric investigations began with the use of Multibeam Echosounders (MB) and modern hydrographic software. The software tools to process and analyze the bathymetry, and more recently to characterize the seabed from the backscatter, are available in a majority of modern sonar systems. Besides the bathymetry and sonar data, modern MB can produce water column images. These hydrographic technologies provide the possibility to achieve a high level of the seafloor topography. The latest generation of hydrographic MB now has the ability to provide the water column images along with the seafloor. The gas seeps from multibeam water column data can be distantly discerned against the seabed relief background with the aid of the Fledermause software package ("FMMidwater" module). The ability to integrate the water column data with the seafoor and other information,in an integrated geospatial and temporal environment, enhanced the analysis and interpretation of the data which is essential for marine geological research and investigations. The modern hydrographic equipment presents the ability to integrate the MB digital relief models (DTM) and sub bottom profiler data. This provide the possibility to obtain not only the detailed seabed topography, but also the additional information concerning the structure of under bottom soil layers and presence of the endogenous objects in near bottom environment. The importance of the hydrographic software tools needed to process and analyze the bathymetry and water column data are emphasized. The practical importance of the water column and bottom profiler data processing for the submarine gas-hydrates survey is stated. The attention is paid to the implementation of the parametric sub bottom profilers - the low frequency sonar for the sea bottom vertical section investigation. The ability for the integrated presentation of the multibeam bathymetry and vertical curtains in the 3D environment are discussed. As an example of the modern swath survey results achieved with Kongsberg EM2040CD MB and hydrographic information technology QINSy/ Fledermause, are discussed and presented. This survey was performed for the RosNeft company in the Kara sea. Recommendations for the implementation of the multi beam echo sounder and parametric sub bottom profiler for the combined hydrographic and submarine gas-hydrates survey in the Russian northern seas are delivered.The gas-hydrate survey guidelines using MB and QINSy/Fledermause software are provided. The hydrographic software tools used to process and analyze the bathymetry can create the seafloor DTM with the high degree of resolution and provide 3D visualization.These new possibilities provide such realistic view of the sea bottom relief and environment that can be characterized as the marine landscapes. Thus it became possible to investigate the relief morphological peculiarities and obtain the information about the relief genesis. This opens the new opportunities for using the acoustic techniques for varies types of marine activity including the bottom environmental study. The appearance of the bottom thermokarst activity derived from the high resolution DTM generated from the real time MB data is presented. The bottom thermokarst provides the potential threat for underwater pipelines and other submarine communications. The arctic bottom relief peculiarities are also covered including grounded hummock traces and dome-shaped elevations. The investigation of such bottom land forms has become possible recently as the result of implementing the wide swath survey methods. Such unique relief features are in general related to seabed gas venting in the form of the submarine gas-hydrates seeps. The opportunities for investigation of the morphological relief peculiarities and getting the new information is mportant also for varies types of marine activity including the marine ecology study. The arctic sea specific microrelief images are provided to show the abnormality of the bottom surface. The main attention is paid to specific and bottom features such as trenches the grounded hummock traces and dome-shaped elevations of the Pingo-type-unique forms of microrelief usually confined to the bottom gas flow in the form of methane emissions. The attention is also paid to the consequences of the global climate change and its influence on the bottom sole. Key words: hydrographic technologies, hydro acoustics methods, swathe survey, sea bottom vertical section, submarine gas-hydrates, submarine permafrost, seafloor gas venting,multi beam echo sounder, parametric sub bottom profiler.

Nearshore coastal mapping. [in Lake Michigan and Puerto Rico

NASA Technical Reports Server (NTRS)

Polcyn, F. C.; Lyzenga, D. R.

1975-01-01

Two test sites of different water quality and bottom topography were used to test for maximum water depth penetration using the Skylab S-192 MSS for measurement of nearshore coastal bathymetry. Sites under investigation lie along the Lake Michigan coastline where littoral transport acts to erode sand bluffs and endangers developments along 1,200 miles of shore, and on the west coast of Puerto Rico where unreliable shoal location and depth information constitutes a safety hazard to navigation. The S-192 and S-190A and B provide data on underwater features because of water transparency in the blue/green portion of the spectrum. Depth of 20 meters were measured with the S-192 in the Puerto Rico test site. The S-190B photography with its improved spatial resolution clearly delineates the triple sand bar topography in the Lake Michigan test site. Several processing techniques were employed to test for maximum depth measurement with least error. The results are useful for helping to determine an optimum spectral bandwidth for future space sensors that will increase depth measurements for different water attenuation conditions where a bottom reflection is detectable.

Significant Dissipation of Tidal Energy in the Deep Ocean Inferred from Satellite Altimeter Data

NASA Technical Reports Server (NTRS)

Egbert, G. D.; Ray, R. D.

2000-01-01

How and where the ocean tides dissipate their energy are longstanding questions that have consequences ranging from the history of the Moon to the mixing of the oceans. Historically, the principal sink of tidal energy has been thought to be bottom friction in shallow seas. There has long been suggestive however, that tidal dissipation also occurs in the open ocean through the scattering by ocean-bottom topography of surface tides into internal waves, but estimates of the magnitude of this possible sink have varied widely. Here we use satellite altimeter data from Topex/Poseidon to map empirically the tidal energy dissipation. We show that approximately 10(exp 12) watts-that is, 1 TW, representing 25-30% of the total dissipation-occurs in the deep ocean, generally near areas of rough topography. Of the estimated 2 TW of mixing energy required to maintain the large-scale thermohaline circulation of the ocean, one-half could therefore be provided by the tides, with the other half coming from action on the surface of the ocean.

Diurnal tides in the Arctic Ocean

NASA Technical Reports Server (NTRS)

Kowalik, Z.; Proshutinsky, A. Y.

1993-01-01

A 2D numerical model with a space grid of about 14 km is applied to calculate diurnal tidal constituents K(1) and O(1) in the Arctic Ocean. Calculated corange and cotidal charts show that along the continental slope, local regions of increased sea level amplitude, highly variable phase and enhanced currents occur. It is shown that in these local regions, shelf waves (topographic waves) of tidal origin are generated. In the Arctic Ocean and Northern Atlantic Ocean more than 30 regions of enhanced currents are identified. To prove the near-resonant interaction of the diurnal tides with the local bottom topography, the natural periods of oscillations for all regions have been calculated. The flux of energy averaged over the tidal period depicts the gyres of semitrapped energy, suggesting that the shelf waves are partially trapped over the irregularities of the bottom topography. It is shown that the occurrence of near-resonance phenomenon changes the energy flow in the tidal waves. First, the flux of energy from the astronomical sources is amplified in the shelf wave regions, and afterwards the tidal energy is strongly dissipated in the same regions.

Bifurcation of the Kuroshio Extension at the Shatsky Rise

NASA Astrophysics Data System (ADS)

Hurlburt, Harley E.; Metzger, E. Joseph

1998-04-01

A 1/16° six-layer Pacific Ocean model north of 20°S is used to investigate the bifurcation of the Kuroshio Extension at the main Shatsky Rise and the pathway of the northern branch from the bifurcation to the subarctic front. Upper ocean-topographic coupling via a mixed barotropic-baroclinic instability is essential to this bifurcation and to the formation and mean pathway of the northern branch as are several aspects of the Shatsky Rise complex of topography and the latitude of the Kuroshio Extension in relation to the topography. The flow instabilities transfer energy to the abyssal layer where it is constrained by geostrophic contours of the bottom topography. The topographically constrained abyssal currents in turn steer upper ocean currents, which do not directly impinge on the bottom topography. This includes steering of mean pathways. Obtaining sufficient coupling requires very fine resolution of mesoscale variability and sufficient eastward penetration of the Kuroshio as an unstable inertial jet. Resolution of 1/8° for each variable was not sufficient in this case. The latitudinal extent of the main Shatsky Rise (31°N-36°N) and the shape of the downward slope on the north side are crucial to the bifurcation at the main Shatsky Rise, with both branches passing north of the peak. The well-defined, relatively steep and straight eastern edge of the Shatsky Rise topographic complex (30°N-42°N) and the southwestward abyssal flow along it play a critical role in forming the rest of the Kuroshio northern branch which flows in the opposite direction. A deep pass between the main Shatsky Rise and the rest of the ridge to the northeast helps to link the northern fork of the bifurcation at the main rise to the rest of the northern branch. Two 1/16° "identical twin" interannual simulations forced by daily winds 1981-1995 show that the variability in this region is mostly nondeterministic on all timescales that could be examined (up to 7 years in these 15-year simulations). A comparison of climatologically forced and interannual simulations over the region 150°E-180°E, 29°N-47°N showed greatly enhanced abyssal and upper ocean eddy kinetic energy and much stronger mean abyssal currents east of the Emperor Seamount Chain (about 170°E) in the interannual simulations but little difference west of 170°E. This greatly enhanced the upper ocean-topographic coupling in the interannual simulations east of 170°E. This coupling affected the latitudinal positioning of the eastward branches of the Kuroshio Extension and tended to reduce latitudinal movement compared to the climatologically forced simulation, including a particularly noticeable impact from the Hess Rise. Especially in the interannual simulations, effects of almost all topographic features in the region could be seen in the mean upper ocean currents (more so than in instantaneous currents), including meanders and bifurcations of major and minor currents, closed circulations, and impacts from depressions and rises of large and small amplitudes.

Geographic variability in elevation and topographic constraints on the distribution of native and nonnative trout in the Great Basin

USGS Publications Warehouse

Warren, Dana R.; Dunham, Jason B.; Hockman-Wert, David

2014-01-01

Understanding local and geographic factors influencing species distributions is a prerequisite for conservation planning. Our objective in this study was to model local and geographic variability in elevations occupied by native and nonnative trout in the northwestern Great Basin, USA. To this end, we analyzed a large existing data set of trout presence (5,156 observations) to evaluate two fundamental factors influencing occupied elevations: climate-related gradients in geography and local constraints imposed by topography. We applied quantile regression to model upstream and downstream distribution elevation limits for each trout species commonly found in the region (two native and two nonnative species). With these models in hand, we simulated an upstream shift in elevation limits of trout distributions to evaluate potential consequences of habitat loss. Downstream elevation limits were inversely associated with latitude, reflecting regional gradients in temperature. Upstream limits were positively related to maximum stream elevation as expected. Downstream elevation limits were constrained topographically by valley bottom elevations in northern streams but not in southern streams, where limits began well above valley bottoms. Elevation limits were similar among species. Upstream shifts in elevation limits for trout would lead to more habitat loss in the north than in the south, a result attributable to differences in topography. Because downstream distributions of trout in the north extend into valley bottoms with reduced topographic relief, trout in more northerly latitudes are more likely to experience habitat loss associated with an upstream shift in lower elevation limits. By applying quantile regression to relatively simple information (species presence, elevation, geography, topography), we were able to identify elevation limits for trout in the Great Basin and explore the effects of potential shifts in these limits that could occur in response to changing climate conditions that alter streams directly (e.g., through changes in temperature and precipitation) or indirectly (e.g., through changing water use).

The relationship between surface topography, gravity anomalies, and temperature structure of convection

NASA Technical Reports Server (NTRS)

Parsons, B.; Daly, S.

1983-01-01

Consideration is given to the relationship between the temperature structure of mantle convection and the resulting surface topography and gravity anomalies, which are used in its investigation. Integral expressions relating the three variables as a function of wavelength are obtained with the use of Green's function solutions to the equations of motion for the case of constant-viscosity convection in a plane layer subject to a uniform gravitational field. The influence of the boundary conditions, particularly at large wavelengths, is pointed out, and surface topographies and gravity produced by convection are illustrated for a number of simple temperature distributions. It is shown that the upper thermal boundary layer plays an important role in determining the surface observables, while temperatures near the bottom of the layer affect mainly that boundary. This result is consistent with an explanation of geoid anomalies over mid-ocean swells in terms of convection beneath the lithosphere.

Bottom currents observed in and around a submarine valley on the continental slope of the northern South China Sea

NASA Astrophysics Data System (ADS)

Wu, Lunyu; Xiong, Xuejun; Li, Xiaolong; Shi, Maochong; Guo, Yongqing; Chen, Liang

2016-12-01

Bottom currents at about 1000 m depth in and around a submarine valley on the continental slope of the northern South China Sea were studied by a 14-month long experiment from July 2013 to September 2014. The observations reveal that bottom currents are strongly influenced by the topography, being along valley axis or isobaths. Power density spectrum analysis shows that all the currents have significant peaks at diurnal and semi-diurnal frequencies. Diurnal energy is dominant at the open slope site, which is consistent with many previous studies. However, at the site inside the valley the semi-diurnal energy dominates, although the distance between the two sites of observation is quite small (11 km) compared to a typical horizontal first-mode internal tide wavelength (200 km). We found this phenomenon is caused by the focusing of internal waves of certain frequencies in the valley. The inertial peak is found only at the open slope site in the first deployment but missing at the inside valley site and the rest of the deployments. Monthly averaged residual currents reveal that the near-bottom currents on the slope flow southwestward throughout the year except in August and September, 2013, from which we speculate that this is a result of the interaction between a mesoscale eddy and the canyon/sag topography. Currents inside the valley within about 10 mab basically flow along slope and in the layers above the 10 mab the currents are northwestward, that is, from the deep ocean to the shelf. The monthly mean current vectors manifest an Ekman layer-like vertical structure at both sites, which rotate counter-clockwise looking from above.

Numerical modeling of marine Gravity data for tsunami hazard zone mapping

NASA Astrophysics Data System (ADS)

Porwal, Nipun

2012-07-01

Tsunami is a series of ocean wave with very high wavelengths ranges from 10 to 500 km. Therefore tsunamis act as shallow water waves and hard to predict from various methods. Bottom Pressure Recorders of Poseidon class considered as a preeminent method to detect tsunami waves but Acoustic Modem in Ocean Bottom Pressure (OBP) sensors placed in the vicinity of trenches having depth of more than 6000m fails to propel OBP data to Surface Buoys. Therefore this paper is developed for numerical modeling of Gravity field coefficients from Bureau Gravimetric International (BGI) which do not play a central role in the study of geodesy, satellite orbit computation, & geophysics but by mathematical transformation of gravity field coefficients using Normalized Legendre Polynomial high resolution ocean bottom pressure (OBP) data is generated. Real time sea level monitored OBP data of 0.3° by 1° spatial resolution using Kalman filter (kf080) for past 10 years by Estimating the Circulation and Climate of the Ocean (ECCO) has been correlated with OBP data from gravity field coefficients which attribute a feasible study on future tsunami detection system from space and in identification of most suitable sites to place OBP sensors near deep trenches. The Levitus Climatological temperature and salinity are assimilated into the version of the MITGCM using the ad-joint method to obtain the sea height segment. Then TOPEX/Poseidon satellite altimeter, surface momentum, heat, and freshwater fluxes from NCEP reanalysis product and the dynamic ocean topography DOT_DNSCMSS08_EGM08 is used to interpret sea-bottom elevation. Then all datasets are associated under raster calculator in ArcGIS 9.3 using Boolean Intersection Algebra Method and proximal analysis tools with high resolution sea floor topographic map. Afterward tsunami prone area and suitable sites for set up of BPR as analyzed in this research is authenticated by using Passive microwave radiometry system for Tsunami Hazard Zone Mapping by network of seismometers. Thus using such methodology for early Tsunami Hazard Zone Mapping also increase accuracy and reduce time period for tsunami predictions. KEYWORDS:, Tsunami, Gravity Field Coefficients, Ocean Bottom Pressure, ECCO, BGI, Sea Bottom Temperature, Sea Floor Topography.

Trawling on seamounts: can we balance exploitation and conservation?

NASA Astrophysics Data System (ADS)

Clark, M. R.; O'Driscoll, R. L.; Rowden, A. A.

2006-12-01

Seamounts are prominent features of the worlds underwater topography. They are widely regarded as productive, but fragile, habitat. They are the focus of commercial fishing for a number of demersal and pelagic fish and invertebrate species. Most fishing operations have some impact, either on the target species, associated bycatch species, or the benthic communities and habitat. Longlines, gillnets, traps and pots can all have some effect on the seafloor, but bottom trawling is the most well-known for causing considerable impact on the benthic habitat. There are few published studies on seamounts specifically, and recent research in New Zealand will be described. This has focused on deepwater fisheries for species such as orange roughy, which can form large aggregations over seamount features. The research includes analysis of the distribution of commercial catch and effort data from deepwater seamount fisheries, and "compare and contrast" surveys of seamounts that indicate the effects of bottom trawling can be severe on benthic invertebrate fauna. Fishing has clear consequences for structural complexity of the benthic habitat, and can alter species composition, and abundance. The results of such research are discussed with respect to management of seamount habitat in New Zealand, and the search for a balance that can allow sustainable seamount fisheries, and biodiversity conservation.

Optical image modulation above the submarine bottom topography: a case study on the Taiwan Banks, China

NASA Astrophysics Data System (ADS)

Li, Yan; Hu, Jianyu; Li, Jing; Fu, Bin; Ma, Liming

2003-05-01

A possible mechanism to explain the correlation between submarine topography and the direct sunlight specially reflected from the sea surface with variable roughness caused by the bottom-current effect was suggested fifteen years ago by Henning et al. in International Journal of Remote Sensing, 9, 45-67, after comparing radar satellite image and Skylab satellite photograph of the North American east coast (Nantucket Shoals) with submarine relief features. A case study is carried out in the famous sand waves field located at the Taiwan banks of Taiwan Strait in August 1998. The TM images, either visible bands (TM1, TM2, TM3) or near infrared bands (TM4, TM5, TM7), shows submarine relief features for sand waves, with wavelength of 300 to 2000 meters, riding on the lager scale sand ridges and channel system. Sea truth data including 660 nm beam attenuation coefficient profiles were conducted in the same period. We compare signals of TM images, attenuation coefficient profiles, and sounding maps of the Taiwan Bands. The subsurface upwelling signals with contributions of the water column and the bottom, either estimated by single or quasi-single-scattering theory or revealed by the TM images after removing the contribution of direct sunlight reflected signals from sea surface, were too weak to distinguish the ridges and troughs of bedforms especially for red and near infrared bands. However, the direct sunlight specially reflected signals from the sea surface, approximately at same level in water-leaving reflectance not only for visible bands (TM1, TM2, TM3) but also for near infrared bands (TM4, TM5, TM7), was the major submarine bottom topography signals especially for those pixels towards the direction of the sun azimuth. Following a physical description for the lee waves appeared on free surface when the current flows round an underwater obstacle, the direct sunlight reflected signals related wave face slope, is dominated by the height and depth of sand waves and sand ridges, and current speed of the flows over those bedforms. The direct sunlight reflected signals from the sea surface could be regarded as a powerful tool to detect bedforms and other underwater obstacles.

Idealised large-eddy-simulation of thermally driven flows over an isolated mountain range with multiple ridges

NASA Astrophysics Data System (ADS)

Lang, Moritz N.; Gohm, Alexander; Wagner, Johannes S.; Leukauf, Daniel; Posch, Christian

2014-05-01

Two dimensional idealised large-eddy-simulations are performed using the WRF model to investigate thermally driven flows during the daytime over complex terrain. Both the upslope flows and the temporal evolution of the boundary layer structure are studied with a constant surface heat flux forcing of 150 W m-2. In order to distinguish between different heating processes the flow is Reynold decomposed into its mean and turbulent part. The heating processes associated with the mean flow are a cooling through cold-air advection along the slopes and subsidence warming within the valleys. The turbulent component causes bottom-up heating near the ground leading to a convective boundary layer (CBL) inside the valleys. Overshooting potentially colder thermals cool the stably stratified valley atmosphere above the CBL. Compared to recent investigations (Schmidli 2013, J. Atmos. Sci., Vol. 70, No. 12: pp. 4041-4066; Wagner et al. 2014, manuscript submitted to Mon. Wea. Rev.), which used an idealised topography with two parallel mountain crests separated by a straight valley, this project focuses on multiple, periodic ridges and valleys within an isolated mountain range. The impact of different numbers of ridges on the flow structure is compared with the sinusoidal envelope-topography. The present simulations show an interaction between the smaller-scale upslope winds within the different valleys and the large-scale flow of the superimposed mountain-plain wind circulation. Despite a smaller boundary layer air volume in the envelope case compared to the multiple ridges case the volume averaged heating rates are comparable. The reason is a stronger advection-induced cooling along the slopes and a weaker warming through subsidence at the envelope-topography compared to the mountain range with multiple ridges.

The circulation of a baroclinic ocean around planetary scale islands with topography

NASA Astrophysics Data System (ADS)

Pedlosky, J.

2010-12-01

The circulation around planetary-scale islands is considered for an island with a topographic skirt for a stratified ocean. The simplest model of the ocean is a two layer ocean in a circular domain with the island in the center. When the girdling topography is steep, closed geostrophic contours guide the flow in each of the two layers although that guiding occurs at different horizontal locations in each layer. For flows with weak dissipation, modeled as bottom and interfacial friction, explicit formulae are given for the dependence of the streamfunction in each layer on the ambient potential vorticity, f/(layer depth). Numerical model calculations will be presented to supplement the analytical results.

Near-Bottom High Resolution Magnetic Observations Over and Around an Active Oceanic Core Complex, MAR 13°N

NASA Astrophysics Data System (ADS)

Searle, R. C.; Tominaga, M.; Peirce, C.; Reston, T. J.; MacLeod, C. J.

2016-12-01

Oceanic Core complexes (OCCs) associated with major detachment faults represent an important mode of seafloor spreading and crustal accretion processes at slow spreading rates. The processes of plate construction and modification at such sites are highly asymmetric, and plate accretion (spreading) rates may also be asymmetric. As part of a program to further understand these asymmetric processes and the geometry of the associated detachments, in January-February 2016 we carried out ten dives of 24 hr duration using the AUV Autosub 6000 to acquire high resolution, near-bottom magnetic field and seafloor topography in an area rich in OCCs on the Mid-Atlantic Ridge near 13°N. Autosub ran at a nominal height of 115-150 m above seafloor with a speed of approximately 1 ms-1. Two closely-spaced, W-E profiles were run across the 13°20'N OCC, which is believed to be the footwall of an active detachment, and two more closely spaced W-E profiles were run at 13°25'N, midway between OCC 1320 and the next OCC to the north, which is actively or has recently stopped slipping. Three more widely-spaced (approximately 5 km) W-E profiles were interspersed between these. All these profiles were designed to extend between the expected positions of the Jaramillo anomalies (0.99 Ma), approximately 14 km either side of the ridge axis. The remainder of the dives ran over and around the 13° 30'N OCC in grids with lines 500 m apart. High-resolution (4 m grid) seafloor topography was measured concurrently with magnetics using a Kongsberg EM2040 multibeam sonar and Applied Physics Systems 1540 fluxgate magnetometer. Preliminary examination of the data shows the OCC largely surrounded to the north, south and east (young) sides by recent hummocky volcanism, which correlates with high-amplitude, short wavelength magnetic anomalies. The western side of the OCC, which should be older, has more subdued magnetic anomaly character and volcanic relief. The smooth, striated dome of the OCC has uniformly low-amplitude, long wavelength magnetic anomalies, suggesting the presence there of an internally coherent magnetic source with lower magnetisations than the volcanics, possibly a faulted formation of gabbros and/or serpentinites.

Do rivers really obey power-laws? Using continuous high resolution measurements to define bankfull channel and evaluate downstream hydraulic-scaling over large changes in drainage area

NASA Astrophysics Data System (ADS)

Scher, C.; Tennant, C.; Larsen, L.; Bellugi, D. G.

2016-12-01

Advances in remote-sensing technology allow for cost-effective, accurate, high-resolution mapping of river-channel topography and shallow aquatic bathymetry over large spatial scales. A combination of near-infrared and green spectra airborne laser swath mapping was used to map river channel bathymetry and watershed geometry over 90+ river-kilometers (75-1175 km2) of the Greys River in Wyoming. The day of flight wetted channel was identified from green LiDAR returns, and more than 1800 valley-bottom cross-sections were extracted at regular 50-m intervals. The bankfull channel geometry was identified using a "watershed-based" algorithm that incrementally filled local minima to a "spill" point, thereby constraining areas of local convergence and delineating all the potential channels along the cross-section for each distinct "spill stage." Multiple potential channels in alluvial floodplains and lack of clearly defined channel banks in bedrock reaches challenge identification of the bankfull channel based on topology alone. Here we combine a variety of topological measures, geometrical considerations, and stage levels to define a stage-dependent bankfull channel geometry, and compare the results with day of flight wetted channel data. Initial results suggest that channel hydraulic geometry and basin hydrology power-law scaling may not accurately capture downstream channel adjustments for rivers draining complex mountain topography.

Forest resources of the south Arkansas delta

Treesearch

R.K. Winters

1939-01-01

The portion of Arkansas treated in this report is a former flood plain of Mississippi River, through which the Arkansas, the White, the Mississippi, and other rivers have cut new channels and developed a later flood plain at a lower level. The soils and topography differ accordingly on the two sites. The present flood plains, or bottoms, are generally flat; wheareas...

Bumps in river profiles: uncertainty assessment and smoothing using quantile regression techniques

NASA Astrophysics Data System (ADS)

Schwanghart, Wolfgang; Scherler, Dirk

2017-12-01

The analysis of longitudinal river profiles is an important tool for studying landscape evolution. However, characterizing river profiles based on digital elevation models (DEMs) suffers from errors and artifacts that particularly prevail along valley bottoms. The aim of this study is to characterize uncertainties that arise from the analysis of river profiles derived from different, near-globally available DEMs. We devised new algorithms - quantile carving and the CRS algorithm - that rely on quantile regression to enable hydrological correction and the uncertainty quantification of river profiles. We find that globally available DEMs commonly overestimate river elevations in steep topography. The distributions of elevation errors become increasingly wider and right skewed if adjacent hillslope gradients are steep. Our analysis indicates that the AW3D DEM has the highest precision and lowest bias for the analysis of river profiles in mountainous topography. The new 12 m resolution TanDEM-X DEM has a very low precision, most likely due to the combined effect of steep valley walls and the presence of water surfaces in valley bottoms. Compared to the conventional approaches of carving and filling, we find that our new approach is able to reduce the elevation bias and errors in longitudinal river profiles.

Transport processes near coastal ocean outfalls

USGS Publications Warehouse

Noble, M.A.; Sherwood, C.R.; Lee, Hooi-Ling; Xu, Jie; Dartnell, P.; Robertson, G.; Martini, M.

2001-01-01

The central Southern California Bight is an urbanized coastal ocean where complex topography and largescale atmospheric and oceanographic forcing has led to numerous sediment-distribution patterns. Two large embayments, Santa Monica and San Pedro Bays, are connected by the short, very narrow shelf off the Palos Verdes peninsula. Ocean-sewage outfalls are located in the middle of Santa Monica Bay, on the Palos Verdes shelf and at the southeastern edge of San Pedro Bay. In 1992, the US Geological Survey, together with allied agencies, began a series of programs to determine the dominant processes that transport sediment and associated pollutants near the three ocean outfalls. As part of these programs, arrays of instrumented moorings that monitor currents, waves, water clarity, water density and collect resuspended materials were deployed on the continental shelf and slope information was also collected on the sediment and contaminant distributions in the region. The data and models developed for the Palos Verdes shelf suggest that the large reservoir of DDT/DDE in the coastal ocean sediments will continue to be exhumed and transported along the shelf for a long time. On the Santa Monica shelf, very large internal waves, or bores, are generated at the shelf break. The near-bottom currents associated with these waves sweep sediments and the associated contaminants from the shelf onto the continental slope. A new program underway on the San Pedro shelf will determine if water and contaminants from a nearby ocean outfall are transported to the local beaches by coastal ocean processes. The large variety of processes found that transport sediments and contaminants in this small region of the continental margin suggest that in regions with complex topography, local processes change markedly over small spatial scales. One cannot necessarily infer that the dominant transport processes will be similar even in adjacent regions.

A Record-High Ocean Bottom Pressure in the South Pacific Observed by GRACE

NASA Technical Reports Server (NTRS)

Boening, Carmen; Lee, Tong; Zlotnicki, Victor

2011-01-01

In late 2009 to early 2010, the Gravity Recovery and Climate Experiment (GRACE) satellite pair observed a record increase in ocean bottom pressure (OBP) over a large mid-latitude region of the South East Pacific. Its magnitude is substantially larger than other oceanic events in the Southern Hemisphere found in the entire GRACE data records (2003-2010) on multi-month time scales. The OBP data help to understand the nature of a similar signal in sea surface height (SSH) anomaly observed by altimetry: the SSH increase is mainly due to mass convergence. Analysis of the barotropic vorticity equation using scatterometer data, atmospheric reanalysis product, and GRACE and altimeter an atmospheric reanalysis product observations suggests that the observed OBP/SSH signal was primarily caused by wind stress curl associated with a strong and persistent anticyclone in late 2009 in combination with effects of planetary vorticity gradient, bottom topography, and friction

Managing Construction Operations Visually: 3-D Techniques for Complex Topography and Restricted Visibility

ERIC Educational Resources Information Center

Rodriguez, Walter; Opdenbosh, Augusto; Santamaria, Juan Carlos

2006-01-01

Visual information is vital in planning and managing construction operations, particularly, where there is complex terrain topography and salvage operations with limited accessibility and visibility. From visually-assessing site operations and preventing equipment collisions to simulating material handling activities to supervising remotes sites…

Gravity-induced stresses near a vertical cliff

USGS Publications Warehouse

Savage, W.Z.

1993-01-01

The exact solution for gravity-induced stresses beneath a vertical cliff presented here has application to the design of cut slopes in rock, compares favorably with published photoelastic and finite-element results for this problem, and satisfies the condition that shear and normal stresses vanish on the ground surface, except at the bottom corner where stress concentrations exist. The solution predicts that horizontal stresses are tensile away from the bottom of the cliff-effects caused by movement below the cliff in response to the gravity loading of the cliff. Also, it is shown that along the top of the cliff normal stresses reduce to those predicted for laterally constrained flat-lying topography. ?? 1993.

Propagation and Signal Modeling

NASA Astrophysics Data System (ADS)

Jensen, Finn B.

The use of sound in the sea is ubiquitous: Apart from the military aspect of trying to detect an adversary’s mines and submarines, ship-mounted sonars measure water depth, ship speed, and the presence of fish shoals. Side-scan systems are used for mapping the bottom topography, sub-bottom profilers for getting information about the deeper layering, and other sonar systems for locating pipelines and cables on the seafloor. Sound is also used for navigating submerged vehicles, for underwater communications and for tracking marine mammals. Finally, in the realm of ‘acoustical oceanography’ and ‘ocean acoustic tomography,’ sound is used for measuring physical parameters of the ocean environment and for monitoring oceanic processes [1-6].

Inner core boundary topography explored with reflected and diffracted P waves

NASA Astrophysics Data System (ADS)

deSilva, Susini; Cormier, Vernon F.; Zheng, Yingcai

2018-03-01

The existence of topography of the inner core boundary (ICB) can affect the amplitude, phase, and coda of body waves incident on the inner core. By applying pseudospectral and boundary element methods to synthesize compressional waves interacting with the ICB, these effects are predicted and compared with waveform observations in pre-critical, critical, post-critical, and diffraction ranges of the PKiKP wave reflected from the ICB. These data sample overlapping regions of the inner core beneath the circum-Pacific belt and the Eurasian, North American, and Australian continents, but exclude large areas beneath the Pacific and Indian Oceans and the poles. In the pre-critical range, PKiKP waveforms require an upper bound of 2 km at 1-20 km wavelength for any ICB topography. Higher topography sharply reduces PKiKP amplitude and produces time-extended coda not observed in PKiKP waveforms. The existence of topography of this scale smooths over minima and zeros in the pre-critical ICB reflection coefficient predicted from standard earth models. In the range surrounding critical incidence (108-130 °), this upper bound of topography does not strongly affect the amplitude and waveform behavior of PKIKP + PKiKP at 1.5 Hz, which is relatively insensitive to 10-20 km wavelength topography height approaching 5 km. These data, however, have a strong overlap in the regions of the ICB sampled by pre-critical PKiKP that require a 2 km upper bound to topography height. In the diffracted range (>152°), topography as high as 5 km attenuates the peak amplitudes of PKIKP and PKPCdiff by similar amounts, leaving the PKPCdiff/PKIKP amplitude ratio unchanged from that predicted by a smooth ICB. The observed decay of PKPCdiff into the inner core shadow and the PKIKP-PKPCdiff differential travel time are consistent with a flattening of the outer core P velocity gradient near the ICB and iron enrichment at the bottom of the outer core.

Map showing bottom topography of the Pacific Continental Margin, Cape Mendocino to Point Conception

USGS Publications Warehouse

Chase, T.E.; Wilde, Pat; Normark, W.R.; Evenden, G.I.; Miller, C.P.; Seekins, B.A.; Young, J. D.; Grim, M.S.; Lief, C.J.

1992-01-01

Wilde, Pat, Chase, T.E., Holmes, M.L., Normark, W.R., Thomas, J.A., McCulloch, D.S., and Kulm, L.D., 1978, Oceanographic data off northern California-southern Oregon 40° to 43° North including the Gorda Deep Sea Fan: Berkeley, University of California, Lawrence Berkeley Laboratory Publication 251, scale 1:815,482 at 42° latitude.

The Moving Sands of Lobo Vallis

NASA Image and Video Library

2018-04-02

NASA's Mars Reconnaissance Orbiter shows bright ripples line the topography in this region, formed within a past climate. Dark dunes and sand streaks (composed of basaltic sand) have moved and filled lower areas, pushed by more recent winds from the top towards the bottom of this image. Lobo Vallis is named for a river on the Ivory Coast. https://photojournal.jpl.nasa.gov/catalog/PIA22346

Quantitative evaluation of water bodies dynamic by means of thermal infrared and multispectral surveys on the Venetian lagoon

NASA Technical Reports Server (NTRS)

Alberotanza, L.; Lechi, G. M.

1977-01-01

Surveys employing a two channel Daedalus infrared scanner and multispectral photography were performed. The spring waning tide, the velocity of the water mass, and the types of suspended matter were among the topics studied. Temperature, salinity, sediment transport, and ebb stream velocity were recorded. The bottom topography was correlated with the dynamic characteristics of the sea surface.

Tidal Dynamics and Mixing Over Steep Topography

DTIC Science & Technology

1994-06-01

California continental shelf have been observed at several locations (Huthnance, 1989). Shea and Broenkow (1982) observed large 33 tidally related...enhanced transport inside the canyon (Huthnance, 1989). This type of pressure gradient supports the conceptual model proposed by Shea and Broenkow (1982...predicted an enhanced internal tide up-canyon and near the bottom, verified by observations of strong internal tides by Shea and Broenkow (1982) at

Geothermal heat flux in the Amundsen Sea sector of West Antarctica: New insights from temperature measurements, depth to the bottom of the magnetic source estimation, and thermal modeling

NASA Astrophysics Data System (ADS)

Dziadek, R.; Gohl, K.; Diehl, A.; Kaul, N.

2017-07-01

Focused research on the Pine Island and Thwaites glaciers, which drain the West Antarctic Ice Shelf (WAIS) into the Amundsen Sea Embayment (ASE), revealed strong signs of instability in recent decades that result from variety of reasons, such as inflow of warmer ocean currents and reverse bedrock topography, and has been established as the Marine Ice Sheet Instability hypothesis. Geothermal heat flux (GHF) is a poorly constrained parameter in Antarctica and suspected to affect basal conditions of ice sheets, i.e., basal melting and subglacial hydrology. Thermomechanical models demonstrate the influential boundary condition of geothermal heat flux for (paleo) ice sheet stability. Due to a complex tectonic and magmatic history of West Antarctica, the region is suspected to exhibit strong heterogeneous geothermal heat flux variations. We present an approach to investigate ranges of realistic heat fluxes in the ASE by different methods, discuss direct observations, and 3-D numerical models that incorporate boundary conditions derived from various geophysical studies, including our new Depth to the Bottom of the Magnetic Source (DBMS) estimates. Our in situ temperature measurements at 26 sites in the ASE more than triples the number of direct GHF observations in West Antarctica. We demonstrate by our numerical 3-D models that GHF spatially varies from 68 up to 110 mW m-2.

Climate refugia: The physical, hydrologic and disturbance basis

NASA Astrophysics Data System (ADS)

Holden, Z. A.; Maneta, M. P.; Forthofer, J.

2015-12-01

Projected changes in global climate and associated shifts in vegetation have increased interest in understanding species persistence at local scales. We examine the climatic and physical factors that could mediate changes in the distribution of vegetation in regions of complex topography. Using massive networks of low-cost temperature and humidity sensors, we developed topographically-resolved daily historical gridded temperature data for the US Northern Rockies. We used the WindNinja model to create daily historical wind speed maps across the same domain. Using a spatially distributed ecohydrology model (ECH2O) we examine separately the sensitivity of modeled evapotranspiration and soil moisture to wind, radiation, soil properties, minimum temperature and humidity. A suite of physical factors including lower wind speeds, cold air drainage, solar shading and increased soil depth reduce evapotranspiration and increase late season moisture availability in valley bottoms. Evapotranspiration shows strong sensitivity to spatial variability in surface wind speed, suggesting that sheltering effects from winds may be an important factor contributing to mountain refugia. Fundamental to our understanding of patterns of vegetation change is the role of stand-replacing wildfires, which modify the physical environment and subsequent patterns of species persistence and recruitment. Using satellite-derived maps of burn severity for recent fires in the US Northern Rockies we examined relationships between wind speed, cold air drainage potential and soil depth and the occurrence of unburned and low severity fire. Severe fire is less likely to occur in areas with high cold air drainage potential and low wind speeds, suggesting that sheltered valley bottoms have mediated the severity of recent wildfires. Our finding highlight the complex physical mechanisms by which mountain weather and climate mediate fire-induced vegetation changes in the US Northern Rocky Mountains.

Linking benthic hydrodynamics and cold-water coral occurrences: A high-resolution model study at three cold-water coral provinces in the NE Atlantic

NASA Astrophysics Data System (ADS)

Mohn, Christian; Rengstorf, Anna; White, Martin; Duineveld, Gerard; Mienis, Furu; Soetaert, Karline; Grehan, Anthony

2014-03-01

Observations from numerous cold-water coral locations in the NE Atlantic show energetic near-bottom flow dynamics along the European continental margin at individual coral mounds and mound clusters. Dynamics are largely controlled by tide-topography interaction generating and enhancing periodic motions such as trapped waves, freely propagating internal tides and internal hydraulic jumps. In this study, linkages between key abiotic parameters and cold water coral occurrences are explored across entire cold-water coral mound provinces using an integrated modelling and observational approach. The 3-D ocean circulation model ROMS-AGRIF was applied to simulate near-bottom hydrodynamic conditions at three provinces in the NE Atlantic (Logachev mounds, Arc mounds and Belgica mounds) adopting a nested model setup with a central grid resolution of 250 m. Simulations were carried out with a focus on accurate high-resolution topography and tidal forcing. The central model bathymetry was taken from high-resolution INSS (Irish National Seabed Survey) seafloor mapping data. The model was integrated over a full one-year reference period starting from the 1st January 2010. Interannual variability was not considered. Tidal forcing was obtained from a global solution of the Oregon State University (OSU) inverse tidal model. Modelled fields of benthic currents were validated against available independent in situ observations. Coral assemblage patterns (presence and absence locations) were obtained from benthic surveys of the EU FP7 CoralFISH programme and supplemented by data from additional field surveys. Modelled near-bottom currents, temperature and salinity were analysed for a 1-month subset (15th April to 15th May 2010) corresponding to the main CoralFISH survey period. The model results show intensified near-bottom currents in areas where living corals are observed by contrast with coral absence and random background locations. Instantaneous and time-mean current speeds at mound clusters in the Logachev province exceeded typical values in non-coral areas by up to a factor of three. Currents at cold-water coral locations in the Arc and Belgica mound provinces were less energetic, but still elevated compared to non-coral locations. An analysis of dynamical processes associated with oscillatory flow interacting with topography suggests that these motions are locally important food supply mechanisms to cold-water corals by promoting large amplitude local vertical mixing and organic matter fluxes. It is shown that their presence varies considerably between provinces based on the interplay of topographic slope, flow magnitude and ambient stratification.

Linking aboveground net primary productivity to soil carbon and dissolved organic carbon in complex terrain

Treesearch

F.S. Peterson; K. Lajtha

2013-01-01

Factors influencing soil organic matter (SOM) stabilization and dissolved organic carbon (DOC) content in complex terrain, where vegetation, climate, and topography vary over the scale of a few meters, are not well understood. We examined the spatial correlations of lidar and geographic information system-derived landscape topography, empirically measured soil...

Effects of Topography-driven Micro-climatology on Evaporation

NASA Astrophysics Data System (ADS)

Adams, D. D.; Boll, J.; Wagenbrenner, N. S.

2017-12-01

The effects of spatial-temporal variation of climatic conditions on evaporation in micro-climates are not well defined. Current spatially-based remote sensing and modeling for evaporation is limited for high resolutions and complex topographies. We investigated the effect of topography-driven micro-climatology on evaporation supported by field measurements and modeling. Fourteen anemometers and thermometers were installed in intersecting transects over the complex topography of the Cook Agronomy Farm, Pullman, WA. WindNinja was used to create 2-D vector maps based on recorded observations for wind. Spatial analysis of vector maps using ArcGIS was performed for analysis of wind patterns and variation. Based on field measurements, wind speed and direction show consequential variability based on hill-slope location in this complex topography. Wind speed and wind direction varied up to threefold and more than 45 degrees, respectively for a given time interval. The use of existing wind models enables prediction of wind variability over the landscape and subsequently topography-driven evaporation patterns relative to wind. The magnitude of the spatial-temporal variability of wind therefore resulted in variable evaporation rates over the landscape. These variations may contribute to uneven crop development patterns observed during the late growth stages of the agricultural crops at the study location. Use of hill-slope location indexes and appropriate methods for estimating actual evaporation support development of methodologies to better define topography-driven heterogeneity in evaporation. The cumulative effects of spatially-variable climatic factors on evaporation are important to quantify the localized water balance and inform precision farming practices.

Asymmetric three-dimensional topography over mantle plumes.

PubMed

Burov, Evgueni; Gerya, Taras

2014-09-04

The role of mantle-lithosphere interactions in shaping surface topography has long been debated. In general, it is supposed that mantle plumes and vertical mantle flows result in axisymmetric, long-wavelength topography, which strongly differs from the generally asymmetric short-wavelength topography created by intraplate tectonic forces. However, identification of mantle-induced topography is difficult, especially in the continents. It can be argued therefore that complex brittle-ductile rheology and stratification of the continental lithosphere result in short-wavelength modulation and localization of deformation induced by mantle flow. This deformation should also be affected by far-field stresses and, hence, interplay with the 'tectonic' topography (for example, in the 'active/passive' rifting scenario). Testing these ideas requires fully coupled three-dimensional numerical modelling of mantle-lithosphere interactions, which so far has not been possible owing to the conceptual and technical limitations of earlier approaches. Here we present new, ultra-high-resolution, three-dimensional numerical experiments on topography over mantle plumes, incorporating a weakly pre-stressed (ultra-slow spreading), rheologically realistic lithosphere. The results show complex surface evolution, which is very different from the smooth, radially symmetric patterns usually assumed as the canonical surface signature of mantle upwellings. In particular, the topography exhibits strongly asymmetric, small-scale, three-dimensional features, which include narrow and wide rifts, flexural flank uplifts and fault structures. This suggests a dominant role for continental rheological structure and intra-plate stresses in controlling dynamic topography, mantle-lithosphere interactions, and continental break-up processes above mantle plumes.

Map showing bottom topography of the Pacific Continental Margin, Strait of Juan de Fuca to Cape Mendocino

USGS Publications Warehouse

Grim, M.S.; Chase, T.E.; Evenden, G.I.; Holmes, M.L.; Normark, W.R.; Wilde, Pat; Fox, C.J.; Lief, C.J.; Seekins, B.A.

1992-01-01

Wilde, Pat, Chase, T.E., Holmes, M.L., Normark, W.R., Thomas, J.A., McCulloch, D.S., and Kulm, L.D., 1978, Oceanographic data off northern California-southern Oregon 40° to 43° North including the Gorda Deep Sea Fan: Berkeley, University of California, Lawrence Berkeley Laboratory Publication 251, scale 1:815,482 at 42° latitude.

Development of the Navy’s Next-Generation Nonhydrostatic Modeling System

DTIC Science & Technology

2013-09-30

e.g. surface roughness, land- sea mask, surface albedo ) are needed by physical parameterizations. The surface values will be read and interpolated...characteristics (e.g. albedo , surface roughness) is now available to the model during the initialization stage. We have added infrastructure to the...six faces (Fig 3). 4 Figure 3: Topography (top left, in meters), surface roughness (top right, in meters), albedo (bottom left, no units

Deep-water bedforms induced by refracting Internal Solitary Waves

NASA Astrophysics Data System (ADS)

Falcini, Federico; Droghei, Riccardo; Casalbore, Daniele; Martorelli, Eleonora; Mosetti, Renzo; Sannino, Gianmaria; Santoleri, Rosalia; Latino Chiocci, Francesco

2017-04-01

Subaqueous bedforms (or sand waves) are typically observed in those environments that are exposed to strong currents, characterized by a dominant unidirectional flow. However, sand-wave fields may be also observed in marine environments where no such current exists; the physical processes driving their formation are enigmatic or not well understood. We propose that internal solitary waves (ISWs), induced by tides, can produce an effective, unidirectional boundary flow filed that forms asymmetric sand waves. We test this idea by examining a sand-wave field off the Messina Strait, where we hypothesize that ISWs formed at the interface between intermediate and surface waters are refracted by topography. Hence, we argue that the deflected pattern (i.e., the depth-dependent orientation) of the sand-wave field is due to refraction of such ISWs. Combining field observations and numerical modelling, we show that ISWs can account for three key features: ISWs produce fluid velocities capable of mobilizing bottom sediments; the predicted refraction pattern resulting from the interaction of ISWs with bottom topography matches the observed deflection of the sand waves; and predicted migration rates of sand waves match empirical estimates. This work shows how ISWs may contribute to sculpting the structure of continental margins and it represents a promising link between the geological and oceanographic communities.

Analytical and numerical solution for wave reflection from a porous wave absorber

NASA Astrophysics Data System (ADS)

Magdalena, Ikha; Roque, Marian P.

2018-03-01

In this paper, wave reflection from a porous wave absorber is investigated theoretically and numerically. The equations that we used are based on shallow water type model. Modification of motion inside the absorber is by including linearized friction term in momentum equation and introducing a filtered velocity. Here, an analytical solution for wave reflection coefficient from a porous wave absorber over a flat bottom is derived. Numerically, we solve the equations using the finite volume method on a staggered grid. To validate our numerical model, comparison of the numerical reflection coefficient is made against the analytical solution. Further, we implement our numerical scheme to study the evolution of surface waves pass through a porous absorber over varied bottom topography.

Topoclimatological and snowhydrological survey of Switzerland

NASA Technical Reports Server (NTRS)

Winiger, M. (Principal Investigator)

1980-01-01

The author has identified the following significant results. Low temperature zones depend on the topography and the terrain coverage type (besides the meteorological situation). The usual pattern of cold zones at the bottom of the valleys, warmer belts along the valley slopes, and cold mountain tops is modified by the terrain coverage type. Rural and forested areas normally have different surface temperatures, but along a vertical profile the temperature decrease (or increase) is often of the same order of magnitude. Because there is also a close correlation between the topography and terrain coverage (high percentage of forested areas at the valley slopes up to the timber line, much less along the valley floors), the surface temperature of the warm slope zone is increased compared to a valley profile with uniform coverage.

Distinct cortical circuit mechanisms for complex forelimb movement and motor map topography.

PubMed

Harrison, Thomas C; Ayling, Oliver G S; Murphy, Timothy H

2012-04-26

Cortical motor maps are the basis of voluntary movement, but they have proven difficult to understand in the context of their underlying neuronal circuits. We applied light-based motor mapping of Channelrhodopsin-2 mice to reveal a functional subdivision of the forelimb motor cortex based on the direction of movement evoked by brief (10 ms) pulses. Prolonged trains of electrical or optogenetic stimulation (100-500 ms) targeted to anterior or posterior subregions of motor cortex evoked reproducible complex movements of the forelimb to distinct positions in space. Blocking excitatory cortical synaptic transmission did not abolish basic motor map topography, but the site-specific expression of complex movements was lost. Our data suggest that the topography of movement maps arises from their segregated output projections, whereas complex movements evoked by prolonged stimulation require intracortical synaptic transmission. Copyright © 2012 Elsevier Inc. All rights reserved.

Wet-spinning fabrication of shear-patterned alginate hydrogel microfibers and the guidance of cell alignment

PubMed Central

Yang, You; Sun, Jing; Liu, Xiaolu; Guo, Zhenzhen; He, Yunhu; Wei, Dan; Zhong, Meiling; Guo, Likun; Zhang, Xingdong

2017-01-01

Abstract Native tissue is naturally comprised of highly-ordered cell-matrix assemblies in a multi-hierarchical way, and the nano/submicron alignment of fibrous matrix is found to be significant in supporting cellular functionalization. In this study, a self-designed wet-spinning device appended with a rotary receiving pool was used to continuously produce shear-patterned hydrogel microfibers with aligned submicron topography. The process that the flow-induced shear force reshapes the surface of hydrogel fiber into aligned submicron topography was systematically analysed. Afterwards, the effect of fiber topography on cellular longitudinal spread and elongation was investigated by culturing rat neuron-like PC12 cells and human osteosarcoma MG63 cells with the spun hydrogel microfibers, respectively. The results suggested that the stronger shear flow force would lead to more distinct aligned submicron topography on fiber surface, which could induce cell orientation along with fiber axis and therefore form the cell-matrix dual-alignment. Finally, a multi-hierarchical tissue-like structure constructed by dual-oriented cell-matrix assemblies was fabricated based on this wet-spinning method. This work is believed to be a potentially novel biofabrication scheme for bottom-up constructing of engineered linear tissue, such as nerve bundle, cortical bone, muscle and hepatic cord. PMID:29026644

Acoustic water bottom investigation with a remotely operated watercraft survey system

NASA Astrophysics Data System (ADS)

Yamasaki, Shintaro; Tabusa, Tomonori; Iwasaki, Shunsuke; Hiramatsu, Masahiro

2017-12-01

This paper describes a remotely operated investigation system developed by combining a modern leisure-use fish finder and an unmanned watercraft to survey water bottom topography and other data related to bottom materials. Current leisure-use fish finders have strong depth sounding capabilities and can provide precise sonar images and bathymetric information. Because these sonar instruments are lightweight and small, they can be used on unmanned small watercraft. With the developed system, an operator can direct the heading of an unmanned watercraft and monitor a PC display showing real-time positioning information through the use of onboard equipment and long-distance communication devices. Here, we explain how the system was developed and demonstrate the use of the system in an area of submerged woods in a lake. The system is low cost, easy to use, and mobile. It should be useful in surveying areas that have heretofore been hard to investigate, including remote, small, and shallow lakes, for example, volcanic and glacial lakes.

Characterization of structural and electrostatic complexity in pentacene thin films by scanning probe microscopy

NASA Astrophysics Data System (ADS)

Puntambekar, Kanan Prakash

The advancement of organic electronics for applications in solar energy conversion, printed circuitry, displays, and solid-state lighting depends upon optimization of structure and properties for a variety of organic semiconductor interfaces. Organic semiconductor/insulator (O/I) and organic-metal (O/M) interfaces, in particular, are critical to the operation of organic thin film transistors (OTFTs) currently being developed for printed flexible electronics. Scanning probe microscopy (SPM) is a powerful tool to isolate and characterize the bottlenecks to charge transport at these interfaces. This thesis establishes a direct correlation between the structural disorder and electrical complexity at these interfaces, using various SPM based methods and discusses the implications of such complexity on device performance. To examine the O/M interfaces, surface potentials of operating pentacene TFTs with two different contact geometries (bottom or top) were mapped by Kelvin probe force microscopy (KFM). The surface potential distribution was used to isolate the potential drops at the source and drain contacts. Simultaneously obtained topography and surface potential maps elucidated the correlation between the morphology and contact resistance at the O/M interface; the bottom contact TFTs were observed to be contact limited at large gate voltages, while the top contact TFTs were not contact limited. A direct correlation between structural defects and electric potential variations at the pentacene and silicon dioxide, a common insulator, is demonstrated. Lateral force microscopy (LFM) generates striking images of the polycrystalline microstructure of a monolayer thick pentacene film, allowing clear visualization of the grain boundary network. Further more, surface potential wells localized at the grain boundaries were observed by KFM, suggesting that the grain boundaries may serve as charge carrier (hole) traps. Line dislocations were also revealed in the second monolayer by chemical etching and SPM and produce strong variations in the surface potential that must affect the interfacial charge conductance. Structural disorder at the O/I and O/M interfaces degrades both injection and transport of charge, and therefore needs to be minimized. Thus both visualization and correlation of structural and electrical complexity at these interfaces have important implications for understanding electrical transport in OTFTs and for defining strategies to improve device performance.

Depth to Curie temperature or magnetic sources bottom in the Lesser Antilles Arc volcanic area

NASA Astrophysics Data System (ADS)

Gailler, Lydie-Sarah; Martelet, Guillaume; Thinon, Isabelle; Münch, Philippe; Arcay, Diane

2015-04-01

In the continuation of the innovative study carried out at the scale of La Réunion Island to generalize Curie Point Depth (CPD) determinations at the scale of oceanic volcanic islands, we present here a similar work at the scale of the Lesser Antilles Arc. Assuming that magnetic anomalies are concentrated within the oceanic crust and using the growing assumption of a magnetized upper mantle, the Curie depth should become deeper as the oceanic lithosphere becomes older (i.e. thicker). We use the magnetic anomaly map computed by Gailler et al. (2013), completed and extended with the global Earth Magnetic Anomaly Grid (EMAG2) (Maus et al., 2007). The calculated magnetic sources bottom lies at depths between 18 and 32 km and exhibits a complex topography, presumably caused by the combination of various magmatic and tectonic crustal structures in this complex subduction context. The correlations between our depth to magnetic sources bottom and the large scale bathymetric and geophysical studies provide an interesting overview of the Lesser Antilles Arc structuring. The Inner Arc is mainly associated with a deepening of the depth to magnetic sources bottom. On the contrary, a huge doming appears along the central Lesser Antilles Arc, consistent with the seismic imaging (Kopp et al., 2011). This uprise of our calculated magnetic surface extents southeastern to the Guadeloupe Island in the direction of the Tiburon Ridge following the abnormal transverse component of the subduction in the N130°E direction defined by Gailler et al. (2013). A strong lateral narrowing of this doming is evidenced southern of Dominique Island where the two arcs converge. In this central area, the averaged depth of the magnetic sources bottom is also larger than expected in the case of classical oceanic crust. This is in agreement with previous interpretation of an original oceanic crust thickened by deep magmatic processes and underplating prior to the evolution of the Lesser Antilles Arc (Diebold, 2009). To the NE, the five main axis of deformation imaged from geophysical and bathymetric studies are well correlated with the larger bulged area of the magnetic sources bottom which also seems to underline the large scale deformation and faulting of the Outer arc. Along this latter, our map is correlated with the accretionary prism, the subduction trench, and the large scale gravity scheme. We also perform 2D thermo-mechanical simulations of the Lesser Antilles subduction zone to model the thermal structure of the fore-arc/arc domain at steady-state. Water transfers associated to slab dehydration and overlying rock hydration are modeled, including a simple hydrous strength weakening law. Simulations show that asthenospheric flows are strongly enhanced in the hydrated mantle wedge, yielding a significant reheating of the fore-arc domain, consistent with what is suggested by magnetic data.

Effects of bottom water dissolved oxygen variability on copper and lead fractionation in the sediments across the oxygen minimum zone, western continental margin of India.

PubMed

Chakraborty, Parthasarathi; Chakraborty, Sucharita; Jayachandran, Saranya; Madan, Ritu; Sarkar, Arindam; Linsy, P; Nath, B Nagender

2016-10-01

This study describes the effect of varying bottom-water oxygen concentration on geochemical fractionation (operational speciation) of Cu and Pb in the underneath sediments across the oxygen minimum zone (Arabian Sea) in the west coast of India. Both, Cu and Pb were redistributed among the different binding phases of the sediments with changing dissolved oxygen level (from oxic to hypoxic and close to suboxic) in the bottom water. The average lability of Cu-sediment complexes gradually decreased (i.e., stability increased) with the decreasing dissolved oxygen concentrations of the bottom water. Decreasing bottom-water oxygen concentration increased Cu association with sedimentary organic matter. However, Pb association with Fe/Mn-oxyhydroxide phases in the sediments gradually decreased with the decreasing dissolved oxygen concentration of the overlying bottom water (due to dissolution of Fe/Mn oxyhydroxide phase). The lability of Pb-sediment complexes increased with the decreasing bottom-water oxygen concentration. This study suggests that bottom-water oxygen concentration is one of the key factors governing stability and lability of Cu and Pb complexes in the underneath sediment. Sedimentary organic matter and Fe/Mn oxyhydroxide binding phases were the major hosting phases for Cu and Pb respectively in the study area. Increasing lability of Pb-complexes in bottom sediments may lead to positive benthic fluxes of Pb at low oxygen environment. Copyright © 2016 Elsevier B.V. All rights reserved.

Research on the Safety of Fishing Vessels Moored in Typhoon Weather

NASA Astrophysics Data System (ADS)

Zhang, Xinquan; Ai, Wanzheng; Dong, Hongcang

2018-01-01

As the first country of the global fishing, and year-round infestation by Typhoon in China, led to casualties among fishermen, significant economic losses, in order to better protect the safety of fishing boats in the Typhoon weather anchor, the paper around the anchorage of water depth, bottom topography, wind, wave and current ways of anchoring, to discuss research, Provide a reference for the mooring of boats better resistance and learn from.

Species-environment relationships and potential for distribution modelling in coastal waters

NASA Astrophysics Data System (ADS)

Snickars, M.; Gullström, M.; Sundblad, G.; Bergström, U.; Downie, A.-L.; Lindegarth, M.; Mattila, J.

2014-01-01

Due to increasing pressure on the marine environment there is a growing need to understand species-environment relationships. To provide background for prioritising among variables (predictors) for use in distribution models, the relevance of predictors for benthic species was reviewed using the coastal Baltic Sea as a case-study area. Significant relationships for three response groups (fish, macroinvertebrates, macrovegetation) and six predictor categories (bottom topography, biotic features, hydrography, wave exposure, substrate and spatiotemporal variability) were extracted from 145 queried peer-reviewed field-studies covering three decades and six subregions. In addition, the occurrence of interaction among predictors was analysed. Hydrography was most often found in significant relationships, had low level of interaction with other predictors, but also had the most non-significant relationships. Depth and wave exposure were important in all subregions and are readily available, increasing their applicability for cross-regional modelling efforts. Otherwise, effort to model species distributions may prove challenging at larger scale as the relevance of predictors differed among both response groups and regions. Fish and hard bottom macrovegetation have the largest modelling potential, as they are structured by a set of predictors that at the same time are accurately mapped. A general importance of biotic features implies that these need to be accounted for in distribution modelling, but the mapping of most biotic features is challenging, which currently lowers the applicability. The presence of interactions suggests that predictive methods allowing for interactive effects are preferable. Detailing these complexities is important for future distribution modelling.

Sedimentary environments within a glaciated estuarine-inner shelf system: Boston Harbor and Massachusetts Bay

USGS Publications Warehouse

Knebel, H.J.

1993-01-01

Three modern sedimentary environments have been identified and mapped across the glaciated Boston Harbor estuary and adjacent inner shelf of Massachusetts Bay by means of an extensive set of sidescan sonar records and supplemental bathymetric, sedimentary, subbottom and bottom-current data. 1. (1) Environments of erosion and nondeposition appear on the sonographs either as patterns with isolated reflections (caused by outcrops of bedrock, glacial drift, and coastal plain rocks) or as patterns of strong backscatter (caused by coarse-grained lag deposits). Sediments in these environments range from boulder fields to gravelly sands with megaripples. Inside the harbor, areas of erosion or nondeposition are found primarily near mainland and insular shores and within constricted tidal channels, whereas, on the shelf, they are present over extensive areas of hummocky topography near the coast and atop local bathymetric highs offshore. 2. (2) Environments of sediment reworking are characterized on the sonographs by patterns with patches of strong to weak backscatter caused by a combination of erosional and depositional processes. These environments have diverse grain sizes that range from sandy gravels to muds. Within the harbor, the locations of reworked sediments are uncorrelated with the bottom topography, but, on the shelf, they are found on the lower flanks of bathymetric highs, within broad lows and in relatively deep water (30-50 m). 3. (3) Environments of deposition are depicted on the sonographs as uniform patterns of weak backscatter. These areas contain relatively fine-grained muddy sands and muds. Inside the harbor, depositional environments are found over extensive subtidal flats and within sheltered depressions, whereas, on the shelf, they are restricted to broad lows mainly in deep water. The extreme patchiness of modern sedimentary environments within the Boston Harbor-Massachusetts Bay system reflects the interaction between the irregular bottom topography and both geologic and oceanographic processes. The estuarine part of the system is an effective trap for fine-grained detritus because of its protected nature, low wave climate, and large supply of sediments. The open shelf, however, is largely mantled by winnowed and sorted sediments as a result of erosion during past sea-level fluctuations, sediment resuspension and transport by modern waves and currents, and a spatially variable supply of fine-grained sediments.

Response of the South China Sea to Forcing by Tropical Cyclone Ernie (1996)

DTIC Science & Technology

1998-03-01

complicated. Wide continental shelves appear in the northwest and southwest of the basin and steep slopes in the central portion, framing a deep, bowl...bottom topography of the SCS basin provides a favorable condition for the formation of anticyclonic eddies in the central SCS during the spring. From...cyclone is produced. This cyclonic wind stress then generates Ekman upwelling in the central basin and the formation of a cold pool. Again, through

Integrated Modeling and Analysis of Physical Oceanographic and Acoustic Processes

DTIC Science & Technology

2014-09-30

dependence of the energy conversion on the ratio of the IW beam slope to the topographic slope, SIW /Stopo. The top panel of Fig. 8 illustrates that...in the abyssal oceans, where typically SIW /Stopo > 1 for tall seamounts and ridges, the entire bottom topography contributes to the generation of...internal waves. In contrast, for (a) (b) 18 moderate ocean depths (say less than 4 km), where typically SIW /Stopo < 1 for seamounts and ridges, the

The role of Internal Solitary Waves on deep-water sedimentary processes: the case of up-slope migrating sediment waves off the Messina Strait.

PubMed

Droghei, R; Falcini, F; Casalbore, D; Martorelli, E; Mosetti, R; Sannino, G; Santoleri, R; Chiocci, F L

2016-11-03

Subaqueous, asymmetric sand waves are typically observed in marine channel/canyon systems, tidal environments, and continental slopes exposed to strong currents, where they are formed by current shear resulting from a dominant unidirectional flow. However, sand-wave fields may be readily observed in marine environments where no such current exists; the physical processes driving their formation are enigmatic or not well understood. We propose that internal solitary waves (ISWs) induced by tides can produce an effective, unidirectional boundary "current" that forms asymmetric sand waves. We test this idea by examining a sand-wave field off the Messina Strait, where we hypothesize that ISWs formed at the interface between intermediate and surface waters are refracted by topography. Hence, we argue that the deflected pattern (i.e., the depth-dependent orientation) of the sand-wave field is due to refraction of such ISWs. Combining field observations and numerical modelling, we show that ISWs can account for three key features: ISWs produce fluid velocities capable of mobilizing bottom sediments; the predicted refraction pattern resulting from the interaction of ISWs with bottom topography matches the observed deflection of the sand waves; and predicted migration rates of sand waves match empirical estimates. This work shows how ISWs may contribute to sculpting the structure of continental margins and it represents a promising link between the geological and oceanographic communities.

The role of Internal Solitary Waves on deep-water sedimentary processes: the case of up-slope migrating sediment waves off the Messina Strait

NASA Astrophysics Data System (ADS)

Droghei, R.; Falcini, F.; Casalbore, D.; Martorelli, E.; Mosetti, R.; Sannino, G.; Santoleri, R.; Chiocci, F. L.

2016-11-01

Subaqueous, asymmetric sand waves are typically observed in marine channel/canyon systems, tidal environments, and continental slopes exposed to strong currents, where they are formed by current shear resulting from a dominant unidirectional flow. However, sand-wave fields may be readily observed in marine environments where no such current exists; the physical processes driving their formation are enigmatic or not well understood. We propose that internal solitary waves (ISWs) induced by tides can produce an effective, unidirectional boundary “current” that forms asymmetric sand waves. We test this idea by examining a sand-wave field off the Messina Strait, where we hypothesize that ISWs formed at the interface between intermediate and surface waters are refracted by topography. Hence, we argue that the deflected pattern (i.e., the depth-dependent orientation) of the sand-wave field is due to refraction of such ISWs. Combining field observations and numerical modelling, we show that ISWs can account for three key features: ISWs produce fluid velocities capable of mobilizing bottom sediments; the predicted refraction pattern resulting from the interaction of ISWs with bottom topography matches the observed deflection of the sand waves; and predicted migration rates of sand waves match empirical estimates. This work shows how ISWs may contribute to sculpting the structure of continental margins and it represents a promising link between the geological and oceanographic communities.

Patterned basal seismicity shows sub-ice stream bedforms

NASA Astrophysics Data System (ADS)

Barcheck, C. G.; Tulaczyk, S. M.; Schwartz, S. Y.

2017-12-01

Patterns in seismicity emanating from the bottom of fast-moving ice streams and glaciers may indicate localized patches of higher basal resistance— sometimes called 'sticky spots', or otherwise varying basal properties. These seismogenic basal areas resist an unknown portion of the total driving stress of the Whillans Ice Plain (WIP), in West Antarctica, but may play an important role in the WIP stick-slip cycle and ice stream slowdown. To better understand the mechanism and importance of basal seismicity beneath the WIP, we analyze seismic data collected by a small aperture (< 3km) network of 8 surface and 5 borehole seismometers installed in the main central sticky spot of the WIP. We use a network beamforming technique to detect and roughly locate thousands of small (magnitude < 0), local basal micro-earthquakes in Dec 2014, and we compare the resulting map of seismicity to ice bottom depth measured by airborne radar. The number of basal earthquakes per area within the network is spatially heterogeneous, but a pattern of two 400m wide streaks of high seismicity rates is evident, with >50-500 earthquakes detected per 50x50m grid cell in 2 weeks. These seismically active streaks are elongated approximately in the ice flow direction with a spacing of 750m. Independent airborne radar measurements of ice bottom depth from Jan 2013 show a low-amplitude ( 5m) undulation in the basal topography superposed on a regional gradient in ice bottom depth. The flow-perpendicular wavelength of these low-amplitude undulations is comparable to the spacing of the high seismicity bands, and the streaks of high seismicity intersect local lows in the undulating basal topography. We interpret these seismic and radar observations as showing seismically active sub-ice stream bedforms that are low amplitude and elongated in the direction of ice flow, comparable to the morphology of mega scale glacial lineations (MSGLs), with high basal seismicity rates observed in the MSGL troughs. These results have implications for understanding the formation mechanism of MSGLS and well as understanding the interplay between basal topographic roughness, spatially varying basal till and hydrologic properties, basal resistance to fast ice flow, and ice stream stick-slip.

Three-dimensional curved grid finite-difference modelling for non-planar rupture dynamics

NASA Astrophysics Data System (ADS)

Zhang, Zhenguo; Zhang, Wei; Chen, Xiaofei

2014-11-01

In this study, we present a new method for simulating the 3-D dynamic rupture process occurring on a non-planar fault. The method is based on the curved-grid finite-difference method (CG-FDM) proposed by Zhang & Chen and Zhang et al. to simulate the propagation of seismic waves in media with arbitrary irregular surface topography. While keeping the advantages of conventional FDM, that is computational efficiency and easy implementation, the CG-FDM also is flexible in modelling the complex fault model by using general curvilinear grids, and thus is able to model the rupture dynamics of a fault with complex geometry, such as oblique dipping fault, non-planar fault, fault with step-over, fault branching, even if irregular topography exists. The accuracy and robustness of this new method have been validated by comparing with the previous results of Day et al., and benchmarks for rupture dynamics simulations. Finally, two simulations of rupture dynamics with complex fault geometry, that is a non-planar fault and a fault rupturing a free surface with topography, are presented. A very interesting phenomenon was observed that topography can weaken the tendency for supershear transition to occur when rupture breaks out at a free surface. Undoubtedly, this new method provides an effective, at least an alternative, tool to simulate the rupture dynamics of a complex non-planar fault, and can be applied to model the rupture dynamics of a real earthquake with complex geometry.

Topographic variations of water supply and plant hydraulics in a mountainous forest

NASA Astrophysics Data System (ADS)

Tai, X.; Mackay, D. S.; Ewers, B. E.; Parsekian, A.; Sperry, J.; Beverly, D.; Speckman, H. N.; Ohara, N.; Fantello, N.; Kelleners, T.; Fullhart, A. T.

2017-12-01

How plants respond to variable local water supply in complex soil-topography systems is not clear although critical. This has been attributed to a lack of integrated models that can resolve relevant hydrological and physiological mechanisms and intensive field monitoring to inform/evaluate such a model. This research addresses these knowledge gaps by leveraging a newly developed distributed plant hydraulics model, ParFlow-TREES, and detailed geophysical and physiological measurements. Observations of sap flow, leaf water potentials, micrometeorology, and electrical resistivity tomography (ERT) are combined with the model to examine the key mechanisms affecting the spatial distribution of soil water and tree water stress. Modeling results showed higher soil water condition at bottom of the hillslope on average, corroborating the ERT-derived soil moisture observations. Hydraulic traits are critical to capture the sap flux dynamics of species with contrasting leaf water potential regulation strategies and heterogeneous soil drying at different hillslope positions. These results suggested the integrated effect of topography and plants on the evolvement of soil moisture distribution. Furthermore, sensitivity analysis demonstrated the importance of using distributed observations to validate/calibrate distributed models. Focusing on lumped variables or only one particular variable might give misleading conclusions. Co-located observations improve the characterization of plant traits and local living environment, providing key information needed as a first step in resolving the form and function of the critical zone from bedrock to atmosphere. We will discuss the broader implications and potential applications of this intensive data-model comparison at other sites and greater spatial extent.

Modelling wetting and drying effects over complex topography

NASA Astrophysics Data System (ADS)

Tchamen, G. W.; Kahawita, R. A.

1998-06-01

The numerical simulation of free surface flows that alternately flood and dry out over complex topography is a formidable task. The model equation set generally used for this purpose is the two-dimensional (2D) shallow water wave model (SWWM). Simplified forms of this system such as the zero inertia model (ZIM) can accommodate specific situations like slowly evolving floods over gentle slopes. Classical numerical techniques, such as finite differences (FD) and finite elements (FE), have been used for their integration over the last 20-30 years. Most of these schemes experience some kind of instability and usually fail when some particular domain under specific flow conditions is treated. The numerical instability generally manifests itself in the form of an unphysical negative depth that subsequently causes a run-time error at the computation of the celerity and/or the friction slope. The origins of this behaviour are diverse and may be generally attributed to:1. The use of a scheme that is inappropriate for such complex flow conditions (mixed regimes).2. Improper treatment of a friction source term or a large local curvature in topography.3. Mishandling of a cell that is partially wet/dry.In this paper, a tentative attempt has been made to gain a better understanding of the genesis of the instabilities, their implications and the limits to the proposed solutions. Frequently, the enforcement of robustness is made at the expense of accuracy. The need for a positive scheme, that is, a scheme that always predicts positive depths when run within the constraints of some practical stability limits, is fundamental. It is shown here how a carefully chosen scheme (in this case, an adaptation of the solver to the SWWM) can preserve positive values of water depth under both explicit and implicit time integration, high velocities and complex topography that may include dry areas. However, the treatment of the source terms: friction, Coriolis and particularly the bathymetry, are also of prime importance and must not be overlooked. Linearization with a combination of switching between explicit-implicit integration can overcome the stiffness of the friction and Coriolis terms and provide stable numerical integration. The treatment of the bathymetry source term is much more delicate. For cells undergoing a transient wet-dry process, the imposition of zero velocity stabilizes most of the approximations. However, this artificial zero velocity condition can be the cause of considerable error, especially when fast moving fronts are involved. Besides these difficulties linked with the internal position of the front within a cell versus the limited resolution of a numerical grid, it appears that the second derivative that defines whether the bed is locally convex or concave is a key indicator for stability. A convex bottom may lead to unbounded solutions. It appears that this behaviour is not linked to the numerics (numerical scheme) but rather to the mathematical theory of the SWWM. These concerns about stability have taken precedence, until now, over the crucial and related question of accuracy, especially near a moving front, and how these possible inaccuracies at the leading edge may affect the solution at interior points within the domain.This paper presents an in depth, fully two-dimensional space analysis of the aforementioned problem that has not been addressed before. The purpose of the present communication is not to propose what could be viewed as a final solution, but rather to provide some key considerations that may reveal the ingredients and insight necessary for the development of accurate and robust solutions in the future.

Importance of dynamic topography in Himalaya-Tibetan plateau region

NASA Astrophysics Data System (ADS)

Ghosh, A.; Singh, S.

2017-12-01

Himalaya-Tibetan plateau region has the highest topography in the world. Various studies have been done to understand the mechanisms responsible for sustaining this high topography. However, the existence of dynamic topography in this region is still uncertain, though there have been some studies exploring the role of channel flow in lower crust leading to some topography. We investigated the role of radial mantle flow in this region by studying the relationship between geoid and topography. High geoid-to-topography ratios (GTR) were observed along the Himalayas suggesting deeper compensation mechanisms. However, further north, the geoid and topography relationship became a lot more complex as high as well as low GTR values were observed. The high GTR regions also coincided with area of high filtered free air gravity anomalies, indicating dynamic support. We also looked at the spectral components of gravity, geoid and topography, and calculated response functions to distinguish between different compensation mechanisms. We estimated the average elastic thickness of the whole region to be around 40 km from coherence and admittance studies. The GTR and admittance-coherence studies suggest deeper mass anomalies playing a role in supporting the topography along Himalayas and the area between Altyn Tagh and Kunlun faults.

On the ratio of dynamic topography and gravity anomalies in a dynamic Earth

NASA Astrophysics Data System (ADS)

Colli, L.; Ghelichkhan, S.; Bunge, H. P.

2016-12-01

Growing evidence from a variety of geologic indicators points to significant topography maintained convectively by viscous stresses in the mantle. However, while gravity is sensitive to dynamically supported topography, there are only small free-air gravity anomalies (<30 mGal) associated with Earth's long-wavelength topography. This has been used to suggest that surface heights computed assuming a complete isostatic equilibrium provide a good approximation to observed topography. Here we show that the apparent paradox is resolved by the well-established formalism of global, self-gravitating, viscously stratified Earth models. The models predict a complex relation between dynamic topography, mass, and gravity anomalies that is not summarized by a constant admittance—i.e., ratio of gravity anomalies to surface deflections—as one would infer from analytic flow solutions formulated in a half-space.

