Effects of Isoprene- and Toluene-Generated Smog on Allergic Inflammation in Mice

EPA Science Inventory

Reactions of organic compounds with nitric oxide (NO) and sunlight produce complex mixtures of pollutants including secondary organic aerosol (SOA), ozone (O3), nitrogen dioxide (NO2), and reactive aldehydes. The health effects of these photochemical smog mixtures in susceptible ...

Herschel Observations of Extraordinary Sources: Analysi sof the HIFI 1.2 THz Wide Spectral Survey toward Orion KL II. Chemical Implications

NASA Astrophysics Data System (ADS)

Crockett, N. R.; Bergin, E. A.; Neill, J. L.; Favre, C.; Blake, G. A.; Herbst, E.; Anderson, D. E.; Hassel, G. E.

2015-06-01

We present chemical implications arising from spectral models fit to the Herschel/HIFI spectral survey toward the Orion Kleinmann-Low nebula (Orion KL). We focus our discussion on the eight complex organics detected within the HIFI survey utilizing a novel technique to identify those molecules emitting in the hottest gas. In particular, we find the complex nitrogen bearing species CH3CN, C2H3CN, C2H5CN, and NH2CHO systematically trace hotter gas than the oxygen bearing organics CH3OH, C2H5OH, CH3OCH3, and CH3OCHO, which do not contain nitrogen. If these complex species form predominantly on grain surfaces, this may indicate N-bearing organics are more difficult to remove from grain surfaces than O-bearing species. Another possibility is that hot (Tkin ∼ 300 K) gas phase chemistry naturally produces higher complex cyanide abundances while suppressing the formation of O-bearing complex organics. We compare our derived rotation temperatures and molecular abundances to chemical models, which include gas-phase and grain surface pathways. Abundances for a majority of the detected complex organics can be reproduced over timescales ≳105 years, with several species being underpredicted by less than 3σ. Derived rotation temperatures for most organics, furthermore, agree reasonably well with the predicted temperatures at peak abundance. We also find that sulfur bearing molecules that also contain oxygen (i.e., SO, SO2, and OCS) tend to probe the hottest gas toward Orion KL, indicating the formation pathways for these species are most efficient at high temperatures. Herschel is an ESA space observatory with science instruments provided by European-led Principal Investigator consortia and with important participation from NASA.

EPR Characterization of Dinitrosyl Iron Complexes with Thiol-Containing Ligands as an Approach to Their Identification in Biological Objects: An Overview.

PubMed

Vanin, Anatoly F

2018-06-01

The overview demonstrates how the use of only one physico-chemical approach, viz., the electron paramagnetic resonance method, allowed detection and identification of dinitrosyl iron complexes with thiol-containing ligands in various animal and bacterial cells. These complexes are formed in biological objects in the paramagnetic (electron paramagnetic resonance-active) mononuclear and diamagnetic (electron paramagnetic resonance-silent) binuclear forms and control the activity of nitrogen monoxide, one of the most universal regulators of metabolic processes in the organism. The analysis of electronic and spatial structures of dinitrosyl iron complex sheds additional light on the mechanism whereby dinitrosyl iron complex with thiol-containing ligands function in human and animal cells as donors of nitrogen monoxide and its ionized form, viz., nitrosonium ions (NO + ).

Aerobic degradation of 2,4,6-trinitrotoluene by Enterobacter cloacae PB2 and by pentaerythritol tetranitrate reductase

DOE Office of Scientific and Technical Information (OSTI.GOV)

French, C.E.; Bruce, N.C.; Nicklin, S.

1998-08-01

Enterobacter cloacae PB2 was originally isolated on the basis of its ability to utilize nitrate esters, such as pentaerythritol tetranitrate (PETN) and glycerol trinitrate, as the sole nitrogen source for growth. The enzyme responsible is an NADPH-dependent reductase designated PETN reductase. E. cloacae PB2 was found to be capable of slow aerobic growth with 2,4,6-trinitrotoluene (TNT) as the sole nitrogen source. Dinitrotoluenes were not produced and could not be used as nitrogen sources. Purified PETN reductase was found to reduce TNT to its hydride-Meisenheimer complex, which was further reduced to the dihydride-Meisenheimer complex. Purified PETN reductase and recombinant Escherichia colimore » expressing PETN reductase were able to liberate nitrogen as nitrite from TNT. The ability to remove nitrogen from TNT suggests that PB2 or recombinant organisms expressing PETN reductase may be useful for bioremediation of TNT-contaminated soil and water.« less

Influence of domestic pets on soil concentrations of dissolved organic carbon, nitrogen, and phosphorus under turfgrass in apartment complexes of Central Texas, USA

NASA Astrophysics Data System (ADS)

Steele, M.; Aitkenhead-Peterson, J. A.

2009-12-01

High nitrogen (N) and phosphorus (P) watershed loading rates increases the concentration and loads present in urban streams and rivers, resulting in eutrophication and degradation of surface water quality. Domestic pet animal feed may represent a significant proportion of nitrogen loading in urban watersheds, and because it is deposited directly on the watershed surface may have a large effect on N loads in urban surface waters (Baker et al. 2001). Animal manure has long been used to increase soil N and phosphorus concentrations for the purpose of growing agricultural crops; however, little is known about unintentional urban manuring resulting from a high density of domesticated pets. The purpose of this study is to determine if the presence of domesticated animals in high density urban developments results in increased concentrations of soil dissolved organic carbon (DOC), N, and P and the potential to contribute to loading of urban streams. Composite soil samples from the 0 to 5 cm and 5 to 10 cm soil depth were collected from apartment complexes in Bryan/College Station (BCS) and San Antonio, Texas during August, 2009. Apartment complexes were randomly located around the city and were chosen based on their rules regarding pet ownership. Four apartment complexes that allowed all domestic pets were compared to four that did not allow any domestic pets on the property. A 10:1 water extraction of field moist soil was conducted immediately after sampling. Soil water extracts were analyzed for DOC, total dissolved nitrogen (TDN), nitrate-N, ammonium-N, dissolved organic N, and orthophosphate-P. Results indicated significantly increased concentrations of DOC and N species at both depths in BCS apartments that allowed pets compared to those that did not; however, opposite trends were found in San Antonio. There is a trend for increased concentrations of orthophosphate-P at both locations. Baker, L.A., D. Hope, Y. Xu, et al. 2001. Nitrogen balance for the central Arizona-Phoenix (CAP) ecosystem. Ecosystems 4: 582-602.

The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown-rot mechanism involving Fenton chemistry

PubMed Central

Rineau, Francois; Roth, Doris; Shah, Firoz; Smits, Mark; Johansson, Tomas; Canbäck, Björn; Olsen, Peter Bjarke; Persson, Per; Grell, Morten Nedergaard; Lindquist, Erika; Grigoriev, Igor V; Lange, Lene; Tunlid, Anders

2012-01-01

Soils in boreal forests contain large stocks of carbon. Plants are the main source of this carbon through tissue residues and root exudates. A major part of the exudates are allocated to symbiotic ectomycorrhizal fungi. In return, the plant receives nutrients, in particular nitrogen from the mycorrhizal fungi. To capture the nitrogen, the fungi must at least partly disrupt the recalcitrant organic matter–protein complexes within which the nitrogen is embedded. This disruption process is poorly characterized. We used spectroscopic analyses and transcriptome profiling to examine the mechanism by which the ectomycorrhizal fungus Paxillus involutus degrades organic matter when acquiring nitrogen from plant litter. The fungus partially degraded polysaccharides and modified the structure of polyphenols. The observed chemical changes were consistent with a hydroxyl radical attack, involving Fenton chemistry similar to that of brown-rot fungi. The set of enzymes expressed by Pa. involutus during the degradation of the organic matter was similar to the set of enzymes involved in the oxidative degradation of wood by brown-rot fungi. However, Pa. involutus lacked transcripts encoding extracellular enzymes needed for metabolizing the released carbon. The saprotrophic activity has been reduced to a radical-based biodegradation system that can efficiently disrupt the organic matter–protein complexes and thereby mobilize the entrapped nutrients. We suggest that the released carbon then becomes available for further degradation and assimilation by commensal microbes, and that these activities have been lost in ectomycorrhizal fungi as an adaptation to symbiotic growth on host photosynthate. The interdependence of ectomycorrhizal symbionts and saprophytic microbes would provide a key link in the turnover of nutrients and carbon in forest ecosystems. PMID:22469289

Adapting APSIM to model the physiology and genetics of complex adaptive traits in field crops.

PubMed

Hammer, Graeme L; van Oosterom, Erik; McLean, Greg; Chapman, Scott C; Broad, Ian; Harland, Peter; Muchow, Russell C

2010-05-01

Progress in molecular plant breeding is limited by the ability to predict plant phenotype based on its genotype, especially for complex adaptive traits. Suitably constructed crop growth and development models have the potential to bridge this predictability gap. A generic cereal crop growth and development model is outlined here. It is designed to exhibit reliable predictive skill at the crop level while also introducing sufficient physiological rigour for complex phenotypic responses to become emergent properties of the model dynamics. The approach quantifies capture and use of radiation, water, and nitrogen within a framework that predicts the realized growth of major organs based on their potential and whether the supply of carbohydrate and nitrogen can satisfy that potential. The model builds on existing approaches within the APSIM software platform. Experiments on diverse genotypes of sorghum that underpin the development and testing of the adapted crop model are detailed. Genotypes differing in height were found to differ in biomass partitioning among organs and a tall hybrid had significantly increased radiation use efficiency: a novel finding in sorghum. Introducing these genetic effects associated with plant height into the model generated emergent simulated phenotypic differences in green leaf area retention during grain filling via effects associated with nitrogen dynamics. The relevance to plant breeding of this capability in complex trait dissection and simulation is discussed.

Nitrogen-Rich Energetic Metal-Organic Framework: Synthesis, Structure, Properties, and Thermal Behaviors of Pb(II) Complex Based on N,N-Bis(1H-tetrazole-5-yl)-Amine

PubMed Central

Liu, Qiangqiang; Jin, Bo; Zhang, Qingchun; Shang, Yu; Guo, Zhicheng; Tan, Bisheng; Peng, Rufang

2016-01-01

The focus of energetic materials is on searching for a high-energy, high-density, insensitive material. Previous investigations have shown that 3D energetic metal–organic frameworks (E-MOFs) have great potential and advantages in this field. A nitrogen-rich E-MOF, Pb(bta)·2H2O [N% = 31.98%, H2bta = N,N-Bis(1H-tetrazole-5-yl)-amine], was prepared through a one-step hydrothermal reaction in this study. Its crystal structure was determined through single-crystal X-ray diffraction, Fourier transform infrared spectroscopy, and elemental analysis. The complex has high heat denotation (16.142 kJ·cm−3), high density (3.250 g·cm−3), and good thermostability (Tdec = 614.9 K, 5 K·min−1). The detonation pressure and velocity obtained through theoretical calculations were 43.47 GPa and 8.963 km·s−1, respectively. The sensitivity test showed that the complex is an impact-insensitive material (IS > 40 J). The thermal decomposition process and kinetic parameters of the complex were also investigated through thermogravimetry and differential scanning calorimetry. Non-isothermal kinetic parameters were calculated through the methods of Kissinger and Ozawa-Doyle. Results highlighted the nitrogen-rich MOF as a potential energetic material. PMID:28773805

Selective ionization of dissolved organic nitrogen by positive ion atmospheric pressure photoionization coupled with Fourier transform ion cyclotron resonance mass spectrometry.

PubMed

Podgorski, David C; McKenna, Amy M; Rodgers, Ryan P; Marshall, Alan G; Cooper, William T

2012-06-05

Dissolved organic nitrogen (DON) comprises a heterogeneous family of organic compounds that includes both well-known biomolecules such as urea or amino acids and more complex, less characterized compounds such as humic and fulvic acids. Typically, DON represents only a small fraction of the total dissolved organic carbon pool and therefore presents inherent problems for chemical analysis and characterization. Here, we demonstrate that DON may be selectively ionized by atmospheric pressure photionization (APPI) and characterized at the molecular level by Fourier transform ion cyclotron resonance mass spectrometry. Unlike electrospray ionization (ESI), APPI ionizes polar and nonpolar compounds, and ionization efficiency is not determined by polarity. APPI is tolerant to salts, due to the thermal treatment inherent to nebulization, and thus avoids salt-adduct formation that can complicate ESI mass spectra. Here, for dissolved organic matter from various aquatic environments, we selectively ionize DON species that are not efficiently ionized by other ionization techniques and demonstrate significant signal-to-noise increase for nitrogen species by use of APPI relative to ESI.

Synthesis and Characterization of Copper Complexes with a Tridentate Nitrogen-Donor Ligand: An Integrated Research Experiment for Undergraduate Students

ERIC Educational Resources Information Center

Bussey, Katherine A.; Cavalier, Annie R.; Connell, Jennifer R.; Mraz, Margaret E.; Holderread, Ashley S.; Oshin, Kayode D.; Pintauer, Tomislav

2015-01-01

An integrated laboratory experiment applying concepts and techniques developed in organic chemistry, inorganic chemistry, and instrumental analysis is presented for use by students interested in undergraduate research. The experiment incorporates some advanced laboratory practices such as multistep organic synthesis and purification, detailed…

The role of glutamine synthetase and glutamate dehydrogenase in nitrogen assimilation and possibilities for improvement in the nitrogen utilization of crops.

PubMed

Miflin, Ben J; Habash, Dimah Z

2002-04-01

This short review outlines the central role of glutamine synthetase (GS) in plant nitrogen metabolism and discusses some possibilities for crop improvement. GS functions as the major assimilatory enzyme for ammonia produced from N fixation, and nitrate or ammonia nutrition. It also reassimilates ammonia released as a result of photorespiration and the breakdown of proteins and nitrogen transport compounds. GS is distributed in different subcellular locations (chloroplast and cytoplasm) and in different tissues and organs. This distribution probably changes as a function of the development of the tissue, for example, GS1 appears to play a key role in leaf senescence. The enzyme is the product of multiple genes with complex promoters that ensure the expression of the genes in an organ- and tissue-specific manner and in response to a number of environmental variables affecting the nutritional status of the cell. GS activity is also regulated post-translationally in a manner that involves 14-3-3 proteins and phosphorylation. GS and plant nitrogen metabolism is best viewed as a complex matrix continually changing during the development cycle of plants. Along with GS, a number of other enzymes play key roles in maintaining the balance of carbon and nitrogen. It is proposed that one of these is glutamate dehydrogenase (GDH). There is considerable evidence for a GDH shunt to return the carbon in amino acids back into reactions of carbon metabolism and the tri-carboxylic acid cycle. Results with transgenic plants containing transferred GS genes suggest that there may be ways in which it is possible to improve the efficiency with which crop plants use nitrogen. Marker-assisted breeding may also bring about such improvements.

Strategies for efficiently selecting PHA producing mixed microbial cultures using complex feedstocks: Feast and famine regime and uncoupled carbon and nitrogen availabilities.

PubMed

Oliveira, Catarina S S; Silva, Carlos E; Carvalho, Gilda; Reis, Maria A

2017-07-25

Production of polyhydroxyalkanoates (PHAs) by open mixed microbial cultures (MMCs) has been attracting increasing interest as an alternative technology to PHA production by pure cultures, due to the potential for lower costs associated with the use of open systems (eliminating the requirement for sterile conditions) and the utilisation of cheap feedstock (industrial and agricultural wastes). Such technology relies on the efficient selection of an MMC enriched in PHA-accumulating organisms. Fermented cheese whey, a protein-rich complex feedstock, has been used previously to produce PHA using the feast and famine regime for selection of PHA accumulating cultures. While this selection strategy was found efficient when operated at relatively low organic loading rate (OLR, 2g-CODL -1 d -1 ), great instability and low selection efficiency of PHA accumulating organisms were observed when higher OLR (ca. 6g-CODL -1 d -1 ) was applied. High organic loading is desirable as a means to enhance PHA productivity. In the present study, a new selection strategy was tested with the aim of improving selection for high OLR. It was based on uncoupling carbon and nitrogen supply and was implemented and compared with the conventional feast and famine strategy. For this, two selection reactors were fed with fermented cheese whey applying an OLR of ca. 8.5g-CODL -1 (with 3.8g-CODL -1 resulting from organic acids and ethanol), and operated in parallel under similar conditions, except for the timing of nitrogen supplementation. Whereas in the conventional strategy nitrogen and carbon substrates were added simultaneously at the beginning of the cycle, in the uncoupled substrates strategy, nitrogen addition was delayed to the end of the feast phase (i.e. after exogenous carbon was exhausted). The two different strategies selected different PHA-storing microbial communities, dominated by Corynebacterium and a Xantomonadaceae, respectively with the conventional and the new approaches. The new strategy originated a more efficient PHA-production process than the conventional one (global PHA productivity of 6.09g-PHAL -1 d -1 and storage yield of 0.96 versus 2.55g-PHAL -1 d -1 and 0.86, respectively). Dissociation between the feast to famine length ratio (F/F) and storage efficiency was shown to be possible with the new strategy, allowing selection of an efficient PHA-storing culture with complex feedstock under high organic loading rates. Copyright © 2016 Elsevier B.V. All rights reserved.

[Vertical Distribution Characteristics of Typical Forest Soil Organic Nitrogen in Dawei Mountain].

PubMed

Ding, Xian-qing; Ma, Hui-jing; Zhu, Xiao-long; Chen, Shan; Hou, Hong-bo; Peng, Pei-qin

2015-10-01

To clarify altitudinal gradient of subtropical forest soil total nitrogen and organic nitrogen, soil samples were collected per 10 cm on soil profile (0-100 cm) in Dawei Mountain, researched the variation of soil organic nitrogen and correlation with soil physical and chemical properties. The results showed that: (1) Total nitrogen, acid hydrolysable organic nitrogen and soluble organic nitrogen decreased with the increase of depth, content of each component in mountain granite yellow-brown soils was much higher affected by altitude; (2) The average percentage of soil organic nitrogen to total nitrogen was 97.39% ± 1.17%, and soil acid hydrolysable organic nitrogen was 64.38% ± 10.68%, each component decreased with the increase of soil depth; (3) Soil soluble organic nitrogen content was 9.92- 23.45 mg x kg(-1), free amino acids (1.62 - 12.02 mg x kg(-1)) accounted for about 27.36% ± 9.95% of soluble organic nitrogen; (4) Soil acid hydrolysable organic nitrogen and soluble organic nitrogen were significantly positively correlated with total nitrogen, total soluble nitrogen and inorganic nitrogen (P < 0.05), were highly significantly correlated with soil bulk density, organic carbon, and total phosphorus (P < 0.01). Organic nitrogen was the main body of soil nitrogen in typical subtropical forest, each component showed a downward trend increase with soil depth affected by altitude and soil physical and chemical properties. There was a close conversion relationship between soil organic nitrogen and other nitrogen forms, the characteristics of soil organic nitrogen will have profound impact on nitrogen cycling of forest ecological system.

A Forty Year Odyssey in Metallo-Organic Chemistry.

PubMed

Nicholas, Kenneth M

2015-07-17

In this invited Perspective, I provide a personal account highlighting several of my group's research contributions in metallo-organic chemistry over the past 40 years. Our early work focused primarily in stoichiometric structure/reactivity of transition metal-organic compounds and their use in organic synthesis. More recent efforts have centered on the discovery and development of new metal-catalyzed organic reactions via reactive metal-organic intermediates. The major research findings that are described here include (1) propargyl-cobalt complexes as electrophilic agents for C-C and C-Nu coupling; (2) the activation of carbon dioxide by metal complexes; (3) metal-promoted C-H nitrogenation reactions; (4) oxo-metal catalyzed deoxygenation reactions; and (5) catalyst discovery via dynamic templating with substrate- and transition-state analogues.

Synthesis, Structure, Characterization, and Decomposition of Nickel Dithiocarbamates: Effect of Precursor Structure and Processing Conditions on Solid-State Products

NASA Technical Reports Server (NTRS)

Hepp, Aloysius F.; Kulis, Michael J.; McNatt, Jeremiah S.; Duffy, Norman V.; Hoops, Michael D.; Gorse, Elizabeth; Fanwick, Philip E.; Masnovi, John; Cowen, Jonathan E.; Dominey, Raymond N.

2016-01-01

Single-crystal X-ray structures of four nickel dithiocarbamate complexes, the homoleptic mixed-organic bis-dithiocarbamates Ni[S2CN(isopropyl)(benzyl)]2, Ni[S2CN(ethyl)(n-butyl)]2, and Ni[S2CN(phenyl)(benzyl)]2, as well as the heteroleptic mixed-ligand complex NiCl[P(phenyl)3][(S2CN(phenyl)(benzyl)], were determined. Synthetic, spectroscopic, structural, thermal, and sulfide materials studies are discussed in light of prior literature. The spectroscopic results are routine. A slightly distorted square-planar nickel coordination environment was observed for all four complexes. The organic residues adopt conformations to minimize steric interactions. Steric effects also may determine puckering, if any, about the nickel and nitrogen atoms, both of which are planar or nearly so. A trans-influence affects the Ni-S bond distances. Nitrogen atoms interact with the CS2 carbons with a bond order of about 1.5, and the other substituents on nitrogen display transoid conformations. There are no strong intermolecular interactions, consistent with prior observations of the volatility of nickel dithiocarbamate complexes. Thermogravimetric analysis of the homoleptic species under inert atmosphere is consistent with production of 1:1 nickel sulfide phases. Thermolysis of nickel dithiocarbamates under flowing nitrogen produced hexagonal or -NiS as the major phase; thermolysis under flowing forming gas produced millerite (-NiS) at 300 C, godlevskite (Ni9S8) at 325 and 350 C, and heazlewoodite (Ni3S2) at 400 and 450 C. Failure to exclude oxygen results in production of nickel oxide. Nickel sulfide phases produced seem to be primarily influenced by processing conditions, in agreement with prior literature. Nickel dithiocarbamate complexes demonstrate significant promise to serve as single-source precursors to nickel sulfides, a quite interesting family of materials with numerous potential applications.

Investigation of grass carp by-products from a fish farm in Vojvodina

NASA Astrophysics Data System (ADS)

Okanović, Đ.; Tasić, T.; Kormanjoš, Š.; Ikonić, P.; Šojić, B.; Pelić, M.; Ristić, M.

2017-09-01

The quantity of by-products obtained during grass carp primary processing and chemical characteristics of internal organs were investigated. The total average weight of byproducts was 783.69 g (36.99%) in relation to live body weight which was cca 2118.5 g. The by-product contributing the largest quantity to total live body weight was the head with 458.22 g (21.63% of live body weight), followed by complete internal organs and tail and fins, with weights of 198.03 g or 9.35% and 57.93 g or 2.73%, respectively. The chemical composition of internal organs from the grass carp was mostly water (65.55%), following by crude fats and crude proteins (17.47% and 13.35%, respectively). The low collagen content (13.43% of total crude protein) indicates the high nutritional quality of the protein content from internal organs. Nitrogenous complexes from the internal organs were predominantly proteins. Digestible nitrogen was approximately equal to total nitrogen (89.38%), indicating that all proteins of the internal organs had high biological value. Based on the results obtained, it can be concluded that carp internal organs could be important sources of proteins and fats, and thus, could be used in Serbia as a raw material for feed and technical fat production.

Characterization of bio-oil from induction-heating pyrolysis of food-processing sewage sludges using chromatographic analysis.

PubMed

Tsai, Wen-Tien; Lee, Mei-Kuei; Chang, Jeng-Hung; Su, Ting-Yi; Chang, Yuan-Ming

2009-05-01

In this study, gas chromatography-mass spectrometry (GC-MS) was used to analyze the pyrolytic bio-oils and gas fractions derived from the pyrolysis of industrial sewage sludges using induction-heating technique. The liquid products were obtained from the cryogenic condensation of the devolatilization fraction in a nitrogen atmosphere using a heating rate of 300 degrees C/min ranging from 25 to 500 degrees C. The analytical results showed that the pyrolysis bio-oils were very complex mixtures of organic compounds and contained a lot of nitrogenated and/or oxygenated compounds such as aliphatic hydrocarbons, phenols, pyridines, pyrroles, amines, ketones, and so on. These organic hydrocarbons containing nitrogen and/or oxygen should originate from the protein and nucleic acid textures of the microbial organisms present in the sewage sludge. The non-condensable devolatilization fractions were also composed of nitrogenated and oxygenated compounds, but contained small fractions of phenols, 1H-indoles, and fatty carboxylic acids. On the other hand, the compositions in the non-condensable gas products were principally carbon dioxide, carbon monoxide and methane analyzed by gas chromatography-thermal conductivity detector (GC-TCD).

Nitrogen sources affect productivity, desiccation tolerance and storage stability of Beauveria bassiana blastospores.

PubMed

Mascarin, G M; Kobori, N N; Jackson, M A; Dunlap, C A; Delalibera, Í

2018-03-01

Nitrogen is a critical element in industrial fermentation media. This study investigated the influence of various nitrogen sources on blastospore production, desiccation tolerance and storage stability using two strains of the cosmopolitan insect-pathogenic fungus Beauveria bassiana. Complex organic sources of nitrogen such as soy flour, autolysed yeast and cottonseed flour induced great numbers of blastospores after 2-3 days of fermentation, which also survived drying and remained viable (32-56% survival) after 9 months storage at 4°C, although variations were found between strains. Nitrogen availability in the form of free amino acids directly influenced blastospore production and resistance to desiccation. Increasing glucose and nitrogen concentrations up to 120 and 30 g l -1 , respectively, did not improve blastospore production but enhanced desiccation tolerance. Cell viability after drying and upon fast-rehydration was increased when ≥25 g acid-hydrolysed casein per litre was supplemented in the liquid culture medium. These findings indicate that low-cost complex nitrogen compounds are suitable to enhance yeast-like growth by B. bassiana with good desiccation tolerance and therefore support its further scale-up production as a mycoinsecticide. Nitrogen is the most expensive nutrient in liquid media composition, but this study underscores the feasibility of using low-cost nitrogen compounds composed mainly of agro-industrial by-products for rapid production of desiccation-tolerant B. bassiana blastospores by liquid culture fermentation. © 2018 The Society for Applied Microbiology.

Biochemical and physiological bases for the use of carbon and nitrogen isotopes in environmental and ecological studies

NASA Astrophysics Data System (ADS)

Ohkouchi, Naohiko; Ogawa, Nanako O.; Chikaraishi, Yoshito; Tanaka, Hiroyuki; Wada, Eitaro

2015-12-01

We review the biochemical and physiological bases of the use of carbon and nitrogen isotopic compositions as an approach for environmental and ecological studies. Biochemical processes commonly observed in the biosphere, including the decarboxylation and deamination of amino acids, are the key factors in this isotopic approach. The principles drawn from the isotopic distributions disentangle the complex dynamics of the biosphere and allow the interactions between the geosphere and biosphere to be analyzed in detail. We also summarize two recently examined topics with new datasets: the isotopic compositions of individual biosynthetic products (chlorophylls and amino acids) and those of animal organs for further pursuing the basis of the methodology. As a tool for investigating complex systems, compound-specific isotopic analysis compensates the intrinsic disadvantages of bulk isotopic signatures. Chlorophylls provide information about the particular processes of various photoautotrophs, whereas amino acids provide a precise measure of the trophic positions of heterotrophs. The isotopic distributions of carbon and nitrogen in a single organism as well as in the whole biosphere are strongly regulated, so that their major components such as amino acids are coordinated appropriately rather than controlled separately.

Adsorption of protein GlnB of Herbaspirillum seropedicae on Si(111) investigated by AFM and XPS.

PubMed

Lubambo, A F; Benelli, E M; Klein, J; Schreiner, W; Camargo, P C

2006-01-01

The protein GlnB-Hs (GlnB of Herbaspirillum seropedicae) in diazotroph micro-organisms signalizes levels of nitrogen, carbon, and energy for a series of proteins involved in the regulation of expression and control of the activity of nitrogenase complex that converts atmospheric nitrogen in ammonia, resulting in biological nitrogen fixation. Its structure has already been determined by X-ray diffraction, revealing a trimer of (36 kDa) with lateral cavities having hydrophilic boundaries. The interactions of GlnB-Hs with the well-known Si(111) surface were investigated for different incubation times, protein concentrations in initial solution, deposition conditions, and substrate initial state. The protein solution was deposited on Si(111) and dried under controlled conditions. An atomic force microscope operating in dynamic mode shows images of circular, linear, and more complex donut-shaped protein arrangement, and also filament types of organization, which vary from a few nanometers to micrometers. Apparently, the filament formation was favored because of protein surface polarity when in contact with the silicon surface, following some specific orientation. The spin-coating technique was successfully used to obtain more uniform surface covering.

Overcoming the “Oxidant Problem”: Strategies to Use O2 as the Oxidant in Organometallic C–H Oxidation Reactions Catalyzed by Pd (and Cu)

PubMed Central

Campbell, Alison N.; Stahl, Shannon S.

2012-01-01

Oxidation reactions are key transformations in organic chemistry because they can increase chemical complexity and incorporate heteroatom substituents into carbon-based molecules. This principle is manifested in the conversion of petrochemical feedstocks into commodity chemicals and in the synthesis of fine chemicals, pharmaceuticals, and other complex organic molecules. The utility and function of such molecules correlate directly with the presence and specific placement of oxygen and nitrogen heteroatoms and other functional groups within the molecules. PMID:22263575

Exobiology and the solar system: the Cassini mission to Titan.

PubMed

Raulin, F; Gautier, D; Ip, W H

1984-01-01

The recent Voyager mission and the simulation experiments in the laboratory suggest that a complex nitrogen-organic chemistry is occuring at the periphery of Titan. Thus, this satellite of Saturn appears as a privileged place in the solar system for the study of extraterrestrial organic chemistry which can be considered as part of Exobiology. Projects of space mission relating to Titan are already under investigation, in particular with the "CASSINI" proposal. The CASSINI project is a combination of a Saturn orbiter and a Titan probe mission. Such a mission would allow the first study "in situ" of a complex extraterrestrial organic chemistry in atmospheric phase.

Transport, speciation, toxicity, and treatability of highway stormwater discharged to receiving waters in Louisiana.

DOT National Transportation Integrated Search

2013-01-01

Stormwater from transportation land uses is a complex heterogeneous mixture of particulate matter, nutrients (phosphorus and nitrogen), heavy metals, inorganic, and organic compounds with variations in flow and mass loadings by orders of magnitude du...

Carbon-nitrogen-water interactions: is model parsimony fruitful?

NASA Astrophysics Data System (ADS)

Puertes, Cristina; González-Sanchis, María; Lidón, Antonio; Bautista, Inmaculada; Lull, Cristina; Francés, Félix

2017-04-01

It is well known that carbon and nitrogen cycles are highly intertwined and both should be explained through the water balance. In fact, in water-controlled ecosystems nutrient deficit is related to this water scarcity. For this reason, the present study compares the capability of three models in reproducing the interaction between the carbon and nitrogen cycles and the water cycle. The models are BIOME-BGCMuSo, LEACHM and a simple carbon-nitrogen model coupled to the hydrological model TETIS. Biome-BGCMuSo and LEACHM are two widely used models that reproduce the carbon and nitrogen cycles adequately. However, their main limitation is that these models are quite complex and can be too detailed for watershed studies. On the contrary, the TETIS nutrient sub-model is a conceptual model with a vertical tank distribution over the active soil depth, dividing it in two layers. Only the input of the added litter and the losses due to soil respiration, denitrification, leaching and plant uptake are considered as external fluxes. Other fluxes have been neglected. The three models have been implemented in an experimental plot of a semi-arid catchment (La Hunde, East of Spain), mostly covered by holm oak (Quercus ilex). Plant transpiration, soil moisture and runoff have been monitored daily during nearly two years (26/10/2012 to 30/09/2014). For the same period, soil samples were collected every two months and taken to the lab in order to obtain the concentrations of dissolved organic carbon, microbial biomass carbon, ammonium and nitrate. In addition, between field trips soil samples were placed in PVC tubes with resin traps and were left incubating (in situ buried cores). Thus, mineralization and nitrification accumulated fluxes for two months, were obtained. The ammonium and nitrate leaching accumulated for two months were measured using ion-exchange resin cores. Soil respiration was also measured every field trip. Finally, water samples deriving from runoff, were collected to obtain the concentrations of dissolved organic carbon, dissolved organic nitrogen, ammonium and nitrate. The comparison shows a better performance of the complex models reproducing carbon and nitrogen cycles. However, the TETIS nutrient sub-model, even simpler than BIOME-BGCMuSo and LEACHM, reproduces the water balance adequately and it obtains a suitable representation of the carbon and nitrogen cycles.

MICROWAVE-ASSISTED SYNTHESIS OF NITROGEN AND OXYGEN CONTAINING HETEROCYCLES IN AQUEOUS MEDIUM

EPA Science Inventory

Pharmaceutical scientists are required to generate diverse arrays of complex targets in short periods of time. A primary driver of organic chemistry is, therefore, the development of efficient and environmentally benign synthetic protocols. This can be achieved via the selection ...

Modulating Radiation Resistance: Novel Protection Paradigms Based on Defenses against Ionizing Radiation in the Extrempohile Deinococcus radiodurans

DTIC Science & Technology

2013-07-01

USA (2013); 2) Many environmental yeast are extremely radiation-resistant, accumulate nitrogenous Mn2+-Pi complexes, and highly resistant to...5 important in aerobic environments . Numerous organisms which accumulate “compatible solutes” fit this model, including representative archaea...cyanobacteria, lichens, alpine yeast, and tardigrades. 4.3 Knowns and Unknowns of Deinococcus Mn2+ Complexes It is worth reminding the reader

The pitcher plant Sarracenia purpurea can directly acquire organic nitrogen and short-circuit the inorganic nitrogen cycle.

PubMed

Karagatzides, Jim D; Butler, Jessica L; Ellison, Aaron M

2009-07-07

Despite the large stocks of organic nitrogen in soil, nitrogen availability limits plant growth in many terrestrial ecosystems because most plants take up only inorganic nitrogen, not organic nitrogen. Although some vascular plants can assimilate organic nitrogen directly, only recently has organic nitrogen been found to contribute significantly to the nutrient budget of any plant. Carnivorous plants grow in extremely nutrient-poor environments and carnivory has evolved in these plants as an alternative pathway for obtaining nutrients. We tested if the carnivorous pitcher plant Sarracenia purpurea could directly take up intact amino acids in the field and compared uptake of organic and inorganic forms of nitrogen across a gradient of nitrogen deposition. We hypothesized that the contribution of organic nitrogen to the nitrogen budget of the pitcher plant would decline with increasing nitrogen deposition. At sites in Canada (low nitrogen deposition) and the United States (high nitrogen deposition), individual pitchers were fed two amino acids, glycine and phenylalanine, and inorganic nitrogen (as ammonium nitrate), individually and in mixture. Plants took up intact amino acids. Acquisition of each form of nitrogen provided in isolation exceeded uptake of the same form in mixture. At the high deposition site, uptake of organic nitrogen was higher than uptake of inorganic nitrogen. At the low deposition site, uptake of all three forms of nitrogen was similar. Completeness of the associated detritus-based food web that inhabits pitcher-plant leaves and breaks down captured prey had no effect on nitrogen uptake. By taking up intact amino acids, Sarracenia purpurea can short-circuit the inorganic nitrogen cycle, thus minimizing potential bottlenecks in nitrogen availability that result from the plant's reliance for nitrogen mineralization on a seasonally reconstructed food web operating on infrequent and irregular prey capture.

Virtual Nitrogen Losses from Organic Food Production

NASA Astrophysics Data System (ADS)

Cattell Noll, L.; Galloway, J. N.; Leach, A. M.; Seufert, V.; Atwell, B.; Shade, J.

2015-12-01

Reactive nitrogen (Nr) is necessary for crop and animal production, but when it is lost to the environment, it creates a cascade of detrimental environmental impacts. The nitrogen challenge is to maximize the food production benefits of Nr, while minimizing losses to the environment. The first nitrogen footprint tool was created in 2012 to help consumers learn about the Nr losses to the environment that result from an individual's lifestyle choices. The nitrogen lost during food production was estimated with virtual nitrogen factors (VNFs) that quantify the amount of nitrogen lost to the environment per unit nitrogen consumed. Alternative agricultural systems, such as USDA certified organic farms, utilize practices that diverge from conventional production. In order to evaluate the potential sustainability of these alternative agricultural systems, our team calculated VNFs that reflect organic production. Initial data indicate that VNFs for organic grains and organic starchy roots are comparable to, but slightly higher than conventional (+10% and +20% respectively). In contrast, the VNF for organic vegetables is significantly higher (+90%) and the VNF for organic legumes is significantly lower (-90%). Initial data on organic meat production shows that organic poultry and organic pigmeat are comparable to conventional production (both <5% difference), but that the organic beef VNF is significantly higher (+30%). These data show that in some cases organic and conventional production are comparable in terms of nitrogen efficiency. However, since conventional production relies heavily on the creation of new reactive nitrogen (Haber-Bosch, biological nitrogen fixation) and organic production primarily utilizes already existing reactive nitrogen (manure, crop residue, compost), the data also show that organic production contributes less new reactive nitrogen to the environment than conventional production (approximately 70% less). Therefore, we conclude that on a local scale, nitrogen losses from organic production are comparable to conventional production, but that organic production introduces less new reactive nitrogen to the global pool.

Correlation Between Early-Stage Expansion and Spectral Emission of a Nanosecond Laser-Induced Plasma from Organic Material

DTIC Science & Technology

2008-01-01

atmosphere like ours (mix of nitrogen and oxygen) implies a more complex plasma chemistry . For example, one of these difficulties is the interpretation of...due to LSDW have also been observed. KEYWORDS Polymer ablation, Shadowgraphy, Time-resolved laser induced breakdown spectroscopy, Plasma ... chemistry , Organic materials analysis, Expansion of laser-induced plasma 1 INTRODUCTION Laser-Induced Breakdown Spectroscopy (LIBS) traditionally

Molybdenum compounds in organic synthesis

NASA Astrophysics Data System (ADS)

Khusnutdinov, R. I.; Oshnyakova, T. M.; Dzhemilev, U. M.

2017-02-01

The review presents the first analysis and systematic discussion of data published in the last 35-40 years on the use of molybdenum compounds and complexes in organic synthesis and catalysis of various ion coordination and radical reactions. Detailed account is given of the key trends in the use of molybdenum complexes as catalysts of alkene epoxidation and oxyketonation, oxidation of sulfur, nitrogen and phosphorus compounds, hydrosilylation of 1,3-dienes, ketones and aldehydes, hydrostannylation of acetylenes and hydrogermylation of norbornadienes. Considerable attention is paid to the description of new reactions and in situ generation of highly reactive hypohalites, ROX and HOX, induced by molybdenum complexes and the use of hypohalites in oxidative transformations. Data on the application of molybdenum complexes in well-known reactions are discussed, including Kharasch and Pauson-Khand reactions, allylic alkylation of C-nucleophiles, aminocarbonylation of halo derivatives and oligomerization of cyclic dienes, trienes, alkynes and 1,3-dienes. The last Section of the review considers 'unusual' organic reactions involving molybdenum compounds and complexes. The bibliography includes 257 references.

Determination of binding-dioxygen in dioxygen complexes by headspace gas chromatography.

PubMed

Wang, Wei; Feng, Shun; Li, Ya-ni; Wu, Meiying; Wang, Jide

2008-06-06

Dioxygen complexes play important roles in organisms' bodies, so the determination of binding-dioxygen has practical significance. A simple and robust method based on headspace gas chromatography was proposed to determine the binding-dioxygen in dioxygen complexes. By measuring the content change of nitrogen gas in a vial, the amount of oxygen released from dixoygen complexes can be determined. The method was validated using potassium chlorate as model sample, and the results exhibited good recoveries (90-99%) with the relative standard deviation less than 8%. It was also used to analyze dioxygen complex of cobalt bis(salicylaldehyde) ethylenediimine and polyamine cobalt complexes prepared by solid-phase reaction.

Ynamides in Ring Forming Transformations

PubMed Central

WANG, XIAO-NA; YEOM, HYUN-SUK; FANG, LI-CHAO; HE, SHUZHONG; MA, ZHI-XIONG; KEDROWSKI, BRANT L.; HSUNG, RICHARD P.

2013-01-01

Conspectus The ynamide functional group activates carbon-carbon triple bonds through an attached nitrogen atom that bears an electron-withdrawing group. As a result, the alkyne has both electrophilic and nucleophilic properties. Through the selection of the electron-withdrawing group attached to nitrogen chemists can modulate the electronic properties and reactivity of ynamides, making these groups versatile synthetic building blocks. The reactions of ynamides also lead directly to nitrogen-containing products, which provides access to important structural motifs found in natural products and molecules of medicinal interest. Therefore, researchers have invested increasing time and research in the chemistry of ynamides in recent years. This Account surveys and assesses new organic transformations involving ynamides developed in our laboratory and in others around the world. We showcase the synthetic power of ynamides for rapid assembly of complex molecular structures. Among the recent reports of ynamide transformations, ring-forming reactions provide a powerful tool for generating molecular complexity quickly. In addition to their synthetic utility, such reactions are mechanistically interesting. Therefore, we focus primarily on the cyclization chemistry of ynamides. This Account highlights ynamide reactions that are useful in the rapid synthesis of cyclic and polycyclic structural manifolds. We discuss the mechanisms active in the ring formations and describe representative examples that demonstrate the scope of these reactions and provide mechanistic insights. In this discussion we feature examples of ynamide reactions involving radical cyclizations, ring-closing metathesis, transition metal and non-transition metal mediated cyclizations, cycloaddition reactions, and rearrangements. The transformations presented rapidly introduce structural complexity and include nitrogen within, or in close proximity to, a newly formed ring (or rings). Thus, ynamides have emerged as powerful synthons for nitrogen-containing heterocycles and nitrogen-substituted rings, and we hope this Account will promote continued interest in the chemistry of ynamides. PMID:24164363

Carbon amendment stimulates benthic nitrogen cycling during the bioremediation of particulate aquaculture waste

NASA Astrophysics Data System (ADS)

Robinson, Georgina; MacTavish, Thomas; Savage, Candida; Caldwell, Gary S.; Jones, Clifford L. W.; Probyn, Trevor; Eyre, Bradley D.; Stead, Selina M.

2018-03-01

The treatment of organic wastes remains one of the key sustainability challenges facing the growing global aquaculture industry. Bioremediation systems based on coupled bioturbation-microbial processing offer a promising route for waste management. We present, for the first time, a combined biogeochemical-molecular analysis of the short-term performance of one such system that is designed to receive nitrogen-rich particulate aquaculture wastes. Using sea cucumbers (Holothuria scabra) as a model bioturbator we provide evidence that adjusting the waste C : N from 5 : 1 to 20 : 1 promoted a shift in nitrogen cycling pathways towards the dissimilatory nitrate reduction to ammonium (DNRA), resulting in net NH4+ efflux from the sediment. The carbon amended treatment exhibited an overall net N2 uptake, whereas the control receiving only aquaculture waste exhibited net N2 production, suggesting that carbon supplementation enhanced nitrogen fixation. The higher NH4+ efflux and N2 uptake was further supported by meta-genome predictions that indicate that organic-carbon addition stimulated DNRA over denitrification. These findings indicate that carbon addition may potentially result in greater retention of nitrogen within the system; however, longer-term trials are necessary to determine whether this nitrogen retention is translated into improved sea cucumber biomass yields. Whether this truly constitutes a remediation process is open for debate as there remains the risk that any increased nitrogen retention may be temporary, with any subsequent release potentially raising the eutrophication risk. Longer and larger-scale trials are required before this approach may be validated with the complexities of the in-system nitrogen cycle being fully understood.

Compound-specific amino acid isotopic analyses of invertebrates in the Chukchi Sea: New insights on food web dynamics

NASA Astrophysics Data System (ADS)

Zhang, M.; Cooper, L. W.; Biasatti, D. M.; Kedra, M.; Grebmeier, J. M.

2016-02-01

Food web dynamics in the Chukchi Sea have been previously evaluated using bulk analysis of stable carbon and nitrogen isotopes of organisms. However, recent advances in compound-specific stable isotope analysis of amino acids indicate the potential to better identify the contributions of different dietary sources (e.g., pelagic vs. benthic, ice algae vs. phytoplankton) and to resolve complexities of food web structure that are difficult to address with bulk isotope analysis. Here we combine amino acid δ13C and δ15N data measured from primary producers and tissues of bivalves, polychaetes and other benthic invertebrates collected during two cruises in the summer of 2013 and 2015 in the Pacific Arctic. The results showed spatial variation of carbon isotope values in amino acids with difference up to 6 per mil for each individual species or taxa studied, indicating a shift in the food-web baseline geographically. Furthermore, the spatial variation in isotopic values was related to environmental factors, specifically sea ice extent, and total organic carbon, total organic nitrogen and the carbon/nitrogen ratio of the organic fractions of surface sediments. Results also indicated that trophic levels, as estimated by differences in the nitrogen isotope composition of glutamic acid and phenylalanine [Δ15Nglu-phe (δ15Nglu - δ15Nphe)], varied spatially by 0.5 to 1.5 trophic levels for certain species or taxa such as Macoma calcarea, Maldanidae and Ampelisca, indicating trophic level shifts that were associated with the food quality of organic matter in the organic fraction of the sediments. These results can be potentially used to predict future food web change in this high latitude marine system that is known for its ecological importance and on-going environmental changes, including warming and sea ice decline.

A Minimal Nitrogen Fixation Gene Cluster from Paenibacillus sp. WLY78 Enables Expression of Active Nitrogenase in Escherichia coli

PubMed Central

Zhao, Dehua; Liu, Xiaomeng; Zhang, Bo; Xie, Jianbo; Hong, Yuanyuan; Li, Pengfei; Chen, Sanfeng; Dixon, Ray; Li, Jilun

2013-01-01

Most biological nitrogen fixation is catalyzed by molybdenum-dependent nitrogenase, an enzyme complex comprising two component proteins that contains three different metalloclusters. Diazotrophs contain a common core of nitrogen fixation nif genes that encode the structural subunits of the enzyme and components required to synthesize the metalloclusters. However, the complement of nif genes required to enable diazotrophic growth varies significantly amongst nitrogen fixing bacteria and archaea. In this study, we identified a minimal nif gene cluster consisting of nine nif genes in the genome of Paenibacillus sp. WLY78, a gram-positive, facultative anaerobe isolated from the rhizosphere of bamboo. We demonstrate that the nif genes in this organism are organized as an operon comprising nifB, nifH, nifD, nifK, nifE, nifN, nifX, hesA and nifV and that the nif cluster is under the control of a σ70 (σA)-dependent promoter located upstream of nifB. To investigate genetic requirements for diazotrophy, we transferred the Paenibacillus nif cluster to Escherichia coli. The minimal nif gene cluster enables synthesis of catalytically active nitrogenase in this host, when expressed either from the native nifB promoter or from the T7 promoter. Deletion analysis indicates that in addition to the core nif genes, hesA plays an important role in nitrogen fixation and is responsive to the availability of molybdenum. Whereas nif transcription in Paenibacillus is regulated in response to nitrogen availability and by the external oxygen concentration, transcription from the nifB promoter is constitutive in E. coli, indicating that negative regulation of nif transcription is bypassed in the heterologous host. This study demonstrates the potential for engineering nitrogen fixation in a non-nitrogen fixing organism with a minimum set of nine nif genes. PMID:24146630

The Pitcher Plant Sarracenia purpurea Can Directly Acquire Organic Nitrogen and Short-Circuit the Inorganic Nitrogen Cycle

PubMed Central

Karagatzides, Jim D.; Butler, Jessica L.; Ellison, Aaron M.

2009-01-01

Background Despite the large stocks of organic nitrogen in soil, nitrogen availability limits plant growth in many terrestrial ecosystems because most plants take up only inorganic nitrogen, not organic nitrogen. Although some vascular plants can assimilate organic nitrogen directly, only recently has organic nitrogen been found to contribute significantly to the nutrient budget of any plant. Carnivorous plants grow in extremely nutrient-poor environments and carnivory has evolved in these plants as an alternative pathway for obtaining nutrients. We tested if the carnivorous pitcher plant Sarracenia purpurea could directly take up intact amino acids in the field and compared uptake of organic and inorganic forms of nitrogen across a gradient of nitrogen deposition. We hypothesized that the contribution of organic nitrogen to the nitrogen budget of the pitcher plant would decline with increasing nitrogen deposition. Methodology and Principal Findings At sites in Canada (low nitrogen deposition) and the United States (high nitrogen deposition), individual pitchers were fed two amino acids, glycine and phenylalanine, and inorganic nitrogen (as ammonium nitrate), individually and in mixture. Plants took up intact amino acids. Acquisition of each form of nitrogen provided in isolation exceeded uptake of the same form in mixture. At the high deposition site, uptake of organic nitrogen was higher than uptake of inorganic nitrogen. At the low deposition site, uptake of all three forms of nitrogen was similar. Completeness of the associated detritus-based food web that inhabits pitcher-plant leaves and breaks down captured prey had no effect on nitrogen uptake. Conclusions and Significance By taking up intact amino acids, Sarracenia purpurea can short-circuit the inorganic nitrogen cycle, thus minimizing potential bottlenecks in nitrogen availability that result from the plant's reliance for nitrogen mineralization on a seasonally reconstructed food web operating on infrequent and irregular prey capture. PMID:19582167

Characterization and prediction of organic nitrogen biodegradability during anaerobic digestion: A bioaccessibility approach.

PubMed

Bareha, Y; Girault, R; Jimenez, J; Trémier, A

2018-04-26

Prediction of organic nitrogen mineralization into ammonium during anaerobic digestion is required for optimizing substitution of mineral fertilizer by digestates. The aim of this study was to understand organic nitrogen biodegradability and to investigate how it can be predicted from carbon biodegradability, and nitrogen bioaccessibility, respectively. Bioaccessibility was assessed using fractionation methods based on sequential extractions. Results showed that organic nitrogen was present in fractions whose bioaccessibility levels differed. Organic nitrogen and carbon biodegradability were also determined and compared. Results highlighted two groups of substrates: the first with an initial NH 4 + /TKN < 30%, whose carbon and nitrogen biodegradability are similar; the second with an initial NH 4 + /TKN > 30%, whose carbon and nitrogen biodegradability differ significantly. To enable prediction on all substrates, partial least square (PLS) regressions were carried out to link organic nitrogen bioaccessibility indicators to biodegradability. The models successfully predicted organic nitrogen biodegradability with a maximum prediction error of 10%. Copyright © 2018 Elsevier Ltd. All rights reserved.

Predicting organic matter, nitrogen, and phosphorus concentrations in runoff from peat extraction sites using partial least squares regression

NASA Astrophysics Data System (ADS)

Tuukkanen, T.; Marttila, H.; Kløve, B.

2017-07-01

Organic matter and nutrient export from drained peatlands is affected by complex hydrological and biogeochemical interactions. Here partial least squares regression (PLSR) was used to relate various soil and catchment characteristics to variations in chemical oxygen demand (COD), total nitrogen (TN), and total phosphorus (TP) concentrations in runoff. Peat core samples and water quality data were collected from 15 peat extraction sites in Finland. PLSR models constructed by cross-validation and variable selection routines predicted 92, 88, and 95% of the variation in mean COD, TN, and TP concentration in runoff, respectively. The results showed that variations in COD were mainly related to net production (temperature and water-extractable dissolved organic carbon (DOC)), hydrology (topographical relief), and solubility of dissolved organic matter (peat sulfur (S) and calcium (Ca) concentrations). Negative correlations for peat S and runoff COD indicated that acidity from oxidation of organic S stored in peat may be an important mechanism suppressing organic matter leaching. Moreover, runoff COD was associated with peat aluminum (Al), P, and sodium (Na) concentrations. Hydrological controls on TN and COD were similar (i.e., related to topography), whereas degree of humification, bulk density, and water-extractable COD and Al provided additional explanations for TN concentration. Variations in runoff TP concentration were attributed to erosion of particulate P, as indicated by a positive correlation with suspended sediment concentration (SSC), and factors associated with metal-humic complexation and P adsorption (peat Al, water-extractable P, and water-extractable iron (Fe)).

Speciation and Trends of Organic Nitrogen in Southeastern U.S. Fine Particulate Matter (PM2.5)

EPA Science Inventory

Dissolved free amino acids (FAA; amino acids present in a dissolvable state) and combined AA (CAA; amino acids present in peptides, proteins, or humic complexes) in fine aerosols (PM) are investigated at a semi-urban site in the southeastern US. Detection of native (chemically un...

Energy Transformations of Soil Organic Matter in a Changing World

NASA Astrophysics Data System (ADS)

Herrmann, A. M.; Coucheney, E.; Grice, S. M.; Ritz, K.; Harris, J.

2011-12-01

The role of soils in governing the terrestrial carbon balance is acknowledged as being important but remains poorly understood within the context of climate change. Soils exchange energy with their surroundings and are therefore open systems thermodynamically, but little is known how energy transformations of decomposition processes are affected by temperature. Soil organic matter and the soil biomass can be conceptualised as analogous to the 'fuel' and 'biological engine' of the earth, respectively, and are pivotal in driving the belowground carbon cycle. Thermodynamic principles of soil organic matter decomposition were evaluated by means of isothermal microcalorimetry (TAM Air, TA Instruments, Sollentuna Sweden: (i) Mineral forest soils from the Flakaliden long-term nitrogen fertilisation experiment (Sweden) were amended with a range of different substrates representing structurally simple to complex, ecologically pertinent organic matter and heat signatures were determined at temperatures between 5 and 25°C. (ii) Thermodynamic and resource-use efficiencies of the biomass were determined in arable soils which received contrasting long-term management regimes with respect to organic matter and nitrogen since 1956. The work showed that (i) structurally labile components have higher activation energy and temperature dependence than structurally more complex organic components. This is, however, in contrast to the thermodynamic argument which suggests the opposite that reactions metabolising structurally complex, aromatic components have higher temperature dependence than reactions metabolising structurally more labile components. (ii) Microbial communities exposed to long-term stress by heavy metal and low pH were less thermodynamic efficient and showed a decrease in resource-use efficiency in comparison with conventional input regimes. Differences in efficiencies were mirrored in both the phenotypic and functional profiles of the communities. We will present our findings illustrating the capacity of isothermal microcalorimetry to evaluate temperature dependencies of soil organic matter decomposition, associated energy transformations and thermodynamic principles in soil ecosystems.

Electrochemical wastewater treatment: influence of the type of carbon and of nitrogen on the organic load removal.

PubMed

Fernandes, Annabel; Coelho, João; Ciríaco, Lurdes; Pacheco, Maria José; Lopes, Ana

2016-12-01

Boron-doped diamond (BDD) and Ti/Pt/PbO 2 anodes were utilized to perform the electrodegradation of synthetic samples containing humic acid in the presence of different organic and inorganic carbon-containing and nitrogen-containing compounds. The influence of the chloride ion in the degradation process of the different synthetic samples was also assessed. The results showed that the anodic oxidation process can efficiently degrade recalcitrant compounds such as humic acid. The presence of carbonate in solution enhances the nitrogen removal, whereas it hinders the oxidation of the organic compounds. When organic nitrogen is present, it is converted to NH 4 + , which in turn is oxidized to nitrate and to volatile nitrogen compounds. Hydroxyl radicals are more prone to oxidize the organic nitrogen than the ammonium nitrogen. The presence of chloride enhances the organic matter and nitrogen removal rates, BDD being the anode material that yields the highest removals.

[Relationship between groundwater quality index of nutrition element and organic matter in riparian zone and water quality in river].

PubMed

Hua-Shan, Xu; Tong-Qian, Zhao; Hong-Q, Meng; Zong-Xue, Xu; Chao-Hon, Ma

2011-04-01

Riparian zone hydrology is dominated by shallow groundwater with complex interactions between groundwater and surface water. There are obvious relations of discharge and recharge between groundwater and surface water. Flood is an important hydrological incident that affects groundwater quality in riparian zone. By observing variations of physical and chemical groundwater indicators in riparian zone at the Kouma section of the Yellow River Wetland, especially those took place in the period of regulation for water and sediment at the Xiaolangdi Reservoir, relationship between the groundwater quality in riparian zone and the flood water quality in the river is studied. Results show that there will be great risk of nitrogen, phosphorus, nitrate nitrogen and organic matter permeating into the groundwater if floodplain changes into farmland. As the special control unit of nitrogen pollution between rivers and artificial wetlands, dry fanning areas near the river play a very important role in nitrogen migration between river and groundwater. Farm manure as base fertilizer may he an important source of phosphorus leak and loss at the artificial wetlands. Phosphorus leaks into the groundwater and is transferred along the hydraulic gradient, especially during the period of regulation for water and sediment at the Xiaolangdi Reservoir. The land use types and farming systems of the riparian floodplain have a major impact on the nitrate nitrogen contents of the groundwater. Nitrogen can infiltrate and accumulate quickly at anaerobic conditions in the fish pond area, and the annual nitrogen achieves a relatively balanced state in lotus area. In those areas, the soil is flooded and at anaerobic condition in spring and summer, nitrogen infiltrates and denitrification significantly, but soil is not flooded and at aerobic condition in the autumn and winter, and during these time, a significant nitrogen nitrification process occurs. In the area between 50 m and 200 m from the river bank, which is the efficient microbial nitrogen purification unit, nitrification-denitrification is intensive. Farm manure is an important source of organic matter loss at the artificial wetlands. Floodplain has sandy soil texture, with high infiltration capacity and low water and fertilizer conservation ability. Such features are prone for the loss of surface soil nutrition and organic matter if agricultural activities taken place in these areas change the land use of wetlands and apply extensive fertilizer. The infiltrated nutrition elements and organic matter can pollute the groundwater and the river. Compared with the losses of nutrition element and organic matter caused by surface runoff, the infiltrated process is even more prominent. As typical floodplain groundwater-river ecotone, the area between 50 m and 200 m from the river bank is a momentous pollution purification unit. Rational protection for this region is critical for the conservation of water quality in the river and groundwater.

The Combined Role Of Manganese Oxides And Microbes In The yAbiotic Uptake Of Amino Acid Nitrogen Into Litter And Soil Organic yMatter

NASA Astrophysics Data System (ADS)

Filley, T. R.; Dria, K.

2004-12-01

Soil organic matter (SOM) is the largest terrestrial C and N store. Microbial yand abiotic processes that control the transformation of protein nitrogen in litter and ysoils into macromolecular humic materials play an important role in organic matter ystorage and soil productivity. There are major gaps, however, in our understanding of ythese processes and behaviors. Abiotic reactions of amines, phenols and sugars derived yfrom forest leachates or present in detrital and litter organic matter are known to be ykey processes in the formation of complex organic nitrogen. We present here the yresults from a study designed to investigate how the inherent chemistry of lignin, leaf ylitter, and progressively advanced brown-rot wood decay impact the chemical reaction yof amino acids with this organic matter. Additionally, experiments in the presence of ybirnessite (MnO2) were also conducted to investigate the role of mineral induced phenol yoxidation on specific amino acid chemical humifcation processes. Solid and liquid state yNMR, 13C-labelled tetramethyl ammonium hydroxide thermochemolysis and stable ycarbon and nitrogen isotope ratio mass spectrometry were used to track the alteration yof litter material and document uptake of 13C and 15N labeled amino acids. yPreliminary results from birnessite-containing experiments suggest that the metal-ypromoted oxidation of the lignin, leaf litter, and, in particular, demethylated brown rot ywood residues, is necessary to convert the phenols to quinones of some type permitting yamine addition. This relationship is particularly true for the production of soluble yfractions after two and six weeks of reaction in the presence of the manganese oxides. yAdditionally, the production of leachable organic matter with incorporated N was ypromoted in the soluble fractions. Ongoing NMR studies will elucidate the nature of ythe chemical binding in these experiments. y

Protons and pleomorphs: aerobic hydrogen production in Azotobacters.

PubMed

Noar, Jesse D; Bruno-Bárcena, José M

2016-02-01

As obligate aerobic soil organisms, the ability of Azotobacter species to fix nitrogen is unusual given that the nitrogenase complex requires a reduced cellular environment. Molecular hydrogen is an unavoidable byproduct of the reduction of dinitrogen; at least one molecule of H2 is produced for each molecule of N2 fixed. This could be considered a fault in nitrogenase efficiency, essentially a waste of energy and reducing equivalents. Wild-type Azotobacter captures this hydrogen and oxidizes it with its membrane-bound uptake hydrogenase complex. Strains lacking an active hydrogenase complex have been investigated for their hydrogen production capacities. What is the role of H2 in the energy metabolism of nitrogen-fixing Azotobacter? Is hydrogen production involved in Azotobacter species' protection from or tolerance to oxygen, or vice versa? What yields of hydrogen can be expected from hydrogen-evolving strains? Can the yield of hydrogen be controlled or increased by changing genetic, environmental, or physiological conditions? We will address these questions in the following mini-review.

Removal of basic nitrogen compounds from hydrocarbon liquids

DOEpatents

Givens, Edwin N.; Hoover, David S.

1985-01-01

A method is provided for reducing the concentration of basic nitrogen compounds in hydrocarbonaceous feedstock fluids used in the refining industry by providing a solid particulate carbonaceous adsorbent/fuel material such as coal having active basic nitrogen complexing sites on the surface thereof and the coal with a hydrocarbonaceous feedstock containing basic nitrogen compounds to facilitate attraction of the basic nitrogen compounds to the complexing sites and the formation of complexes thereof on the surface of the coal. The adsorbent coal material and the complexes formed thereon are from the feedstock fluid to provide a hydrocarbonaceous fluid of reduced basic nitrogen compound concentration. The coal can then be used as fuel for boilers and the like.

Nitrogen amendment of green waste impacts microbial community, enzyme secretion and potential for lignocellulose decomposition

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yu, Chaowei; Harrold, Duff R.; Claypool, Joshua T.

Microorganisms involved in biomass deconstruction are an important resource for organic waste recycling and enzymes for lignocellulose bioconversion. The goals of this paper were to examine the impact of nitrogen amendment on microbial community restructuring, secretion of xylanases and endoglucanases, and potential for biomass deconstruction. Communities were cultivated aerobically at 55 °C on green waste (GW) amended with varying levels of NH 4Cl. Bacterial and fungal communities were determined using 16S rRNA and ITS region gene sequencing and PICRUSt (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States) was applied to predict relative abundance of genes involved in lignocellulose hydrolysis.more » Nitrogen amendment significantly increased secretion of xylanases and endoglucanases, and microbial activity; enzyme activities and cumulative respiration were greatest when nitrogen level in GW was between 4.13–4.56 wt% (g/g), but decreased with higher nitrogen levels. The microbial community shifted to one with increasing potential to decompose complex polymers as nitrogen increased with peak potential occurring between 3.79–4.45 wt% (g/g) nitrogen amendment. Finally, the results will aid in informing the management of nitrogen level to foster microbial communities capable of secreting enzymes that hydrolyze recalcitrant polymers in lignocellulose and yield rapid decomposition of green waste.« less

The Nitrogen Cycle Before the Rise of Oxygen

NASA Astrophysics Data System (ADS)

Ward, L. M.; Hemp, J.; Fischer, W. W.

2016-12-01

The nitrogen cycle on Earth today is driven by a complex network of microbially-mediated transformations. Atmospheric N2 is fixed into biologically available forms that can either be incorporated into biomass or utilized for bioenergetic redox reactions. The cycle is kept in balance by the return of fixed nitrogen to the atmospheric N2 pool by anammox and denitrification. The early evolution and history of the nitrogen cycle is not well resolved, particularly before the evolution of oxygenic photosynthesis and rise of atmospheric oxygen ca. 2.3 Gya. Ammonia oxidation is a biochemically difficult reaction requiring activation of ammonia using O2 or oxidized nitrogen species that are produced using O2. Before the rise of oxygen, when O2 was largely unavailable, nitrification could not proceed, trapping fixed nitrogen in reduced forms such as ammonia and biomass. Without production of nitrite and nitrate, anammox and denitrification could not occur, preventing return of fixed nitrogen to the N2 pool and leaving the nitrogen cycle unclosed. While it has been hypothesized that ammonia oxidation could be driven anaerobically by processes such as phototrophy or iron reduction, these metabolisms have not been recovered in extant microorganisms, and would require complex unknown biochemical mechanisms. Furthermore, phylogenetic data for the key organisms and biochemical pathways involved in denitrification and anammox suggest that these metabolisms postdate the rise of oxygen. This is particularly clear for steps utilizing enzymes in the Heme-Copper Oxidoreductase superfamily, which appear to have originally evolved for O2 reduction at non-negligible substrate concentrations. Together, this suggests that the Archean nitrogen cycle was not closed, and that nitrogen fixed to reduced forms—either through biological nitrogen fixation or abiotic processes—was not easily returned to the atmospheric N2 pool. In principle, this could have stripped the atmosphere of N2 over timescales of hundreds of Myr, which is consistent with recent paleopressure estimates that suggest < 0.5 bar by late Archean time. The modern, N2-rich atmosphere and (largely) closed biological nitrogen cycle may therefore not have evolved until Proterozoic time, after the rise of oxygen.

Characterization of complex organics produced by proton irradiation of simulated Titan atmosphere

NASA Astrophysics Data System (ADS)

Taniuchi, T.; Hosogai, T.; Kaneko, T.; Kobayashi, K.

Titan the biggest satellite of Saturn has dense atmosphere that mainly consists of nitrogen and methane Voyager observation showed the presence of organic haze in Titan atmosphere Some scientists suggested the existence liquid hydrocarbon and water ice on surface Recently Huygens probe sent the analytical data about organic aerosol in Titan atmosphere to the Earth while in the Cassini-Huygens Mission It is supposed that Titan has somewhat similar environments to the primitive Earth so many observations and simulation experiments have been done where mainly UV light or electric discharges are used as energy sources Khare and Sagan reported that the organic materials produced by electric discharges in simulated Titan atmosphere tholin had structure with hydrocarbons nitriles hetero aromatic compounds and so on and that tholin yielded amino acids after hydrolysis They simulated the condition of upper atmosphere of Titan Though cosmic rays are possible effective energy source near the surface on Titan for the formation of organic compounds there were few laboratory simulations of cosmic ray tholin In this study we irradiated proton beam to the mixture of nitrogen and methane to verify the possibile formation of cosmic ray tholin in lower Titan atmosphere A mixture of methane 1-5 and nitrogen balance was irradiated with 3 MeV proton from a van de Graaff accelerator The resulting tholin was analyzed by Pyrolysis Py -GC MS and 1 H NMR to estimate the structure Gel permeation chromatography GPC and

[Effects of long-term fertilization on organic nitrogen fractions in aquic brown soil].

PubMed

Ren, Jin Feng; Zhou, Hua; Ma, Qiang; Xu, Yong Gang; Jiang, Chun Ming; Pan, Fei Fei; Yu, Wan Tai

2017-05-18

The purpose of present research was to investigate how different fertilization regimes altered soil organic nitrogen fractions and their inter-annual dynamics based on a series of long-term experiment (initiated at 1990), including: CK (non-fertilization); M (recycled pig manure); NPK (chemical fertilizer NPK); NPK + M (recycled pig manure with chemical fertilizer NPK). The results showed that soil organic nitrogen components under the different fertilization treatments presented contrastive patterns from the establishment the experiments to 2015. Generally, acid hydrolysable organic nitrogen content increased year by year. The amino acid nitrogen content under CK and NPK treatments consistently declined, although amino acid nitrogen for M and NPK+M treatments showed a increasing trend. These phenomena were probably ascribed to the utilization of soil amino acids by microbes. From 1990 to 2015, NPK treatment substantially elevated the content of acid-released ammonium nitrogen by 31.1% compared with CK (mean value across the experiment), and for the treatments using organic manure (M and NPK+M), the contents of all fractions of soil organic nitrogen increased. Notably, the increase magnitudes for NPK+M were more dramatic than those of M. These results demonstrated that combined use of organic and inorganic fertilizers could more effectively elevate soil organic nitrogen, subsequently helping to improve the capacity of soil nitrogen supply and enhance the soil fertility.

Rapid estimation of organic nitrogen in oil shale waste waters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, B.M.; Daughton, C.G.; Harris, G.J.

1984-04-01

Many of the characteristics of oil shale process waste waters (e.g., malodors, color, and resistance to biotreatment) are imparted by numerous nitrogenous heterocycles and aromatic amines. For the frequent performance assessment of waste treatment processes designed to remove these nitrogenous organic compounds, a rapid and colligative measurement of organic nitrogen is essential. Quantification of organic nitrogen in biological and agricultural samples is usually accomplished using the time-consuming, wet-chemical Kjeldahl method. For oil shale waste waters, whose primary inorganic nitorgen constituent is amonia, organic Kjeldahl nitrogen (OKN) is determined by first eliminating the endogenous ammonia by distillation and then digesting themore » sample in boiling H/sub 2/SO/sub 4/. The organic material is oxidized, and most forms of organically bound nitrogen are released as ammonium ion. After the addition of base, the ammonia is separated from the digestate by distillation and quantified by acidimetric titrimetry or colorimetry. The major failings of this method are the loss of volatile species such as aliphatic amines (during predistillation) and the inability to completely recover nitrogen from many nitrogenous heterocycles (during digestion). Within the last decade, a new approach has been developed for the quantification of total nitrogen (TN). The sample is first combusted, a« less

Meteors do not break exogenous organic molecules into high yields of diatomics

NASA Technical Reports Server (NTRS)

Jenniskens, Peter; Schaller, Emily L.; Laux, Christophe O.; Wilson, Michael A.; Schmidt, Greg; Rairden, Rick L.

2004-01-01

Meteoroids that dominate the Earth's extraterrestrial mass influx (50-300 microm size range) may have contributed a unique blend of exogenous organic molecules at the time of the origin of life. Such meteoroids are so large that most of their mass is ablated in the Earth's atmosphere. In the process, organic molecules are decomposed and chemically altered to molecules differently from those delivered to the Earth's surface by smaller (<50 microm) micrometeorites and larger (>10 cm) meteorites. The question addressed here is whether the organic matter in these meteoroids is fully decomposed into atoms or diatomic compounds during ablation. If not, then the ablation products made available for prebiotic organic chemistry, and perhaps early biology, might have retained some memory of their astrophysical nature. To test this hypothesis we searched for CN emission in meteor spectra in an airborne experiment during the 2001 Leonid meteor storm. We found that the meteor's light-emitting air plasma, which included products of meteor ablation, contained less than 1 CN molecule for every 30 meteoric iron atoms. This contrasts sharply with the nitrogen/iron ratio of 1:1.2 in the solid matter of comet 1P/Halley. Unless the nitrogen content or the abundance of complex organic matter in the Leonid parent body, comet 55P/Tempel-Tuttle, differs from that in comet 1P/Halley, it appears that very little of that organic nitrogen decomposes into CN molecules during meteor ablation in the rarefied flow conditions that characterize the atmospheric entry of meteoroids approximately 50 microm-10 cm in size. We propose that the organics of such meteoroids survive instead as larger compounds.

Proton transfer and hydrogen bonding in the organic solid state: a combined XRD/XPS/ssNMR study of 17 organic acid-base complexes.

PubMed

Stevens, Joanna S; Byard, Stephen J; Seaton, Colin C; Sadiq, Ghazala; Davey, Roger J; Schroeder, Sven L M

2014-01-21

The properties of nitrogen centres acting either as hydrogen-bond or Brønsted acceptors in solid molecular acid-base complexes have been probed by N 1s X-ray photoelectron spectroscopy (XPS) as well as (15)N solid-state nuclear magnetic resonance (ssNMR) spectroscopy and are interpreted with reference to local crystallographic structure information provided by X-ray diffraction (XRD). We have previously shown that the strong chemical shift of the N 1s binding energy associated with the protonation of nitrogen centres unequivocally distinguishes protonated (salt) from hydrogen-bonded (co-crystal) nitrogen species. This result is further supported by significant ssNMR shifts to low frequency, which occur with proton transfer from the acid to the base component. Generally, only minor chemical shifts occur upon co-crystal formation, unless a strong hydrogen bond is formed. CASTEP density functional theory (DFT) calculations of (15)N ssNMR isotropic chemical shifts correlate well with the experimental data, confirming that computational predictions of H-bond strengths and associated ssNMR chemical shifts allow the identification of salt and co-crystal structures (NMR crystallography). The excellent agreement between the conclusions drawn by XPS and the combined CASTEP/ssNMR investigations opens up a reliable avenue for local structure characterization in molecular systems even in the absence of crystal structure information, for example for non-crystalline or amorphous matter. The range of 17 different systems investigated in this study demonstrates the generic nature of this approach, which will be applicable to many other molecular materials in organic, physical, and materials chemistry.

Experimental identification of nitrogen-vacancy complexes in nitrogen implanted silicon

NASA Astrophysics Data System (ADS)

Adam, Lahir Shaik; Law, Mark E.; Szpala, Stanislaw; Simpson, P. J.; Lawther, Derek; Dokumaci, Omer; Hegde, Suri

2001-07-01

Nitrogen implantation is commonly used in multigate oxide thickness processing for mixed signal complementary metal-oxide-semiconductor and System on a Chip technologies. Current experiments and diffusion models indicate that upon annealing, implanted nitrogen diffuses towards the surface. The mechanism proposed for nitrogen diffusion is the formation of nitrogen-vacancy complexes in silicon, as indicated by ab initio studies by J. S. Nelson, P. A. Schultz, and A. F. Wright [Appl. Phys. Lett. 73, 247 (1998)]. However, to date, there does not exist any experimental evidence of nitrogen-vacancy formation in silicon. This letter provides experimental evidence through positron annihilation spectroscopy that nitrogen-vacancy complexes indeed form in nitrogen implanted silicon, and compares the experimental results to the ab initio studies, providing qualitative support for the same.

Diurnal variability in carbon and nitrogen pools within Chesapeake Bay and northern Gulf of Mexico: implications for future ocean color satellite sensors

NASA Astrophysics Data System (ADS)

Mannino, A.; Novak, M. G.; Tzortziou, M.; Salisbury, J.

2016-02-01

Relative to their areal extent, estuaries and coastal ocean ecosystems contribute disproportionately more to global biogeochemical cycling of carbon, nitrogen and other elements compared to the open ocean. Applying ocean color satellite data to study biological and biogeochemical processes within coastal ecosystems is challenging due to the complex mixtures of aquatic constituents derived from terrestrial, anthropogenic, and marine sources, human-impacted atmospheric properties, presence of clouds during satellite overpass, fine-scale spatial gradients, and time-varying processes on diurnal scales that cannot be resolved with current sensors. On diurnal scales, biological, photochemical, and biogeochemical processes are regulated by the variation in solar radiation. Other physical factors, such as tides, river discharge, estuarine and coastal ocean circulation, wind-driven mixing, etc., impart further variability on biological and biogeochemical processes on diurnal to multi-day time scales. Efforts to determine the temporal frequency required from a NASA GEO-CAPE ocean color satellite sensor to discern diurnal variability C and N stocks, fluxes and productivity culminated in field campaigns in the Chesapeake Bay and northern Gulf of Mexico. Near-surface drogues were released and tracked in quasi-lagrangian space to monitor hourly changes in community production, C and N stocks, and optical properties. While only small diurnal changes were observed in dissolved organic carbon (DOC) and colored dissolved organic matter (CDOM) absorption in Chesapeake Bay, substantial variation in particulate organic carbon (POC) and nitrogen (PN), chlorophyll-a, and inorganic nitrogen (DIN) were measured. Similar or greater diurnal changes in POC, PN, chlorophyll-a and DIN were found in Gulf of Mexico nearshore and offshore sites. These results suggest that satellite observations at hourly frequency are desirable to capture diurnal variability in carbon and nitrogen stocks, fluxes and productivity within coastal ecosystems.

Complex Catchment Processes that Control Stream Nitrogen and Organic Matter Concentrations in a Northeastern USA Upland Catchment

NASA Astrophysics Data System (ADS)

Sebestyen, S. D.; Shanley, J. B.; Pellerin, B.; Saraceno, J.; Aiken, G. R.; Boyer, E. W.; Doctor, D. H.; Kendall, C.

2009-05-01

There is a need to understand the coupled biogeochemical and hydrological processes that control stream hydrochemistry in upland forested catchments. At watershed 9 (W-9) of the Sleepers River Research Watershed in the northeastern USA, we use high-frequency sampling, environmental tracers, end-member mixing analysis, and stream reach mass balances to understand dynamic factors affect forms and concentrations of nitrogen and organic matter in streamflow. We found that rates of stream nitrate processing changed during autumn baseflow and that up to 70% of nitrate inputs to a stream reach were retained. At the same time, the stream reach was a net source of the dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) fractions of dissolved organic matter (DOM). The in-stream nitrate loss and DOM gains are examples of hot moments of biogeochemical transformations during autumn when deciduous litter fall increases DOM availability. As hydrological flowpaths changed during rainfall events, the sources and transformations of nitrate and DOM differed from baseflow. For example, during storm flow we measured direct inputs of unprocessed atmospheric nitrate to streams that were as large as 30% of the stream nitrate loading. At the same time, stream DOM composition shifted to reflect inputs of reactive organic matter from surficial upland soils. The transport of atmospheric nitrate and reactive DOM to streams underscores the importance of quantifying source variation during short-duration stormflow events. Building upon these findings we present a conceptual model of interacting ecosystem processes that control the flow of water and nutrients to streams in a temperate upland catchment.

Nitrogen mineralization and geochemical characteristics of amino acids in surface sediments of a typical polluted area in the Haihe River Basin, China.

PubMed

Zhao, Yu; Shan, Baoqing; Tang, Wenzhong; Zhang, Hong

2015-11-01

Studies of nitrogen mineralization and diagenetic status of organic matter evaluated by total hydrolysable amino acids (THAAs) were designed to test the hypothesis that nitrogen mineralization in sediments was a potential source of ammonium in strongly artificially disturbed rivers such as the Ziya River watershed. Ammonium and organic nitrogen in both water and sediment samples were the major forms of nitrogen in the watershed. NH3-N was significantly correlated with organic nitrogen in both water (R = 0.823, P < 0.01) and sediments (R = 0.787, P < 0.01). Organic nitrogen with an average content of 3,275.21 ± 1,476.10 mg · kg(-1), accounted for 82.73 % of total nitrogen (TN) in sediments. Organic nitrogen was a potential source of ammonia release into overlying water. Nitrogen mineralization experiments showed that accumulated dissolved inorganic nitrogen ranged from 326.15 to 545.72 mg · kg(-1) and accumulated NH3-N ranged from 320.95 to 533.93 mg · kg(-1). Most of the mineralized nitrogen was NH3-N ( approximately 98.17%) and mineralized nitrogen in sediments ranged from 6.20 to 22.10% of TN. Twenty amino acids were detected, accounting for 45.70 % of organic nitrogen. Protein amino acids, accounting for 89.22% of THAAs, were the dominant THAAs in sediments. The ratio of L-glutamic acid to γ-aminobutyric acid and degradation index showed that the organic matter was poorly degraded and presented a high potential risk of ammonium mineralization.