A method for surface topography measurement using a new focus function based on dual-tree complex wavelet transform

NASA Astrophysics Data System (ADS)

Li, Shimiao; Guo, Tong; Yuan, Lin; Chen, Jinping

2018-01-01

Surface topography measurement is an important tool widely used in many fields to determine the characteristics and functionality of a part or material. Among existing methods for this purpose, the focus variation method has proved high performance particularly in large slope scenarios. However, its performance depends largely on the effectiveness of focus function. This paper presents a method for surface topography measurement using a new focus measurement function based on dual-tree complex wavelet transform. Experiments are conducted on simulated defocused images to prove its high performance in comparison with other traditional approaches. The results showed that the new algorithm has better unimodality and sharpness. The method was also verified by measuring a MEMS micro resonator structure.

Topographic evolution of orogens: The long term perspective

NASA Astrophysics Data System (ADS)

Robl, Jörg; Hergarten, Stefan; Prasicek, Günther

2017-04-01

The landscape of mountain ranges reflects the competition of tectonics and climate, that build up and destroy topography, respectively. While there is a broad consensus on the acting processes, there is a vital debate whether the topography of individual orogens reflects stages of growth, steady-state or decay. This debate is fuelled by the million-year time scales hampering direct observations on landscape evolution in mountain ranges, the superposition of various process patterns and the complex interactions among different processes. In this presentation we focus on orogen-scale landscape evolution based on time-dependent numerical models and explore model time series to constrain the development of mountain range topography during an orogenic cycle. The erosional long term response of rivers and hillslopes to uplift can be mathematically formalised by the stream power and mass diffusion equations, respectively, which enables us to describe the time-dependent evolution of topography in orogens. Based on a simple one-dimensional model consisting of two rivers separated by a watershed we explain the influence of uplift rate and rock erodibility on steady-state channel profiles and show the time-dependent development of the channel - drainage divide system. The effect of dynamic drainage network reorganization adds additional complexity and its effect on topography is explored on the basis of two-dimensional models. Further complexity is introduced by coupling a mechanical model (thin viscous sheet approach) describing continental collision, crustal thickening and topography formation with a stream power-based landscape evolution model. Model time series show the impact of crustal deformation on drainage networks and consequently on the evolution of mountain range topography (Robl et al., in review). All model outcomes, from simple one-dimensional to coupled two dimensional models are presented as movies featuring a high spatial and temporal resolution. Robl, J., S. Hergarten, and G. Prasicek (in review), The topographic state of mountain ranges, Earth Science Reviews.

Characterization and migration of oil and solids in oily sludge during centrifugation.

PubMed

Wang, Jun; Han, Xu; Huang, Qunxing; Ma, Zengyi; Chi, Yong; Yan, Jianhua

2018-05-01

The migration behaviors of oil, water and solids in sludge during centrifugation were elaborated. Size distribution, surface topography and lypohydrophilic properties were studied in detail. The average size of solids was 61 μm in original sludge, 31 μm in upper layer and 235 μm in bottom layer. The result shows that solvent is essential to separate oil phase into molecular light and weight fractions during centrifugation. With solvent/oil ratio increases from 1:2, 1:1, 2:1 to 5:1, molecular weight in upper layer decreases from 1044, 1043, 1020 to 846 combined with that in bottom layer increases. A model was proposed to calculate the oil residue content in solid phases after sedimentation. The findings of this paper provide information for optimizing the oil recovery and clean treatment.

Gravitational stresses in long symmetric ridges and valleys in anisotropic rock

USGS Publications Warehouse

Pan, E.; Amadei, B.; Savage, W.Z.

1994-01-01

The effect of topography and rock mass anisotropy on gravitational stresses in long isolated symmetric ridges and valleys is modeled using an analytical method proposed earlier by the first two authors. The rock mass deforms under a condition of plane strain. A parametric study is presented on the effect of (1) topography, (2) orientation of anisotropy and (3) degree of anisotropy on the magnitude and distribution of gravitational stresses in transversely isotropic rock masses with planes of anisotropy striking parallel to the ridge or valley axis. It is found that compressive stresses develop near ridge crests and that tensile stresses develop in valley bottoms and valley walls. The magnitude of the gravitational stresses is of the order of the characteristics stress ??{variant}g??b?? where ??{variant} is the rock density, g is the gravitational acceleration and ??b?? is the height of the ridge or depth of the valley. ?? 1994.

A nonlinear steady model for moist hydrostatic mountain waves

NASA Technical Reports Server (NTRS)

Barcilon, A.; Fitzjarrald, D.

1985-01-01

The dynamics of hydrostatic gravity waves generated by the passage of a steady, stably stratified, moist flow over a two-dimensional topography is considered. Coriolis effects are neglected. The cloud region is determined by the dynamics, and within that region the Brunt-Vaisala frequency takes on a value smaller than the outside value. In both the dry and cloudy regions the Brunt-Vaisala frequency is constant with height. The moist layer is considered to be either next to the mountain or at midlevels and to be deep enough so that an entire cloud forms in that layer. The nonlinearity in the flow and lower boundary affects the dynamics of these waves and wave drag. The latter is found to depend upon: (1) the location of the moist layer with respect to the ground, (2) the amount of moisture, (3) the degree of nonlinearity and (4) the departure from symmetry in the bottom topography.

Structure of Subsurface Sediments in the Scan Basin (Scotia Sea)

NASA Astrophysics Data System (ADS)

Schreider, Al. A.; Schreider, A. A.; Sazhneva, A. E.; Galindo-Zaldivar, J.; Ruano, P.; Maldonado, A.; Martos-Martin, Y.; Lobo, F.

2018-01-01

The structure of sediments in the Scotia Sea is used as a basis for reconstructing the geological history of its bottom in the Late Quaternary. The Scan Basin is one of the main elements of the topography of the southern Scotia Sea. Its formation played a considerable role in the fragmentation of the continent, which included the Bruce and Discovery banks. The main parameters of the sediment layer in the Scan Basin have been reconstructed by the present time, but its top part has not been studied. In this work, we analyze the first data obtained on the R/V Gesperidas with the use of a TOPAS PS 18/40 high-resolution seismic profilograph in 2012. Three layers in the subsurface sediments on the bottom of the Scan Basin were specified for the first time. The mean periods of their deposition in the Late Quaternary were determined as 115000 years for the first, 76000 years for the second, and 59 000 years for the third layer from the surface of the bottom. The duration of the total accumulation period of the three layers is about 250000 years.

Exact Solutions for Wind-Driven Coastal Upwelling and Downwelling over Sloping Topography

NASA Astrophysics Data System (ADS)

Choboter, P.; Duke, D.; Horton, J.; Sinz, P.

2009-12-01

The dynamics of wind-driven coastal upwelling and downwelling are studied using a simplified dynamical model. Exact solutions are examined as a function of time and over a family of sloping topographies. Assumptions in the two-dimensional model include a frictionless ocean interior below the surface Ekman layer, and no alongshore dependence of the variables; however, dependence in the cross-shore and vertical directions is retained. Additionally, density and alongshore momentum are advected by the cross-shore velocity in order to maintain thermal wind. The time-dependent initial-value problem is solved with constant initial stratification and no initial alongshore flow. An alongshore pressure gradient is added to allow the cross-shore flow to be geostrophically balanced far from shore. Previously, this model has been used to study upwelling over flat-bottom and sloping topographies, but the novel feature in this work is the discovery of exact solutions for downwelling. These exact solutions are compared to numerical solutions from a primitive-equation ocean model, based on the Princeton Ocean Model, configured in a similar two-dimensional geometry. Many typical features of the evolution of density and velocity during downwelling are displayed by the analytical model.

Turbulence and dissipation in a computational model of Luzon Strait

NASA Astrophysics Data System (ADS)

Jalali, Masoud; Sarkar, Sutanu

2014-11-01

Generation sites for topographic internal gravity waves can also be sites of intense turbulence. Bottom-intensified flow at critical slopes leads to convective instability and turbulent overturns [Gayen & Sarkar (2011)]. A steep ridge with small excursion number, Ex , but large super criticality can lead to nonlinear features according to observations [Klymak et al. (2008)] and numerical simulations [Legg & Klymak (2008)]. The present work uses high resolution 3-D LES to simulate flow over a model with multiscale topography patterned after a cross-section of Luzon Strait, a double-ridge generation site which was the subject of the recent IWISE experiment. A 1:100 scaling of topography was employed and environmental parameters were chosen to match the slope criticality and Fr number in the field. Several turbulent zones were identified including breaking lee waves, critical slope boundary layer, downslope jets, internal wave beams, and vortical valley flows. The multiscale model topography has subridges where a local Ex may be defined. Wave breaking and turbulence at these subridges can be understood if the local value of Ex is employed when using the Ex -based regimes identified by Jalali et al. (2014) in their DNS of oscillating flow over a single triangular obstacle.

Transport of Antarctic Bottom Water through passages in the East Azores Ridge (37° N) in the East Atlantic

NASA Astrophysics Data System (ADS)

Tarakanov, R. Yu.; Morozov, E. G.; Gritsenko, A. M.; Demidova, T. A.; Makarenko, N. I.

2013-07-01

The structure of northerly overflow of Antarctic Bottom Water (AABW) through passages in the East Azores Ridge (37° N) in the East Atlantic from the Madeira Basin to the Iberian Basin is studied on the basis of hydrographic measurements carried out by the Institute of Oceanology, Russian Academy of Sciences (RAS) in October 2011, historical World Ocean Data Base 2009, and recent data on the bottom topography. The overflow of the coldest layers of this water occurs through two passages with close depths at 16° W (Discovery Gap) and at 19°30' W (nameless Western Gap). It is shown that it is likely that the role of the latter passage in water transport was underestimated in earlier publications because the water (2.01°C) found in the region north of the Western Gap was cooler than in the region north of the Discovery Gap (2.03°C). In 2011, we found a decrease of 0.01°C in the AABW temperature near the bottom compared to previous measurements in 1982 (from 2.011°C to 2.002°C). Analysis of the historical database shows that this decrease is most likely caused by the cooling trend in the abyssal waters in the East Atlantic basins.

Do it yourself remote sensing: Generating an inexpensive, high tech, real science lake mapping project for the classroom

NASA Technical Reports Server (NTRS)

Metzger, Stephen M.

1993-01-01

The utilization of modest equipment and software revealed bottom contours and water column conditions of a dynamic water body. Classroom discussions of field techniques and equipment capabilities followed by exercises with the data sets in cause-and-effect analysis all contributed to participatory education in the process of science. This project is presented as a case study of the value of engaging secondary and collegiate level students in planning, executing and appraising a real world investigation which they can directly relate to. A 1 km wide bay, experiencing marsh inflow, along an 8 km long lake situated 120 km north of Ottawa, Canada, on the glaciated Canadian Precambrian Shield was mapped in midsummer for submerged topography, bottom composition, temperature profile, turbudity, dissolved oxygen and biota distribution. Low level aerial photographs scanned into image processing software are permitting spatial classification of bottom variations in biology and geology. Instrumentation consisted of a portable sport fishing SONAR depth finder, an electronic lead line multiprobe with photocell, thermistor and dissolved oxygen sensors, a selective depth water sampler, portable pH meter, an underwater camera mounted on a home-made platform with a bottom-contact trigger and a disposable underwater camera for shallow survey work. Sampling transects were referenced using a Brunton hand transit triangulating several shore markers.

Characterization of a New Organosilicon Photoresist

NASA Astrophysics Data System (ADS)

Cunningham, Wells C.

1987-08-01

For a number of years, there has lo'ep. great interest in organometallic based photoresists for use as the top layer in multilevel resist schemes.-' In general, bilevel approaches to lithography are forced upon the industry as a means of planarizing topography for a subsequent patterning step. This pattern is initially defined by exposure and development of a thin top layer (0.3 to 0.5μm) over the thicker bottom layer (1.0 to 2.0μm). (See Figure 1). In a conventional bilevel approach, the chosen bottom layer is photoactive at a wavelength for which the top is relatively opaque. The top level acts as a portable conformable mask (PCM) for image transfer through the bottom layer after its exposure and wet development. By using a silicon containing photoresist on the top image transfer may be accomplished using an oxygen plasma instead of a second exposure and development. The PCM in this case acts as an etch mask by forming a silicon dioxide crust in the plasma which slows the etch rate of the top versus the bottom layer. A generic curve of etch rate of a photoresist versus percent silicon by weight is shown in Figure 2. The shape is similar over a wide range of organosilicon polymers.5,6

Persian Gulf Response to a Wintertime Shamal Wind Event

DTIC Science & Technology

2010-01-01

26 "’lÖF^B ^^H H7^V??I K ^rB^S IT .’, . 2 i. SST diff - ^ S ^^> • fl THC IP •« 30 28 26 24 22 20 18...during the August- September period (Thoppil and Hogan, submitted for publication). Because of the narrow, shallow and irregular nature of bathy...metry, these eddies remain stationary or trapped by the bottom topography until they dissipate locally. They have clear signatures in the surface

Three-channel false colour AFM images for improved interpretation of complex surfaces: a study of filamentous cyanobacteria.

PubMed

Kurk, Toby; Adams, David G; Connell, Simon D; Thomson, Neil H

2010-05-01

Imaging signals derived from the atomic force microscope (AFM) are typically presented as separate adjacent images with greyscale or pseudo-colour palettes. We propose that information-rich false-colour composites are a useful means of presenting three-channel AFM image data. This method can aid the interpretation of complex surfaces and facilitate the perception of information that is convoluted across data channels. We illustrate this approach with images of filamentous cyanobacteria imaged in air and under aqueous buffer, using both deflection-modulation (contact) mode and amplitude-modulation (tapping) mode. Topography-dependent contrast in the error and tertiary signals aids the interpretation of the topography signal by contributing additional data, resulting in a more detailed image, and by showing variations in the probe-surface interaction. Moreover, topography-independent contrast and topography-dependent contrast in the tertiary data image (phase or friction) can be distinguished more easily as a consequence of the three dimensional colour-space.

Sediment drifts and contourites on the continental margin off northwest Britain

NASA Astrophysics Data System (ADS)

Stoker, M. S.; Akhurst, M. C.; Howe, J. A.; Stow, D. A. V.

1998-01-01

Seismic reflection profiles and short cores from the continental margin off northwest Britain have revealed a variety of sediment-drift styles and contourite deposits preserved in the northeast Rockall Trough and Faeroe-Shetland Channel. The sediment drifts include: (1) distinctly mounded elongate drifts, both single- and multi-crested; (2) broad sheeted drift forms, varying from gently domed to flat-lying; and (3) isolated patch drifts, including moat-related drifts. Fields of sediment waves are locally developed in association with the elongate and gently domed, broad sheeted drifts. The contrasting styles of the sediment drifts most probably reflect the interaction between a variable bottom-current regime and the complex bathymetry of the continental margin. The bulk of the mounded/gently domed drifts occur in the northeast Rockall Trough, whereas the flat-lying, sheet-form deposits occur in the Faeroe-Shetland Channel, a much narrower basin which appears to have been an area more of sediment export than drift accumulation. Patch drifts are present in both basins. In the northeast Rockall Trough, the along-strike variation from single- to multi-crested elongate drifts may be a response to bottom-current changes influenced by developing drift topography. Muddy, silty muddy and sandy contourites have been recovered in sediment cores from the uppermost parts of the drift sequences. On the basis of their glaciomarine origin, these mid- to high-latitude contourites can be referred to, collectively, as glacigenic contourites. Both partial and complete contourite sequences are preserved; the former consist largely of sandy (mid-only) and top-only contourites. Sandy contourites, by their coarse-grained nature and their formation under strongest bottom-current flows, are the most likely to be preserved in the rock record. However, the very large scale of sediment drifts should be borne in mind with regard to the recognition of fossil contourites in ancient successions.

A simulation of the OMEGA/Mars Express observations: Analysis of the atmospheric contribution

NASA Astrophysics Data System (ADS)

Melchiorri, R.; Drossart, P.; Fouchet, T.; Bézard, B.; Forget, F.; Gendrin, A.; Bibring, J. P.; Manaud, N.; OMEGA Team; Berthé, M.; Bibring, J.-P.; Langevin, Y.; Forni, O.; Gendrin, A.; Gondet, B.; Manaud, N.; Poulet, F.; Poulleau, G.; Soufflot, A.; Mangold, N.; Bonello, G.; Forget, F.; Bezard, B.; Combes, M.; Drossart, P.; Encrenaz, T.; Fouchet, T.; Melchiorri, R.; Erard, S.; Bellucci, G.; Altieri, F.; Formisano, V.; Fonti, S.; Capaccioni, F.; Cerroni, P.; Coradini, A.; Kottsov, V.; Ignatiev, N.; Moroz, V.; Titov, D.; Zasova, L.; Pinet, P.; Schmitt, B.; Sotin, C.; Hauber, E.; Hoffmann, H.; Jaumann, R.; Keller, U.; Arvidson, R.; Mustard, J.; Duxbary, T.

2006-08-01

Spectral images of Mars obtained by the Mars Express/OMEGA experiment in the near infrared are the result of a complex combination of atmospheric, aerosol and ground features. Retrieving the atmospheric information from the data is important, not only to decorrelate mineralogical against atmospheric features, but also to retrieve the atmospheric variability. Once the illumination conditions have been taken into account, the main source of variation on the CO2 absorption is due to the altitude of the surface, which governs atmospheric pressure variation by more than an order of magnitude between the summit of Olympus Mons down to the bottom of Valles Marineris. In this article we present a simplified atmospheric spectral model without scattering, specially developed for the OMEGA observations, which is used to retrieve the local topography through the analysis of the 2.0μmCO2 band. OMEGA atmospheric observations increase the horizontal resolution compared to MOLA altimetry measurements, and therefore complement the mineralogical studies from the same instrument. Finally, residual variations of the pressure can be related to atmospheric structure variation.

Wind-driven currents in a shallow lake or sea

NASA Technical Reports Server (NTRS)

Goldstein, M. E.; Gedney, R. T.

1971-01-01

For shallow lakes and seas such as the great lakes (especially Lake Erie) where the depth is not much greater than the Ekman depth, the usual Ekman dynamics cannot be used to predict the wind driven currents. The necessary extension to include shallow bodies of water, given by Welander, leads to a partial differential equation for the surface displacement which in turn determines all other flow quantities. A technique for obtaining exact analytical solutions to Welander's equation for bodies of water with large class of bottom topographies which may or may not contain islands is given. It involves applying conformal mapping methods to an extension of Welander's equation into the complex plane. When the wind stress is constant (which is the usual assumption for lakes) the method leads to general solutions which hold for bodies of water of arbitrary shape (the shape appears in the solutions through a set of constants which are the coefficients in the Laurent expansion of a mapping of the particular lake geometry). The method is applied to an elliptically shaped lake and a circular lake containing an eccentrically located circular island.

Numerical modeling of hydrodynamics and sediment transport—an integrated approach

NASA Astrophysics Data System (ADS)

Gic-Grusza, Gabriela; Dudkowska, Aleksandra

2017-10-01

Point measurement-based estimation of bedload transport in the coastal zone is very difficult. The only way to assess the magnitude and direction of bedload transport in larger areas, particularly those characterized by complex bottom topography and hydrodynamics, is to use a holistic approach. This requires modeling of waves, currents, and the critical bed shear stress and bedload transport magnitude, with a due consideration to the realistic bathymetry and distribution of surface sediment types. Such a holistic approach is presented in this paper which describes modeling of bedload transport in the Gulf of Gdańsk. Extreme storm conditions defined based on 138-year NOAA data were assumed. The SWAN model (Booij et al. 1999) was used to define wind-wave fields, whereas wave-induced currents were calculated using the Kołodko and Gic-Grusza (2015) model, and the magnitude of bedload transport was estimated using the modified Meyer-Peter and Müller (1948) formula. The calculations were performed using a GIS model. The results obtained are innovative. The approach presented appears to be a valuable source of information on bedload transport in the coastal zone.

Correlation between three-dimentional surface topography and color stability of different nanofilled composites.

PubMed

Öztürk, Elif; Güder, Gizem

2015-01-01

The aim of this study was to evaluate the 3-dimensional (3D) surface topography and color stability of four different resin composites after immersion in different soft-beverages. One hundred sixty disk-shaped specimens (diameter: 10 mm, and thickness: 2 mm) were made from four different resin composites (i.e., Filtek Z550, Tetric N-Ceram, Clearfil Majesty Esthetic, and Cavex Quadrant Universal LC). Each specimen was cured under mylar strips for 20 sec for both top and bottom surfaces. All of the specimens were stored in distilled water for 24 h at 37°C. Surface measurements were carried out using a noncontact 3D-optical-profilometer in terms of surface topography (Ra values). Color measurements of each specimen were performed with Vita Easy Shade system. All the measurements were performed at baseline and after 30 days of immersion in the selected soft-beverages (Redbull, Coca-Cola and Dimes-Lemonade). Control groups were stored in distilled water during the study. Ra values and color changes (ΔE values) of the groups were recorded. The data were statistically analyzed using a one way ANOVA and Tukey's post-hoc tests (SPSS 18.0). The tested soft-beverages in the present study caused color changes at a 30-day evaluation period for the tested resin composites (p < 0.05). However, 3D surface topography of resin composites was not influenced by the tested soft-beverages (p > 0.05). There was no significant interaction between the composite and beverage type on the Ra values of the resin composites (p > 0.05). No correlation was found between color stability and 3D surface topography of the resin composites. Color stability of resin composites may be affected by soft beverages. © Wiley Periodicals, Inc.

SAR imaging and hydrodynamic analysis of ocean bottom topographic waves

NASA Astrophysics Data System (ADS)

Zheng, Quanan; Li, Li; Guo, Xiaogang; Ge, Yong; Zhu, Dayong; Li, Chunyan

2006-09-01

The satellite synthetic aperture radar (SAR) images display wave-like patterns of the ocean bottom topographic features at the south outlet of Taiwan Strait (TS). Field measurements indicate that the most TS water body is vertically stratified. However, SAR imaging models available were developed for homogeneous waters. Hence explaining SAR imaging mechanisms of bottom features in a stratified ocean is beyond the scope of those models. In order to explore these mechanisms and to determine the quantitative relations between the SAR imagery and the bottom features, a two-dimensional, three-layer ocean model with sinusoidal bottom topographic features is developed. Analytical solutions and inferences of the momentum equations of the ocean model lead to the following conditions. (1) In the lower layer, the topography-induced waves (topographic waves hereafter) exist in the form of stationary waves, which satisfy a lower boundary resonance condition σ = kC0, here σ is an angular frequency of the stationary waves, k is a wavenumber of bottom topographic corrugation, and C0 is a background current speed. (2) As internal waves, the topographic waves may propagate vertically to the upper layer with an unchanged wavenumber k, if a frequency relation N3 < σ < N2 is satisfied, here N2 and N3 are the Brunt-Wäisälä frequencies of middle layer and upper layer, respectively. (3) The topographic waves are extremely amplified if an upper layer resonance condition is satisfied. The SAR image of topographic waves is derived on the basis of current-modulated small wave spectra. The results indicate that the topographic waves on SAR images have the same wavelength of bottom topographic corrugation, and the imagery brightness peaks are either inphase or antiphase with respect to the topographic corrugation, depending on a sign of a coupling factor. These theoretical predictions are verified by field observations. The results of this study provide a physical basis for quantitative interpretation of SAR images of bottom topographic waves in the stratified ocean.

3D Imaging and Automated Ice Bottom Tracking of Canadian Arctic Archipelago Ice Sounding Data

NASA Astrophysics Data System (ADS)

Paden, J. D.; Xu, M.; Sprick, J.; Athinarapu, S.; Crandall, D.; Burgess, D. O.; Sharp, M. J.; Fox, G. C.; Leuschen, C.; Stumpf, T. M.

2016-12-01

The basal topography of the Canadian Arctic Archipelago ice caps is unknown for a number of the glaciers which drain the ice caps. The basal topography is needed for calculating present sea level contribution using the surface mass balance and discharge method and to understand future sea level contributions using ice flow model studies. During the NASA Operation IceBridge 2014 arctic campaign, the Multichannel Coherent Radar Depth Sounder (MCoRDS) used a three transmit beam setting (left beam, nadir beam, right beam) to illuminate a wide swath across the ice glacier in a single pass during three flights over the archipelago. In post processing we have used a combination of 3D imaging methods to produce images for each of the three beams which are then merged to produce a single digitally formed wide swath beam. Because of the high volume of data produced by 3D imaging, manual tracking of the ice bottom is impractical on a large scale. To solve this problem, we propose an automated technique for extracting ice bottom surfaces by viewing the task as an inference problem on a probabilistic graphical model. We first estimate layer boundaries to generate a seed surface, and then incorporate additional sources of evidence, such as ice masks, surface digital elevation models, and feedback from human users, to refine the surface in a discrete energy minimization formulation. We investigate the performance of the imaging and tracking algorithms using flight crossovers since crossing lines should produce consistent maps of the terrain beneath the ice surface and compare manually tracked "ground truth" to the automated tracking algorithms. We found the swath width at the nominal flight altitude of 1000 m to be approximately 3 km. Since many of the glaciers in the archipelago are narrower than this, the radar imaging, in these instances, was able to measure the full glacier cavity in a single pass.

A zonally averaged, three-basin ocean circulation model for climate studies

NASA Astrophysics Data System (ADS)

Hovine, S.; Fichefet, T.

1994-09-01

A two-dimensional, three-basin ocean model suitable for long-term climate studies is developed. The model is based on the zonally averaged form of the primitive equations written in spherical coordinates. The east-west density difference which arises upon averaging the momentum equations is taken to be proportional to the meridional density gradient. Lateral exchanges of heat and salt between the basins are explicitly resolved. Moreover, the model includes bottom topography and has representations of the Arctic Ocean and of the Weddell and Ross seas. Under realistic restoring boundary conditions, the model reproduces the global conveyor belt: deep water is formed in the Atlantic between 60 and 70°N at a rate of about 17 Sv (1 Sv=106 m3 s-1) and in the vicinity of the Antarctic continent, while the Indian and Pacific basins show broad upwelling. Superimposed on this thermohaline circulation are vigorous wind-driven cells in the upper thermocline. The simulated temperature and salinity fields and the computed meridional heat transport compare reasonably well with the observational estimates. When mixed boundary conditions (i.e., a restoring condition on sea-surface temperature and flux condition on sea-surface salinity) are applied, the model exhibits an irregular behavior before reaching a steady state characterized by self-sustained oscillations of 8.5-y period. The conveyor-belt circulation always results at this stage. A series of perturbation experiments illustrates the ability of the model to reproduce different steady-state circulations under mixed boundary conditions. Finally, the model sensitivity to various factors is examined. This sensitivity study reveals that the bottom topography and the presence of a submarine meridional ridge in the zone of the Drake Passage play a crucial role in determining the properties of the model bottom-water masses. The importance of the seasonality of the surface forcing is also stressed.

Topographic Enhancement of Vertical Mixing in the Southern Ocean

NASA Astrophysics Data System (ADS)

Mashayek, A.; Ferrari, R. M.; Merrifield, S.; St Laurent, L.

2016-02-01

Diapycnal turbulent mixing in the Southern Ocean is believed to play a role in setting the rate of the ocean Meridional Overturning Circulation (MOC), an important element of the global climate system. Whether this role is important, however, depends on the strength of this mixing, which remains poorly qualified on global scale. To address this question, a passive tracer was released upstream of the Drake Passage in 2009 as a part of the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES). The mixing was then inferred from the vertical/diapycnal spreading of the tracer. The mixing was also calculated from microstructure measurements of shear and stratification. The diapycnal turbulent mixing inferred from the tracer was found to be an order of magnitude larger than that estimated with the microstructure probes at various locations along the path of the tracer. While the values inferred from tracer imply a key role played by mixing in setting the MOC, those based on localized measurements suggest otherwise. In this work we use a high resolution numerical ocean model of the Drake Passage region sampled in the DIMES experiment to explain that the difference between the two estimates arise from the large values of mixing encountered by the tracer, when it flows close to the bottom topography. We conclude that the large mixing close to the ocean bottom topography is sufficiently strong to play an important role in setting the Southern Ocean branch of the MOC below 2 km.

The role of Internal Solitary Waves on deep-water sedimentary processes: the case of up-slope migrating sediment waves off the Messina Strait

PubMed Central

Droghei, R.; Falcini, F.; Casalbore, D.; Martorelli, E.; Mosetti, R.; Sannino, G.; Santoleri, R.; Chiocci, F. L.

2016-01-01

Subaqueous, asymmetric sand waves are typically observed in marine channel/canyon systems, tidal environments, and continental slopes exposed to strong currents, where they are formed by current shear resulting from a dominant unidirectional flow. However, sand-wave fields may be readily observed in marine environments where no such current exists; the physical processes driving their formation are enigmatic or not well understood. We propose that internal solitary waves (ISWs) induced by tides can produce an effective, unidirectional boundary “current” that forms asymmetric sand waves. We test this idea by examining a sand-wave field off the Messina Strait, where we hypothesize that ISWs formed at the interface between intermediate and surface waters are refracted by topography. Hence, we argue that the deflected pattern (i.e., the depth-dependent orientation) of the sand-wave field is due to refraction of such ISWs. Combining field observations and numerical modelling, we show that ISWs can account for three key features: ISWs produce fluid velocities capable of mobilizing bottom sediments; the predicted refraction pattern resulting from the interaction of ISWs with bottom topography matches the observed deflection of the sand waves; and predicted migration rates of sand waves match empirical estimates. This work shows how ISWs may contribute to sculpting the structure of continental margins and it represents a promising link between the geological and oceanographic communities. PMID:27808239

Spatial and Temporal Trends in the Density Stratification of Long Island Sound

NASA Astrophysics Data System (ADS)

Marchese, P.

2017-12-01

The density structure of Long Island Sound (LIS) was studied using historical hydrographic data. Like many estuaries, LIS suffers from hypoxia during the summer months; a result of the density stratification caused by surface warming and weak wind conditions. In summer, the water column is stratified at both ends (east and west) with a vertically well mixed region near the middle. During these months, the western side of LIS experiences low bottom dissolved from the higher nutrient influx and the resulting oxygen demand. Eastern LIS does not experience hypoxia despite sometimes being more highly stratified than the west because these bottom water are regularly ventilated by incoming higher DO water from outside. Topography and density gradients prevent the low DO water from encroaching to the eastern basin. In the fall, changing atmospheric conditions weakens the density stratification throughout LIS, although in some regions the vertical gradient will persist, sometimes until January.

Human Decision Making Based on Variations in Internal Noise: An EEG Study

PubMed Central

Amitay, Sygal; Guiraud, Jeanne; Sohoglu, Ediz; Zobay, Oliver; Edmonds, Barrie A.; Zhang, Yu-Xuan; Moore, David R.

2013-01-01

Perceptual decision making is prone to errors, especially near threshold. Physiological, behavioural and modeling studies suggest this is due to the intrinsic or ‘internal’ noise in neural systems, which derives from a mixture of bottom-up and top-down sources. We show here that internal noise can form the basis of perceptual decision making when the external signal lacks the required information for the decision. We recorded electroencephalographic (EEG) activity in listeners attempting to discriminate between identical tones. Since the acoustic signal was constant, bottom-up and top-down influences were under experimental control. We found that early cortical responses to the identical stimuli varied in global field power and topography according to the perceptual decision made, and activity preceding stimulus presentation could predict both later activity and behavioural decision. Our results suggest that activity variations induced by internal noise of both sensory and cognitive origin are sufficient to drive discrimination judgments. PMID:23840904

Numerical modeling and analysis of the effect of Greek complex topography on tornado genesis

NASA Astrophysics Data System (ADS)

Matsangouras, I. T.; Pytharoulis, I.; Nastos, P. T.

2014-02-01

Tornadoes have been reported in Greece over the last decades in specific sub-geographical areas and have been associated with strong synoptic forcing. It is well known that meteorological conditions over Greece are affected at various scales by the significant variability of topography, the Ionian Sea at the west and the Aegean Sea at the east. However, there is still uncertainty regarding topography's importance on tornadic generation and development. The aim of this study is to investigate the role of topography in significant tornado genesis events that were triggered under strong synoptic scale forcing over Greece. Three tornado events that occurred over the last years in Thiva (Boeotia, 17 November 2007), Vrastema (Chalkidiki, 12 February 2010) and Vlychos (Lefkada, 20 September 2011) have been selected for numerical experiments. These events were associated with synoptic scale forcing, while their intensity was T4-T5 (Torro scale) and caused significant damage. The simulations were performed using the non-hydrostatic Weather Research and Forecasting model (WRF), initialized with ECMWF gridded analyses, with telescoping nested grids that allow the representation of atmospheric circulations ranging from the synoptic scale down to the meso scale. In the experiments the topography of the inner grid was modified by: (a) 0% (actual topography) and (b) -100% (without topography). The aim was to determine whether the occurrence of tornadoes - mainly identified by various severe weather instability indices - could be indicated by modifying topography. The main utilized instability variables concerned the Bulk Richardson number shear (BRN), the energy helicity index (EHI), the storm-relative environmental helicity (SRH) and the maximum convective available potential energy (MCAPE, for parcel with maximum theta-e). Additional a verification of model was conducted for every sensitivity experiment accompanied with analysis absolute vorticity budget. Numerical simulations revealed that the complex topography was denoted as an important factor during 17 November 2007 and 12 February 2010 events, based on EHI and BRN analyses. Topography around 20 September 2011 event was characterized as the least factor based on EHI, SRH, BRN analyses.

Numerical modeling and analysis of the effect of complex Greek topography on tornadogenesis

NASA Astrophysics Data System (ADS)

Matsangouras, I. T.; Pytharoulis, I.; Nastos, P. T.

2014-07-01

Tornadoes have been reported in Greece over recent decades in specific sub-geographical areas and have been associated with strong synoptic forcing. While it has been established that meteorological conditions over Greece are affected at various scales by the significant variability of topography, the Ionian Sea to the west and the Aegean Sea to the east, there is still uncertainty regarding topography's importance on tornadic generation and development. The aim of this study is to investigate the role of topography in significant tornadogenesis events that were triggered under strong synoptic scale forcing over Greece. Three tornado events that occurred over the last years in Thebes (Boeotia, 17 November 2007), Vrastema (Chalkidiki, 12 February 2010) and Vlychos (Lefkada, 20 September 2011) were selected for numerical experiments. These events were associated with synoptic scale forcing, while their intensities were T4-T5 (on the TORRO scale), causing significant damage. The simulations were performed using the non-hydrostatic weather research and forecasting model (WRF), initialized by European Centre for Medium-Range Weather Forecasts (ECMWF) gridded analyses, with telescoping nested grids that allow for the representation of atmospheric circulations ranging from the synoptic scale down to the mesoscale. In the experiments, the topography of the inner grid was modified by: (a) 0% (actual topography) and (b) -100% (without topography), making an effort to determine whether the occurrence of tornadoes - mainly identified by various severe weather instability indices - could be indicated by modifying topography. The principal instability variables employed consisted of the bulk Richardson number (BRN) shear, the energy helicity index (EHI), the storm-relative environmental helicity (SRH), and the maximum convective available potential energy (MCAPE, for parcels with maximum θe). Additionally, a model verification was conducted for every sensitivity experiment accompanied by analysis of the absolute vorticity budget. Numerical simulations revealed that the complex topography constituted an important factor during the 17 November 2007 and 12 February 2010 events, based on EHI, SRH, BRN, and MCAPE analyses. Conversely, topography around the 20 September 2011 event was characterized as the least significant factor based on EHI, SRH, BRN, and MCAPE analyses.

Channel-Like Bottom Features and High Bottom Melt Rates of Petermann Gletscher's Floating Tongue in Northwestern Greenland

NASA Astrophysics Data System (ADS)

Steffen, K.; Huff, R. D.; Cullen, N.; Rignot, E.; Stewart, C.; Jenkins, A.

2003-12-01

Petermann Gletscher is the largest and most influential outlet glacier in central northern Greenland. Located at 81 N, 60 W, it drains an area of 71,580 km2, with a discharge of 12 cubic km of ice per year into the Arctic Ocean. We finished a second field season in spring 2003 collecting in situ data on local climate, ice velocity, strain rates, ice thickness profiles and bottom melt rates of the floating ice tongue. Last years findings have been confirmed that large channels of several hundred meters in depth at the underside of the floating ice tongue are running roughly parallel to the flow direction. We mapped these channels using ground penetrating radar at 25 MHz frequency and multi-phase radar in profiling mode over half of the glacier's width. In addition, NASA airborne laser altimeter data was collected along and cross-glacier for accurate assessment of surface topography. We will present a 3-D model of the floating ice tongue and provide hypothesis of the origin and mechanism that caused these large ice channels at the bottom of the floating ice tongue. Multi-phase radar point measurements revealed interesting results of bottom melt rates, which exceed all previous estimates. It is worth mentioned that the largest bottom melt rates were not found at the grounding line, which is common on ice shelves in the Antarctica. In addition, GPS tidal motion has been measured over one lunar cycle at the flex zone and on the free floating ice tongue and the result will be compared to historic measurements made at the beginning of last century. The surface climate has been recorded by two automatic weather stations over a 12 month period, and the local climate of this remote region will be presented.

Controlled surface topography regulates collective 3D migration by epithelial-mesenchymal composite embryonic tissues.

PubMed

Song, Jiho; Shawky, Joseph H; Kim, YongTae; Hazar, Melis; LeDuc, Philip R; Sitti, Metin; Davidson, Lance A

2015-07-01

Cells in tissues encounter a range of physical cues as they migrate. Probing single cell and collective migratory responses to physically defined three-dimensional (3D) microenvironments and the factors that modulate those responses are critical to understanding how tissue migration is regulated during development, regeneration, and cancer. One key physical factor that regulates cell migration is topography. Most studies on surface topography and cell mechanics have been carried out with single migratory cells, yet little is known about the spreading and motility response of 3D complex multi-cellular tissues to topographical cues. Here, we examine the response to complex topographical cues of microsurgically isolated tissue explants composed of epithelial and mesenchymal cell layers from naturally 3D organized embryos of the aquatic frog Xenopus laevis. We control topography using fabricated micropost arrays (MPAs) and investigate the collective 3D migration of these multi-cellular systems in these MPAs. We find that the topography regulates both collective and individual cell migration and that dense MPAs reduce but do not eliminate tissue spreading. By modulating cell size through the cell cycle inhibitor Mitomycin C or the spacing of the MPAs we uncover how 3D topographical cues disrupt collective cell migration. We find surface topography can direct both single cell motility and tissue spreading, altering tissue-scale processes that enable efficient conversion of single cell motility into collective movement. Copyright © 2015 Elsevier Ltd. All rights reserved.

An immersed boundary method for direct and large eddy simulation of stratified flows in complex geometry

NASA Astrophysics Data System (ADS)

Rapaka, Narsimha R.; Sarkar, Sutanu

2016-10-01

A sharp-interface Immersed Boundary Method (IBM) is developed to simulate density-stratified turbulent flows in complex geometry using a Cartesian grid. The basic numerical scheme corresponds to a central second-order finite difference method, third-order Runge-Kutta integration in time for the advective terms and an alternating direction implicit (ADI) scheme for the viscous and diffusive terms. The solver developed here allows for both direct numerical simulation (DNS) and large eddy simulation (LES) approaches. Methods to enhance the mass conservation and numerical stability of the solver to simulate high Reynolds number flows are discussed. Convergence with second-order accuracy is demonstrated in flow past a cylinder. The solver is validated against past laboratory and numerical results in flow past a sphere, and in channel flow with and without stratification. Since topographically generated internal waves are believed to result in a substantial fraction of turbulent mixing in the ocean, we are motivated to examine oscillating tidal flow over a triangular obstacle to assess the ability of this computational model to represent nonlinear internal waves and turbulence. Results in laboratory-scale (order of few meters) simulations show that the wave energy flux, mean flow properties and turbulent kinetic energy agree well with our previous results obtained using a body-fitted grid (BFG). The deviation of IBM results from BFG results is found to increase with increasing nonlinearity in the wave field that is associated with either increasing steepness of the topography relative to the internal wave propagation angle or with the amplitude of the oscillatory forcing. LES is performed on a large scale ridge, of the order of few kilometers in length, that has the same geometrical shape and same non-dimensional values for the governing flow and environmental parameters as the laboratory-scale topography, but significantly larger Reynolds number. A non-linear drag law is utilized in the large-scale application to parameterize turbulent losses due to bottom friction at high Reynolds number. The large scale problem exhibits qualitatively similar behavior to the laboratory scale problem with some differences: slightly larger intensification of the boundary flow and somewhat higher non-dimensional values for the energy fluxed away by the internal wave field. The phasing of wave breaking and turbulence exhibits little difference between small-scale and large-scale obstacles as long as the important non-dimensional parameters are kept the same. We conclude that IBM is a viable approach to the simulation of internal waves and turbulence in high Reynolds number stratified flows over topography.

Infrared monitoring of hydrothermal echanges occurring in a fracture

NASA Astrophysics Data System (ADS)

Neuville, Amélie; Flekkøy, Eirik; Galland, Olivier; Gundersen, Olav; Jørgen Måløy, Knut

2014-05-01

We aim to characterize the heat exchange that occurs when water flows through a fracture at a different temperature from that of the surrounding rock. This happens during many man-made or natural processes. For instance, injection of water in the context of geothermal power plants or sudden mechanical movements (e.g. rockfalls, landslides, earthquakes) that transport water. It is presently challenging to estimate the heat transfer and temperature inside a fractured medium where water is flowing, despite various numerical models which have been proposed [Neuville et al, 2010, 2013; Kolditz et Clauser, 1998; Heuer, 1991]. The difficulties arise from the complexity of the fracture network, the fracture topography, as well as complex hydraulic flow (e.g. recirculation) and heat exchanges. As a consequence, various hypotheses were made in the models. More experimental data are required in order to calibrate these models, validate or refute the hypotheses. Our work aims to provide temperature data at the fracture scale, in an experiment where the pressure gradient an fracture topography are controlled, with slow hydraulic flow. This required to develop a setup from scratch. An infrared camera and thermistors are used to monitor the temperature in space and time. Water is injected through a partly natural rough fracture with impermeable walls. The bottom part of the fracture is a larvikite stone with a rough surface (presumably this surface was obtained from mode I fracturing), and the top part is a layer which is transparent in the infrared range. As a consequence the infrared camera is expected to measure the temperature at the interface between this transparent layer and the water. The topography of the surface of the rock was reconstituted using a photogrammetry software [MicMac, IGN], and compared to measurements made with a mechanical profiler. Using this geometry we carefully localize the temperature observations (infrared camera and thermistors) and correlate the temperature variations with the topography. Preliminary comparisons with simulations from a coupled lattice Boltzmann method that solves both the complete Navier-Stokes and advection-diffusion equations in three-dimensions are also presented. N. Heuer, T. Küpper and D. Windelberg, Mathematical model of a Hot Dry Rock system, Geophys. J. Int. 105, 659-664 (1991). O. Kolditz and C. Clauser, Numerical simulation of flow and heat transefer in fractured cristalline rocks: application to the hot dry rock site in Rosemanowes (U.K.), Geothermics, 27, 1, p 1-23, (1998). MicMac, IGN: sofware developed by the French Institut Géographique National (IGN) A. Neuville, R. Toussaint, and J. Schmittbuhl, Hydro-thermal flows in a self-affine rough fracture, Phys. Rev. E, 82, 036,317, (2010). A. Neuville, E.G. Flekkøy, R. Toussaint, Influence of asperities on fluid and thermal flow in a fracture: a coupled Lattice Boltzmann study. Journal of Geophysical Research, 118, 7, 3394-3407, (2013).

Seafloor environments in the Long Island Sound estuarine system

USGS Publications Warehouse

Knebel, H.J.; Signell, R.P.; Rendigs, R. R.; Poppe, L.J.; List, J.H.

1999-01-01

Four categories of modern seafloor sedimentary environments have been identified and mapped across the large, glaciated, topographically complex Long Island Sound estuary by means of an extensive regional set of sidescan sonographs, bottom samples, and video-camera observations and supplemental marine-geologic and modeled physical-oceanographic data. (1) Environments of erosion or nondeposition contain sediments which range from boulder fields to gravelly coarse-to-medium sands and appear on the sonographs either as patterns with isolated reflections (caused by outcrops of glacial drift and bedrock) or as patterns of strong backscatter (caused by coarse lag deposits). Areas of erosion or nondeposition were found across the rugged seafloor at the eastern entrance of the Sound and atop bathymetric highs and within constricted depressions in other parts of the basin. (2) Environments of bedload transport contain mostly coarse-to-fine sand with only small amounts of mud and are depicted by sonograph patterns of sand ribbons and sand waves. Areas of bedload transport were found primarily in the eastern Sound where bottom currents have sculptured the surface of a Holocene marine delta and are moving these sediments toward the WSW into the estuary. (3) Environments of sediment sorting and reworking comprise variable amounts of fine sand and mud and are characterized either by patterns of moderate backscatter or by patterns with patches of moderate-to-weak backscatter that reflect a combination of erosion and deposition. Areas of sediment sorting and reworking were found around the periphery of the zone of bedload transport in the eastern Sound and along the southern nearshore margin. They also are located atop low knolls, on the flanks of shoal complexes, and within segments of the axial depression in the western Sound. (4) Environments of deposition are blanketed by muds and muddy fine sands that produce patterns of uniformly weak backscatter. Depositional areas occupy broad areas of the basin floor in the western part of the Sound. The regional distribution of seafloor environments reflects fundamental differences in marine-geologic conditions between the eastern and western parts of the Sound. In the funnel-shaped eastern part, a gradient of strong tidal currents coupled with the net nontidal (estuarine) bottom drift produce a westward progression of environments ranging from erosion or nondeposition at the narrow entrance to the Sound, through an extensive area of bedload transport, to a peripheral zone of sediment sorting. In the generally broader western part of the Sound, a weak tidal-current regime combined with the production of particle aggregates by biologic or chemical processes, cause large areas of deposition that are locally interrupted by a patchy distribution of various other environments where the bottom currents are enhanced by and interact with the seafloor topography.

White Light Used to Enable Enhanced Surface Topography, Geometry, and Wear Characterization of Oil-Free Bearings

NASA Technical Reports Server (NTRS)

Lucero, John M.

2003-01-01

A new optically based measuring capability that characterizes surface topography, geometry, and wear has been employed by NASA Glenn Research Center s Tribology and Surface Science Branch. To characterize complex parts in more detail, we are using a three-dimensional, surface structure analyzer-the NewView5000 manufactured by Zygo Corporation (Middlefield, CT). This system provides graphical images and high-resolution numerical analyses to accurately characterize surfaces. Because of the inherent complexity of the various analyzed assemblies, the machine has been pushed to its limits. For example, special hardware fixtures and measuring techniques were developed to characterize Oil- Free thrust bearings specifically. We performed a more detailed wear analysis using scanning white light interferometry to image and measure the bearing structure and topography, enabling a further understanding of bearing failure causes.

Aeolian sand transport over complex intertidal bar-trough beach topography

NASA Astrophysics Data System (ADS)

Anthony, Edward J.; Ruz, Marie-Hélène; Vanhée, Stéphane

2009-04-01

Aeolian sand transport on macrotidal beaches with complex intertidal bar-trough topography (ridge-and-runnel beaches) was assessed from experiments in northern France that involved measurements of wind speed, saltation, surface moisture contents, and rates of sand trapping across surveyed portions of the upper beach profile. Beaches exhibiting intertidal bars and troughs are much more complex, topographically, than simple reflective or dissipative beaches. Furthermore, the intertidal bar-trough morphology commonly exhibits strong cross-shore variations in the moisture contents of the beach surface and in patterns of bedform development. The results of four 30-minute experiments, conducted along topographically surveyed portions of the upper beach-dune toe profile, show that troughs act as extremely efficient sand interceptors, because of their permanently saturated state, which also inhibits sand mobilisation. Troughs, thus, limit or segment the dry fetch during conditions of intermittent saltation. Flow lines, inferred from the wind profiles, suggest that complex interactions at the boundary layer are generated by the bar-trough topography. Troughs systematically appear to be characterised by air expansion, while bar faces generate ramp wind acceleration for onshore winds, and sometimes immediate downwind deceleration for offshore winds. These effects may also contribute to cross-shore variations in the rates of sand trapping. Finally, a simple conceptual model of effective fetch development, integrating the effects of the spring-neap tidal range and of gross bar-trough morphological variability over time, is proposed for bar-trough beaches. The model highlights the key theme of fetch segmentation induced by cross-shore differentiation in the moisture contents of the beach surface hinged on the complex topography of multiple bars and troughs.

3D reconstruction of the final PHILAE landing site: Abydos

NASA Astrophysics Data System (ADS)

Capanna, Claire; Jorda, Laurent; Lamy, Philippe; Gesquière, Gilles; Delmas, Cédric; Durand, Joëlle; Gaudon, Philippe; Jurado, Eric

2015-11-01

The Abydos region is the region of the final landing site of the PHILAE lander. The landing site has been potentially identified on images of this region acquired by the OSIRIS imaging system aboard the orbiter before (Oct 22, 2014) and after (Dec 6-13, 2014) the landing of PHILAE (Lamy et al., in prep.). Assuming that this identification is correct, we reconstructed the topography of Abydos in 3D using a method called ``multiresolution photoclinometry by deformation'' (MPCD, Capanna et al., The Visual Computer, 29(6-8): 825-835, 2013). The method works in two steps: (a) a DTM of this region is extracted from the global MPCD shape model, (b) the resulting triangular mesh is progressively deformed at increasing spatial resolution in order to match a set of 14 images of Abydos at pixel resolutions between 1 and 8 m. The method used to perform the image matching is the L-BFGS-b non-linear optimization (Morales et al., ACM Trans. Math. Softw., 38(1): 1-4, 2011).In spite of the very unfavourable illumination conditions, we achieve a vertical accuracy of about 3 m, while the horizontal sampling is 0.5 m. The accuracy is limited by high incidence angles on the images (about 60 deg on average) combined with a complex topography including numerous cliffs and a few overhangs. We also check the compatibility of the local DTM with the images obtained by the CIVA-P instrument aboard PHILAE. If the Lamy et al. identification is correct, our DTM shows that PHILAE landed in a cavity at the bottom of a small cliff of 8 m height.

A photofunctional bottom-up bis(dipyrrinato)zinc(II) complex nanosheet

PubMed Central

Sakamoto, Ryota; Hoshiko, Ken; Liu, Qian; Yagi, Toshiki; Nagayama, Tatsuhiro; Kusaka, Shinpei; Tsuchiya, Mizuho; Kitagawa, Yasutaka; Wong, Wai-Yeung; Nishihara, Hiroshi

2015-01-01

Two-dimensional polymeric nanosheets have recently gained much attention, particularly top-down nanosheets such as graphene and metal chalcogenides originating from bulk-layered mother materials. Although molecule-based bottom-up nanosheets manufactured directly from molecular components can exhibit greater structural diversity than top-down nanosheets, the bottom-up nanosheets reported thus far lack useful functionalities. Here we show the design and synthesis of a bottom-up nanosheet featuring a photoactive bis(dipyrrinato)zinc(II) complex motif. A liquid/liquid interfacial synthesis between a three-way dipyrrin ligand and zinc(II) ions results in a multi-layer nanosheet, whereas an air/liquid interfacial reaction produces a single-layer or few-layer nanosheet with domain sizes of >10 μm on one side. The bis(dipyrrinato)zinc(II) metal complex nanosheet is easy to deposit on various substrates using the Langmuir–Schäfer process. The nanosheet deposited on a transparent SnO2 electrode functions as a photoanode in a photoelectric conversion system, and is thus the first photofunctional bottom-up nanosheet. PMID:25831973

Deep water characteristics and circulation in the South China Sea

NASA Astrophysics Data System (ADS)

Wang, Aimei; Du, Yan; Peng, Shiqiu; Liu, Kexiu; Huang, Rui Xin

2018-04-01

This study investigates the deep circulation in the South China Sea (SCS) using oceanographic observations combined with results from a bottom layer reduced gravity model. The SCS water, 2000 m below the surface, is quite different from that in the adjacent Pacific Ocean, and it is characterized by its low dissolved oxygen (DO), high temperature and low salinity. The horizontal distribution of deep water properties indicates a basin-scale cyclonic circulation driven by the Luzon overflow. The results of the bottom layer reduced gravity model are consistent with the existence of the cyclonic circulation in the deep SCS. The circulation is stronger at the northern/western boundary. After overflowing the sill of the Luzon Strait, the deep water moves broadly southwestward, constrained by the 3500 m isobath. The broadening of the southward flow is induced by the downwelling velocity in the interior of the deep basin. The main deep circulation bifurcates into two branches after the Zhongsha Islands. The southward branch continues flowing along the 3500 m isobath, and the eastward branch forms the sub-basin scale cyclonic circulation around the seamounts in the central deep SCS. The returning flow along the east boundary is fairly weak. The numerical experiments of the bottom layer reduced gravity model reveal the important roles of topography, bottom friction, and the upwelling/downwelling pattern in controlling the spatial structure, particularly the strong, deep western boundary current.

Minimal-resource computer program for automatic generation of ocean wave ray or crest diagrams in shoaling waters

NASA Technical Reports Server (NTRS)

Poole, L. R.; Lecroy, S. R.; Morris, W. D.

1977-01-01

A computer program for studying linear ocean wave refraction is described. The program features random-access modular bathymetry data storage. Three bottom topography approximation techniques are available in the program which provide varying degrees of bathymetry data smoothing. Refraction diagrams are generated automatically and can be displayed graphically in three forms: Ray patterns with specified uniform deepwater ray density, ray patterns with controlled nearshore ray density, or crest patterns constructed by using a cubic polynomial to approximate crest segments between adjacent rays.

Upstream-advancing waves generated by three-dimensional moving disturbances

NASA Astrophysics Data System (ADS)

Lee, Seung-Joon; Grimshaw, Roger H. J.

1990-02-01

The wave field resulting from a surface pressure or a bottom topography in a horizontally unbounded domain is studied. Upstream-advancing waves successively generated by various forcing disturbances moving with near-resonant speeds are found by numerically solving a forced Kadomtsev-Petviashvili (fKP) equation, which shows in its simplest form the interplay of a basic linear wave operator, longitudinal and transverse dispersion, nonlinearity, and forcing. Curved solitary waves are found as a slowly varying similarity solution of the Kadomtsev-Petviashvili (KP) equation, and are favorably compared with the upstream-advancing waves numerically obtained.

A Well-Balanced Central-Upwind Scheme for the 2D Shallow Water Equations on Triangular Meshes

NASA Technical Reports Server (NTRS)

Bryson, Steve; Levy, Doron

2004-01-01

We are interested in approximating solutions of the two-dimensional shallow water equations with a bottom topography on triangular meshes. We show that there is a certain flexibility in choosing the numerical fluxes in the design of semi-discrete Godunov-type central schemes. We take advantage of this fact to generate a new second-order, central-upwind method for the two-dimensional shallow water equations that is well-balanced. We demonstrate the accuracy of our method as well as its balance properties in a variety of examples.

Observations and Numerical Modeling of Eddy Generation in the Mediterranean Undercurrent

NASA Astrophysics Data System (ADS)

Serra, N.; Ambar, I.; Kaese, R.

2001-12-01

In the frame of the European Union MAST III project CANIGO (Canary Islands Gibraltar Azores Observations), RAFOS floats were deployed in the Mediterranean undercurrent off south Portugal during the period from September 1997 to September 1998. An analysis of this Lagrangian approach complemented with results obtained with XBT probes and current meter data from the same project shows some of the major aspects of the flow associated with the undercurrent as well as the eddy activity related with it. Floats that stayed in the undercurrent featured a downstream deceleration and a steering by bottom topography. Three meddy formations at Cape St. Vincent could be isolated from the float data as well as the generation of dipolar structures in the Portimao Canyon, a feature not previously directly observed. The dynamical coupling of meddies and cyclones was observed for a considerable period of time. High-resolution modeling of the Mediterranean Outflow using a sigma-coordinate primitive equations ocean model (SCRUM) incorporating realistic topography and stratification reveals the adjustment of the salty plume while descending along the continental slope of the Gulf of Cadiz channeled by the topography. The model reproduces the generation of eddies in the two observed sites (cape and canyon) and the splitting of the outflow water into well-defined cores.

Identifying the Threshold of Dominant Controls on Fire Spread in a Boreal Forest Landscape of Northeast China

PubMed Central

Liu, Zhihua; Yang, Jian; He, Hong S.

2013-01-01

The relative importance of fuel, topography, and weather on fire spread varies at different spatial scales, but how the relative importance of these controls respond to changing spatial scales is poorly understood. We designed a “moving window” resampling technique that allowed us to quantify the relative importance of controls on fire spread at continuous spatial scales using boosted regression trees methods. This quantification allowed us to identify the threshold value for fire size at which the dominant control switches from fuel at small sizes to weather at large sizes. Topography had a fluctuating effect on fire spread across the spatial scales, explaining 20–30% of relative importance. With increasing fire size, the dominant control switched from bottom-up controls (fuel and topography) to top-down controls (weather). Our analysis suggested that there is a threshold for fire size, above which fires are driven primarily by weather and more likely lead to larger fire size. We suggest that this threshold, which may be ecosystem-specific, can be identified using our “moving window” resampling technique. Although the threshold derived from this analytical method may rely heavily on the sampling technique, our study introduced an easily implemented approach to identify scale thresholds in wildfire regimes. PMID:23383247

Turning Ocean Mixing Upside Down

NASA Astrophysics Data System (ADS)

Ferrari, Raffaele; Mashayek, Ali; Campin, Jean-Michael; McDougall, Trevor; Nikurashin, Maxim

2015-11-01

It is generally understood that small-scale mixing, such as is caused by breaking internal waves, drives upwelling of the densest ocean waters that sink to the ocean bottom at high latitudes. However the observational evidence that small-scale mixing is more vigorous close to the ocean bottom than above implies that small-scale mixing converts light waters into denser ones, thus driving a net sinking of abyssal water. It is shown that abyssal waters return to the surface along weakly stratified boundary layers, where the small-scale mixing of density decays to zero. The net ocean meridional overturning circulation is thus the small residual of a large sinking of waters, driven by small-scale mixing in the stratified interior, and an equally large upwelling, driven by the reduced small-scale mixing along the ocean boundaries. Thus whether abyssal waters upwell or sink in the net cannot be inferred simply from the vertical profile of mixing intensity, but depends also on the ocean hypsometry, i.e. the shape of the bottom topography. The implications of this result for our understanding of the abyssal ocean circulation will be presented with a combination of numerical models and observations.

Seafloor environments within the Boston Harbor- Massachusetts Bay sedimentary system: A regional synthesis

USGS Publications Warehouse

Knebel, H.J.; Circe, R.C.

1995-01-01

Modern seafloor sedimentary environments within the glaciated, topographically complex Boston Harbor and Massachusetts Bay area have been interpreted and mapped from an extensive collection of sidescan sonar records and supplemental marine geologic data. Three categories of environments are present that reflect the dominant long-term processes of erosion or nondeposition, deposition, and sediment reworking. (1) Environments of erosion or nondeposition comprise exposures of bedrock, glacial drift, coarse lag deposits, and possibly coastal plain rocks that contain sediments (where present) ranging from boulder fields to gravelly sands and occur in areas of relatively strong currents. (2) Environments of deposition contain fine-grained sediments ranging from muddy sands to muds that have accumulated in areas of predominantly weak bottom currents. (3) Environments of sediment reworking contain patches with textures ranging from sandy gravels to muds that have been produced by a combination of erosion and deposition in areas with variable bottom currents. The distribution of sedimentary environments across the Boston Harbor-Massachusetts Bay area is extremely patchy. Locally, this patchiness is due either to modifications of bottom-current strength (caused by the irregular topography and differences in water depth) or to small-scale changes in the supply of fine-grained sediments. Regional patchiness, however, reflects differences in geologic and oceanographic conditions among the estuarine, inner shelf, and basinal parts of the sedimentary system. The estuarine part of the system (Boston Harbor) is a depositional trap for fine-grained sediments because it is protected from large waves, has generally weak and variable tidal currents, and receives a large supply of fine grained detritus from natural and anthropogenic sources. The inner shelf, on the other hand, is largely an area of erosion or nondeposition due to sediment removal and redistribution during past sea-level changes, to sediment resuspension and winnowing by modern waves and currents, and to an inadequate supply of fine-grained sediments. The basinal part of the system (Stellwagen Basin) is mainly a tranquil depositional environment in which fine-grained sediments from several potential sources settle through the water column and accumulate under weak bottom currents. This study indicates areas within the Boston Harbor-Massachusetts Bay sedimentary system where fine-grained sediments and associated contaminants are likely to be either moved or deposited. It also provides a guide to the locations and variability of benthic habitats.

Coarse sediment transport dynamics at three spatial scales of bedrock channel bed complexity

NASA Astrophysics Data System (ADS)

Goode, J. R.; Wohl, E.

2007-12-01

Rivers incised into bedrock in fold-dominated terrain display a complex bed topography that strongly interacts with local hydraulics to produce spatial differences in bed sediment flux. We used painted tracer clasts to investigate how this complex bed topography influences coarse sediment transport at three spatial scales (reach, cross- section and grain). The study was conducted along the Ocoee River gorge, Tennessee between the TVA Ocoee #3 dam and the 1996 Olympic whitewater course. The bed topography consists of undulating bedrock ribs, which are formed at a consistent strike to the bedding and cleavage of the metagreywake and phyllite substrate. Ribs vary in their orientation to flow (from parallel to oblique) and amplitude among three study reaches. These bedrock ribs create a rough bed topography that substantially alters the local flow field and influences reach- scale roughness. In each reach, 300 tracer clasts were randomly selected from the existing bed material. Tracer clasts were surveyed and transport distances were calculated after five scheduled summer releases and a suite of slightly larger but sporadic winter releases. Transport distances were examined as a function of rib orientation and amplitude (reach scale), spatial proximity to bedrock ribs and standard deviation of the bed elevation (cross- section scale), and whether clasts were hydraulically shielded by surrounding clasts, incorporated in the armour layer, imbricated, and/or existed in a pothole, in addition to size and angularity. At the reach scale, where ribs are parallel to flow, lower reach-scale roughness leads to greater sediment transport capacity, sediment flux and transport distances because transport is uninhibited in the downstream direction. Preliminary results indicate that cross section scale characteristics of bed topography exert a greater control on transport distances than grain size.

Tidally induced residual current over the Malin Sea continental slope

NASA Astrophysics Data System (ADS)

Stashchuk, Nataliya; Vlasenko, Vasiliy; Hosegood, Phil; Nimmo-Smith, W. Alex M.

2017-05-01

Tidally induced residual currents generated over shelf-slope topography are investigated analytically and numerically using the Massachusetts Institute of Technology general circulation model. Observational support for the presence of such a slope current was recorded over the Malin Sea continental slope during the 88-th cruise of the RRS ;James Cook; in July 2013. A simple analytical formula developed here in the framework of time-averaged shallow water equations has been validated against a fully nonlinear nonhydrostatic numerical solution. A good agreement between analytical and numerical solutions is found for a wide range of input parameters of the tidal flow and bottom topography. In application to the Malin Shelf area both the numerical model and analytical solution predicted a northward moving current confined to the slope with its core located above the 400 m isobath and with vertically averaged maximum velocities up to 8 cm s-1, which is consistent with the in-situ data recorded at three moorings and along cross-slope transects.

Analysis of a general circulation model. II - Distribution of kinetic energy in the South Atlantic and Kuroshio/Oyashio systems

NASA Technical Reports Server (NTRS)

Garraffo, Zulema; Garzoli, Silvia L.; Haxby, William; Olson, Donald

1992-01-01

It was found (Garzoli et al., 1992) that the general circulation model of Semtner and Chervin (1992) provides accurate descriptions of the Brazil-Malvinas and the Kuroshio/Oyashio confluence systems, except for the fact that the model prediction shows less variability than that present in observations. This paper investigates the problem of model variability by analyzing the mean and the eddy kinetic energy from the model and comparing the values with the Geosat altimeter observations for the South Atlantic Ocean and for the Kuroshio system. It is found that, while the model shows transient eddy activity in the areas that overlap the Geosat observations, the energy level of the model transient motions is considerably smaller following an arch along the bottom topography. The same was found from the comparisons made with values obtained from FGGE and surface drifters. It is suggested that the model is poorly resolving instabilities in the confluence front, and is not resolving other transients appearing in regions of marked topography.

Complex Greenland outlet glacier flow captured

PubMed Central

Aschwanden, Andy; Fahnestock, Mark A.; Truffer, Martin

2016-01-01

The Greenland Ice Sheet is losing mass at an accelerating rate due to increased surface melt and flow acceleration in outlet glaciers. Quantifying future dynamic contributions to sea level requires accurate portrayal of outlet glaciers in ice sheet simulations, but to date poor knowledge of subglacial topography and limited model resolution have prevented reproduction of complex spatial patterns of outlet flow. Here we combine a high-resolution ice-sheet model coupled to uniformly applied models of subglacial hydrology and basal sliding, and a new subglacial topography data set to simulate the flow of the Greenland Ice Sheet. Flow patterns of many outlet glaciers are well captured, illustrating fundamental commonalities in outlet glacier flow and highlighting the importance of efforts to map subglacial topography. Success in reproducing present day flow patterns shows the potential for prognostic modelling of ice sheets without the need for spatially varying parameters with uncertain time evolution. PMID:26830316

The Influence of Topography on Subaqueous Sediment Gravity Flows and the Resultant Deposits: Examples from Deep-water Systems in Offshore Morocco and Offshore Trinidad

NASA Astrophysics Data System (ADS)

Deng, H.; Wood, L.; Overeem, I.; Hutton, E.

2016-12-01

Submarine topography has a fundamental control on the movement of sediment gravity flows as well as the distribution, morphology, and internal heterogeneity of resultant overlying, healing-phase, deep-water reservoirs. Some of the most complex deep-water topography is generated through both destructive and constructive mass transport processes. A series of numerical models using Sedflux software have been constructed over high resolution mass transport complexes (MTCs) top paleobathymetric surfaces mapped from 3D seismic data in offshore Morocco and offshore eastern Trinidad. Morocco's margin is characterized by large, extant rafted blocks and a flow perpendicular fabric. Trinidad's margin is characterized by muddier, plastic flows and isolated extrusive diapiric buttresses. In addition, Morocco's margin is a dry, northern latitude margin that lacks major river inputs, while Trinidad's margin is an equatorial, wet climate that is fed by the Orinoco River and delta. These models quantitatively delineate the interaction of healing-phase gravity flows on the tops of two very different topographies and provide insights into healing-phase reservoir distribution and stratigraphic trap development. Slopes roughness, curvatures, and surface shapes are measured and quantified relative to input points to quantify depositional surface character. A variety of sediment gravity flow types have been input and the resultant interval assessed for thickness and distribution relative to key topography parameters. Mathematical relationships are to be analyzed and compared with seismic data interpretation of healing-phase interval character, toward an improved model of gravity sedimentation and topography interactions.

Toward improved prediction of the bedrock depth underneath hillslopes: Bayesian inference of the bottom-up control hypothesis using high-resolution topographic data

NASA Astrophysics Data System (ADS)

Gomes, Guilherme J. C.; Vrugt, Jasper A.; Vargas, Eurípedes A.

2016-04-01

The depth to bedrock controls a myriad of processes by influencing subsurface flow paths, erosion rates, soil moisture, and water uptake by plant roots. As hillslope interiors are very difficult and costly to illuminate and access, the topography of the bedrock surface is largely unknown. This essay is concerned with the prediction of spatial patterns in the depth to bedrock (DTB) using high-resolution topographic data, numerical modeling, and Bayesian analysis. Our DTB model builds on the bottom-up control on fresh-bedrock topography hypothesis of Rempe and Dietrich (2014) and includes a mass movement and bedrock-valley morphology term to extent the usefulness and general applicability of the model. We reconcile the DTB model with field observations using Bayesian analysis with the DREAM algorithm. We investigate explicitly the benefits of using spatially distributed parameter values to account implicitly, and in a relatively simple way, for rock mass heterogeneities that are very difficult, if not impossible, to characterize adequately in the field. We illustrate our method using an artificial data set of bedrock depth observations and then evaluate our DTB model with real-world data collected at the Papagaio river basin in Rio de Janeiro, Brazil. Our results demonstrate that the DTB model predicts accurately the observed bedrock depth data. The posterior mean DTB simulation is shown to be in good agreement with the measured data. The posterior prediction uncertainty of the DTB model can be propagated forward through hydromechanical models to derive probabilistic estimates of factors of safety.

Interlaboratory comparison measurements of aspheres

NASA Astrophysics Data System (ADS)

Schachtschneider, R.; Fortmeier, I.; Stavridis, M.; Asfour, J.; Berger, G.; Bergmann, R. B.; Beutler, A.; Blümel, T.; Klawitter, H.; Kubo, K.; Liebl, J.; Löffler, F.; Meeß, R.; Pruss, C.; Ramm, D.; Sandner, M.; Schneider, G.; Wendel, M.; Widdershoven, I.; Schulz, M.; Elster, C.

2018-05-01

The need for high-quality aspheres is rapidly growing, necessitating increased accuracy in their measurement. A reliable uncertainty assessment of asphere form measurement techniques is difficult due to their complexity. In order to explore the accuracy of current asphere form measurement techniques, an interlaboratory comparison was carried out in which four aspheres were measured by eight laboratories using tactile measurements, optical point measurements, and optical areal measurements. Altogether, 12 different devices were employed. The measurement results were analysed after subtracting the design topography and subsequently a best-fit sphere from the measurements. The surface reduced in this way was compared to a reference topography that was obtained by taking the pointwise median across the ensemble of reduced topographies on a 1000 × 1000 Cartesian grid. The deviations of the reduced topographies from the reference topography were analysed in terms of several characteristics including peak-to-valley and root-mean-square deviations. Root-mean-square deviations of the reduced topographies from the reference topographies were found to be on the order of some tens of nanometres up to 89 nm, with most of the deviations being smaller than 20 nm. Our results give an indication of the accuracy that can currently be expected in form measurements of aspheres.

Three-Dimensional Structure of the Circulation Induced by a Shoaling Topographic Wave

NASA Astrophysics Data System (ADS)

Mizuta, G.; Hogg, N. G.

2003-12-01

Rectification of Rossby wave energy has been proposed as a mechanism for the maintenance of the recirculation cell of the Gulf Stream (Hogg 1988; Rizzoli et al. 1995). We investigated the three-dimensional structure of potential-vorticity flux and a mean flow induced by a topographic wave incident over a bottom slope analytically and numerically, focusing on the limit that bottom friction is the dominant dissipation process. In this limit it is shown that the topographic wave cannot be a steady source of the potential vorticity outside the bottom Ekman layer. Instead, the distribution of potential vorticity is determined from the initial transient of the topographic wave. This potential vorticity and the heat flux by the topographic wave at the bottom determine the mean flow, and give a relation between the horizontal and vertical scales of the mean flow. When the horizontal scale of the mean flow is larger than the internal deformation radius, the mean flow is almost constant with depth independent of whether or not the topographic wave is trapped near the bottom. Then the mean flow at the bottom is proportional to the divergence of vertically integrated Reynolds stress ∫ -D0 /line{u'v'} dz. This divergence, which is caused by bottom friction, is large when the group velocity, cg and the vertical scale, μ -1 of the wave motion are small. Thus the mean flow tends to be large where cg and μ -1 become small, and decreases as the topographic wave is dissipated by bottom friction. Since bottom friction also dissipates the mean flow, the mean flow asymptotes to a constant value as the friction becomes zero. These features of the potential-vorticity flux and the mean flow are reproduced in numerical experiments. It is also shown from the numerical experiment that the distribution of the mean flow depends on the amplitude of the wave because of the Doppler shift of the wave by the mean flow. These feature of the mean flow are preserved when we used stratification and bottom topography resembling to those over the continental slope near the Gulf Stream. The transport of the mean flow is about 20 Sv when the wave amplitude is about 2 cm/s. These numbers are similiar to those observed in the Gulf Stream region.

Review of literature on the finite-element solution of the equations of two-dimensional surface-water flow in the horizontal plane

USGS Publications Warehouse

Lee, Jonathan K.; Froehlich, David C.

1987-01-01

Published literature on the application of the finite-element method to solving the equations of two-dimensional surface-water flow in the horizontal plane is reviewed in this report. The finite-element method is ideally suited to modeling two-dimensional flow over complex topography with spatially variable resistance. A two-dimensional finite-element surface-water flow model with depth and vertically averaged velocity components as dependent variables allows the user great flexibility in defining geometric features such as the boundaries of a water body, channels, islands, dikes, and embankments. The following topics are reviewed in this report: alternative formulations of the equations of two-dimensional surface-water flow in the horizontal plane; basic concepts of the finite-element method; discretization of the flow domain and representation of the dependent flow variables; treatment of boundary conditions; discretization of the time domain; methods for modeling bottom, surface, and lateral stresses; approaches to solving systems of nonlinear equations; techniques for solving systems of linear equations; finite-element alternatives to Galerkin's method of weighted residuals; techniques of model validation; and preparation of model input data. References are listed in the final chapter.

Surficial geology of the sea floor in Long Island Sound offshore of Orient Point, New York

USGS Publications Warehouse

McMullen, K.Y.; Poppe, L.J.; Danforth, W.W.; Blackwood, D.S.; Schaer, J.D.; Guberski, M.R.; Wood, D.A.; Doran, E.F.

2011-01-01

The U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration (NOAA), and the Connecticut Department of Environmental Protection (CT DEP) are working cooperatively to map and interpret features of the sea floor along the northeastern coast of the United States. This report presents multibeam bathymetry and sidescan-sonar data obtained during NOAA survey H11446, which was conducted in a 12-km2 area in Long Island Sound offshore of Orient Point, NY. In addition, sediment and photographic data from 26 stations obtained during a USGS verification cruise are presented. Overall, the sea floor slopes gently seaward, but topography is more complex in sand-wave and boulder areas, which are evident in the multibeam and sidescan-sonar data from the study area. Sand waves generally have north-south-oriented crests with 10- to 20-m wavelengths. Sand-wave asymmetry indicates eastward net sediment transport in the east and westward net sediment transport in the northern and western parts of the study area. Areas with boulders on the sea floor are typically hummocky and are part of a glacial moraine system. Boulders are typically encrusted with seaweed, sponges, and anemones as shown in the bottom photography.

The Breakup of Temperature Inversions In Steep Valleys

NASA Astrophysics Data System (ADS)

Colette, A.; Street, R.

The purpose of this research is to model and provide a better understanding of tem- perature inversions breakup in steep valleys. The Advanced Regional Prediction Sys- tem (ARPS), a three-dimensional, compressible, and non-hydrostatic modeling tool developed by the Center for Analysis and Prediction of Storms at the University of Oklahoma was used. Many field studies indicate that the evolution of the convective and inversion layers are strongly dependant on the surrounding topography. In relatively open valleys, the convective boundary layer usually grows from the bottom of the valley while in steeper cases, the upslope morning winds affects the dynamic of the mixing layer resulting in the destruction of the inversion from its bottom and its top (see Whiteman 1980). ARPS allows one to perform accurate simulation of such situations. First, written in terrain following coordinates, it handles steep topographies; then its extensive radi- ation and surface flux packages provide a good treatment of land related processes. Moreover, ARPS accounts for the incidence angle of sunrays, differencing the ex- posed and non-exposed mountain slopes. However, it neglects the topographic shade which can delay the sunrise of a hour or more in steep valleys. A new subroutine described by Colette etal. 2002 is thus used to compute the projected shade on the surrounding topography. Simulations of temperature inversion breakup for various two-dimensional valleys are presented. The time scale of evolution of the mixing layer is in good agreement with field studies and, as expected, the convective boundary layer shows an asymmetry between east and west facing slopes. The different patterns of inversion breakup doc- umented by Whiteman are also reproduced. These simulations of idealized cases give a better understanding of inversion breakup in steep valleys. Our code is now being applied to a real case: the study of a peculiar wind, la Ora del Garda, caused by the interaction between a lake breeze and a valley wind in the Garda Valley (Northern Italy). Preliminary simulations will be presented. The support of AC by TotalFinaElf and RS by the Physical Meteorology Program of NSF and the VTMX Program of DoE is appreciated.

An algorithm-based topographical biomaterials library to instruct cell fate

PubMed Central

Unadkat, Hemant V.; Hulsman, Marc; Cornelissen, Kamiel; Papenburg, Bernke J.; Truckenmüller, Roman K.; Carpenter, Anne E.; Wessling, Matthias; Post, Gerhard F.; Uetz, Marc; Reinders, Marcel J. T.; Stamatialis, Dimitrios; van Blitterswijk, Clemens A.; de Boer, Jan

2011-01-01

It is increasingly recognized that material surface topography is able to evoke specific cellular responses, endowing materials with instructive properties that were formerly reserved for growth factors. This opens the window to improve upon, in a cost-effective manner, biological performance of any surface used in the human body. Unfortunately, the interplay between surface topographies and cell behavior is complex and still incompletely understood. Rational approaches to search for bioactive surfaces will therefore omit previously unperceived interactions. Hence, in the present study, we use mathematical algorithms to design nonbiased, random surface features and produce chips of poly(lactic acid) with 2,176 different topographies. With human mesenchymal stromal cells (hMSCs) grown on the chips and using high-content imaging, we reveal unique, formerly unknown, surface topographies that are able to induce MSC proliferation or osteogenic differentiation. Moreover, we correlate parameters of the mathematical algorithms to cellular responses, which yield novel design criteria for these particular parameters. In conclusion, we demonstrate that randomized libraries of surface topographies can be broadly applied to unravel the interplay between cells and surface topography and to find improved material surfaces. PMID:21949368

Specific expression of the vacuolar iron transporter, TgVit, causes iron accumulation in blue-colored inner bottom segments of various tulip petals.

PubMed

Momonoi, Kazumi; Tsuji, Toshiaki; Kazuma, Kohei; Yoshida, Kumi

2012-01-01

Several flowers of Tulipa gesneriana exhibit a blue color in the bottom segments of the inner perianth. We have previously reported the inner-bottom tissue-specific iron accumulation and expression of the vacuolar iron transporter, TgVit1, in tulip cv. Murasakizuisho. To clarify whether the TgVit1-dependent iron accumulation and blue-color development in tulip petals are universal, we analyzed anthocyanin, its co-pigment components, iron contents and the expression of TgVit1 mRNA in 13 cultivars which show a blue color in the bottom segments of the inner perianth accompanying yellow- and white-colored inner-bottom petals. All of the blue bottom segments contained the same anthocyanin component, delphinidin 3-rutinoside. The flavonol composition varied with cultivar and tissue part. The major flavonol in the bottom segments of the inner perianth was rutin. The iron content in the upper part was less than that in the bottom segments of the inner perianth. The iron content in the yellow and white petals was higher in the bottom segment of the inner perianth than in the upper tissues. TgVit1 mRNA expression was apparent in all of the bottom tissues of the inner perianth. The result of a reproduction experiment by mixing the constituents suggests that the blue coloration in tulip petals is generally caused by iron complexation to delphinidin 3-rutinoside and that the iron complex is solubilized and stabilized by flavonol glycosides. TgVit1-dependent iron accumulation in the bottom segments of the inner perianth might be controlled by an unknown system that differentiated the upper parts and bottom segments of the inner perianth.

High-resolution Topography of PACMANUS and DESMOS Hydrothermal Fields in the Manus Basin through ROV "FAXIAN"

NASA Astrophysics Data System (ADS)

Luan, Z.; Ma, X.; Yan, J.; Zhang, X.; Zheng, C.; Sun, D.

2016-12-01

High-resolution topography can help us deeply understand the seabed and related geological processes (e.g. hydrothermal/cold spring systems) in the deep sea areas. However, such studies are rare in China due to the limit of deep-sea detection technology. Here, we report the advances of the application of ROV in China and the newly measured high-resolution topographical data in PACMANUS and DESMOS hydrothermal fields. In June 2015, the ROV "FAXIAN" with a multibeam system (Kongsberg EM2040) was deployed to measure the topography of PACMANUS and DESMOS hydrothermal fields in the Manus basin. A composite positioning system on the ROV provided long baseline (LBL) navigation and positioning during measurements, giving a high positioning accuracy (better than 0.5m). The raw bathymetric data obtained were processed using CARIS HIPS (version 8.1). Based on the high-resolution data, we can describe the topographical details of the PACMANUS and DESMOS hydrothermal fields. High-resolution terrain clearly shows the detailed characters of the topography in the PACMANUS hydrothermal field, and some cones are corresponding to the pre discovered hydrothermal points and volcanic area. Most hydrothermal points in the PACMANUS hydrothermal field mainly developed on the steep slopes with a gradient exceeding 30 °. In contrast, the DESMOS field is a caldera that is approximately 250 m deep in the center with an E-W diameter of approximately1 km and a N-S diameter of approximately 2 km. The seafloor is much steeper on the inner side of the circular fracture. Two highlands occur in the northern and the southern flanks of the caldera. Video record indicated that pillow lava, sulfide talus, breccia, anhydrite, outcrops, and sediment all appeared in the DESMOS field. This is the first time for the ROV "FAXIAN" to be used in near-bottom topography measurements in the hydrothermal fields, opening a window of deep-sea researches in China.

Combining split-beam and dual-frequency identification sonars to estimate abundance of anadromous fishes in the Roanoke River, North Carolina

USGS Publications Warehouse

Hughes, Jacob B.; Hightower, Joseph E.

2015-01-01

Riverine hydroacoustic techniques are an effective method for evaluating abundance of upstream migrating anadromous fishes. To use these methods in the Roanoke River, North Carolina, at a wide site with uneven bottom topography, we used a combination of split-beam sonar and dual-frequency identification sonar (DIDSON) deployments. We aimed a split-beam sonar horizontally to monitor midchannel and near-bottom zones continuously over the 3-month spring monitoring periods in 2010 and 2011. The DIDSON was rotated between seven cross-channel locations (using a vertical aim) and nearshore regions (using horizontal aims). Vertical deployment addressed blind spots in split-beam coverage along the bottom and provided reliable information about the cross-channel and vertical distributions of upstream migrants. Using a Bayesian framework, we modeled sonar counts within four cross-channel strata and apportioned counts by species using species proportions from boat electrofishing and gill netting. Modeled estimates (95% credible intervals [CIs]) of total upstream migrants in 2010 and 2011 were 2.5 million (95% CI, 2.4–2.6 million) and 3.6 million (95% CI, 3.4–3.9 million), respectively. Results indicated that upstream migrants are extremely shore- and bottom-oriented, suggesting nearshore DIDSON monitoring improved the accuracy and precision of our estimates. This monitoring protocol and model may be widely applicable to river systems regardless of their cross-sectional width or profile.

Role of naturally occurring gas hydrates in sediment transport

DOE Office of Scientific and Technical Information (OSTI.GOV)

McIver, R.D.

1982-06-01

Naturally occurring gas hydrates have the potential to store enormous volumes of both gas and water in semi-solid form in ocean-bottom sediments and then to release that gas and water when the hydrate's equilibrium condition are disturbed. Therefore, hydrates provide a potential mechanism for transporting large volumes of sediments. Under the combined low bottom-water temperatures and moderate hydrostatic pressures that exist over most of the continental slopes and all of the continental rises and abyssal plains, hydrocarbon gases at or near saturation in the interstitial waters of the near-bottom sediments will form hydrates. The gas can either be autochthonous, microbiallymore » produced gas, or allochthonous, catagenic gas from deeper sediments. Equilibrium conditions that stabilize hydrated sediments may be disturbed, for example, by continued sedimentation or by lowering of sea level. In either case, some of the solid gas-water matrix decomposes. Released gas and water volume exceeds the volume occupied by the hydrate, so the internal pressure rises - drastically if large volumes of hydrate are decomposed. Part of the once rigid sediment is converted to a gas- and water-rich, relatively low density mud. When the internal pressure, due to the presence of the compressed gas or to buoyancy, is sufficiently high, the overlying sediment may be lifted and/or breached, and the less dense, gas-cut mud may break through. Such hydrate-related phenomena can cause mud diapirs, mud volcanos, mud slides, or turbidite flows, depending on sediment configuration and bottom topography. 4 figures.« less

Impact of the rheological layering of the lithosphere on the topography generated by sublithospheric density anomalies: Insights from analog modeling

NASA Astrophysics Data System (ADS)

Sembroni, A.; Globig, J.; Rozel, A.; Faccenna, C.; Funiciello, F.; Fernandez, M.

2013-12-01

Density anomalies located beneath the lithosphere are thought to generate dynamic topography at the surface of the Earth. Tomographic models are often used to infer the later variations of the density field in the mantle. Surface topography can then be computed using analytical solutions or numerical simulations of mantle convection. It has been shown that the viscosity profile of the upper mantle has a strong influence on the magnitude and spectral signature of surface topography and uplift rate. Here we present results from analogue modeling of the interaction between a rising ball-shaped density anomaly and the lithosphere in an isoviscous, isothermal Newtonian mantle system. Preliminary data show that surface topography is strongly influenced not only by mantle viscosity but also by density and viscosity profiles of the lithosphere. Our apparatus consists of a plexiglass square box (40x40x50 cm3) filled with glucose syrup. From the bottom a silicon ball was free to rise up until impinging a silicon plate floating on top of the syrup, mimicking the lithosphere. In order to investigate the role of lithospheric thickness and layered continental crust on stress partitioning, maximum dynamic topography, uplift rate and signal wavelength, two different configurations were tested: homogeneous lithosphere and stratified lithosphere including a low-viscosity lower crust. The topographic evolution of the surface was tracked using a laser scanning the top of the apparatus. The rise of the density anomaly was recorded by a side camera. We observe that a thick and then more resistant lithosphere makes up to 2 times lower and laterally wider topographic signatures. Layered lithospheres including a decoupling lower crust decrease the equilibrium topography and its lateral extend by ~30% to 40%. Most importantly, the uplift rate is strongly affected by the choice of lithosphere model. Both lithosphere width and the presence of a decoupling lower crust may modify the uplift rate by a factor 3. Thus, depending on the lithosphere rheology, we show that uplift rate may vary by one order of magnitude, for the same density anomaly and mantle viscosity. This result shows that surface uplift rate can be used to infer the viscosity of the upper mantle in specific Earth regions only if the rheology of the lithosphere is well constrained. With respect to previous approaches, whether numerical or analog modeling of dynamic topography, our experiments represent a new attempt to investigate the propagation of normal stresses generated by mantle flow through a rheologically stratified lithosphere and its resulting topographic signal.

A Synthesis and Comparison of Approaches for Quantifying Coral Reef Structure

NASA Astrophysics Data System (ADS)

Duvall, M. S.; Hench, J. L.

2016-02-01

The complex physical structures of coral reefs provide substrate for benthic organisms, surface area for material fluxes, and have been used as a predictor of reef-fish biomass and biodiversity. Coral reef topography has a first order effect on reef hydrodynamics by imposing drag forces and increasing momentum and scalar dispersion. Despite its importance, quantifying reef topography remains a challenge, as it is patchy and discontinuous while also varying over orders of magnitude in spatial scale. Previous studies have quantified reef structure using a range of 1D and 2D metrics that estimate vertical roughness, which is the departure from a flat geometric profile or surface. However, there is no general mathematical or conceptual framework by which to apply or compare these roughness metrics. While the specific calculations of different metrics vary, we propose that they can be classified into four categories based on: 1) vertical relief relative to a reference height; 2) gradients in vertical relief; 3) surface contour distance; or 4) variations in roughness with scale. We apply metrics from these four classes to idealized reef topography as well as natural reef topography data from Moorea, French Polynesia. Through the use of idealized profiles, we demonstrate the potential for reefs with different morphologies to possess the same value for some scale-dependent metrics (i.e. classes 1-3). Due to the superposition of variable-scale roughness elements in reef topography, we find that multi-scale metrics (i.e. class 4) can better characterize structural complexity by capturing surface roughness across a range of spatial scales. In particular, we provide evidence of the ability of 1D continuous wavelet transforms to detect changes in dominant roughness scales on idealized topography as well as within real reef systems.

Coastal currents and mass transport of surface sediments over the shelf regions of Monterey Bay, California

USGS Publications Warehouse

Wolf, S.C.

1970-01-01

In Monterey Bay, the highest concentrations of medium and fine sands occur nearshore between ten and thirty fathoms. Silt and clay accumulate in greater depths. Contours of median diameter roughly parallel the isobaths. Fine-grained materials are supplied to the bay region from erosion of cliffs which partly surround Monterey Bay, from sediment laden river discharge, and from continual reworking of widespread Pleistocene and Recent sea floor sediments. These sediments in turn are picked up by coastal currents and distributed over the shelf regions by present day current regimes. Studies of bottom currents over the shelf regions and in Monterey Canyon have revealed patterns which vary with seasonal changes. Current patterns during August and September exhibit remarkable symmetry about the axis of Monterey Submarine Canyon. Central Shelf currents north and south of Monterey Canyon flowed northwest at an average rate of 0.2 knots and south at 0.3 knots respectively. On the North Shelf between January and March currents flowed east to southeast at 0.3-0.5 knots with mirror image patterns above the South Shelf during the same period. Irregular current flow in the canyon indicates a complex current structure with frequent shifts in counterclockwise and clockwise direction over very short periods of time. Bottom topography of the canyon complex often causes localization of canyon currents. One particular observation at a depth of 51 fathoms indicated up-canyon flow at a rate of 0.2 knots. Most of the observed currents are related to seasonal variations, upwelling, ocean swell patterns, and to changes in the California and Davidson currents. Changes in current regimes are reflected in the patterns of sediment distribution and transport. Sediment transport is chiefly parallel to the isobaths, particularly on the North and South Shelf regions. Complex dispersal patterns are observed near Monterey Canyon and Moss Landing Harbor jetties. Longshore currents move sediments southward except near Monterey Canyon which acts as a physiographic barrier and the extreme southern end of the bay where currents are non persistent. Some sediments are also transported offshore by rip currents and other agencies and deposited in deeper, quieter waters. Supply of sediments to the canyon head results in over-filling and steepening with subsequent mass movement of sediments seaward followed by deposition in channels and on the broad deep sea fan. ?? 1970.

Characterizing wave- and current- induced bottom shear stress: U.S. middle Atlantic continental shelf

USGS Publications Warehouse

Dalyander, P. Soupy; Butman, Bradford; Sherwood, Christopher R.; Signell, Richard P.; Wilkin, John L.

2013-01-01

Waves and currents create bottom shear stress, a force at the seabed that influences sediment texture distribution, micro-topography, habitat, and anthropogenic use. This paper presents a methodology for assessing the magnitude, variability, and driving mechanisms of bottom stress and resultant sediment mobility on regional scales using numerical model output. The analysis was applied to the Middle Atlantic Bight (MAB), off the U.S. East Coast, and identified a tidally-dominated shallow region with relatively high stress southeast of Massachusetts over Nantucket Shoals, where sediment mobility thresholds are exceeded over 50% of the time; a coastal band extending offshore to about 30 m water depth dominated by waves, where mobility occurs more than 20% of the time; and a quiescent low stress region southeast of Long Island, approximately coincident with an area of fine-grained sediments called the “Mud Patch”. The regional high in stress and mobility over Nantucket Shoals supports the hypothesis that fine grain sediment winnowed away in this region maintains the Mud Patch to the southwest. The analysis identified waves as the driving mechanism for stress throughout most of the MAB, excluding Nantucket Shoals and sheltered coastal bays where tides dominate; however, the relative dominance of low-frequency events varied regionally, and increased southward toward Cape Hatteras. The correlation between wave stress and local wind stress was lowest in the central MAB, indicating a relatively high contribution of swell to bottom stress in this area, rather than locally generated waves. Accurate prediction of the wave energy spectrum was critical to produce good estimates of bottom shear stress, which was sensitive to energy in the long period waves.

Big Fans

NASA Image and Video Library

2018-03-05

Shown in this image from NASA's Mars Reconnaissance Orbiter (MRO) are alluvial fans, fan-shaped deposits emerging from regions of steep topography. Alluvial fans on Mars are thought to be ancient and record past episodes of flowing water. This image shows part of one of those fans, which has been eroded. The old stream channels now stand above the rest of the fan as ridges, mostly in the southern (bottom) part of the image. This can occur because the channel materials are more resistant to erosion; perhaps they had larger grains (gravel) or because minerals deposited from the water cemented together. https://photojournal.jpl.nasa.gov/catalog/PIA22332

Topographic coupling of surface and internal Kelvin waves. [of ocean

NASA Technical Reports Server (NTRS)

Chao, S.-Y.

1980-01-01

An analysis is presented for computing the diffraction of barotropic Kelvin waves by a localized topographical irregularity on flat-bottom ocean with an arbitrary vertical stratification. It was shown that all baroclinic Kelvin waves will be generated downstream of the bump, with the first baroclinic mode having the largest amplitude. The Poincare waves predominate in the lowest modes, and are more directionally anisotropic. It was concluded that baroclinic Poincare waves radiating offshore from the bump topography could contribute to the internal wave field in the open ocean and provide an alternative mechanism to dissipate the barotropic tides.

Enhanced open ocean storage of CO2 from shelf sea pumping.

PubMed

Thomas, Helmuth; Bozec, Yann; Elkalay, Khalid; de Baar, Hein J W

2004-05-14

Seasonal field observations show that the North Sea, a Northern European shelf sea, is highly efficient in pumping carbon dioxide from the atmosphere to the North Atlantic Ocean. The bottom topography-controlled stratification separates production and respiration processes in the North Sea, causing a carbon dioxide increase in the subsurface layer that is ultimately exported to the North Atlantic Ocean. Globally extrapolated, the net uptake of carbon dioxide by coastal and marginal seas is about 20% of the world ocean's uptake of anthropogenic carbon dioxide, thus enhancing substantially the open ocean carbon dioxide storage.

Advances in Ice Penetrating Radar

NASA Astrophysics Data System (ADS)

Paden, J. D.

2016-12-01

Radars have been employed for ice remote sensing since the mid-twentieth century. The original application in radioglaciology was to obtain ice thickness: an essential parameter in ice flux calculations and boundary condition in ice flow models. Later, radars were used to estimate basal conditions and track laterally persistent features in the ice. The Center for Remote Sensing of Ice Sheet's recent hardware advances include multichannel systems and radar suites covering the usable frequency spectrum. These advances coupled with increased interest in the polar regions result in a concomitant exponential growth in data. We focus on a few results that have come from these changes. Multichannel radar systems improved clutter rejection and enabled 3D imaging. Using computer vision algorithms, we have automated the process of extracting the ice bottom surface in 3D imagery for complex topographies including narrow glacier channels where the ice surface and ice bottom merge together within the 3D images. We present results of wide swath imaging which have enabled narrow, 2-3 km wide, glacier channels to be fully imaged in a single pass. When radar data are available across the frequency spectrum, we have the ability to enhance target detection and measure frequency dependent properties. For example, we can couple HF sounder measurements in warmer ice where scattering attenuates and hides the signal of interest with VHF sounder measurements in cooler ice which have much improved resolution from a single flight line. We present examples of improved bed detection with coupled HF and VHF imagery in a temperate to cold ice transition that show the strong frequency dependence of englacial scattering. To handle the increased data rate, we developed a standard processing chain and data product for CReSIS radar systems, including legacy systems. Application specific GIS tools are an essential part and enable us to merge other data products during data analysis. By using imagery, gravity, mass conservation, etc., we improve the accuracy of ice bottom tracking. We present examples of the integration of these information sources to produce improved ice thickness estimates and show examples of data products which span more than two decades.

Studies on interface curvature during vertical Bridgman growth of InP in a flat-bottom container

NASA Astrophysics Data System (ADS)

Rudolph, P.; Matsumoto, F.; Fukuda, T.

1996-01-01

A simplified numerical simulation of the dynamic behaviour of the solid-liquid interface curvature during modified vertical Bridgman growth of 2 inch InP single crystals, in a flat-bottom container, with a seed of the same diameter is presented. The results agree with striation patterns observed by transmission X-ray topography. A nearly flat interface with slightly constant concavity has been ascertained in the front half of the grown ingots. It can be assumed that such a steady interface morphology is one of the basic requirements for the observed twin-free and reduced dislocation growth in this region. In an attempt to optimize the shape of the melting point isotherm in the last-to-freeze part of the crystals, the axial temperature gradient, the seed length, the growth velocity, the melt temperature and the conditions of heat transfer (different ambient atmospheres and plugs) as well as the temperature profile in the top region above the encapsulant have been varied in the model.

Erosion rates as a potential bottom-up control of forest structural characteristics in the Sierra Nevada Mountains.

PubMed

Milodowski, David T; Mudd, Simon M; Mitchard, Edward T A

2015-01-01

The physical characteristics of landscapes place fundamental constraints on vegetation growth and ecosystem function. In actively eroding landscapes, many of these characteristics are controlled by long-term erosion rates: increased erosion rates generate steeper topography and reduce the depth and extent of weathering, limiting moisture storage capacity and impacting nutrient availability. Despite the potentially important bottom-up control that erosion rates place on substrate characteristics, the relationship between the two is largely unexplored. We investigate spatial variations in aboveground biomass (AGB) across a structurally diverse mixed coniferous/deciduous forest with an order of magnitude erosion-rate gradient in the Northern Californian Sierra Nevada, USA, using high resolution LiDAR data and field plots. Mean basin slope, a proxy for erosion rate, accounts for 32% of variance in AGB within our field area (P < 0.001), considerably outweighing the effects of mean annual precipitation, temperature, and bedrock lithology. This highlights erosion rate as a potentially important, but hitherto unappreciated, control on AGB and forest structure.

The results of initial analysis of OSTA-1/Ocean Color Experiment (OCE) imagery

NASA Technical Reports Server (NTRS)

Kim, H. H.; Hart, W. D.

1982-01-01

Ocean view images from the Ocean Color Experiment (OCE) were produced at three widely separated locations on the Earth. Digital computer enhancement and band ratioing techniques were applied to radiometrically corrected OCE spectral data to emphasize patterns of chlorophyll distribution and, in one shallow, clear water case, bottom topography. The chlorophyll pattern in the Yellow Sea between China and Korea was evident in a scene produced from Shuttle Orbit 24. The effects of the discharge from the Yangtze and other rivers were also observed. Two scenes from orbits 30 and 32 revealed the movement of patches of plankton in the Gulf of Cadiz. Geometrical corrections to these images permitted the existing ocean current velocities in the vicinity to be deduced. The variability in water depth over the Grand Bahama Bank was estimated by using the blue-green OCE channel. The very clear water conditions in the area caused bottom reflected sunlight to produce a sensor signal which was related inversely to the depth of the water.

Remote geologic structural analysis of Yucca Flat

NASA Astrophysics Data System (ADS)

Foley, M. G.; Heasler, P. G.; Hoover, K. A.; Rynes, N. J.; Thiessen, R. L.; Alfaro, J. L.

1991-12-01

The Remote Geologic Analysis (RGA) system was developed by Pacific Northwest Laboratory (PNL) to identify crustal structures that may affect seismic wave propagation from nuclear tests. Using automated methods, the RGA system identifies all valleys in a digital elevation model (DEM), fits three-dimensional vectors to valley bottoms, and catalogs all potential fracture or fault planes defined by coplanar pairs of valley vectors. The system generates a cluster hierarchy of planar features having greater-than-random density that may represent areas of anomalous topography manifesting structural control of erosional drainage development. Because RGA uses computer methods to identify zones of hypothesized control of topography, ground truth using a well-characterized test site was critical in our evaluation of RGA's characterization of inaccessible test sites for seismic verification studies. Therefore, we applied RGA to a study area centered on Yucca Flat at the Nevada Test Site (NTS) and compared our results with both mapped geology and geologic structures and with seismic yield-magnitude models. This is the final report of PNL's RGA development project for peer review within the U.S. Department of Energy Office of Arms Control (OAC) seismic-verification community. In this report, we discuss the Yucca Flat study area, the analytical basis of the RGA system and its application to Yucca Flat, the results of the analysis, and the relation of the analytical results to known topography, geology, and geologic structures.

Fin field effect transistor directionality impacts printing of implantation shapes

NASA Astrophysics Data System (ADS)

Wang, Xiren; Granik, Yuri

2018-01-01

In modern integrated circuit (IC) fabrication processes, the photoresist receives considerable illumination energy that is reflected by underlying topography during optical lithography of implantation layers. Bottom antireflective coating (BARC) is helpful to mitigate the reflection. Often, however, BARC is not used, because its removal is technically challenging, in addition to its relatively high economic cost. Furthermore, the advanced technology nodes, such as 14/10-nm nodes, have introduced fin field effect transistor (FinFET), which makes reflection from nonuniform silicon substrates exceptionally complicated. Therefore, modeling reflection from topography becomes obligatory to accurately predict printing of implantation shapes. Typically, FinFET is always fixed in one direction in realistic designs. However, the same implantation rectangle may be oriented in either horizontal or vertical direction. Then, there are two types of relations between the critical dimension (CD) and FinFET, namely a parallel-to and a perpendicular-to relation. We examine the fin directionality impact on CD. We found that this impact may be considerable in some cases. We use our in-house rigorous optical topography simulator to reveal underlining physical reasons. One of the major causes of the CD differences is that in the parallel orientation, the solid sidewalls of the fins conduct considerable light reflections unlike for the perpendicular orientation. This finding can aid the compact modeling in optical proximity correction of implantation masks.

Low-Amplitude Topographic Features and Textures on the Moon: Initial Results from Detrended Lunar Orbiter Laser Altimeter (LOLA) Topography

NASA Technical Reports Server (NTRS)

Kreslavsky, Mikhail A.; Head, James W.; Neumann, Gregory A.; Zuber, Maria T.; Smith, David E.

2016-01-01

Global lunar topographic data derived from ranging measurements by the Lunar Orbiter Laser Altimeter (LOLA) onboard LRO mission to the Moon have extremely high vertical precision. We use detrended topography as a means for utilization of this precision in geomorphological analysis. The detrended topography was calculated as a difference between actual topography and a trend surface defined as a median topography in a circular sliding window. We found that despite complicated distortions caused by the non-linear nature of the detrending procedure, visual inspection of these data facilitates identification of low-amplitude gently-sloping geomorphic features. We present specific examples of patterns of lava flows forming the lunar maria and revealing compound flow fields, a new class of lava flow complex on the Moon. We also highlight the identification of linear tectonic features that otherwise are obscured in the images and topographic data processed in a more traditional manner.

Sensitivity of the ocean overturning circulation to wind and mixing: theoretical scalings and global ocean models

NASA Astrophysics Data System (ADS)

Nikurashin, Maxim; Gunn, Andrew

2017-04-01

The meridional overturning circulation (MOC) is a planetary-scale oceanic flow which is of direct importance to the climate system: it transports heat meridionally and regulates the exchange of CO2 with the atmosphere. The MOC is forced by wind and heat and freshwater fluxes at the surface and turbulent mixing in the ocean interior. A number of conceptual theories for the sensitivity of the MOC to changes in forcing have recently been developed and tested with idealized numerical models. However, the skill of the simple conceptual theories to describe the MOC simulated with higher complexity global models remains largely unknown. In this study, we present a systematic comparison of theoretical and modelled sensitivity of the MOC and associated deep ocean stratification to vertical mixing and southern hemisphere westerlies. The results show that theories that simplify the ocean into a single-basin, zonally-symmetric box are generally in a good agreement with a realistic, global ocean circulation model. Some disagreement occurs in the abyssal ocean, where complex bottom topography is not taken into account by simple theories. Distinct regimes, where the MOC has a different sensitivity to wind or mixing, as predicted by simple theories, are also clearly shown by the global ocean model. The sensitivity of the Indo-Pacific, Atlantic, and global basins is analysed separately to validate the conceptual understanding of the upper and lower overturning cells in the theory.

Impact of lithospheric rheology on surface topography

NASA Astrophysics Data System (ADS)

Liao, K.; Becker, T. W.

2017-12-01

The expression of mantle flow such as due to a buoyant plume as surface topography is a classical problem, yet the role of rheological complexities could benefit from further exploration. Here, we investigate the topographic expressions of mantle flow by means of numerical and analytical approaches. In numerical modeling, both conventional, free-slip and more realistic, stress-free boundary conditions are applied. For purely viscous rheology, a high viscosity lithosphere will lead to slight overestimates of topography for certain settings, which can be understood by effectively modified boundary conditions. Under stress-free conditions, numerical and analytical results show that the magnitude of dynamic topography decreases with increasing lithosphere thickness (L) and viscosity (ηL), as L-1 and ηL-3. The wavelength of dynamic topography increases linearly with L and (ηL/ ηM) 1/3. We also explore the time-dependent interactions of a rising plume with the lithosphere. For a layered lithosphere with a decoupling weak lower crust embedded between stronger upper crust and lithospheric mantle, dynamic topography increases with a thinner and weaker lower crust. The dynamic topography saturates when the decoupling viscosity is 3-4 orders lower than the viscosity of upper crust and lithospheric mantle. We further explore the role of visco-elastic and visco-elasto-plastic rheologies.

The differential regulation of osteoblast and osteoclast activity by surface topography of hydroxyapatite coatings.

PubMed

Costa, Daniel O; Prowse, Paul D H; Chrones, Tom; Sims, Stephen M; Hamilton, Douglas W; Rizkalla, Amin S; Dixon, S Jeffrey

2013-10-01

The behavior of bone cells is influenced by the surface chemistry and topography of implants and scaffolds. Our purpose was to investigate how the topography of biomimetic hydroxyapatite (HA) coatings influences the attachment and differentiation of osteoblasts, and the resorptive activity of osteoclasts. Using strategies reported previously, we directly controlled the surface topography of HA coatings on polycaprolactone discs. Osteoblasts and osteoclasts were incubated on HA coatings having distinct isotropic topographies with submicrometer and micro-scale features. Osteoblast attachment and differentiation were greater on more complex, micro-rough HA surfaces (Ra ~2 μm) than on smoother topographies (Ra ~1 μm). In contrast, activity of the osteoclast marker tartrate-resistant acid phosphatase was greater on smoother than on micro-rough surfaces. Furthermore, scanning electron microscopy revealed the presence of resorption lacunae exclusively on smoother HA coatings. Inhibition of resorption on micro-rough surfaces was associated with disruption of filamentous actin sealing zones. In conclusion, HA coatings can be prepared with distinct topographies, which differentially regulate responses of osteoblasts, as well as osteoclastic activity and hence susceptibility to resorption. Thus, it may be possible to design HA coatings that induce optimal rates of bone formation and degradation specifically tailored for different applications in orthopedics and dentistry. Copyright © 2013 Elsevier Ltd. All rights reserved.

Circulation in the South China Sea during summer 2000 as obtained from observations and a generalized topography-following ocean model

NASA Astrophysics Data System (ADS)

Wang, Huiqun; Yuan, Yaochu; Guan, Weibing; Lou, Ruyun; Wang, Kangshan

2004-07-01

On the basis of the recently obtained hydrographic data in the South China Sea, the improved Princeton Ocean Model with a generalized topography-following coordinate system is used to study the circulation in the region during summer 2000. Several sensitivity experiments are carried out to achieve reasonable model parameters for the South China Sea (SCS). It is shown from the resting stratification experiments that the generalized topography-following coordinate scheme is better than the standard sigma grid scheme for reducing the pressure gradient errors. The combination of sea surface height anomaly derived from TOPEX/Poseidon and numerical results with both diagnostic and semidiagnostic simulations provides a consistent circulation pattern for the SCS in August, and the main circulation features can be summarized as follows: (1) There is a notable anticyclonic warm eddy southeast of Vietnam with a horizontal scale of ˜300 km, and there is a cyclonic cold eddy. The simultaneous existence of these cold and warm eddies is one of the important circulation characteristics in the SCS during summer 2000. (2) A secondary cold eddy is found east of Vietnam. (3) The northwestern part of the SCS is dominated by an anticyclonic circulation system. (4) There is also a secondary warm eddy southwest off the Luzon Island. (5) A cyclonic eddy is found west off the Borneo Island. (6) A western intensification phenomenon obviously occurs in the SCS. The dynamical mechanisms of the above-mentioned circulation pattern in the SCS are the interaction between the wind stress and bottom topography and the joint effect of baroclinicity and relief.

Hydrophobic Interaction Chromatography for Bottom-Up Proteomics Analysis of Single Proteins and Protein Complexes.

PubMed

Rackiewicz, Michal; Große-Hovest, Ludger; Alpert, Andrew J; Zarei, Mostafa; Dengjel, Jörn

2017-06-02

Hydrophobic interaction chromatography (HIC) is a robust standard analytical method to purify proteins while preserving their biological activity. It is widely used to study post-translational modifications of proteins and drug-protein interactions. In the current manuscript we employed HIC to separate proteins, followed by bottom-up LC-MS/MS experiments. We used this approach to fractionate antibody species followed by comprehensive peptide mapping as well as to study protein complexes in human cells. HIC-reversed-phase chromatography (RPC)-mass spectrometry (MS) is a powerful alternative to fractionate proteins for bottom-up proteomics experiments making use of their distinct hydrophobic properties.

Ecological sites: Organizational tool for outcome-based land management

USDA-ARS?s Scientific Manuscript database

Managing for sustained ecosystem services from rangelands involves complex interactions among soils, plant communities, topography and the prevailing environmental conditions across different land forms from local patches to entire landscapes. This complexity has contributed to prior difficulties in...

Classification of regimes of internal solitary waves transformation over a shelf-slope topography

NASA Astrophysics Data System (ADS)

Terletska, Kateryna; Maderich, Vladimir; Talipova, Tatiana; Brovchenko, Igor; Jung, Kyung Tae

2015-04-01

The internal waves shoal and dissipate as they cross abrupt changes of the topography in the coastal ocean, estuaries and in the enclosed water bodies. They can form near the coast internal bores propagating into the shallows and re-suspend seabed pollutants that may have serious ecological consequences. Internal solitary waves (ISW) with trapped core can transport masses of water and marine organisms for some distance. The transport of cold, low-oxygen waters results in nutrient pumping. These facts require development of classification of regimes of the ISWs transformation over a shelf-slope topography to recognize 'hot spots' of wave energy dissipation on the continental shelf. A new classification of regimes of internal solitary wave interaction with the shelf-slope topography in the framework of two-layer fluid is proposed. We introduce a new three-dimensional diagram based on parameters α ,β , γ. Here α is the nondimensional wave amplitude normalized on the thermocline thickness α = ain/h1 (α > 0), β is the blocking parameter introduced in (Talipova et al., 2013) that is the ratio of the height of the bottom layer on the the shelf step h2+ to the incident wave amplitude ain, β = h2+/ain (β > -3), and γ is the parameter inverse to the slope inclination (γ > 0.01). Two mechanisms are important during wave shoaling: (i) wave breaking resulting in mixing and (ii) changing of the polarity of the initial wave of depression on the slope. Range of the parameters at which wave breaking occurs can be defined using the criteria, obtained empirically (Vlasenko and Hutter, 2002). In the three-dimensional diagram this criteria is represented by the surface f1(β,γ) = 0 that separates the region of parameters where breaking takes place from the region without breaking. The polarity change surface f2(α,β) = 0 is obtained from the condition of equality of the depth of upper layer h1 to the depth of the lower layer h2. In the two-layer stratification waves of depression may be converted to wave of elevation at the 'turning point' (h2 = h1) as they propagate from deep water onto a shallow shelf. Thus intersecting surfaces f1 and f2 divide three-dimensional diagram into four zones. Zone I located above two surfaces and corresponds to the non breaking regime. Zone II lies above 'breaking' surfaces but below the surface of changing polarity and corresponds to regime of changing polarity without breaking. Zone III lies above surface of changing polarity but below 'breaking' surfaces and corresponds to regime of wave breaking without changing polarity. Zone IV that located below two surfaces and corresponds to the regime of wave breaking with changing polarity. Regimes predicted by diagram agree with results of numerical modelling, laboratory and observation data. Based on the proposed diagram the regions in α, β, γ space with a high energy dissipation of ISW passed over the shelf-slope topography are distinguished. References Talipova T., Terletska K., Maderich V, Brovchenko I., Jung K.T., Pelinovsky E. and Grimshaw R. 2013. Internal solitary wave transformation over the bottom step: loss of energy. Phys. Fluids, 25, 032110 Vlasenko V., Hutter K. 2002. Numerical Experiments on the Breaking of Solitary Internal Waves over a Slope-Shelf Topography. J. Phys. Oceanogr., 32 (6), 1779-1793

Mapping the mantle transition zone beneath the central Mid-Atlantic Ridge using Ps receiver functions.

NASA Astrophysics Data System (ADS)

Agius, M. R.; Rychert, C.; Harmon, N.; Kendall, J. M.

2017-12-01

Determining the mechanisms taking place beneath ridges is important in order to understand how tectonic plates form and interact. Of particular interest is establishing the depth at which these processes originate. Anomalies such as higher temperature within the mantle transition zone may be inferred seismically if present. However, most ridges are found in remote locations beneath the oceans restricting seismologists to use far away land-based seismometers, which in turn limits the imaging resolution. In 2016, 39 broadband ocean-bottom seismometers were deployed across the Mid-Atlantic Ridge, along the Romanche and Chain fracture zones as part of the PI-LAB research project (Passive Imaging of the Lithosphere and Asthenosphere Boundary). The one-year long seismic data is now retrieved and analysed to image the mantle transition zone beneath the ridge. We determine P-to-s (Ps) receiver functions to illuminate the 410- and 660-km depth mantle discontinuities using the extended multitaper deconvolution. The data from ocean-bottom seismometers have tilt and compliance noise corrections and is filtered between 0.05-0.2 Hz to enhance the signal. 51 teleseismic earthquakes generated hundreds of good quality waveforms, which are then migrated to depth in 3-D. The topography at the d410 deepens towards the west of the Romanche and Chain fracture zone by 15 km, whereas the topography of d660 shallows beneath the ridge between the two zones. Transition zone thickness thins from 5 to 20 km. Thermal anomalies determined from temperature relationships with transition zone thickness and depth variations of the d410 and d660 suggests hotter temperatures of about 200 K. Overall, the result suggests mid-ocean ridges may have associated thermal signatures as deep as the transition zone.

Anomalous sea surface structures as an object of statistical topography

NASA Astrophysics Data System (ADS)

Klyatskin, V. I.; Koshel, K. V.

2015-06-01

By exploiting ideas of statistical topography, we analyze the stochastic boundary problem of emergence of anomalous high structures on the sea surface. The kinematic boundary condition on the sea surface is assumed to be a closed stochastic quasilinear equation. Applying the stochastic Liouville equation, and presuming the stochastic nature of a given hydrodynamic velocity field within the diffusion approximation, we derive an equation for a spatially single-point, simultaneous joint probability density of the surface elevation field and its gradient. An important feature of the model is that it accounts for stochastic bottom irregularities as one, but not a single, perturbation. Hence, we address the assumption of the infinitely deep ocean to obtain statistic features of the surface elevation field and the squared elevation gradient field. According to the calculations, we show that clustering in the absolute surface elevation gradient field happens with the unit probability. It results in the emergence of rare events such as anomalous high structures and deep gaps on the sea surface almost in every realization of a stochastic velocity field.

Evidence for a Low Bulk Crustal Density for Mars from Gravity and Topography.

PubMed

Goossens, Sander; Sabaka, Terence J; Genova, Antonio; Mazarico, Erwan; Nicholas, Joseph B; Neumann, Gregory A

2017-08-16

Knowledge of the average density of the crust of a planet is important in determining its interior structure. The combination of high-resolution gravity and topography data has yielded a low density for the Moon's crust, yet for other terrestrial planets the resolution of the gravity field models has hampered reasonable estimates. By using well-chosen constraints derived from topography during gravity field model determination using satellite tracking data, we show that we can robustly and independently determine the average bulk crustal density directly from the tracking data, using the admittance between topography and imperfect gravity. We find a low average bulk crustal density for Mars, 2582 ± 209 kg m -3 . This bulk crustal density is lower than that assumed until now. Densities for volcanic complexes are higher, consistent with earlier estimates, implying large lateral variations in crustal density. In addition, we find indications that the crustal density increases with depth.

Photometric stereo endoscopy.

PubMed

Parot, Vicente; Lim, Daryl; González, Germán; Traverso, Giovanni; Nishioka, Norman S; Vakoc, Benjamin J; Durr, Nicholas J

2013-07-01

While color video endoscopy has enabled wide-field examination of the gastrointestinal tract, it often misses or incorrectly classifies lesions. Many of these missed lesions exhibit characteristic three-dimensional surface topographies. An endoscopic system that adds topographical measurements to conventional color imagery could therefore increase lesion detection and improve classification accuracy. We introduce photometric stereo endoscopy (PSE), a technique which allows high spatial frequency components of surface topography to be acquired simultaneously with conventional two-dimensional color imagery. We implement this technique in an endoscopic form factor and demonstrate that it can acquire the topography of small features with complex geometries and heterogeneous optical properties. PSE imaging of ex vivo human gastrointestinal tissue shows that surface topography measurements enable differentiation of abnormal shapes from surrounding normal tissue. Together, these results confirm that the topographical measurements can be obtained with relatively simple hardware in an endoscopic form factor, and suggest the potential of PSE to improve lesion detection and classification in gastrointestinal imaging.

Nuclear Fuel Traces Definition in Storage Ponds of Research VVR-2 and OR Reactors in NRC 'Kurchatov Institute'

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stepanov, Alexey; Simirskii, Iurii; Stepanov, Vyacheslav

2015-07-01

The Gas Plant complex is the experimental base of the Institute of Nuclear Reactors, which is part of the Kurchatov Institute. In 1954 the commissioning of the first Soviet water-cooled water-moderated research reactor VVR-2 on enriched uranium, and until 1983 the complex operated two research water-cooled water-moderated reactors 3 MW (VVR-2) and 300 kW (OR) capacity, which were dismantled in connection with the overall upgrades of the complex. The complex has three storage ponds in the reactor building. They are sub-surface vessels filled with water (the volume of water in each is about 6 m{sup 3}). In 2007-2013 the spentmore » nuclear fuel from storages was removed for processing to 'Mayk'. Survey of Storage Ponds by Underwater Collimated Spectrometric System shows a considerable layer of slime on the bottom of ponds and traces of spent nuclear fuel in one of the storage. For determination qualitative and the quantitative composition of radionuclide we made complex α-, β-, γ- spectrometric research of water and bottom slimes from Gas Plant complex storage ponds. We found the spent nuclear fuel in water and bottom slime in all storage ponds. Specific activity of radionuclides in the bottom slime exceeded specific activity of radionuclides in the ponds water and was closed to levels of high radioactive waste. Analysis of the obtained data and data from earlier investigation of reactor MR storage ponds showed distinctions of specific activity of uranium and plutonium radionuclides. (authors)« less

Creation of Functional Micro/Nano Systems through Top-down and Bottom-up Approaches

PubMed Central

Wong, Tak-Sing; Brough, Branden; Ho, Chih-Ming

2009-01-01

Mimicking nature’s approach in creating devices with similar functional complexity is one of the ultimate goals of scientists and engineers. The remarkable elegance of these naturally evolved structures originates from bottom-up self-assembly processes. The seamless integration of top-down fabrication and bottom-up synthesis is the challenge for achieving intricate artificial systems. In this paper, technologies necessary for guided bottom-up assembly such as molecular manipulation, molecular binding, and the self assembling of molecules will be reviewed. In addition, the current progress of synthesizing mechanical devices through top-down and bottom-up approaches will be discussed. PMID:19382535

Geophysical study of the San Juan Mountains batholith complex, southwestern Colorado

USGS Publications Warehouse

Drenth, Benjamin J.; Keller, G. Randy; Thompson, Ren A.

2012-01-01

One of the largest and most pronounced gravity lows over North America is over the rugged San Juan Mountains of southwestern Colorado (USA). The mountain range is coincident with the San Juan volcanic field (SJVF), the largest erosional remnant of a widespread mid-Cenozoic volcanic field that spanned much of the southern Rocky Mountains. A buried, low-density silicic batholith complex related to the volcanic field has been the accepted interpretation of the source of the gravity low since the 1970s. However, this interpretation was based on gravity data processed with standard techniques that are problematic in the SJVF region. The combination of high-relief topography, topography with low densities, and the use of a common reduction density of 2670 kg/m3produces spurious large-amplitude gravity lows that may distort the geophysical signature of deeper features such as a batholith complex. We applied an unconventional processing procedure that uses geologically appropriate densities for the uppermost crust and digital topography to mostly remove the effect of the low-density units that underlie the topography associated with the SJVF. This approach resulted in a gravity map that provides an improved representation of deeper sources, including reducing the amplitude of the anomaly attributed to a batholith complex. We also reinterpreted vintage seismic refraction data that indicate the presence of low-velocity zones under the SJVF. Assuming that the source of the gravity low on the improved gravity anomaly map is the same as the source of the low seismic velocities, integrated modeling corroborates the interpretation of a batholith complex and then defines the dimensions and overall density contrast of the complex. Models show that the thickness of the batholith complex varies laterally to a significant degree, with the greatest thickness (∼20 km) under the western SJVF, and lesser thicknesses (<10 km) under the eastern SJVF. The largest group of nested calderas on the surface of the SJVF, the central caldera cluster, is not correlated with the thickest part of the batholith complex. This result is consistent with petrologic interpretations from recent studies that the batholith complex continued to be modified after cessation of volcanism and therefore is not necessarily representative of synvolcanic magma chambers. The total volume of the batholith complex is estimated to be 82,000–130,000 km3. The formation of such a large felsic batholith complex would inevitably involve production of a considerably greater volume of residuum, which could be present in the lower crust or uppermost mantle. The interpreted vertically averaged density contrast (–60 to –110 kg/m3), density (2590–2640 kg/m3), and seismic expression of the batholith complex are consistent with results of geophysical studies of other large batholiths in the western United States.

Nanominerals and nanoparticles in feed coal and bottom ash: implications for human health effects.

PubMed

Silva, Luis F O; da Boit, Kátia M

2011-03-01

Environmental and human health risk assessments of nanoparticle effects from coal and bottom ash require thorough characterisation of nanoparticles and their aggregates. In this manuscript, we expand the study of human exposure to nanosized particles from coal combustion sources (typically <100 nm in size), characterising the complex micromineralogy of these airborne combustion-derived nanomaterials. Our study focuses on bottom ash generated in the Santa Catarina power station (Brazil) which uses coal enriched in ashes, many potential elements (e.g. Cr and Ni) and pyrite. Transmission electron microscope data reveal nanoscale C deposits juxtaposed with and overgrown by slightly larger aluminosilicate (Al-Si) glassy spheres, oxides, silicates, carbonated, phosphates and sulphates. Iron oxides (mainly hematite and magnetite) are the main bottom ash products of the oxidation of pyrite, sometimes via intermediate pyrrhotite formation. The presence of iron oxide nanocrystals mixed with silicate glass particles emphasises the complexity of coal and bottom ash micromineralogy. Given the potentially bioreactive nature of such transition metal-bearing materials, there is likely to be an increased health risk associated with their inhalation.

Modeling of sedimentation and resuspension processes induced by intensive internal gravity waves in the coastal water systems with the use of the advection-diffusion equation for sediment concentration

NASA Astrophysics Data System (ADS)

Rouvinskaya, Ekaterina; Kurkin, Andrey; Kurkina, Oxana

2017-04-01

Intensive internal gravity waves influence bottom topography in the coastal zone. They induce substantial flows in the bottom layer that are essential for the formation of suspension and for the sediment transport. It is necessary to develop a mathematical model to predict the state of the seabed near the coastline to assess and ensure safety during the building and operation of the hydraulic engineering constructions. There are many models which are used to predict the impact of storm waves on the sediment transport processes. Such models for the impact of the tsunami waves are also actively developing. In recent years, the influence of intense internal waves on the sedimentation processes is also of a special interest. In this study we adapt one of such models, that is based on the advection-diffusion equation and allows to study processes of resuspension under the influence of internal gravity waves in the coastal zone, for solving the specific practical problems. During the numerical simulation precomputed velocity values are substituted in the advection - diffusion equation for sediment concentration at each time step and each node of the computational grid. Velocity values are obtained by the simulation of the internal waves' dynamics by using the IGW Research software package for numerical integration of fully nonlinear two-dimensional (vertical plane) system of equations of hydrodynamics of inviscid incompressible stratified fluid in the Boussinesq approximation bearing in mind the impact of barotropic tide. It is necessary to set the initial velocity and density distribution in the computational domain, bottom topography, as well as the value of the Coriolis parameter and, if necessary, the parameters of the tidal wave to carry out numerical calculations in the software package IGW Research. To initialize the background conditions of the numerical model we used data records obtained in the summer in the southern part of the shelf zone of Sakhalin Island from 1999 to 2003, provided by SakhNIRO, Russia. The process of assimilation of field data with numerical model is described in detail in our previous studies. It has been shown that process of suspension formation is quite intense for the investigated condition. Concentration of suspended particles significantly increases during the tide, especially on naturally uneven bottom relief as well as on the right boundary of the computational domain (near shoreline). Pronounced nepheloid layer is produced. Its thickness is about 5.6 m. At the phase of low tide, the process of suspension sediment production stops, and suspended particles are beginning to settle because of the small vertical velocities. Thickness of nepheloid layer is actively reduced. Obviously, this should lead to a change in the bottom relief. The presented results of research were obtained with the support of the Russian President's scholarship for young scientists and graduate students SP-2311.2016.5.

The Earth isn't flat: The (large) influence of topography on geodetic fault slip imaging.

NASA Astrophysics Data System (ADS)

Thompson, T. B.; Meade, B. J.

2017-12-01

While earthquakes both occur near and generate steep topography, most geodetic slip inversions assume that the Earth's surface is flat. We have developed a new boundary element tool, Tectosaur, with the capability to study fault and earthquake problems including complex fault system geometries, topography, material property contrasts, and millions of elements. Using Tectosaur, we study the model error induced by neglecting topography in both idealized synthetic fault models and for the cases of the MW=7.3 Landers and MW=8.0 Wenchuan earthquakes. Near the steepest topography, we find the use of flat Earth dislocation models may induce errors of more than 100% in the inferred slip magnitude and rake. In particular, neglecting topographic effects leads to an inferred shallow slip deficit. Thus, we propose that the shallow slip deficit observed in several earthquakes may be an artefact resulting from the systematic use of elastic dislocation models assuming a flat Earth. Finally, using this study as an example, we emphasize the dangerous potential for forward model errors to be amplified by an order of magnitude in inverse problems.

Strong topographic sheltering effects lead to spatially complex treeline advance and increased forest density in a subtropical mountain region.

PubMed

Greenwood, Sarah; Chen, Jan-Chang; Chen, Chaur-Tzuhn; Jump, Alistair S

2014-12-01

Altitudinal treelines are typically temperature limited such that increasing temperatures linked to global climate change are causing upslope shifts of treelines worldwide. While such elevational increases are readily predicted based on shifting isotherms, at the regional level the realized response is often much more complex, with topography and local environmental conditions playing an important modifying role. Here, we used repeated aerial photographs in combination with forest inventory data to investigate changes in treeline position in the Central Mountain Range of Taiwan over the last 60 years. A highly spatially variable upslope advance of treeline was identified in which topography is a major driver of both treeline form and advance. The changes in treeline position that we observed occurred alongside substantial increases in forest density, and lead to a large increase in overall forest area. These changes will have a significant impact on carbon stocking in the high altitude zone, while the concomitant decrease in alpine grassland area is likely to have negative implications for alpine species. The complex and spatially variable changes that we report highlight the necessity for considering local factors such as topography when attempting to predict species distributional responses to warming climate. © 2014 John Wiley & Sons Ltd.

Mesoscale dynamics in the Lofoten Basin - a sub-Arctic "hot spot" of oceanic variability

NASA Astrophysics Data System (ADS)

Volkov, D. L.; Belonenko, T. V.; Foux, V. R.

2012-12-01

A sub-Arctic "hot spot" of intense mesoscale variability is observed in the Lofoten Basin (LB) - a topographic depression with a maximum depth of about 3250 m, located in the Norwegian Sea. The standard deviation of sea surface height (SSH), measured with satellite altimetry, reaches nearly 15 cm in the center of the basin (Figure 1a). Using a space-time lagged correlation analysis of altimetry data, we discover a cyclonic propagation of the mesoscale SSH anomalies around the center of the LB with time-averaged phase speeds of 2-4 km/day, strongly linked to bottom topography (Figure 1c). The fact that surface drifter trajectories do not exhibit cyclonic circulation in the LB (Figure 1b) suggests that, at least in the upper ocean, satellite altimetry observes only the propagation of form without the corresponding transfer of mass. Linearly propagating wavelike disturbances that do not trap fluid inside are related to planetary or Rossby waves. Variations in topography may lead to the concentration of wave energy in certain regions or wave trapping. The dispersion analysis suggests that the observed wavelike cyclonic propagation of SSH anomalies in the LB is the manifestation of baroclinic topographic Rossby waves, that we term "the basin waves" in order to distinguish them from the other types of topographic waves, such as shelf or trench waves. We identify two modes of basin waves in the LB: a di-pole mode and a quadri-pole mode. The wavelength of each mode is about 500 km. The frequency of these modes is not constant and the phase speed varies from about 2 to 8 km/day. We show that the cyclonically rotating basin waves are responsible for the observed amplification of SSH variability in the LB. Because the baroclinic basin waves in the LB are probably associated with large vertical displacements of the thermocline and due to possible wave breaking events, they can play an important role in the mixing of the inflowing Atlantic Water with ambient water masses.(a) Standard deviation of SSH (cm) in the Nordic seas. Bottom topography is shown by 1000, 2000, and 3000 m isobaths. Abbreviations: GB - Greenland Basin, LB - Lofoten Basin, NB - Norwegian Basin, NwAC - Norwegian Atlantic Current, VP - Vøring Plateau. The study region is bounded by the blue rectangle. (b) Trajectories of 100 surface drifters (blue curves) that were present in the study region from September 1996 to August 2010 and their geostrophic velocity vectors (red arrows) averaged over 1°×0.25° (longitude × latitude) bins. (c) MDT_CNES_CLS09 mean dynamic topography (color, cm) and the velocities of eddy propagation (arrows). Two ellipsoidal contours, along which the dispersion relation was analyzed, are shown.

Coupling between apical tension and basal adhesion allow epithelia to collectively sense and respond to substrate topography over long distances.

PubMed

Broaders, Kyle E; Cerchiari, Alec E; Gartner, Zev J

2015-12-01

Epithelial sheets fold into complex topographies that contribute to their function in vivo. Cells can sense and respond to substrate topography in their immediate vicinity by modulating their interfacial mechanics, but the extent to which these mechanical properties contribute to their ability to sense substrate topography across length scales larger than a single cell has not been explored in detail. To study the relationship between the interfacial mechanics of single cells and their collective behavior as tissues, we grew cell-sheets on substrates engraved with surface features spanning macroscopic length-scales. We found that many epithelial cell-types sense and respond to substrate topography, even when it is locally nearly planar. Cells clear or detach from regions of local negative curvature, but not from regions with positive or no curvature. We investigated this phenomenon using a finite element model where substrate topography is coupled to epithelial response through a balance of tissue contractility and adhesive forces. The model correctly predicts the focal sites of cell-clearing and epithelial detachment. Furthermore, the model predicts that local tissue response to substrate curvature is a function of the surrounding topography of the substrate across long distances. Analysis of cell-cell and cell-substrate contact angles suggests a relationship between these single-cell interfacial properties, epithelial interfacial properties, and collective epithelial response to substrate topography. Finally, we show that contact angles change upon activation of oncogenes or inhibition of cell-contractility, and that these changes correlate with collective epithelial response. Our results demonstrate that in mechanically integrated epithelial sheets, cell contractility can be transmitted through multiple cells and focused by substrate topography to affect a behavioral response at distant sites.

Terrestrial laser scanning for delineating in-stream boulders and quantifying habitat complexity measures

USDA-ARS?s Scientific Manuscript database

Accurate stream topography measurement is important for many ecological applications such as hydraulic modeling and habitat characterization. Habitat complexity measures are often made using total station surveying or visual approximation, which can be subjective and have spatial resolution limitati...

Winds, Mountains, and Wildland Fire: Improved Understanding of Coupled Atmosphere-Topography-Fire Interactions Through Large-Eddy Simulation

NASA Astrophysics Data System (ADS)

Munoz-Esparza, D.; Sauer, J.; Linn, R.

2015-12-01

Anomalous and unexpected fire behavior in complex terrain continues to result in substantial loss of property and extremely dangerous conditions for firefighting field personnel. We briefly discuss proposed hypotheses of fire interactions with atmospheric flows over complex terrain that can lead to poorly-understood and potentially catastrophic scenarios. Then, our recent results of numerical investigations via large-eddy simulation of coupled atmosphere-topography-fire phenomenology with the Los Alamos National Laboratory, HiGrad-Firetec model are presented as an example of the potential for increased understanding of these complex processes. This investigation focuses on the influence of downslope surface wind enhancement through stably stratified flow over an isolated hill, and the resulting dramatic changes in fire behavior including spread rate, and intensity. Implications with respect to counter-intuitive fire behavior and extreme fire events are discussed. This work demonstrates a tremendous opportunity to immediately create safer and more effective policy for field personnel through improved predictability of atmospheric conditions over complex terrain

Mercury's lithospheric thickness and crustal density, as inferred from MESSENGER observations

NASA Astrophysics Data System (ADS)

James, P. B.; Mazarico, E.; Genova, A.; Smith, D. E.; Neumann, G. A.; Solomon, S. C.

2015-12-01

The gravity field and topography of Mercury measured by the MESSENGER spacecraft have provided insights into the thickness of the planet's elastic lithosphere, Te. We localized the HgM006 free-air gravity anomaly and gtmes_125v03 shape datasets to search for theoretical elastic thickness solutions that best fit a variety of localized coherence spectra between Bouguer gravity anomaly and topography. We adopted a crustal density of ρcrust =2700 kg m-3 for the Bouguer gravity correction, but density uncertainty did not markedly affect the elastic thickness estimates. A best-fit solution in the northern smooth plains (NSP) gives an elastic thickness of Te =30-60 km at the time of formation of topography for a range of ratios of top to bottom loading from 1 to 5. For a mechanical lithosphere with a thickness of ~2Te and a temperature of 1600 °C at the base, this solution is consistent with a geothermal gradient of 9-18 K km-1. A similar coherence analysis exterior to the NSP produces an elastic thickness estimate of Te =20-50 km, albeit with a poorer fit. Coherence in the northern hemisphere as a whole does not approach zero at any wavelength, because of the presence of variations in crustal thickness that are unassociated with elastic loading. The ratios and correlations of gravity and topography at intermediate wavelengths (harmonic degree l between 30 and 50) also constrain regional crustal densities. We localized gravity and topography with a moving Slepian taper and calculated regionally averaged crustal densities with the approximation ρcrust=Zl/(2πG), where Zl is the localized admittance and G is the gravitational constant. The only regional density estimates greater than 2000 kg m-3 for l=30 correspond to the NSP. Density estimates outside of the NSP were unreasonably low, even for highly porous crust. We attribute these low densities to the confounding effects of crustal thickness variations and Kaula filtering of the gravity dataset at the highest harmonic degrees, both of which tend to introduce a downward bias to crustal density estimation. An alternative analysis—which corrected for crustal thickness variability and was restricted to regions with gravity/topography coherence greater than 0.6—yielded an aggregate crustal density of ρcrust=2602 ± 470 kg m-3 for Mercury's high northern latitudes.

Allometric scaling of infraorbital surface topography in Homo.

PubMed

Maddux, Scott D; Franciscus, Robert G

2009-02-01

Infraorbital morphology is often included in phylogenetic and functional analyses of Homo. The inclusion of distinct infraorbital configurations, such as the "canine fossa" in Homo sapiens or the "inflated" maxilla in Neandertals, is generally based on either descriptive or qualitative assessments of this morphology, or simple linear chord and subtense measurements. However, the complex curvilinear surface of the infraorbital region has proven difficult to quantify through these traditional methods. In this study, we assess infraorbital shape and its potential allometric scaling in fossil Homo (n=18) and recent humans (n=110) with a geometric morphometric method well-suited for quantifying complex surface topographies. Our results indicate that important aspects of infraorbital shape are correlated with overall infraorbital size across Homo. Specifically, individuals with larger infraorbital areas tend to exhibit relatively flatter infraorbital surface topographies, taller and narrower infraorbital areas, sloped inferior orbital rims, anteroinferiorly oriented maxillary body facies, posteroinferiorly oriented maxillary processes of the zygomatic, and non-everted lateral nasal margins. In contrast, individuals with smaller infraorbital regions generally exhibit relatively depressed surface topographies, shorter and wider infraorbital areas, projecting inferior orbital rims, posteroinferiorly oriented maxillary body facies, anteroinferiorly oriented maxillary processes, and everted lateral nasal margins. These contrasts form a continuum and only appear dichotomized at the ends of the infraorbital size spectrum. In light of these results, we question the utility of incorporating traditionally polarized infraorbital morphologies in phylogenetic and functional analyses without due consideration of continuous infraorbital and facial size variation in Homo. We conclude that the essentially flat infraorbital surface topography of Neandertals is not unique and can be explained, in part, as a function of possessing large infraorbital regions, the ancestral condition for Homo. Furthermore, it appears likely that the diminutive infraorbital region of anatomically modern Homo sapiens is a primary derived trait, with related features such as depressed infraorbital surface topography expressed as correlated secondary characters.

Pattern-oriented modeling of agent-based complex systems: Lessons from ecology

USGS Publications Warehouse

Grimm, Volker; Revilla, Eloy; Berger, Uta; Jeltsch, Florian; Mooij, Wolf M.; Railsback, Steven F.; Thulke, Hans-Hermann; Weiner, Jacob; Wiegand, Thorsten; DeAngelis, Donald L.

2005-01-01

Agent-based complex systems are dynamic networks of many interacting agents; examples include ecosystems, financial markets, and cities. The search for general principles underlying the internal organization of such systems often uses bottom-up simulation models such as cellular automata and agent-based models. No general framework for designing, testing, and analyzing bottom-up models has yet been established, but recent advances in ecological modeling have come together in a general strategy we call pattern-oriented modeling. This strategy provides a unifying framework for decoding the internal organization of agent-based complex systems and may lead toward unifying algorithmic theories of the relation between adaptive behavior and system complexity.

Pattern-Oriented Modeling of Agent-Based Complex Systems: Lessons from Ecology

NASA Astrophysics Data System (ADS)

Grimm, Volker; Revilla, Eloy; Berger, Uta; Jeltsch, Florian; Mooij, Wolf M.; Railsback, Steven F.; Thulke, Hans-Hermann; Weiner, Jacob; Wiegand, Thorsten; DeAngelis, Donald L.

2005-11-01

Agent-based complex systems are dynamic networks of many interacting agents; examples include ecosystems, financial markets, and cities. The search for general principles underlying the internal organization of such systems often uses bottom-up simulation models such as cellular automata and agent-based models. No general framework for designing, testing, and analyzing bottom-up models has yet been established, but recent advances in ecological modeling have come together in a general strategy we call pattern-oriented modeling. This strategy provides a unifying framework for decoding the internal organization of agent-based complex systems and may lead toward unifying algorithmic theories of the relation between adaptive behavior and system complexity.

Numerical investigations with WRF about atmospheric features leading to heavy precipitation and flood events over the Central Andes' complex topography

NASA Astrophysics Data System (ADS)

Zamuriano, Marcelo; Brönnimann, Stefan

2017-04-01

It's known that some extremes such as heavy rainfalls, flood events, heatwaves and droughts depend largely on the atmospheric circulation and local features. Bolivia is no exception and while the large scale dynamics over the Amazon has been largely investigated, the local features driven by the Andes Cordillera and the Altiplano is still poorly documented. New insights on the regional atmospheric dynamics preceding heavy precipitation and flood events over the complex topography of the Andes-Amazon interface are added through numerical investigations of several case events: flash flood episodes over La Paz city and the extreme 2014 flood in south-western Amazon basin. Large scale atmospheric water transport is dynamically downscaled in order to take into account the complex topography forcing and local features as modulators of these events. For this purpose, a series of high resolution numerical experiments with the WRF-ARW model is conducted using various global datasets and parameterizations. While several mechanisms have been suggested to explain the dynamics of these episodes, they have not been tested yet through numerical modelling experiments. The simulations captures realistically the local water transport and the terrain influence over atmospheric circulation, even though the precipitation intensity is in general unrealistic. Nevertheless, the results show that Dynamical Downscaling over the tropical Andes' complex terrain provides useful meteorological data for a variety of studies and contributes to a better understanding of physical processes involved in the configuration of these events.

Mapping Arid Vegetation Species Distributions in the White Mountains, Eastern California, Using AVIRIS, Topography, and Geology

NASA Technical Reports Server (NTRS)

VandeVen, C.; Weiss, S. B.

2001-01-01

Our challenge is to model plant species distributions in complex montane environments using disparate sources of data, including topography, geology, and hyperspectral data. From an ecologist's point of view, species distributions are determined by local environment and disturbance history, while spectral data are 'ancillary.' However, a remote sensor's perspective says that spectral data provide picture of what vegetation is there, topographic and geologic data are ancillary. In order to bridge the gap, all available data should be used to get the best possible prediction of species distributions using complex multivariate techniques implemented on a GIS. Vegetation reflects local climatic and nutrient conditions, both of which can be modeled, allowing predictive mapping of vegetation distributions. Geologic substrate strongly affects chemical, thermal, and physical properties of soils, while climatic conditions are determined by local topography. As elevation increases, precipitation increases and temperature decreases. Aspect, slope, and surrounding topography determine potential insolation, so that south-facing slopes are warmer and north-facing slopes cooler at a given elevation. Topographic position (ridge, slope, canyon, or meadow) and slope angle affect sediment accumulation and soil depth. These factors combine as complex environmental gradients, and underlie many features of plant distributions. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data, digital elevation models, digitized geologic maps, and 378 ground control points were used to predictively map species distributions in the central and southern White Mountains, along the western boundary of the Basin and Range province. Minimum Noise Fraction (MNF) bands were calculated from the visible and near-infrared AVIRIS bands, and combined with digitized geologic maps and topographic variables using Canonical Correspondence Analysis (CCA). CCA allows for modeling species 'envelopes' in multidimensional environmental space, which can then be projected across entire landscapes.

Trends and variability of the atmosphere–ocean turbulent heat flux in the extratropical Southern Hemisphere

PubMed Central

Herman, Agnieszka

2015-01-01

Ocean–atmosphere interactions are complex and extend over a wide range of temporal and spatial scales. Among the key components of these interactions is the ocean–atmosphere (latent and sensible) turbulent heat flux (THF). Here, based on daily optimally-interpolated data from the extratropical Southern Hemisphere (south of 30°S) from a period 1985–2013, we analyze short-term variability and trends in THF and variables influencing it. It is shown that, in spite of climate-change-related positive trends in surface wind speeds over large parts of the Southern Ocean, the range of the THF variability has been decreasing due to decreasing air–water temperature and humidity differences. Occurrence frequency of very large heat flux events decreased accordingly. Remarkably, spectral analysis of the THF data reveals, in certain regions, robust periodicity at frequencies 0.03–0.04 day−1, corresponding exactly to frequencies of the baroclinic annular mode (BAM). Finally, it is shown that the THF is correlated with the position of the major fronts in sections of the Antarctic Circumpolar Current where the fronts are not constrained by the bottom topography and can adjust their position to the atmospheric and oceanic forcing, suggesting differential response of various sections of the Southern Ocean to the changing atmospheric forcing. PMID:26449323

On the nature of low-frequency currents over a shallow area of the southern coast of the Gulf of Finland

NASA Astrophysics Data System (ADS)

Lilover, M.-J.; Pavelson, J.; Kõuts, T.

2014-01-01

This study aims to explain those factors influencing low-frequency currents in a shallow unstratified sea with complex topography. Current velocity measurements using a bottom-mounted ADCP, deployed at 8 m depth on the slope of Naissaar Bank (northern entrance to the Tallinn Bay, Gulf of Finland), were performed over five weeks in late autumn 2008. A quasi-steady current from nine sub-periods (two weeks) was relatively well correlated with wind (mean correlation coefficient of 0.70). During moderate to fresh winds, the current is veered to the right relative to the wind direction, by angles in the range of 14-38°. The flow is directed to the left, relative to the wind direction in stronger wind conditions, indicating evidence of topographic forcing. The observed current was reasonably in accordance with the flow predicted by the classical Ekman model. The modelled current speeds (wind speeds < 11 m s- 1) appear to be overestimated by 3-6 cm s- 1, whilst the observed rotation angles were mostly less than those predicted by the model. Inclusion of barotropic forcing to the Ekman model improved its performance. The discrepancies between the model and observations are discussed in terms of topographic steering, baroclinic effect and surface wave induced forcing.

Challenges in Ocean Data Assimilation for the US West Coast

NASA Astrophysics Data System (ADS)

Li, Z.; Chao, Y.; Farrara, J.; Wang, X.

2006-12-01

A three-dimensional variational data assimilation (3DVAR) system has been developed for the Regional Ocean Modeling System (ROMS), and it is called ROMS-DAS. This system provides a capability of predicting meso- to small-scale variations with temporal scales from hours to days in the coastal oceans. To cope with the particular difficulties that result from complex coastlines and bottom topography, unbalanced flows and sparse observations, ROMS-DAS utilizes several novel strategies. These strategies include the implementation of three-dimensional anisotropic and inhomogeneous error correlations, application of particular weak dynamic constraints, and implementation of efficient and reliable algorithms for minimizing the cost function. The ROMS-DAS system was applied in field experiments for Monterey Bay during both 2003 (Autonomous Ocean Sampling Network - AOSN) and 2006 (MB06). These two experiments included intensive data collection from a variety of observational platforms, including satellites, airplanes, High Frequency radars, Acoustic Doppler Current Profilers, ships, drifters, buoys, autonomous underwater vehicles (AUV), and particularly a fleet of undersea gliders. Using these data sets, various data assimilation experiments were performed to address several major data assimilation challenges that arise from multi-scales structures, inhomogeneous properties, dynamical imbalance of the flow, and tides. Basing on these experiments, a set of strategies were formulated to deal with those challenges.

Characterisation of physical environmental factors on an intertidal sandflat, Manukau Harbour, New Zealand

USGS Publications Warehouse

Bell, R.G.; Hume, T.M.; Dolphin, T.J.; Green, M.O.; Walters, R.A.

1997-01-01

Physical environmental factors, including sediment characteristics, inundation time, tidal currents and wind waves, likely to influence the structure of the benthic community at meso-scales (1-100 m) were characterised for a sandflat off Wiroa Island (Manukau Harbour, New Zealand). In a 500 x 250 m study site, sediment characteristics and bed topography were mostly homogenous apart from patches of low-relief ridges and runnels. Field measurements and hydrodynamic modelling portray a complex picture of sediment or particulate transport on the intertidal flat, involving interactions between the larger scale tidal processes and the smaller scale wave dynamics (1-4 s; 1-15 m). Peak tidal currents in isolation are incapable of eroding bottom sediments, but in combination with near-bed orbital currents generated by only very small wind waves, sediment transport can be initiated. Work done on the bed integrated over an entire tidal cycle by prevailing wind waves is greatest on the elevated and flatter slopes of the study site, where waves shoal over a wider surf zone and water depths remain shallow e enough for wave-orbital currents to disturb the bed. The study also provided physical descriptors quantifying static and hydrodynamic (tidal and wave) factors which were used in companion studies on ecological spatial modelling of bivalve distributions and micro-scale sediment reworking and transport.

Reconstructing the paleo-topography and paleo-environmental features of the Sarno River plain (Italy) before the AD 79 eruption of Somma-Vesuvius volcanic complex

NASA Astrophysics Data System (ADS)

Vogel, Sebastian; Märker, Michael

2010-05-01

SSP1.4 Understanding mixed siliciclastic-volcaniclastic depositional systems and their relationships with geodynamics or GD2.3/CL4.14/GM5.8/MPRG22/SSP3.5 Reconstruction of ancient continents: Dating and characterization of paleosurfaces Reconstructing the paleo-topography and paleo-environmental features of the Sarno River plain (Italy) before the AD 79 eruption of Somma-Vesuvius volcanic complex Sebastian Vogel[1] & Michael Märker[1] [1] Heidelberg Academy of Sciences and Humanities c/o University of Tübingen, Rümelinstraße 19-23, D-72070 Tübingen, Germany. Within the geoarchaeological research project "Reconstruction of the Ancient Cultural Landscape of the Sarno River Plain" undertaken by the German Archaeological Institute in cooperation with the Heidelberg Academy of Sciences and Humanities/University of Tübingen a methodology was developed to model the spatial dispersion of volcanic deposits of Somma-Vesuvius volcanic complex since its Plinian eruption AD 79. Eventually, this was done to reconstruct the paleo-topography and paleo-environment of the Sarno River plain before the eruption AD 79. We collected, localized and digitized more than 1,800 core drillings to gain a representative network of stratigraphical information covering the entire plain. Besides other stratigraphical data including the characteristics of the pre-AD 79 stratum, the depth to the pre-AD 79 paleo-surface was identified from the available drilling documentation. Instead of applying a simple interpolation of the drilling data, we reconstructed the pre-AD 79 paleo-surface with a sophisticated geostatistical methodology using a machine based learning approach based on classification and regression trees. We hypothesize that the present-day topography reflects the ancient topography, because the eruption of AD 79 coated the ancient topography, leaving ancient physiographic elements of the Sarno River plain still recognizable in the present-day topography. Therefore, a high resolution, present-day digital elevation model (DEM) was generated. A detailed terrain analysis yielded 15 different primary and secondary topographic indices of the present-day DEM. Then, a classification and regression model was generated combining the present-day topographic indices to predict the depth of the pre-AD 79 surface. This model was calibrated with the measured depth of the pre-AD 79 surface from the drilling data. To gain a pre-AD 79 digital elevation model (DEM) the modeled depth of the pre-AD 79 surface was subtracted from the present-day DEM. To reconstruct some paleo-environmental features, such as the paleo-coast and the paleo-river network and its flood plain, the modeled pre-AD 79 DEM was compared with the classified characteristic of the pre-AD 79 stratum, identified from the drilling documentation. It is the first time that the paleo-topography and paleo-environmental features of the Sarno River basin were systematically reconstructed using a detailed database of input variables and sophisticated data mining technologies. Keywords: Sarno River Basin, Roman paleo-topography, paleo-environment, stratigraphical core drillings, Classification and Regression Trees

Topographic effects on infrasound propagation.