Roostocks/Scion/Nitrogen Interactions Affect Secondary Metabolism in the Grape Berry

PubMed Central

Habran, Aude; Commisso, Mauro; Helwi, Pierre; Hilbert, Ghislaine; Negri, Stefano; Ollat, Nathalie; Gomès, Eric; van Leeuwen, Cornelis; Guzzo, Flavia; Delrot, Serge

2016-01-01

The present work investigates the interactions between soil content, rootstock, and scion by focusing on the effects of roostocks and nitrogen supply on grape berry content. Scions of Cabernet Sauvignon (CS) and Pinot Noir (PN) varieties were grafted either on Riparia Gloire de Montpellier (RGM) or 110 Richter (110R) rootstock. The 4 rooststock/scion combinations were fertilized with 3 different levels of nitrogen after fruit set. Both in 2013 and 2014, N supply increased N uptake by the plants, and N content both in vegetative and reproductory organs. Rootstock, variety and year affected berry weight at harvest, while nitrogen did not affect significantly this parameter. Grafting on RGM consistently increased berry weight compared to 110R. PN consistently produced bigger berries than CS. CS berries were heavier in 2014 than in 2013, but the year effect was less marked for PN berries. The berries were collected between veraison and maturity, separated in skin and pulp, and their content was analyzed by conventional analytical procedures and untargeted metabolomics. For anthocyanins, the relative quantitation was fairly comparable with both LC-MS determination and HPLC-DAD, which is a fully quantitative technique. The data show complex responses of the metabolite content (sugars, organic acids, amino acids, anthocyanins, flavonols, flavan-3-ols/procyanidins, stilbenes, hydroxycinnamic, and hydroxybenzoic acids) that depend on the rootstock, the scion, the vintage, the nitrogen level, the berry compartment. This opens a wide range of possibilities to adjust the content of these compounds through the choice of the roostock, variety and nitrogen fertilization. PMID:27555847

Roostocks/Scion/Nitrogen Interactions Affect Secondary Metabolism in the Grape Berry.

PubMed

Habran, Aude; Commisso, Mauro; Helwi, Pierre; Hilbert, Ghislaine; Negri, Stefano; Ollat, Nathalie; Gomès, Eric; van Leeuwen, Cornelis; Guzzo, Flavia; Delrot, Serge

2016-01-01

The present work investigates the interactions between soil content, rootstock, and scion by focusing on the effects of roostocks and nitrogen supply on grape berry content. Scions of Cabernet Sauvignon (CS) and Pinot Noir (PN) varieties were grafted either on Riparia Gloire de Montpellier (RGM) or 110 Richter (110R) rootstock. The 4 rooststock/scion combinations were fertilized with 3 different levels of nitrogen after fruit set. Both in 2013 and 2014, N supply increased N uptake by the plants, and N content both in vegetative and reproductory organs. Rootstock, variety and year affected berry weight at harvest, while nitrogen did not affect significantly this parameter. Grafting on RGM consistently increased berry weight compared to 110R. PN consistently produced bigger berries than CS. CS berries were heavier in 2014 than in 2013, but the year effect was less marked for PN berries. The berries were collected between veraison and maturity, separated in skin and pulp, and their content was analyzed by conventional analytical procedures and untargeted metabolomics. For anthocyanins, the relative quantitation was fairly comparable with both LC-MS determination and HPLC-DAD, which is a fully quantitative technique. The data show complex responses of the metabolite content (sugars, organic acids, amino acids, anthocyanins, flavonols, flavan-3-ols/procyanidins, stilbenes, hydroxycinnamic, and hydroxybenzoic acids) that depend on the rootstock, the scion, the vintage, the nitrogen level, the berry compartment. This opens a wide range of possibilities to adjust the content of these compounds through the choice of the roostock, variety and nitrogen fertilization.

Transport and Fate of Organic and Inorganic Nitrogen from Biosolids leachates

NASA Astrophysics Data System (ADS)

Ilani, Talli; Trifonov, Pavel; Arye, Gilboa

2014-05-01

The use of biosolids as a means to ameliorate soil becomes prevalent in the last few years. In agricultural fields, the application of biosolids will be followed by irrigation; resulting in excessive leaching of the dissolved fraction of the organic matter. The dissolved organic matter (DOM) is one of the major players in the chemical, physical and biological processes in soils. The DOM mainly composed of dissolved organic carbon (DOC) and lower proportions of dissolved organic nitrogen (DON) and phosphate (DOP). The DON is considered to be the primary source of mineralisable nitrogen in the soil and can be used as an estimate of the nitrogen supplying capacity of the organic matter. Most of the researches which are dealing with nitrogen fate in terrestrial environments focused on its inorganic fractions (mainly nitrate and ammonium) and their transport toward the dipper soil layers. Since DON can be the source of the inorganic nitrogen (by providing nutrients and energy to nitrifying microbes, which in turn increases the nitrogen source for plants as nitrate), knowledge about the nature of its transport characteristics in the soil is important in the case of biosolids amendment. In addition, irrigation water quality (e.g. fresh water, wastewater or desalinized water) may significantly affect the transport and fate of the various nitrogen forms. The main objective of this study is to examine the fate and co-transport of organic and inorganics nitrogen, originating from biosolids leachates in the subsoil. The effect of water quality and flow rate under saturated steady-state flow is examined by a series of flow-through soil column experiments. The established breakthrough curves of the co-transport of total nitrogen, organic nitrogen (will be calculated from the differences between the total nitrogen measurements and the inorganic nitrogen measurements), nitrate, ammonium, dissolved organic carbon and chloride is presented and discussed.

Biodegradation of CuTETA, an effluent by-product in mineral processing.

PubMed

Cushing, Alexander M L; Kelebek, Sadan; Yue, Siqing; Ramsay, Juliana A

2018-04-13

Polyamines such as triethylenetetramine (TETA) and other amine chelators are used in mineral processing applications. Formation of heavy metal complexes of these reagents as a by-product in effluent water is a recent environmental concern. In this study, Paecilomyces sp. was enriched from soil on TETA as the sole source of carbon and nitrogen and was found to degrade > 96 and 90% CuTETA complexes at initial concentrations of 0.32 and 0.79 mM respectively, following 96-h incubation. After destabilization, most of the copper (> 78%) was complexed extracellularly and the rest was associated with the cell. Mass spectroscopy results provided confirmation that copper re-complexed with small, extracellular, and organic molecules. There are no reports in the literature that Paecilomyces or any other organism can grow on TETA or CuTETA. This study is the first to show that biological destabilization of CuTETA complexes in mineral processing effluents is feasible.

Soil nitrogen patterns induced by colonization of Polygonum cuspidatum on Mt. Fuji.

PubMed

Hirose, T; Tateno, M

1984-02-01

The spatial pattern of soil nitrogen was analyzed for a patchy vegetation formed by the colonization of Polygonum cuspidatum in a volcanic "desert" on Mt. Fuji. Soils were sampled radially from the bare ground to the center of the patch, and analyses were done for bulk density, water content, soil acidity, organic matter, organic nitrogen, and ammonium and nitrate nitrogen. The soils matured with succession from the bare ground through P. cuspidatum to Miscanthus oligostachyus and Aster ageratoides sites: bulk density decreased, and water content, organic matter, organic nitrogen, and ammonium nitrogen increased. Nitrate nitrogen showed the highest values at the P. cuspidatum site. Application of principal component analysis to the soil data discriminated two component factors which control the variation of soil characteristics: the first factor is related to soil formation and the second factor to nitrogen mineralization and nitrification. The effect of soil formation on nitrogen mineralization and nitrification was analyzed with a first-order kinetic model. The decreasing trends with soil formation in the ratios of mineral to organic nitrogen and of nitrate to ammonium nitrogen could be accounted for by the higher activity of immobilization by microorganisms and uptake by plants in the more mature ecosystem.

Organic nitrogen chemistry during low-grade metamorphism

USGS Publications Warehouse

Boudou, J.-P.; Schimmelmann, A.; Ader, M.; Mastalerz, Maria; Sebilo, M.; Gengembre, L.

2008-01-01

Most of the organic nitrogen (Norg) on Earth is disseminated in crustal sediments and rocks in the form of fossil nitrogen-containing organic matter. The chemical speciation of fossil Norg within the overall molecular structure of organic matter changes with time and heating during burial. Progressive thermal evolution of organic matter involves phases of enhanced elimination of Norg and ultimately produces graphite containing only traces of nitrogen. Long-term chemical and thermal instability makes the chemical speciation of Norg a valuable tracer to constrain the history of sub-surface metamorphism and to shed light on the subsurface biogeochemical nitrogen cycle and its participating organic and inorganic nitrogen pools. This study documents the evolutionary path of Norg speciation, transformation and elimination before and during metamorphism and advocates the use of X-ray photoelectron spectroscopy (XPS) to monitor changes in Norg speciation as a diagnostic tool for organic metamorphism. Our multidisciplinary evidence from XPS, stable isotopes, traditional quantitative coal analyses, and other analytical approaches shows that at the metamorphic onset Norg is dominantly present as pyrrolic and pyridinic nitrogen. The relative abundance of nitrogen substituting for carbon in condensed, partially aromatic systems (where N is covalently bonded to three C atoms) increases exponentially with increasing metamorphic grade, at the expense of pyridinic and pyrrolic nitrogen. At the same time, much Norg is eliminated without significant nitrogen isotope fractionation. The apparent absence of Rayleigh-type nitrogen isotopic fractionation suggests that direct thermal loss of nitrogen from an organic matrix does not serve as a major pathway for Norg elimination. Instead, we propose that hot H, O-containing fluids or some of their components gradually penetrate into the carbonaceous matrix and eliminate Norg along a progressing reaction front, without causing nitrogen isotope fractionation in the residual Norg in the unreacted core of the carbonaceous matrix. Before the reaction front can reach the core, an increasing part of core Norg chemically stabilizes in the form of nitrogen atoms substituting for carbon in condensed, partially aromatic systems forming graphite-like structural domains with delocalized ??-electron systems (nitrogen atoms substituting for "graphitic" carbon in natural metamorphic organic matter). Thus, this nitrogen species with a conservative isotopic composition is the dominant form of residual nitrogen at higher metamorphic grade. ?? 2007 Elsevier Ltd. All rights reserved.

Water Soluble Organic Nitrogen (WSON) in Ambient Fine Particles Over a Megacity in South China: Spatiotemporal Variations and Source Apportionment

NASA Astrophysics Data System (ADS)

Yu, Xu; Yu, Qingqing; Zhu, Ming; Tang, Mingjin; Li, Sheng; Yang, Weiqiang; Zhang, Yanli; Deng, Wei; Li, Guanghui; Yu, Yuegang; Huang, Zhonghui; Song, Wei; Ding, Xiang; Hu, Qihou; Li, Jun; Bi, Xinhui; Wang, Xinming

2017-12-01

Organic nitrogen aerosols are complex mixtures and important compositions in ambient fine particulate matters (PM2.5), yet their sources and spatiotemporal patterns are not well understood particularly in regions influenced by intensive human activities. In this study, filter-based ambient PM2.5 samples at four stations (one urban, two rural, plus one urban roadside) and PM samples from combustion sources (vehicle exhaust, ship emission, and biomass burning) were collected in the coastal megacity Guangzhou, south China, for determining water soluble organic nitrogen (WSON) along with other organic and inorganic species. The annual average WSON concentrations, as well as the ratios of WSON to water soluble total nitrogen, were all significantly higher at rural sites than urban sites. Average WSON concentrations at the four sites during the wet season were quite near each other, ranging from 0.41 to 0.49 μg/m3; however, they became 2 times higher at the rural sites than at the urban sites during the dry season. Five major sources for WSON were identified through positive matrix factorization analysis. Vehicle emission (29.3%), biomass burning (22.8%), and secondary formation (20.2%) were three dominant sources of WSON at the urban station, while vehicle emission (45.4%) and dust (28.6%) were two dominant sources at the urban roadside station. At the two rural sites biomass burning (51.1% and 34.1%, respectively) and secondary formation (17.8% and 30.5%, respectively) were dominant sources of WSON. Ship emission contributed 8-12% of WSON at the four sites. Natural vegetation seemed to have very minor contribution to WSON.

Nitrogen Fixation by Anaerobes is Stimulated by Low Oxygen and Insensitive to Combined Nitrogen in Coastal Sediments

NASA Astrophysics Data System (ADS)

Jenkins, B. D.; Spinette, R.; Jones, A.; Puggioni, G.; Ehrlich, A.; Brown, S. M.

2016-02-01

Coastal sediments are typically zones of nitrogen removal via coupled nitrification-denitrification pathways. Increasingly, there are reports of nitrogen fixation in anthropogenically impacted sediments containing ample combined nitrogen. In previous work in the estuarine sediments of Narragansett Bay, we found that anaerobes related to Desulfovibrio spp. and in the Desulfuromonadales express genes for nitrogen fixation (nifH). We also determined that nitrogen fixation rates and gene expression are elevated during periods of seasonal hypoxia. Statistical modeling shows that a combination of elevated phytoplankton biomass as with a duration of hypoxia for a week or longer lead to conditions that promote nitrogen fixation as measured by acetylene reduction. Interestingly, diazotrophs closely related to those identified in Narragansett Bay are present and active in other low oxygen systems, suggesting that expansion of hypoxic events may lead to unanticipated consequences for the benthic nitrogen cycle in many ecosystems. To determine controls on diazotrophy on the organismal level, we isolated and sequenced the genomes of two Narragansett Bay members of the Desulfovibrio. We found that these organisms are insensitive to nitrate and urea, as they are missing the genes to assimilate these nitrogen sources. However, their nitrogen fixation is suppressed by increasing concentrations of ammonium, indicating that they may be sensitive to this nitrogen source in the environment. The paradox of detectable nitrogen fixation in the background of measurable ammonium in estuarine systems is a newly emergent theme and suggests that there are complex microbial interactions and/or structure to the nutrient regimes allowing for fixation.

Nutrient co-limited Trichodesmium as nitrogen source or sink in a future ocean.

PubMed

Walworth, Nathan G; Fu, Fei-Xue; Lee, Michael D; Cai, Xiaoni; Saito, Mak A; Webb, Eric A; Hutchins, David A

2017-11-27

Nitrogen-fixing (N 2 ) cyanobacteria provide bioavailable nitrogen to vast ocean regions but are in turn limited by iron (Fe) and/or phosphorus (P), which may force them to employ alternative nitrogen acquisition strategies. The adaptive responses of nitrogen-fixers to global-change drivers under nutrient-limited conditions could profoundly alter the current ocean nitrogen and carbon cycles. Here, we show that the globally-important N 2 -fixer Trichodesmium fundamentally shifts nitrogen metabolism towards organic-nitrogen scavenging following long-term high-CO 2 adaptation under iron and/or phosphorus (co)-limitation. Global shifts in transcripts and proteins under high CO 2 /Fe-limited and/or P-limited conditions include decreases in the N 2 -fixing nitrogenase enzyme, coupled with major increases in enzymes that oxidize trimethylamine (TMA). TMA is an abundant, biogeochemically-important organic nitrogen compound that supports rapid Trichodesmium growth while inhibiting N 2 fixation. In a future high-CO 2 ocean, this whole-cell energetic reallocation towards organic nitrogen scavenging and away from N 2 -fixation may reduce new-nitrogen inputs by Trichodesmium , while simultaneously depleting the scarce fixed-nitrogen supplies of nitrogen-limited open ocean ecosystems. Importance Trichodesmium is among the most biogeochemically-significant microorganisms in the ocean, since it supplies up to 50% of the new nitrogen supporting open ocean food webs. We used Trichodesmium cultures adapted to high CO 2 for 7 years followed by additional exposure to iron and/or phosphorus (co)-limitation. We show that 'future ocean' conditions of high CO 2 and concurrent nutrient limitation(s) fundamentally shift nitrogen metabolism away from nitrogen fixation, and instead towards upregulation of organic-nitrogen scavenging pathways. We show that Trichodesmium's responses to projected future ocean conditions include decreases in the nitrogen-fixing nitrogenase enzymes, coupled with major increases in enzymes that oxidize the abundant organic nitrogen source trimethylamine (TMA). Such a shift towards organic nitrogen uptake and away from nitrogen fixation may substantially reduce new-nitrogen inputs by Trichodesmium to the rest of the microbial community in the future high-CO 2 ocean, with potential global implications for ocean carbon and nitrogen cycling. Copyright © 2017 American Society for Microbiology.

Antiandrogen and Antimicrobial Aspects of Coordination Compounds of Palladium(II), Platinum(II) and Lead(II)

PubMed Central

Joshi, S. C.; Kulshrestha, Shalini; Nagpal, Pooja; Bansal, Anil

2001-01-01

Synthesis, characterization and antimicrobial activities of an interesting class of biologically potent macrocyclic complexes have been carried out. All the complexes have been evaluated for their antimicrobial effects on different species of pathogenic fungi and bacteria. The testicular sperm density, testicular sperm morphology, sperm motility, density of cauda epididymal spermatozoa and fertility in mating trails and biochemical parameters of reproductive organs have been examined and discussed. The resulting biologically active [M(MaLn)(R2)]Cl2 and [Pb(MaLn)(R2)X2] (where, M = PdII or PtII and X = Cl or NO3) type of complexes have been synthesized by the reactions of macrocyclic ligands (MaLn) with metal salts and different diamines in 1:1:1 molar ratio in methanol. Initially the complexes were characterized by elemental analyses, molecular weight determinations and conductivity measurements. The mode of bonding was established on the basis of IR, 1H NMR, 13C NMR, 195Pt NMR, 207Pb NMR, XRD and electronic spectral studies. The macrocyclic ligand coordinates through the four azomethine nitrogen atoms which are bridged by benzil moieties. IR spectra suggest that the pyridine nitrogen is not coordinating. The palladium and platinum complexes exhibit tetracoordinated square-planar geometry, whereas a hexacoordinated octahedral geometry is suggested for lead complexes. PMID:18475989

Dominance of organic nitrogen from headwater streams to large rivers across the conterminous United States

USGS Publications Warehouse

Scott, D.; Harvey, J.; Alexander, R.; Schwarz, G.

2007-01-01

The frequency and magnitude of hypoxic areas in coastal waterbodies are increasing across the globe, partially in response to the increase in nitrogen delivery from the landscape (Diaz, 2001; Rabalais et al., 2002). Although studies of annual total nitrogen and nitrate yields have greatly improved understanding of the contaminant sources that contribute to riverine nitrogen loads (Alexander et al., 2000; Caraco and Cole, 1999), the emphasis of these studies on annual timescales and selected nitrogen forms is not sufficient to understand the factors that control the cycling, transport, and fate of reactive nitrogen. Here we use data from 850 river stations to calculate long-term mean-annual and interannual loads of organic, ammonia, and nitrate-nitrite nitrogen suitable for spatial analysis. We find that organic nitrogen is the dominant nitrogen pool within rivers across most of the United States and is significant even in basins with high anthropogenic sources of nitrogen. Downstream organic nitrogen patterns illustrate that organic nitrogen is an abundant fraction of the nitrogen loads in all regions. Although the longitudinal patterns are not consistent across regions, these patterns are suggestive of cycling between ON and NO3- on seasonal timescales influenced by land use, stream morphology, and riparian connectivity with active floodplains. Future regional studies need to incorporate multinitrogen species at intraannual timescales, as well as stream characteristics beyond channel depth, to elucidate the roles of nitrogen sources and in-stream transformations on the fate and reactivity of riverine nitrogen transported to coastal seas.

Dominance of organic nitrogen from headwater streams to large rivers across the conterminous United States

NASA Astrophysics Data System (ADS)

Scott, Durelle; Harvey, Judson; Alexander, Richard; Schwarz, Gregory

2007-03-01

The frequency and magnitude of hypoxic areas in coastal waterbodies are increasing across the globe, partially in response to the increase in nitrogen delivery from the landscape (Diaz, 2001; Rabalais et al., 2002). Although studies of annual total nitrogen and nitrate yields have greatly improved understanding of the contaminant sources that contribute to riverine nitrogen loads (Alexander et al., 2000; Caraco and Cole, 1999), the emphasis of these studies on annual timescales and selected nitrogen forms is not sufficient to understand the factors that control the cycling, transport, and fate of reactive nitrogen. Here we use data from 850 river stations to calculate long-term mean-annual and interannual loads of organic, ammonia, and nitrate-nitrite nitrogen suitable for spatial analysis. We find that organic nitrogen is the dominant nitrogen pool within rivers across most of the United States and is significant even in basins with high anthropogenic sources of nitrogen. Downstream organic nitrogen patterns illustrate that organic nitrogen is an abundant fraction of the nitrogen loads in all regions. Although the longitudinal patterns are not consistent across regions, these patterns are suggestive of cycling between ON and NO3- on seasonal timescales influenced by land use, stream morphology, and riparian connectivity with active floodplains. Future regional studies need to incorporate multinitrogen species at intraannual timescales, as well as stream characteristics beyond channel depth, to elucidate the roles of nitrogen sources and in-stream transformations on the fate and reactivity of riverine nitrogen transported to coastal seas.

Evolution of nitrogen species in landfill leachates under various stabilization states.

PubMed

Zhao, Renzun; Gupta, Abhinav; Novak, John T; Goldsmith, C Douglas

2017-11-01

In this study, nitrogen species in landfill leachates under various stabilization states were investigated with emphasis on organic nitrogen. Ammonium nitrogen was found to be approximately 1300mg/L in leachates from younger landfill units (less than 10years old), and approximately 500mg/L in leachates from older landfill units (up to 30years old). The concentration and aerobic biodegradability of organic nitrogen decreased with landfill age. A size distribution study showed that most organic nitrogen in landfill leachates is <1kDa. The Lowry protein concentration (mg/L-N) was analyzed and showed a strong correlation with the total organic nitrogen (TON, mg/L-N, R 2 =0.88 and 0.98 for untreated and treated samples, respectively). The slopes of the regression curves of untreated (protein=0.45TON) and treated (protein=0.31TON) leachates indicated that the protein is more biodegradable than the other organic nitrogen species in landfill leachates. XAD-8 resin was employed to isolate the hydrophilic fraction of leachate samples, and it was found that the hydrophilic fraction proportion in terms of organic nitrogen decreased with landfill age. Solid-state 15 N nuclear magnetic resonance (NMR) was utilized to identify the nitrogen species. Proteinaceous materials were found to be readily biodegradable, while heterocyclic nitrogen species were found to be resistant to biodegradation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Carbon and nitrogen isotopic signatures and nitrogen profile to identify adulteration in organic fertilizers.

PubMed

Verenitch, Sergei; Mazumder, Asit

2012-08-29

Recently it has been shown that stable isotopes of nitrogen can be used to discriminate between organic and synthetic fertilizers, but the robustness of the approach is questionable. This work developed a comprehensive method that is far more robust in identifying an adulteration of organic nitrogen fertilizers. Organic fertilizers of various types (manures, composts, blood meal, bone meal, fish meal, products of poultry and plant productions, molasses and seaweed based, and others) available on the North American market were analyzed to reveal the most sensitive criteria as well as their quantitative ranges, which can be used in their authentication. Organic nitrogen fertilizers of known origins with a wide δ(15)N range between -0.55 and 28.85‰ (n = 1258) were characterized for C and N content, δ(13)C, δ(15)N, viscosity, pH, and nitrogen profile (urea, ammonia, organic N, water insoluble N, and NO3). A statistically significant data set of characterized unique organic nitrogen fertilizers (n = 335) of various known origins has been assembled. Deliberately adulterated samples of different types of organic fertilizers mixed with synthetic fertilizers at a wide range of proportions have been used to develop the quantitative critical characteristics of organic fertilizers as the key indicators of their adulteration. Statistical analysis based on the discriminant functions of the quantitative critical characteristics of organic nitrogen fertilizers from 14 different source materials revealed a very high average rate of correct classification. The developed methodology has been successfully used as a source identification tool for numerous commercial nitrogen fertilizers available on the North American market.

Empirical regression models for estimating nitrogen removal in a stormwater wetland during dry and wet days.

PubMed

Guerra, Heidi B; Park, Kisoo; Kim, Youngchul

2013-01-01

Due to the highly variable hydrologic quantity and quality of stormwater runoff, which requires more complex models for proper prediction of treatment, a relatively few and site-specific models for stormwater wetlands have been developed. In this study, regression models based on extensive operational data and wastewater wetlands were adapted to a stormwater wetland receiving both base flow and storm flow from an agricultural area. The models were calibrated in Excel Solver using 15 sets of operational data gathered from random sampling during dry days. The calibrated models were then applied to 20 sets of event mean concentration data from composite sampling during 20 independent rainfall events. For dry days, the models estimated effluent concentrations of nitrogen species that were close to the measured values. However, overestimations during wet days were made for NH(3)-N and total Kjeldahl nitrogen, which resulted from higher hydraulic loading rates and influent nitrogen concentrations during storm flows. The results showed that biological nitrification and denitrification was the major nitrogen removal mechanism during dry days. Meanwhile, during wet days, the prevailing aerobic conditions decreased the denitrification capacity of the wetland, and sedimentation of particulate organic nitrogen and particle-associated forms of nitrogen was increased.

Statistical, graphical, and trend summaries of selected water-quality and streamflow data from the Trinity River near Crockett, Texas, 1964-85

USGS Publications Warehouse

Goss, Richard L.

1987-01-01

As part of the statistical summaries, trend tests were conducted. Several small uptrends were detected for total nitrogen, total organic nitrogen, total ammonia nitrogen, total nitrite nitrogen, total nitrate nitrogen, total organic plus ammonia nitrogen, total nitrite plus nitrate nitrogen, and total phosphorus. Small downtrends were detected for biochemical oxygen demand and dissolved magnesium.

Responses of Surface Ozone Air Quality to Anthropogenic Nitrogen Deposition

NASA Astrophysics Data System (ADS)

Zhang, L.; Zhao, Y.; Tai, A. P. K.; Chen, Y.; Pan, Y.

2017-12-01

Human activities have substantially increased atmospheric deposition of reactive nitrogen to the Earth's surface, inducing unintentional effects on ecosystems with complex environmental and climate consequences. One consequence remaining unexplored is how surface air quality might respond to the enhanced nitrogen deposition through surface-atmosphere exchange. We combine a chemical transport model (GEOS-Chem) and a global land model (Community Land Model) to address this issue with a focus on ozone pollution in the Northern Hemisphere. We consider three processes that are important for surface ozone and can be perturbed by addition of atmospheric deposited nitrogen: emissions of biogenic volatile organic compounds (VOCs), ozone dry deposition, and soil nitrogen oxide (NOx) emissions. We find that present-day anthropogenic nitrogen deposition (65 Tg N a-1 to the land), through enhancing plant growth (represented as increases in vegetation leaf area index (LAI) in the model), could increase surface ozone from increased biogenic VOC emissions, but could also decrease ozone due to higher ozone dry deposition velocities. Meanwhile, deposited anthropogenic nitrogen to soil enhances soil NOx emissions. The overall effect on summer mean surface ozone concentrations show general increases over the globe (up to 1.5-2.3 ppbv over the western US and South Asia), except for some regions with high anthropogenic NOx emissions (0.5-1.0 ppbv decreases over the eastern US, Western Europe, and North China). We compare the surface ozone changes with those driven by the past 20-year climate and historical land use changes. We find that the impacts from anthropogenic nitrogen deposition can be comparable to the climate and land use driven surface ozone changes at regional scales, and partly offset the surface ozone reductions due to land use changes reported in previous studies. Our study emphasizes the complexity of biosphere-atmosphere interactions, which can have important implications for future air quality prediction.

First principles molecular dynamics study of nitrogen vacancy complexes in boronitrene

NASA Astrophysics Data System (ADS)

Ukpong, A. M.; Chetty, N.

2012-07-01

We present the results of first principles molecular dynamics simulations of nitrogen vacancy complexes in monolayer hexagonal boron nitride. The threshold for local structure reconstruction is found to be sensitive to the presence of a substitutional carbon impurity. We show that activated nitrogen dynamics triggers the annihilation of defects in the layer through formation of Stone-Wales-type structures. The lowest energy state of nitrogen vacancy complexes is negatively charged and spin polarized. Using the divacancy complex, we show that their formation induces spontaneous magnetic moments, which is tunable by electron or hole injection. The Fermi level s-resonant defect state is identified as a unique signature of the ground state of the divacancy complex. Due to their ability to enhance structural cohesion, only the divacancy and the nitrogen vacancy carbon-antisite complexes are able to suppress the Fermi level resonant defect state to open a gap between the conduction and valence bands.

Chelate-modified polymers for atmospheric gas chromatography

NASA Technical Reports Server (NTRS)

Christensen, W. W.; Mayer, L. A.; Woeller, F. H. (Inventor)

1980-01-01

Chromatographic materials were developed to serve as the stationary phase of columns used in the separation of atmospheric gases. These materials consist of a crosslinked porous polymer matrix, e.g., a divinylbenzene polymer, into which has been embedded an inorganic complexed ion such as N,N'-ethylene-bis-(acetylacetoniminato)-cobalt (2). Organic nitrogenous bases, such as pyridine, may be incorporated into the chelate polymer complexes to increase their chromatographic utility. With such materials, the process of gas chromatography is greatly simplified, especially in terms of time and quantity of material needed for a gas separation.

40 CFR 60.52b - Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2013 CFR

2013-07-01

... metals, acid gases, organics, and nitrogen oxides. 60.52b Section 60.52b Protection of Environment... § 60.52b Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides. (a... (total mass), corrected to 7 percent oxygen. (d) The limits for nitrogen oxides are specified in...

40 CFR 60.52b - Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2012 CFR

2012-07-01

... metals, acid gases, organics, and nitrogen oxides. 60.52b Section 60.52b Protection of Environment... § 60.52b Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides. (a... (total mass), corrected to 7 percent oxygen. (d) The limits for nitrogen oxides are specified in...

40 CFR 60.52b - Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2011 CFR

2011-07-01

... metals, acid gases, organics, and nitrogen oxides. 60.52b Section 60.52b Protection of Environment... § 60.52b Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides. (a... (total mass), corrected to 7 percent oxygen. (d) The limits for nitrogen oxides are specified in...

40 CFR 60.52b - Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2014 CFR

2014-07-01

... metals, acid gases, organics, and nitrogen oxides. 60.52b Section 60.52b Protection of Environment... § 60.52b Standards for municipal waste combustor metals, acid gases, organics, and nitrogen oxides. (a... (total mass), corrected to 7 percent oxygen. (d) The limits for nitrogen oxides are specified in...

Distributions, Early Diagenesis, and Spatial Characteristics of Amino Acids in Sediments of Multi-Polluted Rivers: A Case Study in the Haihe River Basin, China.

PubMed

Zhao, Yu; Shan, Baoqing; Tang, Wenzhong; Zhang, Hong; Rong, Nan; Ding, Yuekui

2016-02-19

The Haihe River Basin, which is one of the most water-scarce and polluted river basins in China, has abnormally high nitrogen levels. In this study, total hydrolyzable amino acids (THAAs) were measured in surface sediment and sediment core samples in the Haihe River Basin to determine if amino acids were potential sources of ammonium, organic nitrogen, and organic carbon. The rivers were found to be in a state of hypoxia and contain abnormally high levels of ammonium and organic nitrogen. Additionally, NH₃-N was the predominant form of inorganic nitrogen in the surface sediments, while organic nitrogen accounted for 92.53% of sedimentary nitrogen. THAAs-C accounted for 14.92% of the total organic carbon, while THAAs-N accounted for more than 49.59% of organic nitrogen and 45.68% of total nitrogen. The major fraction of THAAs were protein amino acids. Three sediment cores of the most heavily polluted rivers also showed high levels of THAAs. Evaluation of the degradation index (DI) of sedimentary organic matter in sediments evaluated based on the THAAs revealed that most positive DI values were found in the downstream portion of the Ziya River Watershed. Additionally, the DI of surface sediment was correlated with THAAs (r² = 0.763, p < 0.001), as was the DI of sediment cores (r² = 0.773, p < 0.001). Overall, amino acids in sediments were found to be an important potential source of ammonium, organic nitrogen, and organic carbon.

Distributions, Early Diagenesis, and Spatial Characteristics of Amino Acids in Sediments of Multi-Polluted Rivers: A Case Study in the Haihe River Basin, China

PubMed Central

Zhao, Yu; Shan, Baoqing; Tang, Wenzhong; Zhang, Hong; Rong, Nan; Ding, Yuekui

2016-01-01

The Haihe River Basin, which is one of the most water-scarce and polluted river basins in China, has abnormally high nitrogen levels. In this study, total hydrolyzable amino acids (THAAs) were measured in surface sediment and sediment core samples in the Haihe River Basin to determine if amino acids were potential sources of ammonium, organic nitrogen, and organic carbon. The rivers were found to be in a state of hypoxia and contain abnormally high levels of ammonium and organic nitrogen. Additionally, NH3-N was the predominant form of inorganic nitrogen in the surface sediments, while organic nitrogen accounted for 92.53% of sedimentary nitrogen. THAAs-C accounted for 14.92% of the total organic carbon, while THAAs-N accounted for more than 49.59% of organic nitrogen and 45.68% of total nitrogen. The major fraction of THAAs were protein amino acids. Three sediment cores of the most heavily polluted rivers also showed high levels of THAAs. Evaluation of the degradation index (DI) of sedimentary organic matter in sediments evaluated based on the THAAs revealed that most positive DI values were found in the downstream portion of the Ziya River Watershed. Additionally, the DI of surface sediment was correlated with THAAs (r2 = 0.763, p < 0.001), as was the DI of sediment cores (r2 = 0.773, p < 0.001). Overall, amino acids in sediments were found to be an important potential source of ammonium, organic nitrogen, and organic carbon. PMID:26907310

Evaluation of the nephrotoxicity of complex mixtures containing organics and metals: advantages and disadvantages of the use of real-world complex mixtures.

PubMed

Simmons, J E; Yang, R S; Berman, E

1995-02-01

As part of a multidisciplinary health effects study, the nephrotoxicity of complex industrial waste mixtures was assessed. Adult, male Fischer 344 rats were gavaged with samples of complex industrial waste and nephrotoxicity evaluated 24 hr later. Of the 10 tested samples, 4 produced increased absolute or relative kidney weight, or both, coupled with a statistically significant alteration in at least one of the measured serum parameters (urea nitrogen (BUN), creatinine (CREAT), and BUN/CREAT ratio). Although the waste samples had been analyzed for a number of organic chemicals and 7 of the 10 samples were analyzed also for 12 elemental metals and metalloids, their nephrotoxicity was not readily predicted from the partial chemical characterization data. Because the chemical form or speciation of the metals was unknown, it was not possible to estimate their contribution to the observed biological response. Various experimental approaches, including use of real-world complex mixtures, chemically defined synthetic mixtures, and simple mixtures, will be necessary to adequately determine the potential human health risk from exposure to complex chemical mixtures.

Multiple metabolisms constrain the anaerobic nitrite budget in the Eastern Tropical South Pacific

NASA Astrophysics Data System (ADS)

Babbin, Andrew R.; Peters, Brian D.; Mordy, Calvin W.; Widner, Brittany; Casciotti, Karen L.; Ward, Bess B.

2017-02-01

The Eastern Tropical South Pacific is one of the three major oxygen deficient zones (ODZs) in the global ocean and is responsible for approximately one third of marine water column nitrogen loss. It is the best studied of the ODZs and, like the others, features a broad nitrite maximum across the low oxygen layer. How the microbial processes that produce and consume nitrite in anoxic waters interact to sustain this feature is unknown. Here we used 15N-tracer experiments to disentangle five of the biologically mediated processes that control the nitrite pool, including a high-resolution profile of nitrogen loss rates. Nitrate reduction to nitrite likely depended on organic matter fluxes, but the organic matter did not drive detectable rates of denitrification to N2. However, multiple lines of evidence show that denitrification is important in shaping the biogeochemistry of this ODZ. Significant rates of anaerobic nitrite oxidation at the ODZ boundaries were also measured. Iodate was a potential oxidant that could support part of this nitrite consumption pathway. We additionally observed N2 production from labeled cyanate and postulate that anammox bacteria have the ability to harness cyanate as another form of reduced nitrogen rather than relying solely on ammonification of complex organic matter. The balance of the five anaerobic rates measured—anammox, denitrification, nitrate reduction, nitrite oxidation, and dissimilatory nitrite reduction to ammonium—is sufficient to reproduce broadly the observed nitrite and nitrate profiles in a simple one-dimensional model but requires an additional source of reduced nitrogen to the deeper ODZ to avoid ammonium overconsumption.

Formation of nitrogenated organic aerosols in the Titan upper atmosphere.

PubMed

Imanaka, Hiroshi; Smith, Mark A

2010-07-13

Many aspects of the nitrogen fixation process by photochemistry in the Titan atmosphere are not fully understood. The recent Cassini mission revealed organic aerosol formation in the upper atmosphere of Titan. It is not clear, however, how much and by what mechanism nitrogen is incorporated in Titan's organic aerosols. Using tunable synchrotron radiation at the Advanced Light Source, we demonstrate the first evidence of nitrogenated organic aerosol production by extreme ultraviolet-vacuum ultraviolet irradiation of a N(2)/CH(4) gas mixture. The ultrahigh-mass-resolution study with laser desorption ionization-Fourier transform-ion cyclotron resonance mass spectrometry of N(2)/CH(4) photolytic solid products at 60 and 82.5 nm indicates the predominance of highly nitrogenated compounds. The distinct nitrogen incorporations at the elemental abundances of H(2)C(2)N and HCN, respectively, are suggestive of important roles of H(2)C(2)N/HCCN and HCN/CN in their formation. The efficient formation of unsaturated hydrocarbons is observed in the gas phase without abundant nitrogenated neutrals at 60 nm, and this is confirmed by separately using (13)C and (15)N isotopically labeled initial gas mixtures. These observations strongly suggest a heterogeneous incorporation mechanism via short lived nitrogenated reactive species, such as HCCN radical, for nitrogenated organic aerosol formation, and imply that substantial amounts of nitrogen is fixed as organic macromolecular aerosols in Titan's atmosphere.

Formation of nitrogenated organic aerosols in the Titan upper atmosphere

PubMed Central

Imanaka, Hiroshi; Smith, Mark A.

2010-01-01

Many aspects of the nitrogen fixation process by photochemistry in the Titan atmosphere are not fully understood. The recent Cassini mission revealed organic aerosol formation in the upper atmosphere of Titan. It is not clear, however, how much and by what mechanism nitrogen is incorporated in Titan’s organic aerosols. Using tunable synchrotron radiation at the Advanced Light Source, we demonstrate the first evidence of nitrogenated organic aerosol production by extreme ultraviolet–vacuum ultraviolet irradiation of a N2/CH4 gas mixture. The ultrahigh-mass-resolution study with laser desorption ionization-Fourier transform-ion cyclotron resonance mass spectrometry of N2/CH4 photolytic solid products at 60 and 82.5 nm indicates the predominance of highly nitrogenated compounds. The distinct nitrogen incorporations at the elemental abundances of H2C2N and HCN, respectively, are suggestive of important roles of H2C2N/HCCN and HCN/CN in their formation. The efficient formation of unsaturated hydrocarbons is observed in the gas phase without abundant nitrogenated neutrals at 60 nm, and this is confirmed by separately using 13C and 15N isotopically labeled initial gas mixtures. These observations strongly suggest a heterogeneous incorporation mechanism via short lived nitrogenated reactive species, such as HCCN radical, for nitrogenated organic aerosol formation, and imply that substantial amounts of nitrogen is fixed as organic macromolecular aerosols in Titan’s atmosphere. PMID:20616074

Perennial Antarctic lake ice: an oasis for life in a polar desert

NASA Technical Reports Server (NTRS)

Priscu, J. C.; Fritsen, C. H.; Adams, E. E.; Giovannoni, S. J.; Paerl, H. W.; McKay, C. P.; Doran, P. T.; Gordon, D. A.; Lanoil, B. D.; Pinckney, J. L.

1998-01-01

The permanent ice covers of Antarctic lakes in the McMurdo Dry Valleys develop liquid water inclusions in response to solar heating of internal aeolian-derived sediments. The ice sediment particles serve as nutrient (inorganic and organic)-enriched microzones for the establishment of a physiologically and ecologically complex microbial consortium capable of contemporaneous photosynthesis, nitrogen fixation, and decomposition. The consortium is capable of physically and chemically establishing and modifying a relatively nutrient- and organic matter-enriched microbial "oasis" embedded in the lake ice cover.

Perennial Antarctic lake ice: an oasis for life in a polar desert.

PubMed

Priscu, J C; Fritsen, C H; Adams, E E; Giovannoni, S J; Paerl, H W; McKay, C P; Doran, P T; Gordon, D A; Lanoil, B D; Pinckney, J L

1998-06-26

The permanent ice covers of Antarctic lakes in the McMurdo Dry Valleys develop liquid water inclusions in response to solar heating of internal aeolian-derived sediments. The ice sediment particles serve as nutrient (inorganic and organic)-enriched microzones for the establishment of a physiologically and ecologically complex microbial consortium capable of contemporaneous photosynthesis, nitrogen fixation, and decomposition. The consortium is capable of physically and chemically establishing and modifying a relatively nutrient- and organic matter-enriched microbial "oasis" embedded in the lake ice cover.

40 CFR 60.33b - Emission guidelines for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2012 CFR

2012-07-01

... combustor metals, acid gases, organics, and nitrogen oxides. 60.33b Section 60.33b Protection of Environment..., acid gases, organics, and nitrogen oxides. (a) The emission limits for municipal waste combustor metals... oxygen. (d) For approval, a State plan shall include emission limits for nitrogen oxides at least as...

40 CFR 60.33b - Emission guidelines for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2013 CFR

2013-07-01

... combustor metals, acid gases, organics, and nitrogen oxides. 60.33b Section 60.33b Protection of Environment..., acid gases, organics, and nitrogen oxides. (a) The emission limits for municipal waste combustor metals... oxygen. (d) For approval, a State plan shall include emission limits for nitrogen oxides at least as...

40 CFR 60.33b - Emission guidelines for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2011 CFR

2011-07-01

... combustor metals, acid gases, organics, and nitrogen oxides. 60.33b Section 60.33b Protection of Environment..., acid gases, organics, and nitrogen oxides. (a) The emission limits for municipal waste combustor metals... oxygen. (d) For approval, a State plan shall include emission limits for nitrogen oxides at least as...

40 CFR 60.33b - Emission guidelines for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2014 CFR

2014-07-01

... combustor metals, acid gases, organics, and nitrogen oxides. 60.33b Section 60.33b Protection of Environment..., acid gases, organics, and nitrogen oxides. (a) The emission limits for municipal waste combustor metals... oxygen. (d) For approval, a State plan shall include emission limits for nitrogen oxides at least as...

The comet-like composition of a protoplanetary disk as revealed by complex cyanides.

PubMed

Öberg, Karin I; Guzmán, Viviana V; Furuya, Kenji; Qi, Chunhua; Aikawa, Yuri; Andrews, Sean M; Loomis, Ryan; Wilner, David J

2015-04-09

Observations of comets and asteroids show that the solar nebula that spawned our planetary system was rich in water and organic molecules. Bombardment brought these organics to the young Earth's surface. Unlike asteroids, comets preserve a nearly pristine record of the solar nebula composition. The presence of cyanides in comets, including 0.01 per cent of methyl cyanide (CH3CN) with respect to water, is of special interest because of the importance of C-N bonds for abiotic amino acid synthesis. Comet-like compositions of simple and complex volatiles are found in protostars, and can readily be explained by a combination of gas-phase chemistry (to form, for example, HCN) and an active ice-phase chemistry on grain surfaces that advances complexity. Simple volatiles, including water and HCN, have been detected previously in solar nebula analogues, indicating that they survive disk formation or are re-formed in situ. It has hitherto been unclear whether the same holds for more complex organic molecules outside the solar nebula, given that recent observations show a marked change in the chemistry at the boundary between nascent envelopes and young disks due to accretion shocks. Here we report the detection of the complex cyanides CH3CN and HC3N (and HCN) in the protoplanetary disk around the young star MWC 480. We find that the abundance ratios of these nitrogen-bearing organics in the gas phase are similar to those in comets, which suggests an even higher relative abundance of complex cyanides in the disk ice. This implies that complex organics accompany simpler volatiles in protoplanetary disks, and that the rich organic chemistry of our solar nebula was not unique.

The comet-like composition of a protoplanetary disk as revealed by complex cyanides

NASA Astrophysics Data System (ADS)

Öberg, Karin I.; Guzmán, Viviana V.; Furuya, Kenji; Qi, Chunhua; Aikawa, Yuri; Andrews, Sean M.; Loomis, Ryan; Wilner, David J.

2015-04-01

Observations of comets and asteroids show that the solar nebula that spawned our planetary system was rich in water and organic molecules. Bombardment brought these organics to the young Earth's surface. Unlike asteroids, comets preserve a nearly pristine record of the solar nebula composition. The presence of cyanides in comets, including 0.01 per cent of methyl cyanide (CH3CN) with respect to water, is of special interest because of the importance of C-N bonds for abiotic amino acid synthesis. Comet-like compositions of simple and complex volatiles are found in protostars, and can readily be explained by a combination of gas-phase chemistry (to form, for example, HCN) and an active ice-phase chemistry on grain surfaces that advances complexity. Simple volatiles, including water and HCN, have been detected previously in solar nebula analogues, indicating that they survive disk formation or are re-formed in situ. It has hitherto been unclear whether the same holds for more complex organic molecules outside the solar nebula, given that recent observations show a marked change in the chemistry at the boundary between nascent envelopes and young disks due to accretion shocks. Here we report the detection of the complex cyanides CH3CN and HC3N (and HCN) in the protoplanetary disk around the young star MWC 480. We find that the abundance ratios of these nitrogen-bearing organics in the gas phase are similar to those in comets, which suggests an even higher relative abundance of complex cyanides in the disk ice. This implies that complex organics accompany simpler volatiles in protoplanetary disks, and that the rich organic chemistry of our solar nebula was not unique.

Improvements to the Characterization of Organic Nitrogen Chemistry

EPA Science Inventory

Excess atmospheric nitrogen deposition can cause significant harmful effects to ecosystems. Organic nitrogen deposition can be an important contributor to the total nitrogen budget, contributing 10-30%, however there are large uncertainties in the chemistry and deposition of thes...

Seasonal changes of concentrations of inorganic and organic nitrogen in coastal marine sediments

NASA Astrophysics Data System (ADS)

Yamada, Hisashi; Kayama, Mitsu; Fujisawa, Kuniyasu

1987-05-01

The seasonal fluctuations of the concentration of nitrogenous compounds in sediments was investigated for three regions of the Seto Inland Sea in Japan; the variation of nitrogenous compounds in sediments was also studied in a laboratory experiment. The amounts of ammonium, dissolved organic nitrogen, nitrite and nitrate, as percentages of the dissolved total nitrogen of the interstitial water, were in the ranges of 47-99%, 10-50%, 0·1-0·6% and 0·3-4·1%, respectively. Ammonium was the major component and organic nitrogen was the next most important. The concentrations of these nitrogenous compounds changed seasonally: dissolved total nitrogen was higher in the warm month of September than in May; ammonium increased in warm months and decreased in cold months, but nitrite and nitrate increased in cold months. It was possible to explain the seasonal fluctuation of nitrogenous compounds in terms of the rates of the metabolic pathways of nitrogen in the sediments. Ammonium was not necessarily correlated with dissolved organic nitrogen. From this, it was considered that ammonium did not occur from solubilization of particulate organic nitrogen followed by mineralization, but from direct mineralization of particulate organic nitrogen in sediments. For the sediments of Suho Nada, Hiuchi Nada and station B-47 in Beppu Bay, the ratio of dissolved ammonium to adsorbed ammonium in the sediments was in the range 10-25%, but the ratio was 60-70% of adsorbed ammonium in the considerably anaerobic sediments at station B-45 in Beppu Bay. The ratio of dissolved ammonium to adsorbed ammonium increased with the increase of the concentration of sulfide in sediments. It was recognized that the anaerobic conditions of the sediments led to the dissolution of adsorbed ammonium.

Mechanisms for retention of bioavailable nitrogen in volcanic rainforest soils

NASA Astrophysics Data System (ADS)

Huygens, Dries; Boeckx, Pascal; Templer, Pamela; Paulino, Leandro; van Cleemput, Oswald; Oyarzún, Carlos; Müller, Christoph; Godoy, Roberto

2008-08-01

Nitrogen cycling is an important aspect of forest ecosystem functioning. Pristine temperate rainforests have been shown to produce large amounts of bioavailable nitrogen, but despite high nitrogen turnover rates, loss of bioavailable nitrogen is minimal in these ecosystems. This tight nitrogen coupling is achieved through fierce competition for bioavailable nitrogen by abiotic processes, soil microbes and plant roots, all of which transfer bioavailable nitrogen to stable nitrogen sinks, such as soil organic matter and above-ground forest vegetation. Here, we use a combination of in situ 15N isotope dilution and 15N tracer techniques in volcanic soils of a temperate evergreen rainforest in southern Chile to further unravel retention mechanisms for bioavailable nitrogen. We find three processes that contribute significantly to nitrogen bioavailability in rainforest soils: heterotrophic nitrate production, nitrate turnover into ammonium and into a pool of dissolved organic nitrogen that is not prone to leaching loss, and finally, the decoupling of dissolved inorganic nitrogen turnover and leaching losses of dissolved organic nitrogen. Identification of these biogeochemical processes helps explain the retention of bioavailable nitrogen in pristine temperate rainforests.

[Mechanisms for the increased fertilizer nitrogen use efficiency of rice in wheat-rice rotation system under combined application of inorganic and organic fertilizers].

PubMed

Liu, Yi-Ren; Li, Xiang; Yu, Jie; Shen, Qi-Rong; Xu, Yang-Chun

2012-01-01

A pot experiment was conducted to study the effects of combined application of organic and inorganic fertilizers on the nitrogen uptake by rice and the nitrogen supply by soil in a wheat-rice rotation system, and approach the mechanisms for the increased fertilizer nitrogen use efficiency of rice under the combined fertilization from the viewpoint of microbiology. Comparing with applying inorganic fertilizers, combined application of organic and inorganic fertilizers decreased the soil microbial biomass carbon and nitrogen and soil mineral nitrogen contents before tillering stage, but increased them significantly from heading to filling stage. Under the combined fertilization, the dynamics of soil nitrogen supply matched best the dynamics of rice nitrogen uptake and utilization, which promoted the nitrogen accumulation in rice plant and the increase of rice yield and biomass, and increased the fertilizer nitrogen use efficiency of rice significantly. Combined application of inorganic and organic fertilizers also promoted the propagation of soil microbes, and consequently, more mineral nitrogen in soil was immobilized by the microbes at rice early growth stage, and the immobilized nitrogen was gradually released at the mid and late growth stages of rice, being able to better satisfy the nitrogen demand of rice in its various growth and development stages.

Organic Matter in the Outer Solar System

NASA Technical Reports Server (NTRS)

Cruiskshank, Dale P.; DeVincenzi, Donald L. (Technical Monitor)

2000-01-01

Many solid bodies in the outer Solar System are covered with ices of various compositions, including water, carbon dioxide, methane, nitrogen, and other molecules that are solid at the low temperatures that prevail there. These ices have all been detected by remote sensing observations made with telescopes on Earth, or more recently, spacecraft in orbit (notably Galileo at Jupiter). The data also reveal other solid materials that could be minerals or complex carbon-bearing organic molecules. A study in progress using large ground-based telescopes to acquire infrared spectroscopic data, and laboratory results on the optical properties of complex organic matter, seeks to identify the non-icy materials on several satellites of Saturn, Uranus, and Neptune. The work on the satellites of Saturn is in part preparatory to the Cassini spacecraft investigation of the Saturn system, which will begin in 2004 and extend for four years.

Restoration and Purification of Dissolved Organic Nitrogen by Bacteria and Phytoremediation in Shallow Eutrophic Lakes Sediments

NASA Astrophysics Data System (ADS)

Li, Xin; Yue, Yi

2018-06-01

Endogenous organic nitrogen loadings in lake sediments have increased with human activity in recent decades. A 6-month field study from two disparate shallow eutrophic lakes could partly reveal these issues by analysing seasonal variations of biodegradation and phytoremediation in the sediment. This paper describes the relationship between oxidation reduction potential, temperature, microbial activity and phytoremediation in nitrogen cycling by calculation degradative index of dissolved organic nitrogen and amino acid decomposition. The index was being positive in winter and negative in summer while closely positive correlated with biodegradation. Our analysis revealed that rather than anoxic condition, biomass is the primary factor to dissolved organic nitrogen distribution and decomposition. Some major amino acids statistics also confirm the above view. The comparisons of organic nitrogen and amino acid in abundance and seasons in situ provides that demonstrated plants cue important for nitrogen removal by their roots adsorption and immobilization. In conclusion, enhanced microbial activity and phytoremediation with the seasons will reduce the endogenous nitrogen loadings by the coupled mineralization and diagenetic process.

Molecular signature of organic nitrogen in septic-impacted groundwater

USGS Publications Warehouse

Arnold, William A.; Longnecker, Krista; Kroeger, Kevin D.; Kujawinski, Elizabeth B.

2014-01-01

Dissolved inorganic and organic nitrogen levels are elevated in aquatic systems due to anthropogenic activities. Dissolved organic nitrogen (DON) arises from various sources, and its impact could be more clearly constrained if specific sources were identified and if the molecular-level composition of DON were better understood. In this work, the pharmaceutical carbamazepine was used to identify septic-impacted groundwater in a coastal watershed. Using ultrahigh resolution mass spectrometry data, the nitrogen-containing features of the dissolved organic matter in septic-impacted and non-impacted samples were compared. The septic-impacted groundwater samples have a larger abundance of nitrogen-containing formulas. Impacted samples have additional DON features in the regions ascribed as ‘protein-like’ and ‘lipid-like’ in van Krevelen space and have more intense nitrogen-containing features in a specific region of a carbon versus mass plot. These features are potential indicators of dissolved organic nitrogen arising from septic effluents, and this work suggests that ultrahigh resolution mass spectrometry is a valuable tool to identify and characterize sources of DON.

Microbiome characterization of MFCs used for the treatment of swine manure.

PubMed

Vilajeliu-Pons, Anna; Puig, Sebastià; Pous, Narcís; Salcedo-Dávila, Inmaculada; Bañeras, Lluís; Balaguer, Maria Dolors; Colprim, Jesús

2015-05-15

Conventional swine manure treatment is performed by anaerobic digestion, but nitrogen is not treated. Microbial Fuel Cells (MFCs) allow organic matter and nitrogen removal with concomitant electricity production. MFC microbiomes treating industrial wastewaters as swine manure have not been characterized. In this study, a multidisciplinary approach allowed microbiome relation with nutrient removal capacity and electricity production. Two different MFC configurations (C-1 and C-2) were used to treat swine manure. In C-1, the nitrification and denitrification processes took place in different compartments, while in C-2, simultaneous nitrification-denitrification occurred in the cathode. Clostridium disporicum and Geobacter sulfurreducens were identified in the anode compartments of both systems. C. disporicum was related to the degradation of complex organic matter compounds and G. sulfurreducens to electricity production. Different nitrifying bacteria populations were identified in both systems because of the different operational conditions. The highest microbial diversity was detected in cathode compartments of both configurations, including members of Bacteroidetes, Chloroflexiaceae and Proteobacteria. These communities allowed similar removal rates of organic matter (2.02-2.09 kg COD m(-3)d(-1)) and nitrogen (0.11-0.16 kg Nm(-3)d(-1)) in both systems. However, they differed in the generation of electric energy (20 and 2 mW m(-3) in C-1 and C-2, respectively). Copyright © 2015 Elsevier B.V. All rights reserved.

Improvements to the treatment of organic nitrogen chemistry & deposition in CMAQ

EPA Science Inventory

Excess atmospheric nitrogen deposition can cause significant harmful effects to ecosystems. Organic nitrogen deposition can be an important contributor to the total nitrogen budget, contributing 10-30%, however there are large uncertainties in the chemistry and deposition of thes...

Improvements to the characterization of organic nitrogen chemistry and deposition in CMAQ

EPA Science Inventory

Excess atmospheric nitrogen deposition can cause significant harmful effects to ecosystems. Organic nitrogen deposition can be an important contributor to the total nitrogen budget, contributing 10-30%, however there are large uncertainties in the chemistry and deposition of thes...

The Role of Atmospheric Organic Nitrogen in Forest Nitrogen Cycling

NASA Astrophysics Data System (ADS)

Lockwood, A.; Shepson, P.; Rhodes, D.

2003-12-01

Changes in the global climate and atmosphere cause significant effects to the biosphere. Forests respond to these global changes in various ways which all can affect their ability to store carbon, which in turn impacts climate change. Many temperate latitude forests are nitrogen-limited. A current working hypothesis is that atmospheric nitrogen compounds that are deposited to the canopy may be directly utilized by the plant as a nitrogen source. A significant fraction of atmospheric reactive nitrogen that can be deposited is organic. Organic nitrogen deposition is not well characterized nor have the ecological consequences been assessed. Our hypothesis is that organic nitrogen deposition to the canopy is significant, and that that nitrogen is utilized by trees. Fumigation experiments were conducted with 14N and 15N-labeled organic nitrates (focusing on 1-nitrooxy-3-methyl butane as a surrogate for isoprene nitrates) to determine if and how that nitrogen gets incorporated into the leaves by detecting the 15N-labeled leaf amino acids. This research builds on work completed during past summer intensives as part of the Program for Research on Oxidants: PHotochemistry, Emissions, and Transport (PROPHET), and begins the next stage of research as part of the Biosphere Atmosphere Research & Training program (BART) at the University of Michigan Biological Station (UMBS). The overall goal of the new effort, the Biosphere Exchange of Atmospheric Carbon and Odd Nitrogen (BEACON) program, is to evaluate the interactive roles of the atmosphere and forest in the coupling of the carbon and nitrogen cycles.

Effect of organic matter supplementation on nitrogen transformations in soils. I. Chemical and bacteriological changes.

PubMed

Abd-el-Malek, Y; Monib, M; Hosny, I; Girgis, S A

1979-01-01

The effect of supplementation with different organic materials on nitrogen transformations and on certain bacterial groups in soil was studied. Addition of wide C/N ratio organic matter, sawdust and maize stalks prevented NO3-N from being lost through leaching out or dentrification and favoured the development of Azotobacter and N2-fixing clostridia that in turn resulted in marked gains in nitrogen through N2-fixation. Nitrifying bacteria were adversely affected. Application of such materials together with high amounts of NH4NO3 lessened nitrogen losses in drainage water but increased losses through denitrification. Nitrogen-rich organic matter resulted in higher losses in nitrates from soils in comparison to those of wide C/N ratio organic materials.

The development of a new technical platform to measure soil organic nitrogen cycling processes by microbes

NASA Astrophysics Data System (ADS)

Hu, Yuntao; Richter, Andreas; Wanek, Wolfgang

2016-04-01

Soil organic matter (SOM) decomposition is one of the most important processes of the global nitrogen cycle, having strong implications on soil N availability, terrestrial carbon cycling and soil carbon sequestration. During SOM decomposition low-molecular weight organic nitrogen (LMWON) is released which can be taken up by microbes (and plants). The breakdown of high-molecular weight organic nitrogen (HMWON, e.g. proteins, peptidoglycan, chitin, nucleic acids) represents the bottleneck of soil HMWON decomposition and is performed by extracellular enzymes released mainly by soil microorganisms. Despite that, the current understanding of the controls of these processes is incomplete. The only way to measure gross decomposition rates of these polymers is to use isotope pool dilution (IPD) techniques. In IPD approaches the product pool is isotopically enriched (by e.g. 15N) and the isotope dilution of this pool is measured over time. We have pioneered an IPD for protein and cellulose depolymerization, but IPD approaches for other polymers, specifically for important microbial necromass components such as chitin (fungi) and peptidoglycan (bacteria), or nucleic acids have not yet been developed. Here we present a workflow based on a universally applicable technical platform that allows to estimate the gross depolymerization rate of SOM (HMWON) at the molecular level, using ultra high performance liquid chromatography/high resolution Orbitrap mass spectrometry (UPLC/HRMS) combined with IPD techniques. The necessary isotopically labeled organic polymers (chitin, peptidoglycan and others) are extracted from laboratory bacterial and fungal cultures grown in fully isotopically labeled nutrient media (15N, 13C or both). A purification scheme for the different polymers is currently established. Labeled potential decomposition products (e.g. amino sugars and muropeptides from peptidoglycan, amino sugars and chitooligosaccharides from chitin, nucleotides and nucleosides from nucleic acids) are prepared by enzymatic and/or acid digestion of the polymers. Different UPLC separation columns (Hypercarb, HiliC and C18) make it possible to separate more than 100 related monomers and oligomers produced during polymer decomposition, a prerequisite for analyzing the concentrations and isotope kinetics of decomposition products in complex soil samples. The benchtop Orbitrap mass analyzer has a nominal mass resolving power of 100,000 (FWHM at m/z 200), which enables us to separate compounds that are 13C- and 15N-labelled (mass difference: 0.00632) in the same compound, allowing tracing carbon and nitrogen isotopes in the same compound in IPD experiments. With the accurate masses, retention times and the isotopic pattern we can quantify and qualify the target decomposition products and their isotope kinetics during soil incubation experiments. This will enable us to estimate in situ decomposition rates of the major organic nitrogen polymers in soils, allowing new insights into the major controls of the most important step in soil organic nitrogen recycling.

Crystal structures of the apo and ATP bound Mycobacterium tuberculosis nitrogen regulatory PII protein

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shetty, Nishant D.; Reddy, Manchi C.M.; Palaninathan, Satheesh K.

2010-10-11

PII constitutes a family of signal transduction proteins that act as nitrogen sensors in microorganisms and plants. Mycobacterium tuberculosis (Mtb) has a single homologue of PII whose precise role has as yet not been explored. We have solved the crystal structures of the Mtb PII protein in its apo and ATP bound forms to 1.4 and 2.4 {angstrom} resolutions, respectively. The protein forms a trimeric assembly in the crystal lattice and folds similarly to the other PII family proteins. The Mtb PII:ATP binary complex structure reveals three ATP molecules per trimer, each bound between the base of the T-loop ofmore » one subunit and the C-loop of the neighboring subunit. In contrast to the apo structure, at least one subunit of the binary complex structure contains a completely ordered T-loop indicating that ATP binding plays a role in orienting this loop region towards target proteins like the ammonium transporter, AmtB. Arg38 of the T-loop makes direct contact with the {gamma}-phosphate of the ATP molecule replacing the Mg{sup 2+} position seen in the Methanococcus jannaschii GlnK1 structure. The C-loop of a neighboring subunit encloses the other side of the ATP molecule, placing the GlnK specific C-terminal 3{sub 10} helix in the vicinity. Homology modeling studies with the E. coli GlnK:AmtB complex reveal that Mtb PII could form a complex similar to the complex in E. coli. The structural conservation and operon organization suggests that the Mtb PII gene encodes for a GlnK protein and might play a key role in the nitrogen regulatory pathway.« less

Functional indicators of response mechanisms to nitrogen deposition, ozone, and their interaction in two Mediterranean tree species

PubMed Central

Palma, Adriano; Salvatori, Elisabetta; Basile, Adriana; Maresca, Viviana; Asadi Karam, Elham; Manes, Fausto

2017-01-01

The effects of nitrogen (N) deposition, tropospheric ozone (O3) and their interaction were investigated in two Mediterranean tree species, Fraxinus ornus L. (deciduous) and Quercus ilex L. (evergreen), having different leaf habits and resource use strategies. An experiment was conducted under controlled condition to analyse how nitrogen deposition affects the ecophysiological and biochemical traits, and to explore how the nitrogen-induced changes influence the response to O3. For both factors we selected realistic exposures (20 kg N ha-1 yr-1 and 80 ppb h for nitrogen and O3, respectively), in order to elucidate the mechanisms implemented by the plants. Nitrogen addition resulted in higher nitrogen concentration at the leaf level in F. ornus, whereas a slight increase was detected in Q. ilex. Nitrogen enhanced the maximum rate of assimilation and ribulose 1,5-bisphosphate regeneration in both species, whereas it influenced the light harvesting complex only in the deciduous F. ornus that was also affected by O3 (reduced assimilation rate and accelerated senescence-related processes). Conversely, Q. ilex developed an avoidance mechanism to cope with O3, confirming a substantial O3 tolerance of this species. Nitrogen seemed to ameliorate the harmful effects of O3 in F. ornus: the hypothesized mechanism of action involved the production of nitrogen oxide as the first antioxidant barrier, followed by enzymatic antioxidant response. In Q. ilex, the interaction was not detected on gas exchange and photosystem functionality; however, in this species, nitrogen might stimulate an alternative antioxidant response such as the emission of volatile organic compounds. Antioxidant enzyme activity was lower in plants treated with both O3 and nitrogen even though reactive oxygen species production did not differ between the treatments. PMID:28973038

Functional indicators of response mechanisms to nitrogen deposition, ozone, and their interaction in two Mediterranean tree species.

PubMed

Fusaro, Lina; Palma, Adriano; Salvatori, Elisabetta; Basile, Adriana; Maresca, Viviana; Asadi Karam, Elham; Manes, Fausto

2017-01-01

The effects of nitrogen (N) deposition, tropospheric ozone (O3) and their interaction were investigated in two Mediterranean tree species, Fraxinus ornus L. (deciduous) and Quercus ilex L. (evergreen), having different leaf habits and resource use strategies. An experiment was conducted under controlled condition to analyse how nitrogen deposition affects the ecophysiological and biochemical traits, and to explore how the nitrogen-induced changes influence the response to O3. For both factors we selected realistic exposures (20 kg N ha-1 yr-1 and 80 ppb h for nitrogen and O3, respectively), in order to elucidate the mechanisms implemented by the plants. Nitrogen addition resulted in higher nitrogen concentration at the leaf level in F. ornus, whereas a slight increase was detected in Q. ilex. Nitrogen enhanced the maximum rate of assimilation and ribulose 1,5-bisphosphate regeneration in both species, whereas it influenced the light harvesting complex only in the deciduous F. ornus that was also affected by O3 (reduced assimilation rate and accelerated senescence-related processes). Conversely, Q. ilex developed an avoidance mechanism to cope with O3, confirming a substantial O3 tolerance of this species. Nitrogen seemed to ameliorate the harmful effects of O3 in F. ornus: the hypothesized mechanism of action involved the production of nitrogen oxide as the first antioxidant barrier, followed by enzymatic antioxidant response. In Q. ilex, the interaction was not detected on gas exchange and photosystem functionality; however, in this species, nitrogen might stimulate an alternative antioxidant response such as the emission of volatile organic compounds. Antioxidant enzyme activity was lower in plants treated with both O3 and nitrogen even though reactive oxygen species production did not differ between the treatments.

Improvements to the characterization of organic nitrogen chemistry and deposition in CMAQ (CMAS Presentation)

EPA Science Inventory

Excess atmospheric nitrogen deposition can cause significant harmful effects to ecosystems. Organic nitrogen deposition can be an important contributor to the total nitrogen budget, contributing 10-30%, however there are large uncertainties in the chemistry and deposition of thes...

Effects of combined application of organic and inorganic fertilizers plus nitrification inhibitor DMPP on nitrogen runoff loss in vegetable soils.

PubMed

Yu, Qiaogang; Ma, Junwei; Zou, Ping; Lin, Hui; Sun, Wanchun; Yin, Jianzhen; Fu, Jianrong

2015-01-01

The application of nitrogen fertilizers leads to various ecological problems such as large amounts of nitrogen runoff loss causing water body eutrophication. The proposal that nitrification inhibitors could be used as nitrogen runoff loss retardants has been suggested in many countries. In this study, simulated artificial rainfall was used to illustrate the effect of the nitrification inhibitor DMPP (3,4-dimethyl pyrazole phosphate) on nitrogen loss from vegetable fields under combined organic and inorganic nitrogen fertilizer application. The results showed that during the three-time simulated artificial rainfall period, the ammonium nitrogen content in the surface runoff water collected from the DMPP application treatment increased by 1.05, 1.13, and 1.10 times compared to regular organic and inorganic combined fertilization treatment, respectively. In the organic and inorganic combined fertilization with DMPP addition treatment, the nitrate nitrogen content decreased by 38.8, 43.0, and 30.1% in the three simulated artificial rainfall runoff water, respectively. Besides, the nitrite nitrogen content decreased by 95.4, 96.7, and 94.1% in the three-time simulated artificial rainfall runoff water, respectively. A robust decline in the nitrate and nitrite nitrogen surface runoff loss could be observed in the treatments after the DMPP addition. The nitrite nitrogen in DMPP addition treatment exhibited a significant low level, which is near to the no fertilizer application treatment. Compared to only organic and inorganic combined fertilizer treatment, the total inorganic nitrogen runoff loss declined by 22.0 to 45.3% in the organic and inorganic combined fertilizers with DMPP addition treatment. Therefore, DMPP could be used as an effective nitrification inhibitor to control the soil ammonium oxidation in agriculture and decline the nitrogen runoff loss, minimizing the nitrogen transformation risk to the water body and being beneficial for the ecological environment.

Unraveling the nitrogen isotopic signature of symbiotic corals

NASA Astrophysics Data System (ADS)

Devlin, Q.; Swart, P. K.; Altabet, M. A.

2013-12-01

Coral reefs thrive in shallow, tropical, low nutrient waters. Nutrient inputs to a reef environment are often interpreted by measuring the nitrogen isotopic composition of reef organisms. The δ15N signature of scleractinian corals has been historically measured to assess the presence of anthropogenic influences such as sewage and fertilizer runoff. The majority of reef building corals form a symbiotic partnership with the dinoflagellate algae, Symbiodinium microadriaticum. The δ15N signature of symbiotic corals is complex as it is not only dependent on nitrogen acquisition by the coral, but also by the algal symbionts that reside within the gastrodermal tissue layer. The relationship between the δ15N of dissolved inorganic nitrogen (DIN) and the δ15N of coral tissue has not been established. The aim of this study is to identify considerations necessary when interpreting nitrogen sources based on δ15N of coral tissue. Incubations were carried out in order to measure isotopic fractionation associated with nitrate and ammonium incorporation by the Pacific branching coral, Pocillopora damicornis. We investigated the dependence of nitrogen isotope fractionation on species of DIN (nitrate or ammonium), concentration of DIN (range: 1-50 μM N), genetic diversity of algal symbionts (clade C or clade D) and light levels.

Water-soluble organic nitrogen in atmospheric fine particles (PM2.5) from northern California

NASA Astrophysics Data System (ADS)

Zhang, Qi; Anastasio, Cort; Jimenez-Cruz, Mike

2002-06-01

Recent studies have suggested that organic nitrogen (ON) is a ubiquitous and significant component of atmospheric dry and wet deposition, but very little is known about the concentrations and speciation of organic nitrogen in aerosol particles. In addition, while amino compounds also appear to be ubiquitous in atmospheric condensed phases, their contribution to organic nitrogen has not been previously quantified. To address these issues, we have characterized the water-soluble organic nitrogen and amino compounds in fine particles (PM2.5) collected in Davis, California, over a period of 1 year. Concentrations of water-soluble organic nitrogen (WSON) ranged from 3.1-57.8 nmol N m-3 air, peaking during winter and early spring, and typically accounted for ~20% of total nitrogen in Davis PM2.5. Assuming an average N-normalized molecular weight of 100 Da per N atom for WSON, particulate organic nitrogen had a median mass concentration of 1.6 μg m-3 air, and typically represented 18% of the total fine particle mass. The average mass of water-soluble ON in Davis PM2.5 was comparable to that of sulfate during the summer, but was significantly higher in winter. Total amino compounds (free plus combined forms) made up a significant portion of particulate organic nitrogen (median value equal to 23%), primarily due to the presence of combined amino compounds such as proteins and peptides. Total amino compounds had a median mass concentration of 290 ng m-3 air, and typically accounted for 3.3% of the total fine particle mass. These results indicate that organic nitrogen is a significant component of fine particles in northern California, and suggest that this group of compounds might play an important role in the ecological, radiative, and potential health effects of atmospheric fine particles in this region.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hug, Laura A.; Thomas, Brian C.; Sharon, Itai

Nitrogen, sulfur and carbon fluxes in the terrestrial subsurface are determined by the intersecting activities of microbial community members, yet the organisms responsible are largely unknown. Metagenomic methods can identify organisms and functions, but genome recovery is often precluded by data complexity. To address this limitation, we developed subsampling assembly methods to re-construct high-quality draft genomes from complex samples. Here, we applied these methods to evaluate the interlinked roles of the most abundant organisms in biogeochemical cycling in the aquifer sediment. Community proteomics confirmed these activities. The eight most abundant organisms belong to novel lineages, and two represent phyla withmore » no previously sequenced genome. Four organisms are predicted to fix carbon via the Calvin Benson Bassham, Wood Ljungdahl or 3-hydroxyproprionate/4-hydroxybutarate pathways. The profiled organisms are involved in the network of denitrification, dissimilatory nitrate reduction to ammonia, ammonia oxidation and sulfate reduction/oxidation, and require substrates supplied by other community members. An ammonium-oxidizing Thaumarchaeote is the most abundant community member, despite low ammonium concentrations in the groundwater. Finally, this organism likely benefits from two other relatively abundant organisms capable of producing ammonium from nitrate, which is abundant in the groundwater. Overall, dominant members of the microbial community are interconnected through exchange of geochemical resources.« less

NEMA, a functional-structural model of nitrogen economy within wheat culms after flowering. II. Evaluation and sensitivity analysis.

PubMed

Bertheloot, Jessica; Wu, Qiongli; Cournède, Paul-Henry; Andrieu, Bruno

2011-10-01

Simulating nitrogen economy in crop plants requires formalizing the interactions between soil nitrogen availability, root nitrogen acquisition, distribution between vegetative organs and remobilization towards grains. This study evaluates and analyses the functional-structural and mechanistic model of nitrogen economy, NEMA (Nitrogen Economy Model within plant Architecture), developed for winter wheat (Triticum aestivum) after flowering. NEMA was calibrated for field plants under three nitrogen fertilization treatments at flowering. Model behaviour was investigated and sensitivity to parameter values was analysed. Nitrogen content of all photosynthetic organs and in particular nitrogen vertical distribution along the stem and remobilization patterns in response to fertilization were simulated accurately by the model, from Rubisco turnover modulated by light intercepted by the organ and a mobile nitrogen pool. This pool proved to be a reliable indicator of plant nitrogen status, allowing efficient regulation of nitrogen acquisition by roots, remobilization from vegetative organs and accumulation in grains in response to nitrogen treatments. In our simulations, root capacity to import carbon, rather than carbon availability, limited nitrogen acquisition and ultimately nitrogen accumulation in grains, while Rubisco turnover intensity mostly affected dry matter accumulation in grains. NEMA enabled interpretation of several key patterns usually observed in field conditions and the identification of plausible processes limiting for grain yield, protein content and root nitrogen acquisition that could be targets for plant breeding; however, further understanding requires more mechanistic formalization of carbon metabolism. Its strong physiological basis and its realistic behaviour support its use to gain insights into nitrogen economy after flowering.

Soil Microbial Communities and Gas Dynamics Contribute to Arbuscular Mycorrhizal Nitrogen Uptake and Transfer to Plants

NASA Astrophysics Data System (ADS)

Hestrin, R.; Harrison, M. J.; Lehmann, J.

2016-12-01

Arbuscular mycorrhizal fungi (AMF) associate with most terrestrial plants and influence ecosystem ecology and biogeochemistry. There is evidence that AMF play a role in soil nitrogen cycling, in part by taking up nitrogen and transferring it to plants. However, many aspects of this process are poorly understood, including the factors that control fungal access to nitrogen stored in soil organic matter. In this study, we used stable isotopes and root exclusion to track nitrogen movement from organic matter into AMF and host plants. AMF significantly increased total plant biomass and nitrogen content, but both AMF and other soil microbes seemed to compete with plants for nitrogen. Surprisingly, gaseous nitrogen species also contributed significantly to plant nitrogen content under alkaline soil conditions. Our current experiments investigate whether free-living microbial communities that have evolved under a soil nitrogen gradient influence AMF access to soil organic nitrogen and subsequent nitrogen transfer to plants. This research links interactions between plants, mycorrhizal symbionts, and free-living microbes with terrestrial carbon and nitrogen dynamics.

Organization of biogeochemical nitrogen pathways with switch-like adjustment in fluctuating soil redox conditions

PubMed Central

Lamba, Sanjay; Bera, Soumen; Rashid, Mubasher; Medvinsky, Alexander B.; Acquisti, Claudia; Li, Bai-Lian

2017-01-01

Nitrogen is cycled throughout ecosystems by a suite of biogeochemical processes. The high complexity of the nitrogen cycle resides in an intricate interplay between reversible biochemical pathways alternatively and specifically activated in response to diverse environmental cues. Despite aggressive research, how the fundamental nitrogen biochemical processes are assembled and maintained in fluctuating soil redox conditions remains elusive. Here, we address this question using a kinetic modelling approach coupled with dynamical systems theory and microbial genomics. We show that alternative biochemical pathways play a key role in keeping nitrogen conversion and conservation properties invariant in fluctuating environments. Our results indicate that the biochemical network holds inherent adaptive capacity to stabilize ammonium and nitrate availability, and that the bistability in the formation of ammonium is linked to the transient upregulation of the amo-hao mediated nitrification pathway. The bistability is maintained by a pair of complementary subsystems acting as either source or sink type systems in response to soil redox fluctuations. It is further shown how elevated anthropogenic pressure has the potential to break down the stability of the system, altering substantially ammonium and nitrate availability in the soil, with dramatic effects on biodiversity. PMID:28280580

Adsorptive removal and separation of chemicals with metal-organic frameworks: Contribution of π-complexation.

PubMed

Khan, Nazmul Abedin; Jhung, Sung Hwa

2017-03-05

Efficient removal and separation of chemicals from the environment has become a vital issue from a biological and environmental point of view. Currently, adsorptive removal/separation is one of the most promising approaches for cleaning purposes. Selective adsorption/removal of various sulfur- and nitrogen-containing compounds, olefins, and π-electron-rich gases via π-complex formation between an adsorbent and adsorbate molecules is very competitive. Porous metal-organic framework (MOF) materials are very promising in the adsorption/separation of various liquids and gases owing to their distinct characteristics. This review summarizes the literature on the adsorptive removal/separation of various π-electron-rich compounds mainly from fuel and gases using MOF materials containing metal ions that are active for π-complexation. Details of the π-complexation, including mechanism, pros/cons, applications, and efficient ways to form the complex, are discussed systematically. For in-depth understanding, molecular orbital calculations regarding charge transfer between the π-complexing species are also explained in a separate section. From this review, readers will gain an understanding of π-complexation for adsorption and separation, especially with MOFs, to develop new insight for future research. Copyright © 2016 Elsevier B.V. All rights reserved.