PubMed

McKenna, Mihan H; Gibson, Robert G; Walker, Bob E; McKenna, Jason; Winslow, Nathan W; Kofford, Aaron S

2012-01-01

Infrasound data were collected using portable arrays in a region of variable terrain elevation to quantify the effects of topography on observed signal amplitude and waveform features at distances less than 25 km from partially contained explosive sources during the Frozen Rock Experiment (FRE) in 2006. Observed infrasound signals varied in amplitude and waveform complexity, indicating propagation effects that are due in part to repeated local maxima and minima in the topography on the scale of the dominant wavelengths of the observed data. Numerical simulations using an empirically derived pressure source function combining published FRE accelerometer data and historical data from Project ESSEX, a time-domain parabolic equation model that accounted for local terrain elevation through terrain-masking, and local meteorological atmospheric profiles were able to explain some but not all of the observed signal features. Specifically, the simulations matched the timing of the observed infrasound signals but underestimated the waveform amplitude observed behind terrain features, suggesting complex scattering and absorption of energy associated with variable topography influences infrasonic energy more than previously observed. © 2012 Acoustical Society of America.

Numerical study on inter-tidal transports in coastal seas

NASA Astrophysics Data System (ADS)

Mao, Xinyan; Jiang, Wensheng; Zhang, Ping; Feng, Shizuo

2016-06-01

Inter-tidal (subtidal) transport processes in coastal sea depend on the residual motion, turbulent dispersion and relevant sources/sinks. In Feng et al. (2008), an updated Lagrangian inter-tidal transport equation, as well as new concept of Lagrangian inter-tidal concentration (LIC), has been proposed for a general nonlinear shallow water system. In the present study, the LIC is numerically applied for the first time to passive tracers in idealized settings and salinity in the Bohai Sea, China. Circulation and tracer motion in the three idealized model seas with different topography or coastline, termed as `flat-bottom', `stairs' and `cape' case, respectively, are simulated. The dependence of the LIC on initial tidal phase suggests that the nonlinearities in the stairs and cape cases are stronger than that in the flat-bottom case. Therefore, the `flat-bottom' case still meets the convectively weakly nonlinear condition. For the Bohai Sea, the simulation results show that most parts of it still meet the weakly nonlinear condition. However, the dependence of the LIS (Lagrangian inter-tidal salinity) on initial tidal phase is significant around the southern headland of the Liaodong Peninsula and near the mouth of the Yellow River. The nonlinearity in the former region is mainly related to the complicated coastlines, and that in the latter region is due to the presence of the estuarine salinity front.

Pathways of basal meltwater from Antarctic ice shelves: A model study

NASA Astrophysics Data System (ADS)

Kusahara, Kazuya; Hasumi, Hiroyasu

2014-09-01

We investigate spreading pathways of basal meltwater released from all Antarctic ice shelves using a circumpolar coupled ice shelf-sea ice-ocean model that reproduces major features of the Southern Ocean circulation, including the Antarctic Circumpolar Current (ACC). Several independent virtual tracers are used to identify detailed pathways of basal meltwaters. The spreading pathways of the meltwater tracers depend on formation sites, because the meltwaters are transported by local ambient ocean circulation. Meltwaters from ice shelves in the Weddell and Amundsen-Bellingshausen Seas in surface/subsurface layers are effectively advected to lower latitudes with the ACC. Although a large portion of the basal meltwaters is present in surface and subsurface layers, a part of the basal meltwaters penetrates into the bottom layer through active dense water formation along the Antarctic coastal margins. The signals at the seafloor extend along the topography, showing a horizontal distribution similar to the observed spreading of Antarctic Bottom Water. Meltwaters originating from ice shelves in the Weddell and Ross Seas and in the Indian sector significantly contribute to the bottom signals. A series of numerical experiments in which thermodynamic interaction between the ice shelf and ocean is neglected regionally demonstrates that the basal meltwater of each ice shelf impacts sea ice and/or ocean thermohaline circulation in the Southern Ocean. This article was corrected on 10 OCT 2014. See the end of the full text for details.

The numerical calculation of hydrological processes in the coastal zone of the Black Sea region in the city of Poti

NASA Astrophysics Data System (ADS)

Saghinadze, Ivane; Pkhakadze, Manana

2016-04-01

(The article was published with support of the Sh. Rustaveli National Science Foundation) The serious environmental problems started in Poti after transfer of the main flow of the river Rioni to the north. As a result the flooding of the city stopped, but the reduction of water consumption in the city channel, caused a decrease of the sediments carried away by the river, what leads to coastal erosion. The coast changes are connected with the movement of the waves and currents in the coastal part of the sea. In the paper, the three-dimensional mathematical model of sediment transport and coastal zone lithodynamics is developed. The finite element formulations for the problems of wave modes, coastal currents, sediment transport and evolution of the coastal zone of the sea, are given. The numerical algorithms, implemented in the form of software. Programs are allowing to bring the solutions of the tasks to numerical results. The numerical modeling was developed in three stages. In the first stage the topography of the coast and the initial geometry of the structures are considered as an input parameters. Then, coastal wave field is calculated for the conditions prescribed in the initial wave. In the second stage, the calculated wave field is used to estimate the spatial distribution of the radiation stresses near-bottom orbital velocity. In the third stage the coastal wave fields and flow fields are used in the sub-models of sediment transport and changes in the topography of the coast. In the numerical solution of basic equations of motion of the waves, coastal currents and changes in sea bottom topography we use: finite element, finite difference methods and the method of upper relaxation, Crank-Nicolson scheme. As an example, we are giving the results of research of the wave regime in the coastal area of the city of Poti (700X600m) adjacent to the port of Poti. The bottom profile, in this area is rather complicated. During the calculations of the average rise of sea level, 0.1m was taken as the initial value, which corresponds to the actual conditions The calculations have found that in the excitement, the sediment transport rates at a depth of 10-15m are almost zero. The maximum value of the velocity of sediment transport change within 0.006-0.0065m2/s.In the case of the western waves it is essential for longshore sediment transport directions, which varies in the range 0.0015-0.0022m2/s. The rate of sediment transport perpendicular to the bank in this case is irrelevant, and their maximum values in the range 0.00001-0.000017m2/s. Changes in the water depth varies from -0.25 to 0.29m. The rate of coastal erosion south of the port of 8-10 m/year.

Modeling Plankton Aggregation and Transport by Nonlinear Internal Waves Propagating Onshore.

NASA Astrophysics Data System (ADS)

Garwood, J. C.; Musgrave, R. C.; Franks, P. J. S.

2016-02-01

Many coastal benthic species have planktonic larval forms. These larvae must return to suitable adult habitat to allow recruitment to the breeding population. To a large extent these larvae are at the mercy of the ambient currents. However, simple vertical swimming behaviors may significantly enhance onshore or offshore transport of these organisms in certain coastal flows. Here we use models to investigate the interaction of nonlinear internal waves (NLIW) and swimming behaviors in determining plankton aggregation and cross-shelf transport. In a 2D, non-hydrostatic MITgcm with particle tracking, NLIW are generated and propagate onshore into a region of sloping bottom topography. Lagrangian and swimming particles representing plankton are introduced in the flow field to quantify transport and dispersion. Characteristics of the environment (bottom slope and stratification), as well as of the particles (source, depth, and swimming vs. passive) were varied to identify scenarios that would maximize transport or accumulation. Our results will be used to design experiments using swarms of autonomous buoyancy-controlled drifters to quantify transport and accumulation in the field.

Tsunami-Induced Nearshore Hydrodynamic Modeling using a 3D VOF Method: A Gulf of Mexico Case Study

NASA Astrophysics Data System (ADS)

Kian, R.; Horrillo, J. J.; Fang, N. Z.

2017-12-01

Long-term morphology changes can be interrupted by extreme events such as hurricanes and tsunamis. In particular, the impact of tsunamis on coastal erosion and accretion patterns is presently not well understood. In order to understand the sediment movement during coastal tsunami impact a numerical sediment transport model is added to a 3D VOF model. This model allows for spatially varying bottom sediment characteristics and entails functions for entrainment, bedload, and suspended load transport. As a case study, a Gulf of Mexico (GOM) coastal study site is selected to investigate the effect of a landslide-tsunami on the coastal morphology. The GOM is recognized as a vast and productive body of water with great ecologic and economic value. The morphodynamic response of the nearshore environment to the tsunami hydrodynamic forcing is influenced by many factors including bathymetry, topography, tsunami wave and current magnitude, and the characteristics of the local bottom substrate. The 3D model addition can account for all these factors. Finally, necessary strategies for reduction of the potential tsunami impact and management of the morphological changes are discussed.

Two-Dimensional Depth-Averaged Circulation Model CMS-M2D: Version 3.0, Report 2, Sediment Transport and Morphology Change

DTIC Science & Technology

2006-08-01

demonstrates symmetry of the methodology and capability to represent complex configurations of non -erodible cells. The bathymetric configuration (Figure...Army Engineer Rsearch and Development Center, Coastal and Hydraulics Laboratory. The upgrades chiefly concern capability to calculate sediment...hard bottom ( non -erodible bottom) to represent limestone and rocking coasts, as well as scour blankets at jetties, and (2) bottom avalanching to limit

Surface topography during neural stem cell differentiation regulates cell migration and cell morphology.

PubMed

Czeisler, Catherine; Short, Aaron; Nelson, Tyler; Gygli, Patrick; Ortiz, Cristina; Catacutan, Fay Patsy; Stocker, Ben; Cronin, James; Lannutti, John; Winter, Jessica; Otero, José Javier

2016-12-01

We sought to determine the contribution of scaffold topography to the migration and morphology of neural stem cells by mimicking anatomical features of scaffolds found in vivo. We mimicked two types of central nervous system scaffolds encountered by neural stem cells during development in vitro by constructing different diameter electrospun polycaprolactone (PCL) fiber mats, a substrate that we have shown to be topographically similar to brain scaffolds. We compared the effects of large fibers (made to mimic blood vessel topography) with those of small-diameter fibers (made to mimic radial glial process topography) on the migration and differentiation of neural stem cells. Neural stem cells showed differential migratory and morphological reactions with laminin in different topographical contexts. We demonstrate, for the first time, that neural stem cell biological responses to laminin are dependent on topographical context. Large-fiber topography without laminin prevented cell migration, which was partially reversed by treatment with rock inhibitor. Cell morphology complexity assayed by fractal dimension was inhibited in nocodazole- and cytochalasin-D-treated neural precursor cells in large-fiber topography, but was not changed in small-fiber topography with these inhibitors. These data indicate that cell morphology has different requirements on cytoskeletal proteins dependent on the topographical environment encountered by the cell. We propose that the physical structure of distinct scaffolds induces unique signaling cascades that regulate migration and morphology in embryonic neural precursor cells. J. Comp. Neurol. 524:3485-3502, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

ETR COMPLEX. CAMERA FACING SOUTH. FROM BOTTOM OF VIEW TO ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

ETR COMPLEX. CAMERA FACING SOUTH. FROM BOTTOM OF VIEW TO TOP: MTR, MTR SERVICE BUILDING, ETR CRITICAL FACILITY, ETR CONTROL BUILDING (ATTACHED TO ETR), ETR BUILDING (HIGH-BAY), COMPRESSOR BUILDING (ATTACHED AT LEFT OF ETR), HEAT EXCHANGER BUILDING (JUST BEYOND COMPRESSOR BUILDING), COOLING TOWER PUMP HOUSE, COOLING TOWER. OTHER BUILDINGS ARE CONTRACTORS' CONSTRUCTION BUILDINGS. INL NEGATIVE NO. 56-4105. Unknown Photographer, ca. 1956 - Idaho National Engineering Laboratory, Test Reactor Area, Materials & Engineering Test Reactors, Scoville, Butte County, ID

Forecasting of Storm Surge Floods Using ADCIRC and Optimized DEMs

NASA Technical Reports Server (NTRS)

Valenti, Elizabeth; Fitzpatrick, Patrick

2005-01-01

Increasing the accuracy of storm surge flood forecasts is essential for improving preparedness for hurricanes and other severe storms and, in particular, for optimizing evacuation scenarios. An interactive database, developed by WorldWinds, Inc., contains atlases of storm surge flood levels for the Louisiana/Mississippi gulf coast region. These atlases were developed to improve forecasting of flooding along the coastline and estuaries and in adjacent inland areas. Storm surge heights depend on a complex interaction of several factors, including: storm size, central minimum pressure, forward speed of motion, bottom topography near the point of landfall, astronomical tides, and most importantly, maximum wind speed. The information in the atlases was generated in over 100 computational simulations, partly by use of a parallel-processing version of the ADvanced CIRCulation (ADCIRC) model. ADCIRC is a nonlinear computational model of hydrodynamics, developed by the U.S. Army Corps of Engineers and the US Navy, as a family of two- and three-dimensional finite element based codes. It affords a capability for simulating tidal circulation and storm surge propagation over very large computational domains, while simultaneously providing high-resolution output in areas of complex shoreline and bathymetry. The ADCIRC finite-element grid for this project covered the Gulf of Mexico and contiguous basins, extending into the deep Atlantic Ocean with progressively higher resolution approaching the study area. The advantage of using ADCIRC over other storm surge models, such as SLOSH, is that input conditions can include all or part of wind stress, tides, wave stress, and river discharge, which serve to make the model output more accurate.

The neural processing of hierarchical structure in music and speech at different timescales

PubMed Central

Farbood, Morwaread M.; Heeger, David J.; Marcus, Gary; Hasson, Uri; Lerner, Yulia

2015-01-01

Music, like speech, is a complex auditory signal that contains structures at multiple timescales, and as such is a potentially powerful entry point into the question of how the brain integrates complex streams of information. Using an experimental design modeled after previous studies that used scrambled versions of a spoken story (Lerner et al., 2011) and a silent movie (Hasson et al., 2008), we investigate whether listeners perceive hierarchical structure in music beyond short (~6 s) time windows and whether there is cortical overlap between music and language processing at multiple timescales. Experienced pianists were presented with an extended musical excerpt scrambled at multiple timescales—by measure, phrase, and section—while measuring brain activity with functional magnetic resonance imaging (fMRI). The reliability of evoked activity, as quantified by inter-subject correlation of the fMRI responses, was measured. We found that response reliability depended systematically on musical structure coherence, revealing a topographically organized hierarchy of processing timescales. Early auditory areas (at the bottom of the hierarchy) responded reliably in all conditions. For brain areas at the top of the hierarchy, the original (unscrambled) excerpt evoked more reliable responses than any of the scrambled excerpts, indicating that these brain areas process long-timescale musical structures, on the order of minutes. The topography of processing timescales was analogous with that reported previously for speech, but the timescale gradients for music and speech overlapped with one another only partially, suggesting that temporally analogous structures—words/measures, sentences/musical phrases, paragraph/sections—are processed separately. PMID:26029037

The neural processing of hierarchical structure in music and speech at different timescales.

PubMed

Farbood, Morwaread M; Heeger, David J; Marcus, Gary; Hasson, Uri; Lerner, Yulia

2015-01-01

Music, like speech, is a complex auditory signal that contains structures at multiple timescales, and as such is a potentially powerful entry point into the question of how the brain integrates complex streams of information. Using an experimental design modeled after previous studies that used scrambled versions of a spoken story (Lerner et al., 2011) and a silent movie (Hasson et al., 2008), we investigate whether listeners perceive hierarchical structure in music beyond short (~6 s) time windows and whether there is cortical overlap between music and language processing at multiple timescales. Experienced pianists were presented with an extended musical excerpt scrambled at multiple timescales-by measure, phrase, and section-while measuring brain activity with functional magnetic resonance imaging (fMRI). The reliability of evoked activity, as quantified by inter-subject correlation of the fMRI responses, was measured. We found that response reliability depended systematically on musical structure coherence, revealing a topographically organized hierarchy of processing timescales. Early auditory areas (at the bottom of the hierarchy) responded reliably in all conditions. For brain areas at the top of the hierarchy, the original (unscrambled) excerpt evoked more reliable responses than any of the scrambled excerpts, indicating that these brain areas process long-timescale musical structures, on the order of minutes. The topography of processing timescales was analogous with that reported previously for speech, but the timescale gradients for music and speech overlapped with one another only partially, suggesting that temporally analogous structures-words/measures, sentences/musical phrases, paragraph/sections-are processed separately.

Laboratory simulations of the atmospheric mixed-layer in flow over complex topography

EPA Science Inventory

A laboratory study of the influence of complex terrain on the interface between a well-mixed boundary layer and an elevated stratified layer was conducted in the towing-tank facility of the U.S. Environmental Protection Agency. The height of the mixed layer in the daytime boundar...

Features of distribution and quality of organic matter in the bottom sediments of the Great Peter Bay (Sea of Japan)

NASA Astrophysics Data System (ADS)

Nesterova, Olga; Tregubova, Valentina; Semal, Victoria; Vasenev, Ivan

2017-04-01

The nature and distribution of organic carbon in marine waters depends on: 1) biological productivity and revenue of the autochthonous organic matter to the bottom; 2) sediment grain-size composition and conditions of dumping, which in turn depends of hydrothermic regime, topography, speed River mist and received major erosion products; 3) living conditions of the benthos (the quantity consumed of OM, gas regime of habitats, physiological capacity of heterotrophs). Autochthonous OM of phytoplankton plays a dominant role in the processes of formation of humus in aquatic conditions. Bottom sediments at different distance from the shoreline to depths from 0.5 up to 480 m of the Sea of Japan, which are formed in various conditions of facies, were selected as the objects of study. There is no clear relationships to the amount of organic matter in bottom sediments on the characteristics of the distribution and nature of living matter in the oceans and seas. This is because the process of sedimentation and fossilization of organic matter on the seabed and the ocean floor depends on many factors (currents, depth). Humus of studied bottom sediments in composition can be attributed mainly to the humic type. Nonhydrolyzing rest is 70-90%. This is characteristic of bottom sediments formed in facial types of small bays, internal coastal shelf bights and the underwater slope. At a fraction of the carbon of humic acids in organic matter, ranging from 4 to 80% of the amount of humic and fulvic acids. Fulvic acids content is much less. This is due to more favourable conservation situation of humic acids in precipitation with high content of organic matter, whereas fulvic acids in aquatic environments are more labile and almost not dumped. Despite the fact humic acids are not the most stable component (s), however, with increased content of humic acids, the mobility of organic matter and removing it from the bottom sediments are reduced. Internal shelf facies of the Great Peter Bay is the most diverse on the content of the various components of the bottom sediments humus. This is because modern processes of sedimentations and humus formation are active in this zone. The greatest concentration of organic matter in conjunction with the submarine and coastal slope at depths of more than 120 m. Slight variations parameters that characterize the composition of humus, are notable for all bottom sediments, as well as the marine environment, largely cancels the General conditions of humus formation around the basin of the Sea of Japan. Organic substance moving in the water colomn and transforms. Only sustainable to mineralization of organic substance reaches the bottom.

Photometric stereo endoscopy

PubMed Central

Parot, Vicente; Lim, Daryl; González, Germán; Traverso, Giovanni; Nishioka, Norman S.; Vakoc, Benjamin J.

2013-01-01

Abstract. While color video endoscopy has enabled wide-field examination of the gastrointestinal tract, it often misses or incorrectly classifies lesions. Many of these missed lesions exhibit characteristic three-dimensional surface topographies. An endoscopic system that adds topographical measurements to conventional color imagery could therefore increase lesion detection and improve classification accuracy. We introduce photometric stereo endoscopy (PSE), a technique which allows high spatial frequency components of surface topography to be acquired simultaneously with conventional two-dimensional color imagery. We implement this technique in an endoscopic form factor and demonstrate that it can acquire the topography of small features with complex geometries and heterogeneous optical properties. PSE imaging of ex vivo human gastrointestinal tissue shows that surface topography measurements enable differentiation of abnormal shapes from surrounding normal tissue. Together, these results confirm that the topographical measurements can be obtained with relatively simple hardware in an endoscopic form factor, and suggest the potential of PSE to improve lesion detection and classification in gastrointestinal imaging. PMID:23864015

Synergistic responses of superficial chemistry and micro topography of titanium created by wire-type electric discharge machining.

PubMed

Kataoka, Yu; Tamaki, Yukimichi; Miyazaki, Takashi

2011-01-01

Wire-type electric discharge machining has been applied to the manufacture of endosseous titanium implants as this computer associated technique allows extremely accurate complex sample shaping with an optimal micro textured surface during the processing. Since the titanium oxide layer is sensitively altered by each processing, the authors hypothesized that this technique also up-regulates biological responses through the synergistic effects of the superficial chemistry and micro topography. To evaluate the respective in vitro cellular responses on the superficial chemistry and micro topography of titanium surface processed by wire-type electric discharge, we used titanium-coated epoxy resin replica of the surface. An oxide layer on the titanium surface processed by wire-type electric discharge activated the initial responses of osteoblastic cells through an integrin-mediated mechanism. Since the mRNA expression of ALP on those replicas was up-regulated compared to smooth titanium samples, the micro topography of a titanium surface processed by wire-type electric discharge promotes the osteogenic potential of cells. The synergistic response of the superficial chemistry and micro topography of titanium processed by wire-type electric discharge was demonstrated in this study.

Near-bottom energy cascade from subinertial flows to ocean mixing in the northeastern South China Sea

NASA Astrophysics Data System (ADS)

Zhang, Y.; Liu, Z.; Zhao, Y.; Wang, W.; Li, J.; Xu, J.

2013-12-01

The motions with different scales in the bottom boundary layer are potentially important in controlling the water mass transportation. Many physical processes are involved in transferring energy from mesoscale to small-scale motions. Recent studies suggest that subinertial flows should be taken into account in the parameterization of deep-ocean mixing besides topography and tidal forcing. Here, we present the current velocity data obtained from 2 moored downward-looking ADCPs (Acoustic Doppler Current Profiler) and 1 RCM (Recording Current Meter) moored near the bottom boundary layer at a water depth of about 2000 m in the northeastern South China Sea from 2012 to 2013. Specifically, they include an ADCP 1200 kHz deployed at 30 m, an ADCP 300 kHz deployed at 110 m, and a RCM deployed at 40 m above the seafloor. Subinertial flows were calculated from the moored current velocity data by low-pass filtering with a cutoff frequency of 0.3 cycles per day (the local inertial period is about 35 hours). The horizontal subinertial flows were quite strong with average values of 2-5 cm/s. The strong downward vertical velocity with average values of 1-2 cm/s was observed during times of weak subinertial flows. The vertical propagation during both the times of weak and strong subinertial flows can also be shown by vector spectra of horizontal near-inertial current velocity. Turbulent kinetic energy production rate estimated indirectly with the variances of ADCP velocities will be compared with the subinertial kinetic energy to detect the processes of energy cascade from mesoscale motions to small-scale oscillations. The results presented in this study can provide an observational evidence for such energy cascade near the bottom boundary layer in the deep South China Sea.

Feasibility study for airborne fluorescence/reflectivity lidar bathymetry

NASA Astrophysics Data System (ADS)

Steinvall, Ove; Kautsky, Hans; Tulldahl, Michael; Wollner, Erika

2012-06-01

There is a demand from the authorities to have good maps of the coastal environment for their exploitation and preservation of the coastal areas. The goal for environmental mapping and monitoring is to differentiate between vegetation and non-vegetated bottoms and, if possible, to differentiate between species. Airborne lidar bathymetry is an interesting method for mapping shallow underwater habitats. In general, the maximum depth range for airborne laser exceeds the possible depth range for passive sensors. Today, operational lidar systems are able to capture the bottom (or vegetation) topography as well as estimations of the bottom reflectivity using e.g. reflected bottom pulse power. In this paper we study the possibilities and advantages for environmental mapping, if laser sensing would be further developed from single wavelength depth sounding systems to include multiple emission wavelengths and fluorescence receiver channels. Our results show that an airborne fluorescence lidar has several interesting features which might be useful in mapping underwater habitats. An example is the laser induced fluorescence giving rise to the emission spectrum which could be used for classification together with the elastic lidar signal. In the first part of our study, vegetation and substrate samples were collected and their spectral reflectance and fluorescence were subsequently measured in laboratory. A laser wavelength of 532 nm was used for excitation of the samples. The choice of 532 nm as excitation wavelength is motivated by the fact that this wavelength is commonly used in bathymetric laser scanners and that the excitation wavelengths are limited to the visual region as e.g. ultraviolet radiation is highly attenuated in water. The second part of our work consisted of theoretical performance calculations for a potential real system, and comparison of separability between species and substrate signatures using selected wavelength regions for fluorescence sensing.

Fabrication of Compositionally and Topographically Complex Robust Tissue Forms by 3D-Electrochemical Compaction of Collagen

PubMed Central

Younesi, Mousa; Islam, Anowarul; Kishore, Vipuil; Panit, Stefi; Akkus, Ozan

2015-01-01

Collagen solutions are phase-transformed to mechanically robust shell structures with curviplanar topographies using electrochemically induced pH gradients. The process enables rapid layer-by-layer deposition of collagen-rich mixtures over the entire field simultaneously to obtain compositionally diverse multilayered structures. In-plane tensile strength and modulus of the electrocompacted collagen sheet samples were 5200 -fold and 2300 -fold greater than that of uncompacted collagen samples. Out of plane compression tests showed 27 -fold and fold increase in compressive stress and 46 -fold increase in compressive modulus compared to uncompacted collagen sheets. Cells proliferated 4.9 times faster, and cellular area spread was 2.7 times greater on compacted collagen sheets. Electrocompaction also resulted in 2.9 times greater focal adhesion area than on regular collagen hydrogel. The reported improvements in the cell-matrix interactions with electrocompaction would serve to expedite the population of electrocompacted collagen scaffolds by cells. The capacity of the method to fabricate nonlinear curved topographies with compositional heterogeneous layers is demonstrated by sequential deposition of collagenhydroxyapatite layer over a collagen layer. The complex curved topography of the nasal structure is replicated by the electrochemical compaction method. The presented electrochemical compaction process is an enabling modality which holds significant promise for reconstruction of a wide spectrum of topographically complex systems such as joint surfaces, craniofacial defects, ears, nose or urogenital forms. PMID:26069162

Determining relative contributions of vegetation and topography to burn severity from LANDSAT imagery.

PubMed

Wu, Zhiwei; He, Hong S; Liang, Yu; Cai, Longyan; Lewis, Bernard J

2013-10-01

Fire is a dominant process in boreal forest landscapes and creates a spatial patch mosaic with different burn severities and age classes. Quantifying effects of vegetation and topography on burn severity provides a scientific basis on which forest fire management plans are developed to reduce catastrophic fires. However, the relative contribution of vegetation and topography to burn severity is highly debated especially under extreme weather conditions. In this study, we hypothesized that relationships of vegetation and topography to burn severity vary with fire size. We examined this hypothesis in a boreal forest landscape of northeastern China by computing the burn severity of 24 fire patches as the difference between the pre- and post-fire Normalized Difference Vegetation Index obtained from two Landsat TM images. The vegetation and topography to burn severity relationships were evaluated at three fire-size levels of small (<100 ha, n = 12), moderate (100-1,000 ha, n = 9), and large (>1,000 ha, n = 3). Our results showed that vegetation and topography to burn severity relationships were fire-size-dependent. The burn severity of small fires was primary controlled by vegetation conditions (e.g., understory cover), and the burn severity of large fires was strongly influenced by topographic conditions (e.g., elevation). For moderate fires, the relationships were complex and indistinguishable. Our results also indicated that the pattern trends of relative importance for both vegetation and topography factors were not dependent on fire size. Our study can help managers to design fire management plans according to vegetation characteristics that are found important in controlling burn severity and prioritize management locations based on the relative importance of vegetation and topography.

Determining Relative Contributions of Vegetation and Topography to Burn Severity from LANDSAT Imagery

NASA Astrophysics Data System (ADS)

Wu, Zhiwei; He, Hong S.; Liang, Yu; Cai, Longyan; Lewis, Bernard J.

2013-10-01

Fire is a dominant process in boreal forest landscapes and creates a spatial patch mosaic with different burn severities and age classes. Quantifying effects of vegetation and topography on burn severity provides a scientific basis on which forest fire management plans are developed to reduce catastrophic fires. However, the relative contribution of vegetation and topography to burn severity is highly debated especially under extreme weather conditions. In this study, we hypothesized that relationships of vegetation and topography to burn severity vary with fire size. We examined this hypothesis in a boreal forest landscape of northeastern China by computing the burn severity of 24 fire patches as the difference between the pre- and post-fire Normalized Difference Vegetation Index obtained from two Landsat TM images. The vegetation and topography to burn severity relationships were evaluated at three fire-size levels of small (<100 ha, n = 12), moderate (100-1,000 ha, n = 9), and large (>1,000 ha, n = 3). Our results showed that vegetation and topography to burn severity relationships were fire-size-dependent. The burn severity of small fires was primary controlled by vegetation conditions (e.g., understory cover), and the burn severity of large fires was strongly influenced by topographic conditions (e.g., elevation). For moderate fires, the relationships were complex and indistinguishable. Our results also indicated that the pattern trends of relative importance for both vegetation and topography factors were not dependent on fire size. Our study can help managers to design fire management plans according to vegetation characteristics that are found important in controlling burn severity and prioritize management locations based on the relative importance of vegetation and topography.

Spatial interpolation of river channel topography using the shortest temporal distance

NASA Astrophysics Data System (ADS)

Zhang, Yanjun; Xian, Cuiling; Chen, Huajin; Grieneisen, Michael L.; Liu, Jiaming; Zhang, Minghua

2016-11-01

It is difficult to interpolate river channel topography due to complex anisotropy. As the anisotropy is often caused by river flow, especially the hydrodynamic and transport mechanisms, it is reasonable to incorporate flow velocity into topography interpolator for decreasing the effect of anisotropy. In this study, two new distance metrics defined as the time taken by water flow to travel between two locations are developed, and replace the spatial distance metric or Euclidean distance that is currently used to interpolate topography. One is a shortest temporal distance (STD) metric. The temporal distance (TD) of a path between two nodes is calculated by spatial distance divided by the tangent component of flow velocity along the path, and the STD is searched using the Dijkstra algorithm in all possible paths between two nodes. The other is a modified shortest temporal distance (MSTD) metric in which both the tangent and normal components of flow velocity were combined. They are used to construct the methods for the interpolation of river channel topography. The proposed methods are used to generate the topography of Wuhan Section of Changjiang River and compared with Universal Kriging (UK) and Inverse Distance Weighting (IDW). The results clearly showed that the STD and MSTD based on flow velocity were reliable spatial interpolators. The MSTD, followed by the STD, presents improvement in prediction accuracy relative to both UK and IDW.

Iodine and freeze-drying enhanced high-resolution MicroCT imaging for reconstructing 3D intraneural topography of human peripheral nerve fascicles.

PubMed

Yan, Liwei; Guo, Yongze; Qi, Jian; Zhu, Qingtang; Gu, Liqiang; Zheng, Canbin; Lin, Tao; Lu, Yutong; Zeng, Zitao; Yu, Sha; Zhu, Shuang; Zhou, Xiang; Zhang, Xi; Du, Yunfei; Yao, Zhi; Lu, Yao; Liu, Xiaolin

2017-08-01

The precise annotation and accurate identification of the topography of fascicles to the end organs are prerequisites for studying human peripheral nerves. In this study, we present a feasible imaging method that acquires 3D high-resolution (HR) topography of peripheral nerve fascicles using an iodine and freeze-drying (IFD) micro-computed tomography (microCT) method to greatly increase the contrast of fascicle images. The enhanced microCT imaging method can facilitate the reconstruction of high-contrast HR fascicle images, fascicle segmentation and extraction, feature analysis, and the tracing of fascicle topography to end organs, which define fascicle functions. The complex intraneural aggregation and distribution of fascicles is typically assessed using histological techniques or MR imaging to acquire coarse axial three-dimensional (3D) maps. However, the disadvantages of histological techniques (static, axial manual registration, and data instability) and MR imaging (low-resolution) limit these applications in reconstructing the topography of nerve fascicles. Thus, enhanced microCT is a new technique for acquiring 3D intraneural topography of the human peripheral nerve fascicles both to improve our understanding of neurobiological principles and to guide accurate repair in the clinic. Additionally, 3D microstructure data can be used as a biofabrication model, which in turn can be used to fabricate scaffolds to repair long nerve gaps. Copyright © 2017 Elsevier B.V. All rights reserved.

Biodiversity of Jinggangshan Mountain: The Importance of Topography and Geographical Location in Supporting Higher Biodiversity

PubMed Central

Liu, Gang; Huang, Fang-Fang; Liu, Jin-Gang; Liao, Wen-Bo; Wang, Ying-Yong; Ren, Si-Jie; Chen, Chun-Quan; Peng, Shao-Lin

2015-01-01

Diversity is mainly determined by climate and environment. In addition, topography is a complex factor, and the relationship between topography and biodiversity is still poorly understood. To understand the role of topography, i.e., altitude and slope, in biodiversity, we selected Jinggangshan Mountain (JGM), an area with unique topography, as the study area. We surveyed plant and animal species richness of JGM and compared the biodiversity and the main geographic characteristics of JGM with the adjacent 4 mountains. Gleason’s richness index was calculated to assess the diversity of species. In total, 2958 spermatophyte species, 418 bryophyte species, 355 pteridophyte species and 493 species of vertebrate animals were recorded in this survey. In general, the JGM biodiversity was higher than that of the adjacent mountains. Regarding topographic characteristics, 77% of JGM’s area was in the mid-altitude region and approximately 40% of JGM’s area was in the 10°–20° slope range, which may support more vegetation types in JGM area and make it a biodiversity hotspot. It should be noted that although the impact of topography on biodiversity was substantial, climate is still a more general factor driving the formation and maintenance of higher biodiversity. Topographic conditions can create microclimates, and both climatic and topographic conditions contribute to the formation of high biodiversity in JGM. PMID:25763820

Small scale patches of suspended matter and phytoplankton in the Elbe River estuary, German Bight and tidal flats

NASA Technical Reports Server (NTRS)

Doerffer, R.; Fischer, J.; Stoessel, M.; Brockmann, C.; Grassl, H.

1989-01-01

Landsat 5 TM measurements are found suitable for study of small scale features in coastal waters; three independent factors, namely suspended matter concentration, atmospheric scattering, and sea-surface temperature, were extracted from all seven TM channels on the basis of factor analysis. The distribution of suspended matter in near-surface water layer and sea surface temperature is observable with a spatial resolution of at least 120 x 120 sq m. The high correlation between water depth and suspended matter distribution established by ship-gathered data supports the presently hypothesized control by bottom topography and wind-modified tidal currents of eddy and front formation.

ARC-1979-A79-7097

NASA Image and Video Library

1979-07-08

Range : 85,000 kilometers (53,000 miles) This photo of Jupiter's satellite Ganymede shows ancient cratered terrain. A variety of impact craters of different ages are shown. The brightest craters are the youngest. The ejecta blankets fade with age. The center shows a bright patch that represents the rebounding of the floor of the crater. The dirty ice has lost all topography except for faint circular patterns. Also shown are the 'Callisto type' curved troughs and ridges that mark an ancient enormous impact basin. The basin itself has been destroyed by later geologic processes. Only the ring features are preserved on the ancient surface. Near the bottom of the picture, these curved features are trumcated by the younger grooved terrain.

[Cortical potentials evoked to response to a signal to make a memory-guided saccade].

PubMed

Slavutskaia, M V; Moiseeva, V V; Shul'govskiĭ, V V

2010-01-01

The difference in parameters of visually guided and memory-guided saccades was shown. Increase in the memory-guided saccade latency as compared to that of the visually guided saccades may indicate the deceleration of saccadic programming on the basis of information extraction from the memory. The comparison of parameters and topography of evoked components N1 and P1 of the evoked potential on the signal to make a memory- or visually guided saccade suggests that the early stage of the saccade programming associated with the space information processing is performed predominantly with top-down attention mechanism before the memory-guided saccade and bottom-up mechanism before the visually guided saccade. The findings show that the increase in the latency of the memory-guided saccades is connected with decision making at the central stage of the saccade programming. We proposed that wave N2, which develops in the middle of the latent period of the memory-guided saccades, is correlated with this process. Topography and spatial dynamics of components N1, P1 and N2 testify that the memory-guided saccade programming is controlled by the frontal mediothalamic system of selective attention and left-hemispheric brain mechanisms of motor attention.

Multi-Scale and Object-Oriented Analysis for Mountain Terrain Segmentation and Geomorphological Assessment

NASA Astrophysics Data System (ADS)

Marston, B. K.; Bishop, M. P.; Shroder, J. F.

2009-12-01

Digital terrain analysis of mountain topography is widely utilized for mapping landforms, assessing the role of surface processes in landscape evolution, and estimating the spatial variation of erosion. Numerous geomorphometry techniques exist to characterize terrain surface parameters, although their utility to characterize the spatial hierarchical structure of the topography and permit an assessment of the erosion/tectonic impact on the landscape is very limited due to scale and data integration issues. To address this problem, we apply scale-dependent geomorphometric and object-oriented analyses to characterize the hierarchical spatial structure of mountain topography. Specifically, we utilized a high resolution digital elevation model to characterize complex topography in the Shimshal Valley in the Western Himalaya of Pakistan. To accomplish this, we generate terrain objects (geomorphological features and landform) including valley floors and walls, drainage basins, drainage network, ridge network, slope facets, and elemental forms based upon curvature. Object-oriented analysis was used to characterize object properties accounting for object size, shape, and morphometry. The spatial overlay and integration of terrain objects at various scales defines the nature of the hierarchical organization. Our results indicate that variations in the spatial complexity of the terrain hierarchical organization is related to the spatio-temporal influence of surface processes and landscape evolution dynamics. Terrain segmentation and the integration of multi-scale terrain information permits further assessment of process domains and erosion, tectonic impact potential, and natural hazard potential. We demonstrate this with landform mapping and geomorphological assessment examples.

Regional circulation around Heard and McDonald Islands and through the Fawn Trough, central Kerguelen Plateau

NASA Astrophysics Data System (ADS)

van Wijk, Esmee M.; Rintoul, Stephen R.; Ronai, Belinda M.; Williams, Guy D.

2010-05-01

The fine-scale circulation around the Heard and McDonald Islands and through the Fawn Trough, Kerguelen Plateau, is described using data from three high-resolution CTD sections, Argo floats and satellite maps of chlorophyll a, sea surface temperature (SST) and absolute sea surface height (SSH). We confirm that the Polar Front (PF) is split into two branches over the Kerguelen Plateau, with the NPF crossing the north-eastern limits of our survey carrying 25 Sv to the southeast. The SPF was associated with a strong eastward-flowing jet carrying 12 Sv of baroclinic transport through the deepest part of Fawn Trough (relative to the bottom). As the section was terminated midway through the trough this estimate is very likely to be a lower bound for the total transport. We demonstrate that the SPF contributes to the Fawn Trough Current identified by previous studies. After exiting the Fawn Trough, the SPF crossed Chun Spur and continued as a strong north-westward flowing jet along the eastern flank of the Kerguelen Plateau before turning offshore between 50°S and 51.5°S. Measured bottom water temperatures suggest a deep water connection between the northern and southern parts of the eastern Kerguelen Plateau indicating that the deep western boundary current continues at least as far north as 50.5°S. Analysis of satellite altimetry derived SSH streamlines demonstrates a southward shift of both the northern and southern branches of the Polar Front from 1994 to 2004. In the direct vicinity of the Heard and McDonald islands, cool waters of southern origin flow along the Heard Island slope and through the Eastern Trough bringing cold Winter Water (WW) onto the plateau. Complex topography funnels flow through canyons, deepens the mixed layer and increases productivity, resulting in this area being the preferred foraging region for a number of satellite-tracked land-based predators.

Partly standing internal tides in a dendritic submarine canyon observed by an ocean glider

NASA Astrophysics Data System (ADS)

Hall, Rob A.; Aslam, Tahmeena; Huvenne, Veerle A. I.

2017-08-01

An autonomous ocean glider is used to make the first direct measurements of internal tides within Whittard Canyon, a large, dendritic submarine canyon system that incises the Celtic Sea continental slope and a site of high benthic biodiversity. This is the first time a glider has been used for targeted observations of internal tides in a submarine canyon. Vertical isopycnal displacement observations at different stations fit a one-dimensional model of partly standing semidiurnal internal tides - comprised of a major, incident wave propagating up the canyon limbs and a minor wave reflected back down-canyon by steep, supercritical bathymetry near the canyon heads. The up-canyon internal tide energy flux in the primary study limb decreases from 9.2 to 2.0 kW m-1 over 28 km (a dissipation rate of 1 - 2.5 ×10-7 Wkg-1), comparable to elevated energy fluxes and internal tide driven mixing measured in other canyon systems. Within Whittard Canyon, enhanced mixing is inferred from collapsed temperature-salinity curves and weakened dissolved oxygen concentration gradients near the canyon heads. It has previously been hypothesised that internal tides impact benthic fauna through elevated near-bottom current velocities and particle resuspension. In support of this, we infer order 20 cm s-1 near-bottom current velocities in the canyon and observe high concentrations of suspended particulate matter. The glider observations are also used to estimate a 1 °C temperature range and 12 μmol kg-1 dissolved oxygen concentration range, experienced twice a day by organisms on the canyon walls, due to the presence of internal tides. This study highlights how a well-designed glider mission, incorporating a series of tide-resolving stations at key locations, can be used to understand internal tide dynamics in a region of complex topography, a sampling strategy that is applicable to continental shelves and slopes worldwide.

Influence of the surface drag coefficient (young waves) on the current structure of the Berre lagoon

NASA Astrophysics Data System (ADS)

Alekseenko, Elena; Roux, Bernard; Kharif, Christian; Sukhinov, Alexander; Kotarba, Richard; Fougere, Dominique; Chen, Paul Gang

2013-04-01

Due to the shallowness, currents and hydrodynamics of Berre lagoon (South of France) are closely conditioned by the bottom topography, and wind affects the entire water column, as for many other Mediterranean lagoons (Perez-Ruzafa, 2011). Wind stress, which is caused by moving atmospheric disturbance, is known to have a major influence in lagoon water circulation. According to the numerical simulation for the main directions of the wind: N-NW, S-SE and W (wind speed of 80 km/h) it is observed that the current is maximal alongshore in the wind direction; the bottom nearshore current being larger in shallower area. This fact is coherent with fundamental principle of wind-driven flows in closed or partially closed basins which states that in shallow water the dominant force balance is between surface wind stress and bottom friction, yielding a current in the direction of the wind (Mathieu et al, 2002, Hunter and Hearn, 1987; Hearn and Hunter,1990). A uniform wind stress applied at the surface of a basin of variable depth sets up a circulation pattern characterized by relatively strong barotropic coastal currents in the direction of the wind, with return flow occurring over the deeper regions (Csanady, 1967; Csanady, 1971). One of the key parameters characterizing the wind stress formulation is a surface drag coefficient (Cds). Thus, an effect of a surface drag coefficient, in the range 0.0016 - 0.0032, will be analyzed in this work. The value of surface drag coefficient Cds = 0.0016 used in our previous studies (Alekseenko et al., 2012), would correspond to mature waves (open sea). But, in the case of semi-closed lagoonal ecosystem, it would be more appropriate to consider "young waves" mechanism. A dependency of this coefficient in terms of the wind speed is given by Young (1999) in both cases of mature waves and young waves. For "young waves" generated at a wind speed of 80 km/h, Cds = 0.0032. So, the influence of Cds on the vertical profile of the velocity in the water column is analyzed in the range 0.0016 - 0.0032. For the three main wind directions considered in this work, for a wind speed of 80 km/h, the complex current structure of the Berre lagoon is analysed. In the nearshore zones, strong alongshore downwind currents are generated, reaching values of the order of 1m/s (up to 1.5 m/s) at the free surface, and 0.5 - 0.6 m/s at the bottom. References Alekseenko E., B. Roux, A. Sukhinov, R. Kotarba, D. Fougere. Coastal hydrodynamics in a windy lagoon; submitted to Computers and Fluids, oct. 2012 Csanady G. T.: Large-scale motion in the Great Lakes, Journal of Geophysical Research, 72(16), 4151-4161, 1967. Csanady G. T. : Baroclinic boundary currents and long edge-waves in basins with sloping shores. J. Physical Oceanography 1(2):92-104, 1971. Hunter, J.R. and Hearn, C.J.: Lateral and vertical variations in the wind-driven circulations in long, shallow lakes, Journal of Geophysical Research, 92 (C12), 1987. Hearn, C.J. and Hunter, J.R.: A note on the equivalence of some two- and three-dimensional models of wind-driven barotropic flow in shallow seas, Applied Mathematical Modelling, 14, 553-556, 1990. Mathieu P.P., Deleersnijder E., Cushman-Roisin B., Beckers J.M. and Bolding K.: The role of topography in small well-mixed bays, with application to the lagoon of Mururoa. Continental Shelf research, 22(9), 1379-1395, 2002. A. Pérez-Ruzafa, C. Marcos, I.M. Pérez-Ruzafa (2011). Mediterranean coastal lagoons in an ecosystem and aquatic resources management context//Physics and Chemistry of the Earth, Parts A/B/C, Volume 36, Issues 5-6, 2011, Pages 160-166 Young I.R., Wind generated ocean waves. Ocean Engineering Series Editors. Elsevier, 1999, ISBN: 0-08-043317-0.

What is the Problem? Where is the Work? Getting to the Bottom of Social Action

DTIC Science & Technology

2010-10-20

MSA MORS SSUCO 10-10 “What is the problem? Where is the work? Getting to the bottom of social action” Mark Addleson School of Public Policy, George...Mason University Military Operations Research Society Symposium Social Sciences Underpinnings of Complex Operations October 20, 2010 Report...REPORT TYPE 3. DATES COVERED 00-00-2010 to 00-00-2010 4. TITLE AND SUBTITLE ’What is the problem? Where is the work? Getting to the bottom of social

Time-dependent onshore tsunami response

USGS Publications Warehouse

Apotsos, Alex; Gelfenbaum, Guy R.; Jaffe, Bruce E.

2012-01-01

While bulk measures of the onshore impact of a tsunami, including the maximum run-up elevation and inundation distance, are important for hazard planning, the temporal evolution of the onshore flow dynamics likely controls the extent of the onshore destruction and the erosion and deposition of sediment that occurs. However, the time-varying dynamics of actual tsunamis are even more difficult to measure in situ than the bulk parameters. Here, a numerical model based on the non-linear shallow water equations is used to examine the effects variations in the wave characteristics, bed slope, and bottom roughness have on the temporal evolution of the onshore flow. Model results indicate that the onshore flow dynamics vary significantly over the parameter space examined. For example, the flow dynamics over steep, smooth morphologies tend to be temporally symmetric, with similar magnitude velocities generated during the run-up and run-down phases of inundation. Conversely, on shallow, rough onshore topographies the flow dynamics tend to be temporally skewed toward the run-down phase of inundation, with the magnitude of the flow velocities during run-up and run-down being significantly different. Furthermore, for near-breaking tsunami waves inundating over steep topography, the flow velocity tends to accelerate almost instantaneously to a maximum and then decrease monotonically. Conversely, when very long waves inundate over shallow topography, the flow accelerates more slowly and can remain steady for a period of time before beginning to decelerate. These results indicate that a single set of assumptions concerning the onshore flow dynamics cannot be applied to all tsunamis, and site specific analyses may be required.

Far-field tsunami magnitude determined from ocean-bottom pressure gauge data around Japan

NASA Astrophysics Data System (ADS)

Baba, T.; Hirata, K.; Kaneda, Y.

2003-12-01

\\hspace*{3mm}Tsunami magnitude is the most fundamental parameter to scale tsunamigenic earthquakes. According to Abe (1979), the tsunami magnitude, Mt, is empirically related to the crest to trough amplitude, H, of the far-field tsunami wave in meters (Mt = logH + 9.1). Here we investigate the far-field tsunami magnitude using ocean-bottom pressure gauge data. The recent ocean-bottom pressure measurements provide more precise tsunami data with a high signal-to-noise ratio. \\hspace*{3mm}Japan Marine Science and Technology Center is monitoring ocean bottom pressure fluctuations using two submarine cables of depths of 1500 - 2400 m. These geophysical observatory systems are located off Cape Muroto, Southwest Japan, and off Hokkaido, Northern Japan. The ocean-bottom pressure data recorded with the Muroto and Hokkaido systems have been collected continuously since March, 1997 and October, 1999, respectively. \\hspace*{3mm}Over the period from March 1997 to June 2003, we have observed four far-field tsunami signals, generated by earthquakes, on ocean-bottom pressure records. These far-field tsunamis were generated by the 1998 Papua New Guinea eq. (Mw 7.0), 1999 Vanuatu eq. (Mw 7.2), 2001 Peru eq. (Mw 8.4) and 2002 Papua New Guinea eq. (Mw 7.6). Maximum amplitude of about 30 mm was recorded by the tsunami from the 2001 Peru earthquake. \\hspace*{3mm}Direct application of the Abe's empirical relation to ocean-bottom pressure gauge data underestimates tsunami magnitudes by about an order of magnitude. This is because the Abe's empirical relation was derived only from tsunami amplitudes with coastal tide gauges where tsunami is amplified by the shoaling of topography and the reflection at the coastline. However, these effects do not work for offshore tsunami in deep oceans. In general, amplification due to shoaling near the coastline is governed by the Green's Law, in which the tsunami amplitude is proportional to h-1/4, where h is the water depth. Wave amplitude also is doubled by reflection at the fixed edge (coastline). Hence, we introduce a water-depth term and a reflection coefficient of 2 in the original Abe_fs empirical relation to correct tsunami amplitude for open oceans and obtain Mt = log(2H/h-1/4) + 9.1, where h is the depth of the ocean bottom pressure gage. The modified empirical relation produces tsunami magnitudes close to those determined using tide gauges.

First description of a Lophelia pertusa reef complex in Atlantic Canada

NASA Astrophysics Data System (ADS)

Buhl-Mortensen, Pål; Gordon, Don C.; Buhl-Mortensen, Lene; Kulka, Dave W.

2017-08-01

For the first time, we describe a cold-water coral reef complex in Atlantic Canada, discovered at the shelf break, in the mouth of the Laurentian Channel. The study is based on underwater video and sidescan sonar. The reef complex covered an area of approximately 490×1300 m, at 280-400 m depth. It consisted of several small mounds (< 3 m high) where the scleractinian Lophelia pertusa occurred as live colonies, dead blocks and skeletal rubble. On the mounds, a total of 67 live colonies occurred within 14 patches at 300-320 m depth. Most of these (67%) were small (< 20 cm high). Dead coral (rubble and blocks), dominated (88% of all coral observations). Extensive signs of damage by bottom-fishing gear were observed: broken and tilted coral colonies, over-turned boulders and lost fishing gear. Fisheries observer data indicated that the reef complex was subjected to heavy otter trawling annually between 1980 and 2000. In June 2004, a 15 km2 conservation area excluding all bottom-fishing was established. Current bottom fisheries outside the closure include otter trawling for redfish and anchored longlines for halibut. Vessel monitoring system data indicate that the closure is generally respected by the fishing industry.

Capturing and modelling high-complex alluvial topography with UAS-borne laser scanning

NASA Astrophysics Data System (ADS)

Mandlburger, Gottfried; Wieser, Martin; Pfennigbauer, Martin

2015-04-01

Due to fluvial activity alluvial forests are zones of highest complexity and relief energy. Alluvial forests are dominated by new and pristine channels in consequence of current and historic flood events. Apart from topographic features, the vegetation structure is typically very complex featuring, both, dense under story as well as high trees. Furthermore, deadwood and debris carried from upstream during periods of high discharge within the river channel are deposited in these areas. Therefore, precise modelling of the micro relief of alluvial forests using standard tools like Airborne Laser Scanning (ALS) is hardly feasible. Terrestrial Laser Scanning (TLS), in turn, is very time consuming for capturing larger areas as many scan positions are necessary for obtaining complete coverage due to view occlusions in the forest. In the recent past, the technological development of Unmanned Arial Systems (UAS) has reached a level that light-weight survey-grade laser scanners can be operated from these platforms. For capturing alluvial topography this could bridge the gap between ALS and TLS in terms of providing a very detailed description of the topography and the vegetation structure due to the achievable very high point density of >100 points per m2. In our contribution we demonstrate the feasibility to apply UAS-borne laser scanning for capturing and modelling the complex topography of the study area Neubacher Au, an alluvial forest at the pre-alpine River Pielach (Lower Austria). The area was captured with Riegl's VUX-1 compact time-of-flight laser scanner mounted on a RiCopter (X-8 array octocopter). The scanner features an effective scan rate of 500 kHz and was flown in 50-100 m above ground. At this flying height the laser footprint is 25-50 mm allowing mapping of very small surface details. Furthermore, online waveform processing of the backscattered laser energy enables the retrieval of multiple targets for single laser shots resulting in a dense point cloud of, both, the ground surface and the alluvial vegetation. From the acquired point cloud the following products could be derived: (i) a very high resolution Digital Terrain Model (10 cm raster), (ii) a high resolution model of the water surface of the River Pielach (especially useful for validation of topo-bathymetry LiDAR data) and (iii) a detailed description of the complex vegetation structure.

An ocean circulation model in σS- z- σB hybrid coordinate and its validation

NASA Astrophysics Data System (ADS)

Zhuang, Zhanpeng; Yuan, Yeli; Yang, Guangbing

2018-02-01

A 3D, two-time-level, σS- z- σB hybrid-coordinate Marine Science and Numerical Modeling numerical ocean circulation model (HyMOM) is developed in this paper. In HyMOM, the σ coordinate is employed in the surface and bottom regions, and the z coordinate is used in the intermediate layers. This method can overcome problems with vanishing surface cells and minimize the unwanted deviation in representing bottom topography. The connection between the σ and z layers vertically includes an expanded "ghost" method and the linear interpolation. The governing equations in the σS- z- σB hybrid coordinate based on the complete Reynolds-averaged Navier-Stokes equations are derived in detail. The two-level time staggered and Eulerian forward and backward schemes, which are of second-order of accuracy, are adopted for the temporal difference in internal and external mode, respectively. The computation of the baroclinic gradient force is tested in an analytic test problem; the errors for two methods in HyMOM, which are relatively large only in the bottom layers, are obviously smaller than those in the pure σ and z models in almost all of the vertical layers. A quasi-global climatologic numerical experiment is constructed to test the simulation performance of HyMOM. With the monthly mean Levitus climatology data as reference, the HyMOM can improve the simulating accuracy compared with its pure z or σ coordinate implementation.

Examining Daily Electronic Cigarette Puff Topography Among Established and Non-established Cigarette Smokers in their Natural Environment.

PubMed

Lee, Youn Ok; Nonnemaker, James M; Bradfield, Brian; Hensel, Edward C; Robinson, Risa J

2017-10-04

Understanding exposures and potential health effects of ecigarettes is complex. Users' puffing behavior, or topography, affects function of ecigarette devices (e.g., coil temperature) and composition of their emissions. Users with different topographies are likely exposed to different amounts of any harmful or potentially harmful constituents (HPHCs). In this study, we compare ecigarette topographies of established cigarette smokers and non-established cigarette smokers. Data measuring e-cigarette topography were collected using a wireless hand-held monitoring device in users' everyday lives over 1 week. Young adult (aged 18-25) participants (N=20) used disposable e-cigarettes with the monitor as they normally would and responded to online surveys. Topography characteristics of established versus non-established cigarette smokers were compared. On average, established cigarette smokers in the sample had larger first puff volume (130.9ml vs. 56.0ml, p<.05) and larger puff volume per session (1,509.3ml vs. 651.7ml, p<.05) compared with non-established smokers. At marginal significance, they had longer sessions (566.3s vs. 279.7s, p=.06) and used e-cigarettes more sessions per day (5.3s vs. 3.5s, p=.14). Established cigarette smokers also used ecigarettes for longer puff durations (3.3s vs. 1.8s, p<.01) and had larger puff volume (110.3ml vs. 54.7ml, p<.05) compared with non-established smokers. At marginal significance, they had longer puff interval (38.1s vs. 21.7s, p=.05). Our results demonstrate that topography characteristics differ by level of current cigarette smoking. This suggests that exposures to constituents of e-cigarettes depends on user characteristics and that specific topography parameters may be needed for different user populations when assessing ecigarette health effects. A user's topography affects his or her exposure to HPHCs. As this study demonstrates, user characteristics, such as level of smoking, can influence topography. Thus, it is crucial to understand the topography profiles of different user types to assess the potential for population harm and to identify potentially vulnerable populations. This study only looked at topography of cigarette smokers using disposable e-cigarettes. Further research is needed to better understand potential variation in ecigarette topography and resulting exposures to HPHCs among users of different e-cigarette devices and liquids. © The Author 2017. Published by Oxford University Press on behalf of the Society for Research on Nicotine and Tobacco. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Geology and evolution of lakes in north-central Florida

USGS Publications Warehouse

Kindinger, J.L.; Davis, J.B.; Flocks, J.G.

1999-01-01

Fluid exchange between surficial waters and groundwater in karst environments, and the processes that control exchange, are of critical concern to water management districts and planners. High-resolution seismic data were collected from 30 lakes of north-central Florida. In each case study, lake structure and geomorphology were controlled by solution and/or mechanical processes. Processes that control lake development are twofold: (1) karstification or dissolution of the underlying limestone, and (2) the collapse, subsidence, or slumping of overburden to form sinkholes. Initial lake formation is directly related to the karst topography of the underlying host limestone. Case studies have shown that lakes can be divided by geomorphic types into progressive developmental phases: (1) active subsidence or collapse phase (young); (2) transitional phase (middle age); (3) baselevel phase (mature); and (4) polje (drowned prairie) - broad flat-bottom that have one or all phases of sinkhole. Using these criteria, Florida lakes can be classified by size, fill, subsurface features, and geomorphology.Fluid exchange between surficial waters and groundwater in karst environments, and the processes that control exchange, are of critical concern to water management districts and planners. High-resolution seismic data were collected from 30 lakes of north-central Florida. In each case study, lake structure and geomorphology were controlled by solution and/or mechanical processes. Processes that control lake development are twofold: (1) karstification or dissolution of the underlying limestone, and (2) the collapse, subsidence, or slumping of overburden to form sinkholes. Initial lake formation is directly related to the karst topography of the underlying host limestone. Case studies have shown that lakes can be divided by geomorphic types into progressive developmental phased: (1) active subsidence or collapse phase (young); (2) transitional phase (middle age); (3) baselevel phase (mature); and (4) polje (drowned prairie) - broad flat-bottom that have one or all phases of sinkhole. Using these criteria, Florida lakes can be classified by size, fill, subsurface features, and geomorphology.

Visualizing land-use and management complexity within biogeochemical cycles of an agricultural landscape

Treesearch

Kai Nils Nitzsche; Gernot Verch; Katrin Premke; Arthur Gessler; Zachary Kayler

2016-01-01

Crop fields are cultivated across continuities of soil, topography, and local climate that drive biological processes and nutrient cycling at the landscape scale; yet land management and agricultural research are often performed at the field scale, potentially neglecting the context of the surrounding landscape. Adding to this complexity is the overlap of ecosystems...

Determining change of bathymetry with GPR method in Ordu-Giresun, a sea-filled airport in the Black Sea, Turkey

NASA Astrophysics Data System (ADS)

Kadioglu, Selma; Kagan Kadioglu, Yusuf

2016-04-01

Ordu-Giresun (OGU) is a newly-constructed airport, the first sea-filled airport in Turkey and in Europe, and the second airport in the world after Osaca-Japan. The airport is between Gulyalı district in Ordu city and Piraziz district in Giresun city in Black Sea -Turkey. A protection breakwater has been constructed by filling a rock approximately 7.435-m long and with an average height of 5.5 m. Then, the Black Sea has been filled until 1 m over the sea level, approximately the area is 1.770.000 m2 wide and includes a runway, aprons and taxiway covered by breakwater. The runway has a 1-m thickness, 3-km length and 45-m width, PCN84 strength, and stone mastic asphalt surface. The aprons has a 240 x 110 m length and PCN110 strength, the taxiway is 250 x 24 m wide. The airport was started to be constructed in July 2011 and it began to serve on 22th May 2015. The aim of this study was to determine the depth of the rock-filled layer and the amount of sinking of the bathymetry which has been determined before filling processing. In addition, before bathymetry determination, unconsolidated sediments had been removed from the bottom of the sea. There were four drilling points to control the sinking of the bathymetry. Therefore, six suitable Ground Penetrating Radar (GPR) profiles were measured, crossing these points with runway and aprons, using 250-MHz and 100-MHz shielded antennas. Starting points of the profiles were in the middle of the runway to merge between depth and thickness changing of the filled layer and bathymetry along the profiles. Surface topography changing was measured spaced 1 m apart with 1 cm sensitivity on each profile. At the same time, similarly the topography changing, bathymetry coordinates was re-arranged along the each profile. Topography corrections were applied to the processed radargrams and then the bottom boundary lines of the rock-filled layer were determined. The maximum height was 3.5 m according to the sea level, which was on the middle point of the runway, representing zero depth of the radargrams of the profiles. To determine the amount of the sinking of the rock filled layer, the first sea level were lined at 3.5 m in depth on the right side depth axes of the radargrams. The second, bathymetry changing lines were placed on the interested radargrams. Finally, differences between the bottom boundary lines of the filled layer and bathymetry lines were compared. The results showed that GPR method could be applied successfully to determine the depth of the rock filled layer in Black Sea and the small amount of the sinking of the bathymetry. Acknowledgement This project has been supported by Cengiz - Içtaş Joint Venture-Turkey. This study is a contribution to the EU funded COST action TU1208 "Civil Engineering Applications of Ground Penetrating Radar" (www.GPRadar.eu, www.cost.eu).

On Reinventing Education in the Age of Complexity: A Vygotsky-­Inspired Generative Complexity Approach

ERIC Educational Resources Information Center

Jörg, Ton

2017-01-01

Reinventing education is the ultimate aim of this contribution. The approach taken is a radical new complexity-inspired bottom-up approach which shows complexity as the fount of creativity and innovation. Organizing complexity accordingly may be the foundation for a new complexified vision of education. It all starts with new thinking in…

Strategies for Selecting Routes through Real-World Environments: Relative Topography, Initial Route Straightness, and Cardinal Direction

PubMed Central

Brunyé, Tad T.; Collier, Zachary A.; Cantelon, Julie; Holmes, Amanda; Wood, Matthew D.; Linkov, Igor; Taylor, Holly A.

2015-01-01

Previous research has demonstrated that route planners use several reliable strategies for selecting between alternate routes. Strategies include selecting straight rather than winding routes leaving an origin, selecting generally south- rather than north-going routes, and selecting routes that avoid traversal of complex topography. The contribution of this paper is characterizing the relative influence and potential interactions of these strategies. We also examine whether individual differences would predict any strategy reliance. Results showed evidence for independent and additive influences of all three strategies, with a strong influence of topography and initial segment straightness, and relatively weak influence of cardinal direction. Additively, routes were also disproportionately selected when they traversed relatively flat regions, had relatively straight initial segments, and went generally south rather than north. Two individual differences, extraversion and sense of direction, predicted the extent of some effects. Under real-world conditions navigators indeed consider a route’s initial straightness, cardinal direction, and topography, but these cues differ in relative influence and vary in their application across individuals. PMID:25992685

Alpine Ecohydrology Across Scales: Propagating Fine-scale Heterogeneity to the Catchment and Beyond

NASA Astrophysics Data System (ADS)

Mastrotheodoros, T.; Pappas, C.; Molnar, P.; Burlando, P.; Hadjidoukas, P.; Fatichi, S.

2017-12-01

In mountainous ecosystems, complex topography and landscape heterogeneity govern ecohydrological states and fluxes. Here, we investigate topographic controls on water, energy and carbon fluxes across different climatic regimes and vegetation types representative of the European Alps. We use an ecohydrological model to perform fine-scale numerical experiments on a synthetic domain that comprises a symmetric mountain with eight catchments draining along the cardinal and intercardinal directions. Distributed meteorological model input variables are generated using observations from Switzerland. The model computes the incoming solar radiation based on the local topography. We implement a multivariate statistical framework to disentangle the impact of landscape heterogeneity (i.e., elevation, aspect, flow contributing area, vegetation type) on the simulated water, carbon, and energy dynamics. This allows us to identify the sensitivities of several ecohydrological variables (including leaf area index, evapotranspiration, snow-cover and net primary productivity) to topographic and meteorological inputs at different spatial and temporal scales. We also use an alpine catchment as a real case study to investigate how the natural variability of soil and land cover affects the idealized relationships that arise from the synthetic domain. In accordance with previous studies, our analysis shows a complex pattern of vegetation response to radiation. We find also different patterns of ecosystem sensitivity to topography-driven heterogeneity depending on the hydrological regime (i.e., wet vs. dry conditions). Our results suggest that topography-driven variability in ecohydrological variables (e.g. transpiration) at the fine spatial scale can exceed 50%, but it is substantially reduced ( 5%) when integrated at the catchment scale.

Oceanic residual depth measurements, the plate cooling model, and global dynamic topography

NASA Astrophysics Data System (ADS)

Hoggard, Mark J.; Winterbourne, Jeff; Czarnota, Karol; White, Nicky

2017-03-01

Convective circulation of the mantle causes deflections of the Earth's surface that vary as a function of space and time. Accurate measurements of this dynamic topography are complicated by the need to isolate and remove other sources of elevation, arising from flexure and lithospheric isostasy. The complex architecture of continental lithosphere means that measurement of present-day dynamic topography is more straightforward in the oceanic realm. Here we present an updated methodology for calculating oceanic residual bathymetry, which is a proxy for dynamic topography. Corrections are applied that account for the effects of sedimentary loading and compaction, for anomalous crustal thickness variations, for subsidence of oceanic lithosphere as a function of age and for non-hydrostatic geoid height variations. Errors are formally propagated to estimate measurement uncertainties. We apply this methodology to a global database of 1936 seismic surveys located on oceanic crust and generate 2297 spot measurements of residual topography, including 1161 with crustal corrections. The resultant anomalies have amplitudes of ±1 km and wavelengths of ˜1000 km. Spectral analysis of our database using cross-validation demonstrates that spherical harmonics up to and including degree 30 (i.e., wavelengths down to 1300 km) are required to accurately represent these observations. Truncation of the expansion at a lower maximum degree erroneously increases the amplitude of inferred long-wavelength dynamic topography. There is a strong correlation between our observations and free-air gravity anomalies, magmatism, ridge seismicity, vertical motions of adjacent rifted margins, and global tomographic models. We infer that shorter wavelength components of the observed pattern of dynamic topography may be attributable to the presence of thermal anomalies within the shallow asthenospheric mantle.

Thinking about the Weather: How Display Salience and Knowledge Affect Performance in a Graphic Inference Task

ERIC Educational Resources Information Center

Hegarty, Mary; Canham, Matt S.; Fabrikant, Sara I.

2010-01-01

Three experiments examined how bottom-up and top-down processes interact when people view and make inferences from complex visual displays (weather maps). Bottom-up effects of display design were investigated by manipulating the relative visual salience of task-relevant and task-irrelevant information across different maps. Top-down effects of…

Ocean surface waves in Hurricane Ike (2008) and Superstorm Sandy (2012): Coupled model predictions and observations

NASA Astrophysics Data System (ADS)

Chen, Shuyi S.; Curcic, Milan

2016-07-01

Forecasting hurricane impacts of extreme winds and flooding requires accurate prediction of hurricane structure and storm-induced ocean surface waves days in advance. The waves are complex, especially near landfall when the hurricane winds and water depth varies significantly and the surface waves refract, shoal and dissipate. In this study, we examine the spatial structure, magnitude, and directional spectrum of hurricane-induced ocean waves using a high resolution, fully coupled atmosphere-wave-ocean model and observations. The coupled model predictions of ocean surface waves in Hurricane Ike (2008) over the Gulf of Mexico and Superstorm Sandy (2012) in the northeastern Atlantic and coastal region are evaluated with the NDBC buoy and satellite altimeter observations. Although there are characteristics that are general to ocean waves in both hurricanes as documented in previous studies, wave fields in Ike and Sandy possess unique properties due mostly to the distinct wind fields and coastal bathymetry in the two storms. Several processes are found to significantly modulate hurricane surface waves near landfall. First, the phase speed and group velocities decrease as the waves become shorter and steeper in shallow water, effectively increasing surface roughness and wind stress. Second, the bottom-induced refraction acts to turn the waves toward the coast, increasing the misalignment between the wind and waves. Third, as the hurricane translates over land, the left side of the storm center is characterized by offshore winds over very short fetch, which opposes incoming swell. Landfalling hurricanes produce broader wave spectra overall than that of the open ocean. The front-left quadrant is most complex, where the combination of windsea, swell propagating against the wind, increasing wind-wave stress, and interaction with the coastal topography requires a fully coupled model to meet these challenges in hurricane wave and surge prediction.

Scaled CMOS Reliability and Considerations for Spacecraft Systems : Bottom-Up and Top-Down Perspectives

NASA Technical Reports Server (NTRS)

White, Mark

2012-01-01

The recently launched Mars Science Laboratory (MSL) flagship mission, named Curiosity, is the most complex rover ever built by NASA and is scheduled to touch down on the red planet in August, 2012 in Gale Crater. The rover and its instruments will have to endure the harsh environments of the surface of Mars to fulfill its main science objectives. Such complex systems require reliable microelectronic components coupled with adequate component and system-level design margins. Reliability aspects of these elements of the spacecraft system are presented from bottom- up and top-down perspectives.

Transport driven by eddy momentum fluxes in the Gulf Stream Extension region

NASA Astrophysics Data System (ADS)

Greatbatch, R. J.; Zhai, X.; Claus, M.; Czeschel, L.; Rath, W.

2010-12-01

The importance of the Gulf Stream Extension region in climate and seasonal prediction research is being increasingly recognised. Here we use satellite-derived eddy momentum fluxes to drive a shallow water model for the North Atlantic Ocean that includes the realistic ocean bottom topography. The results show that the eddy momentum fluxes can drive significant transport, sufficient to explain the observed increase in transport of the Gulf Stream following its separation from the coast at Cape Hatteras, as well as the observed recirculation gyres. The model also captures recirculating gyres seen in the mean sea surface height field within the North Atlantic Current system east of the Grand Banks of Newfoundland, including a representation of the Mann Eddy.

Modelling non-hydrostatic processes in sill regions

NASA Astrophysics Data System (ADS)

Souza, A.; Xing, J.; Davies, A.; Berntsen, J.

2007-12-01

We use a non-hydrostatic model to compute tidally induced flow and mixing in the region of bottom topography representing the sill at the entrance to Loch Etive (Scotland). This site is chosen since detailed measurements were recently made there. With non-hydrostatic dynamics in the model our results showed that the model could reproduce the observed flow characteristics, e.g., hydraulic transition, flow separation and internal waves. However, when calculations were performed using the model in the hydrostatic form, significant artificial convective mixing occurred. This influenced the computed temperature and flow field. We will discuss in detail the effects of non-hydrostatic dynamics on flow over the sill, especially investigate non-linear and non-hydrostatic contributions to modelled internal waves and internal wave energy fluxes.

Positivity-preserving well-balanced discontinuous Galerkin methods for the shallow water flows in open channels

NASA Astrophysics Data System (ADS)

Qian, Shouguo; Li, Gang; Shao, Fengjing; Xing, Yulong

2018-05-01

We construct and study efficient high order discontinuous Galerkin methods for the shallow water flows in open channels with irregular geometry and a non-flat bottom topography in this paper. The proposed methods are well-balanced for the still water steady state solution, and can preserve the non-negativity of wet cross section numerically. The well-balanced property is obtained via a novel source term separation and discretization. A simple positivity-preserving limiter is employed to provide efficient and robust simulations near the wetting and drying fronts. Numerical examples are performed to verify the well-balanced property, the non-negativity of the wet cross section, and good performance for both continuous and discontinuous solutions.

The "shallow-waterness" of the wave climate in European coastal regions

NASA Astrophysics Data System (ADS)

Håkon Christensen, Kai; Carrasco, Ana; Bidlot, Jean-Raymond; Breivik, Øyvind

2017-07-01

In contrast to deep water waves, shallow water waves are influenced by bottom topography, which has consequences for the propagation of wave energy as well as for the energy and momentum exchange between the waves and the mean flow. The ERA-Interim reanalysis is used to assess the fraction of wave energy associated with shallow water waves in coastal regions in Europe. We show maps of the distribution of this fraction as well as time series statistics from eight selected stations. There is a strong seasonal dependence and high values are typically associated with winter storms, indicating that shallow water wave effects can occasionally be important even in the deeper parts of the shelf seas otherwise dominated by deep water waves.

Thermal Pollution Mathematical Model. Volume 6; Verification of Three-Dimensional Free-Surface Model at Anclote Anchorage; [environment impact of thermal discharges from power plants

NASA Technical Reports Server (NTRS)

Lee, S. S.; Sengupta, S.; Tuann, S. Y.; Lee, C. R.

1980-01-01

The free-surface model presented is for tidal estuaries and coastal regions where ambient tidal forces play an important role in the dispersal of heated water. The model is time dependent, three dimensional, and can handle irregular bottom topography. The vertical stretching coordinate is adopted for better treatment of kinematic condition at the water surface. The results include surface elevation, velocity, and temperature. The model was verified at the Anclote Anchorage site of Florida Power Company. Two data bases at four tidal stages for winter and summer conditions were used to verify the model. Differences between measured and predicted temperatures are on an average of less than 1 C.

Capturing the flow beneath water waves.

PubMed

Nachbin, A; Ribeiro-Junior, R

2018-01-28

Recently, the authors presented two numerical studies for capturing the flow structure beneath water waves (Nachbin and Ribeiro-Junior 2014 Disc. Cont. Dyn. Syst. A 34 , 3135-3153 (doi:10.3934/dcds.2014.34.3135); Ribeiro-Junior et al. 2017 J. Fluid Mech. 812 , 792-814 (doi:10.1017/jfm.2016.820)). Closed orbits for irrotational waves with an opposing current and stagnation points for rotational waves were some of the issues addressed. This paper summarizes the numerical strategies adopted for capturing the flow beneath irrotational and rotational water waves. It also presents new preliminary results for particle trajectories, due to irrotational waves, in the presence of a bottom topography.This article is part of the theme issue 'Nonlinear water waves'. © 2017 The Author(s).