NITROGEN DEPOSITION AND ORGANIC MATTER MANIPULATIONS AFFECT GROSS AND NET NITROGEN TRANSFORMATIONS IN TWO TEMPERATE FORESTS SOILS

EPA Science Inventory

Soil nitrogen transformations are intricately linked to carbon transformations. We utilized two existing organic matter manipulation sites in western Oregon, USA and Hungary to investigate these linkages. Our questions were: 1) Does the quantity and quality of organic matter af...

Laboratory Investigation of Mineralization of Refractory Nitrogen from Sewage Treatment Plants

NASA Astrophysics Data System (ADS)

Benoit, Gaboury; Wang, Peng

2017-12-01

Laboratory studies were conducted and modeled to evaluate whether refractory organic nitrogen in tertiary-treated wastewater effluent could become bioavailable by conversion to mineral forms. Multiday incubations of effluent collected from the Branford and New Haven, Connecticut, waste water treatment plants (WWTP) revealed low but steady conversion of organic nitrogen to nitrate (NO3 -). In Branford, the principal form of organic nitrogen was dissolved, and in New Haven it was particulate. Modeling suggested that in both the cases conversion to NO3 - from organic forms occurred at several per cent per day, and appeared to happen via the intermediary NH4 +. The results suggest that organic nitrogen may be an important source of bioavailable N, contributing to the problem of hypoxia in Long Island Sound and other estuaries.

Laboratory Investigation of Mineralization of Refractory Nitrogen from Sewage Treatment Plants.

PubMed

Benoit, Gaboury; Wang, Peng

2017-12-01

Laboratory studies were conducted and modeled to evaluate whether refractory organic nitrogen in tertiary-treated wastewater effluent could become bioavailable by conversion to mineral forms. Multiday incubations of effluent collected from the Branford and New Haven, Connecticut, waste water treatment plants (WWTP) revealed low but steady conversion of organic nitrogen to nitrate (NO 3 - ). In Branford, the principal form of organic nitrogen was dissolved, and in New Haven it was particulate. Modeling suggested that in both the cases conversion to NO 3 - from organic forms occurred at several per cent per day, and appeared to happen via the intermediary NH 4 + . The results suggest that organic nitrogen may be an important source of bioavailable N, contributing to the problem of hypoxia in Long Island Sound and other estuaries.

Input of easily available organic C and N stimulates microbial decomposition of soil organic matter in arctic permafrost soil

PubMed Central

Wild, Birgit; Schnecker, Jörg; Alves, Ricardo J. Eloy; Barsukov, Pavel; Bárta, Jiří; Čapek, Petr; Gentsch, Norman; Gittel, Antje; Guggenberger, Georg; Lashchinskiy, Nikolay; Mikutta, Robert; Rusalimova, Olga; Šantrůčková, Hana; Shibistova, Olga; Urich, Tim; Watzka, Margarete; Zrazhevskaya, Galina; Richter, Andreas

2014-01-01

Rising temperatures in the Arctic can affect soil organic matter (SOM) decomposition directly and indirectly, by increasing plant primary production and thus the allocation of plant-derived organic compounds into the soil. Such compounds, for example root exudates or decaying fine roots, are easily available for microorganisms, and can alter the decomposition of older SOM (“priming effect”). We here report on a SOM priming experiment in the active layer of a permafrost soil from the central Siberian Arctic, comparing responses of organic topsoil, mineral subsoil, and cryoturbated subsoil material (i.e., poorly decomposed topsoil material subducted into the subsoil by freeze–thaw processes) to additions of 13C-labeled glucose, cellulose, a mixture of amino acids, and protein (added at levels corresponding to approximately 1% of soil organic carbon). SOM decomposition in the topsoil was barely affected by higher availability of organic compounds, whereas SOM decomposition in both subsoil horizons responded strongly. In the mineral subsoil, SOM decomposition increased by a factor of two to three after any substrate addition (glucose, cellulose, amino acids, protein), suggesting that the microbial decomposer community was limited in energy to break down more complex components of SOM. In the cryoturbated horizon, SOM decomposition increased by a factor of two after addition of amino acids or protein, but was not significantly affected by glucose or cellulose, indicating nitrogen rather than energy limitation. Since the stimulation of SOM decomposition in cryoturbated material was not connected to microbial growth or to a change in microbial community composition, the additional nitrogen was likely invested in the production of extracellular enzymes required for SOM decomposition. Our findings provide a first mechanistic understanding of priming in permafrost soils and suggest that an increase in the availability of organic carbon or nitrogen, e.g., by increased plant productivity, can change the decomposition of SOM stored in deeper layers of permafrost soils, with possible repercussions on the global climate. PMID:25089062

Increased nitrogen availability counteracts climatic change feedback from increased temperature on boreal forest soil organic matter degradation

NASA Astrophysics Data System (ADS)

Erhagen, Bjorn; Nilsson, Mats; Oquist, Mats; Ilstedt, Ulrik; Sparrman, Tobias; Schleucher, Jurgen

2014-05-01

Over the last century, the greenhouse gas concentrations in the atmosphere have increased dramatically, greatly exceeding pre-industrial levels that had prevailed for the preceding 420 000 years. At the same time the annual anthropogenic contribution to the global terrestrial nitrogen cycle has increased and currently exceeds natural inputs. Both temperature and nitrogen levels have profound effects on the global carbon cycle including the rate of organic matter decomposition, which is the most important biogeochemical process that returns CO2 to the atmosphere. Here we show for the first time that increasing the availability of nitrogen not only directly affects the rate of organic matter decomposition but also significantly affects its temperature dependence. We incubated litter and soil organic matter from a long-term (40 years) nitrogen fertilization experiment in a boreal Scots pine (Pinus silvestris L.) forest at different temperatures and determined the temperature dependence of the decomposition of the sample's organic matter in each case. Nitrogen fertilization did not affect the temperature sensitivity (Q10) of the decomposition of fresh plant litter but strongly reduced that for humus soil organic matter. The Q10 response of the 0-3 cm soil layer decreased from 2.5±0.35 to an average of 1.9±0.21 over all nitrogen treatments, and from 2.2±0.19 to 1.6±0.16 in response to the most intense nitrogen fertilization treatment in the 4-7 cm soil layer. Long-term nitrogen additions also significantly affected the organic chemical composition (as determined by 13C CP-MAS NMR spectroscopy) of the soil organic matter. These changes in chemical composition contributed significantly (p<0.05) to the reduced Q10 response. These new insights into the relationship between nitrogen availability and the temperature sensitivity of organic matter decomposition will be important for understanding and predicting how increases in global temperature and rising anthropogenic nitrogen inputs will affect the global carbon cycle and the associated climatic feedback processes.

Nitrogen Cycling in the Mycorrhizosphere: Multipartite Interactions and Plant Nitrogen Uptake Vary with Fertilization Legacy

NASA Astrophysics Data System (ADS)

Hestrin, R.; Lehmann, J.

2017-12-01

Soil microbes play an important role in rhizosphere nutrient cycling and plant productivity. In this study, the contributions of soil microbes to organic matter mineralization and plant nitrogen uptake were investigated using incubation and microcosm experiments. Microbial inocula included arbuscular mycorrhizal fungi and microbial communities sampled across a long-term gradient of nitrogen fertilization. Stable isotopes, nanoSIMS imaging, and phospholipid fatty acid analysis were used to track carbon and nitrogen movement from organic matter into microbes, mycorrhizal fungi, and plants. Results show that multipartite relationships between plants and microbes increased plant growth and access to nitrogen from organic matter, and that nitrogen fertilization history had a lasting effect on microbial contributions to fungal and plant nitrogen uptake. This research links rhizosphere ecology and land management with terrestrial biogeochemistry.

The nature and function of microbial enzymes in subsurface marine sediments

NASA Astrophysics Data System (ADS)

Steen, A. D.; Schmidt, J.

2016-02-01

Isotopic and genomic evidence indicates that marine sediments contain populations of active heterotrophic microorganisms which appear to metabolize old, detrital, apparently recalcitrant organic matter. In surface communities, heterotrophs use extracellular enzymes to access complex organic matter. In subsurface sediments, in which microbial doubling times can be on the order of hundreds or thousands of years, it is not clear whether extracellular enzymes could remain stable and active long enough to constitute a 'profitable' stragtegy for accessing complex organic carbon. Here we present evidence that a wide range of extracellular enzyme are active in subsurface sediments from two different environments: the White Oak River, NC, and deep (up to 80 m) sediments of the Baltic Sea Basin recovered from IODP Expedition 347. In the White Oak River, enzymes from deeper sediments appear to be better-adapted to highly-degraded organic matter than enzymes from surface sediments. In the Baltic Sea, preliminary data suggest that enzymes related to nitrogen acquisition are preferentially expressed. By characterizing the extracellular enzymes present in marine sediments, we hope to achieve a better understanding of the mechanisms that control sedimentary organic matter remineralization and preservation.

Organo-mineral complexation alters carbon and nitrogen cycling in stream microbial assemblages

NASA Astrophysics Data System (ADS)

Hunter, William Ross; Wanek, Wolfgang; Prommer, Judith; Mooshammer, Maria; Battin, Tom

2014-05-01

Inland waters are of global biogeochemical importance receiving carbon inputs of ~ 4.8 Pg C y-1. Of this 12 % is buried, 18 % transported to the oceans, and 70 % supports aquatic secondary production. However, the mechanisms that determine the fate of organic matter (OM) in these systems are poorly defined. One important aspect is the formation of organo-mineral complexes in aquatic systems and their potential as a route for OM transport and burial vs. microbial utilization as organic carbon (C) and nitrogen (N) sources. Organo-mineral particles form by sorption of dissolved OM to freshly eroded mineral surfaces and may contribute to ecosystem-scale particulate OM fluxes. We tested the availability of mineral-sorbed OM as a C & N source for streamwater microbial assemblages and streambed biofilms. Organo-mineral particles were constructed in vitro by sorption of 13C:15N-labelled amino acids to hydrated kaolin particles, and microbial degradation of these particles compared with equivalent doses of 13C:15N-labelled free amino acids. Experiments were conducted in 120 ml mesocosms over 7 days using biofilms and streamwater sampled from the Oberer Seebach stream (Austria), tracing assimilation and mineralization of 13C and 15N labels from mineral-sorbed and dissolved amino acids. Here we present data on the effects of organo-mineral sorption upon amino acid mineralization and its C:N stoichiometry. Organo-mineral sorption had a significant effect upon microbial activity, restricting C and N mineralization by both the biofilm and streamwater treatments. Distinct differences in community response were observed, with both dissolved and mineral-stabilized amino acids playing an enhanced role in the metabolism of the streamwater microbial community. Mineral-sorption of amino acids differentially affected C & N mineralization and reduced the C:N ratio of the dissolved amino acid pool. The present study demonstrates that organo-mineral complexes restrict microbial degradation of OM and may, consequently, alter the carbon and nitrogen cycling dynamics within aquatic ecosystems.

Changes phosphorus associated to phosphatase activity because of application of carbon, nitrogen and manure

NASA Astrophysics Data System (ADS)

Paredes, Cecilia; Gianfreda, Liliana; Mora, María de la Luz

2015-04-01

The Chilean Andisols are of great importance in the economy of southern Chile supporting the bulk of agricultural production. The major characteristics of Chilean volcanic soils are the high adsorption capacity of P with a concomitant low P availability to plants. Studies preliminary using dairy cattle dung suggest that we can improve P availability using organic P sources within the soil because of microorganism. Phosphorous solubilization by microorganisms is a complex phenomenon, which depends on many factors such as nutritional, physiological and growth condition of the culture. The principal mechanism for mineral phosphate solubilization is the production of organic acids where the enzyme phosphatases play a major role in the mineralization of organic phosphorous in soil. The objective of this study was to evaluate changes in soil phosphorus fractions due to application the cattle dung, glucose, nitrogen (N) and phosphorus (P). In this experiment we incubated soil samples with 300 g of cattle dung, 30 mg kg-1 of N and P and 1000 mg glucose kg-1. The soil samples were moistened to field capacity and incubated in plastic bags to room temperature by different time. The changes in P forms in soil were monitored through the Hedley fractionation procedure and phosphatase activity. Our preliminary results indicated that the application of cattle dung, glucose nitrogen and phosphorus, caused the increased phosphatase activity until to 7 days and then apparently return to normal values. Interestingly, we observed a rise in the inorganic P fraction extracted by NaHCO3 in the same period. In summary, the increase biological activity by carbon and nitrogen increase P availability. Acknowledgements: The authors thank Fondecyt 1141247 Project.

Within-storm and Seasonal Differences in Particulate Organic Material Composition and Sources in White Clay Creek, USA

NASA Astrophysics Data System (ADS)

Karwan, D. L.; Aufdenkampe, A. K.; Aalto, R. E.; Newbold, J. D.; Pizzuto, J. E.

2011-12-01

The material exported from a watershed reflects its origin and the processes it undergoes during downhill and downstream transport. Due to its nature as a complex mixture of material, the composition of POM integrates the physical, biological, and chemical processes effecting watershed material. In this study, we integrate sediment fingerprint analyses common in geomorphological studies of mineral suspended particulate material (SPM) with biological and ecological characterizations of particulate organic carbon (POC). Through this combination, we produce quantifiable budgets of particulate organic carbon and mineral material, as well as integrate our calculations of carbon and mineral cycling in a complex, human-influenced watershed. More specifically, we quantify the composition and sources of POM in the third-order White Clay Creek Watershed, and examine the differences in composition and source with hydrologic variations produced by storms and seasonality. POM and watershed sources have been analyzed for particle size, mineral surface area, total mineral elemental composition, fallout radioisotope activity for common erosion tracers (7Be, 210Pb, 137Cs), and organic carbon and nitrogen content with stable isotope (13C, 15N) abundance. Results indicate a difference in POM source with season as well as within individual storms. Beryllium-7 activity, an indicator of landscape surface erosion, nearly triples within a single spring storm, from 389 mBq/g on the rising limb and 1190 mBq/g at the storm hydrograph peak. Fall storms have even lower 7Be concentrations, below 100 mBq/g. Furthermore, weight-percent of organic carbon nearly doubles from 4 - 5% during spring storms to over 8% during fall storms, with smaller variation occurring within individual storms. Despite changes in percent organic carbon, organic carbon to mineral surface area ratios and carbon to nitrogen molar ratios remain similar within storms and across seasons.

Use of collagen hydrolysate as a complex nitrogen source for the synthesis of penicillin by Penicillium chrysogenum.

PubMed

Leonhartsberger, S; Lafferty, R M; Korneti, L

1993-09-01

Optimal conditions for both biomass formation and penicillin synthesis by a strain of Penicillium chrysogenum were determined when using a collagen-derived nitrogen source. Preliminary investigations were carried out in shaken flask cultures employing a planned experimental program termed the Graeco-Latin square technique (Auden et al., 1967). It was initially determined that up to 30% of a conventional complex nitrogen source such as cottonseed meal could be replaced by the collagen-derived nitrogen source without decreasing the productivity with respect to the penicillin yield. In the pilot scale experiments using a 30 l stirred tank type of bioreactor, higher penicillin yields were obtained when 70% of the conventional complex nitrogen source in the form of cottonseed meal was replaced by the collagen hydrolysate. Furthermore, the maximum rate of penicillin synthesis continued for over a longer period when using collagen hydrolysate as a complex nitrogen source. Penicillin synthesis rates were determined using a linear regression.

Structural direction of hybrid organic-inorganic materials: Synthesis of vanadium oxyfluoride, copper vanadate, and copper molybdate solid state materials through solvuthermal and solution methods

NASA Astrophysics Data System (ADS)

Deburgomaster, Paul

The vast structural complexity of inorganic oxides with structure directing organocations, nitrogen containing ligands and organophosphonate ligands was explored. The hydrothermal reaction conditions utilized herein include the variables of temperature, pH, fill volume and stoichiometry. The systems studied included: (1) the complex materials rendered from reactions of organoamine cations on the structure of vanadium oxides, oxyfluorides and fluorides. As with other systems, the influence of the mineralizer HF was not limited to pH as fluorine incorporation was not uncommon. In specific cases this coincided with reduction of vanadium sites. (2) The copper-organonitrogen ligand/vanadium oxide/aromatic phosphonate system has been studied. The rigid aromatic di- and tri-phosphonate tethers have provided a series of materials which are structurally distinct from the previously investigated aliphatic series. The inclusion of copper-coordinated nitrogen bi- and tri-dentate ligands also provided structural diversity. Product composition was highly influenced by the HF/V ratio. A similar study was conducted with the ligand 1,4-carboxy-phenylphosphonic acid. (3) The preparation of a series of bimetallic organic-inorganic hybrid materials of the M(II)/VxOy/organonitrogen ligand class was further evidence of the utility of thermodynamically driven hydrothermal synthesis. (4) While decomposition of the spherical Keplerate molybdenum clusters is encountered under hydrothermal conditions, this highly soluble form of molybdate was investigated for the development of hybrid organic-inorganic room temperature solution synthesis.

Inoculation with a psychrotrophic-thermophilic complex microbial agent accelerates onset and promotes maturity of dairy manure-rice straw composting under cold climate conditions.

PubMed

Gou, Changlong; Wang, Yuqiong; Zhang, Xiqing; Lou, Yujie; Gao, Yunhang

2017-11-01

The objective was to determine the effects of psychrotrophic-thermophilic complex microbial agent (PTCMA) comprised of a psychrotrophic bacterium consortium (PBC) and a thermophilic cellulolytic fungi consortium (TCFC), on composting in a cold climate. Mixtures of dairy manure and rice straw were inoculated with PTCMA, PBC, TCFC and sterile water (control) and composted at an initial ambient temperatures of -2 to 5°C. In compost piles inoculated with PBC or PTCMA, temperatures reached the thermophilic phase (>55°C) faster (8-11d) than piles inoculated with TCFC or control. Furthermore, compost inoculated with TCFC or PTCMA had greater decreases in total organic carbon and carbon-to-nitrogen ratios, as well as significant increases in total nitrogen, degradation of cellulose and lignin and germination index than PBC inoculation or Control compost. Consequently, inoculation with both (i.e. PTCMA) accelerated the onset and promoted maturity of composting under cold-climate conditions. Copyright © 2017 Elsevier Ltd. All rights reserved.

NEMA, a functional-structural model of nitrogen economy within wheat culms after flowering. I. Model description.

PubMed

Bertheloot, Jessica; Cournède, Paul-Henry; Andrieu, Bruno

2011-10-01

Models simulating nitrogen use by plants are potentially efficient tools to optimize the use of fertilizers in agriculture. Most crop models assume that a target nitrogen concentration can be defined for plant tissues and formalize a demand for nitrogen, depending on the difference between the target and actual nitrogen concentrations. However, the teleonomic nature of the approach has been criticized. This paper proposes a mechanistic model of nitrogen economy, NEMA (Nitrogen Economy Model within plant Architecture), which links nitrogen fluxes to nitrogen concentration and physiological processes. A functional-structural approach is used: plant aerial parts are described in a botanically realistic way and physiological processes are expressed at the scale of each aerial organ or root compartment as a function of local conditions (light and resources). NEMA was developed for winter wheat (Triticum aestivum) after flowering. The model simulates the nitrogen (N) content of each photosynthetic organ as regulated by Rubisco turnover, which depends on intercepted light and a mobile N pool shared by all organs. This pool is enriched by N acquisition from the soil and N release from vegetative organs, and is depleted by grain uptake and protein synthesis in vegetative organs; NEMA accounts for the negative feedback from circulating N on N acquisition from the soil, which is supposed to follow the activities of nitrate transport systems. Organ N content and intercepted light determine dry matter production via photosynthesis, which is distributed between organs according to a demand-driven approach. NEMA integrates the main feedbacks known to regulate plant N economy. Other novel features are the simulation of N for all photosynthetic tissues and the use of an explicit description of the plant that allows how the local environment of tissues regulates their N content to be taken into account. We believe this represents an appropriate frame for modelling nitrogen in functional-structural plant models. A companion paper will present model evaluation and analysis.

Formation of amino acids and nucleic acid constituents from simulated primitive planetary atmospheres by irradiation with high-energy protons

NASA Astrophysics Data System (ADS)

Kobayashi, K.; Yamanashi, H.; Ohashi, A.; Kaneko, T.; Miyakawa, S.; Saito, T.

It is suggested that primitive Earth atmosphere was only slightly reduced, which w as composed of carbon dioxide, carbon monoxide, nitrogen and water. It has been shown that bioorganic compounds can be hardly formed by energies as UV light, heat and spark discharges. We therefore examined possible formation pat hways of bioorganic compounds in the primitive E arth. A mixt ure of carbon monoxide, nitrogen and water was irradiated with high-energy prot ons generated by a van de Graaff accelerator, whi c h simulated an action of cosm ic rays. Aqueous solution of the product was hydr olyzed, and then analyzed by chromatography and mass spectrometry. A wide variety of amino acids and uracil, one of the nucle ic acid bases, wer e identified. Ribose, the RNA sugar, has not been identified, but formation of reducing polyols was suggested. A mino acids and uracil were also formed from a mixture of carbo n dioxide, carbon monoxide, nitrogen and water, and their yields correlated to the ratio of carbon monoxide and nitrogen in the mixture. Since a certain percentage of carbon monoxide could be expected to be in it [1], cosmic radiation can be regarded as an effective energ so urce for prebiotic formation of life's building blocks in they primitive Earth [2]. In the conventional scenario of chemical evolution, amino acids were formed in t he primitive ocean from such intermediates as HCN an d HCHO formed in t he atmosphere. T his scenario seem s not to be possible due to the following reasons: (1) The irradiation products were quit e complex organic com pound s whose molecular weights were ca. 1000, and they gave amino acids after hydrolysis. (2) Energy yields of amino ac ids in the hydrolysates were comparable to those of HCN and HCHO in the irradiation pro duct s. (3) Irradiation products from a mixture of carbon monoxide and nitrogen without water als o gave amino acids aft er hydrolysis. T hes e observations strongly sugge s t e d that complex precursors of bioor ganic com poun ds could be formed directly in the atmosphere. A new scenario of chemical evolution via complex organics toward the origin of life will be prop o s e d. [1] J. Kasting, Origins Life Evol. Biosph ere, 20, 199 (1990). [2] K. Kobay ashi , et al., Origins Life Evol. Biosphere, 28, 155 (1998). * Present address: Rensselaer Polytechnic Ins titut e.

Nitrogen Metabolite Repression of Metabolism and Virulence in the Human Fungal Pathogen Cryptococcus neoformans

PubMed Central

Lee, I. Russel; Chow, Eve W. L.; Morrow, Carl A.; Djordjevic, Julianne T.; Fraser, James A.

2011-01-01

Proper regulation of metabolism is essential to maximizing fitness of organisms in their chosen environmental niche. Nitrogen metabolite repression is an example of a regulatory mechanism in fungi that enables preferential utilization of easily assimilated nitrogen sources, such as ammonium, to conserve resources. Here we provide genetic, transcriptional, and phenotypic evidence of nitrogen metabolite repression in the human pathogen Cryptococcus neoformans. In addition to loss of transcriptional activation of catabolic enzyme-encoding genes of the uric acid and proline assimilation pathways in the presence of ammonium, nitrogen metabolite repression also regulates the production of the virulence determinants capsule and melanin. Since GATA transcription factors are known to play a key role in nitrogen metabolite repression, bioinformatic analyses of the C. neoformans genome were undertaken and seven predicted GATA-type genes were identified. A screen of these deletion mutants revealed GAT1, encoding the only global transcription factor essential for utilization of a wide range of nitrogen sources, including uric acid, urea, and creatinine—three predominant nitrogen constituents found in the C. neoformans ecological niche. In addition to its evolutionarily conserved role in mediating nitrogen metabolite repression and controlling the expression of catabolic enzyme and permease-encoding genes, Gat1 also negatively regulates virulence traits, including infectious basidiospore production, melanin formation, and growth at high body temperature (39°–40°). Conversely, Gat1 positively regulates capsule production. A murine inhalation model of cryptococcosis revealed that the gat1Δ mutant is slightly more virulent than wild type, indicating that Gat1 plays a complex regulatory role during infection. PMID:21441208

Organic nitrogen in PM2.5 aerosol at a forest site in the Southeast US

EPA Science Inventory

There is growing evidence that organo-nitrogen compounds may constitute a significant fraction of the aerosol nitrogen (N) budget. In this study, the concentration of organic nitrogen (ON) and major inorganic ions in PM2.5 aerosol were measured at the Duke Forest Research Facilit...

Water quality in the Sugar Creek basin, Bloomington and Normal, Illinois

USGS Publications Warehouse

Prugh, Byron J.

1978-01-01

Urban runoff and overflows from combined sewers affect water quantity and quality in Sugar Creek within the twin cities of Bloomington and Normal, Illinois. Water-quality data from five primary and eight secondary locations showed three basic types of responses to climatic and hydrologic stresses. Stream temperatures and concentrations of dissolved oxygen, ammonia nitrogen, total phosphorus, biochemical oxygen demand, and fecal bacteria showed seasonal variations. Specific conductivity, pH, chloride, and suspended solids concentrations varied more closely with stream discharges. Total organic carbon, total nitrogen, total phosphorus, biochemical oxygen demand, and fecal coliform and fecal streptococcal bacteria concentrations exhibited variations indicative of intial flushing action during storm runoff. Selected analyses for herbicides, insecticides, and other complex organic compounds in solution and in bed material showed that these constituents were coming from sources other than the municipal sanitary treatment plant effluent. Analyses for 10 common metals: arsenic, cadmium, chromium, copper, iron, lead, manganese, mercury, nickel, and zinc showed changes in concentrations below the municipal sanitary plant outfall. (Woodard-USGS)

Effects of mussel shell addition on the chemical and biological properties of a Cambisol.

PubMed

Paz-Ferreiro, J; Baez-Bernal, D; Castro Insúa, J; García Pomar, M I

2012-03-01

The use of a by-product of the fisheries industry (mussel shell) combined with cattle slurry was evaluated as soil amendment, with special attention to the biological component of soil. A wide number of properties related to soil quality were measured: microbial biomass, soil respiration, net N mineralization, dissolved organic carbon, dissolved organic nitrogen, dissolved inorganic nitrogen, dehydrogenase, β-glucosidase, urease and phosphomonoesterase activities. The amendments showed an enhancement of soil biological activity and a decrease of aluminium held in the cation exchange complex. No adverse effects were observed on soil properties. Given that mussel shells are produced in coastal areas as a by-product and have to be managed as a waste and the fertility constraints in the local soils due to their low pH, our research suggest that there is an opportunity for disposing a residue into the soil and improving soil fertility. Copyright © 2011 Elsevier Ltd. All rights reserved.

Aerosol from Organic Nitrogen in the Southeast United States

EPA Science Inventory

Biogenic volatile organic compounds (BVOCs) contribute significantly to organic aerosol in the southeastern United States. During the Southern Oxidant and Aerosol Study (SOAS), a portion of ambient organic aerosol was attributed to isoprene oxidation and organic nitrogen from BVO...

Responses of surface ozone air quality to anthropogenic nitrogen deposition in the Northern Hemisphere

NASA Astrophysics Data System (ADS)

Zhao, Yuanhong; Zhang, Lin; Tai, Amos P. K.; Chen, Youfan; Pan, Yuepeng

2017-08-01

Human activities have substantially increased atmospheric deposition of reactive nitrogen to the Earth's surface, inducing unintentional effects on ecosystems with complex environmental and climate consequences. One consequence remaining unexplored is how surface air quality might respond to the enhanced nitrogen deposition through surface-atmosphere exchange. Here we combine a chemical transport model (GEOS-Chem) and a global land model (Community Land Model, CLM) to address this issue with a focus on ozone pollution in the Northern Hemisphere. We consider three processes that are important for surface ozone and can be perturbed by the addition of atmospheric deposited nitrogen - namely, emissions of biogenic volatile organic compounds (VOCs), ozone dry deposition, and soil nitrogen oxide (NOx) emissions. We find that present-day anthropogenic nitrogen deposition (65 Tg N a-1 to the land), through enhancing plant growth (represented as increases in vegetation leaf area index, LAI, in the model), could increase surface ozone from increased biogenic VOC emissions (e.g., a 6.6 Tg increase in isoprene emission), but it could also decrease ozone due to higher ozone dry deposition velocities (up to 0.02-0.04 cm s-1 increases). Meanwhile, deposited anthropogenic nitrogen to soil enhances soil NOx emissions. The overall effect on summer mean surface ozone concentrations shows general increases over the globe (up to 1.5-2.3 ppbv over the western US and South Asia), except for some regions with high anthropogenic NOx emissions (0.5-1.0 ppbv decreases over the eastern US, western Europe, and North China). We compare the surface ozone changes with those driven by the past 20-year climate and historical land use changes. We find that the impacts from anthropogenic nitrogen deposition can be comparable to the climate- and land-use-driven surface ozone changes at regional scales and partly offset the surface ozone reductions due to land use changes reported in previous studies. Our study emphasizes the complexity of biosphere-atmosphere interactions, which can have important implications for future air quality prediction.

Organic Matter Loading Modifies the Microbial Community Responsible for Nitrogen Loss in Estuarine Sediments.

PubMed

Babbin, Andrew R; Jayakumar, Amal; Ward, Bess B

2016-04-01

Coastal marine sediments, as locations of substantial fixed nitrogen loss, are very important to the nitrogen budget and to the primary productivity of the oceans. Coastal sediment systems are also highly dynamic and subject to periodic natural and anthropogenic organic substrate additions. The response to organic matter by the microbial community involved in nitrogen loss processes was evaluated using mesocosms of Chesapeake Bay sediments. Over the course of a 50-day incubation, rates of anammox and denitrification were measured weekly using (15)N tracer incubations, and samples were collected for genetic analysis. Rates of both nitrogen loss processes and gene abundances associated with them corresponded loosely, probably because heterogeneities in sediments obscured a clear relationship. The rates of denitrification were stimulated more, and the fraction of nitrogen loss attributed to anammox slightly reduced, by the higher organic matter addition. Furthermore, the large organic matter pulse drove a significant and rapid shift in the denitrifier community composition as determined using a nirS microarray, indicating that the diversity of these organisms plays an essential role in responding to anthropogenic inputs. We also suggest that the proportion of nitrogen loss due to anammox in these coastal estuarine sediments may be underestimated due to temporal dynamics as well as from methodological artifacts related to conventional sediment slurry incubation approaches.

A porphyrin complex of Gold(I): (Phosphine)gold(I) azides as cation precursors

PubMed Central

Partyka, David V.; Robilotto, Thomas J.; Zeller, Matthias; Hunter, Allen D.; Gray, Thomas G.

2008-01-01

A silver- and Brönsted acid-free protocol for generating the (tricyclohexylphosphine)gold(I) cation from the corresponding azide complexes is disclosed. The gold(I) cations so liberated are trapped by complexation with octaethylporphyrin. The first structurally authenticated gold(I) porphyrin complex crystallizes with formula C72H112Au2F12N4P2Sb2, space group C2/c, a = 21.388 (4), b = 19.679 (4), c = 19.231 (3) Å; β = 111.030 (3)°. Solution spectroscopic studies indicate that the di-gold complex fragments on dissolution in organic solvents. Approximate density-functional theory calculations find an electrostatic origin for the binding of two gold(I) centers to the unprotonated nitrogen atoms, despite greater orbital density on the porphyrin meso carbons. PMID:18780788

Saturn's satellites: Potential for organic chemistry

NASA Astrophysics Data System (ADS)

Delitsky, M. L.; Lane, A. L.; Henry-Riyad, H.; Tidwell, T. T.

2003-05-01

The surfaces of the Saturnian satellites are subjected to irradiation from solar wind ions, photons, and magnetospheric ions and electrons. This bombardment will transform the chemical nature of the surfaces. At present, only water ice has been detected on their surfaces. Further studies by the Cassini spacecraft may reveal other molecules. If CO2 ice is found there, a whole panoply of new species may be detected. As nitrogen ions in the magnetosphere are thought to be an important species bombarding the satellites, Delitsky and Lane (2002) outlined the nitrogen oxides chemistry that may result from implantation of N+ into the water ice surfaces. Sittler et al (2002) showed that N+ ions originating from Titan will be enriched in the magnetospheric ion population as they move inwards towards Saturn, making the nitrogen oxides chemistry more likely. If CO2 is present, a complicated C-H-N-O chemistry may result from deposition of the N+ into a H2O/CO2 mixed ice, including nitriles, isocyanates, polymers, and amino acids. The combination of H2O/CO2 upon irradiation may also yield a complex mixture of hydrocarbons, esters, alcohols, organic acids and ketones. Possible chemical pathways and computations of their energetics will be presented. -Ref:- 1. Delitsky and Lane, Saturn's inner satellites: Ice chemistry and magnetosphere effects, JGR (Planets), Nov 2002, 3-1;; 2. Sittler et al., Energetic nitrogen ions within the inner magnetosphere of Saturn, Fall AGU meeting, Dec 2002, abstracts, pg F858, P21B-0379

40 CFR 62.14103 - Emission limits for municipal waste combustor metals, acid gases, organics, and nitrogen oxides.

Code of Federal Regulations, 2010 CFR

2010-07-01

... combustor metals, acid gases, organics, and nitrogen oxides. 62.14103 Section 62.14103 Protection of... combustor metals, acid gases, organics, and nitrogen oxides. (a) The emission limits for municipal waste combustor metals are specified in paragraphs (a)(1) through (a)(3) of this section. (1) The owner or...

Coupled cycling of dissolved organic nitrogen and carbon in a forest stream

Treesearch

E.N. Jack Brookshire; H. Maurice Valett; Steven A. Thomas; Jackson R. Webster

2005-01-01

Dissolved organic nitrogen (DON) is an abundant but poorly understood pool of N in many ecosystems. We assessed DON cycling in a N-limited headwater forest stream via whole-ecosystem additions of dissolved inorganic nitrogen (DIN) and labile dissolved organic matter (DOM), hydrologic transport and biogeochemical modeling, and laboratory experiments with native...

Changes in Soil Organic Carbon and Nitrogen as a Result of Cultivation

DOE Data Explorer

Post, Wilfred M [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Mann, L. K. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

2005-01-01

We assembed and analyzed a data base of soil organic carbon and nitrogen information from over 1100 profiles in order to explore factors related to the changes in storage of soil organic matter resulting from land conversion. The relationship between cultivated and uncultivated organic carbon and nitrogen storage in soils can be described by regression lines with uncultivated storage on the abscissa, and cultivated storage on the ordinate. The slope of the regression lines is less than 1 indicating that the amount of carbon or nitrogen lost is an increasing fraction of the intial amount stored in the soil. Average carbon loss for soils with high initial carbon is 23% for 1-meter depth. Average nitrogen loss for the same depth is 6%. In addition, for soils with very low uncultivated carbon or nitrogen storage, cultivation results in increases in storage. In soils with the same uncultivated carbon contents, profiles with higher C:N ratios lost more carbon than those with low C:N ratios, suggesting that decomposition of organic matter may, in general, be more limited by microbial ability to break carbon bonds than by nitrogen deficiency.

Searching for Bio-Precursors and Complex Organic Molecules in Space using the GBT

NASA Technical Reports Server (NTRS)

Cordiner, M.; Charnley, S.; Kisiel, Z.

2012-01-01

Using the latest microwave receiver technology, large organic molecules with abundances as low as approx. 10(exp -11) times that of molecular hydrogen are detectable in cold interstellar clouds via their rotational emission line spectra. We report new observations to search for complex molecules, including molecules of possible pre-biotic importance, using the newly-commissioned Kband focal plane array (KFPA) of the NRAO Robert C. Byrd Green Bank Telescope. Spectra are presented of the dense molecular cloud TMC-1, showing strict upper limits on the level of emission from nitrogen-bearing rings pyrimidine, quinoline and iso-quinoline, carbon-chain oxides C60, C70, HC60 and HC70, and the carbon-chain anion C4H-. The typical RMS brightness temperature noise levels we achieved are approx. 1 mK at around 20 GHz.

Is it really organic?--multi-isotopic analysis as a tool to discriminate between organic and conventional plants.

PubMed

Laursen, K H; Mihailova, A; Kelly, S D; Epov, V N; Bérail, S; Schjoerring, J K; Donard, O F X; Larsen, E H; Pedentchouk, N; Marca-Bell, A D; Halekoh, U; Olesen, J E; Husted, S

2013-12-01

Novel procedures for analytical authentication of organic plant products are urgently needed. Here we present the first study encompassing stable isotopes of hydrogen, carbon, nitrogen, oxygen, magnesium and sulphur as well as compound-specific nitrogen and oxygen isotope analysis of nitrate for discrimination of organically and conventionally grown plants. The study was based on wheat, barley, faba bean and potato produced in rigorously controlled long-term field trials comprising 144 experimental plots. Nitrogen isotope analysis revealed the use of animal manure, but was unable to discriminate between plants that were fertilised with synthetic nitrogen fertilisers or green manures from atmospheric nitrogen fixing legumes. This limitation was bypassed using oxygen isotope analysis of nitrate in potato tubers, while hydrogen isotope analysis allowed complete discrimination of organic and conventional wheat and barley grains. It is concluded, that multi-isotopic analysis has the potential to disclose fraudulent substitutions of organic with conventionally cultivated plants. Copyright © 2013 Elsevier Ltd. All rights reserved.

Analysis of North Atlantic Aircraft Data on Oxygenated Intermediate Species Using an Adapted Regional Chemistry-Transport Model

NASA Technical Reports Server (NTRS)

Chatfield, Robert; Mathur, Rohit; Alapaty, Kiran; Hanna, Adel; Binkowski, Frank; Guan, Hong; Esswein, Robert

2004-01-01

Our study is on the interaction of nitrogen oxides with organics as they are exported from their complex sources in Eastern North America. Both urban and specific industrial emissions contribute the nitrogen of the C-H-O-N compounds that affect the global atmosphere, helping determine both ozone and the self-cleaning radical chemistry of the troposphere mediated by the OH radical. Different industrial sources, urban, and natural emissions contribute the organic C. Peroxyacetyl nitrate, CH3C(double bonds O)OONO2 is the most interesting compound for which we can measure the outflow to the full depth of the Atlantic troposphere. As we adapt the 3-d chemical model to describe outflow for specific periods with sufficient accuracy, we are analyzing some valuable information in the NARE-97 complete airborne dataset. (NARE: North Atlantic Regional Experiment). Ames researchers find that there are substantial puzzles in the ratios of PAN/NO2. Peroxy acetyl nitrate provides one of the major long-distance export pathways for active nitrogen from Eastern North America. It should be closely linked with NO, (defined as the sum NO + NO2) by simple thermal association and decomposition reactions, at least when the ambient temperature is substantially above 5 C.

Bacterial quorum sensing and nitrogen cycling in rhizosphere soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeAngelis, K.M.; Lindow, S.E.; Firestone, M.K.

2008-10-01

Plant photosynthate fuels carbon-limited microbial growth and activity, resulting in increased rhizosphere nitrogen (N)-mineralization. Most soil organic N is macromolecular (chitin, protein, nucleotides); enzymatic depolymerization is likely rate-limiting for plant N accumulation. Analyzing Avena (wild oat) planted in microcosms containing sieved field soil, we observed increased rhizosphere chitinase and protease specific activities, bacterial cell densities, and dissolved organic nitrogen (DON) compared to bulk soil. Low-molecular weight DON (<3000 Da) was undetectable in bulk soil but comprised 15% of rhizosphere DON. Extracellular enzyme production in many bacteria requires quorum sensing (QS), cell-density dependent group behavior. Because proteobacteria are considered major rhizospheremore » colonizers, we assayed the proteobacterial QS signals acyl-homoserine lactones (AHLs), which were significantly increased in the rhizosphere. To investigate the linkage between soil signaling and N cycling, we characterized 533 bacterial isolates from Avena rhizosphere: 24% had chitinase or protease activity and AHL production; disruption of QS in 7 of 8 eight isolates disrupted enzyme activity. Many {alpha}-Proteobacteria were newly found with QS-controlled extracellular enzyme activity. Enhanced specific activities of N-cycling enzymes accompanied by bacterial density-dependent behaviors in rhizosphere soil gives rise to the hypothesis that QS could be a control point in the complex process of rhizosphere N-mineralization.« less

General Solvent-dependent Strategy toward Enhanced Oxygen Reduction Reaction in Graphene/Metal Oxide Nanohybrids: Effects of Nitrogen-containing Solvent

NASA Astrophysics Data System (ADS)

Kao, Wei-Yao; Chen, Wei-Quan; Chiu, Yu-Hsiang; Ho, Yu-Hsuan; Chen, Chun-Hu

2016-11-01

A general solvent-dependent protocol directly influencing the oxygen reduction reaction (ORR) in metal oxide/graphene nanohybrids has been demonstrated. We conducted the two-step synthesis of cobalt oxide/N-doped graphene nanohybrids (CNG) with solvents of water, ethanol, and dimethylformamide (DMF), representing tree typical categories of aqueous, polar organic, and organic N-containing solvents commonly adopted for graphene nanocomposites preparation. The superior ORR performance of the DMF-hybrids can be attributed to the high nitrogen-doping, aggregation-free hybridization, and unique graphene porous structures. As DMF is the more effective N-source, the spectroscopic results support a catalytic nitrogenation potentially mediated by cobalt-DMF coordination complexes. The wide-distribution of porosity (covering micro-, meso-, to macro-pore) and micron-void assembly of graphene may further enhance the diffusion kinetics for ORR. As the results, CNG by DMF-synthesis exhibits the high ORR activities close to Pt/C (i.e. only 8 mV difference of half-wave potential with electron transfer number of 3.96) with the better durability in the alkaline condition. Additional graphene hybrids comprised of iron and manganese oxides also show the superior ORR activities by DMF-synthesis, confirming the general solvent-dependent protocol to achieve enhanced ORR activities.

General Solvent-dependent Strategy toward Enhanced Oxygen Reduction Reaction in Graphene/Metal Oxide Nanohybrids: Effects of Nitrogen-containing Solvent

PubMed Central

Kao, Wei-Yao; Chen, Wei-Quan; Chiu, Yu-Hsiang; Ho, Yu-Hsuan; Chen, Chun-Hu

2016-01-01

A general solvent-dependent protocol directly influencing the oxygen reduction reaction (ORR) in metal oxide/graphene nanohybrids has been demonstrated. We conducted the two-step synthesis of cobalt oxide/N-doped graphene nanohybrids (CNG) with solvents of water, ethanol, and dimethylformamide (DMF), representing tree typical categories of aqueous, polar organic, and organic N-containing solvents commonly adopted for graphene nanocomposites preparation. The superior ORR performance of the DMF-hybrids can be attributed to the high nitrogen-doping, aggregation-free hybridization, and unique graphene porous structures. As DMF is the more effective N-source, the spectroscopic results support a catalytic nitrogenation potentially mediated by cobalt-DMF coordination complexes. The wide-distribution of porosity (covering micro-, meso-, to macro-pore) and micron-void assembly of graphene may further enhance the diffusion kinetics for ORR. As the results, CNG by DMF-synthesis exhibits the high ORR activities close to Pt/C (i.e. only 8 mV difference of half-wave potential with electron transfer number of 3.96) with the better durability in the alkaline condition. Additional graphene hybrids comprised of iron and manganese oxides also show the superior ORR activities by DMF-synthesis, confirming the general solvent-dependent protocol to achieve enhanced ORR activities. PMID:27853187

Organic Nitrogen-Driven Stimulation of Arbuscular Mycorrhizal Fungal Hyphae Correlates with Abundance of Ammonia Oxidizers

PubMed Central

Bukovská, Petra; Gryndler, Milan; Gryndlerová, Hana; Püschel, David; Jansa, Jan

2016-01-01

Large fraction of mineral nutrients in natural soil environments is recycled from complex and heterogeneously distributed organic sources. These sources are explored by both roots and associated mycorrhizal fungi. However, the mechanisms behind the responses of arbuscular mycorrhizal (AM) hyphal networks to soil organic patches of different qualities remain little understood. Therefore, we conducted a multiple-choice experiment examining hyphal responses to different soil patches within the root-free zone by two AM fungal species (Rhizophagus irregularis and Claroideoglomus claroideum) associated with Medicago truncatula, a legume forming nitrogen-fixing root nodules. Hyphal colonization of the patches was assessed microscopically and by quantitative real-time PCR (qPCR) using AM taxon-specific markers, and the prokaryotic and fungal communities in the patches (pooled per organic amendment treatment) were profiled by 454-amplicon sequencing. Specific qPCR markers were then designed and used to quantify the abundance of prokaryotic taxa showing the strongest correlation with the pattern of AM hyphal proliferation in the organic patches as per the 454-sequencing. The hyphal density of both AM fungi increased due to nitrogen (N)-containing organic amendments (i.e., chitin, DNA, albumin, and clover biomass), while no responses as compared to the non-amended soil patch were recorded for cellulose, phytate, or inorganic phosphate amendments. Abundances of several prokaryotes, including Nitrosospira sp. (an ammonium oxidizer) and an unknown prokaryote with affiliation to Acanthamoeba endosymbiont, which were frequently recorded in the 454-sequencing profiles, correlated positively with the hyphal responses of R. irregularis to the soil amendments. Strong correlation between abundance of these two prokaryotes and the hyphal responses to organic soil amendments by both AM fungi was then confirmed by qPCR analyses using all individual replicate patch samples. Further research is warranted to ascertain the causality of these correlations and particularly which direct roles (if any) do these prokaryotes play in the observed AM hyphal responses to organic N amendment, organic N utilization by the AM fungus and its (N-unlimited) host plant. Further, possible trophic dependencies between the different players in the AM hyphosphere needs to be elucidated upon decomposing the organic N sources. PMID:27242732

Organic Nitrogen-Driven Stimulation of Arbuscular Mycorrhizal Fungal Hyphae Correlates with Abundance of Ammonia Oxidizers.

PubMed

Bukovská, Petra; Gryndler, Milan; Gryndlerová, Hana; Püschel, David; Jansa, Jan

2016-01-01

Large fraction of mineral nutrients in natural soil environments is recycled from complex and heterogeneously distributed organic sources. These sources are explored by both roots and associated mycorrhizal fungi. However, the mechanisms behind the responses of arbuscular mycorrhizal (AM) hyphal networks to soil organic patches of different qualities remain little understood. Therefore, we conducted a multiple-choice experiment examining hyphal responses to different soil patches within the root-free zone by two AM fungal species (Rhizophagus irregularis and Claroideoglomus claroideum) associated with Medicago truncatula, a legume forming nitrogen-fixing root nodules. Hyphal colonization of the patches was assessed microscopically and by quantitative real-time PCR (qPCR) using AM taxon-specific markers, and the prokaryotic and fungal communities in the patches (pooled per organic amendment treatment) were profiled by 454-amplicon sequencing. Specific qPCR markers were then designed and used to quantify the abundance of prokaryotic taxa showing the strongest correlation with the pattern of AM hyphal proliferation in the organic patches as per the 454-sequencing. The hyphal density of both AM fungi increased due to nitrogen (N)-containing organic amendments (i.e., chitin, DNA, albumin, and clover biomass), while no responses as compared to the non-amended soil patch were recorded for cellulose, phytate, or inorganic phosphate amendments. Abundances of several prokaryotes, including Nitrosospira sp. (an ammonium oxidizer) and an unknown prokaryote with affiliation to Acanthamoeba endosymbiont, which were frequently recorded in the 454-sequencing profiles, correlated positively with the hyphal responses of R. irregularis to the soil amendments. Strong correlation between abundance of these two prokaryotes and the hyphal responses to organic soil amendments by both AM fungi was then confirmed by qPCR analyses using all individual replicate patch samples. Further research is warranted to ascertain the causality of these correlations and particularly which direct roles (if any) do these prokaryotes play in the observed AM hyphal responses to organic N amendment, organic N utilization by the AM fungus and its (N-unlimited) host plant. Further, possible trophic dependencies between the different players in the AM hyphosphere needs to be elucidated upon decomposing the organic N sources.

[Effects of nitrogen addition and elevated CO2 concentration on soil dissolved organic carbon and nitrogen in rhizosphere and non-rhizosphere of Bothriochloa ischaemum].

PubMed

Xiao, Lie; Liu, Guo Bin; Li, Peng; Xue, Sha

2017-01-01

A pot experiment was conducted to study soil dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) in the rhizosphere and non-rhizosphere of Bothriochloa ischaemum in loess hilly-gully region under the different treatments of CO 2 concentrations (400 and 800 μmol·mol -1 ) and nitrogen addition (0, 2.5, 5.0 g N·m -2 ·a -1 ). The results showed that eleva-ted CO 2 treatments had no significant effect on the contents of DOC, dissolved total nitrogen (DTN), DON, dissolved ammonium nitrogen (NH 4 + -N) and dissolved nitrate nitrogen (NO 3 - -N) in the soil of rhizosphere and non-rhizosphere of B. ischaemum. The contents of DTN, DON, and NO 3 - -N in the rhizosphere soil were significantly increased with the nitrogen application and the similar results of DTN and NO 3 - -N also were observed in the non-rhizosphere of B. ischaemum. Nitrogen application significantly decreased DOC/DON in the rhizosphere of B. ischaemum. The contents of DTN, NO 3 - -N and DON in the soil of rhizosphere were significantly lower than that in the non-rhizosphere soil, and DOC/DON was significantly higher in the rhizosphere soil than that in the non-rhizosphere soil. It indicated that short-term elevated CO 2 concentration had no significant influence on the contents of soil dissolved organic carbon and nitrogen. Simulated nitrogen deposition, to some extent, increased the content of soil dissolved nitrogen, but it was still insufficient to meet the demand of dissolved nitrogen for plant growing.

Sequestration of organic nitrogen in a paddy soil chronosequence as assessed by amino sugars molecular markers

NASA Astrophysics Data System (ADS)

Roth, Philipp; Lehndorff, E.; Cao, Z.; Amelung, W.

2010-05-01

Available nitrogen is a limiting factor in paddy rice systems due to ammonia volatilization, denitrification and stabilization in organic complexes. Soil organic nitrogen (SON) might therefore constitute a critical component of the nitrogen cycle in rice systems. The objective of this study was to elucidate the role of microorganisms for the sequestration of paddy N in organic forms. For this purpose we analyzed amino sugars as markers for the residues of bacteria and fungi in a chronosequence of soils that were used for paddy rice production for a period of 0 to 2000 years in the Hangzhou bay area in Southeast China. Within the soil profile, amino sugar concentrations were generally highest in the puddled Ap horizon and decreased with increasing depth along with organic carbon concentrations regardless of the time of rice cultivation. Nevertheless, a sharp increase of total amino sugar concentration from 0.1 g kg-1 to 0.3 g kg-1 was observed in the Ah horizon when comparing tidal wetland to salt marsh that had been impoldered 30 years ago, indicating an increasing importance of microbial residues in SON stabilization following the conversion of the semiaquatic marsh to a terrestrial system. With increased time of paddy rice cropping, amino sugar concentrations continued to increase up to a maximum of 2.1 g kg-1 after 300 years of paddy cultivation but declined again to 1 g kg-1 in soils with 700-2000 years history of cultivation despite increasing organic matter accumulation. Changes in the composition of the amino sugars were also most pronounced at initial stages of paddy rice management. The proportions of glucosamine (abundant in fungal chitin) decreased during the first 50 years of cultivation relative to mainly galactosamine (abundant in bacterial gums) and muramic acid (abundant in bacterial peptidoglycan), that remained at constantly low levels. At later stages of paddy rice cultivation, the ratios of glucosamine to galactosamine and to muramic acid re-increased. We conclude that microorganisms significantly contribute to the sequestration of paddy N in organic forms during the first 300 years of cropping, within an increasing contribution of bacteria as cropping time proceeds. At even longer periods of paddy rice cultivation, there appears to be a backshift to lower concentrations of microbial residues with higher proportions of fungal N remaining.

Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed.

PubMed

Bouchet, Anne-Sophie; Laperche, Anne; Bissuel-Belaygue, Christine; Baron, Cécile; Morice, Jérôme; Rousseau-Gueutin, Mathieu; Dheu, Jean-Eric; George, Pierre; Pinochet, Xavier; Foubert, Thomas; Maes, Olivier; Dugué, Damien; Guinot, Florent; Nesi, Nathalie

2016-09-15

Nitrogen use efficiency is an important breeding trait that can be modified to improve the sustainability of many crop species used in agriculture. Rapeseed is a major oil crop with low nitrogen use efficiency, making its production highly dependent on nitrogen input. This complex trait is suspected to be sensitive to genotype × environment interactions, especially genotype × nitrogen interactions. Therefore, phenotyping diverse rapeseed populations under a dense network of trials is a powerful approach to study nitrogen use efficiency in this crop. The present study aimed to determine the quantitative trait loci (QTL) associated with yield in winter oilseed rape and to assess the stability of these regions under contrasting nitrogen conditions for the purpose of increasing nitrogen use efficiency. Genome-wide association studies and linkage analyses were performed on two diversity sets and two doubled-haploid populations. These populations were densely genotyped, and yield-related traits were scored in a multi-environment design including seven French locations, six growing seasons (2009 to 2014) and two nitrogen nutrition levels (optimal versus limited). Very few genotype × nitrogen interactions were detected, and a large proportion of the QTL were stable across nitrogen nutrition conditions. In contrast, strong genotype × trial interactions in which most of the QTL were specific to a single trial were found. To obtain further insight into the QTL × environment interactions, genetic analyses of ecovalence were performed to identify the genomic regions contributing to the genotype × nitrogen and genotype × trial interactions. Fifty-one critical genomic regions contributing to the additive genetic control of yield-associated traits were identified, and the structural organization of these regions in the genome was investigated. Our results demonstrated that the effect of the trial was greater than the effect of nitrogen nutrition levels on seed yield-related traits under our experimental conditions. Nevertheless, critical genomic regions associated with yield that were stable across environments were identified in rapeseed.

Water-quality assessment of Steiner Branch basin, Lafayette County, Wisconsin

USGS Publications Warehouse

Field, Stephen J.; Lidwin, R.A.

1982-01-01

Most of the nutrient load of the stream was transported during runoff: total organic nitrogen, 80 percent; ammonia nitrogen, 80 percent; total phosphorus, 84 percent; and total orthophosphorus, 77 percent. Transport of nitrite plus nitrate nitrogen and total nitrogen occurred primarily during baseflow conditions, with 75 and 56 percent, respectively, of the total load for the study period being transported during these conditions. The time distribution of total phosphorus, total orthophosphorus, ammonia nitrogen, and total organic nitrogen transport was very similar to suspended-sediment transport in Steiner Branch.

Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages

DOE PAGES

Hug, Laura A.; Thomas, Brian C.; Sharon, Itai; ...

2015-07-22

Nitrogen, sulfur and carbon fluxes in the terrestrial subsurface are determined by the intersecting activities of microbial community members, yet the organisms responsible are largely unknown. Metagenomic methods can identify organisms and functions, but genome recovery is often precluded by data complexity. To address this limitation, we developed subsampling assembly methods to re-construct high-quality draft genomes from complex samples. Here, we applied these methods to evaluate the interlinked roles of the most abundant organisms in biogeochemical cycling in the aquifer sediment. Community proteomics confirmed these activities. The eight most abundant organisms belong to novel lineages, and two represent phyla withmore » no previously sequenced genome. Four organisms are predicted to fix carbon via the Calvin Benson Bassham, Wood Ljungdahl or 3-hydroxyproprionate/4-hydroxybutarate pathways. The profiled organisms are involved in the network of denitrification, dissimilatory nitrate reduction to ammonia, ammonia oxidation and sulfate reduction/oxidation, and require substrates supplied by other community members. An ammonium-oxidizing Thaumarchaeote is the most abundant community member, despite low ammonium concentrations in the groundwater. Finally, this organism likely benefits from two other relatively abundant organisms capable of producing ammonium from nitrate, which is abundant in the groundwater. Overall, dominant members of the microbial community are interconnected through exchange of geochemical resources.« less

Refiners Switch to RFG Complex Model

EIA Publications

1998-01-01

On January 1, 1998, domestic and foreign refineries and importers must stop using the "simple" model and begin using the "complex" model to calculate emissions of volatile organic compounds (VOC), toxic air pollutants (TAP), and nitrogen oxides (NOx) from motor gasoline. The primary differences between application of the two models is that some refineries may have to meet stricter standards for the sulfur and olefin content of the reformulated gasoline (RFG) they produce and all refineries will now be held accountable for NOx emissions. Requirements for calculating emissions from conventional gasoline under the anti-dumping rule similarly change for exhaust TAP and NOx. However, the change to the complex model is not expected to result in an increase in the price premium for RFG or constrain supplies.

Energy transfer in the Congo deep-sea fan: From terrestrially-derived organic matter to chemosynthetic food webs

NASA Astrophysics Data System (ADS)

Pruski, A. M.; Decker, C.; Stetten, E.; Vétion, G.; Martinez, P.; Charlier, K.; Senyarich, C.; Olu, K.

2017-08-01

Large amounts of recent terrestrial organic matter (OM) from the African continent are delivered to the abyssal plain by turbidity currents and accumulate in the Congo deep-sea fan. In the recent lobe complex, large clusters of vesicomyid bivalves are found all along the active channel in areas of reduced sediment. These soft-sediment communities resemble those fuelled by chemoautotrophy in cold-seep settings. The aim of this study was to elucidate feeding strategies in these macrofaunal assemblages as part of a greater effort to understand the link between the inputs of terrestrially-derived OM and the chemosynthetic habitats. The biochemical composition of the sedimentary OM was first analysed in order to evaluate how nutritious the available particulate OM is for the benthic macrofauna. The terrestrial OM is already degraded when it reaches the final depositional area. However, high biopolymeric carbon contents (proteins, carbohydrates and lipids) are found in the channel of the recent lobe complex. In addition, about one to two thirds of the nitrogen can be assigned to peptide-like material. Even if this soil-derived OM is poorly digestible, turbiditic deposits contain such high amounts of organic carbon that there is enough biopolymeric carbon and proteacinous nitrogen to support dense benthic communities that contrast with the usual depauperate abyssal plains. Stable carbon and nitrogen isotopes and fatty acid biomarkers were then used to shed light on the feeding strategies allowing the energy transfer from the terrestrial OM brought by the turbidity currents to the abyssal food web. In the non-reduced sediment, surface detritivorous holothurians and suspension-feeding poriferans rely on detritic OM, thereby depending directly on the turbiditic deposits. The sulphur-oxidising symbiont bearing vesicomyids closely depend on the reprocessing of OM with methane and sulphide as final products. Their carbon and nitrogen isotopic signatures vary greatly among sites and could reflect the intensity of the anaerobic oxidation of methane (AOM) in the sediments. Within the vesicomyid habitats, the heterotrophic fauna exhibits a distinctively light carbon isotopic signature in comparison to the background sediments, clearly indicating the utilisation of chemosynthetically-derived OM. Fatty acid biomarkers further confirm that dorvilleid polychaetes consume aggregates that perform AOM. Terrestrial OM reprocessing by microbial consortium thus ensures its transfer to the benthic food web in the Congo deep-sea fan.

Deletion of Type I glutamine synthetase deregulates nitrogen metabolism and increases ethanol production in Clostridium thermocellum

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rydzak, Thomas; Garcia, David; Stevenson, David M.

Clostridium thermocellum rapidly deconstructs cellulose and ferments resulting hydrolysis products into ethanol and other products, and is thus a promising platform organism for the development of cellulosic biofuel production via consolidated bioprocessing. And while recent metabolic engineering strategies have targeted eliminating canonical fermentation products (acetate, lactate, formate, and H 2), C. thermocellum also secretes amino acids, which has limited ethanol yields in engineered strains to approximately 70% of the theoretical maximum. To decrease amino acid secretion, we attempted to reduce ammonium assimilation by deleting the Type I glutamine synthetase (glnA) in C. thermocellum. Deletion of glnA reduced levels of secretedmore » valine and total amino acids by 53% and 44% respectively, and increased ethanol yields by 53%. RNA-seq analysis revealed that genes encoding the RNF-complex were more highly expressed in ΔglnA and may have a role in improving NADH-availability for ethanol production. While a significant up-regulation of genes involved in nitrogen assimilation and urea uptake suggested that deletion of glnA induces a nitrogen starvation response, metabolomic analysis showed an increase in intracellular glutamine and α-ketoglutarate levels indicative of nitrogen-rich conditions. Here, we propose that deletion of glnA causes deregulation of nitrogen metabolism, leading to overexpression of nitrogen metabolism genes and, in turn, elevated glutamine/α-ketoglutarate levels. Here we demonstrate that perturbation of nitrogen assimilation is a promising strategy to redirect flux from the production of nitrogenous compounds toward biofuels in C. thermocellum.« less

Deletion of Type I glutamine synthetase deregulates nitrogen metabolism and increases ethanol production in Clostridium thermocellum.

PubMed

Rydzak, Thomas; Garcia, David; Stevenson, David M; Sladek, Margaret; Klingeman, Dawn M; Holwerda, Evert K; Amador-Noguez, Daniel; Brown, Steven D; Guss, Adam M

2017-05-01

Clostridium thermocellum rapidly deconstructs cellulose and ferments resulting hydrolysis products into ethanol and other products, and is thus a promising platform organism for the development of cellulosic biofuel production via consolidated bioprocessing. While recent metabolic engineering strategies have targeted eliminating canonical fermentation products (acetate, lactate, formate, and H 2 ), C. thermocellum also secretes amino acids, which has limited ethanol yields in engineered strains to approximately 70% of the theoretical maximum. To investigate approaches to decrease amino acid secretion, we attempted to reduce ammonium assimilation by deleting the Type I glutamine synthetase (glnA) in an essentially wild type strain of C. thermocellum. Deletion of glnA reduced levels of secreted valine and total amino acids by 53% and 44% respectively, and increased ethanol yields by 53%. RNA-seq analysis revealed that genes encoding the RNF-complex were more highly expressed in ΔglnA and may have a role in improving NADH-availability for ethanol production. While a significant up-regulation of genes involved in nitrogen assimilation and urea uptake suggested that deletion of glnA induces a nitrogen starvation response, metabolomic analysis showed an increase in intracellular glutamine levels indicative of nitrogen-rich conditions. We propose that deletion of glnA causes deregulation of nitrogen metabolism, leading to overexpression of nitrogen metabolism genes and, in turn, elevated glutamine levels. Here we demonstrate that perturbation of nitrogen assimilation is a promising strategy to redirect flux from the production of nitrogenous compounds toward biofuels in C. thermocellum. Copyright © 2017. Published by Elsevier Inc.

PHOTOCHEMICAL MINERALIZATION OF DISSOLVED ORGANIC NITROGEN TO AMMONIUM IN THE BALTIC SEA

EPA Science Inventory

Solar radiation-induced photochemistry can be considered as a new source of nutrients when photochemical reactions release bioavailable nitrogen from biologically non-reactive dissolved organic nitrogen (DON). Pretreatments of Baltic Sea waters in the dark indicated that >72% of ...

Synthesis and Characterization of Electroresponsive Materials with Applications In: Part I. Second Harmonic Generation. Part II. Organic-Lanthanide Ion Complexes for Electroluminescence and Optical Amplifiers.

NASA Astrophysics Data System (ADS)

Claude, Charles

1995-01-01

Materials for optical waveguides were developed from two different approaches, inorganic-organic composites and soft gel polymers. Inorganic-organic composites were developed from alkoxysilane and organically modified silanes based on nonlinear optical chromophores. Organically modified silanes based on N-((3^' -trialkoxysilyl)propyl)-4-nitroaniline were synthesized and sol-gelled with trimethoxysilane. After a densification process at 190^circC with a corona discharge, the second harmonic of the film was measured with a Nd:YAG laser with a fundamental wavelength of 1064nm, d_{33} = 13pm/V. The decay of the second harmonic was expressed by a stretched bi-exponential equation. The decay time (tau _2) was equal to 3374 hours, and was comparable to nonlinear optical systems based on epoxy/Disperse Orange 1. The processing temperature of the organically modified silane was limited to 200^circC due to the decomposition of the organic chromophore. Soft gel polymers were synthesized and characterized for the development of optical waveguides with dc-electrical field assisted phase-matching. Polymers based on 4-nitroaniline terminated poly(ethylene oxide-co-propylene oxide) were shown to exhibit second harmonic generation that were optically phase-matched in an electrical field. The optical signals were stable and reproducible. Siloxane polymers modified with 1-mercapto-4-nitrobenzene and 1-mercapto-4-methylsulfonylstilbene nonlinear optical chromophores were synthesized. The physical and the linear and nonlinear optical properties of the polymers were characterized. Waveguides were developed from the polymers which were optically phase -matched and had an efficiency of 8.1%. The siloxane polymers exhibited optical phase-matching in an applied electrical field and can be used with a semiconductor laser. Organic lanthanide ion complexes for electroluminescence and optical amplifiers were synthesized and characterized. The complexes were characterized for their thermal and oxidative stability and for their optical properties. Organic-europium ion complexes based on derivatives of 2-benzoyl benzoate are stable to a temperature 70^circ C higher than the europium beta -diketonate complexes. The optical and fluorescence properties of the organic-europium ion complexes were characterized. The methoxy and the t-butyl derivatives of the europium 2-benzoylbenzoate complexes exhibited fluorescence quantum efficiencies that were comparable to europium tris(thenoyl trifluoroacetonate) in methylene chloride but the extinction coefficient was two-thirds of the europium thenoyltrifluoroacetonate complexes. The last complex characterized was the europium bis(diphenylphosphino)imine complex. The complex exhibited thermal stability to 550 ^circC under nitrogen.

Massive isotopic effect in vacuum UV photodissociation of N2 and implications for meteorite data

PubMed Central

Chakraborty, Subrata; Muskatel, B. H.; Jackson, Teresa L.; Ahmed, Musahid; Levine, R. D.; Thiemens, Mark H.

2014-01-01

Nitrogen isotopic distributions in the solar system extend across an enormous range, from −400‰, in the solar wind and Jovian atmosphere, to about 5,000‰ in organic matter in carbonaceous chondrites. Distributions such as these require complex processing of nitrogen reservoirs and extraordinary isotope effects. While theoretical models invoke ion-neutral exchange reactions outside the protoplanetary disk and photochemical self-shielding on the disk surface to explain the variations, there are no experiments to substantiate these models. Experimental results of N2 photolysis at vacuum UV wavelengths in the presence of hydrogen are presented here, which show a wide range of enriched δ15N values from 648‰ to 13,412‰ in product NH3, depending upon photodissociation wavelength. The measured enrichment range in photodissociation of N2, plausibly explains the range of δ15N in extraterrestrial materials. This study suggests the importance of photochemical processing of the nitrogen reservoirs within the solar nebula. PMID:25267643

Advances in algal-prokaryotic wastewater treatment: A review of nitrogen transformations, reactor configurations and molecular tools.

PubMed

Wang, Meng; Keeley, Ryan; Zalivina, Nadezhda; Halfhide, Trina; Scott, Kathleen; Zhang, Qiong; van der Steen, Peter; Ergas, Sarina J

2018-07-01

The synergistic activity of algae and prokaryotic microorganisms can be used to improve the efficiency of biological wastewater treatment, particularly with regards to nitrogen removal. For example, algae can provide oxygen through photosynthesis needed for aerobic degradation of organic carbon and nitrification and harvested algal-prokaryotic biomass can be used to produce high value chemicals or biogas. Algal-prokaryotic consortia have been used to treat wastewater in different types of reactors, including waste stabilization ponds, high rate algal ponds and closed photobioreactors. This review addresses the current literature and identifies research gaps related to the following topics: 1) the complex interactions between algae and prokaryotes in wastewater treatment; 2) advances in bioreactor technologies that can achieve high nitrogen removal efficiencies in small reactor volumes, such as algal-prokaryotic biofilm reactors and enhanced algal-prokaryotic treatment systems (EAPS); 3) molecular tools that have expanded our understanding of the activities of algal and prokaryotic communities in wastewater treatment processes. Copyright © 2018 Elsevier Ltd. All rights reserved.

Rate and yield relationships in the production of xanthan gum by batch fermentations using complex and chemically defined growth media

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pinches, A.; Pallent, L.J.

1986-10-01

Rate and yield information relating to biomass and product formation and to nitrogen, glucose and oxygen consumption are described for xanthan gum batch fermentations in which both chemically defined (glutamate nitrogen) and complex (peptone nitrogen) media are employed. Simple growth and product models are used for data interpretation. For both nitrogen sources, rate and yield parameter estimates are shown to be independent of initial nitrogen concentrations. For stationary phases, specific rates of gum production are shown to be independent of nitrogen source but dependent on initial nitrogen concentration. The latter is modeled empirically and suggests caution in applying simple productmore » models to xanthan gum fermentations. 13 references.« less

Overstory vegetation influence nitrogen and dissolved organic carbon flux from the atmosphere to the forest floor: Boreal Plain, Canada

Treesearch

David E. Pelster; Randall K. Kolka; Ellie E. Prepas

2009-01-01

Nitrate, ammonium, total dissolved nitrogen (TDN), dissolved organic nitrogen (DON) and dissolved organic carbon (DOC) concentrations and flux were measured for one year in bulk deposition and throughfall from three stand types (upland deciduous, upland conifer and wetland conifer) on the Boreal Plain, Canada. Annual (November 2006 to October 2007 water year) flux...

Sedimentary Nitrogen Stable Isotopes and Variations in Nutrient Cycling in the Holocene Black Sea

NASA Astrophysics Data System (ADS)

Fulton, J. M.; Arthur, M. A.

2004-12-01

Interpreting the evolution of organic matter production and preservation in anoxic basins such as the Holocene Black Sea depends on developing an understanding of changes in nutrient cycling within the water column with time. The organic fraction of sediments may preserve evidence of such changes in nutrient utilization. One model proposes changes in phosphorus availability as a driver for changes in algal productivity in the Black Sea. Nitrogen, the other macronutrient commonly considered to limit algal growth, is the focus of this study as we examine the nitrogen content and stable isotope variations of Black Sea sediments to determine what role it may have played in temporal changes in productivity and organic matter accumulation. High-resolution samples from five gravity cores collected by the RV Knorr 1988 expedition were analyzed for δ 15N-total and δ 13C-organic as well as their percent composition of organic carbon and total nitrogen. One core, GC71, was subjected to sequential extractions with KCl and hydrogen peroxide to remove exchangeable ammonia and labile organic matter respectively. The KCl extraction did not remove a statistically significant amount of ammonia, having no measurable effect on the percent nitrogen or δ 15N of the solid samples. The hydrogen peroxide extraction removed ca. 95% of the organic carbon and 85% of the nitrogen, leaving a relatively nitrogen-enriched residual material, probably due to ammonium fixed within the clay lattice. The fixed nitrogen has a minimal effect on the bulk nitrogen isotope values, suggesting the bulk nitrogen values are similar to the organic nitrogen signal. All cores examined were from below the modern Black Sea chemocline and are thought to have remained under anoxic bottom water continuously since soon after the incursion of saline Mediterranean water ca. 7800 years ago. Water depths for these cores range from 411 meters along the south margin of the sea to 2088 meters in the eastern Black Sea basin, and the samples analyzed span the past 10,000 years. This study incorporates new nitrogen isotopic data, higher resolution carbon isotopic data, and C/N ratios with previously published bulk organic carbon, Rock-Eval pyrolysis, regional climate, and molecular organic geochemical data from other sources. The results of this study reveal three intervals in sedimentary units I, IIa, and IIb, preserved in multiple cores, with less enriched δ 15N values from +0.3 to +1.5 permil, separated by positive excursions with δ 15N values between +3 and +4.5 permil. These intervals are the result of basin-wide processes as they occurred synchronously across the Black Sea. δ 13C values suggest a primarily marine source for organic matter throughout units I and II, and fluctuations of δ 15N do not seem to correlate with regional vegetation or precipitation changes; thus, assuming a relatively constant δ 15N for inorganic and organic nitrogen riverine influx, changes in δ 15N are due primarily to marine activity. We believe the lower δ 15N values in units I and IIa were caused by decreases in water column denitrification due to a deeper chemocline and greater oxygen availability for respiration. The lower δ 15N values in unit IIb may be due to nitrogen fixation caused by the release of excess phosphorus from the sediments due to the bottom water anoxia.

Chesapeake Bay nitrogen fluxes derived from a land-estuarine ocean biogeochemical modeling system: Model description, evaluation, and nitrogen budgets.

PubMed

Feng, Yang; Friedrichs, Marjorie A M; Wilkin, John; Tian, Hanqin; Yang, Qichun; Hofmann, Eileen E; Wiggert, Jerry D; Hood, Raleigh R

2015-08-01

The Chesapeake Bay plays an important role in transforming riverine nutrients before they are exported to the adjacent continental shelf. Although the mean nitrogen budget of the Chesapeake Bay has been previously estimated from observations, uncertainties associated with interannually varying hydrological conditions remain. In this study, a land-estuarine-ocean biogeochemical modeling system is developed to quantify Chesapeake riverine nitrogen inputs, within-estuary nitrogen transformation processes and the ultimate export of nitrogen to the coastal ocean. Model skill was evaluated using extensive in situ and satellite-derived data, and a simulation using environmental conditions for 2001-2005 was conducted to quantify the Chesapeake Bay nitrogen budget. The 5 year simulation was characterized by large riverine inputs of nitrogen (154 × 10 9  g N yr -1 ) split roughly 60:40 between inorganic:organic components. Much of this was denitrified (34 × 10 9  g N yr -1 ) and buried (46 × 10 9  g N yr -1 ) within the estuarine system. A positive net annual ecosystem production for the bay further contributed to a large advective export of organic nitrogen to the shelf (91 × 10 9  g N yr -1 ) and negligible inorganic nitrogen export. Interannual variability was strong, particularly for the riverine nitrogen fluxes. In years with higher than average riverine nitrogen inputs, most of this excess nitrogen (50-60%) was exported from the bay as organic nitrogen, with the remaining split between burial, denitrification, and inorganic export to the coastal ocean. In comparison to previous simulations using generic shelf biogeochemical model formulations inside the estuary, the estuarine biogeochemical model described here produced more realistic and significantly greater exports of organic nitrogen and lower exports of inorganic nitrogen to the shelf.

Chesapeake Bay nitrogen fluxes derived from a land‐estuarine ocean biogeochemical modeling system: Model description, evaluation, and nitrogen budgets

PubMed Central

Friedrichs, Marjorie A. M.; Wilkin, John; Tian, Hanqin; Yang, Qichun; Hofmann, Eileen E.; Wiggert, Jerry D.; Hood, Raleigh R.

2015-01-01

Abstract The Chesapeake Bay plays an important role in transforming riverine nutrients before they are exported to the adjacent continental shelf. Although the mean nitrogen budget of the Chesapeake Bay has been previously estimated from observations, uncertainties associated with interannually varying hydrological conditions remain. In this study, a land‐estuarine‐ocean biogeochemical modeling system is developed to quantify Chesapeake riverine nitrogen inputs, within‐estuary nitrogen transformation processes and the ultimate export of nitrogen to the coastal ocean. Model skill was evaluated using extensive in situ and satellite‐derived data, and a simulation using environmental conditions for 2001–2005 was conducted to quantify the Chesapeake Bay nitrogen budget. The 5 year simulation was characterized by large riverine inputs of nitrogen (154 × 109 g N yr−1) split roughly 60:40 between inorganic:organic components. Much of this was denitrified (34 × 109 g N yr−1) and buried (46 × 109 g N yr−1) within the estuarine system. A positive net annual ecosystem production for the bay further contributed to a large advective export of organic nitrogen to the shelf (91 × 109 g N yr−1) and negligible inorganic nitrogen export. Interannual variability was strong, particularly for the riverine nitrogen fluxes. In years with higher than average riverine nitrogen inputs, most of this excess nitrogen (50–60%) was exported from the bay as organic nitrogen, with the remaining split between burial, denitrification, and inorganic export to the coastal ocean. In comparison to previous simulations using generic shelf biogeochemical model formulations inside the estuary, the estuarine biogeochemical model described here produced more realistic and significantly greater exports of organic nitrogen and lower exports of inorganic nitrogen to the shelf. PMID:27668137

Utility of charge-transfer complexation for the assessment of macrocyclic polyethers: Spectroscopic, thermal and surface morphology characteristics of two highly crown ethers complexed with acido acceptors

NASA Astrophysics Data System (ADS)

Refat, Moamen S.; Adam, Abdel Majid A.; Saad, Hosam A.

2015-04-01

The study of the complexing ability of macrocyclic compounds to organic and inorganic substances is of great interest. The aim of this work is to provide basic data that can be used to the assessment of macrocyclic crown ethers quantitatively based on charge-transfer (CT) complexation. This goal was achieved by preparing CT complexes of two interesting mixed nitrogen-oxygen crown ethers with acido acceptors (chloranilic and picric acid), which were fully structurally characterized. The crown ethers are 4,7,13,16,21,24-hexaoxa-1,10-diazabicyclo[8.8.8]hexacosane (HDHC) and 1,4,10-trioxa-7,13-diaza-cyclopentadecane (TDPD). The obtained complexes were structurally characterized via elemental analysis, IR, Raman, 1H NMR, and UV-visible spectroscopy. Thermal properties of these complexes were also studied, and their kinetic thermodynamic parameters were calculated. Furthermore, the microstructure properties of these complexes have also been investigated using X-ray diffraction (XRD) and scanning electron microscope (SEM).

Structural analysis of the coordination of dinitrogen to transition metal complexes.

PubMed

Peigné, Benjamin; Aullón, Gabriel

2015-06-01

Transition-metal complexes show a wide variety of coordination modes for the nitrogen molecule. A structural database study has been undertaken for dinitrogen complexes, and geometrical parameters around the L(n)M-N2 unit are retrieved from the Cambridge Structural Database. These data were classified in families of compounds, according to metal properties, to determine the degree of lengthening for the dinitrogen bonding. The importance of the nature of the metal center, such as coordination number and electronic configuration, is reported. Our study reveals poor activation by coordination of dinitrogen in mononuclear complexes, always having end-on coordination. However, partial weakening of nitrogen-nitrogen bonding is found for end-on binuclear complexes, whereas side-on complexes can be completely activated.

Spectroscopic characterization of charge-transfer complexes of morpholine with chloranilic and picric acids in organic media: crystal structure of bis(morpholinium 2,4,6-trinitrocyclohexanolate).