Dynamic topography in subduction zones: insights from laboratory models

NASA Astrophysics Data System (ADS)

Bajolet, Flora; Faccenna, Claudio; Funiciello, Francesca

2014-05-01

The topography in subduction zones can exhibit very complex patterns due to the variety of forces operating this setting. If we can deduce the theoretical isostatic value from density structure of the lithosphere, the effect of flexural bending and the dynamic component of topography are difficult to quantify. In this work, we attempt to measure and analyze the topography of the overriding plate during subduction compared to a pure shortening setting. We use analog models where the lithospheres are modeled by thin-sheet layers of silicone putty lying on low-viscosity syrup (asthenosphere). The model is shorten by a piston pushing an oceanic plate while a continental plate including a weak zone to localize the deformation is fixed. In one type of experiments, the oceanic plate bends and subducts underneath the continental one; in a second type the two plates are in contact without any trench, and thus simply shorten. The topography evolution is monitored with a laser-scanner. In the shortening model, the elevation increases progressively, especially in the weak zone, and is consistent with expected isostatic values. In the subduction model, the topography is characterized, from the piston to the back-wall, by a low elevation of the dense oceanic plate, a flexural bulge, the trench forming a deep depression, the highly elevated weak zone, and the continental upper plate of intermediate elevation. The topography of the upper plate is consistent with isostatic values for very early stages, but exhibits lower elevations than expected for later stages. For a same amount of shortening of the continental plate, the thickening is the same and the plate should have the same elevation in both types of models. However, comparing the topography at 20, 29 and 39% of shortening, we found that the weak zone is 0.4 to 0.6 mm lower when there is an active subduction. Theses values correspond to 2.6 to 4 km in nature. Although theses values are high, there are of the same order as dynamic topography and could represent the dynamic effect of the slab sinking into the asthenosphere and lowering the elevation of the upper plate.

Ecohydrologic Dynamics in Areas of Complex Topography in Semiarid Ecosystems

NASA Astrophysics Data System (ADS)

Ivanov, V. Y.; Bras, R. L.; Vivoni, E. R.

2008-12-01

Topography strongly affects the state and distribution of vegetation and this control is normally considered to operate through the regulation of the incoming solar radiation and lateral redistribution of water and elements. One of the areas of active research is how plants adjust to terrain effects relative to their location in a landscape and what the implications are for the spatial distribution of the water balance. This study emphasizes the coupled nature of interactions among vegetation-water-energy dynamics and their corresponding controls in complex topography of a semiarid ecosystem. These dynamics are investigated by constructing a coupled modeling system, tRIBS+VEGGIE, based on physical, biochemical, or mechanistic representation of individual processes. In a set of numerical experiments, linkages between terrain attributes, patterns of grass and shrub productivity, and water balance components are examined. For different imposed regimes of lateral water transfer, regions of relative vegetation "favorability" are identified. Their principal controlling mechanisms, as mediated by topographic features of the landscape, are investigated. It is argued that the long-term effects of site-specific and non-local terrain characteristics are superimposed and the key features of the superposition appear to be of the same form, irrespective of the soil hydraulic type or the actual water transport mechanism involved.

Gently dipping normal faults identified with Space Shuttle radar topography data in central Sulawesi, Indonesia, and some implications for fault mechanics

USGS Publications Warehouse

Spencer, J.E.

2011-01-01

Space-shuttle radar topography data from central Sulawesi, Indonesia, reveal two corrugated, domal landforms, covering hundreds to thousands of square kilometers, that are bounded to the north by an abrupt transition to typical hilly to mountainous topography. These domal landforms are readily interpreted as metamorphic core complexes, an interpretation consistent with a single previous field study, and the abrupt northward transition in topographic style is interpreted as marking the trace of two extensional detachment faults that are active or were recently active. Fault dip, as determined by the slope of exhumed fault footwalls, ranges from 4?? to 18??. Application of critical-taper theory to fault dip and hanging-wall surface slope, and to similar data from several other active or recently active core complexes, suggests a theoretical limit of three degrees for detachment-fault dip. This result appears to conflict with the dearth of seismological evidence for slip on faults dipping less than ~. 30??. The convex-upward form of the gently dipping fault footwalls, however, allows for greater fault dip at depths of earthquake initiation and dominant energy release. Thus, there may be no conflict between seismological and mapping studies for this class of faults. ?? 2011 Elsevier B.V.

Complex, multi-scale small intestinal topography replicated in cellular growth substrates fabricated via chemical vapor deposition of Parylene C.

PubMed

Koppes, Abigail N; Kamath, Megha; Pfluger, Courtney A; Burkey, Daniel D; Dokmeci, Mehmet; Wang, Lin; Carrier, Rebecca L

2016-08-22

Native small intestine possesses distinct multi-scale structures (e.g., crypts, villi) not included in traditional 2D intestinal culture models for drug delivery and regenerative medicine. The known impact of structure on cell function motivates exploration of the influence of intestinal topography on the phenotype of cultured epithelial cells, but the irregular, macro- to submicron-scale features of native intestine are challenging to precisely replicate in cellular growth substrates. Herein, we utilized chemical vapor deposition of Parylene C on decellularized porcine small intestine to create polymeric intestinal replicas containing biomimetic irregular, multi-scale structures. These replicas were used as molds for polydimethylsiloxane (PDMS) growth substrates with macro to submicron intestinal topographical features. Resultant PDMS replicas exhibit multiscale resolution including macro- to micro-scale folds, crypt and villus structures, and submicron-scale features of the underlying basement membrane. After 10 d of human epithelial colorectal cell culture on PDMS substrates, the inclusion of biomimetic topographical features enhanced alkaline phosphatase expression 2.3-fold compared to flat controls, suggesting biomimetic topography is important in induced epithelial differentiation. This work presents a facile, inexpensive method for precisely replicating complex hierarchal features of native tissue, towards a new model for regenerative medicine and drug delivery for intestinal disorders and diseases.

Near-inertial motions over a mid-Ocean Ridge; Effects of topography and hydrothermal plumes

NASA Astrophysics Data System (ADS)

Thomson, Richard E.; Roth, Sharon E.; Dymond, Jack

1990-05-01

We investigate the spatial structure of near-inertial motions in the vicinity of the Endeavour segment of Juan de Fuca Ridge (approximately 48°N, 129°W) in the northeast Pacific Ocean. On the basis of time series current and water property data collected from September 1984 to September 1987, near-inertial motions are ubiquitous features of the 2200-m water column, with root-mean-square (rms) current speeds comparable to those of the dominant M2 tidal currents. Within the lower 1000 m of the water column where most of the observations were obtained, near-inertial oscillations have rms current speeds of O(1 cm/s) and vertical isotherm displacements of O(10 m). The fluctuations are confined to the frequency band 0.966-1.079 f(f is the local Coriolis parameter) and have characteristic event durations of 1 week. Although the spectra of subsurface motions are dominated by the "blue-shifted" superinertial band, significant spectral peaks are found also in the subinertial and inertial frequency bands. Marked alteration of the near-inertial current amplitudes occurs over two well-defined depth zones within the study region. Within the 200-m zone immediately above the 2100-m ridge crest, current amplitudes are amplified by a factor of 1.2-1.7 because of bottom reflection and/or scattering of the downward propagating energy. Evidence that the amplification may be linked to bottom reflection rather than to scattering is provided by flattening and cross-slope rotation of the near-inertial current ellipses with increased proximity to the top of the ridge. Reflection would occur at grazing angles of less than 1° and would be associated with surface-generated waves originating at distances of over 100 km from the observational site. In contrast to the enhanced amplitudes immediately above the top of the ridge, near-inertial currents within the 1600- to 1800-m depth range undergo pronounced attenuation and frequency alteration. Amplitude attenuation is especially pronounced for motions in the superinertial band and may arise through critical-layer absorption of downward propagating waves as they encounter increased vertical shear in the background flow. The increased shear is most likely associated with buoyancy-induced flow formed by the extensive hydrothermal plume emanating from vent sites in the axial valley along the ridge crest, but it could also be related to bottom-trapped oscillations over the steep ridge topography. Near-inertial motions are estimated to have vertical coherence scales of the order of 10-100 m, while horizontal coherence scales exceed the 50-km separation between the mooring locations. Minimum vertical and horizontal coherences are found for the depth zone 1600-1800 m, while maximum correlation occurs for near-bottom motions immediately above the crest of the ridge. Weak near-inertial motions are observed within the 100-m-deep axial valley.

Gravbox - The First Augmented Reality Sandbox for Gravitational Dynamics

NASA Astrophysics Data System (ADS)

Isbell, Jacob; Deam, Sophie; Reed, Mason; Bettis, Wyatt; Lu, Jianbo; Luppen, Zachary; Maier, Erin; McCurdy, Ross; Moore, Sadie; Fu, Hai

2018-01-01

Gravitational effects are an overarching theme in astronomy education, yet existing classroom demonstrations are insufficient in elucidating complex gravitational interactions. Inspired by the augmented reality (AR) sandbox developed by geologists, we have developed Gravbox, the first AR sandbox to demonstrate gravitational dynamics. The arbitrary topography of the sand surface represents the mass distribution of a two-dimensional universe. The computer reads the topography with a Kinect camera, calculates the orbit of a test particle with user-defined position and velocity, and projects the topography contour map and orbit animation with an overhead projector, all within a duty cycle of one second. This creates an interactive and intuitive tool to help students at all levels understand gravitational effects. In this contribution, we will describe the development of the Gravbox prototype and show its current capabilities. The Gravbox software will be publicly available along with a building tutorial.

Braking effect of climate and topography on global change-induced upslope forest expansion.

PubMed

Alatalo, Juha M; Ferrarini, Alessandro

2017-03-01

Forests are expected to expand into alpine areas due to global climate change. It has recently been shown that temperature alone cannot realistically explain this process and that upslope tree advance in a warmer scenario may depend on the availability of sites with adequate geomorphic/topographic characteristics. Here, we show that, besides topography (slope and aspect), climate itself can produce a braking effect on the upslope advance of subalpine forests and that tree limit is influenced by non-linear and non-monotonic contributions of the climate variables which act upon treeline upslope advance with varying relative strengths. Our results suggest that global climate change impact on the upslope advance of subalpine forests should be interpreted in a more complex way where climate can both speed up and slow down the process depending on complex patterns of contribution from each climate and non-climate variable.

Structural characteristics and tectonics of northeastern Tellus Regio and Meni Tessera

NASA Technical Reports Server (NTRS)

Toermaenen, T.

1992-01-01

The Tellus Regio-Meni Tessera region is an interesting highland area characterized by large areas of complex ridged terrain or tessera terrain. The area was previously studied from the Venera 15/16 data, typical characteristics of complex tessera terrain of Tellus Regio were analyzed, and a formation mechanism was proposed. Apparent depths of compensation of approximately 30-50 km were calculated from Pioneer Venus gravity and topography data. These values indicate predominant Airy compensation for the area. Regional stresses and lithospheric structures were defined from analysis of surface structures, topography, and gravity data. In this work we concentrate on northeastern Tellus Regio and Meni Tessera, which are situated north and west of Tellus Regio. Structural features and relationships are analyzed in order to interpret tectonic history of the area. Study area was divided into three subareas: northeastern Tellus Regio, Meni Tessera, and the deformed plain between them.

A coupled-mode model for the hydroelastic analysis of large floating bodies over variable bathymetry regions

NASA Astrophysics Data System (ADS)

Belibassakis, K. A.; Athanassoulis, G. A.

2005-05-01

The consistent coupled-mode theory (Athanassoulis & Belibassakis, J. Fluid Mech. vol. 389, 1999, p. 275) is extended and applied to the hydroelastic analysis of large floating bodies of shallow draught or ice sheets of small and uniform thickness, lying over variable bathymetry regions. A parallel-contour bathymetry is assumed, characterized by a continuous depth function of the form h( {x,y}) {=} h( x ), attaining constant, but possibly different, values in the semi-infinite regions x {<} a and x {>} b. We consider the scattering problem of harmonic, obliquely incident, surface waves, under the combined effects of variable bathymetry and a floating elastic plate, extending from x {=} a to x {=} b and {-} infty {<} y{<}infty . Under the assumption of small-amplitude incident waves and small plate deflections, the hydroelastic problem is formulated within the context of linearized water-wave and thin-elastic-plate theory. The problem is reformulated as a transition problem in a bounded domain, for which an equivalent, Luke-type (unconstrained), variational principle is given. In order to consistently treat the wave field beneath the elastic floating plate, down to the sloping bottom boundary, a complete, local, hydroelastic-mode series expansion of the wave field is used, enhanced by an appropriate sloping-bottom mode. The latter enables the consistent satisfaction of the Neumann bottom-boundary condition on a general topography. By introducing this expansion into the variational principle, an equivalent coupled-mode system of horizontal equations in the plate region (a {≤} x {≤} b) is derived. Boundary conditions are also provided by the variational principle, ensuring the complete matching of the wave field at the vertical interfaces (x{=}a and x{=}b), and the requirements that the edges of the plate are free of moment and shear force. Numerical results concerning floating structures lying over flat, shoaling and corrugated seabeds are presented and compared, and the effects of wave direction, bottom slope and bottom corrugations on the hydroelastic response are presented and discussed. The present method can be easily extended to the fully three-dimensional hydroelastic problem, including bodies or structures characterized by variable thickness (draught), flexural rigidity and mass distributions.

Ridge Flank Flux as a Potential Source for the North Pacific Silica Plume

NASA Astrophysics Data System (ADS)

Johnson, H. P.; Hautala, S. L.; Bjorklund, T. A.

2005-12-01

The North Pacific silica plume is a global scale anomaly, extending from the North American continental margin to west of the Hawaii-Emperor seamount chain. Inventory of the plume at depths between 2000 and 3000 meters indicates that it contains 164 Teramols of dissolved silica, and is maintained by a horizontal flux of approximately 1.5 Tmols/year from the Eastern Pacific. The source region of this silica plume has been previously reported to be Cascadia Basin in the NE Pacific. However, simple box models based both on new hydrostations and compilations of archive data indicate that only a third of the dissolved silica that enters the larger North Pacific plume originates locally within the Cascadia/Gorda Basin. As it encounters the North American continental margin, the eastward-flowing deep Pacific bottom water is forced into `a U-turn' by seafloor topography. A portion of the bottom water is elevated from 4000 to 2300 meter depths by the high geothermal heat flow during rapid passage through Cascadia/Gorda Basin, and subsequently flows westward as the North Pacific mid-water plume. The plume water also absorbs an estimated 0.47 Tmol/year of locally derived silica during its passage adjacent to the continental margin. However, the Pacific bottom water is already relatively enriched in dissolved silica when it passes the Gorda Ridge/Mendocino junction, and the remaining 1 Tmol/year of silica must be acquired during near-bottom transit from the Western Pacific, over the portion of the easternmost Pacific plate where basement is younger than 65 Ma. Global compilations based on heat flow data argue that the upper crustal section of the young, eastern Pacific plate is an enormous aquifer, with active hydrothermal circulation and presumably diffuse venting into the bottom water. The suggestion that the large-scale flux of silica-rich hydrothermal fluid from the young eastern portion of the Pacific plate contributes to the North Pacific silica plume is a consequence of that interpretation, but is only a plausible and still untested hypothesis. If correct, however, it implies that the ridge flanks of the eastern Pacific Ocean are a global-scale source of a critically important nutrient.

Evaluation of the influence of bottom roughness on parameters of wave flows in channels

NASA Astrophysics Data System (ADS)

Valov, A. O.; Degtyarev, V. V.; Fedorova, N. N.

2018-03-01

In this paper, a comparative analysis of the results of numerical and experimental studies of the parameters of displacement waves in trays of a rectangular cross-sectional shape with different bottom roughness is performed with the "instantaneous" elimination of the obstacle creating the initial level difference. The program ANSYS complex is used in work.

Landslide

NASA Image and Video Library

2014-08-26

This image from NASA 2001 Mars Odyssey spacecraft shows a landslide deposit within a complex crater note the ejecta to the top and bottom of the image. There is a smaller complex crater on the ejecta to the north of the larger crater.

Overview of the Impact Region

NASA Image and Video Library

2015-04-29

On April 30th, this region of Mercury's surface will have a new crater! Traveling at 3.91 kilometers per second (over 8,700 miles per hour), the MESSENGER spacecraft will collide with Mercury's surface, creating a crater estimated to be 16 meters (52 feet) in diameter. The large, 400-kilometer-diameter (250-mile-diameter), impact basin Shakespeare occupies the bottom left quarter of this image. Shakespeare is filled with smooth plains material, likely due to extensive lava flooding the basin in the past. As of 24 hours before the impact, the current best estimates predict that the spacecraft will strike a ridge slightly to the northeast of Shakespeare. View this image to see more details of the predicted impact site and time. Instrument: Mercury Dual Imaging System (MDIS) and Mercury Laser Altimeter (MLA) Latitude Range: 49°-59° N Longitude Range: 204°-217° E Topography: Exaggerated by a factor of 5.5. Colors: Coded by topography. The tallest regions are colored red and are roughly 3 kilometers (1.9 miles) higher than low-lying areas such as the floors of impact craters, colored blue. Scale: The large crater on the left side of the image is Janacek, with a diameter of 48 kilometers (30 miles) http://photojournal.jpl.nasa.gov/catalog/PIA19444

Isopycnal deepening of an under-ice river plume in coastal waters: Field observations and modeling

NASA Astrophysics Data System (ADS)

Li, S. Samuel; Ingram, R. Grant

2007-07-01

The Great Whale River, located on the southeast coast of Hudson Bay in Canada, forms a large river plume under complete landfast ice during early spring. Short-term fluctuations of plume depth have motivated the present numerical study of an under-ice river plume subject to tidal motion and friction. We introduce a simple two-layer model for predicting the vertical penetration of the under-ice river plume as it propagates over a deepening topography. The topography is idealized but representative. Friction on the bottom surface of the ice cover, on the seabed, and at the plume interface is parameterized using the quadratic friction law. The extent of the vertical penetration is controlled by dimensionless parameters related to tidal motion and river outflow. Model predictions are shown to compare favorably with under-ice plume measurements from the river mouth. This study illustrates that isopycnal deepening occurs when the ice-cover vertical motion creates a reduced flow cross-section during the ebbing tide. This results in supercritical flow and triggers the downward plume penetration in the offshore. For a given river discharge, the freshwater source over a tidal cycle is unsteady in terms of discharge velocity because of the variation in the effective cross-sectional area at the river mouth, through which freshwater flows.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pelletier, Jon D.; Broxton, Patrick D.; Hazenberg, Pieter

Earth’s terrestrial near-subsurface environment can be divided into relatively porous layers of soil, intact regolith, and sedimentary deposits above unweathered bedrock. Variations in the thicknesses of these layers control the hydrologic and biogeochemical responses of landscapes. Currently, Earth System Models approximate the thickness of these relatively permeable layers above bedrock as uniform globally, despite the fact that their thicknesses vary systematically with topography, climate, and geology. To meet the need for more realistic input data for models, we developed a high-resolution gridded global data set of the average thicknesses of soil, intact regolith, and sedimentary deposits within each 30 arcsecmore » (~ 1 km) pixel using the best available data for topography, climate, and geology as input. Our data set partitions the global land surface into upland hillslope, upland valley bottom, and lowland landscape components and uses models optimized for each landform type to estimate the thicknesses of each subsurface layer. On hillslopes, the data set is calibrated and validated using independent data sets of measured soil thicknesses from the U.S. and Europe and on lowlands using depth to bedrock observations from groundwater wells in the U.S. As a result, we anticipate that the data set will prove useful as an input to regional and global hydrological and ecosystems models.« less

Different responses of chlorophyll-a concentration and Sea Surface Temperature (SST) on southeasterly wind blowing in the Sunda Strait

NASA Astrophysics Data System (ADS)

Wirasatriya, A.; Kunarso; Maslukah, L.; Satriadi, A.; Armanto, R. D.

2018-03-01

During southeast monsoon, along the western coast of Sumatra Island and southern coast of Java Island are known as the coastal upwelling areas denoted by the occurrence of Sea Surface Temperature (SST) cooling and chlorophyll-a blooming. Located between Sumatra and Java Islands, Sunda Strait waters may give different response to the southeasterly wind blowing above. Using SST and chlorophyll-a data obtained from daily MODIS level 3 during 2006–2016, this study demonstrated the evidence on how bathymetry and topography modified the effect of southeasterly wind on the spatial variability of SST and chlorophyll-a. All datasets were composed into monthly and monthly climatology. The area in the center of Sunda Strait had the lowest chlorophyll-a concentration and the warmest SST during the peak of upwelling season. The deep bottom topography and the absence of barrier land prevented the generation of wind driven coastal upwelling. However, the chlorophyll-a concentration in this area had the highest correlation with the wind speed which means that the variation of chlorophyll-a concentration in this area was highly depended on the variability of wind. On the other hand, the areas with shallow bathymetry and in front of Panaitan and Java Islands had higher chlorophyll-a concentration and cooler SSTs.

Broadband acoustic wave propagation across sloping topography covered by sea ice

NASA Astrophysics Data System (ADS)

Badiey, M.; Wan, L.; Eickmeier, J.; Muenchow, A.; Ryan, P. A.

2017-12-01

The Canada Basin Acoustic Propagation Experiment (CANAPE) quantifies how sound generated in the deep Basin is received on the continental shelf. The two regimes, deep basin and shallow shelves, are separated by a 30-km wide region where the bottom changes from 1000-m to 100-m. This narrow region focuses and traps kinetic energy that surface wind forcing inputs into the ocean over a wide region with periodicities of days to months. As a result, ocean temperature and speed of sound are more variable near sloping topography than they are over either deep basins or shallow shelves. In contrast to companion CANAPE presentations in this session, here we use sound speed as input to predict likely propagation paths and transmission losses across the continental slope with a two-dimensional parabolic model (2D PE). Intensity fluctuations due to the changing bathymetry, water column oceanography, and the scattering from ice cover for broadband signals are checked against measured broadband acoustic signals that were collected simultaneously with the oceanographic measurements for a long period. Differences between measured and calculated transmission loss can be the result of out of plane acoustic paths requiring 3D PE modeling for future studies. [Work supported by ONR code 322 OA].

Viscous relaxation as a prerequisite for tectonic resurfacing on Ganymede: Insights from numerical models of lithospheric extension

USGS Publications Warehouse

Bland, Michael T.; McKinnon, William B.

2018-01-01

Ganymede’s bright terrain formed during a near-global resurfacing event (or events) that produced both heavily tectonized and relatively smooth terrains. The mechanism(s) by which resurfacing occurred on Ganymede (e.g., cryovolcanic or tectonic), and the relationship between the older, dark and the younger, bright terrain are fundamental to understanding the geological evolution of the satellite. Using a two-dimensional numerical model of lithospheric extension that has previously been used to successfully simulate surface deformation consistent with grooved terrain morphologies, we investigate whether large-amplitude preexisting topography can be resurfaced (erased) by extension (i.e., tectonic resurfacing). Using synthetically produced initial topography, we show that when the total relief of the initial topography is larger than 25–50 m, periodic groove-like structures fail to form. Instead, extension is localized in a few individual, isolated troughs. These results pose a challenge to the tectonic resurfacing hypothesis. We further investigate the effects of preexisting topography by performing suites of simulations initialized with topography derived from digital terrain models of Ganymede’s surface. These include dark terrain, fresh (relatively deep) impact craters, smooth bright terrain, and a viscously relaxed impact crater. The simulations using dark terrain and fresh impact craters are consistent with our simulations using synthetic topography: periodic groove-like deformation fails to form. In contrast, when simulations were initialized with bright smooth terrain topography, groove-like deformation results from a wide variety of heat flow and surface temperature conditions. Similarly, when a viscously relaxed impact crater was used, groove-like structures were able to form during extension. These results suggest that tectonic resurfacing may require that the amplitude of the initial topography be reduced before extension begins. We emphasize that viscous relaxation may be the key to enabling tectonic resurfacing, as the heat fluxes associated with groove terrain formation are also capable of reducing crater topography through viscous relaxation. For long-wavelength topography (large craters) viscous relaxation is unavoidable. We propose that the resurfacing of Ganymede occurred through a combination of viscous relaxation, tectonic resurfacing, cryovolcanism and, at least in a few cases, band formation. Variations in heat flow and strain magnitudes across Ganymede likely produced the complex variety of terrain types currently observed.

Viscous relaxation as a prerequisite for tectonic resurfacing on Ganymede: Insights from numerical models of lithospheric extension

NASA Astrophysics Data System (ADS)

Bland, Michael T.; McKinnon, William B.

2018-05-01

Ganymede's bright terrain formed during a near-global resurfacing event (or events) that produced both heavily tectonized and relatively smooth terrains. The mechanism(s) by which resurfacing occurred on Ganymede (e.g., cryovolcanic or tectonic), and the relationship between the older, dark and the younger, bright terrain are fundamental to understanding the geological evolution of the satellite. Using a two-dimensional numerical model of lithospheric extension that has previously been used to successfully simulate surface deformation consistent with grooved terrain morphologies, we investigate whether large-amplitude preexisting topography can be resurfaced (erased) by extension (i.e., tectonic resurfacing). Using synthetically produced initial topography, we show that when the total relief of the initial topography is larger than 25-50 m, periodic groove-like structures fail to form. Instead, extension is localized in a few individual, isolated troughs. These results pose a challenge to the tectonic resurfacing hypothesis. We further investigate the effects of preexisting topography by performing suites of simulations initialized with topography derived from digital terrain models of Ganymede's surface. These include dark terrain, fresh (relatively deep) impact craters, smooth bright terrain, and a viscously relaxed impact crater. The simulations using dark terrain and fresh impact craters are consistent with our simulations using synthetic topography: periodic groove-like deformation fails to form. In contrast, when simulations were initialized with bright smooth terrain topography, groove-like deformation results from a wide variety of heat flow and surface temperature conditions. Similarly, when a viscously relaxed impact crater was used, groove-like structures were able to form during extension. These results suggest that tectonic resurfacing may require that the amplitude of the initial topography be reduced before extension begins. We emphasize that viscous relaxation may be the key to enabling tectonic resurfacing, as the heat fluxes associated with groove terrain formation are also capable of reducing crater topography through viscous relaxation. For long-wavelength topography (large craters) viscous relaxation is unavoidable. We propose that the resurfacing of Ganymede occurred through a combination of viscous relaxation, tectonic resurfacing, cryovolcanism and, at least in a few cases, band formation. Variations in heat flow and strain magnitudes across Ganymede likely produced the complex variety of terrain types currently observed.

The Study of Watershed Topography Characteristics in Vakhsh River Based on ZY3-DSM

NASA Astrophysics Data System (ADS)

Cui, Y.; Chen, L.; Li, M.; Men, Z.

2018-04-01

The Vakhsh River is one of the major rivers in Tajikistan. The quantitative analysis of watershed topography and developmental characteristics in Vakhsh River catchment can reflect the morphological characteristics of the region, which is of great significance for revealing the quantitative relationship between the hydrological and the geomorphological process. In this paper, the D8 algorithm and the spatial analysis method were used to extract the river networks, the catchment boundary profile lines and the longitudinal valley profile lines of the four major tributaries in the Vakhsh River from the ZY3-DSM of 10 meters resolution. On this basis, five quantitative indices including the frequency of wave, amplitude of wave, gully density, the longitudinal slope and roundness rate were used to analyze the watershed landform and its development degree. According to the experimental results, the catchment have a high surface complexity and a mature landform. Yovonsu river catchment which is in the downstream of Vakhsh River is oval and has low terrain complexity with large frequency and small amplitude. Among the midstream and upstream, the Mukson River has developed into geriatric terrain that is the most mature and has the highest surface complex, while the Obikhingon River and the Kizilsu River have developed into a stable maternal terrain. In terms of topography, the boundary elevation of the Obikhingon is basically in accordance with the normal distribution, while the Kizilsu and the Muksu show a peak state with elevations of 4,000-5,000 m and 5,000-5,500 m, respectively.

Rates and mechanisms of turbulent dissipation and mixing in the Southern Ocean: Results from the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES)

NASA Astrophysics Data System (ADS)

Sheen, K. L.; Brearley, J. A.; Naveira Garabato, A. C.; Smeed, D. A.; Waterman, S.; Ledwell, J. R.; Meredith, M. P.; St. Laurent, L.; Thurnherr, A. M.; Toole, J. M.; Watson, A. J.

2013-06-01

The spatial distribution of turbulent dissipation rates and internal wavefield characteristics is analyzed across two contrasting regimes of the Antarctic Circumpolar Current (ACC), using microstructure and finestructure data collected as part of the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES). Mid-depth turbulent dissipation rates are found to increase from O>(1×10-10Wkg -1>) in the Southeast Pacific to O>(1×10-9Wkg -1>) in the Scotia Sea, typically reaching 3×10-9Wkg -1 within a kilometer of the seabed. Enhanced levels of turbulent mixing are associated with strong near-bottom flows, rough topography, and regions where the internal wavefield is found to have enhanced energy, a less-inertial frequency content and a dominance of upward propagating energy. These results strongly suggest that bottom-generated internal waves play a major role in determining the spatial distribution of turbulent dissipation in the ACC. The energy flux associated with the bottom internal wave generation process is calculated using wave radiation theory, and found to vary between 0.8 mW m-2 in the Southeast Pacific and 14 mW m-2 in the Scotia Sea. Typically, 10%-30% of this energy is found to dissipate within 1 km of the seabed. Comparison between turbulent dissipation rates inferred from finestructure parameterizations and microstructure-derived estimates suggests a significant departure from wave-wave interaction physics in the near-field of wave generation sites.

A parameter optimization tool for evaluating the physical consistency of the plot-scale water budget of the integrated eco-hydrological model GEOtop in complex terrain

NASA Astrophysics Data System (ADS)

Bertoldi, Giacomo; Cordano, Emanuele; Brenner, Johannes; Senoner, Samuel; Della Chiesa, Stefano; Niedrist, Georg

2017-04-01

In mountain regions, the plot- and catchment-scale water and energy budgets are controlled by a complex interplay of different abiotic (i.e. topography, geology, climate) and biotic (i.e. vegetation, land management) controlling factors. When integrated, physically-based eco-hydrological models are used in mountain areas, there are a large number of parameters, topographic and boundary conditions that need to be chosen. However, data on soil and land-cover properties are relatively scarce and do not reflect the strong variability at the local scale. For this reason, tools for uncertainty quantification and optimal parameters identification are essential not only to improve model performances, but also to identify most relevant parameters to be measured in the field and to evaluate the impact of different assumptions for topographic and boundary conditions (surface, lateral and subsurface water and energy fluxes), which are usually unknown. In this contribution, we present the results of a sensitivity analysis exercise for a set of 20 experimental stations located in the Italian Alps, representative of different conditions in terms of topography (elevation, slope, aspect), land use (pastures, meadows, and apple orchards), soil type and groundwater influence. Besides micrometeorological parameters, each station provides soil water content at different depths, and in three stations (one for each land cover) eddy covariance fluxes. The aims of this work are: (I) To present an approach for improving calibration of plot-scale soil moisture and evapotranspiration (ET). (II) To identify the most sensitive parameters and relevant factors controlling temporal and spatial differences among sites. (III) Identify possible model structural deficiencies or uncertainties in boundary conditions. Simulations have been performed with the GEOtop 2.0 model, which is a physically-based, fully distributed integrated eco-hydrological model that has been specifically designed for mountain regions, since it considers the effect of topography on radiation and water fluxes and integrates a snow module. A new automatic sensitivity and optimization tool based on the Particle Swarm Optimization theory has been developed, available as R package on https://github.com/EURAC-Ecohydro/geotopOptim2. The model, once calibrated for soil and vegetation parameters, predicts the plot-scale temporal SMC dynamics of SMC and ET with a RMSE of about 0.05 m3/m3 and 40 W/m2, respectively. However, the model tends to underestimate ET during summer months over apple orchards. Results show how most sensitive parameters are both soil and canopy structural properties. However, ranking is affected by the choice of the target function and local topographic conditions. In particular, local slope/aspect influences results in stations located over hillslopes, but with marked seasonal differences. Results for locations in the valley floor are strongly controlled by the choice of the bottom water flux boundary condition. The poorer model performances in simulating ET over apple orchards could be explained by a model structural deficiency in representing the stomatal control on vapor pressure deficit for this particular type of vegetation. The results of this sensitivity could be extended to other physically distributed models, and also provide valuable insights for optimizing new experimental designs.

Emplacement of the Rocche Rosse rhyolite lava flow (Lipari, Aeolian Islands)

NASA Astrophysics Data System (ADS)

Bullock, Liam A.; Gertisser, Ralf; O'Driscoll, Brian

2018-05-01

The Rocche Rosse lava flow marks the most recent rhyolitic extrusion on Lipari island (Italy), and preserves evidence for a multi-stage emplacement history. Due to the viscous nature of the advancing lava (108 to 1010 Pa s), indicators of complex emplacement processes are preserved in the final flow. This study focuses on structural mapping of the flow to highlight the interplay of cooling, crust formation and underlying slope in the development of rhyolitic lavas. The flow is made up of two prominent lobes, small (< 0.2 m) to large (> 0.2 m) scale folding and a channelled geometry. Foliations dip at 2-4° over the flatter topography close to the vent, and up to 30-50° over steeper mid-flow topography. Brittle faults, tension gashes and conjugate fractures are also evident across flow. Heterogeneous deformation is evident through increasing fold asymmetry from the vent due to downflow cooling and stagnation. A steeper underlying topography mid-flow led to development of a channelled morphology, and compression at topographic breaks resulted in fold superimposition in the channel. We propose an emplacement history that involved the evolution through five stages, each associated with the following flow regimes: (1) initial extrusion, crustal development and small scale folding; (2) extensional strain, stretching lineations and channel development over steeper topography; (3) compression at topographic break, autobrecciation, lobe development and medium scale folding; (4) progressive deformation with stagnation, large-scale folding and re-folding; and (5) brittle deformation following flow termination. The complex array of structural elements observed within the Rocche Rosse lava flow facilitates comparisons to be made with actively deforming rhyolitic lava flows at the Chilean volcanoes of Chaitén and Cordón Caulle, offering a fluid dynamic and structural framework within which to evaluate our data.

3-D frequency-domain seismic wave modelling in heterogeneous, anisotropic media using a Gaussian quadrature grid approach

NASA Astrophysics Data System (ADS)

Zhou, Bing; Greenhalgh, S. A.

2011-01-01

We present an extension of the 3-D spectral element method (SEM), called the Gaussian quadrature grid (GQG) approach, to simulate in the frequency-domain seismic waves in 3-D heterogeneous anisotropic media involving a complex free-surface topography and/or sub-surface geometry. It differs from the conventional SEM in two ways. The first is the replacement of the hexahedral element mesh with 3-D Gaussian quadrature abscissae to directly sample the physical properties or model parameters. This gives a point-gridded model which more exactly and easily matches the free-surface topography and/or any sub-surface interfaces. It does not require that the topography be highly smooth, a condition required in the curved finite difference method and the spectral method. The second is the derivation of a complex-valued elastic tensor expression for the perfectly matched layer (PML) model parameters for a general anisotropic medium, whose imaginary parts are determined by the PML formulation rather than having to choose a specific class of viscoelastic material. Furthermore, the new formulation is much simpler than the time-domain-oriented PML implementation. The specified imaginary parts of the density and elastic moduli are valid for arbitrary anisotropic media. We give two numerical solutions in full-space homogeneous, isotropic and anisotropic media, respectively, and compare them with the analytical solutions, as well as show the excellent effectiveness of the PML model parameters. In addition, we perform numerical simulations for 3-D seismic waves in a heterogeneous, anisotropic model incorporating a free-surface ridge topography and validate the results against the 2.5-D modelling solution, and demonstrate the capability of the approach to handle realistic situations.

Measuring floodplain spatial patterns using continuous surface metrics at multiple scales

USGS Publications Warehouse

Scown, Murray W.; Thoms, Martin C.; DeJager, Nathan R.

2015-01-01

Interactions between fluvial processes and floodplain ecosystems occur upon a floodplain surface that is often physically complex. Spatial patterns in floodplain topography have only recently been quantified over multiple scales, and discrepancies exist in how floodplain surfaces are perceived to be spatially organised. We measured spatial patterns in floodplain topography for pool 9 of the Upper Mississippi River, USA, using moving window analyses of eight surface metrics applied to a 1 × 1 m2 DEM over multiple scales. The metrics used were Range, SD, Skewness, Kurtosis, CV, SDCURV,Rugosity, and Vol:Area, and window sizes ranged from 10 to 1000 m in radius. Surface metric values were highly variable across the floodplain and revealed a high degree of spatial organisation in floodplain topography. Moran's I correlograms fit to the landscape of each metric at each window size revealed that patchiness existed at nearly all window sizes, but the strength and scale of patchiness changed within window size, suggesting that multiple scales of patchiness and patch structure exist in the topography of this floodplain. Scale thresholds in the spatial patterns were observed, particularly between the 50 and 100 m window sizes for all surface metrics and between the 500 and 750 m window sizes for most metrics. These threshold scales are ~ 15–20% and 150% of the main channel width (1–2% and 10–15% of the floodplain width), respectively. These thresholds may be related to structuring processes operating across distinct scale ranges. By coupling surface metrics, multi-scale analyses, and correlograms, quantifying floodplain topographic complexity is possible in ways that should assist in clarifying how floodplain ecosystems are structured.

Extreme precipitation forecasting in the Chilean Andean region with complex topography using the Weather Research and Forecasting (WRF) model

NASA Astrophysics Data System (ADS)

Gironás, J.; Yáñez Morroni, G.; Caneo, M.; Delgado, R.

2017-12-01

The Weather Research and Forecasting (WRF) model is broadly used for weather forecasting, hindcasting and researching due to its good performance. However, the atmospheric conditions for simulating are not always optimal when it includes complex topographies: affecting WRF mathematical stability and convergence, therefore, its performance. As Chile is a country strongly characterized by a complex topography and high gradients of elevation, WRF is ineffective resolving Chilean mountainous terrain and foothills. The need to own an effective weather forecasting tool relies on that Chile's main cities are located in these regions. Furthermore, the most intense rainfall events take place here, commonly caused by the presence of cutoff lows. This work analyzes a microphysics scheme ensemble to enhance initial forecasts made by the Chilean Weather Agency (DMC). These forecasts were made over the Santiago piedmont, in Quebrada de Ramón watershed, located upstream an urban area highly populated. In this region a non-existing planning increases the potential damage of a flash flood. An initial testing was made over different vertical levels resolution (39 and 50 levels), and subsequently testing with land use and surface models, and finally with the initial and boundary condition data (GFS/FNL). Our task made emphasis in analyzing microphysics and lead time (3 to 5 days before the storm peak) in the computational simulations over three extreme rainfall events between 2015 and 2017. WRF shortcoming are also related to the complex configuration of the synoptic events, even when the steep topography difficult the rainfall event peak amount, and to a lesser degree, the exact rainfall event beginning prediction. No evident trend was found in the lead time, but as expected, better results in rainfall and zero isotherm height are obtained with smaller anticipation. We found that WRF do predict properly the N-hours with the biggest amount of rainfall (5 hours corresponding to Quebrada de Ramón's time of concentration) and the temperatures during the event. This is a fundamental input to a hydrological model that could forecast flash floods. Finally, WSM-6Class microphysics was chosen as the one with best performance, but a geostatistical approach to countervail WRF forecasts' shortcomings over Andean piedmont is required.

a Numerical Study of Basic Coastal Upwelling Processes.

NASA Astrophysics Data System (ADS)

Li, Zhihong

Available from UMI in association with The British Library. Two-dimensional (2-D) and three-dimensional (3 -D) numerical models with a second order turbulence closure are developed for the study of coastal upwelling processes. A logarithmic coordinate system is introduced to obtain increased resolution in the regions near the surface and bottom where high velocity shear occurs and in the upwelling zone where its width is confined to the coast. In the experiments performed in the 2-D model an ocean initially at rest is driven by a spatially uniform alongshore wind-stress. There is a development of an offshore flow in the surface layer and an onshore flow below the surface layer. In the wind-stress direction there is a development of a coastal surface jet. The neglect of the alongshore pressure gradient leads to the intensification of the jet, and the concentration of the onshore flow in an over-developed Ekman layer yielding an unrealistic deepening of a bottom mixed layer. When bathymetric variations are introduced, some modifications in the dynamics of upwelling are observed. On the shelf region there is another upwelling zone and isotherms are interested with the bottom topography. When an alongshore pressure gradient is added externally into the model, the strength of the coastal jet decreases and a coastal undercurrent exists at greater depth. In addition the return onshore flow is largely independent of depth and the deepening of the bottom mixed layer disappears. In the experiments performed in the 3-D model a wind-stress with limited domain is used. Coastally trapped waves are generated and propagate along the coastline leading to a development of an alongshore pressure gradient, which has a significant effect on upwelling. The evolution of the alongshore flow, vertical velocity and the temperature is determined by both remote and local wind due to the propagation of waves. As the integration proceeds, the flow pattern becomes remarkably 3-dimensional. Finally the influence of bathymetric variations on upwelling processes is examined.

Mean Lagrangian drift in continental shelf waves

NASA Astrophysics Data System (ADS)

Drivdal, M.; Weber, J. E. H.

2012-04-01

The time- and depth-averaged mean drift induced by barotropic continental shelf waves (CSW's) is studied theoretically for idealized shelf topography by calculating the mean volume fluxes to second order in wave amplitude. The waves suffer weak spatial damping due to bottom friction, which leads to radiation stress forcing of the mean fluxes. In terms of the total wave energy density E¯ over the shelf region, the radiation stress tensor component S¯11 for CSW's is found to be different from that of shallow water surface waves in a non-rotating ocean. For CSW's, the ratio ¯S11/¯E depends strongly on the wave number. The mean Lagrangian flow forced by the radiation stress can be subdivided into a Stokes drift and a mean Eulerian drift current. The magnitude of the latter depends on the ratio between the radiation stress and the bottom stress acting on the mean flow. When the effect of bottom friction acts equally strong on the waves and the mean current, calculations for short CSW's show that the Stokes drift and the friction-dependent wave-induced mean Eulerian current varies approximately in anti-phase over the shelf, and that the latter is numerically the largest. For long CSW's they are approximately in phase. In both cases the mean Lagrangian current, which is responsible for the net particle drift, has its largest numerical value at the coast on the shallow part of the shelf. Enhancing the effect of bottom friction on the Eulerian mean flow, results in a general current speed reduction, as well as a change in spatial structure for long waves. Applying realistic physical parameters for the continental shelf west of Norway, calculations yield along-shelf mean drift velocities for short CSW's that may be important for the transport of biological material, neutral tracers, and underwater plumes of dissolved oil from deep water drilling accidents.

Radiation stress and mean drift in continental shelf waves

NASA Astrophysics Data System (ADS)

Weber, Jan Erik H.; Drivdal, Magnus

2012-03-01

The time- and depth-averaged mean drift induced by barotropic continental shelf waves (CSW's) is studied theoretically for idealized shelf topography by calculating the mean volume fluxes to second order in wave amplitude. The waves suffer weak spatial damping due to bottom friction, which leads to radiation stress forcing of the mean fluxes. In terms of the total wave energy density E̅̅ over the shelf region, the radiation stress tensor component S̅11 for CSW's is found to be different from that of shallow water surface waves in a non-rotating ocean. For CSW's, the ratio S̅11/E̅ depends strongly on the wave number. The mean Lagrangian flow forced by the radiation stress can be subdivided into a Stokes drift and a mean Eulerian drift current. The magnitude of latter depends on ratio between the radiation stress and the bottom stress acting on the mean flow. When the effect of bottom friction acts equally strong on the waves and the mean current, calculations for short CSW's show that the Stokes drift and the friction-dependent wave-induced mean Eulerian current varies approximately in anti-phase over the shelf, and that the latter is numerically the largest. For long CSW's they are approximately in phase. In both cases the mean Lagrangian current, which is responsible for the net particle drift, has its largest numerical value at the coast on the shallow part of the shelf. Enhancing the effect of bottom friction on the Eulerian mean flow, results in a general current speed reduction, as well as a change in spatial structure for long waves. Applying realistic physical parameters for the continental shelf west of Norway, calculations yield along-shelf mean drift velocities for short CSW's that may be important for the transport of biological material, neutral tracers, and underwater plumes of dissolved oil from deepwater drilling accidents.

Continuum Statistics of the Bed Topography in a Sandy River

NASA Astrophysics Data System (ADS)

McElroy, B.; Jerolmack, D.; Mohrig, D.

2005-12-01

Temporal and spatial variabilities in the bed geometry of sandy rivers contain information about processes of sediment transport that has not been fully appreciated. This is primarily due to a disparity between the dynamic nature of the sediment-fluid interface and the relatively static methods of surveying bed elevation, e.g. single profiles or point measurements. High resolution topographic data is paramount to understanding the dynamic behavior of sandy beds. We present and analyze a data set collected on a 2cm x 2cm grid at 1 minute intervals and with a vertical precision of ~1mm. This was accomplished by using Lambert-Beer's Law for attenuation of light to transform low-altitude aerial photographs into digital elevation models. Forty successive models were generated for a 20 m by 30 m section of channel bottom of the N. Loup River, Nebraska. To calculate the average, whole bed translation rate, or celerity, cross-correlations between a reference bed topography and its proceeding configurations were determined. Time differences between models were related to the shift lengths that produced correlation maxima for each model pair. The result is a celerity of ~3.8cm/s with a correlation coefficient of 0.992. Bed topography also deforms while it translates, and this can be seen as a secular decrease of correlation maxima. The form of this decrease in correlation is exponential, and from it an interface half-life is defined. In this case, the bed had become extensively reorganized within ~40 minutes, the time necessary to translate the bed one wavelength of the dominant roughness element. Although the bed is continuously deforming, its roughness is statistically stationary. Essentially, a mean roughness is maintained as the bed creates new realizations of itself. The dynamic nature of the whole bed and similarly transient behavior of individual elements suggests the utility of a holistic approach to studying the feedback between bed topography, fluid flow, and sediment transport. Furthermore, it raises questions about the usefulness of detailed analysis of flow and transport over individual forms.

Environmental and bathymetric influences on abyssal bait-attending communities of the Clarion Clipperton Zone

NASA Astrophysics Data System (ADS)

Leitner, Astrid B.; Neuheimer, Anna B.; Donlon, Erica; Smith, Craig R.; Drazen, Jeffrey C.

2017-07-01

The Clarion-Clipperton Zone (CCZ) is one of the richest manganese nodule provinces in the world and has recently become a focus area for manganese nodule mining interests. However, this vast area remains poorly studied and highly undersampled. In this study, the abyssal bait-attending fauna is documented for the first time using a series of baited camera deployments in various locations across the CCZ. A bait-attending community intermediate between those typical of the California margin and Hawaii was found in the larger CCZ area, generally dominated by rattail fishes, dendrobranchiate shrimp, and zoarcid and ophidiid fishes. Additionally, the western and eastern ends of the CCZ had different communities, with the western region characterized by decreased dominance of rattails and small shrimps and increased dominance of ophidiids (especially Bassozetus sp. and Barathrites iris) and large shrimps. This trend may be related to increasing distance from the continental margin. We also test the hypothesis that bait-attending communities change across the CCZ in response to key environmental predictors, especially topography and nodule cover. Our analyses showed that higher nodule cover and elevated topography, as quantified using the benthic positioning index (BPI), increase bait-attending community diversity. Elevated topography generally had higher relative abundances, but taxa also showed differing responses to the BPI metric and bottom temperature, causing significant community compositional change over varying topography and temperatures. Larger individuals of the dominant scavenger in the CCZ, Coryphaenoides spp., were correlated with areas of higher nodule cover and with abyssal hills, suggesting these areas may be preferred habitat. Our results suggest that nodule cover is important to all levels of the benthic ecosystem and that nodule mining could have negative impacts on even the top-level predators and scavengers in the CCZ. Additionally, there is continuous change in diversity, dominance, and relative abundance across the CCZ and across gradients in bathymetric and oceanographic variables. This work increased the understanding of the biogeography of the demersal scavengers and top predators as well as the key environmental drivers of their distributions across the CCZ in order to better predict and manage the impacts of nodule mining.

Stereo Pair, Honolulu, Oahu

NASA Technical Reports Server (NTRS)

2000-01-01

Honolulu, on the island of Oahu, is a large and growing urban area. This stereoscopic image pair, combining a Landsat image with topography measured by the Shuttle Radar Topography Mission (SRTM), shows how topography controls the urban pattern. This color image can be viewed in 3-D by viewing the left image with the right eye and the right image with the left eye (cross-eyed viewing), or by downloading and printing the image pair, and viewing them with a stereoscope.

Features of interest in this scene include Diamond Head (an extinct volcano near the bottom of the image), Waikiki Beach (just above Diamond Head), the Punchbowl National Cemetary (another extinct volcano, near the image center), downtown Honolulu and Honolulu harbor (image left-center), and offshore reef patterns. The slopes of the Koolau mountain range are seen in the right half of the image. Clouds commonly hang above ridges and peaks of the Hawaiian Islands, but in this synthesized stereo rendition appear draped directly on the mountains. The clouds are actually about 1000 meters (3300 feet) above sea level.

This stereoscopic image pair was generated using topographic data from the Shuttle Radar Topography Mission, combined with a Landsat 7 Thematic Mapper image collected at the same time as the SRTM flight. The topography data were used to create two differing perspectives, one for each eye. When stereoscopically merged, the result is a vertically exaggerated view of the Earth's surface in its full three dimensions. The United States Geological Survey's Earth Resources Observations Systems (EROS) Data Center, Sioux Falls, South Dakota, provided the Landsat data.

The Shuttle Radar Topography Mission (SRTM), launched on February 11, 2000, used the same radar instrument that comprised the Spaceborne Imaging Radar-C/X-Band Synthetic Aperture Radar (SIR-C/X-SAR) that flew twice on the Space Shuttle Endeavour in 1994. The mission was designed to collect three-dimensional measurements of the Earth's surface. To collect the 3-D data, engineers added a 60-meter-long (200-foot) mast, an additional C-band imaging antenna and improved tracking and navigation devices. The mission is a cooperative project between the National Aeronautics and Space Administration (NASA), the National Imagery and Mapping Agency (NIMA) and the German (DLR) and Italian (ASI)space agencies. It is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Earth Science Enterprise, Washington, DC.

Size: 11 by 20 kilometers (7 by 13 miles) Location: 21.3 deg. North lat., 157.9 deg. West lon. Orientation: North toward upper right Original Data Resolution: SRTM, 30 meters (99 feet); Landsat, 15 meters (50 feet) Date Acquired: SRTM, February 18, 2000; Landsat February 12, 2000 Image: NASA/JPL/NIMA

Compressive Optical Imaging Systems - Theory, Devices and Implementation

DTIC Science & Technology

2009-04-01

Radon projections of the object distribution. However, more complex coding strategies have long been applied in imaging [5] and spectroscopy [6, 7...the bottom right is yellow-green, and the bottom left is yellow- orange . Note the the broad spectral ranges have made the spectral patterns very...Mr - Measured spectra Jf **v\\* f \\gt yellow orange +f •) *\\ - measured spectra*^* 1 S__ ,*3r if ^Sfc

Laser altimeter observations from MESSENGER's first Mercury flyby.

PubMed

Zuber, Maria T; Smith, David E; Solomon, Sean C; Phillips, Roger J; Peale, Stanton J; Head, James W; Hauck, Steven A; McNutt, Ralph L; Oberst, Jürgen; Neumann, Gregory A; Lemoine, Frank G; Sun, Xiaoli; Barnouin-Jha, Olivier; Harmon, John K

2008-07-04

A 3200-kilometers-long profile of Mercury by the Mercury Laser Altimeter on the MESSENGER spacecraft spans approximately 20% of the near-equatorial region of the planet. Topography along the profile is characterized by a 5.2-kilometer dynamic range and 930-meter root-mean-square roughness. At long wavelengths, topography slopes eastward by 0.02 degrees , implying a variation of equatorial shape that is at least partially compensated. Sampled craters on Mercury are shallower than their counterparts on the Moon, at least in part the result of Mercury's higher gravity. Crater floors vary in roughness and slope, implying complex modification over a range of length scales.

Process for structural geologic analysis of topography and point data

DOEpatents

Eliason, Jay R.; Eliason, Valerie L. C.

1987-01-01

A quantitative method of geologic structural analysis of digital terrain data is described for implementation on a computer. Assuming selected valley segments are controlled by the underlying geologic structure, topographic lows in the terrain data, defining valley bottoms, are detected, filtered and accumulated into a series line segments defining contiguous valleys. The line segments are then vectorized to produce vector segments, defining valley segments, which may be indicative of the underlying geologic structure. Coplanar analysis is performed on vector segment pairs to determine which vectors produce planes which represent underlying geologic structure. Point data such as fracture phenomena which can be related to fracture planes in 3-dimensional space can be analyzed to define common plane orientation and locations. The vectors, points, and planes are displayed in various formats for interpretation.

Large-Eddy Simulations of Atmospheric Flows Over Complex Terrain Using the Immersed-Boundary Method in the Weather Research and Forecasting Model

NASA Astrophysics Data System (ADS)

Ma, Yulong; Liu, Heping

2017-12-01

Atmospheric flow over complex terrain, particularly recirculation flows, greatly influences wind-turbine siting, forest-fire behaviour, and trace-gas and pollutant dispersion. However, there is a large uncertainty in the simulation of flow over complex topography, which is attributable to the type of turbulence model, the subgrid-scale (SGS) turbulence parametrization, terrain-following coordinates, and numerical errors in finite-difference methods. Here, we upgrade the large-eddy simulation module within the Weather Research and Forecasting model by incorporating the immersed-boundary method into the module to improve simulations of the flow and recirculation over complex terrain. Simulations over the Bolund Hill indicate improved mean absolute speed-up errors with respect to previous studies, as well an improved simulation of the recirculation zone behind the escarpment of the hill. With regard to the SGS parametrization, the Lagrangian-averaged scale-dependent Smagorinsky model performs better than the classic Smagorinsky model in reproducing both velocity and turbulent kinetic energy. A finer grid resolution also improves the strength of the recirculation in flow simulations, with a higher horizontal grid resolution improving simulations just behind the escarpment, and a higher vertical grid resolution improving results on the lee side of the hill. Our modelling approach has broad applications for the simulation of atmospheric flows over complex topography.

High frequency seismic signal generated by landslides on complex topographies: from point source to spatially distributed sources

NASA Astrophysics Data System (ADS)

Mangeney, A.; Kuehnert, J.; Capdeville, Y.; Durand, V.; Stutzmann, E.; Kone, E. H.; Sethi, S.

2017-12-01

During their flow along the topography, landslides generate seismic waves in a wide frequency range. These so called landquakes can be recorded at very large distances (a few hundreds of km for large landslides). The recorded signals depend on the landslide seismic source and the seismic wave propagation. If the wave propagation is well understood, the seismic signals can be inverted for the seismic source and thus can be used to get information on the landslide properties and dynamics. Analysis and modeling of long period seismic signals (10-150s) have helped in this way to discriminate between different landslide scenarios and to constrain rheological parameters (e.g. Favreau et al., 2010). This was possible as topography poorly affects wave propagation at these long periods and the landslide seismic source can be approximated as a point source. In the near-field and at higher frequencies (> 1 Hz) the spatial extent of the source has to be taken into account and the influence of the topography on the recorded seismic signal should be quantified in order to extract information on the landslide properties and dynamics. The characteristic signature of distributed sources and varying topographies is studied as a function of frequency and recording distance.The time dependent spatial distribution of the forces applied to the ground by the landslide are obtained using granular flow numerical modeling on 3D topography. The generated seismic waves are simulated using the spectral element method. The simulated seismic signal is compared to observed seismic data from rockfalls at the Dolomieu Crater of Piton de la Fournaise (La Réunion).Favreau, P., Mangeney, A., Lucas, A., Crosta, G., and Bouchut, F. (2010). Numerical modeling of landquakes. Geophysical Research Letters, 37(15):1-5.

[Indices of pigment formation in complex cytomorphological research on human pigmented skin neoplasms].

PubMed

Naleskina, L A

1985-01-01

Analysis of the topography peculiarities and distribution of oxidized melanine and its precursors (DOPA-oxide activity and catecholamine) in pigment nevuses and malignant melanomas of skin shows that the studied peculiarities are a complex of intersupplementary markers of melanine formation, correlate with the quality and the degree of proliferative process expression in tumours of this genesis and may be used for their malignancy rating.

Grayscale lithography-automated mask generation for complex three-dimensional topography

NASA Astrophysics Data System (ADS)

Loomis, James; Ratnayake, Dilan; McKenna, Curtis; Walsh, Kevin M.

2016-01-01

Grayscale lithography is a relatively underutilized technique that enables fabrication of three-dimensional (3-D) microstructures in photosensitive polymers (photoresists). By spatially modulating ultraviolet (UV) dosage during the writing process, one can vary the depth at which photoresist is developed. This means complex structures and bioinspired designs can readily be produced that would otherwise be cost prohibitive or too time intensive to fabricate. The main barrier to widespread grayscale implementation, however, stems from the laborious generation of mask files required to create complex surface topography. We present a process and associated software utility for automatically generating grayscale mask files from 3-D models created within industry-standard computer-aided design (CAD) suites. By shifting the microelectromechanical systems (MEMS) design onus to commonly used CAD programs ideal for complex surfacing, engineering professionals already familiar with traditional 3-D CAD software can readily utilize their pre-existing skills to make valuable contributions to the MEMS community. Our conversion process is demonstrated by prototyping several samples on a laser pattern generator-capital equipment already in use in many foundries. Finally, an empirical calibration technique is shown that compensates for nonlinear relationships between UV exposure intensity and photoresist development depth as well as a thermal reflow technique to help smooth microstructure surfaces.

The Effect of Surface Ice and Topography on the Atmospheric Circulation and Distribution of Nitrogen Ice on Pluto

NASA Astrophysics Data System (ADS)

Rafkin, Scot C. R.; Soto, Alejandro; Michaels, Timothy I.

2016-10-01

A newly developed general circulation model (GCM) for Pluto is used to investigate the impact of a heterogeneous distribution of nitrogen surface ice and large scale topography on Pluto's atmospheric circulation. The GCM is based on the GFDL Flexible Modeling System (FSM). Physics include a gray model radiative-conductive scheme, subsurface conduction, and a nitrogen volatile cycle. The radiative-conductive model takes into account the 2.3, 3.3 and 7.8 μm bands of CH4 and CO, including non-local thermodynamic equilibrium effects. including non-local thermodynamic equilibrium effects. The nitrogen volatile cycle is based on a vapor pressure equilibrium assumption between the atmosphere and surface. Prior to the arrival of the New Horizons spacecraft, the expectation was that the volatile ice distribution on the surface of Pluto would be strongly controlled by the latitudinal temperature gradient. If this were the case, then Pluto would have broad latitudinal bands of both ice covered surface and ice free surface, as dictated by the season. Further, the circulation, and the thus the transport of volatiles, was thought to be driven almost exclusively by sublimation and deposition flows associated with the volatile cycle. In contrast to expectations, images from New Horizon showed an extremely complex, heterogeneous distribution of surface ices draped over substantial and variable topography. To produce such an ice distribution, the atmospheric circulation and volatile transport must be more complex than previously envisioned. Simulations where topography, surface ice distributions, and volatile cycle physics are added individually and in various combinations are used to individually quantify the importance of the general circulation, topography, surface ice distributions, and condensation flows. It is shown that even regional patches of ice or large craters can have global impacts on the atmospheric circulation, the volatile cycle, and hence, the distribution of surface ices. The work demonstrates that explaining Pluto's volatile cycle and the expression of that cycle in the surface ice distributions requires consideration of atmospheric processes beyond simple vapor pressure equilibrium arguments.

Modelling Local Sea-Breeze Flow and Associated Dispersion Patterns Over a Coastal Area in North-East Spain: A Case Study

NASA Astrophysics Data System (ADS)

Soler, M. R.; Arasa, R.; Merino, M.; Olid, M.; Ortega, S.

2011-07-01

The structure and evolution of the sea breeze in the north-west part of the Mediterranean (Catalonia, north-east Spain) is studied both experimentally and, predominantly, using numerical models to increase understanding of sea-breeze structure and three-dimensional (3D) pollution distributions in coastal environments. Sea-breeze components are modelled and analyzed using the fifth-generation Pennsylvania State University-National Centre for Atmospheric Research Mesoscale Model (MM5). The results show that the growth and structure of the sea-breeze circulation is modulated by the synoptic flow and especially by the complex topography of the area. 3D pollution transport in a sea breeze is modelled by coupling the MM5 to the Community Multiscale Air Quality (CMAQ) model, with results indicating that topography and synoptic flow are the main factors modulating horizontal and vertical pollutant transport in sea-breeze episodes. In this way, horizontal dispersion is limited by the complex topography of the area, whilst the sea-breeze flow is intensified by anabatic upslope winds that contribute to vertical pollutant transport. The numerical model results also indicate that the sea-breeze circulation with a weak return flow at upper levels grows due to a synoptic onshore wind component. However, such a sea-breeze circulation is capable of transporting pollutants towards the coast.

Fire and climate variation in western North America from fire-scar and tree-ring networks

Treesearch

Donald A. Falk; E. K. Heyerdahl; P. M. Brown; T. W. Swetnam; E. K. Sutherland; Z. Gedalof; L. Yocom; T. J. Brown

2010-01-01

Fire regimes (i.e., the pattern, frequency and intensity of fire in a region) reflect a complex interplay of bottom-up and top-down controls (Lertzman et al., 1998; Mc Kenzie et al., in press). Bottom-up controls include local variations in topographic, fuel and weather factors at the time of a burn (e.g., fuel moisture and continuity, ignition density and local wind...

Photographic evaluation of the impacts of bottom fishing on benthic epifauna

USGS Publications Warehouse

Collie, J.S.; Escanero, G.A.; Valentine, P.C.

2000-01-01

The gravel sediment habitat on the northern edge of Georges Bank (East coast of North America) is an important nursery area for juvenile fish, and the site of a productive scallop fishery. During two cruises to this area in 1994 we made photographic transects at sites of varying depths that experience varying degrees of disturbance from otter trawling and scallop dredging. Differences between sites were quantified by analyzing videos and still photographs of the sea bottom. Videos were analyzed for sediment types and organism abundance. In the still photos, the percentages of the bottom covered by bushy, plant-like organisms and colonial worm tubes (Filograna implexa) were determined, as was the presence/absence of encrusting bryozoa. Non-colonial organisms were also identified as specifically as possible and sediment type was quantified. Significant differences between disturbed and undisturbed areas were found for the variables measured in the still photos; colonial epifaunal species were conspicuously less abundant at disturbed sites. Results from the videos and still photos were generally consistent although less detail was visible in the videos. Emergent colonial epifauna provide a complex habitat for shrimp, polychaetes, brittle stars and small fish at undisturbed sites. Bottom fishing removes this epifauna, thereby reducing the complexity and species diversity of the benthic community. (C) 2000 International Council for the Exploration of the Sea.

Parametric Study of Urban-Like Topographic Statistical Moments Relevant to a Priori Modelling of Bulk Aerodynamic Parameters

NASA Astrophysics Data System (ADS)

Zhu, Xiaowei; Iungo, G. Valerio; Leonardi, Stefano; Anderson, William

2017-02-01

For a horizontally homogeneous, neutrally stratified atmospheric boundary layer (ABL), aerodynamic roughness length, z_0, is the effective elevation at which the streamwise component of mean velocity is zero. A priori prediction of z_0 based on topographic attributes remains an open line of inquiry in planetary boundary-layer research. Urban topographies - the topic of this study - exhibit spatial heterogeneities associated with variability of building height, width, and proximity with adjacent buildings; such variability renders a priori, prognostic z_0 models appealing. Here, large-eddy simulation (LES) has been used in an extensive parametric study to characterize the ABL response (and z_0) to a range of synthetic, urban-like topographies wherein statistical moments of the topography have been systematically varied. Using LES results, we determined the hierarchical influence of topographic moments relevant to setting z_0. We demonstrate that standard deviation and skewness are important, while kurtosis is negligible. This finding is reconciled with a model recently proposed by Flack and Schultz (J Fluids Eng 132:041203-1-041203-10, 2010), who demonstrate that z_0 can be modelled with standard deviation and skewness, and two empirical coefficients (one for each moment). We find that the empirical coefficient related to skewness is not constant, but exhibits a dependence on standard deviation over certain ranges. For idealized, quasi-uniform cubic topographies and for complex, fully random urban-like topographies, we demonstrate strong performance of the generalized Flack and Schultz model against contemporary roughness correlations.

210Pb in the western Indian Ocean: distribution, disequilibrium, and partitioning between dissolved and particulate phases

NASA Astrophysics Data System (ADS)

Chung, Y.

1987-09-01

Dissolved 210Pb profiles are presented for 13 GEOSECS stations in the western Indian Ocean. In surface water away from high southern latitudes, 210Pb is in excess over 226Ra due to the atmospheric fallout from decay of 222Rn. Except in the Circumpolar region, the dissolved 210Pb profiles display a gentle mid-depth maximum similar to the corresponding 226Ra profiles. The 210Pb/ 226Ra activity ratio ranges from 1.6 in the surface water east of Madagascar to 0.4 or less in the bottom water of all the basins. The lowest ratio observed was 0.1 in the Gulf of Aden very close to the continental land mass. A ratio of 0.6 divides the western Indian Ocean horizontally into two portions, with the contour at shallower depth in the north than in the south. The deep water disequilibrium is thus more extensive north of Madagascar than south of it. It appears that locality and bottom topography play a strong role in controlling the distributions of 210Pb and 226Ra as well as their extent of disequilibrium in the water column. The mean residence time for Pb with respect to particulate and boundary scavenging in the deep water ranges from about 15 to 75 years.

Angular momentum budget of the radiational S1 ocean tide

NASA Astrophysics Data System (ADS)

Schindelegger, Michael; Dobslaw, Henryk; Poropat, Lea; Salstein, David; Böhm, Johannes

2016-04-01

The balance of diurnal S1 oceanic angular momentum (OAM) variations through torques at the sea surface and the bottom topography is validated using both a barotropic and a baroclinic numerical tide model. This analysis discloses the extent to which atmosphere-driven S1 forward simulations are reliable for use in studies of high-frequency polar motion and changes in length-of-day. Viscous and dissipative torques associated with wind stress, bottom friction, as well as internal tidal energy conversion are shown to be small, and they are overshadowed by gravitational and pressure-related interaction forces. In particular, the zonal OAM variability of S1 is almost completely balanced by the water pressure torque on the local bathymetry, whereas in the prograde equatorial case also the air pressure torque on the seafloor as well as ellipsoidal contributions from the non-spherical atmosphere and solid Earth must be taken into account. Overall, the OAM budget is well closed in both the axial and the equatorial directions, thus allowing for an identification of the main diurnal angular momentum sinks in the ocean. The physical interaction forces are found to be largest at shelf breaks and continental slopes in low latitudes, with the most dominant contribution coming from the Indonesian archipelago.

Defect printability of alternating phase-shift mask: a critical comparison of simulation and experiment

NASA Astrophysics Data System (ADS)

Ozawa, Ken; Komizo, Tooru; Kikuchi, Koji; Ohnuma, Hidetoshi; Kawahira, Hiroichi

2002-07-01

An alternative phase shift mask (alt-PSM) is a promising device for extending optical lithography to finer design rules. There have been few reports, however, on the mask's ability to identify phase defects. We report here an alt-PSM of a dual-trench type for KrF exposure, with programmed quartz defects used to evaluate defect printability by measuring aerial images with a Zeiss MSM100 measuring system. The experimental results are simulated using the TEMPEST program. First, a critical comparison of the simulation and the experiment is conducted. The actual measured topography of quartz defects are used in the simulation. Moreover, a general simulation study on defect printability using an alt-PSM for ArF exposure is conducted. The defect dimensions, which produce critical CD errors are determined by simulation that takes into account the full 3-dimensional structure of phase defects as well as a simplified structure. The critical dimensions of an isolated defect identified by the alt-PSM of a single-trench type for ArF exposure are 240 nm in bottom diameter and 50 degrees in height (phase) for the cylindrical shape and 240 nm in bottom diameter and 90 degrees in height (phase) for the rotating trapezoidal shape, where the CD error limit is +/- 5%.

Domain-averaged snow depth over complex terrain from flat field measurements

NASA Astrophysics Data System (ADS)

Helbig, Nora; van Herwijnen, Alec

2017-04-01

Snow depth is an important parameter for a variety of coarse-scale models and applications, such as hydrological forecasting. Since high-resolution snow cover models are computational expensive, simplified snow models are often used. Ground measured snow depth at single stations provide a chance for snow depth data assimilation to improve coarse-scale model forecasts. Snow depth is however commonly recorded at so-called flat fields, often in large measurement networks. While these ground measurement networks provide a wealth of information, various studies questioned the representativity of such flat field snow depth measurements for the surrounding topography. We developed two parameterizations to compute domain-averaged snow depth for coarse model grid cells over complex topography using easy to derive topographic parameters. To derive the two parameterizations we performed a scale dependent analysis for domain sizes ranging from 50m to 3km using highly-resolved snow depth maps at the peak of winter from two distinct climatic regions in Switzerland and in the Spanish Pyrenees. The first, simpler parameterization uses a commonly applied linear lapse rate. For the second parameterization, we first removed the obvious elevation gradient in mean snow depth, which revealed an additional correlation with the subgrid sky view factor. We evaluated domain-averaged snow depth derived with both parameterizations using flat field measurements nearby with the domain-averaged highly-resolved snow depth. This revealed an overall improved performance for the parameterization combining a power law elevation trend scaled with the subgrid parameterized sky view factor. We therefore suggest the parameterization could be used to assimilate flat field snow depth into coarse-scale snow model frameworks in order to improve coarse-scale snow depth estimates over complex topography.

Anaglyph with Landsat Overlay, Kamchatka Peninsula, Russia

NASA Technical Reports Server (NTRS)

2000-01-01

This 3-D anaglyph shows an area on the western side of the volcanically active Kamchatka Peninsula, Russia. Red-blue glasses are required to see the 3-D effect. The topographic data are from the first C-band mapping swath of the Shuttle Radar Topography Mission (SRTM). Images from the optical Landsat satellite are overlain on the SRTM topography data. The meandering channel of the Tigil River is seen along the bottom of the image, at the base of steep cliffs. In the middle left of the image, a terrace indicates recent uplift of the terrain and downcutting by the river. High resolution SRTM topographic data will be used by geologists and hydrologists to study the interplay of tectonic uplift and erosion.

This anaglyph was generated using topographic data from the Shuttle Radar Topography Mission to create two differing perspectives of a single image, one perspective for each eye. Each point in the image is shifted slightly, depending on its elevation. When viewed through special glasses, the result is a vertically exaggerated view of the Earth's surface in its full three dimensions. Anaglyph glasses cover the left eye with a red filter and cover the right eye with a blue filter. The United States Geological Survey's Earth Resources Observations Systems (EROS) Data Center, Sioux Falls, South Dakota, provided the Landsat data, which are overlain on the topography.

The Shuttle Radar Topography Mission (SRTM), launched on February 11,2000, uses the same radar instrument that comprised the Spaceborne Imaging Radar-C/X-Band Synthetic Aperture Radar (SIR-C/X-SAR) that flew twice on the Space Shuttle Endeavour in 1994. The mission is designed to collect three-dimensional measurements of the Earth's surface. To collect the 3-D data, engineers added a 60-meter-long (200-foot) mast, an additional C-band imaging antenna and improved tracking and navigation devices. The mission is a cooperative project between the National Aeronautics and Space Administration (NASA), the National Imagery and Mapping Agency (NIMA) and the German (DLR) and Italian (ASI) space agencies. It is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Earth Science Enterprise, Washington, DC.

Size: 5.3 km (3.3 miles) x 6.0 km (3.7 miles) Location: 57 deg. North lat., 159 deg. East lon. Orientation: North at left Original Data Resolution: SRTM 30 meters (99 feet); Landsat 15 meters (45 feet) Date Acquired: February 12, 2000

Assessing and Upgrading Ocean Mixing for the Study of Climate Change

NASA Astrophysics Data System (ADS)

Howard, A. M.; Fells, J.; Lindo, F.; Tulsee, V.; Canuto, V.; Cheng, Y.; Dubovikov, M. S.; Leboissetier, A.

2016-12-01

Climate is critical. Climate variability affects us all; Climate Change is a burning issue. Droughts, floods, other extreme events, and Global Warming's effects on these and problems such as sea-level rise and ecosystem disruption threaten lives. Citizens must be informed to make decisions concerning climate such as "business as usual" vs. mitigating emissions to keep warming within bounds. Medgar Evers undergraduates aid NASA research while learning climate science and developing computer&math skills. To make useful predictions we must realistically model each component of the climate system, including the ocean, whose critical role includes transporting&storing heat and dissolved CO2. We need physically based parameterizations of key ocean processes that can't be put explicitly in a global climate model, e.g. vertical&lateral mixing. The NASA-GISS turbulence group uses theory to model mixing including: 1) a comprehensive scheme for small scale vertical mixing, including convection&shear, internal waves & double-diffusion, and bottom tides 2) a new parameterization for the lateral&vertical mixing by mesoscale eddies. For better understanding we write our own programs. To assess the modelling MATLAB programs visualize and calculate statistics, including means, standard deviations and correlations, on NASA-GISS OGCM output with different mixing schemes and help us study drift from observations. We also try to upgrade the schemes, e.g. the bottom tidal mixing parameterizations' roughness, calculated from high resolution topographic data using Gaussian weighting functions with cut-offs. We study the effects of their parameters to improve them. A FORTRAN program extracts topography data subsets of manageable size for a MATLAB program, tested on idealized cases, to visualize&calculate roughness on. Students are introduced to modeling a complex system, gain a deeper appreciation of climate science, programming skills and familiarity with MATLAB, while furthering climate science by improving our mixing schemes. We are incorporating climate research into our college curriculum. The PI is both a member of the turbulence group at NASA-GISS and an associate professor at Medgar Evers College of CUNY, an urban minority serving institution in central Brooklyn. Supported by NSF Award AGS-1359293.

The Porcupine Bank Canyon coral mounds: oceanographic and topographic steering of deep-water carbonate mound development and associated phosphatic deposition

NASA Astrophysics Data System (ADS)

Mazzini, A.; Akhmetzhanov, A.; Monteys, X.; Ivanov, M.

2012-06-01

The head of a canyon system extending along the western Porcupine Bank (west of Ireland) and which accommodates a large field of giant carbonate mounds was investigated during two cruises (INSS 2000 and TTR-13). Multibeam and sidescan sonar data (600-1,150 m water depth) suggest that the pre-existing seabed topography acts as a significant factor controlling mound distribution and shape. The mounds are concentrated along the edges of the canyon or are associated with a complex fault system traced around the canyon head, comprising escarpments up to 60 m high and several km long. The sampling for geochemical and petrographic analysis of numerous types of authigenic deposits was guided by sidescan sonar and video recordings. Calcite-cemented biogenic rubble was observed at the top and on the flanks of the carbonate mounds, being associated with both living and dead corals ( Lophelia pertusa, Madrepora oculata and occasional Desmophyllum cristagalli). This can plausibly be explained by dissolution of coral debris facilitated by strong currents along the mound tops and flanks. In turn, the dissolved carbon is recycled and precipitated as interstitial micrite. Calcite, dolomite and phosphatic hardgrounds were identified in samples from the escarpment framing the eastern part of the survey area. The laterally extensive phosphatic hardgrounds represent a novel discovery in the region, supplying hard substrata for the establishment of new coral colonies. Based on existing knowledge of regional oceanographic conditions, complemented with new CTD measurements, it is suggested that water column stratification, enhanced bottom currents, and upwelling facilitate the deposition of organic matter, followed by phosphatisation leading to the formation of phosphate-glauconite deposits. The occurrence of strong bottom currents was confirmed by means of video observations combined with acoustic and sampling data, providing circumstantial evidence of fine- to medium-grained sand. Evidently, slope breaks such as escarpments and deep-water canyon headwalls are important structural elements in the development of mature carbonate mounds induced by deep-water coral growth. Stable isotope data show no evidence of methane-derived carbon in the carbonates and lithified sediments of the Porcupine Bank Canyon mounds.

Seismic evidence for the depression of the D″ discontinuity beneath the Caribbean: Implication for slab heating from the Earth's core

NASA Astrophysics Data System (ADS)

Ko, Justin Yen-Ting; Hung, Shu-Huei; Kuo, Ban-Yuan; Zhao, Li

2017-06-01

The lowermost 100-300 km of the Earth's mantle commonly regarded as the thermal boundary layer (TBL) of mantle circulation is characterized by its complex physical properties. Beneath the Caribbean this so-called D″ layer features relatively high velocities and abrupt impedance increase at the top (designated as the D″ discontinuity). These seismic characteristics have been attributed to the accumulation of ancient subducted slab material and the phase transition in the major lower mantle mineral of pervoskite. Geodynamic models predict that the blanketing cold slabs may trap enough heat from core to be buoyantly destabilized, and eventually broken apart and entrained into the bottom of the convection cell. Here we explore the D″ structure with unprecedented resolution through modeling traveltimes, amplitudes, and waveform shapes from the USArray. We find an east-to-west asymmetrical undulation of the D″ discontinuity with a V-shaped depression of ∼70-160 km over a lateral distance of 600 km beneath northern South America. The shear velocity perturbations vary in the same trend showing the most pronounced reduction of ∼3-4% below the thinnest D″ layer in close proximity to an intermittently undetected discontinuity. The strong correlation between the D″ topography and velocity variations indicates the phase transition boundary has been perturbed or even disrupted by the large lateral temperature gradient of slab material which has been reheated from the core over extended periods of time.

Jellies under ice: ROV observations from the Arctic 2005 hidden ocean expedition

NASA Astrophysics Data System (ADS)

Raskoff, K. A.; Hopcroft, R. R.; Kosobokova, K. N.; Purcell, J. E.; Youngbluth, M.

2010-01-01

In order to provide a baseline understanding of gelatinous zooplankton biodiversity and distribution in the rapidly changing Arctic Ocean, 12 stations were sampled across the Canada Basin, Northwind Ridge, and Chukchi Plateau with detailed deep-water ROV observations and multinet tows down to 3000 m. The complex, multi-origin water layers of the Arctic Ocean provided the backdrop for examining the vertical and horizontal distributions of the poorly understood meso and bathypelagic gelatinous taxa. Over 50 different gelatinous taxa were observed across the stations, with cnidarians being the most common group. Medusae accounted for 60% of all observations, siphonophores for 24%, larvaceans for 10%, ctenophores for 5%, and numerous interesting and rarer taxa constituted the remaining 1% of observations. Several new species were found and many major range extensions were observed. Both the vertical and horizontal distribution of species appear to be linked to water mass characteristics, as well as bottom topography and geographic location within the study area. Shallow slope and ridge areas around the Canada Basin and Chukchi Plateau appear to harbor substantially lower gelatinous zooplankton biomass and diversity than the deeper locations. Shallow stations not only show reduced abundance, but also different relative abundance of the major taxa, where the shallow water stations are dominated by large numbers of siphonophores and ctenophores, the deep stations are dominated by medusae. Taxonomic issues and ecological observations of several important species are discussed, aided by the live collection of many undamaged and fragile species.

Observations and laboratory simulations of tornadoes in complex topographical regions

NASA Astrophysics Data System (ADS)

Karstens, Christopher Daniel

Aerial photos taken along the damage paths of the Joplin, MO, and Tuscaloosa-Birmingham, AL, tornadoes of 2011 captured and preserved several unique patterns of damage. In particular, a few distinct tree-fall patterns were noted along the Tuscaloosa-Birmingham tornado track that appeared highly influenced by the underlying topography. One such region was the focus of a damage survey and motivated laboratory vortex simulations with a 3-D foam representation of the underlying topography, in addition to simulations performed with idealized 2D topographic features, using Iowa State University's tornado simulator. The purpose of this dissertation is to explore various aspects related to the interaction of a tornado or a tornado-like vortex with its underlying topography. Three topics are examined: 1) Analysis of tornado-induced tree-fall using aerial photography from the Joplin, MO, and Tuscaloosa-Birmingham, AL, tornadoes of 2011, 2) Laboratory investigation of topographical influences on a simulated tornado-like vortex, and 3) On the use of non-standard EF-scale damage indicators to categorize tornadoes.

Multiscale analysis of replication technique efficiency for 3D roughness characterization of manufactured surfaces

NASA Astrophysics Data System (ADS)

Jolivet, S.; Mezghani, S.; El Mansori, M.

2016-09-01

The replication of topography has been generally restricted to optimizing material processing technologies in terms of statistical and single-scale features such as roughness. By contrast, manufactured surface topography is highly complex, irregular, and multiscale. In this work, we have demonstrated the use of multiscale analysis on replicates of surface finish to assess the precise control of the finished replica. Five commercial resins used for surface replication were compared. The topography of five standard surfaces representative of common finishing processes were acquired both directly and by a replication technique. Then, they were characterized using the ISO 25178 standard and multiscale decomposition based on a continuous wavelet transform, to compare the roughness transfer quality at different scales. Additionally, atomic force microscope force modulation mode was used in order to compare the resins’ stiffness properties. The results showed that less stiff resins are able to replicate the surface finish along a larger wavelength band. The method was then tested for non-destructive quality control of automotive gear tooth surfaces.

Bottom-up vs. top-down effects on terrestrial insect herbivores: a meta-analysis.

PubMed

Vidal, Mayra C; Murphy, Shannon M

2018-01-01

Primary consumers are under strong selection from resource ('bottom-up') and consumer ('top-down') controls, but the relative importance of these selective forces is unknown. We performed a meta-analysis to compare the strength of top-down and bottom-up forces on consumer fitness, considering multiple predictors that can modulate these effects: diet breadth, feeding guild, habitat/environment, type of bottom-up effects, type of top-down effects and how consumer fitness effects are measured. We focused our analyses on the most diverse group of primary consumers, herbivorous insects, and found that in general top-down forces were stronger than bottom-up forces. Notably, chewing, sucking and gall-making herbivores were more affected by top-down than bottom-up forces, top-down forces were stronger than bottom-up in both natural and controlled (cultivated) environments, and parasitoids and predators had equally strong top-down effects on insect herbivores. Future studies should broaden the scope of focal consumers, particularly in understudied terrestrial systems, guilds, taxonomic groups and top-down controls (e.g. pathogens), and test for more complex indirect community interactions. Our results demonstrate the surprising strength of forces exerted by natural enemies on herbivorous insects, and thus the necessity of using a tri-trophic approach when studying insect-plant interactions. © 2017 John Wiley & Sons Ltd/CNRS.

Impact of lithosphere rheology on the dynamic topography

NASA Astrophysics Data System (ADS)

Burov, Evgueni; Gerya, Taras; Koptev, Alexander

2014-05-01

Dynamic topography is a key observable signature of the Earth's and planetary (e.g. Venus) mantle dynamics. In general view, it reflects complex mantle flow patterns, and hence is supposed to correlate at different extent with seismic tomography, SKS fast orientations, geodetic velocity fields and geoid anomalies. However, identification of dynamic topography had no systematic success, specifically in the Earth's continents. Here we argue that lithosphere rheology, in particular, rheological stratification of continents, results in modulation of dynamic topography, converting commonly expected long-wavelength/small amplitude undulations into short-wavelength surface undulations with wide amplitude spectrum, superimposed onto "tectonic" topography. These ideas are explored in 3D using unprecedentedly high resolution numerical experiments (grid step size 2-3 km for 1500x1500x600 km computational area) incorporating realistic rheologically stratified lithosphere. Such high resolution is actually needed to resolve small-scale crustal faulting and inter-layer coupling/uncoupling that shape surface topography. The results reveal strikingly discordant, counterintuitive features of 3D dynamic topography, going far beyond the inferences from previous models. In particular, even weak anisotropic tectonic stress field results both in large-scale small-amplitude dynamic topography and in strongly anisotropic short-wavelength (at least in one direction) dynamic topography with wide amplitude range (from 100 to 2000-3000 m), including basins and ranges and large-scale linear normal and strike-slip faults. Even very slightly pre-stressed strong lithosphere yields and localizes deformation much easier , than un-prestressed one, in response to plume impact and mantle flow. The results shed new light on the importance of lithosphere rheology and active role of lithosphere in mantle-lithosphere interactions as well as on the role of mantle flow and far-field stresses in tectonic-scale deformation. We show, for example, that crustal fault patterns initiated by plume impact are rapidly re-organized in sub-linear rifts and spreading centers, which orientation is largely dictated (e.g., perpendicular to) by the direction of the tectonic far-field stress field, as well as the plume-head material soon starts to flow along the sub-linear rifted shear zones in crustal and mantle lithosphere further amplifying their development. The final surface deformation and mantle flow patterns rapidly loose the initial axisymmetric character and take elongated sub-linear shapes whereas brittle deformation at surface is amplified and stabilized by coherent flow of mantle/plume-head material from below. These "tectonically" looking dynamic topography patterns are quite different from those expected from conventional models as well as from those directly observed, for example, on Venus where plume-lithosphere interactions produce only axisymmetric coronae domal-shaped features with radiating extensional rifts, suggesting that the Venusian lithosphere is rheologically too weak , and its crust is too thin, to produce any significant impact on the dynamic topography.

Inverse algorithms for 2D shallow water equations in presence of wet dry fronts: Application to flood plain dynamics

NASA Astrophysics Data System (ADS)

Monnier, J.; Couderc, F.; Dartus, D.; Larnier, K.; Madec, R.; Vila, J.-P.

2016-11-01

The 2D shallow water equations adequately model some geophysical flows with wet-dry fronts (e.g. flood plain or tidal flows); nevertheless deriving accurate, robust and conservative numerical schemes for dynamic wet-dry fronts over complex topographies remains a challenge. Furthermore for these flows, data are generally complex, multi-scale and uncertain. Robust variational inverse algorithms, providing sensitivity maps and data assimilation processes may contribute to breakthrough shallow wet-dry front dynamics modelling. The present study aims at deriving an accurate, positive and stable finite volume scheme in presence of dynamic wet-dry fronts, and some corresponding inverse computational algorithms (variational approach). The schemes and algorithms are assessed on classical and original benchmarks plus a real flood plain test case (Lèze river, France). Original sensitivity maps with respect to the (friction, topography) pair are performed and discussed. The identification of inflow discharges (time series) or friction coefficients (spatially distributed parameters) demonstrate the algorithms efficiency.

EEG based topography analysis in string recognition task

NASA Astrophysics Data System (ADS)

Ma, Xiaofei; Huang, Xiaolin; Shen, Yuxiaotong; Qin, Zike; Ge, Yun; Chen, Ying; Ning, Xinbao

2017-03-01

Vision perception and recognition is a complex process, during which different parts of brain are involved depending on the specific modality of the vision target, e.g. face, character, or word. In this study, brain activities in string recognition task compared with idle control state are analyzed through topographies based on multiple measurements, i.e. sample entropy, symbolic sample entropy and normalized rhythm power, extracted from simultaneously collected scalp EEG. Our analyses show that, for most subjects, both symbolic sample entropy and normalized gamma power in string recognition task are significantly higher than those in idle state, especially at locations of P4, O2, T6 and C4. It implies that these regions are highly involved in string recognition task. Since symbolic sample entropy measures complexity, from the perspective of new information generation, and normalized rhythm power reveals the power distributions in frequency domain, complementary information about the underlying dynamics can be provided through the two types of indices.

Atmospheric dispersion modelling over complex terrain at small scale

NASA Astrophysics Data System (ADS)

Nosek, S.; Janour, Z.; Kukacka, L.; Jurcakova, K.; Kellnerova, R.; Gulikova, E.

2014-03-01

Previous study concerned of qualitative modelling neutrally stratified flow over open-cut coal mine and important surrounding topography at meso-scale (1:9000) revealed an important area for quantitative modelling of atmospheric dispersion at small-scale (1:3300). The selected area includes a necessary part of the coal mine topography with respect to its future expansion and surrounding populated areas. At this small-scale simultaneous measurement of velocity components and concentrations in specified points of vertical and horizontal planes were performed by two-dimensional Laser Doppler Anemometry (LDA) and Fast-Response Flame Ionization Detector (FFID), respectively. The impact of the complex terrain on passive pollutant dispersion with respect to the prevailing wind direction was observed and the prediction of the air quality at populated areas is discussed. The measured data will be used for comparison with another model taking into account the future coal mine transformation. Thus, the impact of coal mine transformation on pollutant dispersion can be observed.

Accurate reconstruction in digital holographic microscopy using Fresnel dual-tree complex wavelet transform

NASA Astrophysics Data System (ADS)

Zhang, Xiaolei; Zhang, Xiangchao; Yuan, He; Zhang, Hao; Xu, Min

2018-02-01

Digital holography is a promising measurement method in the fields of bio-medicine and micro-electronics. But the captured images of digital holography are severely polluted by the speckle noise because of optical scattering and diffraction. Via analyzing the properties of Fresnel diffraction and the topographies of micro-structures, a novel reconstruction method based on the dual-tree complex wavelet transform (DT-CWT) is proposed. This algorithm is shiftinvariant and capable of obtaining sparse representations for the diffracted signals of salient features, thus it is well suited for multiresolution processing of the interferometric holograms of directional morphologies. An explicit representation of orthogonal Fresnel DT-CWT bases and a specific filtering method are developed. This method can effectively remove the speckle noise without destroying the salient features. Finally, the proposed reconstruction method is compared with the conventional Fresnel diffraction integration and Fresnel wavelet transform with compressive sensing methods to validate its remarkable superiority on the aspects of topography reconstruction and speckle removal.

Constant-Distance Mode Nanospray Desorption Electrospray Ionization Mass Spectrometry Imaging of Biological Samples with Complex Topography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nguyen, Son N.; Liyu, Andrey V.; Chu, Rosalie K.

A new approach for constant distance mode mass spectrometry imaging of biological samples using nanospray desorption electrospray ionization (nano-DESI MSI) was developed by integrating a shear-force probe with nano-DESI probe. The technical concept and basic instrumental setup as well as general operation of the system are described. Mechanical dampening of resonant oscillations due to the presence of shear forces between the probe and the sample surface enables constant-distance imaging mode via a computer controlled closed feedback loop. The capability of simultaneous chemical and topographic imaging of complex biological samples is demonstrated using living Bacillus Subtilis ATCC 49760 colonies on agarmore » plates. The constant-distance mode nano-DESI MSI enabled imaging of many metabolites including non-ribosomal peptides (surfactin, plipastatin and iturin) and iron-bound heme on the surface of living bacterial colonies ranging in diameter from 10 mm to 13 mm with height variations of up to 0.8 mm above the agar plate. Co-registration of ion images to topographic images provided higher-contrast images. Constant-mode nano-DESI MSI is ideally suited for imaging biological samples of complex topography in their native state.« less

Analysis of Alaskan burn severity patterns using remotely sensed data

USGS Publications Warehouse

Duffy, P.A.; Epting, J.; Graham, J.M.; Rupp, T.S.; McGuire, A.D.

2007-01-01

Wildland fire is the dominant large-scale disturbance mechanism in the Alaskan boreal forest, and it strongly influences forest structure and function. In this research, patterns of burn severity in the Alaskan boreal forest are characterised using 24 fires. First, the relationship between burn severity and area burned is quantified using a linear regression. Second, the spatial correlation of burn severity as a function of topography is modelled using a variogram analysis. Finally, the relationship between vegetation type and spatial patterns of burn severity is quantified using linear models where variograms account for spatial correlation. These results show that: 1) average burn severity increases with the natural logarithm of the area of the wildfire, 2) burn severity is more variable in topographically complex landscapes than in flat landscapes, and 3) there is a significant relationship between burn severity and vegetation type in flat landscapes but not in topographically complex landscapes. These results strengthen the argument that differential flammability of vegetation exists in some boreal landscapes of Alaska. Additionally, these results suggest that through feedbacks between vegetation and burn severity, the distribution of forest vegetation through time is likely more stable in flat terrain than it is in areas with more complex topography. ?? IAWF 2007.

Mapping the Forest Type and Land Cover of Puerto Rico, a Component of the Caribbean Biodiversity Hotspot

Treesearch

Eileen Helmer; Olga Ramos; T. DEL M. LÓPEZ; Maya Quinones; W. DIAZ

2002-01-01

The Caribbean is one of the world’s centers of biodiversity and endemism. As in similar regions, many of its islands have complex topography, climate and soils, and ecological zones change over small areas. A segmented, supervised classification approach using Landsat TM imagery enabled us to develop the most detailed island-wide map of Puerto Rico’s extremely complex...

Effects of topography on simulated net primary productivity at landscape scale.

PubMed

Chen, X F; Chen, J M; An, S Q; Ju, W M

2007-11-01

Local topography significantly affects spatial variations of climatic variables and soil water movement in complex terrain. Therefore, the distribution and productivity of ecosystems are closely linked to topography. Using a coupled terrestrial carbon and hydrological model (BEPS-TerrainLab model), the topographic effects on the net primary productivity (NPP) are analyzed through four modelling experiments for a 5700 km(2) area in Baohe River basin, Shaanxi Province, northwest of China. The model was able to capture 81% of the variability in NPP estimated from tree rings, with a mean relative error of 3.1%. The average NPP in 2003 for the study area was 741 gCm(-2)yr(-1) from a model run including topographic effects on the distributions of climate variables and lateral flow of ground water. Topography has considerable effect on NPP, which peaks near 1350 m above the sea level. An elevation increase of 100 m above this level reduces the average annual NPP by about 25 gCm(-2). The terrain aspect gives rise to a NPP change of 5% for forests located below 1900 m as a result of its influence on incident solar radiation. For the whole study area, a simulation totally excluding topographic effects on the distributions of climatic variables and ground water movement overestimated the average NPP by 5%.

Sub-glacier ocean properties and mass balance estimates of Petermann Gletscher's floating tongue in Northwestern Greenland

NASA Astrophysics Data System (ADS)

Steffen, K.; Huff, R. D.; Cullen, N.; Rignot, E.; Bauder, A.

2004-12-01

Petermann Gletscher is the largest and most influential outlet glacier in central northern Greenland. Located at 81 N, 60 W, it drains an area of 71,580 km2, with a discharge of 12 cubic km of ice per year into the Arctic Ocean. We finished a third field season in spring 2004 collecting in situ data on local climate, ice velocity, ice thickness profiles and bottom melt rates of the floating ice tongue. In addition, water properties (salinity and temperature profiles) in large, channel-like bottom cavities beneath the floating ice tongue were measured. The melt rates in these "channels" are in excess of 10 m/y and probably responsible for most of the mass loss of the Petermann Gletscher. The ocean measurements will be discussed in comparison with other ocean-profile soundings in the region. The bottom topography of the floating ice tongue has been mapped for some regions using surface-based ground penetrating radar at 25 MHz frequency and NASA aircraft radar profiles. A new map showing these under-ice features will be presented. GPS tidal motion has been measured over one lunar cycle at the flex zone and on the free floating ice tongue. These results will be compared to historic measurements made at the beginning of last century. A "worm-like" sheer feature of 80 m in height and several km in length has been studied using differential GPS readings. The mean velocity of the floating tongue ice is 1.08 km/y in that region, whereas the ice along the margin has a 30%-reduced flow speed, resulting in this strange looking sheer feature. Finally, the mass balance of the floating ice tongue will be discussed based on in situ measurements, aircraft profiles, satellite data, and model approximations.

Assimilation of altimeter data into a quasigeostrophic ocean model using optimal interpolation and eofs

NASA Astrophysics Data System (ADS)

Rienecker, M. M.; Adamec, D.

1995-01-01

An ensemble of fraternal-twin experiments is used to assess the utility of optimal interpolation and model-based vertical empirical orthogonal functions (eofs) of streamfunction variability to assimilate satellite altimeter data into ocean models. Simulated altimeter data are assimilated into a basin-wide 3-layer quasi-geostrophic model with a horizontal grid spacing of 15 km. The effects of bottom topography are included and the model is forced by a wind stress curl distribution which is constant in time. The simulated data are extracted, along altimeter tracks with spatial and temporal characteristics of Geosat, from a reference model ocean with a slightly different climatology from that generated by the model used for assimilation. The use of vertical eofs determined from the model-generated streamfunction variability is shown to be effective in aiding the model's dynamical extrapolation of the surface information throughout the rest of the water column. After a single repeat cycle (17 days), the analysis errors are reduced markedly from the initial level, by 52% in the surface layer, 41% in the second layer and 11% in the bottom layer. The largest differences between the assimilation analysis and the reference ocean are found in the nonlinear regime of the mid-latitude jet in all layers. After 100 days of assimilation, the error in the upper two layers has been reduced by over 50% and that in the bottom layer by 38%. The essence of the method is that the eofs capture the statistics of the dynamical balances in the model and ensure that this balance is not inappropriately disturbed during the assimilation process. This statistical balance includes any potential vorticity homogeneity which may be associated with the eddy stirring by mid-latitude surface jets.

Preliminary studies leading toward the development of a LIDAR bathymetry mapping instrument

NASA Astrophysics Data System (ADS)

Hill, John M.; Krenek, Brendan D.; Kunz, Terry D.; Krabill, William; Stetina, Fran

1993-02-01

The National Aeronautics and Space Administration (NASA) at Goddard Space Flight Center (GSFC) has developed a laser ranging device (LIDAR) which provides accurate and timely data of earth features. NASA/GSFC recently modified the sensor to include a scanning capability to produce LIDAR swaths. They have also integrated a Global Positioning System (GPS) and an Inertial Navigation System (INS) to accurately determine the absolute aircraft location and aircraft attitude (pitch, yaw, and roll), respectively. The sensor has been flown in research mode by NASA for many years. The LIDAR has been used in different configurations or modes to acquire such data as altimetry (topography), bathymetry (water depth), laser-induced fluorosensing (tracer dye movements, oil spills and oil thickness, chlorophyll and plant stress identification), forestry, and wetland discrimination studies. NASA and HARC are developing a commercial version of the instrument for topographic mapping applications. The next phase of the commercialization project will be to investigate other applications such as wetlands mapping and coastal bathymetry. In this paper we report on preliminary laboratory measurements to determine the feasibility of making accurate depth measurements in relatively shallow water (approximately 2 to 6 feet deep) using a LIDAR system. The LIDAR bathymetry measurements are relatively simple in theory. The water depth is determined by measuring the time interval between the water surface reflection and the bottom surface reflection signals. Depth is then calculated by dividing by the index of refraction of water. However, the measurements are somewhat complicated due to the convolution of the water surface return signal with the bottom surface return signal. Therefore in addition to the laboratory experiments, computer simulations of the data were made to show these convolution effects in the return pulse waveform due to: (1) water depth, and (2) changes in bottom surface reflectivity.

Preliminary Studies Leading Toward the Development of a LIDAR Bathymetry Mapping Instrument

NASA Technical Reports Server (NTRS)

Hill, John M.; Krenek, Brendan D.; Kunz, Terry D.; Krabill, William; Stetina, Fran

1993-01-01

The National Aeronautics and Space Administration (NASA) at Goddard Space Flight Center (GSFC) has developed a laser ranging device (LIDAR) which provides accurate and timely data of earth features. NASA/GSFC recently modified the sensor to include a scanning capability to produce LIDAR swaths. They have also integrated a Global Positioning System (GPS) and an Inertial Navigation System (INS) to accurately determine the absolute aircraft location and aircraft attitude (pitch, yaw, and roll), respectively. The sensor has been flown in research mode by NASA for many years. The LIDAR has been used in different configurations or modes to acquire such data as altimetry (topography), bathymetry (water depth), laser-induced fluorosensing (tracer dye movements, oil spills and oil thickness, chlorophyll and plant stress identification), forestry, and wetland discrimination studies. NASA and HARC are developing a commercial version of the instrument for topographic mapping applications. The next phase of the commercialization project will be to investigate other applications such as wetlands mapping and coastal bathymetry. In this paper we report on preliminary laboratory measurements to determine the feasibility of making accurate depth measurements in relatively shallow water (approximately 2 to 6 feet deep) using a LIDAR system. The LIDAR bathymetry measurements are relatively simple in theory. The water depth is determined by measuring the time interval between the water surface reflection and the bottom surface reflection signals. Depth is then calculated by dividing by the index of refraction of water. However, the measurements are somewhat complicated due to the convolution of the water surface return signal with the bottom surface return signal. Therefore in addition to the laboratory experiments, computer simulations of the data were made to show these convolution effects in the return pulse waveform due to: (1) water depth, and (2) changes in bottom surface reflectivity.

Estimating lithospheric properties at Atla Regio, Venus

NASA Technical Reports Server (NTRS)

Phillips, Roger J.

1994-01-01

Magellan spehrical harmonic gravity and topography models are used to estimate lithospheric properties at Alta Regio, Venus, a proposed hotspot with dynamic support from mantle plume(s). Global spherical harmonic and local representations of the gravity field share common properties in the Atla region interms of their spectral behavior over a wavelength band from approximately 2100 to approximately 700 km. The estimated free-air admittance spectrum displays a rather featureless long-wavelength portion followed by a sharp rise at wavelengths shorter than about 1000 km. This sharp rise requires significant flexural support of short-wavelength structures. The Bouguer coherence also displays a sharp drop in this wavelength band, indicating a finite flexural rigidity of the lithosphere. A simple model for lithospheric loading from above and below is introduced (D. W. Forsyth, 1985) with four parameters: f, the ratio of bottom loading to top loading; z(sub m), crustal thickness; z(sub l) depth to bottom loading source; and T(sub e) elastic lithosphere thickness. A dual-mode compensation model is introduced in which the shorter wavelengths (lambda approximately less than 1000 km) might be explained best by a predominance of top loading by the large shield volcanoes Maat Mons, Ozza Mons, and Sapas Mons, and the longer wavelengths (lambda approximately greater than 1500 km) might be explained best by a deep depth of compensation, possibly representing bottom loading by a dynamic source. A Monte Carlo inversion technique is introduced to thoroughly search out the four-space of the model parameters and to examine parameter correlation in the solutions. Venus either is a considerabe deficient in heat sources relative to Earth, or the thermal lithosphere is overthickened in response to an earlier episode of significant heat loss from the planet.

Digital shaded relief image of a carbonate platform (northern Great Bahama Bank): Scenery seen and unseen

NASA Astrophysics Data System (ADS)

Boss, Stephen K.

1996-11-01

A mosaic image of the northern Great Bahama Bank was created from separate gray-scale Landsat images using photo-editing and image analysis software that is commercially available for desktop computers. Measurements of pixel gray levels (relative scale from 0 to 255 referred to as digital number, DN) on the mosaic image were compared to bank-top bathymetry (determined from a network of single-channel, high-resolution seismic profiles), bottom type (coarse sand, sandy mud, barren rock, or reef determined from seismic profiles and diver observations), and vegetative cover (presence and/or absence and relative density of the marine angiosperm Thalassia testudinum determined from diver observations). Results of these analyses indicate that bank-top bathymetry is a primary control on observed pixel DN, bottom type is a secondary control on pixel DN, and vegetative cover is a tertiary influence on pixel DN. Consequently, processing of the gray-scale Landsat mosaic with a directional gradient edge-detection filter generated a physiographic shaded relief image resembling bank-top bathymetric patterns related to submerged physiographic features across the platform. The visibility of submerged karst landforms, Pleistocene eolianite ridges, islands, and possible paleo-drainage patterns created during sea-level lowstands is significantly enhanced on processed images relative to the original mosaic. Bank-margin ooid shoals, platform interior sand bodies, reef edifices, and bidirectional sand waves are features resulting from Holocene carbonate deposition that are also more clearly visible on the new physiographic images. Combined with observational data (single-channel, high-resolution seismic profiles, bottom observations by SCUBA divers, sediment and rock cores) across the northern Great Bahama Bank, these physiographic images facilitate comprehension of areal relations among antecedent platform topography, physical processes, and ensuing depositional patterns during sea-level rise.

The incidence and treatment of rocker bottom deformity as a complication of the conservative treatment of idiopathic congenital clubfoot.

PubMed

Koureas, G; Rampal, V; Mascard, E; Seringe, R; Wicart, P

2008-01-01

Rocker bottom deformity may occur during the conservative treatment of idiopathic congenital clubfoot. Between 1975 and 1996, we treated 715 patients (1120 clubfeet) conservatively. A total of 23 patients (36 feet; 3.2%) developed a rocker bottom deformity. It is these patients that we have studied. The pathoanatomy of the rocker bottom deformity is characterised by a plantar convexity appearing between three and six months of age with the hindfoot equinus position remaining constant. The convexity initially involves the medial column, radiologically identified by the talo-first metatarsal angle and secondly by the lateral column, revealed radiologically as the calcaneo-fifth metatarsal angle. The apex of the deformity is usually at the midtrasal with a dorsal calcaneocuboid subluxation. Ideal management of clubfoot deformity should avoid this complication, with adequate manipulation and splinting and early Achilles' percutaneous tenotomy if plantar convexity occurs. Adequate soft-tissue release provides satisfactory correction for rocker bottom deformity. However, this deformity requires more extensive and complex procedures than the standard surgical treatment of clubfoot. The need for lateral radiographs to ensure that the rocker bottom deformity is recognised early, is demonstrated.

Internal wave mode resonant triads in an arbitrarly stratified finite-depth ocean with background rotation

NASA Astrophysics Data System (ADS)

Varma, Dheeraj; Mathur, Manikandan

2017-11-01

Internal tides generated by barotropic tides on bottom topography or the spatially compact near-inertial mixed layer currents excited by surface winds can be conveniently represented in the linear regime as a superposition of vertical modes at a given frequency in an arbitrarily stratified ocean of finite depth. Considering modes (m , n) at a frequency ω in the primary wave field, we derive the weakly nonlinear solution, which contains a secondary wave at 2 ω that diverges when it forms a resonant triad with the primary waves. In nonuniform stratifications, resonant triads are shown to occur when the horizontal component of the classical RTI criterion k->1 +k->2 +k->3 = 0 is satisfied along with a non-orthogonality criterion. In nonuniform stratifications with a pycnocline, infinitely more pairs of primary wave modes (m , n) result in RTI when compared to a uniform stratification. Further, two nearby high modes at around the near-inertial frequency often form a resonant triad with a low mode at 2 ω , reminiscent of the features of PSI near the critical latitude. The theoretical framework is then adapted to investigate RTI in two different scenarios: low-mode internal tide scattering over topography, and internal wave beams incident on a pycnocline. The authors thank the Ministry of Earth Sciences, Government of India for financial support under the Monsoon Mission Grant MM/2014/IND-002.

A gridded global data set of soil, intact regolith, and sedimentary deposit thicknesses for regional and global land surface modeling

DOE PAGES

Pelletier, Jon D.; Broxton, Patrick D.; Hazenberg, Pieter; ...

2016-01-22

Earth’s terrestrial near-subsurface environment can be divided into relatively porous layers of soil, intact regolith, and sedimentary deposits above unweathered bedrock. Variations in the thicknesses of these layers control the hydrologic and biogeochemical responses of landscapes. Currently, Earth System Models approximate the thickness of these relatively permeable layers above bedrock as uniform globally, despite the fact that their thicknesses vary systematically with topography, climate, and geology. To meet the need for more realistic input data for models, we developed a high-resolution gridded global data set of the average thicknesses of soil, intact regolith, and sedimentary deposits within each 30 arcsecmore » (~ 1 km) pixel using the best available data for topography, climate, and geology as input. Our data set partitions the global land surface into upland hillslope, upland valley bottom, and lowland landscape components and uses models optimized for each landform type to estimate the thicknesses of each subsurface layer. On hillslopes, the data set is calibrated and validated using independent data sets of measured soil thicknesses from the U.S. and Europe and on lowlands using depth to bedrock observations from groundwater wells in the U.S. As a result, we anticipate that the data set will prove useful as an input to regional and global hydrological and ecosystems models.« less

A gridded global data set of soil, intact regolith, and sedimentary deposit thicknesses for regional and global land surface modeling

NASA Astrophysics Data System (ADS)

Pelletier, Jon D.; Broxton, Patrick D.; Hazenberg, Pieter; Zeng, Xubin; Troch, Peter A.; Niu, Guo-Yue; Williams, Zachary; Brunke, Michael A.; Gochis, David

2016-03-01

Earth's terrestrial near-subsurface environment can be divided into relatively porous layers of soil, intact regolith, and sedimentary deposits above unweathered bedrock. Variations in the thicknesses of these layers control the hydrologic and biogeochemical responses of landscapes. Currently, Earth System Models approximate the thickness of these relatively permeable layers above bedrock as uniform globally, despite the fact that their thicknesses vary systematically with topography, climate, and geology. To meet the need for more realistic input data for models, we developed a high-resolution gridded global data set of the average thicknesses of soil, intact regolith, and sedimentary deposits within each 30 arcsec (˜1 km) pixel using the best available data for topography, climate, and geology as input. Our data set partitions the global land surface into upland hillslope, upland valley bottom, and lowland landscape components and uses models optimized for each landform type to estimate the thicknesses of each subsurface layer. On hillslopes, the data set is calibrated and validated using independent data sets of measured soil thicknesses from the U.S. and Europe and on lowlands using depth to bedrock observations from groundwater wells in the U.S. We anticipate that the data set will prove useful as an input to regional and global hydrological and ecosystems models. This article was corrected on 2 FEB 2016. See the end of the full text for details.

“Engineering Substrate Micro- and Nanotopography to Control Cell Function”

PubMed Central

Bettinger, Christopher J; Langer, Robert; Borenstein, Jeffrey T

2010-01-01

Lead-In The interaction of mammalian cells with nanoscale topography has proven to be an important signaling modality in controlling cell function. Naturally occurring nanotopographic structures within the extracellular matrix present surrounding cells with mechanotransductive cues that influence local migration, cell polarization, and other functions. Synthetically nanofabricated topography can also influence cell morphology, alignment, adhesion, migration, proliferation, and cytoskeleton organization. Here we review the use of in vitro synthetic cell-nanotopography interactions to control cell behavior and influence complex cellular processes including stem cell differentiation and tissue organization. Future challenges and opportunities in cell-nanotopography engineering will also be discussed including the elucidation of mechanisms and applications in tissue engineering. PMID:19492373

Roughness of stylolites: implications of 3D high resolution topography measurements.

PubMed

Schmittbuhl, J; Renard, F; Gratier, J P; Toussaint, R

2004-12-03

Stylolites are natural pressure-dissolution surfaces in sedimentary rocks. We present 3D high resolution measurements at laboratory scales of their complex roughness. The topography is shown to be described by a self-affine scaling invariance. At large scales, the Hurst exponent is zeta(1) approximately 0.5 and very different from that at small scales where zeta(2) approximately 1.2. A crossover length scale at around L(c)=1 mm is well characterized. Measurements are consistent with a Langevin equation that describes the growth of a stylolitic interface as a competition between stabilizing long range elastic interactions at large scales or local surface tension effects at small scales and a destabilizing quenched material disorder.

High-frequency fluctuations in Denmark Strait transport

NASA Astrophysics Data System (ADS)

Haine, T. W. N.

2010-07-01

Denmark Strait ocean current transport exhibits quasi-regular fluctuations immediately south of the sill with periods of 2-4 days. The transport variability is similar to the mean transport itself. Using a circulation model we explore prospects to monitor the fluctuations. The model has realistic transport and shows water leaving Denmark Strait in equivalent-barotropic cyclones that are nearly geostrophic and correlate with sea-surface height (SSH). Existing satellite altimeter observations of SSH have adequate space/time sampling to reconstruct the transport fluctuations using a regression developed from the model results, but measurement error overwhelms the signal. From the model results, the pending Surface Water and Ocean Topography (SWOT) wide-swath altimeter appears accurate enough, and with good-enough coverage, to allow the transport fluctuations to be reconstructed. Bottom pressure recorders at the exit of the Denmark Strait can also reproduce the transport variability.

Tunneling with a hydrodynamic pilot-wave model

NASA Astrophysics Data System (ADS)

Nachbin, André; Milewski, Paul A.; Bush, John W. M.

2017-03-01

Eddi et al. [Phys. Rev Lett. 102, 240401 (2009), 10.1103/PhysRevLett.102.240401] presented experimental results demonstrating the unpredictable tunneling of a classical wave-particle association as may arise when a droplet walking across the surface of a vibrating fluid bath approaches a submerged barrier. We here present a theoretical model that captures the influence of bottom topography on this wave-particle association and so enables us to investigate its interaction with barriers. The coupled wave-droplet dynamics results in unpredictable tunneling events. As reported in the experiments by Eddi et al. and as is the case in quantum tunneling [Gamow, Nature (London) 122, 805 (1928), 10.1038/122805b0], the predicted tunneling probability decreases exponentially with increasing barrier width. In the parameter regimes examined, tunneling between two cavities suggests an underlying stationary ergodic process for the droplet's position.

A systematic analysis of directional site effects at stations of the Italian Seismic Network to test the role of local topography

NASA Astrophysics Data System (ADS)

Pischiutta, Marta; Cianfarra, Paola; Salvini, Francesco; Cara, Fabrizio; Vannoli, Paola

2018-03-01

Directional site effects observed at seismological stations on pronounced relief are analyzed. We investigate the ground motion properties calculating horizontal-to-vertical spectral ratios and horizontal polarization of both ambient vibrations and earthquake records using broadband seismograms of the Italian Seismic Network. We find that a subset of 47 stations with pronounced relief, results in a significant (>2) directional amplification of the horizontal component, with a well defined, site-specific direction of motion. However, the horizontal spectral response of sites is not uniform, varying from an isolated (resonant) frequency peak to a broadband amplification, interesting frequency bands as large as 1-10 Hz in many cases. Using the 47 selected stations, we have tried to establish a relation between directional amplification and topography geometry in a 2D-vision, when applicable, through a morphological analysis of the Digital Elevation Model using Geographic Information Systems. The procedure computes the parameters that characterize the geometry of topographic irregularities (size and slope), in combination with a principal component analysis that automatically yields the orientation of the elongated ridges. In seeking a relation between directional amplification and the surface morphology, we have found that it is impossible to fit the variety of observations with a resonant topography model as well as to identify common features in the ground motion behavior for stations with similar topography typologies. We conclude that, rather than the shape of the topography, local structural complexities and details of the near-surface structure must play a predominant role in controlling ground motion properties at sites with pronounced relief.

A systematic analysis of directional site effects at stations of the Italian seismic network to test the role of local topography

NASA Astrophysics Data System (ADS)

Pischiutta, Marta; Cianfarra, Paola; Salvini, Francesco; Cara, Fabrizio; Vannoli, Paola

2018-07-01

Directional site effects observed at seismological stations on pronounced relief are analysed. We investigate the ground motion properties calculating horizontal-to-vertical spectral ratios and horizontal polarization of both ambient vibrations and earthquake records using broad-band seismograms of the Italian seismic network. We find that a subset of 47 stations with pronounced relief results in a significant (>2) directional amplification of the horizontal component, with a well-defined, site-specific direction of motion. However, the horizontal spectral response of sites is not uniform, varying from an isolated (resonant) frequency peak to a broad-band amplification, interesting frequency bands as large as 1-10 Hz in many cases. Using 47 selected stations, we have tried to establish a relation between directional amplification and topography geometry in a 2-D vision, when applicable, through a morphological analysis of the digital elevation model using geographic information systems. The procedure computes the parameters that characterize the geometry of topographic irregularities (size and slope), in combination with a principal component analysis that automatically yields the orientation of the elongated ridges. In seeking a relation between directional amplification and the surface morphology, we have found that it is impossible to fit the variety of observations with a resonant topography model as well as to identify common features in the ground motion behaviour for stations with similar topography typologies. We conclude that, rather than the shape of the topography, local structural complexities and details of the near-surface structure must play a predominant role in controlling ground motion properties at sites with pronounced relief.

The organization of the human cerebellum estimated by intrinsic functional connectivity

PubMed Central

Krienen, Fenna M.; Castellanos, Angela; Diaz, Julio C.; Yeo, B. T. Thomas

2011-01-01

The cerebral cortex communicates with the cerebellum via polysynaptic circuits. Separate regions of the cerebellum are connected to distinct cerebral areas, forming a complex topography. In this study we explored the organization of cerebrocerebellar circuits in the human using resting-state functional connectivity MRI (fcMRI). Data from 1,000 subjects were registered using nonlinear deformation of the cerebellum in combination with surface-based alignment of the cerebral cortex. The foot, hand, and tongue representations were localized in subjects performing movements. fcMRI maps derived from seed regions placed in different parts of the motor body representation yielded the expected inverted map of somatomotor topography in the anterior lobe and the upright map in the posterior lobe. Next, we mapped the complete topography of the cerebellum by estimating the principal cerebral target for each point in the cerebellum in a discovery sample of 500 subjects and replicated the topography in 500 independent subjects. The majority of the human cerebellum maps to association areas. Quantitative analysis of 17 distinct cerebral networks revealed that the extent of the cerebellum dedicated to each network is proportional to the network's extent in the cerebrum with a few exceptions, including primary visual cortex, which is not represented in the cerebellum. Like somatomotor representations, cerebellar regions linked to association cortex have separate anterior and posterior representations that are oriented as mirror images of one another. The orderly topography of the representations suggests that the cerebellum possesses at least two large, homotopic maps of the full cerebrum and possibly a smaller third map. PMID:21795627

Observations and simulations of the bottom nepheloid layer in the Lafourche Trough, Louisiana Continental Shelf

NASA Astrophysics Data System (ADS)

Jolliff, J.; Jarosz, E.; Penko, A.; Smith, T.

2017-12-01

The "Lafourche Trough" is a mud/silt -dominated, elongate seafloor depression located between transgressive sandy shoals approximately 50 km south of Cocodrie, Louisiana. These irregular bathymetric features are relicts of the abandoned Lafourche delta complex that still have an impact upon coupled sediment-hydrodynamic processes occurring today. Repeated optical and physical oceanographic surveys conducted during the spring of 2015 and winter 2017 reveal persistent bottom nepheloid layers (BNLs) characterized by extreme optical turbidity (beam attenuation 10 m-1, 532 nm). The manifestation and persistence of cohesive sediment BNLs in this area appears to result from a complex interplay between tidal currents, bathymetry, and frontal dynamics along the edge of the Mississippi River plume. Numerical experiments were performed using the Coupled Ocean Atmosphere Mesoscale Prediction System (COAMPS), an integrated air-sea-wave operational forecasting tool, that includes a simplified numerical sediment resuspension and transport scheme in order to simulate the nepheloid layer observations through the trough. The model results suggest that the wave-current bottom boundary layer is a critical factor in BNL development, and thusly, without wave model integration into COAMPS the system struggles to replicate the observations. Future modeling work will need to explore the potential suppression of physical mixing due to density perturbations along the BNL to fluid mud continuum within the bottom boundary layer.

Topography alters tree growth–climate relationships in a semi-arid forested catchment

DOE PAGES

Adams, Hallie R.; Barnard, Holly R.; Loomis, Alexander K.

2014-11-26

Topography and climate play an integral role in the spatial variability and annual dynamics of aboveground carbon sequestration. Despite knowledge of vegetation–climate–topography relationships on the landscape and hillslope scales, little is known about the influence of complex terrain coupled with hydrologic and topoclimatic variation on tree growth and physiology at the catchment scale. Climate change predictions for the semi-arid, western United States include increased temperatures, more frequent and extreme drought events, and decreases in snowpack, all of which put forests at risk of drought induced mortality and enhanced susceptibility to disturbance events. In this study, we determine how species-specific treemore » growth patterns and water use efficiency respond to interannual climate variability and how this response varies with topographic position. We found that Pinus contorta and Pinus ponderosa both show significant decreases in growth with water-limiting climate conditions, but complex terrain mediates this response by controlling moisture conditions in variable topoclimates. Foliar carbon isotope analyses show increased water use efficiency during drought for Pinus contorta, but indicate no significant difference in water use efficiency of Pinus ponderosa between a drought year and a non-drought year. The responses of the two pine species to climate indicate that semi-arid forests are especially susceptible to changes and risks posed by climate change and that topographic variability will likely play a significant role in determining the future vegetation patterns of semi-arid systems.« less

Expected Performance of the Upcoming Surface Water and Ocean Topography Mission Measurements of River Height, Width, and Slope

NASA Astrophysics Data System (ADS)

Wei, R.; Frasson, R. P. M.; Williams, B. A.; Rodriguez, E.; Pavelsky, T.; Altenau, E. H.; Durand, M. T.

2017-12-01

The upcoming Surface Water and Ocean Topography (SWOT) mission will measure river widths and water surface elevations of rivers wider than 100 m. In preparation for the SWOT mission, the Jet Propulsion Laboratory built the SWOT hydrology simulator with the intent of generating synthetic SWOT overpasses over rivers with realistic error characteristics. These synthetic overpasses can be used to guide the design of processing methods and data products, as well as develop data assimilation techniques that will incorporate the future SWOT data into hydraulic and hydrologic models as soon as the satellite becomes operational. SWOT simulator uses as inputs water depth, river bathymetry, and the surrounding terrain digital elevation model to create simulated interferograms of the study area. Next, the simulator emulates the anticipated processing of SWOT data by attempting to geolocate and classify the radar returns. The resulting cloud of points include information on water surface elevation, pixel area, and surface classification (land vs water). Finally, we process the pixel clouds by grouping pixels into equally spaced nodes located at the river centerline. This study applies the SWOT simulator to six different rivers: Sacramento River, Tanana River, Saint Lawrence River, Platte River, Po River, and Amazon River. This collection of rivers covers a range of size, slope, and planform complexity with the intent of evaluating the impact of river width, slope, planform complexity, and surrounding topography on the anticipated SWOT height, width, and slope error characteristics.

The Influence of Inherited Topography and/or Tectonics on Paleo-channel Systems and Incised Valleys Offshore of South Carolina

NASA Astrophysics Data System (ADS)

Long, A. M.; Hill, J. C.

2016-12-01

The Quaternary paleo-channel and incised valley systems of the Southeastern United States have been well documented onshore; however, few studies have focused on the positions and fill histories of these systems on the continental shelf. The effects of inherited topography can be studied through the integration of seismo-acoustic and core data. Existing offshore datasets have been used to document underlying structural and stratigraphic fabrics deeper than the Quaternary in the sedimentary record. By integrating these results with the published tectonic setting and onshore interpretations, some of the controls on paleo-channel/incised valley positions can be inferred. Preliminary results suggest the stress caused by the uplift along the Cape Fear Arch has been accommodated by shallow folding and reactivation of deeper structures in the South Carolina offshore province. The resultant topography may have dictated both the position and geometry of the fluvial incisions across the shelf. This in turn influences the accommodation space available to be filled in as sea level fluctuates. The depositional facies within the paleo-channel and incised valley range from single, uninterrupted fill to complex and repeated scour and fill with at least four different episodes of erosion and deposition. The observations and interpretations proposed here are the first steps in unraveling the complex interplay between sea level, climate, and tectonic changes on the morphology and stratigraphy of incised valleys and paleo-channels observed offshore of South Carolina.

Does Dynamical Downscaling Introduce Novel Information in Climate Model Simulations of Recipitation Change over a Complex Topography Region?

NASA Technical Reports Server (NTRS)

Tselioudis, George; Douvis, Costas; Zerefos, Christos

2012-01-01

Current climate and future climate-warming runs with the RegCM Regional Climate Model (RCM) at 50 and 11 km-resolutions forced by the ECHAM GCM are used to examine whether the increased resolution of the RCM introduces novel information in the precipitation field when the models are run for the mountainous region of the Hellenic peninsula. The model results are inter-compared with the resolution of the RCM output degraded to match that of the GCM, and it is found that in both the present and future climate runs the regional models produce more precipitation than the forcing GCM. At the same time, the RCM runs produce increases in precipitation with climate warming even though they are forced with a GCM that shows no precipitation change in the region. The additional precipitation is mostly concentrated over the mountain ranges, where orographic precipitation formation is expected to be a dominant mechanism. It is found that, when examined at the same resolution, the elevation heights of the GCM are lower than those of the averaged RCM in the areas of the main mountain ranges. It is also found that the majority of the difference in precipitation between the RCM and the GCM can be explained by their difference in topographic height. The study results indicate that, in complex topography regions, GCM predictions of precipitation change with climate warming may be dry biased due to the GCM smoothing of the regional topography.

STURM: Resuspension mesocosms with realistic bottom shear stress and water column turbulence for benthic-pelagic coupling studies: Design and Applications

NASA Astrophysics Data System (ADS)

Sanford, L. P.; Porter, E.; Porter, F. S.; Mason, R. P.

2016-02-01

Shear TUrbulence Resuspension Mesocosm (STURM) tanks, with high instantaneous bottom shear stress and realistic water column mixing in a single system, allow more realistic benthic-pelagic coupling studies that include sediment resuspension. The 1 m3 tanks can be programmed to produce tidal or episodic sediment resuspension over extended time periods (e.g. 4 weeks), over muddy sediments with or without infaunal organisms. The STURM tanks use a resuspension paddle that produces uniform bottom shear stress across the sediment surface while gently mixing a 1 m deep overlying water column. The STURM tanks can be programmed to different magnitudes, frequencies, and durations of bottom shear stress (and thus resuspension) with proportional water column turbulence levels over a wide range of mixing settings for benthic-pelagic coupling experiments. Over eight STURM calibration settings, turbulence intensity ranged from 0.55 to 4.52 cm s-1, energy dissipation rate from 0.0032 to 2.65 cm2 s-3, the average bottom shear stress from 0.0068 to 0.19 Pa, and the instantaneous bottom shear stress from 0.07 to 2.0 Pa. Mixing settings can be chosen as desired and/or varied over the experiment, based on the scientific question at hand. We have used the STURM tanks for four 4-week benthic-pelagic coupling ecosystem experiments with tidal resuspension with or without infaunal bivalves, for stepwise erosion experiments with and without infaunal bivalves, for experiments on oyster biodeposit resuspension, to mimic storms overlain on tidal resuspension, and for experiments on the effects of varying frequency and duration of resuspension on the release of sedimentary contaminants. The large size of the tanks allows water quality and particle measurements using standard oceanographic instrumentation. The realistic scale and complexity of the contained ecosystems has revealed indirect feedbacks and responses that are not observable in smaller, less complex experimental systems.

Effects of Fault Segmentation, Mechanical Interaction, and Structural Complexity on Earthquake-Generated Deformation

ERIC Educational Resources Information Center

Haddad, David Elias

2014-01-01

Earth's topographic surface forms an interface across which the geodynamic and geomorphic engines interact. This interaction is best observed along crustal margins where topography is created by active faulting and sculpted by geomorphic processes. Crustal deformation manifests as earthquakes at centennial to millennial timescales. Given that…

A Framework for Understanding and Assessing Systemic Change.

ERIC Educational Resources Information Center

Anderson, Beverly L.

The education system, like most organizational structures, needs fundamental changes to keep pace with the social and economic conditions of an increasingly complex global society. Taking an aerial view, this paper describes the topography of systemic change to provide multiple stakeholders a better vantage point for communicating and making…

Contribution of 3D inversion of Electrical Resistivity Tomography data applied to volcanic structures

NASA Astrophysics Data System (ADS)

Portal, Angélie; Fargier, Yannick; Lénat, Jean-François; Labazuy, Philippe

2016-04-01

The electrical resistivity tomography (ERT) method, initially developed for environmental and engineering exploration, is now commonly used for geological structures imaging. Such structures can present complex characteristics that conventional 2D inversion processes cannot perfectly integrate. Here we present a new 3D inversion algorithm named EResI, firstly developed for levee investigation, and presently applied to the study of a complex lava dome (the Puy de Dôme volcano, France). EResI algorithm is based on a conventional regularized Gauss-Newton inversion scheme and a 3D non-structured discretization of the model (double grid method based on tetrahedrons). This discretization allows to accurately model the topography of investigated structure (without a mesh deformation procedure) and also permits a precise location of the electrodes. Moreover, we demonstrate that a complete 3D unstructured discretization limits the number of inversion cells and is better adapted to the resolution capacity of tomography than a structured discretization. This study shows that a 3D inversion with a non-structured parametrization has some advantages compared to classical 2D inversions. The first advantage comes from the fact that a 2D inversion leads to artefacts due to 3D effects (3D topography, 3D internal resistivity). The second advantage comes from the fact that the capacity to experimentally align electrodes along an axis (for 2D surveys) depends on the constrains on the field (topography...). In this case, a 2D assumption induced by 2.5D inversion software prevents its capacity to model electrodes outside this axis leading to artefacts in the inversion result. The last limitation comes from the use of mesh deformation techniques used to accurately model the topography in 2D softwares. This technique used for structured discretization (Res2dinv) is prohibed for strong topography (>60 %) and leads to a small computational errors. A wide geophysical survey was carried out on the Puy de Dôme volcano resulting in 12 ERT profiles with approximatively 800 electrodes. We performed two processing stages by inverting independently each profiles in 2D (RES2DINV software) and the complete data set in 3D (EResI). The comparison of the 3D inversion results with those obtained through a conventional 2D inversion process underlined that EResI allows to accurately take into account the random electrodes positioning and reduce out-line artefacts into the inversion models due to positioning errors out of the profile axis. This comparison also highlighted the advantages to integrate several ERT lines to compute the 3D models of complex volcanic structures. Finally, the resulting 3D model allows a better interpretation of the Puy de Dome Volcano.

Connections Among the Spatial and Temporal Structures in Tidal Currents, Internal Bores, and Surficial Sediment Distributions Over the Shelf off Palos Verdes, California

USGS Publications Warehouse

Noble, Marlene A.; Rosenberger, Kurt J.; Xu, Jingping; Signell, Richard P.; Steele, Alex

2009-01-01

The topography of the Continental Shelf in the central portion of the Southern California Bight has rapid variations over relatively small spatial scales. The width of the shelf off the Palos Verdes peninsula, just northwest of Los Angeles, California, is only 1 to 3 km. About 7 km southeast of the peninsula, the shelf within San Pedro Bay widens to about 20 km. In 2000, the Los Angeles County Sanitation District began deploying a dense array of moorings in this complex region of the central Southern California Bight to monitor local circulation patterns. Moorings were deployed at 13 sites on the Palos Verdes shelf and within the northwestern portion of San Pedro Bay. At each site, a mooring supported a string of thermistors and an adjacent bottom platform housed an Acoustic Doppler Current Profiler. These instruments collected vertical profiles of current and temperature data continuously for one to two years. The variable bathymetry in the region causes rapid changes in the amplitudes and spatial structures of barotropic tidal currents, internal tidal currents, and in the associated nonlinear baroclinic currents that occur at approximate tidal frequencies. The largest barotropic tidal constituent is M2, the principal semidiurnal tide. The amplitude of this tidal current changes over fairly short along-shelf length scales. Tidal-current amplitudes are largest in the transition region between the two shelves; they increase from about 5 cm/s over the northern San Pedro shelf to nearly 10 cm/s on the southern portion of the Palos Verdes Shelf. Tidal-current amplitudes are then reduced to less than 2 cm/s over the very narrow section of the northern Palos Verdes shelf that lies just 6 km upcoast of the southern sites. Models suggest that the amplitude of the barotropic M2 tidal currents, which propagate toward the northwest primarily as a Kelvin wave, is adjusting to the short topographic length scales in the region. Semidiurnal sea-level oscillations are, as expected, independent of these topographic variations; they have a uniform amplitude and phase structure over the entire region. Because the cross-shelf angle of the seabed over most of the Palos Verdes shelf is 1 to 3 degrees, which is critical for the local generation and/or enhancement of nonlinear characteristics in semidiurnal internal tides, some internal tidal-current events have strong asymmetric current oscillations that are enhanced near the seabed. Near-bottom currents in these events are directed primarily offshore with amplitudes that exceed 30 cm/s. The spatial patterns in these energetic near-bottom currents have fairly short-length scales. They are largest over the inner shelf and in the transition region between the Palos Verdes and San Pedro shelves. This spatial pattern is similar to that found in the barotropic tidal currents. Because these baroclinic currents have an approximate tidal frequency, an asymmetric vertical structure, and a somewhat stable phase, they can produce a non-zero depth-mean flow for periods of a few months. These baroclinic currents can interact with the barotropic tidal current and cause an apparent increase (or decrease) in the estimated barotropic tidal-current amplitude. The apparent amplitude of the barotropic tidal current may change by 30 to 80 percent or more in a current record that is less than three months long. The currents and surficial sediments in this region are in dynamic equilibrium in that the spatial patterns in bottom stresses generated by near-bed currents from surface tides, internal tides, and internal bores partly control the spatial patterns in the local sediments. Coarser sediments are found in the regions with enhanced bottom stresses (that is, over the inner shelf and in the region between the Palos Verdes and San Pedro shelves). Finer sediments are found over the northwestern portion of the Palos Verdes shelf, where near-bottom currents are relatively weak. The nonlinear asymmetries in the i

Gulf Coast, Shaded Relief and Colored Height

NASA Technical Reports Server (NTRS)

2004-01-01

[figure removed for brevity, see original site] [figure removed for brevity, see original site] Figure 1Figure 2

The topography of the Gulf Coast states is well shown in this color-coded shaded relief map generated with data from the Shuttle Radar Topography Mission. The image on the top (see Figure 1) is a standard view showing southern Louisiana, Mississippi, Alabama and the panhandle of Florida. Green colors indicate low elevations, rising through yellow and tan, to white at the highest elevations.

For the view on the bottom (see Figure 2), elevations below 10 meters (33 feet) above sea level have been colored light blue. These low coastal elevations are especially vulnerable to flooding associated with storm surges. Planners can use data like these to predict which areas are in the most danger and help develop mitigation plans in the event of particular flood events.

Elevation data used in this image were acquired by the Shuttle Radar Topography Mission aboard the Space Shuttle Endeavour, launched on Feb. 11, 2000. SRTM used the same radar instrument that comprised the Spaceborne Imaging Radar-C/X-Band Synthetic Aperture Radar (SIR-C/X-SAR) that flew twice on the Space Shuttle Endeavour in 1994. SRTM was designed to collect 3-D measurements of the Earth's surface. To collect the 3-D data, engineers added a 60-meter (approximately 200-foot) mast, installed additional C-band and X-band antennas, and improved tracking and navigation devices. The mission is a cooperative project between NASA, the National Geospatial-Intelligence Agency (NGA) of the U.S. Department of Defense and the German and Italian space agencies. It is managed by NASA's Jet Propulsion Laboratory, Pasadena, Calif., for NASA's Science Mission Directorate, Washington, D.C.

Location: 31 degrees north latitude, 88 degrees west longitude Orientation: North toward the top, Mercator projection Size: 702 by 433 kilometers (435 by 268 miles) Image Data: shaded and colored SRTM elevation model Date Acquired: February 2000

3-D Voxel FEM Simulation of Seismic Wave Propagation in a Land-Sea Structure with Topography

NASA Astrophysics Data System (ADS)

Ikegami, Y.; Koketsu, K.

2003-12-01

We have already developed the voxel FEM (finite element method) code to simulate seismic wave propagation in a land structure with surface topography (Koketsu, Fujiwara and Ikegami, 2003). Although the conventional FEM often requires much larger memory, longer computation time and farther complicated mesh generation than the Finite Difference Method (FDM), this code consumes a similar amount of memory to FDM and spends only 1.4 times longer computation time thanks to the simplicity of voxels (hexahedron elements). The voxel FEM was successfully applied to inland earthquakes, but most earthquakes in a subduction zone occur beneath a sea, so that a simulation in a land-sea structure should be essential for waveform modeling and strong motion prediction there. We now introduce a domain of fluid elements into the model and formulate displacements in the elements using the Lagrange method. Sea-bottom motions are simulated for the simple land-sea models of Okamoto and Takenaka (1999). The simulation results agree well with their reflectivity and FDM seismograms. In order to enhance numerical stability, not only a variable mesh but also an adaptive time step is introduced. We can now choose the optimal time steps everywhere in the model based the Courant condition. This doubly variable formulation may result in inefficient parallel computing. The wave velocity in a shallow part is lower than that in a deeper part. Therefore, if the model is divided into horizontal slices and they are assigned to CPUs, a shallow slice will consist of only small elements. This can cause unbalanced loads on the CPUs. Accordingly, the model is divided into vertical slices in this study. They also reduce inter-processor communication, because a vertical cross section is usually smaller than a horizontal one. In addition, we will consider higher-order FEM formulation compatible to the fourth-order FDM. We will also present numerical examples to demonstrate the effects of a sea and surface topography on seismic waves and ground motions.

Calculation of parameters of technological equipment for deep-sea mining

NASA Astrophysics Data System (ADS)

Yungmeister, D. A.; Ivanov, S. E.; Isaev, A. I.

2018-03-01

The actual problem of extracting minerals from the bottom of the world ocean is considered. On the ocean floor, three types of minerals are of interest: iron-manganese concretions (IMC), cobalt-manganese crusts (CMC) and sulphides. The analysis of known designs of machines and complexes for the extraction of IMC is performed. These machines are based on the principle of excavating the bottom surface; however such methods do not always correspond to “gentle” methods of mining. The ecological purity of such mining methods does not meet the necessary requirements. Such machines require the transmission of high electric power through the water column, which in some cases is a significant challenge. The authors analyzed the options of transportation of the extracted mineral from the bottom. The paper describes the design of machines that collect IMC by the method of vacuum suction. In this method, the gripping plates or drums are provided with cavities in which a vacuum is created and individual IMC are attracted to the devices by a pressure drop. The work of such machines can be called “gentle” processing technology of the bottom areas. Their environmental impact is significantly lower than mechanical devices that carry out the raking of IMC. The parameters of the device for lifting the IMC collected on the bottom are calculated. With the use of Kevlar ropes of serial production up to 0.06 meters in diameter, with a cycle time of up to 2 hours and a lifting speed of up to 3 meters per second, a productivity of about 400,000 tons per year can be realized for IMC. The development of machines based on the calculated parameters and approbation of their designs will create a unique complex for the extraction of minerals at oceanic deposits.

Widespread Refreezing of Both Surface and Basal Melt Water Beneath the Greenland Ice Sheet

NASA Astrophysics Data System (ADS)

Bell, R. E.; Tinto, K. J.; Das, I.; Wolovick, M.; Chu, W.; Creyts, T. T.; Frearson, N.

2013-12-01

The isotopically and chemically distinct, bubble-free ice observed along the Greenland Ice Sheet margin both in the Russell Glacier and north of Jacobshavn must have formed when water froze from subglacial networks. Where this refreezing occurs and what impact it has on ice sheet processes remain unclear. We use airborne radar data to demonstrate that freeze-on to the ice sheet base and associated deformation produce large ice units up to 700 m thick throughout northern Greenland. Along the ice sheet margin, in the ablation zone, surface meltwater, delivered via moulins, refreezes to the ice sheet base over rugged topography. In the interior, water melted from the ice sheet base is refrozen and surrounded by folded ice. A significant fraction of the ice sheet is modified by basal freeze-on and associated deformation. For the Eqip and Petermann catchments, representing the ice sheet margin and interior respectively, extensive airborne radar datasets show that 10%-13% of the base of the ice sheet and up to a third of the catchment width is modified by basal freeze-on. The interior units develop over relatively subdued topography with modest water flux from basal melt where conductive cooling likely dominates. Steps in the bed topography associated with subglacial valley networks may foster glaciohydraulic supercooling. The ablation zone units develop where both surface melt and crevassing are widespread and large volumes of surface meltwater will reach the base of the ice sheet. The relatively steep topography at the upslope edge of the ablation zone units combined with the larger water flux suggests that supercooling plays a greater role in their formation. The ice qualities of the ablation zone units should reflect the relatively fresh surface melt whereas the chemistry of the interior units should reflect solute-rich basal melt. Changes in basal conditions such as the presence of till patches may contribute to the formation of the large basal units near the Northeast Ice Stream. The contrasting rheology of glacial and interglacial ice may also enhance the deformation associated with freeze-on beneath large ice sheets. The occurrence of basal units both in the ice sheet interior and in the thermally very different ablation zone indicates refreezing is widespread and can occur in many environments beneath an ice sheet. This process appears to influence the morphology and behavior of the ice sheet from top to bottom.

Behaviour of mantle transition zone discontinuities beneath the Indian Ocean from PP and SS precursors

NASA Astrophysics Data System (ADS)

Reiss, Anne-Sophie; Thomas, Christine

2015-04-01

As part of the RHUM-RUM project we investigate the upwelling plume beneath the island La Réunion, located in the Indian Ocean 200 km east of Madagascar. This plume belongs to one of the most active hotspot regions in the world and is still active today. Understanding the depth origin and dimensions of such a plume helps to better understand mantle processes and the heat flux of the Earth. If the plume originates at the core-mantle boundary the Earth is cooled down differently compared with an indirect cooling of plumes originating in the upper mantle. Here we use underside reflections of PP and SS waves off the seismic discontinuities at 410 km and 660 km depth that arrive as precursors to the main phase in order to investigate the topography of these discontinuities that mark the top and bottom of the mantle transition zone. If hotter or colder material intersects the mantle transition zone, the discontinuities at 410 km and 660 km depth are deflected, hence the topography of the mantle transition zone can be an indicator for an upwelling plume. The 410 km discontinuity, which exists due to the phase change of olivine to spinel, should be depressed significantly in the presence of hot upwelling material. Because of the opposite Clapeyron slope of the phase change of spinel to magnesiowuestite and perovskite at 660 km depth, the topography of this discontinuity should be elevated. For this study we analyse over 200 events with Mw ≥ 5.8 and bounce points distributed over the entire Indian Ocean. Array seismology methods, such as vespagrams and slowness-backazimuth analysis, are used to enhance the signal-to-noise-ratio and detect and identify precursors. Using different source-receiver combinations enables us to get a dense coverage of bounce points of PP and SS waves in the Indian Ocean and especially around La Réunion, also with crossing ray paths. The differential travel times of PP and SS arrivals and their precursors of robust stacks are converted into depth values of the seismic discontinuities. In our data, we can detect clear underside reflections off the 410 km discontinuity and also some off the 660 km discontinuity. The preliminary topography of the two discontinuities indicates a thinned mantle transition zone, which we interpret as a large upwelling beneath La Réunion.

ICE stereocamera system - photogrammetric setup for retrieval and analysis of small scale sea ice topography

NASA Astrophysics Data System (ADS)

Divine, Dmitry; Pedersen, Christina; Karlsen, Tor Ivan; Aas, Harald; Granskog, Mats; Renner, Angelika; Spreen, Gunnar; Gerland, Sebastian

2013-04-01

A new thin-ice Arctic paradigm requires reconsideration of the set of parameterizations of mass and energy exchange within the ocean-sea-ice-atmosphere system used in modern CGCMs. Such a reassessment would require a comprehensive collection of measurements made specifically on first-year pack ice with a focus on summer melt season when the difference from typical conditions for the earlier multi-year Arctic sea ice cover becomes most pronounced. Previous in situ studies have demonstrated a crucial importance of smaller (i.e. less than 10 m) scale surface topography features for the seasonal evolution of pack ice. During 2011-2012 NPI developed a helicopter borne ICE stereocamera system intended for mapping the sea ice surface topography and aerial photography. The hardware component of the system comprises two Canon 5D Mark II cameras, combined GPS/INS unit by "Novatel" and a laser altimeter mounted in a single enclosure outside the helicopter. The unit is controlled by a PXI chassis mounted inside the helicopter cabin. The ICE stereocamera system was deployed for the first time during the 2012 summer field season. The hardware setup has proven to be highly reliable and was used in about 30 helicopter flights over Arctic sea-ice during July-September. Being highly automated it required a minimal human supervision during in-flight operation. The deployment of the camera system was mostly done in combination with the EM-bird, which measures sea-ice thickness, and this combination provides an integrated view of sea ice cover along the flight track. During the flight the cameras shot sequentially with a time interval of 1 second each to ensure sufficient overlap between subsequent images. Some 35000 images of sea ice/water surface captured per camera sums into 6 Tb of data collected during its first field season. The reconstruction of the digital elevation model of sea ice surface will be done using SOCET SET commercial software. Refraction at water/air interface can also be taken into account, providing the valuable data on melt pond coverage, depth and bottom topography -the primary goals for the system at its present stage. Preliminary analysis of the reconstructed 3D scenes of ponded first year ice for some selected sites has shown a good agreement with in situ measurements demonstrating a good scientific potential of the ICE stereocamera system.

Topographic forcing and related uncertainties on glacier surface energy balance in High Mountain Asia

NASA Astrophysics Data System (ADS)

Olson, M.; Rupper, S.; Shean, D. E.

2017-12-01

Topography directly influences the amount of global radiation, as well as other key energy flux terms, arriving on a glacier surface. This is particularly important in regions of variable and complex topography such as High Mountain Asia (HMA). In this region surface energy and mass balance estimates often rely heavily on modeling, and thus require accurate accounting of topography through available remote sensing platforms. Our previous work shows that topographic shading from surrounding terrain can alter the mean daily potential direct shortwave radiation by upwards of 20% for some valley glaciers. In this work, we find in regions of high topographic relief that shading frequently dominates in the ablation zone rather than the accumulation zone, contrary to the findings of some previous studies. This however, is largely dependent on the valley aspect and relative relief of nearby terrain. In addition, we examine the impact of topography, primarily topographic shading, on components of surface energy balance for a large sample of glaciers across different regions in HMA. Our results show that while the impact of topographic shading is highly variable throughout HMA, the magnitude of influence can often be predicted based on simple characteristics such as latitude, valley aspect, and orientation of the immediate surrounding topography. We also explore the uncertainty in topographic shading and in calculated surface energy due to the spatial resolution and accuracy of DEMs. In particular, we compare the shading and energy balance results utilizing a suite of DEMs, including 2 m, 8 m, and 30 m World View DEMs, 30 m ASTER GDEM, 30 m SRTM DEM, and 30 m ALOS DEM. These results will help us improve glacier energy and mass balance modeling accuracy, and demonstrate limitations and uncertainties when modeling changes in surface energy fluxes due to surrounding topography for mountain glaciers.

Substrate micropatterns produced by polymer demixing regulate focal adhesions, actin anisotropy, and lineage differentiation of stem cells.

PubMed

Vega, Sebastián L; Arvind, Varun; Mishra, Prakhar; Kohn, Joachim; Sanjeeva Murthy, N; Moghe, Prabhas V

2018-06-12

Stem cells are adherent cells whose multipotency and differentiation can be regulated by numerous microenvironmental signals including soluble growth factors and surface topography. This study describes a simple method for creating distinct micropatterns via microphase separation resulting from polymer demixing of poly(desaminotyrosyl-tyrosine carbonate) (PDTEC) and polystyrene (PS). Substrates with co-continuous (ribbons) or discontinuous (islands and pits) PDTEC regions were obtained by varying the ratio of PDTEC and sacrificial PS. Human mesenchymal stem cells (MSCs) cultured on co-continuous PDTEC substrates for 3 days in bipotential adipogenic/osteogenic (AD/OS) induction medium showed no change in cell morphology but exhibited increased anisotropic cytoskeletal organization and larger focal adhesions when compared to MSCs cultured on discontinuous micropatterns. After 14 days in bipotential AD/OS induction medium, MSCs cultured on co-continuous micropatterns exhibited increased expression of osteogenic markers, whereas MSCs on discontinuous PDTEC substrates showed a low expression of adipogenic and osteogenic differentiation markers. Substrates with graded micropatterns were able to reproduce the influence of local underlying topography on MSC differentiation, thus demonstrating their potential for high throughput analysis. This work presents polymer demixing as a simple, non-lithographic technique to produce a wide range of micropatterns on surfaces with complex geometries to influence cellular and tissue regenerative responses. Gaining a better understanding of how engineered microenvironments influence stem cell differentiation is integral to increasing the use of stem cells and materials in a wide range of tissue engineering applications. In this study, we show the range of topography obtained by polymer demixing is sufficient for investigating how surface topography affects stem cell morphology and differentiation. Our findings show that co-continuous topographies favor early (3-day) cytoskeletal anisotropy and focal adhesion maturation as well as long-term (14-day) expression of osteogenic differentiation markers. Taken together, this study presents a simple approach to pattern topographies that induce divergent responses in stem cell morphology and differentiation. Copyright © 2018. Published by Elsevier Ltd.

Earth observations taken during the STS-77 mission

NASA Image and Video Library

1996-05-24

STS077-737-096 (19-29 May 1996) --- The Palmer River emerging from the left corner of the photograph separates the Gardener Range to the right from the James Ranges on the left. To the bottom and off the photograph is the MacDonnell Ranges. The circular feature at bottom right is a highly eroded impact crater located on Missionary Plain. Gosses Bluff is a complex crater about 22 kilometers in diameter and is estimated to be about 142 million years old.

Structural system reliability calculation using a probabilistic fault tree analysis method

NASA Technical Reports Server (NTRS)

Torng, T. Y.; Wu, Y.-T.; Millwater, H. R.

1992-01-01

The development of a new probabilistic fault tree analysis (PFTA) method for calculating structural system reliability is summarized. The proposed PFTA procedure includes: developing a fault tree to represent the complex structural system, constructing an approximation function for each bottom event, determining a dominant sampling sequence for all bottom events, and calculating the system reliability using an adaptive importance sampling method. PFTA is suitable for complicated structural problems that require computer-intensive computer calculations. A computer program has been developed to implement the PFTA.

Ground motion amplification at rock sites: the competing role of topography and fractured rocks in the San Giovanni fault, central Italy

NASA Astrophysics Data System (ADS)

Pischiutta, M.; Cara, F.; Di Giulio, G.; Vassallo, M.; Cultrera, G.