PubMed

Refat, Moamen S; El-Zayat, Lamia A; Yeşilel, Okan Zafer

2010-02-01

Electron donor-acceptor interaction of morpholine (morp) with chloranilic acid (cla) and picric acid (pa) as pi-acceptors was investigated spectrophotometrically and found to form stable charge-transfer (CT) complexes (n-pi*) of [(Hmorp)(2)(cla)] and [(Hmorp)(pa)](2). The donor site involved in CT interaction is morpholine nitrogen. These complexes are easily synthesized from the reaction of morp with cla and pa within MeOH and CHCl(3) solvents, respectively. (1)HNMR, IR, elemental analyses, and UV-vis techniques characterize the two morpholinium charge-transfer complexes. Benesi-Hildebrand and its modification methods were applied to the determination of association constant (K), molar extinction coefficient (epsilon). The X-ray crystal structure was carried out for the interpretation the predict structure of the [(Hmorp)(pa)](2) complex. Copyright (c) 2009 Elsevier B.V. All rights reserved.

Spectroscopic characterization of charge-transfer complexes of morpholine with chloranilic and picric acids in organic media: Crystal structure of bis(morpholinium 2,4,6-trinitrocyclohexanolate)

NASA Astrophysics Data System (ADS)

Refat, Moamen S.; El-Zayat, Lamia A.; Yeşilel, Okan Zafer

2010-02-01

Electron donor-acceptor interaction of morpholine (morp) with chloranilic acid (cla) and picric acid (pa) as π-acceptors was investigated spectrophotometrically and found to form stable charge-transfer (CT) complexes (n-π*) of [(Hmorp) 2(cla)] and [(Hmorp)(pa)] 2. The donor site involved in CT interaction is morpholine nitrogen. These complexes are easily synthesized from the reaction of morp with cla and pa within MeOH and CHCl 3 solvents, respectively. 1HNMR, IR, elemental analyses, and UV-vis techniques characterize the two morpholinium charge-transfer complexes. Benesi-Hildebrand and its modification methods were applied to the determination of association constant ( K), molar extinction coefficient ( ɛ). The X-ray crystal structure was carried out for the interpretation the predict structure of the [(Hmorp)(pa)] 2 complex.

Nitrogen, phosphorus, organic carbon, and biochemical oxygen demand : in Florida surface waters, 1972

USGS Publications Warehouse

Kaufman, Matthew I.; Dysart, J.E.

1978-01-01

Water samples were collected during spring and autumn 1972 from about 100 surface-water sites in Florida. The samples were analyzed for the plant nutrients, nitrogen and phosphorus. In most waters, nitrogen concentrations are less than 2.0 milligrams per liter as nitrogen, and organic nitrogen is dominant. Median total nitrogen concentration for Florida surface waters is between 1.2 and 2.0 milligrams per liter as nitrogen. In samples from 85 percent of the sites, total nitrogen exceeded 0.6 milligrams per liter. Median total phosphorus concentration as phosphorus for Florida surface waters is between 0.05 and 0.1 milligrams per liter. The information will form a base useful to agencies concerned with setting concentration limits for nitrogen and phosphorus in industrial and sewage plant outfalls. (Woodard-USGS)

Enzyme activity in terrestrial soil in relation to exploration of the Martian surface

NASA Technical Reports Server (NTRS)

Ardakani, M. S.; Mclaren, A. D.; Pukite, A. H.

1972-01-01

An exploration was made of enzyme activities in soil, including abundance, persistence and localization of these activities. An attempt was made to develop procedures for the detection and assaying of enzymes in soils suitable for presumptive tests for life in planetary soils. A suitable extraction procedure for soil enzymes was developed and measurements were made of activities in extracts in order to study how urease is complexed in soil organic matter. Mathematical models were developed, based on enzyme action and microbial growth in soil, for rates of oxidation of nitrogen as nitrogen compounds are moved downward in soil by water flow. These biogeochemical models should be applicable to any percolating system, with suitable modification for special features, such as oxygen concetrations, and types of hydrodynamic flow.

Utilization of organic nitrogen by arbuscular mycorrhizal fungi-is there a specific role for protists and ammonia oxidizers?

PubMed

Bukovská, Petra; Bonkowski, Michael; Konvalinková, Tereza; Beskid, Olena; Hujslová, Martina; Püschel, David; Řezáčová, Veronika; Gutiérrez-Núñez, María Semiramis; Gryndler, Milan; Jansa, Jan

2018-04-01

Arbuscular mycorrhizal (AM) fungi can significantly contribute to plant nitrogen (N) uptake from complex organic sources, most likely in concert with activity of soil saprotrophs and other microbes releasing and transforming the N bound in organic forms. Here, we tested whether AM fungus (Rhizophagus irregularis) extraradical hyphal networks showed any preferences towards certain forms of organic N (chitin of fungal or crustacean origin, DNA, clover biomass, or albumin) administered in spatially discrete patches, and how the presence of AM fungal hyphae affected other microbes. By direct 15 N labeling, we also quantified the flux of N to the plants (Andropogon gerardii) through the AM fungal hyphae from fungal chitin and from clover biomass. The AM fungal hyphae colonized patches supplemented with organic N sources significantly more than those receiving only mineral nutrients, organic carbon in form of cellulose, or nothing. Mycorrhizal plants grew 6.4-fold larger and accumulated, on average, 20.3-fold more 15 N originating from the labeled organic sources than their nonmycorrhizal counterparts. Whereas the abundance of microbes (bacteria, fungi, or Acanthamoeba sp.) in the different patches was primarily driven by patch quality, we noted a consistent suppression of the microbial abundances by the presence of AM fungal hyphae. This suppression was particularly strong for ammonia oxidizing bacteria. Our results indicate that AM fungi successfully competed with the other microbes for free ammonium ions and suggest an important role for the notoriously understudied soil protists to play in recycling organic N from soil to plants via AM fungal hyphae.

Transgenic approaches to altering carbon and nitrogen partitioning in whole plants: assessing the potential to improve crop yields and nutritional quality

DOE PAGES

Yadav, Umesh P.; Ayre, Brian G.; Bush, Daniel R.

2015-04-22

The principal components of plant productivity and nutritional value, from the standpoint of modern agriculture, are the acquisition and partitioning of organic carbon (C) and nitrogen (N) compounds among the various organs of the plant. The flow of essential organic nutrients among the plant organ systems is mediated by its complex vascular system, and is driven by a series of transport steps including export from sites of primary assimilation, transport into and out of the phloem and xylem, and transport into the various import-dependent organs. Manipulating C and N partitioning to enhance yield of harvested organs is evident in themore » earliest crop domestication events and continues to be a goal for modern plant biology. Research on the biochemistry, molecular and cellular biology, and physiology of C and N partitioning has now matured to an extent that strategic manipulation of these transport systems through biotechnology are being attempted to improve movement from source to sink tissues in general, but also to target partitioning to specific organs. These nascent efforts are demonstrating the potential of applied biomass targeting but are also identifying interactions between essential nutrients that require further basic research. In this review, we summarize the key transport steps involved in C and N partitioning, and discuss various transgenic approaches for directly manipulating key C and N transporters involved. In addition, we propose several experiments that could enhance biomass accumulation in targeted organs while simultaneously testing current partitioning models.« less

Transgenic approaches to altering carbon and nitrogen partitioning in whole plants: assessing the potential to improve crop yields and nutritional quality

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yadav, Umesh P.; Ayre, Brian G.; Bush, Daniel R.

The principal components of plant productivity and nutritional value, from the standpoint of modern agriculture, are the acquisition and partitioning of organic carbon (C) and nitrogen (N) compounds among the various organs of the plant. The flow of essential organic nutrients among the plant organ systems is mediated by its complex vascular system, and is driven by a series of transport steps including export from sites of primary assimilation, transport into and out of the phloem and xylem, and transport into the various import-dependent organs. Manipulating C and N partitioning to enhance yield of harvested organs is evident in themore » earliest crop domestication events and continues to be a goal for modern plant biology. Research on the biochemistry, molecular and cellular biology, and physiology of C and N partitioning has now matured to an extent that strategic manipulation of these transport systems through biotechnology are being attempted to improve movement from source to sink tissues in general, but also to target partitioning to specific organs. These nascent efforts are demonstrating the potential of applied biomass targeting but are also identifying interactions between essential nutrients that require further basic research. In this review, we summarize the key transport steps involved in C and N partitioning, and discuss various transgenic approaches for directly manipulating key C and N transporters involved. In addition, we propose several experiments that could enhance biomass accumulation in targeted organs while simultaneously testing current partitioning models.« less

Linking annual N2O emission in organic soils to mineral nitrogen input as estimated by heterotrophic respiration and soil C/N ratio.

PubMed

Mu, Zhijian; Huang, Aiying; Ni, Jiupai; Xie, Deti

2014-01-01

Organic soils are an important source of N2O, but global estimates of these fluxes remain uncertain because measurements are sparse. We tested the hypothesis that N2O fluxes can be predicted from estimates of mineral nitrogen input, calculated from readily-available measurements of CO2 flux and soil C/N ratio. From studies of organic soils throughout the world, we compiled a data set of annual CO2 and N2O fluxes which were measured concurrently. The input of soil mineral nitrogen in these studies was estimated from applied fertilizer nitrogen and organic nitrogen mineralization. The latter was calculated by dividing the rate of soil heterotrophic respiration by soil C/N ratio. This index of mineral nitrogen input explained up to 69% of the overall variability of N2O fluxes, whereas CO2 flux or soil C/N ratio alone explained only 49% and 36% of the variability, respectively. Including water table level in the model, along with mineral nitrogen input, further improved the model with the explanatory proportion of variability in N2O flux increasing to 75%. Unlike grassland or cropland soils, forest soils were evidently nitrogen-limited, so water table level had no significant effect on N2O flux. Our proposed approach, which uses the product of soil-derived CO2 flux and the inverse of soil C/N ratio as a proxy for nitrogen mineralization, shows promise for estimating regional or global N2O fluxes from organic soils, although some further enhancements may be warranted.

Biophysical Controls over Carbon and Nitrogen Stocks in Desert Playa Wetlands

NASA Astrophysics Data System (ADS)

McKenna, O. P.; Sala, O. E.

2014-12-01

Playas are ephemeral desert wetlands situated at the bottom of closed catchments. Desert playas in the Southwestern US have not been intensively studied despite their potential importance for the functioning of desert ecosystems. We want to know which geomorphic and ecological variables control of the stock size of soil organic carbon, and soil total nitrogen in playas. We hypothesize that the magnitude of carbon and nitrogen stocks depends on: (a) catchment size, (b) catchment slope, (d) catchment vegetation cover, (e) bare-ground patch size, and (f) catchment soil texture. We chose thirty playas from across the Jornada Basin (Las Cruces, NM) ranging from 0.5-60ha in area and with varying catchment characteristics. We used the available 5m digital elevation map (DEM) to calculate the catchment size and catchment slope for these thirty playas. We measured percent cover, and patch size using the point-intercept method with three 10m transects in each catchment. We used the Bouyoucos-hydrometer soil particle analysis to determine catchment soil texture. Stocks of organic carbon and nitrogen were measured from soil samples at four depths (0-10 cm, 10-30 cm, 30-60 cm, 60-100 cm) using C/N combustion analysis. In terms of nitrogen and organic carbon storage, we found soil nitrogen values in the top 10cm ranging from 41.963-214.365 gN/m2, and soil organic carbon values in the top 10cm ranging from 594.339-2375.326 gC/m2. The results of a multiple regression analysis show a positive relationship between catchment slope and both organic carbon and nitrogen stock size (nitrogen: y= 56.801 +47.053, R2=0.621; organic carbon: y= 683.200 + 499.290x, R2= 0.536). These data support our hypothesis that catchment slope is one of factors controlling carbon and nitrogen stock in desert playas. We also applied our model to the 69 other playas of the Jornada Basin and estimated stock sizes (0-10cm) between 415.07-447.97 Mg for total soil nitrogen and 4627.99-5043.51 Mg for soil organic carbon.

78 FR 46552 - Approval and Promulgation of Air Quality Implementation Plans; Massachusetts; Regulations...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-01

... Volatile Organic Compounds and Nitrogen Oxides AGENCY: Environmental Protection Agency (EPA). ACTION... requirements for stationary sources of volatile organic compounds (VOCs) and nitrogen oxides (NO X ). This... to 310 CMR 7.19, Reasonably Available Control Technology (RACT) for Sources of Oxides of Nitrogen (NO...

Organic nitrogen in aerosols at a forest site in southern Appalachia

EPA Science Inventory

This study investigates the composition of organic particulate matter (PM2.5) in a remote montane forest in the southeastern U.S., focusing on the role of organic nitrogen (N) in sulfur-containing secondary organic aerosol (SOA) and aerosols associated with biomass burning. Meas...

Soil Organic Carbon and Nitrogen in the 21st Century: Projections of the Responses of an Old-Growth Douglas-Fir Forest in the Pacific Northwest under RCP 4.5 and RCP 8.5 Climate Change Scenarios

NASA Astrophysics Data System (ADS)

Dong, Z.; Driscoll, C. T.; Hayhoe, K.; Pourmokhtarian, A.; Stoner, A. M. K.

2015-12-01

The biogeochemical model, PnET-BGC, was applied to Watershed 2 in H. J. Andrews Experimental Forest, Oregon, to project ecosystem carbon and nitrogen responses under different future climate change scenarios. Downscaled climate change inputs derived from two IPCC scenarios (RCP 4.5 and RCP 8.5) were interpreted by four Atmosphere-Ocean General Circulation Models (AOGCMs) at Andrews Forest. Model results showed decreases in foliar production under high temperature/CO2 scenarios due to increasing vapor pressure deficit. Projections by PnET-BGC suggest that under future climate changes in primary production coupled with an increasing rate of decomposition may result in decreases in litterfall carbon and nitrogen and soil organic carbon and nitrogen. Such changes in soil organic carbon and nitrogen may cause wide range of changes in ecosystem processing of nitrogen and carbon, such as nitrogen mineralization, plant NH4+ uptake, and stream NH4+ and dissolved organic carbon concentrations depending on climate change scenario considered. Under most high emission scenarios, net nitrogen mineralization and plant NH4+ uptake are projected to increase until the end of this century as result of increasing temperature and associated higher rates of decomposition. An accumulation of nitrogen in plant tissue due to decreasing litterfall decreases plant demand for nitrogen. Such changes in nitrogen mineralization and uptake will result in increase in stream NH4+ concentrations under high emission scenarios. Under low emission scenarios, net nitrogen mineralization and plant NH4+ uptake are projected to increase up to mid-century, then slightly decrease until the end of the century.

[Dynamics of carbon and nitrogen storage of Cupressus chengiana plantations in the arid valley of Minjiang River, Southwest China].

PubMed

Luo, Da; Feng, Qiu-hong; Shi, Zuo-min; Li, Dong-sheng; Yang, Chang-xu; Liu, Qian-li; He, Jian-she

2015-04-01

The carbon and nitrogen storage and distribution patterns of Cupressus chengiana plantation ecosystems with different stand ages in the arid valley of Minjiang River were studied. The results showed that carbon contents in different organs of C. chengiana were relatively stable, while nitrogen contents were closely related to different organs, and soil organic carbon and nitrogen contents increased with the stand age. Carbon and nitrogen storage in vegetation layer, soil layer, and the whole ecosystem of the plantation increased with the stand age. The values of total carbon storage in the 13-, 11-, 8-, 6- and 4-year-old C. chengiana plantation ecosystems were 190.90, 165.91, 144.57, 119.44, and 113.49 t x hm(-2), and the values of total nitrogen storage were 19.09, 17.97, 13.82, 13.42, and 12.26 t x hm(-2), respectively. Most of carbon and nitrogen were stored in the 0-60 cm soil layer in the plantation ecosystems and occupied 92.8% and 98.8%, respectively, and the amounts of carbon and nitrogen stored in the top 0-20 cm soil layer, accounted for 54.4% and 48.9% of those in the 0-60 cm soil layer, respectively. Difference in distribution of carbon and nitrogen storage was observed in the vegetation layer. The percentage of carbon storage in tree layer (3.7%) were higher than that in understory vegetation (3.5%), while the percentage of nitrogen storage in tree layer (0.5%) was lower than that in understory (0.7%). The carbon and nitrogen storage and distribution patterns in the plantations varied obviously with the stand age, and the plantation ecosystems at these age stages could accumulate organic carbon and nitrogen continuously.

Modeling the nitrogen cycle one gene at a time

NASA Astrophysics Data System (ADS)

Coles, V.; Stukel, M. R.; Hood, R. R.; Moran, M. A.; Paul, J. H.; Satinsky, B.; Zielinski, B.; Yager, P. L.

2016-02-01

Marine ecosystem models are lagging the revolution in microbial oceanography. As a result, modeling of the nitrogen cycle has largely failed to leverage new genomic information on nitrogen cycling pathways and the organisms that mediate them. We developed a nitrogen based ecosystem model whose community is determined by randomly assigning functional genes to build each organism's "DNA". Microbes are assigned a size that sets their baseline environmental responses using allometric response curves. These responses are modified by the costs and benefits conferred by each gene in an organism's genome. The microbes are embedded in a general circulation model where environmental conditions shape the emergent population. This model is used to explore whether organisms constructed from randomized combinations of metabolic capability alone can self-organize to create realistic oceanic biogeochemical gradients. Community size spectra and chlorophyll-a concentrations emerge in the model with reasonable fidelity to observations. The model is run repeatedly with randomly-generated microbial communities and each time realistic gradients in community size spectra, chlorophyll-a, and forms of nitrogen develop. This supports the hypothesis that the metabolic potential of a community rather than the realized species composition is the primary factor setting vertical and horizontal environmental gradients. Vertical distributions of nitrogen and transcripts for genes involved in nitrification are broadly consistent with observations. Modeled gene and transcript abundance for nitrogen cycling and processing of land-derived organic material match observations along the extreme gradients in the Amazon River plume, and they help to explain the factors controlling observed variability.

GATA Factor Regulation in Excess Nitrogen Occurs Independently of Gtr-Ego Complex-Dependent TorC1 Activation.

PubMed

Tate, Jennifer J; Georis, Isabelle; Rai, Rajendra; Vierendeels, Fabienne; Dubois, Evelyne; Cooper, Terrance G

2015-05-29

The TorC1 protein kinase complex is a central component in a eukaryotic cell's response to varying nitrogen availability, with kinase activity being stimulated in nitrogen excess by increased intracellular leucine. This leucine-dependent TorC1 activation requires functional Gtr1/2 and Ego1/3 complexes. Rapamycin inhibition of TorC1 elicits nuclear localization of Gln3, a GATA-family transcription activator responsible for the expression of genes encoding proteins required to transport and degrade poor nitrogen sources, e.g., proline. In nitrogen-replete conditions, Gln3 is cytoplasmic and Gln3-mediated transcription minimal, whereas in nitrogen limiting or starvation conditions, or after rapamycin treatment, Gln3 is nuclear and transcription greatly increased. Increasing evidence supports the idea that TorC1 activation may not be as central to nitrogen-responsive intracellular Gln3 localization as envisioned previously. To test this idea directly, we determined whether Gtr1/2- and Ego1/3-dependent TorC1 activation also was required for cytoplasmic Gln3 sequestration and repressed GATA factor-mediated transcription by abolishing the Gtr-Ego complex proteins. We show that Gln3 is sequestered in the cytoplasm of gtr1Δ, gtr2Δ, ego1Δ, and ego3Δ strains either long term in logarithmically glutamine-grown cells or short term after refeeding glutamine to nitrogen-limited or -starved cells; GATA factor-dependent transcription also was minimal. However, in all but a gtr1Δ, nuclear Gln3 localization in response to nitrogen limitation or starvation was adversely affected. Our data demonstrate: (i) Gtr-Ego-dependent TorC1 activation is not required for cytoplasmic Gln3 sequestration in nitrogen-rich conditions; (ii) a novel Gtr-Ego-TorC1 activation-independent mechanism sequesters Gln3 in the cytoplasm; (iii) Gtr and Ego complex proteins participate in nuclear Gln3-Myc(13) localization, heretofore unrecognized functions for these proteins; and (iv) the importance of searching for new mechanisms associated with TorC1 activation and/or the regulation of Gln3 localization/function in response to changes in the cells' nitrogen environment. Copyright © 2015 Tate et al.

GATA Factor Regulation in Excess Nitrogen Occurs Independently of Gtr-Ego Complex-Dependent TorC1 Activation

PubMed Central

Tate, Jennifer J.; Georis, Isabelle; Rai, Rajendra; Vierendeels, Fabienne; Dubois, Evelyne; Cooper, Terrance G.

2015-01-01

The TorC1 protein kinase complex is a central component in a eukaryotic cell’s response to varying nitrogen availability, with kinase activity being stimulated in nitrogen excess by increased intracellular leucine. This leucine-dependent TorC1 activation requires functional Gtr1/2 and Ego1/3 complexes. Rapamycin inhibition of TorC1 elicits nuclear localization of Gln3, a GATA-family transcription activator responsible for the expression of genes encoding proteins required to transport and degrade poor nitrogen sources, e.g., proline. In nitrogen-replete conditions, Gln3 is cytoplasmic and Gln3-mediated transcription minimal, whereas in nitrogen limiting or starvation conditions, or after rapamycin treatment, Gln3 is nuclear and transcription greatly increased. Increasing evidence supports the idea that TorC1 activation may not be as central to nitrogen-responsive intracellular Gln3 localization as envisioned previously. To test this idea directly, we determined whether Gtr1/2- and Ego1/3-dependent TorC1 activation also was required for cytoplasmic Gln3 sequestration and repressed GATA factor-mediated transcription by abolishing the Gtr-Ego complex proteins. We show that Gln3 is sequestered in the cytoplasm of gtr1Δ, gtr2Δ, ego1Δ, and ego3Δ strains either long term in logarithmically glutamine-grown cells or short term after refeeding glutamine to nitrogen-limited or -starved cells; GATA factor−dependent transcription also was minimal. However, in all but a gtr1Δ, nuclear Gln3 localization in response to nitrogen limitation or starvation was adversely affected. Our data demonstrate: (i) Gtr-Ego-dependent TorC1 activation is not required for cytoplasmic Gln3 sequestration in nitrogen-rich conditions; (ii) a novel Gtr-Ego-TorC1 activation-independent mechanism sequesters Gln3 in the cytoplasm; (iii) Gtr and Ego complex proteins participate in nuclear Gln3-Myc13 localization, heretofore unrecognized functions for these proteins; and (iv) the importance of searching for new mechanisms associated with TorC1 activation and/or the regulation of Gln3 localization/function in response to changes in the cells’ nitrogen environment. PMID:26024867

Method of removing nitrogen monoxide from a nitrogen monoxide-containing gas using a water-soluble iron ion-dithiocarbamate, xanthate or thioxanthate

DOEpatents

Liu, David K.; Chang, Shih-Ger

1989-01-01

A method of removing nitrogen monoxide from a nitrogen monoxide-containing gas, which method comprises: (a) contacting a nitrogen oxide-containing gas with an aqueous solution of water soluble organic compound-iron ion chelate of the formula: ##STR1## wherein the water-soluble organic compound is selected from compounds of the formula: ##STR2## wherein: R is selected from hydrogen or an organic moiety having at least one polar functional group; Z is selected from oxygen, sulfur, or --N--A wherein N is nitrogen and A is hydrogen or lower alkyl having from one to four carbon atoms; and M is selected from hydrogen, sodium or potassium; and n is 1 or 2, in a contacting zone for a time and at a temperature effective to reduce the nitrogen monoxide. These mixtures are useful to provide an unexpensive method of removing NO from gases, thus reducing atmospheric pollution from flue gases.

Nitrogen competition between corn and weeds in soils under organic and conventional management

USDA-ARS?s Scientific Manuscript database

Cropping systems research has shown that organic systems can have comparable yields to conventional systems at higher weed biomass levels. Higher weed tolerance in organic systems could be due to differences in labile soil organic matter and nitrogen (N) mineralization potential. The objective of ou...

The formation of nitrogen-containing organic oxidation products in a heavily polluted urban environment

NASA Astrophysics Data System (ADS)

Chen, Q.; Cheng, X.; Zheng, Y.; Li, Y.; Zhu, T.; Zhang, Q.; Canagaratna, M. R.; Nowark, J.; Worsnop, D. R.

2017-12-01

Nitrogen-containing organic oxidation products are important species that may contribute to secondary organic aerosol and to redistribute nitrogen oxides through photolysis and oxidation. We deployed a nitrate ion chemical ionization time-of-flight mass spectrometer and a long time-of-flight aerosol mass spectrometer in Beijing for various seasons to study the nitrogen-containing organic species in both gas and particle phases. High concentrations of nitrated phenols were observed in both winter and summer, due to contributions from both primary and secondary sources. The concentrations of gaseous dinitrophenols tracked the severe haze events and correlated well with many highly oxygenated organic molecules. We also identified mass spectral tracers for quantifying organic nitrates. Significant photochemical production of nitrate and organic nitrates were evident during severe haze events, which may contribute to persistent particle formation. The findings are consistent with observed high OH turnover rates, highlighting the importance of gaseous oxidation pathways on persistent particle formation during haze.

Particulate organic matter quality influences nitrate retention and denitrification in stream sediments: evidence from a carbon burial experiment

USGS Publications Warehouse

Stelzer, Robert S.; Scott, J. Thad; Bartsch, Lynn; Parr, Thomas B.

2014-01-01

Organic carbon supply is linked to nitrogen transformation in ecosystems. However, the role of organic carbon quality in nitrogen processing is not as well understood. We determined how the quality of particulate organic carbon (POC) influenced nitrogen transformation in stream sediments by burying identical quantities of varying quality POC (northern red oak (Quercus rubra) leaves, red maple (Acer rubrum) leaves, red maple wood) in stream mesocosms and measuring the effects on nitrogen retention and denitrification compared to a control of combusted sand. We also determined how POC quality affected the quantity and quality of dissolved organic carbon (DOC) and dissolved oxygen concentration in groundwater. Nitrate and total dissolved nitrogen (TDN) retention were assessed by comparing solute concentrations and fluxes along groundwater flow paths in the mesocosms. Denitrification was measured by in situ changes in N2 concentrations (using MIMS) and by acetylene block incubations. POC quality was measured by C:N and lignin:N ratios and DOC quality was assessed by fluorescence excitation emission matrix spectroscopy. POC quality had strong effects on nitrogen processing. Leaf treatments had much higher nitrate retention, TDN retention and denitrification rates than the wood and control treatments and red maple leaf burial resulted in higher nitrate and TDN retention rates than burial of red oak leaves. Leaf, but not wood, burial drove pore water to severe hypoxia and leaf treatments had higher DOC production and different DOC chemical composition than the wood and control treatments. We think that POC quality affected nitrogen processing in the sediments by influencing the quantity and quality of DOC and redox conditions. Our results suggest that the type of organic carbon inputs can affect the rates of nitrogen transformation in stream ecosystems.

Influence of a Heterocyclic Nitrogen-Donor Group on the Coordination of Trivalent Actinides and Lanthanides by Aminopolycarboxylate Complexants

DOE Office of Scientific and Technical Information (OSTI.GOV)

Grimes, Travis S.; Heathman, Colt R.; Jansone-Popova, Santa

Here, the novel metal chelator N-2-(pyridylmethyl)diethylenetriamine- N,N',N",N"-tetraacetic acid (DTTA-PyM) was designed to replace a single oxygen-donor acetate group of the well-known aminopolycarboxylate complexant diethylenetriamine- N,N,N',N",N"-pentaacetic acid (DTPA) with a nitrogen-donor 2-pyridylmethyl. Potentiometric, spectroscopic, computational, and radioisotope distribution methods show distinct differences for the 4f and 5f coordination environments and enhanced actinide binding due to the nitrogen-bearing heterocyclic moiety. The Am 3+, Cm 3+, and Ln 3+ complexation studies for DTTA-PyM reveal an enhanced preference, relative to DTPA, for trivalent actinide binding. Fluorescence studies indicate no changes to the octadentate coordination of trivalent curium, while evidence of heptadentate complexation of trivalentmore » europium is found in mixtures containing EuHL (aq) complexes at the same aqueous acidity. The denticity change observed for Eu 3+ suggests that complex protonation occurs on the pyridyl nitrogen. Formation of the CmHL (aq) complex is likely due to the protonation of an available carboxylate group because the carbonyl oxygen can maintain octadentate coordination through a rotation. The observed suppressed protonation of the pyridyl nitrogen in the curium complexes may be attributed to stronger trivalent actinide binding by DTTA-PyM. Density functional theory calculations indicate that added stabilization of the actinide complexes with DTTA-PyM may originate from π-back-bonding interactions between singly occupied 5f orbitals of Am 3+ and the pyridyl nitrogen. The differences between the stabilities of trivalent actinide chelates (Am 3+, Cm 3+) and trivalent lanthanide chelates (La 3+–Lu 3+) are observed in liquid–liquid extraction systems, yielding unprecedented 4f/5f differentiation when using DTTA-PyM as an aqueous holdback reagent. In addition, the enhanced nitrogen-donor softness of the new DTTA-PyM chelator was perturbed by adding a fluorine onto the pyridine group. The comparative characterization of N-(3-fluoro-2-pyridylmethyl)diethylenetriamine- N,N',N",N"-tetraacetic acid (DTTA-3-F-PyM) showed subdued 4 f/5 f differentiation due to the presence of this electron-withdrawing group.« less

Reducing equifinality using isotopes in a process-based stream nitrogen model highlights the flux of algal nitrogen from agricultural streams

NASA Astrophysics Data System (ADS)

Ford, William I.; Fox, James F.; Pollock, Erik

2017-08-01

The fate of bioavailable nitrogen species transported through agricultural landscapes remains highly uncertain given complexities of measuring fluxes impacting the fluvial N cycle. We present and test a new numerical model named Technology for Removable Annual Nitrogen in Streams For Ecosystem Restoration (TRANSFER), which aims to reduce model uncertainty due to erroneous parameterization, i.e., equifinality, in stream nitrogen cycle assessment and quantify the significance of transient and permanent removal pathways. TRANSFER couples nitrogen elemental and stable isotope mass-balance equations with existing hydrologic, hydraulic, sediment transport, algal biomass, and sediment organic matter mass-balance subroutines and a robust GLUE-like uncertainty analysis. We test the model in an agriculturally impacted, third-order stream reach located in the Bluegrass Region of Central Kentucky. Results of the multiobjective model evaluation for the model application highlight the ability of sediment nitrogen fingerprints including elemental concentrations and stable N isotope signatures to reduce equifinality of the stream N model. Advancements in the numerical simulations allow for illumination of the significance of algal sloughing fluxes for the first time in relation to denitrification. Broadly, model estimates suggest that denitrification is slightly greater than algal N sloughing (10.7% and 6.3% of dissolved N load on average), highlighting the potential for overestimation of denitrification by 37%. We highlight the significance of the transient N pool given the potential for the N store to be regenerated to the water column in downstream reaches, leading to harmful and nuisance algal bloom development.

Biofilter for removal of nitrogen oxides from contaminated gases under aerobic conditions

DOEpatents

Apel, William A.

1998-01-01

A biofilter for reducing concentrations of gaseous nitrogen oxides in a polluted gas comprises a porous organic filter bed medium disposed in a housing, the filter bed medium including a mixed culture of naturally occurring denitrifying bacteria for converting the nitrogen oxides to nitrogen gas, carbon dioxide, and water. A method of reducing concentrations of nitrogen oxides in polluted gas comprises conducting the polluted gas through the biofilter so that the denitrifying bacteria can degrade the nitrogen oxides. A preferred filter medium is wood compost, however composts of other organic materials are functional. Regulation of pH, moisture content, exogenous carbon sources, and temperature are described.

An introduced predator alters Aleutian Island plant communities by thwarting nutrient subsidies

USGS Publications Warehouse

Maron, J.L.; Estes, J.A.; Croll, D.A.; Danner, E.M.; Elmendorf, S.C.; Buckelew, S.L.

2006-01-01

The ramifying effects of top predators on food webs traditionally have been studied within the framework of trophic cascades. Trophic cascades are compelling because they embody powerful indirect effects of predators on primary production. Although less studied, indirect effects of predators may occur via routes that are not exclusively trophic. We quantified how the introduction of foxes onto the Aleutian Islands transformed plant communities by reducing abundant seabird populations, thereby disrupting nutrient subsidies vectored by seabirds from sea to land. We compared soil and plant fertility, plant biomass and community composition, and stable isotopes of nitrogen in soil, plants, and other organisms on nine fox-infested and nine historically fox-free islands across the Aleutians. Additionally, we experimentally augmented nutrients on a fox-infested island to test whether differences in plant productivity and composition between fox-infested and fox-free islands could have arisen from differences in nutrient inputs between island types. Islands with historical fox infestations had soils low in phosphorus and nitrogen and plants low in tissue nitrogen. Soils, plants, slugs, flies, spiders, and bird droppings on these islands had low d15N values indicating that these organisms obtained nitrogen from internally derived sources. In contrast, soils, plants, and higher trophic level organisms on fox-free islands had elevated d15N signatures indicating that they utilized nutrients derived from the marine environment. Furthermore, soil phosphorus (but not nitrogen) and plant tissue nitrogen were higher on fox-free than fox-infested islands. Nutrient subsidized fox-free islands supported lush, high biomass plant communities dominated by graminoids. Fox-infested islands were less graminoid dominated and had higher cover and biomass of low-lying forbs and dwarf shrubs. While d15N profiles of soils and plants and graminoid biomass varied with island size and distance from shore, after accounting for these effects differences between fox-infested and fox-free islands still existed. Fertilization over four years caused a 24-fold increase in graminoid biomass and a shift toward a more graminoid dominated plant community typical of fox-free islands. These results indicate that apex predators can influence plant productivity and composition through complex interaction web pathways involving both top-down forcing and bottom-up nutrient exchanges across systems. ?? 2006 by the Ecological Society of America.

Evaluation of anthropogenic influences on the Luhuitou fringing reef via spatial and temporal analyses (from isotopic values)

NASA Astrophysics Data System (ADS)

Cao, D.; Cao, W.; Yu, K.; Wu, G.; Yang, J.; Su, X.; Wang, F.

2017-05-01

Coral reefs have suffered remarkable declines worldwide. Nutrient overenrichment is considered to be one of the primary local causes. The Luhuitou fringing reef in southern China is a well-known tourist destination that is subject to enormous coastal renovation. The mean δ13C, δ15N value, and carbon over nitrogen ratio (C/N) of particulate organic matter were -21.56 ± 1.94‰, 7.04 ± 3.81‰, and 5.81 ± 1.86, respectively, suggesting mixed sources of carbon and nitrogen. The IsoError calculations suggested that marine phytoplankton and marine benthic algae dominated the majority of carbon sources, while anthropogenic and terrestrial organic nitrogen dominated the nitrogen sources. A tendency toward greater terrestrial detritus and anthropogenic-derived discharges was found during dry seasons and greater marine-derived organic matter during wet seasons. These results demonstrated the existence of anthropogenic influences and high dissolved inorganic nitrogen concentrations and C/N ratios. Anthropogenic nutrient discharge moderated nitrogen limitation, whereas phosphorus became more important to the reef ecosystem. Despite the marine carbon sources dominated, freshwater and terrestrial-derived organic carbon sources were also very important. Meanwhile, anthropogenic and terrestrial organic nitrogen sources were dominant. Therefore, pollution from more extensive region and anthropogenic activities from riverine sewage discharges adjacent to reefs should be focused to effectively reduce human-derived nutrients on reefs.

Molecular composition and bioavailability of dissolved organic nitrogen in a lake flow-influenced river in south Florida, USA

USDA-ARS?s Scientific Manuscript database

Dissolved organic nitrogen (DON) represents a large percentage of the total nitrogen in rivers and estuaries, and can contribute to coastal eutrophication and hypoxia. This study reports on the composition and bioavailability of DON along the Caloosahatchee River (Florida), a heavily managed system ...

Quantifying the production of dissolved organic nitrogen in headwater streams using 15N tracer additions

Treesearch

Laura T. Johnson; Jennifer L. Tank; Robert O. Hall; Patrick J. Mullholland; Stephen K. Hamilton; H. Maurice Valett; Jackson R. Webster; Melody J. Bernot; William H. McDowell; Bruce J. Peterson; Suzanne M. Thomas

2013-01-01

Most nitrogen (N) assimilation in lake and marine ecosystems is often subsequently released via autochthonous dissolved organic nitrogen (DON) production, but autochthonous DON production has yet to be quantified in flowing waters. We measured in-stream DON production following 24 h 15N-nitrate (NO3-...

Reactions and mass spectra of complex particles using Aerosol CIMS

NASA Astrophysics Data System (ADS)

Hearn, John D.; Smith, Geoffrey D.

2006-12-01

Aerosol chemical ionization mass spectrometry (CIMS) is used both on- and off-line for the analysis of complex laboratory-generated and ambient particles. One of the primary advantages of Aerosol CIMS is the low degree of ion fragmentation, making this technique well suited for investigating the reactivity of complex particles. To demonstrate the usefulness of this "soft" ionization, particles generated from meat cooking were reacted with ozone and the composition was monitored as a function of reaction time. Two distinct kinetic regimes were observed with most of the oleic acid in these particles reacting quickly but with 30% appearing to be trapped in the complex mixture. Additionally, detection limits are measured to be sufficiently low (100-200 ng/m3) to detect some of the more abundant constituents in ambient particles, including sulfate, which is measured in real-time at 1.2 [mu]g/m3. To better characterize complex aerosols from a variety of sources, a novel off-line collection method was also developed in which non-volatile and semi-volatile organics are desorbed from particles and concentrated in a cold U-tube. Desorption from the U-tube followed by analysis with Aerosol CIMS revealed significant amounts of nicotine in cigarette smoke and levoglucosan in oak and pine smoke, suggesting that this may be a useful technique for monitoring particle tracer species. Additionally, secondary organic aerosol formed from the reaction of ozone with R-limonene and volatile organics from orange peel were analyzed off-line showing large molecular weight products (m/z > 300 amu) that may indicate the formation of oligomers. Finally, mass spectra of ambient aerosol collected offline reveal a complex mixture of what appears to be highly processed organics, some of which may contain nitrogen.

Long-Term Simulated Atmospheric Nitrogen Deposition Alters ...