2017-12-01

Amplification at rock sites in areas of high topographic relief has been increasingly observed in the last years, with unexpected level of damage after strong earthquakes. In regions affected by recent tectonic activity, topographic irregularities can include fault damage zones. In such conditions, seismic waves can be locally amplified as a double effect of wave focusing along the topography and /or the presence of fractures/joints or locally weakened rocks. The role of topography vs. geological complexities in controlling the ground motion amplification at rock sites is a newly debated issue in the seismological community. The most crucial questions regard what is the real contribution of the topography shape and fracturing, and how to parameterize such effects for their inclusion in the seismic design codes. In this framework, the EMERSITO INGV task force installed 7 seismic stations across the San Giovanni fault, after the Amatrice mainshock of the 2016 sequence in Central Italy. This active normal fault is located in the area of the Montereale intermountain basin (Abruzzi region, Italy) and bounds the southwestern slope of Mt. Mozzano, a roughly 2D-shaped, up to 1450 m high pronounced topography. Moreover, this fault has been recently studied by several authors who performed detailed geological and geophysical surveys. Our stations recorded more than 100 earthquakes with magnitude ranging from 2.5 to 3.9 as well as a 4.4 M earthquake with hypocenter in Capitignano district, few kilometres far. We have analyzed in detail the recorded signals calculating the traditional spectral ratios at single station (HVSRs) and using the reference site (SSRs) using both ambient noise and earthquakes. In order to obtain a robust estimate of the site amplification effect at each station, we have investigated the influence of backazimuth and epicentral distance. We have also applied the time-domain covariance matrix analysis and the frequency domain polarization analysis. We have found that, in spite of the complexity of the seismic data, the observed polarization pattern is generally oriented orthogonal to the ridge elongation, as well as to the fault strike, suggesting the existence of a high angle relation between ground motion polarization and fracture systems.

Sedimentary processes on the Atlantic Continental Slope of the United States

USGS Publications Warehouse

Knebel, H.J.

1984-01-01

Until recently, the sedimentary processes on the United States Atlantic Continental Slope were inferred mainly from descriptive studies based on the bathymetry and on widely spaced grab samples, bottom photographs, and seismic-reflection profiles. Over the past 6 years, however, much additional information has been collected on the bottom morphology, characteristics of shallow-subbottom strata, velocity of bottom currents, and transport of suspended and bottom sediments. A review of these new data provides a much clearer understanding of the kinds and relative importance of gravitational and hydrodynamic processes that affect the surface sediments. On the rugged slope between Georges Bank and Cape Lookout, N.C., these processes include: (1) small scale mass wasting within submarine canyons and peripheral gullies; (2) density flows within some submarine valleys; (3) sand spillover near the shelf break; (4) sediment creep on the upper slope; and (5) hemipelagic sedimentation on the middle and lower slope. The area between Georges Bank and Hudson Canyon is further distinguished by the relative abundance of large-scale slump scars and deposits on the open slope, the presence of ice-rafted debris, and the transport of sand within the heads of some submarine canyons. Between Cape Lookout and southern Florida, the slope divides into two physiographic units, and the topography is smooth and featureless. On the Florida-Hatteras Slope, offshelf sand spillover and sediment winnowing, related to Gulf Stream flow and possibly to storm-driven currents, are the major processes, whereas hemipelagic sedimentation is dominant over the offshore slope along the seaward edge of the Blake Plateau north of the Blake Spur. Slumping generally is absent south of Cape Lookout, although one large slump scarp (related to uplift over salt diapirs) has been identified east of Cape Romain. Future studies concerning sedimentary processes on the Atlantic slope need to resolve: (1) the ages and mechanisms of mass wasting; (2) the accumulation rates and thicknesses of hemipelagic sediments; and (3) the causes and variability of offshelf sand spillover, sediment winnowing, and canyon transport. 

Geophysical evidence for the evolution of the California Inner Continental Borderland as a metamorphic core complex

USGS Publications Warehouse

ten Brink, Uri S.; Zhang, Jie; Brocher, Thomas M.; Okaya, David A.; Klitgord, Kim D.; Fuis, Gary S.

2000-01-01

We use new seismic and gravity data collected during the 1994 Los Angeles Region Seismic Experiment (LARSE) to discuss the origin of the California Inner Continental Borderland (ICB) as an extended terrain possibly in a metamorphic core complex mode. The data provide detailed crustal structure of the Borderland and its transition to mainland southern California. Using tomographic inversion as well as traditional forward ray tracing to model the wide-angle seismic data, we find little or no sediments, low (≤6.6 km/s) P wave velocity extending down to the crust-mantle boundary, and a thin crust (19 to 23 km thick). Coincident multichannel seismic reflection data show a reflective lower crust under Catalina Ridge. Contrary to other parts of coastal California, we do not find evidence for an underplated fossil oceanic layer at the base of the crust. Coincident gravity data suggest an abrupt increase in crustal thickness under the shelf edge, which represents the transition to the western Transverse Ranges. On the shelf the Palos Verdes Fault merges downward into a landward dipping surface which separates "basement" from low-velocity sediments, but interpretation of this surface as a detachment fault is inconclusive. The seismic velocity structure is interpreted to represent Catalina Schist rocks extending from top to bottom of the crust. This interpretation is compatible with a model for the origin of the ICB as an autochthonous formerly hot highly extended region that was filled with the exhumed metamorphic rocks. The basin and ridge topography and the protracted volcanism probably represent continued extension as a wide rift until ∼13 m.y. ago. Subduction of the young and hot Monterey and Arguello microplates under the Continental Borderland, followed by rotation and translation of the western Transverse Ranges, may have provided the necessary thermomechanical conditions for this extension and crustal inflow.

Utilizing Lidar Data for Detection of Channel Migration: Taylor Valley, Antarctica

NASA Astrophysics Data System (ADS)

Barlow, M. C.; Telling, J. W.; Glennie, C.; Fountain, A.

2017-12-01

The McMurdo Dry Valleys is the largest ice-free expanse in Antarctica and one of the most studied regions on the continent. The valleys are a hyper-arid, cold-polar desert that receives little precipitation (<50 mm weq yr-1). The valley bottoms are covered in a sandy-gravel, dotted with ice-covered lakes and ponds, and alpine glaciers that descend from the surrounding mountains. Glacial melt feeds the lakes via ephemeral streams that flow 6 - 10 weeks each summer. Field observations indicate that the valley floors, particularly in Taylor Valley, contain numerous abandoned stream channels but, given the modest stream flows, channel migration is rarely observed. Only a few channels have been surveyed in the field due to the slow pace of manual methods. Here we present a method to assess channel migration over a broad region in order to study the pattern of channel migration as a function of climatic and/or geologic gradients in Taylor Valley. Raster images of high-resolution topography were created from two lidar (Light Detection and Ranging) datasets and were used to analyze channel migration in Taylor Valley. The first lidar dataset was collected in 2001 by NASA's Airborne Topographic Mapper (ATM) and the second was collected by the National Center for Airborne Laser Mapping (NCALM) in 2014 with an Optech Titan Sensor. The channels were extracted for each dataset using GeoNet, which is an open source tool used for the automatic extraction of channel networks. Channel migration was found to range from 0 to 50 cm per year depending upon the location. Channel complexity was determined based on the change in the number of channel branches and their length. We present the results for various regions in Taylor Valley with differing degrees of stream complexity. Further research is being done to determine factors that drive channel migration rates in this unique environment.

Test-retest assessment of cortical activation induced by repetitive transcranial magnetic stimulation with brain atlas-guided optical topography

NASA Astrophysics Data System (ADS)

Tian, Fenghua; Kozel, F. Andrew; Yennu, Amarnath; Croarkin, Paul E.; McClintock, Shawn M.; Mapes, Kimberly S.; Husain, Mustafa M.; Liu, Hanli

2012-11-01

Repetitive transcranial magnetic stimulation (rTMS) is a technology that stimulates neurons with rapidly changing magnetic pulses with demonstrated therapeutic applications for various neuropsychiatric disorders. Functional near-infrared spectroscopy (fNIRS) is a suitable tool to assess rTMS-evoked brain responses without interference from the magnetic or electric fields generated by the TMS coil. We have previously reported a channel-wise study of combined rTMS/fNIRS on the motor and prefrontal cortices, showing a robust decrease of oxygenated hemoglobin concentration (Δ[HbO2]) at the sites of 1-Hz rTMS and the contralateral brain regions. However, the reliability of this putative clinical tool is unknown. In this study, we develop a rapid optical topography approach to spatially characterize the rTMS-evoked hemodynamic responses on a standard brain atlas. A hemispherical approximation of the brain is employed to convert the three-dimensional topography on the complex brain surface to a two-dimensional topography in the spherical coordinate system. The test-retest reliability of the combined rTMS/fNIRS is assessed using repeated measurements performed two to three days apart. The results demonstrate that the Δ[HbO2] amplitudes have moderate-to-high reliability at the group level; and the spatial patterns of the topographic images have high reproducibility in size and a moderate degree of overlap at the individual level.

Development of antifouling surfaces to reduce bacterial attachment

NASA Astrophysics Data System (ADS)

Graham, Mary Viola

Bacteria are exceptionally good at adhering to surfaces and forming complex structures known as biofilms. This process, known as biofouling, can cause problems for infrastructure (eg, clogging and damaging pipes), for the food industry (eg, contamination of processing surfaces and equipment, and for the medical industry (eg, contamination of indwelling medical devices). Accordingly, multiple strategies have been explored to combat biofouling, including chemical modification of surfaces, development of antibiotic coatings, and more recently, the use of engineered surface topography. When designed properly, engineered surface topographies can significantly reduce bacterial surface attachment, ultimately limiting surface colonization. In this work, we hypothesized that the morphology, size, spacing, and surface pre-treatment of topographical features should directly correlate with the size and shape of target organisms, in order to reduce biofouling. Topographical features with size and spacing from 0.25 to 2 mum were fabricated in silicone elastomer and tested against rod shaped bacteria with an average size of 0.5 x 2 mum and spherical bacteria (cocci) ranging from 0.5 - 1 μm in diameter. Antifouling properties of the different topographical features were tested in both static and flow-based assays, and under oxygen plasma-treated (hydrophilic) and untreated (hydrophobic) surface conditions. We found that surface pre-treatment universally affects the ability bacteria to attach to surfaces, while surface topography limits attachment in a manner dependent on the bacterial size/shape and the size/spacing of the topography.

Traveltime computation and imaging from rugged topography in 3D TTI media

NASA Astrophysics Data System (ADS)

Liu, Shaoyong; Wang, Huazhong; Yang, Qinyong; Fang, Wubao

2014-02-01

Foothill areas with rugged topography are of great potential for oil and gas seismic exploration, but subsurface imaging in these areas is very challenging. Seismic acquisition with larger offset and wider azimuth is necessary for seismic imaging in complex areas. However, the scale anisotropy in this case must be taken into account. To generalize the pre-stack depth migration (PSDM) to 3D transversely isotropic media with vertical symmetry axes (VTI) and tilted symmetry axes (TTI) from rugged topography, a new dynamic programming approach for the first-arrival traveltime computation method is proposed. The first-arrival time on every uniform mesh point is calculated based on Fermat's principle with simple calculus techniques and a systematic mapping scheme. In order to calculate the minimum traveltime, a set of nonlinear equations is solved on each mesh point, where the group velocity is determined by the group angle. Based on the new first-arrival time calculation method, the corresponding PSDM and migration velocity analysis workflow for 3D anisotropic media from rugged surface is developed. Numerical tests demonstrate that the proposed traveltime calculation method is effective in both VTI and TTI media. The migration results for 3D field data show that it is necessary to choose a smooth datum to remove the high wavenumber move-out components for PSDM with rugged topography and take anisotropy into account to achieve better images.

Dimensional metrology of smooth micro structures utilizing the spatial modulation of white-light interference fringes

NASA Astrophysics Data System (ADS)

Zhou, Yi; Tang, Yan; Deng, Qinyuan; Liu, Junbo; Wang, Jian; Zhao, Lixin

2017-08-01

Dimensional metrology for micro structure plays an important role in addressing quality issues and observing the performance of micro-fabricated products. In white light interferometry, the proposed method is expected to measure three-dimensional topography through modulation depth in spatial frequency domain. A normalized modulation depth is first obtained in the xy plane (image plane) for each CCD image individually. After that, the modulation depth of each pixel is analyzed along the scanning direction (z-axis) to reshape the topography of micro samples. Owing to the characteristics of modulation depth in broadband light interferometry, the method could effectively suppress the negative influences caused by light fluctuations and external irradiance disturbance. Both theory and experiments are elaborated in detail to verify that the modulation depth-based method can greatly level up the stability and sensitivity with satisfied precision in the measurement system. This technique can achieve an improved robustness in a complex measurement environment with the potential to be applied in online topography measurement such as chemistry and medical domains.

Numerical simulation and optimization of casting process for complex pump

NASA Astrophysics Data System (ADS)

Liu, Xueqin; Dong, Anping; Wang, Donghong; Lu, Yanling; Zhu, Guoliang

2017-09-01

The complex shape of the casting pump body has large complicated structure and uniform wall thickness, which easy give rise to casting defects. The numerical simulation software ProCAST is used to simulate the initial top gating process, after analysis of the material and structure characteristics of the high-pressure pump. The filling process was overall smooth, not there the water shortage phenomenon. But the circular shrinkage defects appear at the bottom of casting during solidification process. Then, the casting parameters were optimized and adding cold iron in the bottom. The shrinkage weight was reduced from 0.00167g to 0.0005g. The porosity volume was reduced from 1.39cm3 to 0.41cm3. The optimization scheme is simulated and actual experimented. The defect has been significantly improved.

Structure of homeodomain-leucine zipper/DNA complexes studied using hydroxyl radical cleavage of DNA and methylation interference.

PubMed

Tron, Adriana E; Comelli, Raúl N; Gonzalez, Daniel H

2005-12-27

Homeodomain-leucine zipper (HD-Zip) proteins, unlike most homeodomain proteins, bind a pseudopalindromic DNA sequence as dimers. We have investigated the structure of the DNA complexes formed by two HD-Zip proteins with different nucleotide preferences at the central position of the binding site using footprinting and interference methods. The results indicate that the respective complexes are not symmetric, with the strand bearing a central purine (top strand) showing higher protection around the central region and the bottom strand protected toward the 3' end. Binding to a sequence with a nonpreferred central base pair produces a decrease in protection in either the top or the bottom strand, depending upon the protein. Modeling studies derived from the complex formed by the monomeric Antennapedia homeodomain with DNA indicate that in the HD-Zip/DNA complex the recognition helix of one of the monomers is displaced within the major groove respective to the other one. This monomer seems to lose contacts with a part of the recognition sequence upon binding to the nonpreferred site. The results show that the structure of the complex formed by HD-Zip proteins with DNA is dependent upon both protein intrinsic characteristics and the nucleotides present at the central position of the recognition sequence.

Movement of tagged dredged sand at thalweg disposal sites in the Upper Mississippi River. Volume 2. Savanna Bay and Duck Creek sites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paddock, R.A.; McCown, D.L.

Experiments were conducted on the Upper Mississippi River at two sites, Savanna Bay and Duck Creek, to investigate the movement of dredged sand after disposal in the thalweg. These experiments are part of a larger study, which includes similar experiments conducted earlier at two other sites on the Upper Mississippi River. At the Savanna Bay site, hydraulically dredged sand was tagged with sand coated with fluorescent dye before being deposited as a pile in the thalweg. Bathymetric surveys and surficial bottom sampling were conducted on five occasions over a nine-month period following disposal to identify changes in the topography ofmore » the pile and to detect the presence of dyed sand. At the Duck Creek site, only bathymetric surveys were conducted. The general behavior of the disposal piles at these two new sites was similar to that of the piles at the first two sites. Topographic evidence of the piles disappeared, and bottom conditions similar to the predisposal conditions were reestablished following the first period of high river flows after disposal. At Savanna Bay, as had happened at the first two sites, the tagged sand remained in the main river channel as it moved downstream in response to flood currents and did not migrate into nearby border areas, backwaters, or sloughs. 6 references, 89 figures, 2 tables.« less

Data-Informed Large-Eddy Simulation of Coastal Land-Air-Sea Interactions

NASA Astrophysics Data System (ADS)

Calderer, A.; Hao, X.; Fernando, H. J.; Sotiropoulos, F.; Shen, L.

2016-12-01

The study of atmospheric flows in coastal areas has not been fully addressed due to the complex processes emerging from the land-air-sea interactions, e.g., abrupt change in land topography, strong current shear, wave shoaling, and depth-limited wave breaking. The available computational tools that have been applied to study such littoral regions are mostly based on open-ocean assumptions, which most times do not lead to reliable solutions. The goal of the present study is to better understand some of these near-shore processes, employing the advanced computational tools, developed in our research group. Our computational framework combines a large-eddy simulation (LES) flow solver for atmospheric flows, a sharp-interface immersed boundary method that can deal with real complex topographies (Calderer et al., J. Comp. Physics 2014), and a phase-resolved, depth-dependent, wave model (Yang and Shen, J. Comp. Physics 2011). Using real measured data taken in the FRF station in Duck, North Carolina, we validate and demonstrate the predictive capabilities of the present computational framework, which are shown to be in overall good agreement with the measured data under different wind-wave scenarios. We also analyse the effects of some of the complex processes captured by our simulation tools.

Microstructure and Mixing: Interactions of Energetic Flow and Eddies with Complex Topography in the Western Indian Ocean

DTIC Science & Technology

2015-09-17

the region of interest from SAEON archives Task 3 An offshore survey - to make some basic measurements in the area of interest and develop AUV ... AUV deployment procedures and skills using local resources. 4. Glider deployment in collaboration with WHOI YEAR 2 1. Further measurements based

Disturbance and topography shape nitrogen availability and δ15N over long-term forest succession

EPA Science Inventory

Forest disturbance and long-term succession can promote open N cycling that increases N loss and soil δ15N values. We examined soil and foliar patterns in N and δ15N, and soil N mineralization, across a topographically complex montane forest landscape influenced by human logging ...

Flood disturbance in a forested mountain landscape: interactions of land use and floods.

Treesearch

F.J. Swanson; S.L. Johnson; S.V. Gregory; S.A. Acker

1998-01-01

Recent flooding in the Pacific Northwest vividly illustrates the complexity of watershed and ecosystem responses to floods, especially in steep forest landscapes. Flooding involves a sequence of interactions that begins with climatic drivers. These drivers, generally rain and snowmelt, interact with landscape conditions, such as vegetation pattern and topography, to...

Oak woodland vegetation dynamics: a state and transition approach

Treesearch

Melvin R. George; Maximo F. Alonso

2008-01-01

California’s oak-woodlands are a complex, often multi-layered mosaic of grassland, shrubland, and woodland patches. While soil type and depth, topography, aspect, and geological substrate influence the distribution of these patches, disturbance and biological interactions are also important determinants of the patchy distribution of these plant communities. Fire...

Topography-mediated controls on local vegetation phenology estimated from MODIS vegetation index

Treesearch

Taehee Hwang; Conghe Song; James Vose; Lawrence Band

2011-01-01

Forest canopy phenology is an important constraint on annual water and carbon budgets, and responds to regional interannual climate variation. In steep terrain, there are complex spatial variations in phenology due to topographic influences on microclimate, community composition, and available soil moisture. In this study, we investigate spatial patterns of phenology...

Ground motion in the presence of complex Topography II: Earthquake sources and 3D simulations

USGS Publications Warehouse

Hartzell, Stephen; Ramirez-Guzman, Leonardo; Meremonte, Mark; Leeds, Alena L.

2017-01-01

Eight seismic stations were placed in a linear array with a topographic relief of 222 m over Mission Peak in the east San Francisco Bay region for a period of one year to study topographic effects. Seventy‐two well‐recorded local earthquakes are used to calculate spectral amplitude ratios relative to a reference site. A well‐defined fundamental resonance peak is observed with individual station amplitudes following the theoretically predicted progression of larger amplitudes in the upslope direction. Favored directions of vibration are also seen that are related to the trapping of shear waves within the primary ridge dimensions. Spectral peaks above the fundamental one are also related to topographic effects but follow a more complex pattern. Theoretical predictions using a 3D velocity model and accurate topography reproduce many of the general frequency and time‐domain features of the data. Shifts in spectral frequencies and amplitude differences, however, are related to deficiencies of the model and point out the importance of contributing factors, including the shear‐wave velocity under the topographic feature, near‐surface velocity gradients, and source parameters.

Geographical ecology of the palms (Arecaceae): determinants of diversity and distributions across spatial scales

PubMed Central

Eiserhardt, Wolf L.; Svenning, Jens-Christian; Kissling, W. Daniel; Balslev, Henrik

2011-01-01

Background The palm family occurs in all tropical and sub-tropical regions of the world. Palms are of high ecological and economical importance, and display complex spatial patterns of species distributions and diversity. Scope This review summarizes empirical evidence for factors that determine palm species distributions, community composition and species richness such as the abiotic environment (climate, soil chemistry, hydrology and topography), the biotic environment (vegetation structure and species interactions) and dispersal. The importance of contemporary vs. historical impacts of these factors and the scale at which they function is discussed. Finally a hierarchical scale framework is developed to guide predictor selection for future studies. Conclusions Determinants of palm distributions, composition and richness vary with spatial scale. For species distributions, climate appears to be important at landscape and broader scales, soil, topography and vegetation at landscape and local scales, hydrology at local scales, and dispersal at all scales. For community composition, soil appears important at regional and finer scales, hydrology, topography and vegetation at landscape and local scales, and dispersal again at all scales. For species richness, climate and dispersal appear to be important at continental to global scales, soil at landscape and broader scales, and topography at landscape and finer scales. Some scale–predictor combinations have not been studied or deserve further attention, e.g. climate on regional to finer scales, and hydrology and topography on landscape and broader scales. The importance of biotic interactions – apart from general vegetation structure effects – for the geographic ecology of palms is generally underexplored. Future studies should target scale–predictor combinations and geographic domains not studied yet. To avoid biased inference, one should ideally include at least all predictors previously found important at the spatial scale of investigation. PMID:21712297

Elastic Reverse Time Migration (RTM) From Surface Topography

NASA Astrophysics Data System (ADS)

Akram, Naveed; Chen, Xiaofei

2017-04-01

Seismic Migration is a promising data processing technique to construct subsurface images by projecting the recorded seismic data at surface back to their origins. There are numerous Migration methods. Among them, Reverse Time Migration (RTM) is considered a robust and standard imaging technology in present day exploration industry as well as in academic research field because of its superior performance compared to traditional migration methods. Although RTM is extensive computing and time consuming but it can efficiently handle the complex geology, highly dipping reflectors and strong lateral velocity variation all together. RTM takes data recorded at the surface as a boundary condition and propagates the data backwards in time until the imaging condition is met. It can use the same modeling algorithm that we use for forward modeling. The classical seismic exploration theory assumes flat surface which is almost impossible in practice for land data. So irregular surface topography has to be considered in simulation of seismic wave propagation, which is not always a straightforward undertaking. In this study, Curved grid finite difference method (CG-FDM) is adapted to model elastic seismic wave propagation to investigate the effect of surface topography on RTM results and explore its advantages and limitations with synthetic data experiments by using Foothill model with topography as the true model. We focus on elastic wave propagation rather than acoustic wave because earth actually behaves as an elastic body. Our results strongly emphasize on the fact that irregular surface topography must be considered for modeling of seismic wave propagation to get better subsurface images specially in mountainous scenario and suggest practitioners to properly handled the geometry of data acquired on irregular topographic surface in their imaging algorithms.

Elastic Reverse Time Migration (RTM) From Surface Topography

NASA Astrophysics Data System (ADS)

Naveed, A.; Chen, X.

2016-12-01

Seismic Migration is a promising data processing technique to construct subsurface images by projecting the recorded seismic data at surface back to their origins. There are numerous Migration methods. Among them, Reverse Time Migration (RTM) is considered a robust and standard imaging technology in present day exploration industry as well as in academic research field because of its superior performance compared to traditional migration methods. Although RTM is extensive computing and time consuming but it can efficiently handle the complex geology, highly dipping reflectors and strong lateral velocity variation all together. RTM takes data recorded at the surface as a boundary condition and propagates the data backwards in time until the imaging condition is met. It can use the same modeling algorithm that we use for forward modeling. The classical seismic exploration theory assumes flat surface which is almost impossible in practice for land data. So irregular surface topography has to be considered in simulation of seismic wave propagation, which is not always a straightforward undertaking. In this study, Curved grid finite difference method (CG-FDM) is adapted to model elastic seismic wave propagation to investigate the effect of surface topography on RTM results and explore its advantages and limitations with synthetic data experiments by using Foothill model with topography as the true model. We focus on elastic wave propagation rather than acoustic wave because earth actually behaves as an elastic body. Our results strongly emphasize on the fact that irregular surface topography must be considered for modeling of seismic wave propagation to get better subsurface images specially in mountainous scenario and suggest practitioners to properly handled the geometry of data acquired on irregular topographic surface in their imaging algorithms.

Ground-based LiDAR Measurements of Actively Inflating Pahoehoe Flows, Kilauea Volcano, Hawaii: Implications for Emplacement of Basaltic Units on Mars

NASA Astrophysics Data System (ADS)

Byrnes, J. M.; Finnegan, D. C.; Nicoll, K.; Anderson, S. W.

2007-05-01

Remote sensing datasets enable planetary volcanologists to extract information regarding eruption processes. Long-lived effusive eruptions at sites such as Kilauea Volcano (HI) provide opportunities to collect rich observational data sets, including detailed measurements of topography and extrusion rates, that allow comparisons between lava flow surface morphologies and emplacement conditions for use in interpreting similar morphological features associated with planetary lava flows. On Mars, the emplacement of basaltic lava flows is a volumetrically and spatially important process, creating both large-scale and small-scale surface morphologies. On Earth, low effusion rate eruptions on relatively horizontal slopes tend to create inflated lava flows that display hummocky topography. To better understand the processes involved in creating observed surface characteristics, we repeatedly measured the surface topography of an actively flowing and inflating basaltic unit within the Pu'u O'o flow field over a 5-day period. We used a ground-based laser-scanner (LiDAR) system that provided vertical and horizontal accuracies of 4 mm. Comparing DEMs from repeated laser scans yielded the magnitudes and styles of constructional processes, allowing us to quantify the relationship between pre- and post-emplacement surface topography. Our study site (roughly 200 m x 200 m) experienced about 5 m of vertical inflation over a 3 day period and created a new hummocky surface containing several tumuli. The temporal and spatial patterns of inflation were complex and showed no obvious relationship with underlying topography. High-precision morphometric measurements acquired using ground-based LiDAR affords us the opportunity to capture the essential boundary conditions necessary for evaluating and comparing high-resolution planetary data sets, such as those acquired by the MOC, HRSC, and HiRISE instruments.

Fitness and Individuality in Complex Life Cycles.

PubMed

Herron, Matthew D

2016-12-01

Complex life cycles are common in the eukaryotic world, and they complicate the question of how to define individuality. Using a bottom-up, gene-centric approach, I consider the concept of fitness in the context of complex life cycles. I analyze the fitness effects of an allele (or a trait) on different biological units within a complex life history and how these effects drive evolutionary change within populations. Based on these effects, I attempt to construct a concept of fitness that accurately predicts evolutionary change in the context of complex life cycles.

Deep-water longline fishing has reduced impact on Vulnerable Marine Ecosystems

PubMed Central

Pham, Christopher K.; Diogo, Hugo; Menezes, Gui; Porteiro, Filipe; Braga-Henriques, Andreia; Vandeperre, Frederic; Morato, Telmo

2014-01-01

Bottom trawl fishing threatens deep-sea ecosystems, modifying the seafloor morphology and its physical properties, with dramatic consequences on benthic communities. Therefore, the future of deep-sea fishing relies on alternative techniques that maintain the health of deep-sea ecosystems and tolerate appropriate human uses of the marine environment. In this study, we demonstrate that deep-sea bottom longline fishing has little impact on vulnerable marine ecosystems, reducing bycatch of cold-water corals and limiting additional damage to benthic communities. We found that slow-growing vulnerable species are still common in areas subject to more than 20 years of longlining activity and estimate that one deep-sea bottom trawl will have a similar impact to 296–1,719 longlines, depending on the morphological complexity of the impacted species. Given the pronounced differences in the magnitude of disturbances coupled with its selectivity and low fuel consumption, we suggest that regulated deep-sea longlining can be an alternative to deep-sea bottom trawling. PMID:24776718

Sky-High I's

ERIC Educational Resources Information Center

Berry, Andrew J.

2004-01-01

When discussing the topic of elementary complex variables, students are often mystified by the fact that ii is real. After seeing a proof of this statement, a standard question is "well, what about iii or iiii etc., are these real or complex?" In this paper the meaning of the infinite power-tower iii...is considered both from the "bottom-up" and…

Biogeochemical evidence of vigorous mixing in the abyssal ocean

NASA Astrophysics Data System (ADS)

Lampitt, Richard S.; Popova, Ekaterina E.; Tyrrell, Toby

2003-05-01

The metabolic activities of biological communities living at the abyssal seabed create a strong source of nutrients and a sink for oxygen. If the published estimates of vertical mixing based on instantaneous microstructure measurements are correct, near to the abyssal seabed away from rough topographic features there should be enhanced concentrations of nitrate and phosphate and depletion of oxygen. Recent data on the vertical concentration profiles of inorganic nutrients and oxygen over the bottom 1000 m of the water column (World Ocean Circulation Experiment - WOCE) provide no such evidence. It is concluded that the effective vertical mixing rates are much more vigorous than previously indicated and may even be higher than estimates of average basin scale rates based on temperature and salinity distributions. We propose that the enhanced mixing associated with rough topography influences the entire volume of the abyssal ocean on short time scales (e.g., one month - one year).

The generation and propagation of internal gravity waves in a rotating fluid

NASA Technical Reports Server (NTRS)

Maxworthy, T.; Chabert Dhieres, G.; Didelle, H.

1984-01-01

The present investigation is concerned with an extension of a study conducted bu Maxworthy (1979) on internal wave generation by barotropic tidal flow over bottom topography. A short series of experiments was carried out during a limited time period on a large (14-m diameter) rotating table. It was attempted to obtain, in particular, information regarding the plan form of the waves, the exact character of the flow over the obstacle, and the evolution of the waves. The main basin was a dammed section of a long free surface water tunnel. The obstacle was towed back and forth by a wire harness connected to an electronically controlled hydraulic piston, the stroke and period of which could be independently varied. Attention is given to the evolution of the wave crests, the formation of solitary wave groups the evolution of the three-dimensional wave field wave shapes, the wave amplitudes, and particle motion.

Evaluation of SIR-B imagery for geologic and geomorphic mapping, hydrology, and oceanography in Australia

NASA Technical Reports Server (NTRS)

Honey, F. R.; Simpson, C. J.; Huntington, J.; Horwitz, R.; Byrne, G.; Nilsson, C.

1984-01-01

The objectives of a study to evaluate the potential of Shuttle Imaging Radar-B (SIR-B) imagery for various applications are outlined. Specific goals include: the development of techniques for registration multiple acquisition, varied illumination, and incidence-angle SIR-B imagery, and a model for estimation of the relative contributions to the backscattered radiation of topography, surface roughness, and dielectric and conductivity components; (2) the evaluation of SIR-B imagery for delineation of agricultural lands affected by secondary salinity in the southwest and southeast agricultural regions of Australia; (3) the development of techniques for application of SIR-B imagery for geologic, geomorphologic and soils mapping and mineral exploration; and (4) the evaluation of the use of SIR-B imagery in determining ocean currents, current shear patterns, internal waves and bottom features for specific locations off the Australian coast.

Water color and circulation southern Chesapeake Bay, part 1

NASA Technical Reports Server (NTRS)

Nichols, M. M.; Gordon, H. H.

1975-01-01

Satellite imagery from two EREP passes over the Rappahannock Estuary of the Chesapeake region is analyzed to chart colored water types, to delineate color boundaries and define circulatory patterns. Surface observations from boats and helicopters concurrent with Skylab overpass define the distributions of suspended sediment, transparency, temperature, salinity, phytoplankton, color of suspended material and optical ratio. Important features recorded by the imagery are a large-scale turbidity maximum and massive red tide blooms. Water movement is revealed by small-scale mixing patterns and tidal plumes of apparent sediment-laden water. The color patterns broadly reflect the bottom topography and the seaward gradient of suspended material between the river and the bay. Analyses of red, green and natural color photos by microdensitometry demonstrate the utility of charting water color types of potential use for managing estuarine water quality. The Skylab imagery is superior to aerial photography and surface observations for charting water color.

Topographic enhancement of vertical turbulent mixing in the Southern Ocean

PubMed Central

Mashayek, A.; Ferrari, R.; Merrifield, S.; Ledwell, J. R.; St Laurent, L.; Garabato, A. Naveira

2017-01-01

It is an open question whether turbulent mixing across density surfaces is sufficiently large to play a dominant role in closing the deep branch of the ocean meridional overturning circulation. The diapycnal and isopycnal mixing experiment in the Southern Ocean found the turbulent diffusivity inferred from the vertical spreading of a tracer to be an order of magnitude larger than that inferred from the microstructure profiles at the mean tracer depth of 1,500 m in the Drake Passage. Using a high-resolution ocean model, it is shown that the fast vertical spreading of tracer occurs when it comes in contact with mixing hotspots over rough topography. The sparsity of such hotspots is made up for by enhanced tracer residence time in their vicinity due to diffusion toward weak bottom flows. The increased tracer residence time may explain the large vertical fluxes of heat and salt required to close the abyssal circulation. PMID:28262808

Hydrodynamics and water quality models applied to Sepetiba Bay

NASA Astrophysics Data System (ADS)

Cunha, Cynara de L. da N.; Rosman, Paulo C. C.; Ferreira, Aldo Pacheco; Carlos do Nascimento Monteiro, Teófilo

2006-10-01

A coupled hydrodynamic and water quality model is used to simulate the pollution in Sepetiba Bay due to sewage effluent. Sepetiba Bay has a complicated geometry and bottom topography, and is located on the Brazilian coast near Rio de Janeiro. In the simulation, the dissolved oxygen (DO) concentration and biochemical oxygen demand (BOD) are used as indicators for the presence of organic matter in the body of water, and as parameters for evaluating the environmental pollution of the eastern part of Sepetiba Bay. Effluent sources in the model are taken from DO and BOD field measurements. The simulation results are consistent with field observations and demonstrate that the model has been correctly calibrated. The model is suitable for evaluating the environmental impact of sewage effluent on Sepetiba Bay from river inflows, assessing the feasibility of different treatment schemes, and developing specific monitoring activities. This approach has general applicability for environmental assessment of complicated coastal bays.

Tidal estimation in the Atlantic and Indian Oceans, 3 deg x 3 deg solution

NASA Technical Reports Server (NTRS)

Sanchez, Braulio V.; Rao, Desiraju B.; Steenrod, Stephen D.

1987-01-01

An estimation technique was developed to extrapolate tidal amplitudes and phases over entire ocean basins using existing gauge data and the altimetric measurements provided by satellite oceanography. The technique was previously tested. Some results obtained by using a 3 deg by 3 deg grid are presented. The functions used in the interpolation are the eigenfunctions of the velocity (Proudman functions) which are computed numerically from a knowledge of the basin's bottom topography, the horizontal plan form and the necessary boundary conditions. These functions are characteristic of the particular basin. The gravitational normal modes of the basin are computed as part of the investigation; they are used to obtain the theoretical forced solutions for the tidal constituents. The latter can provide the simulated data for the testing of the method and serve as a guide in choosing the most energetic functions for the interpolation.

Near-Inertial Internal Gravity Waves in the Ocean.

PubMed

Alford, Matthew H; MacKinnon, Jennifer A; Simmons, Harper L; Nash, Jonathan D

2016-01-01

We review the physics of near-inertial waves (NIWs) in the ocean and the observations, theory, and models that have provided our present knowledge. NIWs appear nearly everywhere in the ocean as a spectral peak at and just above the local inertial period f, and the longest vertical wavelengths can propagate at least hundreds of kilometers toward the equator from their source regions; shorter vertical wavelengths do not travel as far and do not contain as much energy, but lead to turbulent mixing owing to their high shear. NIWs are generated by a variety of mechanisms, including the wind, nonlinear interactions with waves of other frequencies, lee waves over bottom topography, and geostrophic adjustment; the partition among these is not known, although the wind is likely the most important. NIWs likely interact strongly with mesoscale and submesoscale motions, in ways that are just beginning to be understood.

Sediment sorting along tidal sand waves: A comparison between field observations and theoretical predictions

NASA Astrophysics Data System (ADS)

Van Oyen, Tomas; Blondeaux, Paolo; Van den Eynde, Dries

2013-07-01

A site-by-site comparison between field observations and theoretical predictions of sediment sorting patterns along tidal sand waves is performed for ten locations in the North Sea. At each site, the observed grain size distribution along the bottom topography and the geometry of the bed forms is described in detail and the procedure used to obtain the model parameters is summarized. The model appears to accurately describe the wavelength of the observed sand waves for the majority of the locations; still providing a reliable estimate for the other sites. In addition, it is found that for seven out of the ten locations, the qualitative sorting process provided by the model agrees with the observed grain size distribution. A discussion of the site-by-site comparison is provided which, taking into account uncertainties in the field data, indicates that the model grasps the major part of the key processes controlling the phenomenon.

A numerical world ocean general circulation model Part I. Basic design and barotropic experiment

NASA Astrophysics Data System (ADS)

Han, Young-June

1984-08-01

A new six-layer world ocean general circulation model based on the primitive system of equations is described in detail and its performance in the case of a homogeneous ocean is described. These test integrations show that the model is capable of reproducing the observed mean barotropic or vertically-integrated transport, as well as the seasonal variability of the major ocean gyres. The surface currents, however, are dominated by the Ekman transport, and such non-linear features as the western boundary currents and the equatorial countercurrents are poorly represented. The abyssal boundary countercurrents are also absent due to the lack of thermohaline forcing. The most conspicuous effect of the bottom topography on a homogeneous ocean is seen in the Southern ocean where the calculated Antarctic circumpolar transport through the Drake passage ( ≈ 10 Sv, with bathymetry included) greatly underestimates the observed transport (≈ 100 Sv).

Linear Water Waves

NASA Astrophysics Data System (ADS)

Kuznetsov, N.; Maz'ya, V.; Vainberg, B.

2002-08-01

This book gives a self-contained and up-to-date account of mathematical results in the linear theory of water waves. The study of waves has many applications, including the prediction of behavior of floating bodies (ships, submarines, tension-leg platforms etc.), the calculation of wave-making resistance in naval architecture, and the description of wave patterns over bottom topography in geophysical hydrodynamics. The first section deals with time-harmonic waves. Three linear boundary value problems serve as the approximate mathematical models for these types of water waves. The next section uses a plethora of mathematical techniques in the investigation of these three problems. The techniques used in the book include integral equations based on Green's functions, various inequalities between the kinetic and potential energy and integral identities which are indispensable for proving the uniqueness theorems. The so-called inverse procedure is applied to constructing examples of non-uniqueness, usually referred to as 'trapped nodes.'

NASA/Cousteau ocean bathymetry experiment. Remote bathymetry using high gain LANDSAT data

NASA Technical Reports Server (NTRS)

Polcyn, F. C.

1976-01-01

Satellite remote bathymetry was varified to 22 m depths where water clarity was defined by alpha = .058 1/m and bottom reflection, r(b), was 26%. High gain band 4 and band 5 CCT data from LANDSAT 1 was used for a test site in the Bahama Islands and near Florida. Near Florida where alpha = .11 1/m and r(b) = 20%, depths to 10 m were verified. Depth accuracies within 10% rms were achieved. Position accuracies within one LANDSAT pixel were obtained by reference to the Transit navigation satellites. The Calypso and the Beayondan, two ships, were at anchor on each of the seven days during LANDSAT 1 and 2 overpasses: LORAN C position information was used when the ships were underway making depth transects. Results are expected to be useful for updating charts showing shoals hazardous to navigation or in monitoring changes in nearshore topography.

Tidal Energy Available for Deep Ocean Mixing: Bounds from Altimetry Data

NASA Technical Reports Server (NTRS)

Egbert, Gary D.; Ray, Richard D.

1999-01-01

Maintenance of the large-scale thermohaline circulation has long presented a problem to oceanographers. Observed mixing rates in the pelagic ocean are an order of magnitude too small to balance the rate at which dense bottom water is created at high latitudes. Recent observational and theoretical work suggests that much of this mixing may occur in hot spots near areas of rough topography (e.g., mid-ocean ridges and island arcs). Barotropic tidal currents provide a very plausible source of energy to maintain these mixing processes. Topex/Poseidon (T/P) satellite altimetry data have made precise mapping of open ocean tidal elevations possible for the first time. We can thus obtain empirical, spatially localized, estimates of barotropic tidal dissipation. These provide an upper bound on the amount of tidal energy that is dissipated in the deep ocean, and hence is available for deep mixing. We will present and compare maps of open ocean tidal energy flux divergence, and estimates of tidal energy flux into shallow seas, derived from T/P altimetry data using both formal data assimilation methods and empirical approaches. With the data assimilation methods we can place formal error bars on the fluxes. Our results show that 20-25% of tidal energy dissipation occurs outside of the shallow seas, the traditional sink for tidal energy. This suggests that up to 1 TW of energy may be available from the tides (lunar and solar) for mixing the deep ocean. The dissipation indeed appears to be concentrated over areas of rough topography.

Tidal Energy Available for Deep Ocean Mixing: Bounds From Altimetry Data

NASA Technical Reports Server (NTRS)

Egbert, Gary D.; Ray, Richard D.

1999-01-01

Maintenance of the large-scale thermohaline circulation has long presented a problem to oceanographers. Observed mixing rates in the pelagic ocean are an order of magnitude too small to balance the rate at which dense bottom water is created at high latitudes. Recent observational and theoretical work suggests that much of this mixing may occur in hot spots near areas of rough topography (e.g., mid-ocean ridges and island arcs). Barotropic tidal currents provide a very plausible source of energy to maintain these mixing processes. Topex/Poseidon satellite altimetry data have made precise mapping of open ocean tidal elevations possible for the first time. We can thus obtain empirical, spatially localized, estimates of barotropic tidal dissipation. These provide an upper bound on the amount of tidal energy that is dissipated in the deep ocean, and hence is available for deep mixing. We will present and compare maps of open ocean tidal energy flux divergence, and estimates of tidal energy flux into shallow seas, derived from T/P altimetry data using both formal data assimilation methods and empirical approaches. With the data assimilation methods we can place formal error bars on the fluxes. Our results show that 20-25% of tidal energy dissipation occurs outside of the shallow seas, the traditional sink for tidal energy. This suggests that up to 1 TW of energy may be available from the tides (lunar and solar) for mixing the deep ocean. The dissipation indeed appears to be concentrated over areas of rough topography.

Tidal Energy Available for Deep Ocean Mixing: Bounds from Altimetry Data

NASA Technical Reports Server (NTRS)

Ray, Richard D.; Egbert, Gary D.

1999-01-01

Maintenance of the large-scale thermohaline circulation has long presented an interesting problem. Observed mixing rates in the pelagic ocean are an order of magnitude too small to balance the rate at which dense bottom water is created at high latitudes. Recent observational and theoretical work suggests that much of this mixing may occur in hot spots near areas of rough topography (e.g., mid-ocean ridges and island arcs). Barotropic tidal currents provide a very plausible source of energy to maintain these mixing processes. Topex/Poseidon satellite altimetry data have made precise mapping of open ocean tidal elevations possible for the first time. We can thus obtain empirical, spatially localized, estimates of barotropic tidal dissipation. These provide an upper bound on the amount of tidal energy that is dissipated in the deep ocean, and hence is available for deep mixing. We will present and compare maps of open ocean tidal energy flux divergence, and estimates of tidal energy flux into shallow seas, derived from T/P altimetry data using both formal data assimilation methods and empirical approaches. With the data assimilation methods we can place formal error bars on the fluxes. Our results show that 20-25% of tidal energy dissipation occurs outside of the shallow seas, the traditional sink for tidal energy. This suggests that up to 1 TW of energy may be available from the tides (lunar and solar) for mixing the deep ocean. The dissipation indeed appears to be concentrated over areas of rough topography.

Laboratory experiment on the 3D tide-induced Lagrangian residual current using the PIV technique

NASA Astrophysics Data System (ADS)

Chen, Yang; Jiang, Wensheng; Chen, Xu; Wang, Tao; Bian, Changwei

2017-12-01

The 3D structure of the tide-induced Lagrangian residual current was studied using the particle image velocimetry (PIV) technique in a long shallow narrow tank in the laboratory. At the mouth of the tank, a wave generator was used to make periodic wave which represents the tide movement, and at the head of the tank, a laterally sloping topography with the length of one fifth of the water tank was installed, above which the tide-induced Lagrangian residual current was studied. Under the weakly nonlinear condition in the present experiment setup, the results show that the Lagrangian residual velocity (LRV) field has a three-layer structure. The residual current flows inwards (towards the head) in the bottom layer and flows outwards in the middle layer, while in the surface layer, it flows inwards along the shallow side of the sloping topography and outwards along the deep side. The depth-averaged and breadth-averaged LRV are also analyzed based on the 3D LRV observations. Our results are in good agreement with the previous experiment studies, the analytical solutions with similar conditions and the observational results in real bays. Moreover, the volume flux comparison between the Lagrangian and Eulerian residual currents shows that the Eulerian residual velocity violates the mass conservation law while the LRV truly represents the inter-tidal water transport. This work enriches the laboratory studies of the LRV and offers valuable references for the LRV studies in real bays.

Complex local Moho topography in the Western Carpathians: Indication of the ALCAPA and the European Plate contact

NASA Astrophysics Data System (ADS)

Hrubcová, Pavla; Środa, Piotr

2015-04-01

Seismic data from deep refraction and wide-angle reflection profiles intersecting the Western Carpathians show distinct upper-mantle Pn phases with anomalous apparent velocities identified in the first and later arrivals. Their systematic analysis indicates that such phases are present in numerous seismic sections both for in-line and off-line shots. They are observed in data from profiles intersecting the Carpathians in the west at the contact with the Bohemian Massif; similar feature was also found in data at the northern edge of the Carpathians at the contact with the North European Platform. Modelling of these anomalous Pn phases shows that they originate due to local structural anomalies of the Moho discontinuity detected in several places along the Western Carpathian arc. Such anomalies are located in close lateral proximity of the Pieniny Klippen Belt representing the contact between the stable European Plate in the north and the ALCAPA (Alpine-Carpathian-Pannonian) microplate in the south. Thus, the complex local Moho topography modelled from the Pn phases suggests tectonic relation to the formation of the Carpathian orogen. The result is supported by correlation with the large-scale Carpathian conductivity anomaly modelled in the Carpathians at a mid-crustal level. Relative lateral position of these two structures together with the Pieniny Klippen Belt at the surface delineates a zone affected by deformations at various depths along the whole Western Carpathian arc. Tectonically, such course of the anomalous zone suggests that its origin is connected with the lithospheric deformations occurring near the contact of the European Plate and the ALCAPA microplate during the Carpathian orogeny, i.e., it is related to the collisional/transpressional processes during and after the Tertiary. Reference: Hrubcová, P., and Środa, P., Complex local Moho topography in the Western Carpathians: Indication of the ALCAPA and the European Plate contact. Tectonophysics, 2014, doi: 10.1016/j.tecto.2014.10.013.

The Spatial Resolution in the Computer Modelling of Atmospheric Flow over a Double-Hill Forested Region

NASA Astrophysics Data System (ADS)

Palma, J. L.; Rodrigues, C. V.; Lopes, A. S.; Carneiro, A. M. C.; Coelho, R. P. C.; Gomes, V. C.

2017-12-01

With the ever increasing accuracy required from numerical weather forecasts, there is pressure to increase the resolution and fidelity employed in computational micro-scale flow models. However, numerical studies of complex terrain flows are fundamentally bound by the digital representation of the terrain and land cover. This work assess the impact of the surface description on micro-scale simulation results at a highly complex site in Perdigão, Portugal, characterized by a twin parallel ridge topography, densely forested areas and an operating wind turbine. Although Coriolis and stratification effects cannot be ignored, the study is done under neutrally stratified atmosphere and static inflow conditions. The understanding gained here will later carry over to WRF-coupled simulations, where those conditions do not apply and the flow physics is more accurately modelled. With access to very fine digital mappings (<1m horizontal resolution) of both topography and land cover (roughness and canopy cover, both obtained through aerial LIDAR scanning of the surface) the impact of each element of the surface description on simulation results can be individualized, in order to estimate the resolution required to satisfactorily resolve them. Starting from the bare topographic description, in its coursest form, these include: a) the surface roughness mapping, b) the operating wind turbine, c) the canopy cover, as either body forces or added surface roughness (akin to meso-scale modelling), d) high resolution topography and surface cover mapping. Each of these individually will have an impact near the surface, including the rotor swept area of modern wind turbines. Combined they will considerably change flow up to boundary layer heights. Sensitivity to these elements cannot be generalized and should be assessed case-by-case. This type of in-depth study, unfeasible using WRF-coupled simulations, should provide considerable insight when spatially allocating mesh resolution for accurate resolution of complex flows.

3D Vp heterogeneity beneath the Marmara Sea: Shot tomography on a 2D OBS array

NASA Astrophysics Data System (ADS)

Bayrakci, Gaye; Laigle, Mireille; Bécel, Anne; Hirn, Alfred; Taymaz, Tuncay; Yolsal-Ćevikbilen, Seda

2010-05-01

After the 1999 Izmit and Duzce earthquakes, the multi-method SEISMARMARA seismic survey has been carried out with the aim to constrain the seismogenic part of the North Anatolian Fault (NAF) immersed into the Marmara Sea. During this survey, a network of 35 3-components Japanese Ocean Bottom Seismometers (OBS) placed on a 2D grid and land stations have recorded the current seismic activity for a period of 6 weeks and 2000 km of MCS profiles shot in the North Marmara Trough (NMT). In the present study the first arrival times of artificial sources are inverted with the well known local earthquake tomography (LET) code Simulps in order to approach the 3D upper-crustal heterogeneity which then could be implemented as initial model easily and without any loss of information into a joint inversion of the local earthquake data and shots. The 3D upper-crustal P-wave velocity heterogeneity of the North Marmara Trough (NMT) is derived by inverting a set of 16000 first arrival times of artificial sources. We have checked the sensitivity of the results to the grid geometry, the control parameters and the 1D initial velocity model. Due to a huge basement depth variation between the NMT rims and the trough itself, we have then designed a 3D a priori model by taking into account the sea-floor depth and the topographic trend of the basement. This 3D initial model allowed to include the shots recorded by 5 land stations into the inverted data set and to improve the image resolution at the borders of NMT. It allowed also to have a denser inversion grid which is needed for constraining the small wave-length heterogeneity of the Marmara Sea. The artefacts which may be due to the very large perturbations with respect to the 1D initial model were avoided with the use of this 3D initial model. The reliability of the results are validated by synthetic tests and by the comparison with the seismic reflection and refraction profiles which principal characteristics such as the sedimentary infill and basement geometry are remarkably recovered by the inversion in the well resolved regions. This study provides an unprecedented 3D view of the sedimentary thicknesses and of the basement topography which shows large vertical throws which may reach up to 7 km. It reveals also the variations of more than 2 km of the basement topography in a distance of 5 km along the sea-bottom trace of the North Anatolian Fault and its basins. The consideration of the 3D sedimentary thickness and of such basement topography is crucial for accurate relocation of the earthquakes by taking into account the 3D heterogeneity of both, upper-crustal P and S wave velocities. This 3D structure may find also further applications like in modeling studies for the evolution and the present activity of the Marmara Sea's features.

An integrative top-down and bottom-up qualitative model construction framework for exploration of biochemical systems.

PubMed

Wu, Zujian; Pang, Wei; Coghill, George M

Computational modelling of biochemical systems based on top-down and bottom-up approaches has been well studied over the last decade. In this research, after illustrating how to generate atomic components by a set of given reactants and two user pre-defined component patterns, we propose an integrative top-down and bottom-up modelling approach for stepwise qualitative exploration of interactions among reactants in biochemical systems. Evolution strategy is applied to the top-down modelling approach to compose models, and simulated annealing is employed in the bottom-up modelling approach to explore potential interactions based on models constructed from the top-down modelling process. Both the top-down and bottom-up approaches support stepwise modular addition or subtraction for the model evolution. Experimental results indicate that our modelling approach is feasible to learn the relationships among biochemical reactants qualitatively. In addition, hidden reactants of the target biochemical system can be obtained by generating complex reactants in corresponding composed models. Moreover, qualitatively learned models with inferred reactants and alternative topologies can be used for further web-lab experimental investigations by biologists of interest, which may result in a better understanding of the system.

Significant effect of topographic normalization of airborne LiDAR data on the retrieval of plant area index profile in mountainous forests

NASA Astrophysics Data System (ADS)

Liu, Jing; Skidmore, Andrew K.; Heurich, Marco; Wang, Tiejun

2017-10-01

As an important metric for describing vertical forest structure, the plant area index (PAI) profile is used for many applications including biomass estimation and wildlife habitat assessment. PAI profiles can be estimated with the vertically resolved gap fraction from airborne LiDAR data. Most research utilizes a height normalization algorithm to retrieve local or relative height by assuming the terrain to be flat. However, for many forests this assumption is not valid. In this research, the effect of topographic normalization of airborne LiDAR data on the retrieval of PAI profile was studied in a mountainous forest area in Germany. Results show that, although individual tree height may be retained after topographic normalization, the spatial arrangement of trees is changed. Specifically, topographic normalization vertically condenses and distorts the PAI profile, which consequently alters the distribution pattern of plant area density in space. This effect becomes more evident as the slope increases. Furthermore, topographic normalization may also undermine the complexity (i.e., canopy layer number and entropy) of the PAI profile. The decrease in PAI profile complexity is not solely determined by local topography, but is determined by the interaction between local topography and the spatial distribution of each tree. This research demonstrates that when calculating the PAI profile from airborne LiDAR data, local topography needs to be taken into account. We therefore suggest that for ecological applications, such as vertical forest structure analysis and modeling of biodiversity, topographic normalization should not be applied in non-flat areas when using LiDAR data.

Direct laser interference patterning for decreased bacterial attachment

NASA Astrophysics Data System (ADS)

Guenther, Denise; Valle, Jaoine; Burgui, Saioa; Gil, Carmen; Solano, Cristina; Toledo-Arana, Alejandro; Helbig, Ralf; Werner, Carsten; Lasa, Inigo; Lasagni, Andrés. F.

2016-03-01

In the past 15 years, many efforts were made to create functionalized artificial surfaces showing special anti-bacterial and anti-biofouling properties. Thereby, the topography of medical relevant materials plays an important role. However, the targeted fabrication of promising surface structures like hole-, lamella- and pyramid-like patterns with feature sizes in the sub-micrometer range in a one-step process is still a challenge. Optical and e-beam lithography, molding and selfassembly layers show a great potential to design topographies for this purpose. At the same time, most of these techniques are based on sequential processes, require masks or molds and thus are very device relevant and time consuming. In this work, we present the Direct Laser Interference Patterning (DLIP) technology as a capable method for the fast, flexible and direct fabrication of periodic micrometer- and submicrometer structures. This method offers the possibility to equip large plain areas and curved devices with 1D, 2D and 3D patterns. Simple 1D (e.g. lines) and complex 3D (e.g. lamella, pillars) patterns with periodic distances from 0.5 μm to 5 μm were fabricated on polymeric materials (polyimide, polystyrene). Subsequently, we characterized the adhesion behavior of Staphylococcus epidermidis and S. aureus bacteria under in vitro and in vivo conditions. The results revealed that the topographies have a significant impact on bacteria adhesion. On the one side, one-dimensional line-like structures especially with dimensions of the bacteria enhanced microbe attachment. While on the other hand, complex three-dimensional patterns prevented biofilm formation even after implantation and contamination in living organisms.

Enabling Access to High-Resolution Lidar Topography for Earth Science Research

NASA Astrophysics Data System (ADS)

Crosby, Christopher; Nandigam, Viswanath; Arrowsmith, Ramon; Baru, Chaitan

2010-05-01

High-resolution topography data acquired with lidar (light detection and ranging a.k.a. laser scanning) technology are revolutionizing the way we study the geomorphic processes acting along the Earth's surface. These data, acquired from either an airborne platform or from a tripod-mounted scanner, are emerging as a fundamental tool for research on a variety of topics ranging from earthquake hazards to ice sheet dynamics. Lidar topography data allow earth scientists to study the processes that contribute to landscape evolution at resolutions not previously possible yet essential for their appropriate representation. These datasets also have significant implications for earth science education and outreach because they provide an accurate digital representation of landforms and geologic hazards. However, along with the potential of lidar topography comes an increase in the volume and complexity of data that must be efficiently managed, archived, distributed, processed and integrated in order for them to be of use to the community. A single lidar data acquisition may generate terabytes of data in the form of point clouds, digital elevation models (DEMs), and derivative imagery. This massive volume of data is often difficult to manage and poses significant distribution challenges when trying to allow access to the data for a large scientific user community. Furthermore, the datasets can be technically challenging to work with and may require specific software and computing resources that are not readily available to many users. The U.S. National Science Foundation (NSF)-funded OpenTopography Facility (http://www.opentopography.org) is an online data access and processing system designed to address the challenges posed by lidar data, and to democratize access to these data for the scientific user community. OpenTopography provides free, online access to lidar data in a number of forms, including raw lidar point cloud data, standard DEMs, and easily accessible Google Earth visualizations. OpenTopography uses cyberinfrastructure resources to allow users, regardless of their level of expertise, to access lidar data products that can be applied to their research. In addition to data access, the system uses customized algorithms and high-performance computing resources to allow users to perform on-the-fly data processing tasks such as the generation of custom DEMs. OpenTopography's primarily focus is on large, community-oriented, scientific data sets, such as those acquired by the NSF-funded EarthScope project. We are actively expanding our holdings through collaborations with researchers and data providers to include data from a wide variety of landscapes and geologic domains. Ultimately, the goal is for OpenTopography to be the primary clearing house for Earth science-oriented high-resolution topography. This presentation will provide an overview of the OpenTopography Facility, including available data, processing capabilities and resources, examples from scientific use cases, and a snapshot of system and data usage thus far. We will also discuss current development activities related to deploying high-performance algorithms for hydrologic processing of DEMs, geomorphic change detection analysis, and the incorporation of full waveform lidar data into the system.

Alternative expression of vacuolar iron transporter and ferritin genes leads to blue/purple coloration of flowers in tulip cv. 'Murasakizuisho'.

PubMed

Shoji, Kazuaki; Momonoi, Kazumi; Tsuji, Tosiaki

2010-02-01

Flowers of tulip cv. 'Murasakizuisho' have a purple perianth except for the bottom region, which is blue in color even though it has the same anthocyanin, delphinidin 3-O-rutinoside, as the entire perianth. The development of the blue coloration in the perianth bottom is due to complexation by anthocyanin, flavonol and iron (Fe), as well as a vacuolar iron transporter, TgVit1. Although transient expression of TgVit1 in the purple cells led to a color change to light blue, the coloration of the transformed cells did not coincide with the dark blue color of the cells of the perianth bottom. We thought that another factor is required for the blue coloration of the cells of perianth bottom. To examine the effect of ferritin (FER), an Fe storage protein, on blue color development, we cloned an FER gene (TgFER1) and performed expression analyses. TgFER1 transcripts were found in the cells located in the upper region of the petals along with purple color development by anthocyanin and were not found in the blue cells of the perianth bottom. This gene expression is in contrast to that of TgVit1, expressed only in the cells of the perianth bottom. Co-expression of TgVIT1 and TgFER-RNAi, constructed for suppressing endogenous TgFER1 by RNA interference (RNAi), changed the purple petal cells to a dark blue color similar to that of the natural perianth bottom. These results strongly suggest that TgVit1 expression and TgFER1 suppression are critical for the development of blue color in the perianth bottom.

Bottom-up construction of a superstructure in a porous uranium-organic crystal

NASA Astrophysics Data System (ADS)

Li, Peng; Vermeulen, Nicolaas A.; Malliakas, Christos D.; Gómez-Gualdrón, Diego A.; Howarth, Ashlee J.; Mehdi, B. Layla; Dohnalkova, Alice; Browning, Nigel D.; O'Keeffe, Michael; Farha, Omar K.

2017-05-01

Bottom-up construction of highly intricate structures from simple building blocks remains one of the most difficult challenges in chemistry. We report a structurally complex, mesoporous uranium-based metal-organic framework (MOF) made from simple starting components. The structure comprises 10 uranium nodes and seven tricarboxylate ligands (both crystallographically nonequivalent), resulting in a 173.3-angstrom cubic unit cell enclosing 816 uranium nodes and 816 organic linkers—the largest unit cell found to date for any nonbiological material. The cuboctahedra organize into pentagonal and hexagonal prismatic secondary structures, which then form tetrahedral and diamond quaternary topologies with unprecedented complexity. This packing results in the formation of colossal icosidodecahedral and rectified hexakaidecahedral cavities with internal diameters of 5.0 nanometers and 6.2 nanometers, respectively—ultimately giving rise to the lowest-density MOF reported to date.

Bottom-Up and Top-Down Solid-State NMR Approaches for Bacterial Biofilm Matrix Composition

PubMed Central

Cegelski, Lynette

2015-01-01

The genomics and proteomics revolutions have been enormously successful in providing crucial “parts lists” for biological systems. Yet, formidable challenges exist in generating complete descriptions of how the parts function and assemble into macromolecular complexes and whole-cell assemblies. Bacterial biofilms are complex multicellular bacterial communities protected by a slime-like extracellular matrix that confers protection to environmental stress and enhances resistance to antibiotics and host defenses. As a non-crystalline, insoluble, heterogeneous assembly, the biofilm extracellular matrix poses a challenge to compositional analysis by conventional methods. In this Perspective, bottom-up and top-down solid-state NMR approaches are described for defining chemical composition in complex macrosystems. The “sum-of-theparts” bottom-up approach was introduced to examine the amyloid-integrated biofilms formed by E. coli and permitted the first determination of the composition of the intact extracellular matrix from a bacterial biofilm. An alternative top-down approach was developed to define composition in V. cholerae biofilms and relied on an extensive panel of NMR measurements to tease out specific carbon pools from a single sample of the intact extracellular matrix. These two approaches are widely applicable to other heterogeneous assemblies. For bacterial biofilms, quantitative parameters of matrix composition are needed to understand how biofilms are assembled, to improve the development of biofilm inhibitors, and to dissect inhibitor modes of action. Solid-state NMR approaches will also be invaluable in obtaining parameters of matrix architecture. PMID:25797008

Bottom-up and top-down solid-state NMR approaches for bacterial biofilm matrix composition.

PubMed

Cegelski, Lynette

2015-04-01

The genomics and proteomics revolutions have been enormously successful in providing crucial "parts lists" for biological systems. Yet, formidable challenges exist in generating complete descriptions of how the parts function and assemble into macromolecular complexes and whole-cell assemblies. Bacterial biofilms are complex multicellular bacterial communities protected by a slime-like extracellular matrix that confers protection to environmental stress and enhances resistance to antibiotics and host defenses. As a non-crystalline, insoluble, heterogeneous assembly, the biofilm extracellular matrix poses a challenge to compositional analysis by conventional methods. In this perspective, bottom-up and top-down solid-state NMR approaches are described for defining chemical composition in complex macrosystems. The "sum-of-the-parts" bottom-up approach was introduced to examine the amyloid-integrated biofilms formed by Escherichia coli and permitted the first determination of the composition of the intact extracellular matrix from a bacterial biofilm. An alternative top-down approach was developed to define composition in Vibrio cholerae biofilms and relied on an extensive panel of NMR measurements to tease out specific carbon pools from a single sample of the intact extracellular matrix. These two approaches are widely applicable to other heterogeneous assemblies. For bacterial biofilms, quantitative parameters of matrix composition are needed to understand how biofilms are assembled, to improve the development of biofilm inhibitors, and to dissect inhibitor modes of action. Solid-state NMR approaches will also be invaluable in obtaining parameters of matrix architecture. Copyright © 2015 Elsevier Inc. All rights reserved.

Bottom-up and top-down solid-state NMR approaches for bacterial biofilm matrix composition

NASA Astrophysics Data System (ADS)

Cegelski, Lynette

2015-04-01

The genomics and proteomics revolutions have been enormously successful in providing crucial "parts lists" for biological systems. Yet, formidable challenges exist in generating complete descriptions of how the parts function and assemble into macromolecular complexes and whole-cell assemblies. Bacterial biofilms are complex multicellular bacterial communities protected by a slime-like extracellular matrix that confers protection to environmental stress and enhances resistance to antibiotics and host defenses. As a non-crystalline, insoluble, heterogeneous assembly, the biofilm extracellular matrix poses a challenge to compositional analysis by conventional methods. In this perspective, bottom-up and top-down solid-state NMR approaches are described for defining chemical composition in complex macrosystems. The "sum-of-the-parts" bottom-up approach was introduced to examine the amyloid-integrated biofilms formed by Escherichia coli and permitted the first determination of the composition of the intact extracellular matrix from a bacterial biofilm. An alternative top-down approach was developed to define composition in Vibrio cholerae biofilms and relied on an extensive panel of NMR measurements to tease out specific carbon pools from a single sample of the intact extracellular matrix. These two approaches are widely applicable to other heterogeneous assemblies. For bacterial biofilms, quantitative parameters of matrix composition are needed to understand how biofilms are assembled, to improve the development of biofilm inhibitors, and to dissect inhibitor modes of action. Solid-state NMR approaches will also be invaluable in obtaining parameters of matrix architecture.

Determination of Selected Distillate Blending Solvents in Simple and Complex Aircraft Fuel Matrices Via Glass Capillary Gas Chromatography.

DTIC Science & Technology

1981-06-01

Division OCT 1 5 1981 June 1981 B Final Report for Period January 1979 - December 1979 j Approved for Public Release; Distribution Unlimited.-I AERO...Solvent 2040 *2040 Blending Solvent Xylene Bottoms *Xylene Bottoms Blending Solvent *Reference: Gleason, C. C., Oller , T. L. Shayeson, M. W., and Bahr...Table 4) was realistic for a 0% by volume point, 17 AFWAL- TR-80-2082 U J & J 18, AFWAL-TR-80-2082 TABLE 4 PEAK AREA PERCENTAGES FOUND IN EACH UNIQUE

Details of insect wing design and deformation enhance aerodynamic function and flight efficiency.

PubMed

Young, John; Walker, Simon M; Bomphrey, Richard J; Taylor, Graham K; Thomas, Adrian L R

2009-09-18

Insect wings are complex structures that deform dramatically in flight. We analyzed the aerodynamic consequences of wing deformation in locusts using a three-dimensional computational fluid dynamics simulation based on detailed wing kinematics. We validated the simulation against smoke visualizations and digital particle image velocimetry on real locusts. We then used the validated model to explore the effects of wing topography and deformation, first by removing camber while keeping the same time-varying twist distribution, and second by removing camber and spanwise twist. The full-fidelity model achieved greater power economy than the uncambered model, which performed better than the untwisted model, showing that the details of insect wing topography and deformation are important aerodynamically. Such details are likely to be important in engineering applications of flapping flight.

Digitally tunable physicochemical coding of material composition and topography in continuous microfibres.

PubMed

Kang, Edward; Jeong, Gi Seok; Choi, Yoon Young; Lee, Kwang Ho; Khademhosseini, Ali; Lee, Sang-Hoon

2011-09-04

Heterotypic functional materials with compositional and topographical properties that vary spatiotemporally on the micro- or nanoscale are common in nature. However, fabricating such complex materials in the laboratory remains challenging. Here we describe a method to continuously create microfibres with tunable morphological, structural and chemical features using a microfluidic system consisting of a digital, programmable flow control that mimics the silk-spinning process of spiders. With this method we fabricated hydrogel microfibres coded with varying chemical composition and topography along the fibre, including gas micro-bubbles as well as nanoporous spindle-knots and joints that enabled directional water collection. We also explored the potential use of the coded microfibres for tissue engineering applications by creating multifunctional microfibres with a spatially controlled co-culture of encapsulated cells.

[Attention and eye movements in human: psychophysiological concepts, neurophysiological models and EEG correlates].

PubMed

Slavutskaia, M V; Moiseeva, V V; Shul'govskiĭ, V V

2008-01-01

A review. Recently published articles concerning the problem of attention are discussed, the most popular psychophysiological concepts and neurophysiological models of attention are described, and correlation of spatial attention and saccadic eyes movements is shown. The evidence for reflection of attention mechanisms and saccade preparation in intensity and topography of the visual evoked potentials and event-related potentials is given. On the basis of the results obtained by the authors and literature data, the contribution of attention to preparation of a saccade and its programming is shown. Different kinds of attention are reflected in a complex of EEG potentials of various duration and polarity. The analysis of parameters and topography of these potentials can serve a tool for investigation of the attention mechanisms.

Calibration-free quantitative surface topography reconstruction in scanning electron microscopy.

PubMed

Faber, E T; Martinez-Martinez, D; Mansilla, C; Ocelík, V; Hosson, J Th M De

2015-01-01

This work presents a new approach to obtain reliable surface topography reconstructions from 2D Scanning Electron Microscopy (SEM) images. In this method a set of images taken at different tilt angles are compared by means of digital image correlation (DIC). It is argued that the strength of the method lies in the fact that precise knowledge about the nature of the rotation (vector and/or magnitude) is not needed. Therefore, the great advantage is that complex calibrations of the measuring equipment are avoided. The paper presents the necessary equations involved in the methods, including derivations and solutions. The method is illustrated with examples of 3D reconstructions followed by a discussion on the relevant experimental parameters. Copyright © 2014 Elsevier B.V. All rights reserved.

Geophysical techniques applied to urban planning in complex near surface environments. Examples of Zaragoza, NE Spain

NASA Astrophysics Data System (ADS)

Pueyo-Anchuela, Ó.; Casas-Sainz, A. M.; Soriano, M. A.; Pocoví-Juan, A.

Complex geological shallow subsurface environments represent an important handicap in urban and building projects. The geological features of the Central Ebro Basin, with sharp lateral changes in Quaternary deposits, alluvial karst phenomena and anthropic activity can preclude the characterization of future urban areas only from isolated geomechanical tests or from non-correctly dimensioned geophysical techniques. This complexity is here analyzed in two different test fields, (i) one of them linked to flat-bottomed valleys with irregular distribution of Quaternary deposits related to sharp lateral facies changes and irregular preconsolidated substratum position and (ii) a second one with similar complexities in the alluvial deposits and karst activity linked to solution of the underlying evaporite substratum. The results show that different geophysical techniques allow for similar geological models to be obtained in the first case (flat-bottomed valleys), whereas only the application of several geophysical techniques can permit to correctly evaluate the geological model complexities in the second case (alluvial karst). In this second case, the geological and superficial information permit to refine the sensitivity of the applied geophysical techniques to different indicators of karst activity. In both cases 3D models are needed to correctly distinguish alluvial lateral sedimentary changes from superimposed karstic activity.

Forecast skill of synoptic conditions associated with Santa Ana winds in Southern California

Treesearch

Charles Jones; Francis Fujioka; Leila M.V. Carvalho

2010-01-01

Santa Ana winds (SAW) are synoptically driven mesoscale winds observed in Southern California usually during late fall and winter. Because of the complex topography of the region, SAW episodes can sometimes be extremely intense and pose significant environmental hazards, especially during wildfire incidents. A simple set of criteria was used to identify synoptic-scale...

Epiphytic macrolichen indication of air quality and climate in interior forested mountains of the Pacific Northwest, USA

Treesearch

Heather T. Root; Linda H. Geiser; Sarah Jovan; Peter Neitlich

2015-01-01

Biomonitoring can provide cost-effective and practical information about the distribution of nitrogen(N) deposition, particularly in regions with complex topography and sparse instrumented monitoring sites. Because of their unique biology, lichens are very sensitive bioindicators of air quality. Lichens lack acuticle to control absorption or leaching of nutrients and...

Rainfall-Triggered Landslides Bury Sri Lankan Villages

NASA Technical Reports Server (NTRS)

Kirschbaum, Dalia; Stanley, Thomas

2016-01-01

On the afternoon of May 17th, 2016, a major landslide event caused at least 92 deaths, with 109 still missing*. The site was rated highly susceptible to landslides in a new global landslide susceptibility map. GPM precipitation data suggest that both antecedent and current rainfall as well as complex topography played a role in the slope failures.

Local atmospheric decoupling in complex topography alters climate change impacts

Treesearch

Christopher Daly; David R. Conklin; Michael H. Unsworth

2009-01-01

Cold air drainage and pooling occur in many mountain valleys, especially at night and during winter. Local climate regimes associated with frequent cold air pooling have substantial impacts on species phenology, distribution, and diversity. However, little is known about how the degree and frequency of cold air drainage and pooling will respond to a changing climate....

Subduction Related Crustal and Mantle Deformations and Their Implications for Plate Dynamics

NASA Astrophysics Data System (ADS)

Okeler, Ahmet

Ocean-continent convergence and subsequent continental collision are responsible for continental growth, mountain building, and severe tectonic events including volcanic eruptions and earthquake activity. They are also key driving forces behind the extensive thermal and compositional heterogeneities at crustal and mantle depths. Active subduction along the Calabrian Arc in southern Italy and the Hellenic Arc are examples of such collisional tectonics. The first part of this thesis examines the subduction related deformations within the crust beneath the southern Apennines. By modeling regional surface wave recordings of the largest temporary deployment in the southern Apennines, a lower-crustal/upper-mantle low-velocity volume extending down to 50 km beneath the mountain chain is identified. The magnitude (˜ 0.4 km/s slower) and anisotropic nature (˜ 10%) of the anomaly suggest the presence of hot and partially molten emplacement that may extend into the upper-crust towards Mt. Vulture, a once active volcano. Since the Apulian basement units are deformed during the compressional and consequent extensional events, our observations favor the "thick-skin" tectonic growth model for the region. In the deeper mantle, active processes are thermodynamically imprinted on the depth and strength of the phase transitions. This thesis examines more than 15000 SS precursors and provides the present-day reflectivity structure and topography associated with these phase transitions. Through case studies I present ample evidence for both slab penetration into the lower mantle (beneath the Hellenic Arc, Kurile Island and South America) and slab stagnation at the bottom of the Mantle Transition Zone (beneath the Tyrrhenian Sea and eastern China). Key findings include (1) thermal anomalies (˜ 200 K) at the base of the MTZ, which represent the deep source for Cenozoic European Rift Zone, Mount Etna and Mount Cameroon volcanism, (2) significant depressions (by 20-40 km) at the bottom of the Mantle Transition Zone beneath subducting slabs, (3) a strong 520-km reflector near subducting slabs, (4) a weak and elevated (15-25 km) 410-km reflector within active deformation zones, (5) strong lower mantle reflectors (˜ 900 km) while slabs penetrate into the lower mantle, and (6) consistency between the topography of a 300-km reflector and an exothermic phase transformation.

Inland notches micromorphology

NASA Astrophysics Data System (ADS)

Brook, Anna; Ben-Binyamin, Atzmon; Shtober-Zisu, Nurit

2017-04-01

Inland notches are well known phenomenon in Israel and can be found mostly along the mountainous backbone, developed in hard limestone or dolomite rocks within the Mediterranean climate zone and up to the desert fringe. LiDAR technology presents an opportunity to study the fine scale rock surface within the notch and its texture patterns. De-trending of the LiDAR reconstructed DEM to a local trend, surface roughness, was achieved by fitting a normalized surface to all measured ground points within the roughness neighborhood. Micro-topography plays an important role for modelling geomorphology dynamics, resulting in improved estimates for micro stream lines network and topographic erosion as well as mineral accumulation or deposition. Clearly, dissolution occurs whenever rock and solvent meet; thus water and moisture's crucial role in the decay of carbonate rocks results in texture and roughness variability. Study aims is to generate high resolution normalized DEM models using a terrestrial LiDAR, redefining the texture and roughness within the notch while assessing weathering processes caused by water. Plan curvature is the second derivative of slope taken perpendicular to its direction. It influences convergence and divergence of flow and it emphasizes the ridges and valleys across the surface. Concaved classified areas were tested against all planar curvature areas to distinguish them as unique areas based on their texture co-occurrence measures (GLCM). Overall negative curvature pixels show poor separability, in both TD and JM separation tests, while classes of curvature degree describe a positive trend showing medium and high concavity as unique areas. Study aims to link classified areas as the basic micro infrastructure for water flow, potential runoff flow and further accumulation of minerals. On the other hand, positive values of Plan curvature present the convexity of rock surface to imply diverging flow, thus describing the watershed line within the micro-topography. GLCM texture measure map distinct areas within the notch. Middle section of the notch has uniform texture neighborhood with relatively low mean elevation values (high values for homogeneity and energy). Bottom cavity of notch reveals a more chaotic texture, highlighting the spatial disorder with relatively high mean values. Entropy calculates how random the roughness values are, and as such, high values of this measure, at the cavity's bottom, suggest a potentially rapid erosion or disposition dynamics.

On the vertical structure and stability of the Lofoten vortex in the Norwegian Sea

NASA Astrophysics Data System (ADS)

Bashmachnikov, I. L.; Sokolovskiy, M. A.; Belonenko, T. V.; Volkov, D. L.; Isachsen, P. E.; Carton, X.

2017-10-01

The Lofoten Vortex (LV), a quasi-permanent anticyclonic eddy in the Lofoten Basin of the Norwegian Sea, is investigated with an eddy-permitting primitive equation model nested into the ECCO2 ocean state estimate. The LV, as simulated by the model, extends from the sea surface to the ocean bottom at about 3000 m and has the subsurface core between 50 m and 1100 m depths. Above and below the vortex core the relative vorticity signal decreases in amplitude while the radius increases by as much as 25-30% relative to the values in the core. Analyzing the model run, we show that the vertical structure of the LV can be casted into four standard configurations, each of which forms a distinct cluster in the parameter space of potential vorticity anomalies in and above the LV core. The stability of the LV for each of the configurations is then studied with three-layer and a two-layer (in winter) quasi-geostrophic (QG) models over a flat bottom as well as over a realistic topography. The QG results show a number of common features with those of the primitive equation model. Thus, among the azimuthal modes dominating the LV instability, both the QG model and the primitive equation model show a major role the 2nd and 3rd modes. In the QG model simulations the LV is the subject of a rather strong dynamic instability, penetrating deep into the core. The results predict 50-95% volume loss from the vortex within 4-5 months. Such a drastic effect is not observed in the primitive equation model, where, for the same intensity of perturbations, only 10-30% volume loss during the same period is detected. Taking into account the gently sloping topography of the central part of the Lofoten basin and the mean flow in the QG model, brings the rate of development of instability close to that in the primitive equation model. Some remaining differences in the two models are discussed. Overall, the LV decay rate obtained in the models is slow enough for eddy mergers and convection to restore the thermodynamic properties of the LV, primarily re-building its potential energy anomaly. This justifies the quasi-permanent presence of the LV in the Lofoten Basin.

The Thermal Environment of the World's Highest Lake: Results from the First Field Season at Licancabur Volcano and Implications for Astrobiology

NASA Astrophysics Data System (ADS)

Hock, A. N.; Cabrol, N. A.; Grin, E. A.; Murbach, M.; Fike, D. A.; Grisby, B.; Paige, D. A.; McKay, C.; Chong, G.; Demergasso, C.; Friedmann, I.; Ocampo-Friedmann, R.; Kiss, K. T.; Grigorsky, I.; Devore, E.

2002-12-01

At 5916 meters above sea level, the crater lake of Licancabur volcano (22°50' S 67°53' W) is the highest lake in the world and remains largely unexplored. In particular, the physical environment of the lake is not well understood: in this part of the Andes, liquid water is uncommon above 17,000 feet (~5200 meters). Most high lakes of the region are permanently frozen, and according to one account, water was even poured and frozen for a building foundation (Rudolph 1955). However, the crater lake at Licancabur is ice covered only part of the year and has higher bottom water temperatures than predicted. Calculating the temperature of maximum density (as per Eklund 1983) suggests that bottom waters should be no warmer than 4 °C, while a high-altitude diving expedition measured them at 6 °C (Leach 1984). Here, we investigate the possibility that the bottom water temperature anomaly may be due to one or more of the following factors: 1) geothermal heating, 2) solar heating/greenhouse effect from ice cover, and 3) heating due to environment/local topography, especially seepage of heated groundwater from the crater walls. The role of geothermal heating in the energy budget of the Licancabur crater lake is estimated here using measurements of water column temperature and heat flux from the bottom sediments. We also present temperature data for the water column and bottom sediment, as well as profiles of the pH and total dissolved solids (TDS) as a function of depth. Dataloggers will also be placed in the lake and surrounding terrain to monitor the effects of solar UV flux and ice cover on the lake?s energy budget through the course of one year. Future work will continue to this end?to better understand a unique terrestrial environment in terms of its counterparts no Earth?but will also be applied to better understand the environment and history of analogous sites elsewhere in the solar system. In particular, the low temperature, low pressure, high UV environment atop Licancabur makes it a unique terrestrial analog to relict lacustrine environments (e.g. volcanic lakes, impact crater lakes, hot springs, etc.) that may have given refuge to life on Mars. Results from this and future field seasons will be applied to constrain models of martian impact crater lake cooling and to better target future astrobiological missions to Mars.

Complex Topographic Feature Ontology Patterns

USGS Publications Warehouse

Varanka, Dalia E.; Jerris, Thomas J.

2015-01-01

Semantic ontologies are examined as effective data models for the representation of complex topographic feature types. Complex feature types are viewed as integrated relations between basic features for a basic purpose. In the context of topographic science, such component assemblages are supported by resource systems and found on the local landscape. Ontologies are organized within six thematic modules of a domain ontology called Topography that includes within its sphere basic feature types, resource systems, and landscape types. Context is constructed not only as a spatial and temporal setting, but a setting also based on environmental processes. Types of spatial relations that exist between components include location, generative processes, and description. An example is offered in a complex feature type ‘mine.’ The identification and extraction of complex feature types are an area for future research.

Titania-polymeric powder coatings with nano-topography support enhanced human mesenchymal cell responses.

PubMed

Mozumder, Mohammad Sayem; Zhu, Jesse; Perinpanayagam, Hiran

2012-10-01

Titanium implant osseointegration is dependent on the cellular response to surface modifications and coatings. Titania-enriched nanocomposite polymeric resin coatings were prepared through the application of advanced ultrafine powder coating technology. Their surfaces were readily modified to create nano-rough (<100 nm) surface nano-topographies that supported human embryonic palatal mesenchymal cell responses. Energy dispersive x-ray spectroscopy confirmed continuous and homogenous coatings with a similar composition and even distribution of titanium. Scanning electron microscopy (SEM) showed complex micro-topographies, and atomic force microscopy revealed intricate nanofeatures and surface roughness. Cell counts, mitochondrial enzyme activity reduction of yellow 3-(4,5-dimethythiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) to dark purple, SEM, and inverted fluorescence microscopy showed a marked increase in cell attachment, spreading, proliferation, and metabolic activity on the nanostructured surfaces. Reverse Transcription- Polymerase Chain Reaction (RT-PCR) analysis showed that type I collagen and Runx2 expression were induced, and Alizarin red staining showed that mineral deposits were abundant in the cell cultures grown on nanosurfaces. This enhancement in human mesenchymal cell attachment, growth, and osteogenesis were attributed to the nanosized surface topographies, roughness, and moderate wetting characteristics of the coatings. Their dimensional similarity to naturally occurring matrix proteins and crystals, coupled with their increased surface area for protein adsorption, may have facilitated the response. Therefore, this application of ultrafine powder coating technology affords highly biocompatible surfaces that can be readily modified to accentuate the cellular response. Copyright © 2012 Wiley Periodicals, Inc.

Accurate elevation and normal moveout corrections of seismic reflection data on rugged topography

USGS Publications Warehouse

Liu, J.; Xia, J.; Chen, C.; Zhang, G.

2005-01-01

The application of the seismic reflection method is often limited in areas of complex terrain. The problem is the incorrect correction of time shifts caused by topography. To apply normal moveout (NMO) correction to reflection data correctly, static corrections are necessary to be applied in advance for the compensation of the time distortions of topography and the time delays from near-surface weathered layers. For environment and engineering investigation, weathered layers are our targets, so that the static correction mainly serves the adjustment of time shifts due to an undulating surface. In practice, seismic reflected raypaths are assumed to be almost vertical through the near-surface layers because they have much lower velocities than layers below. This assumption is acceptable in most cases since it results in little residual error for small elevation changes and small offsets in reflection events. Although static algorithms based on choosing a floating datum related to common midpoint gathers or residual surface-consistent functions are available and effective, errors caused by the assumption of vertical raypaths often generate pseudo-indications of structures. This paper presents the comparison of applying corrections based on the vertical raypaths and bias (non-vertical) raypaths. It also provides an approach of combining elevation and NMO corrections. The advantages of the approach are demonstrated by synthetic and real-world examples of multi-coverage seismic reflection surveys on rough topography. ?? The Royal Society of New Zealand 2005.

Cellular Scale Anisotropic Topography Guides Schwann Cell Motility

PubMed Central

Mitchel, Jennifer A.; Hoffman-Kim, Diane

2011-01-01

Directed migration of Schwann cells (SC) is critical for development and repair of the peripheral nervous system. Understanding aspects of motility specific to SC, along with SC response to engineered biomaterials, may inform strategies to enhance nerve regeneration. Rat SC were cultured on laminin-coated microgrooved poly(dimethyl siloxane) platforms that were flat or presented repeating cellular scale anisotropic topographical cues, 30 or 60 µm in width, and observed with timelapse microscopy. SC motion was directed parallel to the long axis of the topography on both the groove floor and the plateau, with accompanying differences in velocity and directional persistence in comparison to SC motion on flat substrates. In addition, feature dimension affected SC morphology, alignment, and directional persistence. Plateaus and groove floors presented distinct cues which promoted differential motility and variable interaction with the topographical features. SC on the plateau surfaces tended to have persistent interactions with the edge topography, while SC on the groove floors tended to have infrequent contact with the corners and walls. Our observations suggest the capacity of SC to be guided without continuous contact with a topographical cue. SC exhibited a range of distinct motile morphologies, characterized by their symmetry and number of extensions. Across all conditions, SC with a single extension traveled significantly faster than cells with more or no extensions. We conclude that SC motility is complex, where persistent motion requires cellular asymmetry, and that anisotropic topography with cellular scale features can direct SC motility. PMID:21949703

Channel representation in physically based models coupling groundwater and surface water: pitfalls and how to avoid them.

PubMed

Käser, Daniel; Graf, Tobias; Cochand, Fabien; McLaren, Rob; Therrien, René; Brunner, Philip

2014-01-01

Recent models that couple three-dimensional subsurface flow with two-dimensional overland flow are valuable tools for quantifying complex groundwater/stream interactions and for evaluating their influence on watershed processes. For the modeler who is used to defining streams as a boundary condition, the representation of channels in integrated models raises a number of conceptual and technical issues. These models are far more sensitive to channel topography than conventional groundwater models. On all spatial scales, both the topography of a channel and its connection with the floodplain are important. For example, the geometry of river banks influences bank storage and overbank flooding; the slope of the river is a primary control on the behavior of a catchment; and at the finer scale bedform characteristics affect hyporheic exchange. Accurate data on streambed topography, however, are seldom available, and the spatial resolution of digital elevation models is typically too coarse in river environments, resulting in unrealistic or undulating streambeds. Modelers therefore perform some kind of manual yet often cumbersome correction to the available topography. In this context, the paper identifies some common pitfalls, and provides guidance to overcome these. Both aspects of topographic representation and mesh discretization are addressed. Additionally, two tutorials are provided to illustrate: (1) the interpolation of channel cross-sectional data and (2) the refinement of a mesh along a stream in areas of high topographic variability. © 2014, National Ground Water Association.

Anisotropic dissipation of the global internal tide from a higher-order multiscale barotropic tidal simulation

NASA Astrophysics Data System (ADS)

Salehipour, Hesam; Peltier, W. Richard

2013-04-01

Increasing recognition of the importance of the diapycnal mixing induced by the dissipation of internal tides excited by the interaction of the barotropic tide with bottom topography has begun to attract increasing attention. The partition of the dissipation of the barotropic tide between that related to the internal tide and that related to bottom friction is also of considerable interest as this partition has been shown to shift significantly between the modern and Last Glacial Maximum tidal regimes [Griffiths and Peltier, 2008, 2009] . Ocean general circulation models, though clearly unable to explicitly resolve small scale mixing processes, currently rely on the introduction of an appropriate parameterization of the contribution to such mixing due to dissipation of the internal tidal. One widely-used parameterization of this kind (which is currently employed in POP2) is that proposed by Jayne and St. Laurent [GRL 2001] and is based on topographic roughness. This contrasts with the parameterization of Carrere and Lyard [GRL 2003] and Lyard [Ocean Dynamics, 2006] which also considers the flow direction with respect to the topographic features. Both of these parameterizations require the tuning of parameters to arrive at sensible tidal amplitudes. We have developed an original higher order barotropic tidal model based on the discontinuous Galerkin finite element method applied on global triangular grids [Salehipour et al., submitted to Ocean Modelling] in which we parameterize the energy conversion to baroclinic tides by introducing an anisotropic internal tide drag [Griffiths and Peltier GRL 2008, Griffiths and Peltier J Climate 2009] which also considers the time dependent angle of attack of the barotropic tidal flow on abyssal topographic features but requires no tuning parameters. The model is massively parallelized which enables very high resolution modeling of global barotropic tides as well as the implementation of local grid refinement. In this paper we will present maps of energy dissipation for different tidal constituents using grids with resolutions up to 1/18° in coastal regions as well as in areas with high gradients in the bottom topography. The discontinuous Galerkin formulation provides important energy conservation properties as well as enabling the accurate representation of sharp topographic gradients without smoothing, a feature well matched to the multi-scale problem of the dissipation of the internal tide. We will describe the detailed energy budgets delivered by this model under both modern and Last Glacial Maximum oceanographic conditions, including relative sea level and internal density stratification effects. The results of the simulations will be illustrated with global maps with enhanced resolution for the internal tidal dissipation which may be exploited in the parameterization of vertical mixing. We will use the reconstructed paleotopography of the ICE-5G model of Peltier [Annu. Rev. Earth Planet Sci. 2004] as well as the more recent refinement (ICE-6G) to compute the characteristics of the LGM tidal regime and will compare these characteristics to those of the modern ocean.

Topography Modeling in Atmospheric Flows Using the Immersed Boundary Method

NASA Technical Reports Server (NTRS)

Ackerman, A. S.; Senocak, I.; Mansour, N. N.; Stevens, D. E.

2004-01-01

Numerical simulation of flow over complex geometry needs accurate and efficient computational methods. Different techniques are available to handle complex geometry. The unstructured grid and multi-block body-fitted grid techniques have been widely adopted for complex geometry in engineering applications. In atmospheric applications, terrain fitted single grid techniques have found common use. Although these are very effective techniques, their implementation, coupling with the flow algorithm, and efficient parallelization of the complete method are more involved than a Cartesian grid method. The grid generation can be tedious and one needs to pay special attention in numerics to handle skewed cells for conservation purposes. Researchers have long sought for alternative methods to ease the effort involved in simulating flow over complex geometry.

Towards a physically-based multi-scale ecohydrological simulator for semi-arid regions

NASA Astrophysics Data System (ADS)

Caviedes-Voullième, Daniel; Josefik, Zoltan; Hinz, Christoph

2017-04-01

The use of numerical models as tools for describing and understanding complex ecohydrological systems has enabled to test hypothesis and propose fundamental, process-based explanations of the system system behaviour as a whole as well as its internal dynamics. Reaction-diffusion equations have been used to describe and generate organized pattern such as bands, spots, and labyrinths using simple feedback mechanisms and boundary conditions. Alternatively, pattern-matching cellular automaton models have been used to generate vegetation self-organization in arid and semi-arid regions also using simple description of surface hydrological processes. A key question is: How much physical realism is needed in order to adequately capture the pattern formation processes in semi-arid regions while reliably representing the water balance dynamics at the relevant time scales? In fact, redistribution of water by surface runoff at the hillslope scale occurs at temporal resolution of minutes while the vegetation development requires much lower temporal resolution and longer times spans. This generates a fundamental spatio-temporal multi-scale problem to be solved, for which high resolution rainfall and surface topography are required. Accordingly, the objective of this contribution is to provide proof-of-concept that governing processes can be described numerically at those multiple scales. The requirements for a simulating ecohydrological processes and pattern formation with increased physical realism are, amongst others: i. high resolution rainfall that adequately captures the triggers of growth as vegetation dynamics of arid regions respond as pulsed systems. ii. complex, natural topography in order to accurately model drainage patterns, as surface water redistribution is highly sensitive to topographic features. iii. microtopography and hydraulic roughness, as small scale variations do impact on large scale hillslope behaviour iv. moisture dependent infiltration as temporal dynamics of infiltration affects water storage under vegetation and in bare soil Despite the volume of research in this field, fundamental limitations still exist in the models regarding the aforementioned issues. Topography and hydrodynamics have been strongly simplified. Infiltration has been modelled as dependent on depth but independent of soil moisture. Temporal rainfall variability has only been addressed for seasonal rain. Spatial heterogenity of the topography as well as roughness and infiltration properties, has not been fully and explicitly represented. We hypothesize that physical processes must be robustly modelled and the drivers of complexity must be present with as much resolution as possible in order to provide the necessary realism to improve transient simulations, perhaps leading the way to virtual laboratories and, arguably, predictive tools. This work provides a first approach into a model with explicit hydrological processes represented by physically-based hydrodynamic models, coupled with well-accepted vegetation models. The model aims to enable new possibilities relating to spatiotemporal variability, arbitrary topography and representation of spatial heterogeneity, including sub-daily (in fact, arbitrary) temporal variability of rain as the main forcing of the model, explicit representation of infiltration processes, and various feedback mechanisms between the hydrodynamics and the vegetation. Preliminary testing strongly suggests that the model is viable, has the potential of producing new information of internal dynamics of the system, and allows to successfully aggregate many of the sources of complexity. Initial benchmarking of the model also reveals strengths to be exploited, thus providing an interesting research outlook, as well as weaknesses to be addressed in the immediate future.

Topography Estimation of the Core Mantle Boundary with ScS Reverberations and Diffraction Waves

NASA Astrophysics Data System (ADS)

Hein, B. E.; Nakata, N.

2017-12-01

In this study, we use the propagation of global seismic waves to study the Core Mantle Boundary (CMB). We focus on the use of S-wave reflections at the CMB (ScS reverberations) and outer-core diffracted waves. It is difficult imaging the CMB with the ScS wave because the complexity of the structure in the near surface ( 50 km); the complex structure degrades the signal-to-noise ratio of of the ScS. To avoid estimating the structure in the crust, we rely on the concept of seismic interferometry to extract wave propagation through mantle, but not through the crust. Our approach is compute the deconvolution between the ScS (and its reverberation) and direct S waves generated by intermediate to deep earthquakes (>50 km depth). Through this deconvolution, we have the ability to filter out the direct S wave and retrieve the wave field propagating from only the hypocenter to the outer core, but not between the hypocenter to the receiver. After the deconvolution, we can isolate the CMB reflected waves from the complicated wave phenomena because of the near-surface structure. Utilizing intermediate and deep earthquakes is key since we can suppress the near-surface effect from the surface to the hypocenter of the earthquakes. The variation of such waves (e.g., travel-time perturbation and/or wavefield decorrelation) at different receivers and earthquakes provides the information of the topography of the CMB. In order to get a more detailed image of the topography of the CMB we use diffracted seismic waves such as Pdiff , Sdiff, and P'P'. By using two intermediate to deep earthquakes on a great circle path with a station we can extract the wave propagation between the two earthquakes to simplify the waveform, similar to how it is preformed using the ScS wave. We generate more illumination of the CMB by using diffracted waves rather than only using ScS reverberations. The accurate topography of CMB obtained by these deconvolution analyses may provide new insight of the dynamics of the Earth such as heat flow at the CMB and through the mantle.

Simultaneous noncontact topography and electrochemical imaging by SECM/SICM featuring ion current feedback regulation.

PubMed

Takahashi, Yasufumi; Shevchuk, Andrew I; Novak, Pavel; Murakami, Yumi; Shiku, Hitoshi; Korchev, Yuri E; Matsue, Tomokazu

2010-07-28

We described a hybrid system of scanning electrochemical microscopy (SECM) and scanning ion conductance microscopy (SICM) with ion current feedback nanopositioning control for simultaneous imaging of noncontact topography and spatial distribution of electrochemical species. A nanopipette/nanoring electrode probe provided submicrometer resolution of the electrochemical measurement on surfaces with complex topology. The SECM/SICM probe had an aperture radius of 220 nm. The inner and outer radii of the SECM Au nanoring electrode were 330 and 550 nm, respectively. Characterization of the probe was performed with scanning electron microscopy (SEM), cyclic voltammetry (CV), and approach curve measurements. SECM/SICM was applied to simultaneous imaging of topography and electrochemical responses of enzymes (horse radish peroxidase (HRP) and glucose oxidase (GOD)) and single live cells (A6 cells, superior cervical ganglion (SCG) cells, and cardiac myocytes). The measurements revealed the distribution of activity of the enzyme spots on uneven surfaces with submicrometer resolution. SECM/SICM acquired high resolution topographic images of cells together with the map of electrochemical signals. This combined technique was also applied to the evaluation of the permeation property of electroactive species through cellular membranes.

Topography on a subcellular scale modulates cellular adhesions and actin stress fiber dynamics in tumor associated fibroblasts

NASA Astrophysics Data System (ADS)

Azatov, Mikheil; Sun, Xiaoyu; Suberi, Alexandra; Fourkas, John T.; Upadhyaya, Arpita

2017-12-01

Cells can sense and adapt to mechanical properties of their environment. The local geometry of the extracellular matrix, such as its topography, has been shown to modulate cell morphology, migration, and proliferation. Here we investigate the effect of micro/nanotopography on the morphology and cytoskeletal dynamics of human pancreatic tumor-associated fibroblast cells (TAFs). We use arrays of parallel nanoridges with variable spacings on a subcellular scale to investigate the response of TAFs to the topography of their environment. We find that cell shape and stress fiber organization both align along the direction of the nanoridges. Our analysis reveals a strong bimodal relationship between the degree of alignment and the spacing of the nanoridges. Furthermore, focal adhesions align along ridges and form preferentially on top of the ridges. Tracking actin stress fiber movement reveals enhanced dynamics of stress fibers on topographically patterned surfaces. We find that components of the actin cytoskeleton move preferentially along the ridges with a significantly higher velocity along the ridges than on a flat surface. Our results suggest that a complex interplay between the actin cytoskeleton and focal adhesions coordinates the cellular response to micro/nanotopography.

Investigating large-scale secondary circulations within impact crater topographies in a refractive index-matched facility

NASA Astrophysics Data System (ADS)

Blois, Gianluca; Kim, Taehoon; Bristow, Nathan; Day, Mackenzie; Kocurek, Gary; Anderson, William; Christensen, Kenneth

2017-11-01

Impact craters, common large-scale topographic features on the surface of Mars, are circular depressions delimited by a sharp ridge. A variety of crater fill morphologies exist, suggesting that complex intracrater circulations affect their evolution. Some large craters (diameter >10 km), particularly at mid latitudes on Mars, exhibit a central mound surrounded by circular moat. Foremost among these examples is Gale crater, landing site of NASA's Curiosity rover, since large-scale climatic processes early in in the history of Mars are preserved in the stratigraphic record of the inner mound. Investigating the intracrater flow produced by large scale winds aloft Mars craters is key to a number of important scientific issues including ongoing research on Mars paleo-environmental reconstruction and the planning of future missions (these results must be viewed in conjunction with the affects of radial katabatibc flows, the importance of which is already established in preceding studies). In this work we consider a number of crater shapes inspired by Gale morphology, including idealized craters. Access to the flow field within such geometrically complex topography is achieved herein using a refractive index matched approach. Instantaneous velocity maps, using both planar and volumetric PIV techniques, are presented to elucidate complex three-dimensional flow within the crater. In addition, first- and second-order statistics will be discussed in the context of wind-driven (aeolian) excavation of crater fill.

A multiscale modelling methodology applicable for regulatory purposes taking into account effects of complex terrain and buildings on pollutant dispersion: a case study for an inner Alpine basin.

PubMed

Oettl, D

2015-11-01

Dispersion modelling in complex terrain always has been challenging for modellers. Although a large number of publications are dedicated to that field, candidate methods and models for usage in regulatory applications are scarce. This is all the more true when the combined effect of topography and obstacles on pollutant dispersion has to be taken into account. In Austria, largely situated in Alpine regions, such complex situations are quite frequent. This work deals with an approach, which is in principle capable of considering both buildings and topography in simulations by combining state-of-the-art wind field models at the micro- (<1 km) and mesoscale γ (2-20 km) with a Lagrangian particle model. In order to make such complex numerical models applicable for regulatory purposes, meteorological input data for the models need to be readily derived from routine observations. Here, use was made of the traditional way to bin meteorological data based on wind direction, speed, and stability class, formerly mainly used in conjunction with Gaussian-type models. It is demonstrated that this approach leads to reasonable agreements (fractional bias < 0.1) between observed and modelled annual average concentrations in an Alpine basin with frequent low-wind-speed conditions, temperature inversions, and quite complex flow patterns, while keeping the simulation times within the frame of possibility with regard to applications in licencing procedures. However, due to the simplifications in the derivation of meteorological input data as well as several ad hoc assumptions regarding the boundary conditions of the mesoscale wind field model, the methodology is not suited for computing detailed time and space variations of pollutant concentrations.

Channel Bottom Morphology in the Deltaic Reach of the Song Hau (mekong) River Channel in Vietnam

NASA Astrophysics Data System (ADS)

Allison, M. A.; Weathers, H. D., III; Meselhe, E. A.

2016-02-01

Boat-based, channel bathymetry and bankline elevation studies were conducted in the tidal and estuarine Mekong River channel using multibeam bathymetry and LIDAR corrected for elevation by RTK satellite positioning. Two mapping campaigns, one at high discharge in October 2014 and one at low discharge in March 2015, were conducted in the lower 100 km reach of the Song Hau distributary channel to (1) examine bottom morphology and its relationship to sediment transport, and (2) to provide information to setup the grid for a multi-dimensional and reduced complexity models of channel hydrodynamics and sediment dynamics. Sand fields were identified in multibeam data by the presence of dunes that were as large as 2-4 m high and 40-80 m wavelength and by clean sands in bottom grabs. Extensive areas of sand at the head and toe of mid-channel islands displayed 10-25 m diameter circular pits that could be correlated with bucket dredge, sand mining activities observed at some of the sites. Large areas of the channel floor were relict (containing little or no modern sediment) in the high discharge campaign, identifiable by the presence of along channel erosional furrows and terraced outcrops along the channel floor and margins. Laterally extensive flat areas were also observed in the channel thalweg. Both these and the relict areas were sampled by bottom grab as stiff silty clays. Complex cross-channel combinations of these morphologies were observed in some transects, suggesting strong bottom steering of tidal and riverine currents. Relative to high discharge, transects above and below the salt penetration limit showed evidence of shallowing in the thalweg and adjacent sloping areas at low discharge in March 2015. This shallowing, combined with the reduced extent of sand fields and furrowed areas, and soft muds in grabs, suggests seasonal trapping of fine grained sediment is occurring by estuarine and tidal circulation.

Pelagic erosion and sedimentation north of Carnegie Ridge, eastern equatorial Pacific

NASA Astrophysics Data System (ADS)

Brooks, C. K.; Lyle, M. W.; Marcantonio, F.; Lewis, D. M.; Paul, C.

2011-12-01

The Carnegie Ridge is one of three bathymetric highs bounding the Panama Basin and is known to exhibit erosion and redeposition of pelagic sediments. The extent of erosion and redeposition was studied during the R/V Melville cruise MV1014 in November 2010 to compare with geochemical estimates of sediment focusing. The MV1014 cruise acquired geochemical, geological and geophysical data using multichannel 2-D seismic and 3.5 kHz sub-bottom profiler, swathmap bathymetry, coring, and water casts. The seismic reflection, digital sub-bottom profiler and swathmap bathymetry data were used to investigate biogenic sedimentary deposition in the Panama Basin and erosion from Carnegie Ridge. We compare the new geophysical results with drilling on ODP Leg 202, the NEMO-03 site survey cruise for Leg 202, an early survey from 1969 and other data compiled by Ecuadorian surveys. Areas of non-deposition and/or erosion include the bathymetric highs along the ridge, seamounts, and an area of interest, a valley located on the northwestern flank of the ridge. The valley encompasses 183 km2 and exhibits large scale erosion, cutting down through sediments deposited over the 10-million year life of this segment of the Carnegie Ridge. All other valleys located within the Carnegie Ridge study area demonstrate ample deposition with sedimentary packages ranging from 200-800m with an average value trending around 400m. Higher sediment deposition is found in basins to the north of the erosional valley but similar sedimentation is also found even further north, beyond intervening high topography. The thickest sediment deposit near the Carnegie Ridge is actually found on the southern flank of the ridge, more than 100 km to the south of the survey area. Digital chirp sub-bottom profiler data combined with high-resolution seismic illustrate changes in sedimentation and erosion on the Carnegie Ridge, highlighting the dynamic sedimentary environment.

Modelling climate change effects on benthos: Distributional shifts in the North Sea from 2001 to 2099

NASA Astrophysics Data System (ADS)

Weinert, Michael; Mathis, Moritz; Kröncke, Ingrid; Neumann, Hermann; Pohlmann, Thomas; Reiss, Henning

2016-06-01

In the marine realm, climate change can affect a variety of physico-chemical properties with wide-ranging biological effects, but the knowledge of how climate change affects benthic distributions is limited and mainly restricted to coastal environments. To project the response of benthic species of a shelf sea (North Sea) to the expected climate change, the distributions of 75 marine benthic species were modelled and the spatial changes in distribution were projected for 2099 based on modelled bottom temperature and salinity changes using the IPCC scenario A1B. Mean bottom temperature was projected to increase between 0.15 and 5.4 °C, while mean bottom salinity was projected to moderately increase by 1.7. The spatial changes in species distribution were modelled with Maxent and the direction and extent of these changes were assessed. The results showed a latitudinal northward shift for 64% of the species (maximum 109 km; brittle star Ophiothrix fragilis) and a southward shift for 36% (maximum 101 km; hermit crab Pagurus prideaux and the associated cloak anemone Adamsia carciniopados; 105 km). The relatively low rates of distributional shifts compared to fish or plankton species were probably influenced by the regional topography. The environmental gradients in the central North Sea along the 50 m depth contour might act as a 'barrier', possibly resulting in a compression of distribution range and hampering further shifts to the north. For 49 species this resulted in a habitat loss up to 100%, while only 11 species could benefit from the warming in terms of habitat gain. Particularly the benthic communities of the southern North Sea, where the strongest temperature increase was projected, would be strongly affected by the distributional changes, since key species showed northward shifts and high rates of habitat loss, with potential ramifications for the functioning of the ecosystem.

Long-term tilt and acceleration data from the Logatchev Hydrothermal Vent Field, Mid-Atlantic Ridge, measured by the Bremen Ocean Bottom Tiltmeter

NASA Astrophysics Data System (ADS)

Fabian, Marcus; Villinger, Heinrich

2008-07-01

Long-term seafloor deformations in the Logatchev Hydrothermal Vent Field (LHF) at the Mid-Atlantic Ridge are largely unexplored and unknown, even though the LHF has been the focus of international research for many years. As seafloor tilt and vertical acceleration provide key information about seafloor deformations, the Bremen Ocean Bottom Tiltmeter (OBT) was deployed in May 2005 at position 14°45'11.7″N, 44°58'47.0″W, 3035 m water depth in the LHF. The OBT recorded 384 days and was recovered in January 2007. Strong tilt steps and strong gradual tilt changes over less than a minute to days in the range of some 10 mrad and aligned mostly with the topography possibly indicate nearby mass movements like avalanches of bulk material due to local uplift or subsidence or may show tectonic activity. A vertically aligned high-resolution microelectromechanical systems (MEMS) accelerometer of type Servo K-Beam in the sensor package seems to be helpful to distinguish between tilt signals caused by a true rotation and fake tilt related to a transient translational motion of the OBT in a horizontal direction. Hodographs show elliptic motion patterns with about 1 mrad total tilt amplitude and distinct orientations of tilt toward hydrothermal vents. It is up to speculation whether the latter signals are related to hydrothermal fluid circulation. The amplitude spectra of these tilt signals and acceleration show discrete lines mostly between 0.1 and 50 mHz. The spectra show the periodic character of those signals and also proof that tides or bottom currents, which are known to show lower signal frequencies, or tremor, which generally has higher frequencies, are most likely not the reason. Compared with studies onshore and offshore, the LHF is most likely an area of strong and highly variable seafloor deformations.

Spatial and temporal variation of Shelf Water and its connection with Antarctic Bottom Water in Prydz Bay, East Antarctica

NASA Astrophysics Data System (ADS)

Sun, Y.; Shi, J.; Yuan, X.

2016-02-01

Hydrographic surveys from 1981 to 2015, instrumented seal data from 2004 to 2014, and mooring data were used to reveal spatial and temporal variation of Shelf Water (SW) and the connection between SW and Antarctic Bottom Water (AABW) in Prydz Bay. The basic spatial pattern of the SW properties was presented and 5 subregions were distinguished based on the pattern and the topography. The change of water masses and the processes on the shelf are investigated in these subregions. A high salinity SW(S>34.6) is observed in the central and northern part of the Amery Basin in summer, which is like to be caused by the Circumpolar Deep Water (CDW) intrusion, and the eddy activities could be the primary impact to the CDW intrusion. There could be less CDW intrusion in winter because of the ice cover in this subregion, which is supported by the mooring in Prydz Bay Channel. A high salinity SW is observed near the Mackenzie polynya in winter, which is caused by brine rejection in ice production process. But the high salinity SW seems unlikely to form the overflow denser SW and locally form AABW. A dense water mass with low salinity, low temperature and high oxygen was observed on the shelf break in the 70.5°E section, which could be caused by the Ice Shelf Water (ISW) export from Amery Shelf. According to the hydrographic data, the dense water can form overflow DSW and flow downslope to west, which can be observed in the bottom of slope near 1500m in the 70°E section. The water will form AABW if it can flow downslope to the deep basin and keep mixing with CDW, suggesting a new type of DSW overflow in Prydz Bay.

Titan's interior from Cassini-Huygens

NASA Astrophysics Data System (ADS)

Tobie, G.; Baland, R.-M.; Lefevre, A.; Monteux, J.; Cadek, O.; Choblet, G.; Mitri, G.

2013-09-01

The Cassini-Huygens mission has brought many informations about Titan that can be used to infer its interior structure: the gravity field coefficients (up to degree 3, [1]), the surface shape (up to degree 6, [2]), the tidal Love number [1], the electric field [3], and the orientation of its rotation axis [4]. The measured obliquity and gravity perturbation due to tides, as well as the electric field, are lines of evidence for the presence of an internal global ocean beneath the ice surface of Titan [5,1,3]. The observed surface shape and gravity can be used to further constrain the structure of the ice shell above the internal ocean. The presence of a significant topography associated with weak gravity anomalies indicates that deflections of internal interface or lateral density variations may exist to compensate the topography. To assess the sources of compensation, we consider interior models including interface deflections and/or density variations, which reproduces simultaneously the surface gravity and long-wavelength topography data [6]. Furthermore, in order to test the long-term mechanical stability of the internal mass anomalies, we compute the relaxation rate of each internal interface in response to surface mass load. We show that the topography can be explained either by defections of the ocean/ice interface or by density variations in an upper crust [6]. For non-perfectly compensated models of the outer ice shell, the present-day structure is stable only for a conductive layer above a relatively cold ocean (for bottom viscosity > 1016 Pa.s, T < 250 K). For perfectly compensated models, a convective ice shell is stable (with a bottom viscosity lower than 1015 Pas) if the source of compensation is due to density variations in the upper crust (2-3 km below the surface). In this case, deep gravity anomalies are required to explain the observed geoid. Our calculations show that the high pressure ice layer cannot be the source of the residual gravity anomalies. The existence of mass anomalies in the rocky core is a most likely explanation. However, as the observed geoid and topography are mostly sensitive to the lateral structure of the outer ice shell, no information can be retrieved on the ice shell thickness, ocean density and/or size of the rocky core. Constraints on these internal parameters can be obtained from the tidal Love number and the obliquity. To derive the possible density profile, the obliquity is computed from a Cassini state model for a satellite with an internal liquid layer, each layer having an ellipsoidal shape consistent with the measured surface shape and gravity field [7]. We show that, once the observed surface flattening is taken into account, the measured obliquity can be reproduced only for internal models with a dense ocean (between 1275 and 1350 kg.m-3) above a differentiated interior with a full separation of rock and ice [7]. We obtain normalized moments of inertia between 0.31 and 0.33, significantly lower than the expected hydrostatic value (0.34). The tidal Love number is also found to be mostly sensitive to the ocean density and to a lesser extent the ice shell thickness. By combining obliquity and tidal Love number constraints, we show that the thickness of the outer ice shell is at least 40 km and the ocean thickness is less than 100 km, with an averaged density of 1275-1350 kg.m-3. Such a high density indicates that the ocean may contain a significant fraction of salts. Our calculations also imply that there is a significant difference of flattening between the surface and the ice/ocean interface. This is possible only if the ice layer is viscous enough to limit relaxation, as indicated above. This is also consistent with an ocean enriched in salts for which the crystallization point can be several tens of degree below the crystallization point of pure water system. The elevated density (> 3800 kg.m-3) found for the rocky core further suggests that Titan might have a differentiated iron core. The rocky core is likely fully dehydrated at present, suggesting warm conditions during most of its evolution. All the water contained in the deep interior has probably been expelled to the outer regions, thus potentially explaining the salt enrichments.

Bottom-up construction of a superstructure in a porous uranium-organic crystal

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Peng; Vermeulen, Nicolaas A.; Malliakas, Christos D.

Bottom-up construction of highly intricate structures from simple building blocks remains one of the most difficult challenges in chemistry. We report a structurally complex, mesoporous uranium-based metal-organic framework (MOF) made from simple starting components. The structure comprises 10 uranium nodes and seven tricarboxylate ligands (both crystallographically nonequivalent), resulting in a 173.3-angstrom cubic unit cell enclosing 816 uranium nodes and 816 organic linkers—the largest unit cell found to date for any nonbiological material. The cuboctahedra organize into pentagonal and hexagonal prismatic secondary structures, which then form tetrahedral and diamond quaternary topologies with unprecedented complexity. This packing results in the formation ofmore » colossal icosidodecahedral and rectified hexakaidecahedral cavities with internal diameters of 5.0 nanometers and 6.2 nanometers, respectively—ultimately giving rise to the lowest-density MOF reported to date.« less

Programmable DNA tile self-assembly using a hierarchical sub-tile strategy.

PubMed

Shi, Xiaolong; Lu, Wei; Wang, Zhiyu; Pan, Linqiang; Cui, Guangzhao; Xu, Jin; LaBean, Thomas H

2014-02-21

DNA tile based self-assembly provides a bottom-up approach to construct desired nanostructures. DNA tiles have been directly constructed from ssDNA and readily self-assembled into 2D lattices and 3D superstructures. However, for more complex lattice designs including algorithmic assemblies requiring larger tile sets, a more modular approach could prove useful. This paper reports a new DNA 'sub-tile' strategy to easily create whole families of programmable tiles. Here, we demonstrate the stability and flexibility of our sub-tile structures by constructing 3-, 4- and 6-arm DNA tiles that are subsequently assembled into 2D lattices and 3D nanotubes according to a hierarchical design. Assembly of sub-tiles, tiles, and superstructures was analyzed using polyacrylamide gel electrophoresis and atomic force microscopy. DNA tile self-assembly methods provide a bottom-up approach to create desired nanostructures; the sub-tile strategy adds a useful new layer to this technique. Complex units can be made from simple parts. The sub-tile approach enables the rapid redesign and prototyping of complex DNA tile sets and tiles with asymmetric designs.

The Fishery Performance Indicators: A Management Tool for Triple Bottom Line Outcomes

PubMed Central

Anderson, James L.; Anderson, Christopher M.; Chu, Jingjie; Meredith, Jennifer; Asche, Frank; Sylvia, Gil; Smith, Martin D.; Anggraeni, Dessy; Arthur, Robert; Guttormsen, Atle; McCluney, Jessica K.; Ward, Tim; Akpalu, Wisdom; Eggert, Håkan; Flores, Jimely; Freeman, Matthew A.; Holland, Daniel S.; Knapp, Gunnar; Kobayashi, Mimako; Larkin, Sherry; MacLauchlin, Kari; Schnier, Kurt; Soboil, Mark; Tveteras, Sigbjorn; Uchida, Hirotsugu; Valderrama, Diego

2015-01-01

Pursuit of the triple bottom line of economic, community and ecological sustainability has increased the complexity of fishery management; fisheries assessments require new types of data and analysis to guide science-based policy in addition to traditional biological information and modeling. We introduce the Fishery Performance Indicators (FPIs), a broadly applicable and flexible tool for assessing performance in individual fisheries, and for establishing cross-sectional links between enabling conditions, management strategies and triple bottom line outcomes. Conceptually separating measures of performance, the FPIs use 68 individual outcome metrics—coded on a 1 to 5 scale based on expert assessment to facilitate application to data poor fisheries and sectors—that can be partitioned into sector-based or triple-bottom-line sustainability-based interpretative indicators. Variation among outcomes is explained with 54 similarly structured metrics of inputs, management approaches and enabling conditions. Using 61 initial fishery case studies drawn from industrial and developing countries around the world, we demonstrate the inferential importance of tracking economic and community outcomes, in addition to resource status. PMID:25946194

Saturation sampling for spatial variation in multiple air pollutants across an inversion-prone metropolitan area of complex terrain

PubMed Central

2014-01-01

Background Characterizing intra-urban variation in air quality is important for epidemiological investigation of health outcomes and disparities. To date, however, few studies have been designed to capture spatial variation during select hours of the day, or to examine the roles of meteorology and complex terrain in shaping intra-urban exposure gradients. Methods We designed a spatial saturation monitoring study to target local air pollution sources, and to understand the role of topography and temperature inversions on fine-scale pollution variation by systematically allocating sampling locations across gradients in key local emissions sources (vehicle traffic, industrial facilities) and topography (elevation) in the Pittsburgh area. Street-level integrated samples of fine particulate matter (PM2.5), black carbon (BC), nitrogen dioxide (NO2), sulfur dioxide (SO2), and ozone (O3) were collected during morning rush and probable inversion hours (6-11 AM), during summer and winter. We hypothesized that pollution concentrations would be: 1) higher under inversion conditions, 2) exacerbated in lower-elevation areas, and 3) vary by season. Results During July - August 2011 and January - March 2012, we observed wide spatial and seasonal variability in pollution concentrations, exceeding the range measured at regulatory monitors. We identified elevated concentrations of multiple pollutants at lower-elevation sites, and a positive association between inversion frequency and NO2 concentration. We examined temporal adjustment methods for deriving seasonal concentration estimates, and found that the appropriate reference temporal trend differs between pollutants. Conclusions Our time-stratified spatial saturation approach found some evidence for modification of inversion-concentration relationships by topography, and provided useful insights for refining and interpreting GIS-based pollution source indicators for Land Use Regression modeling. PMID:24735818

Fragmentation, topography, and forest age modulate impacts of drought on a tropical forested landscape in eastern Puerto Rico

NASA Astrophysics Data System (ADS)

Uriarte, M.; Schwartz, N.; Budsock, A.

2017-12-01

Naturally regenerating second-growth forests account for ca. 50% of tropical forest cover and provide key ecosystem services. Understanding climate impacts on these ecosystems is critical for developing effective mitigation programs. Differences in environmental conditions and landscape context from old-growth forests may exacerbate climate impacts on second-growth stands. Nearly 70% of forest regeneration is occurring in hilly, upland, or mountain regions; a large proportion of second-growth forests are also fragmented. The effects of drought at the landscape scale, however, and the factors that modulate landscape heterogeneity in drought impacts remain understudied. Heterogeneity in soil moisture, light, and temperature in fragmented, topographically complex landscapes is likely to influence climate impacts on these forests. We examine impacts of a severe drought in 2015 on a forested landscape in Puerto Rico using two anomalies in vegetation indices. The study landscape is fragmented and topographically complex and includes old- and second-growth forests. We consider how topography (slope, aspect), fragmentation (distance to forest edge, patch size), and forest age (old- vs second-growth) modulate landscape heterogeneity of drought impacts and recovery from drought. Drought impacts were more severe in second-growth forests than in old-growth stands. Both topography and forest fragmentation influences the magnitude of drought impacts. Forest growing in steep areas, south facing slopes, small patches, and closer to forest edges exhibited more marked responses to drought. Forest recovery from drought was greater in second-growth forests and south facing slopes but slower in small patches and closer to forest edges. These findings are congruent with studies of drought impacts on tree growth in the study region. Together these results demonstrate the need for a multi-scalar approach to the study of drought impacts on tropical forests.

Incorporating topography in a cellular automata model to simulate residents evacuation in a mountain area in China

NASA Astrophysics Data System (ADS)

Wang, Li; Liu, Mao; Meng, Bo

2013-02-01

In China, both the mountainous areas and the number of people who live in mountain areas occupy a significant proportion. When production accidents or natural disasters happen, the residents in mountain areas should be evacuated and the evacuation is of obvious importance to public safety. But it is a pity that there are few studies on safety evacuation in rough terrain. The particularity of the complex terrain in mountain areas, however, makes it difficult to study pedestrian evacuation. In this paper, a three-dimensional surface cellular automata model is proposed to numerically simulate the real time dynamic evacuation of residents. The model takes into account topographic characteristics (the slope gradient) of the environment and the biomechanics characteristics (weight and leg extensor power) of the residents to calculate the walking speed. This paper only focuses on the influence of topography and the physiological parameters are defined as constants according to a statistical report. Velocity varies with the topography. In order to simulate the behavior of a crowd with varying movement velocities, and a numerical algorithm is used to determine the time step of iteration. By doing so, a numerical simulation can be conducted in a 3D surface CA model. Moreover, considering residents evacuation around a gas well in a mountain area as a case, a visualization system for a three-dimensional simulation of pedestrian evacuation is developed. In the simulation process, population behaviors of congestion, queuing and collision avoidance can be observed. The simulation results are explained reasonably. Therefore, the model presented in this paper can realize a 3D dynamic simulation of pedestrian evacuation vividly in complex terrain and predict the evacuation procedure and evacuation time required, which can supply some valuable information for emergency management.

Saturation sampling for spatial variation in multiple air pollutants across an inversion-prone metropolitan area of complex terrain.

PubMed

Shmool, Jessie Lc; Michanowicz, Drew R; Cambal, Leah; Tunno, Brett; Howell, Jeffery; Gillooly, Sara; Roper, Courtney; Tripathy, Sheila; Chubb, Lauren G; Eisl, Holger M; Gorczynski, John E; Holguin, Fernando E; Shields, Kyra Naumoff; Clougherty, Jane E

2014-04-16

Characterizing intra-urban variation in air quality is important for epidemiological investigation of health outcomes and disparities. To date, however, few studies have been designed to capture spatial variation during select hours of the day, or to examine the roles of meteorology and complex terrain in shaping intra-urban exposure gradients. We designed a spatial saturation monitoring study to target local air pollution sources, and to understand the role of topography and temperature inversions on fine-scale pollution variation by systematically allocating sampling locations across gradients in key local emissions sources (vehicle traffic, industrial facilities) and topography (elevation) in the Pittsburgh area. Street-level integrated samples of fine particulate matter (PM2.5), black carbon (BC), nitrogen dioxide (NO2), sulfur dioxide (SO2), and ozone (O3) were collected during morning rush and probable inversion hours (6-11 AM), during summer and winter. We hypothesized that pollution concentrations would be: 1) higher under inversion conditions, 2) exacerbated in lower-elevation areas, and 3) vary by season. During July - August 2011 and January - March 2012, we observed wide spatial and seasonal variability in pollution concentrations, exceeding the range measured at regulatory monitors. We identified elevated concentrations of multiple pollutants at lower-elevation sites, and a positive association between inversion frequency and NO2 concentration. We examined temporal adjustment methods for deriving seasonal concentration estimates, and found that the appropriate reference temporal trend differs between pollutants. Our time-stratified spatial saturation approach found some evidence for modification of inversion-concentration relationships by topography, and provided useful insights for refining and interpreting GIS-based pollution source indicators for Land Use Regression modeling.

Are the circular, dark features on Comet Borrelly's surface albedo variations or pits?

USGS Publications Warehouse

Nelson, R.M.; Soderblom, L.A.; Hapke, B.W.

2004-01-01

The highest resolution images of Comet 19P/Borrelly show many dark features which, upon casual inspection, appear to be low albedo markings, but which may also be shadows or other photometric variations caused by a depression in the local topography. In order to distinguish between these two possible interpretations we conducted a photometric analysis of three of the most prominent of these features using six of the highest quality images from the September 22, 2001 Deep Space 1 (DS1) flyby. We find that: 1. The radiance in the darkest parts of each feature increases as phase angle decreases, similarly to the radiance behavior of the higher albedo surrounding terrain. The dark features could be either fully illuminated low albedo spots or, alternatively, they could be depressions. No part of any of the three regions was in full shadow. 2. One of the regions has a radiance profile consistent with a rimmed depression, the second, with a simple depression with no rim, and the third with a low albedo spot. 3. The regolith particles are backscattering and carbon black is one of the few candidate regolith materials that might explain this low albedo. We conclude that Borrelly's surface is geologically complex to the limit of resolution of the images with a combination complex topography, pits, troughs, peaks and ridges, and some very dark albedo markings, perhaps a factor of two to three darker than the average 3-4% albedo of the surrounding terrains. Our technique utilizing measured radiance profiles through the dark regions is able to discriminate between rimmed depressions, rimless depressions and simple albedo changes not associated with topography. ?? 2003 Elsevier Inc. All rights reserved.

Complex inner core boundary from frequency characteristics of the reflection coefficients of PKiKP waves observed by Hi-net

NASA Astrophysics Data System (ADS)

Tanaka, Satoru; Tkalčić, Hrvoje

2015-12-01

Frequency-dependent reflection coefficients of P waves at the inner core boundary (ICB) are estimated from the spectral ratios of PKiKP and PcP waves observed by the high-sensitivity seismograph network (Hi-net) in Japan. The corresponding PKiKP reflection locations at the ICB are distributed beneath the western Pacific. At frequencies where noise levels are sufficiently low, spectra of reflection coefficients show four distinct sets of characteristics: a flat spectrum, a spectrum with a significant spectral hole at approximately 1 or 3 Hz, a spectrum with a strong peak at approximately 2 or 3 Hz, and a spectrum containing both a sharp peak and a significant hole. The variety in observed spectra suggests complex lateral variations in ICB properties. To explain the measured differences in frequency characteristics of ICB reflection coefficients, we conduct 2D finite difference simulations of seismic wavefields near the ICB. The models tested in our simulations include a liquid layer and a solid layer above the ICB, as well as sinusoidal and spike-shaped ICB topography with varying heights and scale lengths. We find that the existence of a layer above the ICB can be excluded as a possible explanation for the observed spectra. Furthermore, we find that an ICB topographic model with wavelengths and heights of several kilometers is too extreme to explain our measurements. However, restricting the ICB topography to wavelengths and heights of 1.0-1.5 km can explain the observed frequency-related phenomena. The existence of laterally varying topography may be a sign of lateral variations in inner core solidification.

Estimation of a Stopping Criterion for Geophysical Granular Flows Based on Numerical Experimentation

NASA Astrophysics Data System (ADS)

Yu, B.; Dalbey, K.; Bursik, M.; Patra, A.; Pitman, E. B.

2004-12-01

Inundation area may be the most important factor for mitigation of natural hazards related to avalanches, debris flows, landslides and pyroclastic flows. Run-out distance is the key parameter for inundation because the front deposits define the leading edge of inundation. To define the run-out distance, it is necessary to know when a flow stops. Numerical experiments are presented for determining a stopping criterion and exploring the suitability of a Savage-Hutter granular model for computing inundation areas of granular flows. The TITAN2D model was employed to run numerical experiments based on the Savage-Hutter theory. A potentially reasonable stopping criterion was found as a function of dimensionless average velocity, aspect ratio of pile, internal friction angle, bed friction angle and bed slope in the flow direction. Slumping piles on a horizontal surface and geophysical flows over complex topography were simulated. Several mountainous areas, including Colima volcano (MX), Casita (Nic.), Little Tahoma Peak (WA, USA) and the San Bernardino Mountains (CA, USA) were used to simulate geophysical flows. Volcanic block and ash flows, debris avalanches and debris flows occurred in these areas and caused varying degrees of damage. The areas have complex topography, including locally steep open slopes, sinuous channels, and combinations of these. With different topography and physical scaling, slumping piles and geophysical flows have a somewhat different dependence of dimensionless stopping velocity on power-law constants associated with aspect ratio of pile, internal friction angle, bed friction angle and bed slope in the flow direction. Visual comparison of the details of the inundation area obtained from the TITAN2D model with models that contain some form of viscous dissipation point out weaknesses in the model that are not evident by investigation of the stopping criterion alone.

Local Climate Changes Forced by Changes in Land Use and topography in the Aburrá Valley, Colombia.

NASA Astrophysics Data System (ADS)

Zapata Henao, M. Z.; Hoyos Ortiz, C. D.

2017-12-01

One of the challenges in the numerical weather models is the adequate representation of soil-vegetation-atmosphere interaction at different spatial scales, including scenarios with heterogeneous land cover and complex mountainous terrain. The interaction determines the energy, mass and momentum exchange at the surface and could affect different variables including precipitation, temperature and wind. In order to quantify the long-term climate impact of changes in local land use and to assess the role of topography, two numerical experiments were examined. The first experiment allows assessing the continuous growth of urban areas within the Aburrá Valley, a complex terrain region located in Colombian Andes. The Weather Research Forecast model (WRF) is used as the basis of the experiment. The basic setup involves two nested domains, one representing the continental scale (18 km) and the other the regional scale (2 km). The second experiment allows drastic topography modification, including changing the valley configuration to a plateau. The control run for both experiments corresponds to a climatological scenario. In both experiments the boundary conditions correspond to the climatological continental domain output. Surface temperature, surface winds and precipitation are used as the main variables to compare both experiments relative to the control run. The results of the first experiment show a strong relationship between land cover and the variables, specially for surface temperature and wind speed, due to the strong forcing land cover imposes on the albedo, heat capacity and surface roughness, changing temperature and wind speed magnitudes. The second experiment removes the winds spatial variability related with hill slopes, the direction and magnitude are modulated only by the trade winds and roughness of land cover.

Shelf-Slope Exchanges near Submarine Canyons in the Southern Mid-Atlantic Bight

NASA Astrophysics Data System (ADS)

Wang, H.; Gong, D.

2016-02-01

Shelf-slope exchange processes are major physical drivers of biological productivity near the shelf-break. Observations from two Slocum ocean gliders in Fall 2013 are used to explore the driving mechanisms of cross-shelf-slope exchanges near Norfolk Canyon and Washington Canyon in the southern Mid-Atlantic Bight. Offshore excursion of bottom "cold pool" water, and shoreward intrusion of slope water at surface layer and thermocline depth occurred during northeasterly along-shelf winds. The saline intrusions of surface slope water resided between the cold pool and surface shelf water, and reached the bottom on the outer and mid-shelf, while the offshore excursion of cold pool water was found between the surface and intermediate slope-water over the canyon. Ekman transport calculation shows wind-driven cross-shelf transport can partially explain this interleaving pattern of intrusions. Scaling analysis of double diffusive processes demonstrate that they also likely played a role in the cross-shelf-slope exchange. A unique canyon upwelling event was captured in and around Washington Canyon during a period of southwesterly along-shelf wind and along-shelf flow to the northeast. The water mass distributions and isopycnal responses in both along-canyon and cross-canyon transects are consistent with scaling analysis and numerical studies of canyon upwelling. Temperature-Salinity properties of water masses in the canyon suggest active mixing between shelf and slope water masses near the canyon head. These results point to the importance of wind, double diffusion, and canyon topography on shelf-slope exchange in the MAB.

Formation of undular bores and solitary waves in the Strait of Malacca caused by the 26 December 2004 Indian Ocean tsunami

NASA Astrophysics Data System (ADS)

Grue, J.; Pelinovsky, E. N.; Fructus, D.; Talipova, T.; Kharif, C.

2008-05-01

Deformation of the Indian Ocean tsunami moving into the shallow Strait of Malacca and formation of undular bores and solitary waves in the strait are simulated in a model study using the fully nonlinear dispersive method (FNDM) and the Korteweg-deVries (KdV) equation. Two different versions of the incoming wave are studied where the waveshape is the same but the amplitude is varied: full amplitude and half amplitude. While moving across three shallow bottom ridges, the back face of the leading depression wave steepens until the wave slope reaches a level of 0.0036-0.0038, when short waves form, resembling an undular bore for both full and half amplitude. The group of short waves has very small amplitude in the beginning, behaving like a linear dispersive wave train, the front moving with the shallow water speed and the tail moving with the linear group velocity. Energy transfer from long to short modes is similar for the two input waves, indicating the fundamental role of the bottom topography to the formation of short waves. The dominant period becomes about 20 s in both cases. The train of short waves, emerging earlier for the larger input wave than for the smaller one, eventually develops into a sequence of rank-ordered solitary waves moving faster than the leading depression wave and resembles a fission of the mother wave. The KdV equation has limited capacity in resolving dispersion compared to FNDM.

Study on the Variation of Groundwater Level under Time-varying Recharge

NASA Astrophysics Data System (ADS)

Wu, Ming-Chang; Hsieh, Ping-Cheng

2017-04-01

The slopes of the suburbs come to important areas by focusing on the work of soil and water conservation in recent years. The water table inside the aquifer is affected by rainfall, geology and topography, which will result in the change of groundwater discharge and water level. Currently, the way to obtain water table information is to set up the observation wells; however, owing to that the cost of equipment and the wells excavated is too expensive, we develop a mathematical model instead, which might help us to simulate the groundwater level variation. In this study, we will discuss the groundwater level change in a sloping unconfined aquifer with impermeable bottom under time-varying rainfall events. Referring to Child (1971), we employ the Boussinesq equation as the governing equation, and apply the General Integral Transforms Method (GITM) to analyzing the groundwater level after linearizing the Boussinesq equation. After comparing the solution with Verhoest & Troch (2000) and Bansal & Das (2010), we get satisfactory results. To sum up, we have presented an alternative approach to solve the linearized Boussinesq equation for the response of groundwater level in a sloping unconfined aquifer. The present analytical results combine the effect of bottom slope and the time-varying recharge pattern on the water table fluctuations. Owing to the limitation and difficulty of measuring the groundwater level directly, we develop such a mathematical model that we can predict or simulate the variation of groundwater level affected by any rainfall events in advance.

The Sinking and Spreading of The Antarctic Deep Ice Shelf Water In The Ross Sea Studied By In Situ Observaions and Numerical Modeling

NASA Astrophysics Data System (ADS)

Rubino, A.; Budillon, G.; Pierini, S.; Spezie, G.

The sinking and spreading of the Deep Ice Shelf Water (DISW) in the Ross Sea are analyzed using in situ observations and the results of a nonlinear, reduced-gravity, frontal layered numerical "plume" model which is able to simulate the motion of a bottom-arrested current over realistic topography. The model is forced by prescribing the thickness of the DISW vein as well as its density structure at the southern model boundary. The ambient temperature and salinity are imposed using hydrographic data acquired by the Italian PNRA-CLIMA project. In the model water of the quiescent ambient ocean is allowed to entrain in the active deep layer due to a simple param- eterization of turbulent mixing. The importance of forcing the model with a realistic ambient density is demonstrated by carrying out a numerical simulation in which the bottom active layer is forced using an idealized ambient density. In a more realis- tic simulation the path and the density structure of the DISW vein flowing over the Challenger Basin are obtained and are found to be in good agreement with data. The evolution of the deep current beyond the continental shelf is also simulated. It provides useful information on the water flow and mixing in a region of the Ross Sea where the paucity of experimental data does not allow for a detailed description of the deep ocean dynamics.

Deep and intermediate mediterranean water in the western Alboran Sea

NASA Astrophysics Data System (ADS)

Parrilla, Gregorio; Kinder, Thomas H.; Preller, Ruth H.

1986-01-01

Hydrographic and current meter data, obtained during June to October 1982, and numerical model experiments are used to study the distribution and flow of Mediterranean waters in the western Alboran Sea. The Intermediate Water is more pronounced in the northern three-fourths of the sea, but its distribution is patchy as manifested by variability of the temperature and salinity maxima at scales ≤10 km. Current meters in the lower Intermediate Water showed mean flow toward the Strait at 2 cm s -1. A reversal of this flow lasted about 2 weeks. A rough estimate of the mean westward Intermediate Water transport was 0.4 × 10 6 m 3 s -1, about one-third of the total outflow, so that the best estimates of the contributions of traditionally defined Intermediate Water and Deep Water account for only about one-half of the total outflow. The Deep Water was uplifted against the southern continental slope from Alboran Island (3°W) to the Strait. There was also a similar but much weaker banking against the Spanish slope, but a deep current record showed that the eastward recirculation implied by this banking is probably intermittent. Two-layer numerical model experiments simulated the Intermediate Water flow with a flat bottom and the Deep Water with realistic bottom topography. Both experiments replicated the major circulation features, and the Intermediate Water flow was concentrated in the north because of rotation and the Deep Water flow in the south because of topographic control.

The emergence of top-down proteomics in clinical research

PubMed Central

2013-01-01

Proteomic technology has advanced steadily since the development of 'soft-ionization' techniques for mass-spectrometry-based molecular identification more than two decades ago. Now, the large-scale analysis of proteins (proteomics) is a mainstay of biological research and clinical translation, with researchers seeking molecular diagnostics, as well as protein-based markers for personalized medicine. Proteomic strategies using the protease trypsin (known as bottom-up proteomics) were the first to be developed and optimized and form the dominant approach at present. However, researchers are now beginning to understand the limitations of bottom-up techniques, namely the inability to characterize and quantify intact protein molecules from a complex mixture of digested peptides. To overcome these limitations, several laboratories are taking a whole-protein-based approach, in which intact protein molecules are the analytical targets for characterization and quantification. We discuss these top-down techniques and how they have been applied to clinical research and are likely to be applied in the near future. Given the recent improvements in mass-spectrometry-based proteomics and stronger cooperation between researchers, clinicians and statisticians, both peptide-based (bottom-up) strategies and whole-protein-based (top-down) strategies are set to complement each other and help researchers and clinicians better understand and detect complex disease phenotypes. PMID:23806018

Resilience and vulnerability of permafrost to climate change

Treesearch

M.Torre Jorgenson; Vladimir Romanovsky; Jennifer Harden; Yuri Shur; Jonathan O' Donnell; Edward A.G. Schuur; Mikhail Kanevskiy; Sergei. Marchenko

2010-01-01

The resilience and vulnerability of permafrost to climate change depends on complex interactions among topography, water, soil, vegetation, and snow, which allow permafrost to persist at mean annual air temperatures (MAATs) as high as +2 °C and degrade at MAATs as low as -20°C. To assess these interactions, we compiled existing data and tested effects of varying...

Restoring dry and moist forests of the inland northwestern U.S.

Treesearch

Theresa B. Jain; Russell T. Graham

2005-01-01

The complex topography of the inland northwestern U.S. (58.4 million ha) interacts with continental and maritime air masses to create a highly variable climate, which results in a variety of forest settings. Historically (1850 to 1900), approximately 20% of the area was covered by dry forests (Pinus ponderosa, Pseudotsuga menziesii), and an estimated 18% was covered by...

Disturbance and topography shape nitrogen availability and ä15N over long-term forest succession

Treesearch

Steven S. Perakis; Alan J. Tepley; Jana E. Compton

2015-01-01

Forest disturbance and long-term succession towards old-growth are thought to increase nitrogen (N) availability and N loss, which should increase soil ä15N values. We examined soil and foliar patterns in N and ä15N, and soil N mineralization, across 800 years of forest succession in a topographically complex montane...

Diversity and Complexity: Becoming a Teacher in England in 2015-2016

ERIC Educational Resources Information Center

Whiting, Caroline; Whitty, Geoff; Menter, Ian; Black, Pat; Hordern, Jim; Parfitt, Anne; Reynolds, Kate; Sorensen, Nick

2018-01-01

This paper is based on a profile of Initial Teacher Training (ITT) provision in England, which was developed as part of a wider research programme on Diversity in Teacher Education (DiTE) based at Bath Spa University. It provides a new topography of routes to qualified teacher status (QTS) in England for the academic year 2015-2016, along similar…

Fire danger and fire behavior modeling systems in Australia, Europe, and North America

Treesearch

Francis M. Fujioka; A. Malcolm Gill; Domingos X. Viegas; B. Mike Wotton

2009-01-01

Wildland fire occurrence and behavior are complex phenomena involving essentially fuel (vegetation), topography, and weather. Fire managers around the world use a variety of systems to track and predict fire danger and fire behavior, at spatial scales that span from local to global extents, and temporal scales ranging from minutes to seasons. The fire management...

Airborne lidar-based estimates of tropical forest structure in complex terrain: opportunities and trade-offs for REDD+

Treesearch

Veronika Leitold; Michael Keller; Douglas C Morton; Bruce D Cook; Yosio E Shimabukuro

2015-01-01

Background: Carbon stocks and fluxes in tropical forests remain large sources of uncertainty in the global carbon budget. Airborne lidar remote sensing is a powerful tool for estimating aboveground biomass, provided that lidar measurements penetrate dense forest vegetation to generate accurate estimates of surface topography and canopy heights. Tropical forest areas...

High-resolution climate monitoring on a mountain island: the Saguaro National Park pilot study

Treesearch

Michael A. Crimmins

2005-01-01

A pilot project to identify climate monitoring needs within Saguaro National Park began in fall 2003. Nine weather stations were deployed across the complex topography of the park to provide insight into the spatial and temporal patterns of climate within the park management unit. This project will provide a valuable baseline for park management and may highlight...

Influence of volcanic history on groundwater patterns on the west slope of the Oregon High Cascades.

Treesearch

A. Jefferson; G. Grant; T. Rose

2006-01-01

Spring systems on the west slope of the Oregon High Cascades exhibit complex relationships among modern topography, lava flow geometries, and groundwater flow patterns. Seven cold springs were continuously monitored for discharge and temperature in the 2004 water year, and they were periodically sampled for ?18O, ?D, tritium, and dissolved noble gases. Anomalously high...

Effects of stream discharge, alluvial depth and bar amplitude on hyporheic flow in pool-riffle channels

Treesearch

Daniele Tonina; John M. Buffington

2011-01-01

Hyporheic flow results from the interaction between streamflow and channel morphology and is an important component of stream ecosystems because it enhances water and solute exchange between the river and its bed. Hyporheic flow in pool-riffle channels is particularly complex because of three-dimensional topography that spans a range of partially to fully submerged...

Simultaneous AFM topography and recognition imaging at the plasma membrane of mammalian cells.

PubMed

Chtcheglova, Lilia A; Hinterdorfer, Peter

2018-01-01

Elucidation the nano-organization of membrane proteins at/within the plasma membrane is probably the most demanding and still challenging task in cell biology since requires experimental approaches with nanoscale resolution. During last decade, atomic force microscopy (AFM)-based simultaneous topography and recognition imaging (TREC) has become a powerful tool to quickly obtain local receptor nano-maps on complex heterogeneous biosurfaces such as cells and membranes. Here we emphasize the TREC technique and explain how to unravel the nano-landscape of mammalian cells. We describe the procedures for all steps of the experiment including tip functionalization with ligand molecules, sample preparation, and localization of key molecules on the cell surface. We also discuss the current limitations and future perspectives of this technique. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

SRTM Anaglyph: Las Bayas, Argentina

NASA Technical Reports Server (NTRS)

2001-01-01

The interplay of volcanism, stream erosion and landslides is evident in this Shuttle Radar Topography Mission view of the eastern flank of the Andes Mountains, southeast of San Carlos de Bariloche, Argentina. Older lava flows emanating from the Andes once covered much of this area. Younger, local volcanoes (seen here as small peaks) then covered parts of the area with fresh, erosion resistant flows (seen here as very smooth surfaces). Subsequent erosion has created fine patterns on the older surfaces (bottom of the image) and bolder, irregular patterns through and around the younger surfaces (upper center and right center). Meanwhile, where a large stream immediately borders the resistant plateau (center of the image), lateral erosion has undercut the resistant plateau causing slivers of it to fall into the stream channel. This scene well illustrate show topographic data alone can reveal some aspects of recent geologic history.

This anaglyph was produced by first shading a preliminary elevation model from data acquired by the Shuttle Radar Topography Mission. The stereoscopic effect was then created by generating two differing perspectives, one for each eye. When viewed through special glasses, the result is a vertically exaggerated view of the Earth's surface in its full three dimensions. Anaglyph glasses cover the left eye with a red filter and cover the right eye with a blue filter.

Elevation data used in this image were acquired by the Shuttle Radar Topography Mission aboard the Space Shuttle Endeavour, launched on February 11, 2000. The mission used the same radar instrument that comprised the Spaceborne Imaging Radar-C/X-Band Synthetic Aperture Radar that flew twice on the Space Shuttle Endeavour in 1994. The Shuttle Radar Topography Mission was designed to collect three-dimensional measurements of the Earth's surface. To collect the 3-D data, engineers added a 60-meter-long (200-foot) mast, installed additional C-band and X-band antennas, and improved tracking and navigation devices. The mission is a cooperative project between NASA, the National Imagery and Mapping Agency of the U.S. Department of Defense, and the German and Italian space agencies. It is managed by NASA's Jet Propulsion Laboratory, Pasadena, CA, for NASA's Earth Science Enterprise, Washington, DC.

Size: 54.3 x 36.4 kilometers ( 33.7 x 22.6 miles) Location: 41.4 deg. South lat., 70.8 deg. West lon. Orientation: North toward the top Image Data: Shaded SRTM elevation model Date Acquired: February 2000

A Scalable Infrastructure for Lidar Topography Data Distribution, Processing, and Discovery

NASA Astrophysics Data System (ADS)

Crosby, C. J.; Nandigam, V.; Krishnan, S.; Phan, M.; Cowart, C. A.; Arrowsmith, R.; Baru, C.

2010-12-01

High-resolution topography data acquired with lidar (light detection and ranging) technology have emerged as a fundamental tool in the Earth sciences, and are also being widely utilized for ecological, planning, engineering, and environmental applications. Collected from airborne, terrestrial, and space-based platforms, these data are revolutionary because they permit analysis of geologic and biologic processes at resolutions essential for their appropriate representation. Public domain lidar data collection by federal, state, and local agencies are a valuable resource to the scientific community, however the data pose significant distribution challenges because of the volume and complexity of data that must be stored, managed, and processed. Lidar data acquisition may generate terabytes of data in the form of point clouds, digital elevation models (DEMs), and derivative products. This massive volume of data is often challenging to host for resource-limited agencies. Furthermore, these data can be technically challenging for users who lack appropriate software, computing resources, and expertise. The National Science Foundation-funded OpenTopography Facility (www.opentopography.org) has developed a cyberinfrastructure-based solution to enable online access to Earth science-oriented high-resolution lidar topography data, online processing tools, and derivative products. OpenTopography provides access to terabytes of point cloud data, standard DEMs, and Google Earth image data, all co-located with computational resources for on-demand data processing. The OpenTopography portal is built upon a cyberinfrastructure platform that utilizes a Services Oriented Architecture (SOA) to provide a modular system that is highly scalable and flexible enough to support the growing needs of the Earth science lidar community. OpenTopography strives to host and provide access to datasets as soon as they become available, and also to expose greater application level functionalities to our end-users (such as generation of custom DEMs via various gridding algorithms, and hydrological modeling algorithms). In the future, the SOA will enable direct authenticated access to back-end functionality through simple Web service Application Programming Interfaces (APIs), so that users may access our data and compute resources via clients other than Web browsers. In addition to an overview of the OpenTopography SOA, this presentation will discuss our recently developed lidar data ingestion and management system for point cloud data delivered in the binary LAS standard. This system compliments our existing partitioned database approach for data delivered in ASCII format, and permits rapid ingestion of data. The system has significantly reduced data ingestion times and has implications for data distribution in emergency response situations. We will also address on ongoing work to develop a community lidar metadata catalog based on the OGC Catalogue Service for Web (CSW) standard, which will help to centralize discovery of public domain lidar data.

Evaluation of fine soil moisture data from the IFloodS (NASA GPM) Ground Validation campaign using a fully-distributed ecohydrological model

NASA Astrophysics Data System (ADS)

Bastola, S.; Dialynas, Y. G.; Arnone, E.; Bras, R. L.

2014-12-01

The spatial variability of soil, vegetation, topography, and precipitation controls hydrological processes, consequently resulting in high spatio-temporal variability of most of the hydrological variables, such as soil moisture. Limitation in existing measuring system to characterize this spatial variability, and its importance in various application have resulted in a need of reconciling spatially distributed soil moisture evolution model and corresponding measurements. Fully distributed ecohydrological model simulates soil moisture at high resolution soil moisture. This is relevant for range of environmental studies e.g., flood forecasting. They can also be used to evaluate the value of space born soil moisture data, by assimilating them into hydrological models. In this study, fine resolution soil moisture data simulated by a physically-based distributed hydrological model, tRIBS-VEGGIE, is compared with soil moisture data collected during the field campaign in Turkey river basin, Iowa. The soil moisture series at the 2 and 4 inch depth exhibited a more rapid response to rainfall as compared to bottom 8 and 20 inch ones. The spatial variability in two distinct land surfaces of Turkey River, IA, reflects the control of vegetation, topography and soil texture in the characterization of spatial variability. The comparison of observed and simulated soil moisture at various depth showed that model was able to capture the dynamics of soil moisture at a number of gauging stations. Discrepancies are large in some of the gauging stations, which are characterized by rugged terrain and represented, in the model, through large computational units.