EPA Pesticide Factsheets

Atmospheric nitrogen deposition has been suggested to increase forest carbon sequestration across much of the Northern Hemisphere; slower organic matter decomposition could contribute to this increase. At four sugar maple (Acer saccharum)-dominated northern hardwood forests, we previously observed that 10 years of chronic simulated nitrogen deposition (30 kg N ha-1 yr-1) increased soil organic carbon. Over three years at these sites, we investigated the effects of nitrogen additions on decomposition of two substrates with documented differences in biochemistry: leaf litter (more labile) and fine roots (more recalcitrant). Further, we combined decomposition rates with annual leaf and fine root litter production to estimate how nitrogen additions altered the accumulation of soil organic matter. Nitrogen additions marginally stimulated early-stage decomposition of leaf litter, a substrate with little acid-insoluble material (e.g., lignin). In contrast, nitrogen additions inhibited the late stage decomposition of fine roots, a substrate with high amount of acid insoluble material and a change consistent with observed decreases in lignin-degrading enzyme activities with nitrogen additions at these sites. At the ecosystem scale, the slower fine root decomposition led to additional root mass retention (g m-2), which explained 5, 48, and 52 % of previously-documented soil carbon accumulation due to nitrogen additions. Our results demonstrated that nitrogen deposition ha

Linking Annual N2O Emission in Organic Soils to Mineral Nitrogen Input as Estimated by Heterotrophic Respiration and Soil C/N Ratio

PubMed Central

Mu, Zhijian; Huang, Aiying; Ni, Jiupai; Xie, Deti

2014-01-01

Organic soils are an important source of N2O, but global estimates of these fluxes remain uncertain because measurements are sparse. We tested the hypothesis that N2O fluxes can be predicted from estimates of mineral nitrogen input, calculated from readily-available measurements of CO2 flux and soil C/N ratio. From studies of organic soils throughout the world, we compiled a data set of annual CO2 and N2O fluxes which were measured concurrently. The input of soil mineral nitrogen in these studies was estimated from applied fertilizer nitrogen and organic nitrogen mineralization. The latter was calculated by dividing the rate of soil heterotrophic respiration by soil C/N ratio. This index of mineral nitrogen input explained up to 69% of the overall variability of N2O fluxes, whereas CO2 flux or soil C/N ratio alone explained only 49% and 36% of the variability, respectively. Including water table level in the model, along with mineral nitrogen input, further improved the model with the explanatory proportion of variability in N2O flux increasing to 75%. Unlike grassland or cropland soils, forest soils were evidently nitrogen-limited, so water table level had no significant effect on N2O flux. Our proposed approach, which uses the product of soil-derived CO2 flux and the inverse of soil C/N ratio as a proxy for nitrogen mineralization, shows promise for estimating regional or global N2O fluxes from organic soils, although some further enhancements may be warranted. PMID:24798347

Regulation of nitrogen metabolism by GATA zinc finger transcription factors in Yarrowia lipolytica

DOE PAGES

Pomraning, Kyle R.; Bredeweg, Erin L.; Baker, Scott E.; ...

2017-02-15

Here, fungi accumulate lipids in a manner dependent on the quantity and quality of the nitrogen source on which they are growing. In the oleaginous yeast Yarrowia lipolytica, growth on a complex source of nitrogen enables rapid growth and limited accumulation of neutral lipids, while growth on a simple nitrogen source promotes lipid accumulation in large lipid droplets. Here we examined the roles of nitrogen catabolite repression and its regulation by GATA zinc finger transcription factors on lipid metabolism in Y. lipolytica. Deletion of the GATA transcription factor genes gzf3 and gzf2 resulted in nitrogen source-specific growth defects and greatermore » accumulation of lipids when the cells were growing on a simple nitrogen source. Deletion of gzf1, which is most similar to activators of genes repressed by nitrogen catabolite repression in filamentous ascomycetes, did not affect growth on the nitrogen sources tested. We examined gene expression of wild-type and GATA transcription factor mutants on simple and complex nitrogen sources and found that expression of enzymes involved in malate metabolism, beta-oxidation, and ammonia utilization are strongly upregulated on a simple nitrogen source. Deletion of gzf3 results in overexpression of genes with GATAA sites in their promoters, suggesting that it acts as a repressor, while gzf2 is required for expression of ammonia utilization genes but does not grossly affect the transcription level of genes predicted to be controlled by nitrogen catabolite repression. Both GATA transcription factor mutants exhibit decreased expression of genes controlled by carbon catabolite repression via the repressor mig1, including genes for beta-oxidation, highlighting the complex interplay between regulation of carbon, nitrogen, and lipid metabolism.« less

Regulation of nitrogen metabolism by GATA zinc finger transcription factors in Yarrowia lipolytica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pomraning, Kyle R.; Bredeweg, Erin L.; Baker, Scott E.

Here, fungi accumulate lipids in a manner dependent on the quantity and quality of the nitrogen source on which they are growing. In the oleaginous yeast Yarrowia lipolytica, growth on a complex source of nitrogen enables rapid growth and limited accumulation of neutral lipids, while growth on a simple nitrogen source promotes lipid accumulation in large lipid droplets. Here we examined the roles of nitrogen catabolite repression and its regulation by GATA zinc finger transcription factors on lipid metabolism in Y. lipolytica. Deletion of the GATA transcription factor genes gzf3 and gzf2 resulted in nitrogen source-specific growth defects and greatermore » accumulation of lipids when the cells were growing on a simple nitrogen source. Deletion of gzf1, which is most similar to activators of genes repressed by nitrogen catabolite repression in filamentous ascomycetes, did not affect growth on the nitrogen sources tested. We examined gene expression of wild-type and GATA transcription factor mutants on simple and complex nitrogen sources and found that expression of enzymes involved in malate metabolism, beta-oxidation, and ammonia utilization are strongly upregulated on a simple nitrogen source. Deletion of gzf3 results in overexpression of genes with GATAA sites in their promoters, suggesting that it acts as a repressor, while gzf2 is required for expression of ammonia utilization genes but does not grossly affect the transcription level of genes predicted to be controlled by nitrogen catabolite repression. Both GATA transcription factor mutants exhibit decreased expression of genes controlled by carbon catabolite repression via the repressor mig1, including genes for beta-oxidation, highlighting the complex interplay between regulation of carbon, nitrogen, and lipid metabolism.« less

Effects of Organic and Inorganic Nitrogen on the Growth and Production of Domoic Acid by Pseudo-nitzschia multiseries and P. australis (Bacillariophyceae) in Culture.

PubMed

Martin-Jézéquel, Véronique; Calu, Guillaume; Candela, Leo; Amzil, Zouher; Jauffrais, Thierry; Séchet, Véronique; Weigel, Pierre

2015-11-26

Over the last century, human activities have altered the global nitrogen cycle, and anthropogenic inputs of both inorganic and organic nitrogen species have increased around the world, causing significant changes to the functioning of aquatic ecosystems. The increasing frequency of Pseudo-nitzschia spp. in estuarine and coastal waters reinforces the need to understand better the environmental control of its growth and domoic acid (DA) production. Here, we document Pseudo-nitzschia spp. growth and toxicity on a large set of inorganic and organic nitrogen (nitrate, ammonium, urea, glutamate, glutamine, arginine and taurine). Our study focused on two species isolated from European coastal waters: P. multiseries CCL70 and P. australis PNC1. The nitrogen sources induced broad differences between the two species with respect to growth rate, biomass and cellular DA, but no specific variation could be attributed to any of the inorganic or organic nitrogen substrates. Enrichment with ammonium resulted in an enhanced growth rate and cell yield, whereas glutamate did not support the growth of P. multiseries. Arginine, glutamine and taurine enabled good growth of P. australis, but without toxin production. The highest DA content was produced when P. multiseries grew with urea and P. australis grew with glutamate. For both species, growth rate was not correlated with DA content but more toxin was produced when the nitrogen source could not sustain a high biomass. A significant negative correlation was found between cell biomass and DA content in P. australis. This study shows that Pseudo-nitzschia can readily utilize organic nitrogen in the form of amino acids, and confirms that both inorganic and organic nitrogen affect growth and DA production. Our results contribute to our understanding of the ecophysiology of Pseudo-nitzschia spp. and may help to predict toxic events in the natural environment.

Effects of Organic and Inorganic Nitrogen on the Growth and Production of Domoic Acid by Pseudo-nitzschia multiseries and P. australis (Bacillariophyceae) in Culture

PubMed Central

Martin-Jézéquel, Véronique; Calu, Guillaume; Candela, Leo; Amzil, Zouher; Jauffrais, Thierry; Séchet, Véronique; Weigel, Pierre

2015-01-01

Over the last century, human activities have altered the global nitrogen cycle, and anthropogenic inputs of both inorganic and organic nitrogen species have increased around the world, causing significant changes to the functioning of aquatic ecosystems. The increasing frequency of Pseudo-nitzschia spp. in estuarine and coastal waters reinforces the need to understand better the environmental control of its growth and domoic acid (DA) production. Here, we document Pseudo-nitzschia spp. growth and toxicity on a large set of inorganic and organic nitrogen (nitrate, ammonium, urea, glutamate, glutamine, arginine and taurine). Our study focused on two species isolated from European coastal waters: P. multiseries CCL70 and P. australis PNC1. The nitrogen sources induced broad differences between the two species with respect to growth rate, biomass and cellular DA, but no specific variation could be attributed to any of the inorganic or organic nitrogen substrates. Enrichment with ammonium resulted in an enhanced growth rate and cell yield, whereas glutamate did not support the growth of P. multiseries. Arginine, glutamine and taurine enabled good growth of P. australis, but without toxin production. The highest DA content was produced when P. multiseries grew with urea and P. australis grew with glutamate. For both species, growth rate was not correlated with DA content but more toxin was produced when the nitrogen source could not sustain a high biomass. A significant negative correlation was found between cell biomass and DA content in P. australis. This study shows that Pseudo-nitzschia can readily utilize organic nitrogen in the form of amino acids, and confirms that both inorganic and organic nitrogen affect growth and DA production. Our results contribute to our understanding of the ecophysiology of Pseudo-nitzschia spp. and may help to predict toxic events in the natural environment. PMID:26703627

Chemistry between the stars.

PubMed

Irvine, W M

1987-01-01

Life--as we know it--is a chemical process, based on water and carbon compounds. Complex organic molecules are made primarily from the biogenic elements--carbon, hydrogen, nitrogen, oxygen, phosphorus and sulfur--that formed deep within massive ancient stars. How did these elements travel from their stellar birthplaces across time and space to make up the life-form that is reading these words? In this article, we'll take a look at the chemical processes that set the stage for the origin of life.

Organic Nitrogen in Atmospheric Drops and Particles: Concentrations, (Limited) Speciation, and Chemical Transformations

NASA Astrophysics Data System (ADS)

Anastasio, C.; Zhang, Q.

2003-12-01

While quite a bit is known of the concentrations, speciation, and chemistry of inorganic forms of nitrogen in the atmosphere, the same cannot be said for organic forms. Despite this, there is growing evidence that organic N (ON) is ubiquitous in the atmosphere, especially in atmospheric condensed phases such as fog/cloud drops and aerosol particles. Although the major compounds that make up organic N are generally unknown, as are the sources of these compounds, it is clear that there are significant fluxes of ON between the atmosphere and ecosystems. It also appears that organic N can have significant effects in both spheres. The goal of our recent work in this area has been to better describe the atmospheric component of the biogeochemistry of organic nitrogen. Based on particle, gas, and fogwater samples from Northern California we have made three major findings: 1) Organic N represents a significant component, approximately 20%, of the total atmospheric N loading in these samples. This is broadly consistent with studies from other locations. 2) Amino compounds, primarily as combined amino acids, account for approximately 20% of the measured ON in our condensed phase samples. Given the properties of amino acids, these compounds could significantly affect the chemical and physical properties of atmospheric particles. 3) Organic nitrogen in atmospheric particles and drops is transformed to inorganic forms - primarily ammonium, nitrate, and nitrogen oxides (NOx) - during exposure to sunlight and/or ozone. These chemical reactions likely increase the bioavailability of the condensed phase nitrogen pool and enhance its biological effects after deposition to ecosystems.

The carbon bonus of organic nitrogen enhances nitrogen use efficiency of plants

DOE PAGES

Franklin, Oskar; Cambui, Camila Aguetoni; Gruffman, Linda; ...

2016-06-29

The importance of organic nitrogen (N) for plant nutrition and productivity is increasingly being recognized. Here we show that it is not only the availability in the soil that matters, but also the effects on plant growth. The chemical form of N taken up, whether inorganic (such as nitrate) or organic (such as amino acids), may significantly influence plant shoot and root growth, and nitrogen use efficiency (NUE). We analysed these effects by synthesizing results from multiple laboratory experiments on small seedlings (Arabidopsis, poplar, pine and spruce) based on a tractable plant growth model. A key point is that themore » carbon cost of assimilating organic N into proteins is lower than that of inorganic N, mainly because of its carbon content. This carbon bonus makes it more beneficial for plants to take up organic than inorganic N, even when its availability to the roots is much lower – up to 70% lower for Arabidopsis seedlings. At equal growth rate, root:shoot ratio was up to three times higher and nitrogen productivity up to 20% higher for organic than inorganic N, which both are factors that may contribute to higher NUE in crop production.« less

The carbon bonus of organic nitrogen enhances nitrogen use efficiency of plants

DOE Office of Scientific and Technical Information (OSTI.GOV)

Franklin, Oskar; Cambui, Camila Aguetoni; Gruffman, Linda

The importance of organic nitrogen (N) for plant nutrition and productivity is increasingly being recognized. Here we show that it is not only the availability in the soil that matters, but also the effects on plant growth. The chemical form of N taken up, whether inorganic (such as nitrate) or organic (such as amino acids), may significantly influence plant shoot and root growth, and nitrogen use efficiency (NUE). We analysed these effects by synthesizing results from multiple laboratory experiments on small seedlings (Arabidopsis, poplar, pine and spruce) based on a tractable plant growth model. A key point is that themore » carbon cost of assimilating organic N into proteins is lower than that of inorganic N, mainly because of its carbon content. This carbon bonus makes it more beneficial for plants to take up organic than inorganic N, even when its availability to the roots is much lower – up to 70% lower for Arabidopsis seedlings. At equal growth rate, root:shoot ratio was up to three times higher and nitrogen productivity up to 20% higher for organic than inorganic N, which both are factors that may contribute to higher NUE in crop production.« less

The carbon bonus of organic nitrogen enhances nitrogen use efficiency of plants

PubMed Central

Cambui, Camila Aguetoni; Gruffman, Linda; Palmroth, Sari; Oren, Ram; Näsholm, Torgny

2016-01-01

Abstract The importance of organic nitrogen (N) for plant nutrition and productivity is increasingly being recognized. Here we show that it is not only the availability in the soil that matters, but also the effects on plant growth. The chemical form of N taken up, whether inorganic (such as nitrate) or organic (such as amino acids), may significantly influence plant shoot and root growth, and nitrogen use efficiency (NUE). We analysed these effects by synthesizing results from multiple laboratory experiments on small seedlings (Arabidopsis, poplar, pine and spruce) based on a tractable plant growth model. A key point is that the carbon cost of assimilating organic N into proteins is lower than that of inorganic N, mainly because of its carbon content. This carbon bonus makes it more beneficial for plants to take up organic than inorganic N, even when its availability to the roots is much lower – up to 70% lower for Arabidopsis seedlings. At equal growth rate, root:shoot ratio was up to three times higher and nitrogen productivity up to 20% higher for organic than inorganic N, which both are factors that may contribute to higher NUE in crop production. PMID:27241731

Uptake of organic nitrogen by plants

Treesearch

Torgny Nasholm; Knut Kielland; Ulrika Ganeteg

2009-01-01

Languishing for many years in the shadow of plant inorganic nitrogen (N) nutrition research, studies of organic N uptake have attracted increased attention during the last decade. The capacity of plants to acquire organic N, demonstrated in laboratory and field settings, has thereby been well established. Even so, the ecological significance of organic N uptake for...

SOIL NITROGEN TRANSFORMATIONS AND ROLE OF LIGHT FRACTION ORGANIC MATTER IN FOREST SOILS

EPA Science Inventory

Depletion of soil organic matter through cultivation may alter substrate availability for microbes, altering the dynamic balance between nitrogen (N) immobilization and mineralization. Soil light fraction (LF) organic matter is an active pool that decreases upon cultivation, and...

Organics in the atmosphere: From air pollution to biogeochemical cycles and climate (Vilhelm Bjerknes Medal)

NASA Astrophysics Data System (ADS)

Kanakidou, Maria

2016-04-01

Organics are key players in the biosphere-atmosphere-climate interactions. They have also a significant anthropogenic component due to primary emissions or interactions with pollution. The organic pool in the atmosphere is a complex mixture of compounds of variable reactivity and properties, variable content in C, H, O, N and other elements depending on their origin and their history in the atmosphere. Multiphase atmospheric chemistry is known to produce organic acids with high oxygen content, like oxalic acid. This water soluble organic bi-acid is used as indicator for cloud processing and can form complexes with atmospheric Iron, affecting Iron solubility. Organics are also carriers of other nutrients like nitrogen and phosphorus. They also interact with solar radiation and with atmospheric water impacting on climate. In line with this vision for the role of organics in the atmosphere, we present results from a global 3-dimensional chemistry-transport model on the role of gaseous and particulate organics in atmospheric chemistry, accounting for multiphase chemistry and aerosol ageing in the atmosphere as well as nutrients emissions, atmospheric transport and deposition. Historical simulations and projections highlight the human impact on air quality and atmospheric deposition to the oceans. The results are put in the context of climate change. Uncertainties and implications of our findings for biogeochemical and climate modeling are discussed.

Comparison of biochar, zeolite and their mixture amendment for aiding organic matter transformation and nitrogen conservation during pig manure composting.

PubMed

Wang, Quan; Awasthi, Mukesh Kumar; Ren, Xiuna; Zhao, Junchao; Li, Ronghua; Wang, Zhen; Chen, Hongyu; Wang, Meijing; Zhang, Zengqiang

2017-12-01

The aim of this work was to compare the impact of biochar, zeolite and their mixture on nitrogen conservation and organic matter transformation during pig manure (PM) composting. Four treatments were set-up from PM mixed with wheat straw and then applied 10% biochar (B), 10% zeolite (Z) and 10% biochar+10% zeolite (B+Z) into composting mixtures (dry weight basis), while treatment without additives applied used as control. Results indicated that adding B, Z and B+Z could obviously (p<0.05) improve the organic matter degradation and decrease the nitrogen loss. And combined addition of B and Z further promoted the organic matter humification and reduced the heavy metals mobility. Meanwhile the highest mitigation of ammonia (63.40%) and nitrogen dioxide (78.13%) emissions was observed in B+Z added treatment. Comparison of organic matter transformation, nitrogen conservation and compost quality indicated that the combined use of biochar and zeolite could be more useful for PM composting. Copyright © 2017 Elsevier Ltd. All rights reserved.

Nitrogen Inputs via Nitrogen Fixation in Northern Plants and Soils

NASA Astrophysics Data System (ADS)

Thorp, N. R.; Wieder, R. K.; Vile, M. A.

2015-12-01

Dominated by cold and often acidic water logged environments, mineralization of organic matter is slow in the majority of northern ecosystems. Measures of extractable ammonium and nitrate are generally low and can be undetectable in peat pore waters. Despite this apparent nitrogen limitation, many of these environments produce deep deposits of soil organic matter. Biological nitrogen fixation carried out by autotrophic and heterotrophic diazotrophs associated with cryptograms provides the majority of known nitrogen inputs in these northern ecosystems. Nitrogen fixation was assessed in a variety of northern soils within rhizospheres of dominant plant communities. We investigated the availability of this newly fixed nitrogen to the vascular plant community in nitrogen limited northern plant communities. We tracked nitrogen flow from 15N2 gas fixed in Sphagnum mosses into tissues of two native vascular plant species, boreal cranberry (Vaccinium oxycoccus) and black spruce (Picea mariana). 15N-labeled Sphagnum microcosms were grown within variable mesh size exclusion/inclusion fabrics in a nitrogen addition experiment in situ in order to investigate the role of mycorrhizal fungi in the uptake of newly fixed nitrogen. Up to 24% of daily fixed 15N label was transferred to vascular plant tissues during 2 months. Nitrogen addition resulted in decreased N2 fixation rates; however, with higher nitrogen availability there was a higher rate of 15N label uptake into the vascular plants, likely the result of increased production of dissolved organic nitrogen. Reliance on mycorrhizal networks for nitrogen acquisition was indicated by nitrogen isotope fractionation patterns. Moreover, N2 fixation activities in mosses were stimulated when vascular plants were grown in moss microcosms versus "moss only" treatments. Results indicate that bog vascular plants may derive considerable nitrogen from atmospheric N2 biologically fixed within Sphagnum mosses. This work demonstrates that diazotroph-mediated 15N labeling is a viable technique for tracking nitrogen flow without altering form and concentration of native nitrogen pools in a nitrogen limited ecosystem.

Contrasted nitrogen utilization in annual C 3 grass and legume crops: Physiological explorations and ecological considerations

NASA Astrophysics Data System (ADS)

Del Pozo, Alejandro; Garnier, Eric; Aronson, James

2000-01-01

Although it is well known that legumes have unusually high levels of nitrogen in both reproductive and vegetative organs, the physiological implications of this pattern have been poorly assessed. We conducted a literature survey and used data from two (unpublished) experiments on annual legumes and C 3 grasses in order to test whether these high nitrogen concentrations in legumes are correlated to high rates of carbon gain. Three different temporal/spatial scales were considered: full growing season/stand, days to month/whole plant and seconds/leaf. At the stand level, and for plants grown under both extratropical and tropical settings, biomass per unit organic-nitrogen was lower in legume than in grass crops. At a shorter time scale, the relative growth rate per unit plant nitrogen (`nitrogen productivity') was lower in faba bean ( Vicia faba var. minor cv. Tina) than in wheat ( Triticum aestivum cv. Alexandria), and this was confirmed in a comparison of two wild, circum-Mediterranean annuals - Medicago minima, a legume, and Bromus madritensis, a grass. Finally, at the leaf level, a synthesis of published data comparing soybean ( Glycine max) and rice ( Oryza sativa) on the one hand, and our own data on faba bean and wheat on the other hand, demonstrates that the photosynthetic rate per unit leaf nitrogen (the photosynthetic nitrogen use efficiency) is consistently lower in legumes than in grasses. These results demonstrate that, regardless of the scale considered and although the organic-nitrogen concentration in vegetative organs of legumes is higher than in grasses, this does not lead to higher rates of carbon gain in the former. Various physiological factors affecting the efficiency of nitrogen utilization at the three time scales considered are discussed. The suggestion is made that the ecological significance of the high nitrogen concentration in legumes may be related to a high nitrogen demand for high quality seed production at a time when nitrogen fixation is shut off rather than to a high production potential.

Determination of nitrogen balance in agroecosystems.

PubMed

Sainju, Upendra M

2017-01-01

Nitrogen balance in agroecosystems provides a quantitative framework of N inputs and outputs and retention in the soil that examines the sustainability of agricultural productivity and soil and environmental quality. Nitrogen inputs include N additions from manures and fertilizers, atmospheric depositions including wet and dry depositions, irrigation water, and biological N fixation. Nitrogen outputs include N removal in crop grain and biomass and N losses through leaching, denitrification, volatilization, surface runoff, erosion, gas emissions, and plant senescence. Nitrogen balance, which is the difference between N inputs and outputs, can be reflected in changes in soil total (organic + inorganic) N during the course of the experiment duration due to N immobilization and mineralization. While increased soil N retention and mineralization can enhance crop yields and decrease N fertilization rate, reduced N losses through N leaching and gas emissions (primarily NH 4 and NO x emissions, out of which N 2 O is a potent greenhouse gas) can improve water and air quality. •This paper discusses measurements and estimations (for non-measurable parameters due to complexity) of all inputs and outputs of N as well as changes in soil N storage during the course of the experiment to calculate N balance.•The method shows N flows, retention in the soil, and losses to the environment from agroecosystems.•The method can be used to measure agroecosystem performance and soil and environmental quality from agricultural practices.

Dose-dependent intracellular reactive oxygen and nitrogen species (ROS/RNS) production from particulate matter exposure: comparison to oxidative potential and chemical composition

NASA Astrophysics Data System (ADS)

Tuet, Wing Y.; Fok, Shierly; Verma, Vishal; Tagle Rodriguez, Marlen S.; Grosberg, Anna; Champion, Julie A.; Ng, Nga L.

2016-11-01

Elevated particulate matter (PM) concentrations have been associated with cardiopulmonary risks. In this study, alveolar macrophages and ventricular myocytes were exposed to PM extracts from 104 ambient filters collected in multiple rural and urban sites in the greater Atlanta area. PM-induced reactive oxygen/nitrogen species (ROS/RNS) were measured to investigate the effect of chemical composition and determine whether chemical assays are representative of cellular responses. For summer samples, the area under the ROS/RNS dose-response curve per volume of air (AUCvolume) was significantly correlated with dithiothreitol (DTT) activity, water-soluble organic carbon (WSOC), brown carbon, titanium, and iron, while a relatively flat response was observed for winter samples. EC50 was also correlated with max response for all filters investigated, which suggests that certain PM constituents may be involved in cellular protective pathways. Although few metal correlations were observed, exposure to laboratory-prepared metal solutions induced ROS/RNS production, indicating that a lack of correlation does not necessarily translate to a lack of response. Collectively, these results suggest that complex interactions may occur between PM species. Furthermore, the strong correlation between organic species and ROS/RNS response highlights a need to understand the contribution of organic aerosols, especially photochemically driven secondary organic aerosols (SOA), to PM-induced health effects.

Meteorites, Organics and Fischer-Tropsch Type Reaction: Production and Destruction

NASA Technical Reports Server (NTRS)

Johnson, Natasha M.; Burton, A. S.; Nurth, J. A., III

2011-01-01

There has been an ongoing debate about the relative importance about the various chemical reactions that fonned organics in the early solar system. One proposed method that has long been recognized as a potential source of organics is Fischer-Tropsch type (FTT) synthesis. This process is commonly used in industry to produce fuels (i.e., complex hydrocarbons) by catalytic hydrogenation of carbon monoxide. Hill and Nuth were the first to publish results of FTT experiments that also included Haber-Bosch (HB) processes (hydrogenation of nitrogen. Their findings included the production of nitrilebearing compounds as well as trace amounts of methyl amine. Previous experience with these reactions revealed that the organic coating deposited on the grains is also an efficient catalyst and that the coating is composed of insoluble organic matter (10M) and could be reminiscent of the organic matrix found in some meteorites. This current set of FTT-styled experiments tracks the evolution of a set of organics, amino acids, in detail.

Our Galactic Neighbor Hosts Complex Organic Molecules

NASA Astrophysics Data System (ADS)

Hensley, Kerry

2018-03-01

For the first time, data from the Atacama Large Millimeter/submillimeter Array (ALMA) reveal the presence of methyl formate and dimethyl ether in a star-forming region outside our galaxy. This discovery has important implications for the formation and survival of complex organic compounds importantfor the formation of life in low-metallicity galaxies bothyoung and old.No Simple Picture of Complex Molecule FormationALMA, pictured here with the Magellanic Clouds above, has observed organic molecules in our Milky Way Galaxy and beyond. [ESO/C. Malin]Complex organic molecules (those with at least six atoms, one or more of which must be carbon) are the precursors to the building blocks of life. Knowing how and where complex organic molecules can form is a key part of understanding how life came to be on Earth and how it might arise elsewhere in the universe. From exoplanet atmospheres to interstellar space, complex organic molecules are ubiquitous in the Milky Way.In our galaxy, complex organic molecules are often found in the intense environments of hot cores clumps of dense molecular gas surrounding the sites of star formation. However, its not yet fully understood how the complex organic molecules found in hot cores come to be. One possibility is that the compounds condense onto cold dust grains long before the young stars begin heating their natal shrouds. Alternatively, they might assemble themselves from the hot, dense gas surrounding the blazing protostars.Composite infrared and optical image of the N 113 star-forming region in the LMC. The ALMA coverage is indicated by the gray line. Click to enlarge. [Sewio et al. 2018]Detecting Complexity, a Galaxy AwayUsing ALMA, a team of researchers led by Marta Sewio (NASA Goddard Space Flight Center) recently detected two complex organic molecules methyl formate and dimethyl ether for the first time in our neighboring galaxy, the Large Magellanic Cloud (LMC). Previous searches for organic molecules in the LMC detected small amounts of methanol, the parentmolecule of the two newly-discovered compounds. By revealing the spectral signatures of dimethyl ether and methyl formate, Sewio and collaboratorsfurther prove thatorganic chemistry is hard at work in hot cores in the LMC.This discovery is momentous because dwarf galaxies like theLMC tend to have a lower abundance of the heavy elements that make up complex organic molecules most importantly, oxygen, carbon, and nitrogen. Beyond lacking the raw materials necessary to create complex molecules, the gas of low-metallicity galaxies does a poorer job preventing the penetration of high-energy photons. The impinging photons warm dust grains, resulting in a lower probability of forming and maintaining complex organic molecules. Despite this, organic molecules appear to beable todevelop and persist which has exciting implications for organic chemistry in low-metallicity environments.ALMA observation of emission by methyl formate in a hot core in the LMC.[Adapted from Sewio et al. 2018]A Lens into the PastIn the early universe, before the budding galaxies have had time to upcycle their abundant hydrogen into heavier elements, organic chemistry is thought to proceed slowly or not at all. The discovery of complex organic molecules in a nearby low-metallicity galaxy upends this theory and propels us toward a better understanding of the organic chemistry in the early universe.CitationMarta Sewio et al 2018ApJL853L19. doi:10.3847/2041-8213/aaa079

Target of rapamycin complex 1 and Tap42-associated phosphatases are required for sensing changes in nitrogen conditions in the yeast Saccharomyces cerevisiae.

PubMed

Li, Jinmei; Yan, Gonghong; Liu, Sichi; Jiang, Tong; Zhong, Mingming; Yuan, Wenjie; Chen, Shaoxian; Zheng, Yin; Jiang, Yong; Jiang, Yu

2017-12-01

In yeast target of rapamycin complex 1 (TORC1) and Tap42-associated phosphatases regulate expression of genes involved in nitrogen limitation response and the nitrogen discrimination pathway. However, it remains unclear whether TORC1 and the phosphatases are required for sensing nitrogen conditions. Utilizing temperature sensitive mutants of tor2 and tap42, we examined the role of TORC1 and Tap42 in nuclear entry of Gln3, a key transcription factor in yeast nitrogen metabolism, in response to changes in nitrogen conditions. Our data show that TORC1 is essential for Gln3 nuclear entry upon nitrogen limitation and downshift in nitrogen quality. However, Tap42-associated phosphatases are required only under nitrogen limitation condition. In cells grown in poor nitrogen medium, the nitrogen permease reactivator kinase (Npr1) inhibits TORC1 activity and alters its association with Tap42, rendering Tap42-associated phosphatases unresponsive to nitrogen limitation. These findings demonstrate a direct role for TORC1 and Tap42-associated phosphatases in sensing nitrogen conditions and unveil an Npr1-dependent mechanism that controls TORC1 and the phosphatases in response to changes in nitrogen quality. © 2017 John Wiley & Sons Ltd.

Sources of reactive nitrogen in marine aerosol over the Northwest Pacific Ocean in spring

NASA Astrophysics Data System (ADS)

Luo, Li; Kao, Shuh-Ji; Bao, Hongyan; Xiao, Huayun; Xiao, Hongwei; Yao, Xiaohong; Gao, Huiwang; Li, Jiawei; Lu, Yangyang

2018-05-01

Atmospheric deposition of long-range transport of anthropogenic reactive nitrogen (Nr, mainly comprised of NHx, NOy and water-soluble organic nitrogen, WSON) from continents may have profound impact on marine biogeochemistry. In addition, surface ocean dissolved organic nitrogen (DON) may also contribute to aerosol WSON in the overlying atmosphere. Despite the importance of off-continent dispersion and Nr interactions at the atmosphere-ocean boundary, our knowledge of the sources of various nitrogen species in the atmosphere over the open ocean remains limited due to insufficient observations. We conducted two cruises in the spring of 2014 and 2015 from the coast of China through the East China seas (ECSs, i.e. the Yellow Sea and East China Sea) to the open ocean (i.e. the Northwest Pacific Ocean, NWPO). Concentrations of water-soluble total nitrogen (WSTN), NO3- and NH4+, as well as the δ15N of WSTN and NO3- in marine aerosol, were measured during both cruises. In the spring of 2015, we also analysed the concentrations and δ15N of NO3- and the DON of surface seawater (SSW; at a depth of 5 m) along the cruise track. Aerosol NO3-, NH4+ and WSON decreased logarithmically (1-2 orders of magnitude) with distance from the shore, reflecting strong anthropogenic emission sources of NO3-, NH4+ and WSON in China. Average aerosol NO3- and NH4+ concentrations were significantly higher in 2014 (even in the remote NWOP) than in 2015 due to the stronger wind field in 2014, underscoring the role of the Asian winter monsoon in the seaward transport of anthropogenic NO3- and NH4+. However, the background aerosol WSON over the NWPO in 2015 (13.3 ± 8.5 nmol m-3) was similar to that in 2014 (12.2 ± 6.3 nmol m-3), suggesting an additional non-anthropogenic WSON source in the open ocean. Obviously, marine DON emissions should be considered in model and field assessments of net atmospheric WSON deposition in the open ocean. This study contributes information on parallel isotopic marine DON composition and aerosol Nr datasets, but more research is required to explore complex Nr sources and deposition processes in order to advance our understanding of anthropogenic influences on the marine nitrogen cycle and nitrogen exchange at land-ocean and atmosphere-ocean interfaces.

Conductive polymer-based material

DOEpatents

McDonald, William F [Utica, OH; Koren, Amy B [Lansing, MI; Dourado, Sunil K [Ann Arbor, MI; Dulebohn, Joel I [Lansing, MI; Hanchar, Robert J [Charlotte, MI

2007-04-17

Disclosed are polymer-based coatings and materials comprising (i) a polymeric composition including a polymer having side chains along a backbone forming the polymer, at least two of the side chains being substituted with a heteroatom selected from oxygen, nitrogen, sulfur, and phosphorus and combinations thereof; and (ii) a plurality of metal species distributed within the polymer. At least a portion of the heteroatoms may form part of a chelation complex with some or all of the metal species. In many embodiments, the metal species are present in a sufficient concentration to provide a conductive material, e.g., as a conductive coating on a substrate. The conductive materials may be useful as the thin film conducting or semi-conducting layers in organic electronic devices such as organic electroluminescent devices and organic thin film transistors.

Preparation of nanoporous metal foam from high nitrogen transition metal complexes

DOEpatents

Tappan, Bryce C.; Huynh, My Hang V.; Hiskey, Michael A.; Son, Steven F.; Oschwald, David M.; Chavez, David E.; Naud, Darren L.

2006-11-28

Nanoporous metal foams are prepared by ignition of high nitrogen transition metal complexes. The ammonium salts of iron(III) tris[bi(tetrazolato)-amine], cobalt(III) tris(bi(tetrazolato)amine), and high nitrogen compounds of copper and silver were prepared as loose powders, pressed into pellets and wafers, and ignited under an inert atmosphere to form nanoporous metal foam monoliths having very high surface area and very low density.

Nitrogen isotopes from terrestrial organic matter as a new paleoclimatic proxy for pre-quaternary time

NASA Astrophysics Data System (ADS)

Tramoy, romain; Schnyder, johann; thuy Nguyen Tu, thanh; Yans, johan; Storme, jean yves; Sebilo, mathieu; Derenne, sylvie; Jacob, jérémy; Baudin, françois

2014-05-01

Marine and lacustrine sedimentary organic matter is often dominated by algal-bacterial production. Its nitrogen isotopic composition (δ15Norg) is frequently used to reconstruct biogeochemical processes involved in the nitrogen cycle, such as N utilization by organisms (e.g. Altabet et al., 1995), denitrification and diagenesis processes (e.g. Altabet et al., 1995; Sebilo et al., 2003; Gälman et al., 2009) or to evidence N sources variability (e.g. Hodell and Schelske, 1998; Vreca and Muri, 2006) . However, all these parameters and processes make N isotopic signals in marine and lacustrine environments often very complex to interpret. After pioneer studies, Mariotti et al. (1981), Austin and Vitousek (1998), Amundson et al. (2003), Swap et al. (2004), and Liu and Wang (2008) have shown that the δ15Norg of modern or quaternary terrestrial plants seem to be positively correlated with temperature and negatively correlated with precipitations. Therefore, δ15Norg of terrestrial OM might be a better record for paleoclimatic studies than δ15Norg of sedimentary OM dominated by algal-bacterial production. Recently, promising organic nitrogen isotopic data (δ15Norg) have been published on lignites from the Dieppe-Hampshire Basin (Paleocene-Eocene transition, Normandy (Storme et al., 2012). Authors suggest that the δ15Norg recorded local paleoclimatic and paleoenvironmental conditions. Following these results, the aim of this work is to test the use of stable nitrogen isotopes in terrestrial OM as a new paleoclimatic marker for pre-quaternary geological series. Does δ15Norg constitute a valuable tool to reconstruct past climates? What are the limits in the use of this proxy and possible methodological bias related to organic sources or diagenetic processes? To address these questions, δ15Norg must be measured in samples from periods associated with large and well documented climate change. We therefore selected a Liassic continental sedimentary succession from Taskomirsay, Kazakhstan. This succession is rich in dispersed OM and wood fragments allowing accurate N isotopes measurements. Preliminary results on δ13Corg and palynology suggest that the Pliensbachian/Toarcian transition is recorded at the top of the sedimentary succession. This transition has been studied for a long time since it is characterized by one of the most important global environmental and climatic change of the Phanerozoic time ( Jenkyns, 1988; Hermoso et al., 2012). We are therefore testing the paleoclimatic "proxy" potential of δ15Norg for this time interval by comparing the δ15Norg signal with other indicators more classically used for paleoclimate studies. We have also investigated the influence of differences in organic sources and of early diagenesis on the δ15Norg variations.

A theoretical investigation on the neutral Cu(I) phosphorescent complexes with azole-based and phosphine mixed ligand

NASA Astrophysics Data System (ADS)

Ding, Xiao-Li; Shen, Lu; Zou, Lu-Yi; Ma, Ming-Shuo; Ren, Ai-Min

2018-04-01

A theoretical study on a series of neutral heteroleptic Cu(I) complexes with different azole-pyridine-based N^N ligands has been presented to get insight into the effect of various nitrogen atoms in the azole ring on photophysical properties. The results reveal that the highest occupied molecular orbital (HOMO) levels and the emission wavelengths of these complexes are mainly governed by the nitrogen atom number in azole ring. With the increasing number of nitrogen atom , the electron density distribution of HOMO gradually extend from the N^N ligand to the whole molecule, meanwhile, the improved contribution from Cu(d) orbits in HOMO results in an effective mixing of various charge transfermodes, and hence, the fast radiative decay(kr) and the slow non-radiative decay rate(knr) are achieved. The photoluminescence quantum yield (PLQY) show an apparent dependence on the nitrogen atom number in the five-membered nitrogen heterocycles. However, the increasing number of nitrogen atoms is not necessary for increasing PLQY. The complex 3 with 1,2,4-triazole-pyridine-based N^N ligands is considered to be a potential emitter with high phosphorescence efficiency. Finally, we hope that our investigations will contribute to systematical understanding and guiding for material molecular engineering.

Electrochemically fabricated polypyrrole-cobalt-oxygen coordination complex as high-performance lithium-storage materials.

PubMed

Guo, Bingkun; Kong, Qingyu; Zhu, Ying; Mao, Ya; Wang, Zhaoxiang; Wan, Meixiang; Chen, Liquan

2011-12-23

Current lithium-ion battery (LIB) technologies are all based on inorganic electrode materials, though organic materials have been used as electrodes for years. Disadvantages such as limited thermal stability and low specific capacity hinder their applications. On the other hand, the transition metal oxides that provide high lithium-storage capacity by way of electrochemical conversion reaction suffer from poor cycling stability. Here we report a novel high-performance, organic, lithium-storage material, a polypyrrole-cobalt-oxygen (PPy-Co-O) coordination complex, with high lithium-storage capacity and excellent cycling stability. Extended X-ray absorption fine structure and Raman spectroscopy and other physical and electrochemical characterizations demonstrate that this coordination complex can be electrochemically fabricated by cycling PPy-coated Co(3)O(4) between 0.0 V and 3.0 V versus Li(+)/Li. Density functional theory (DFT) calculations indicate that each cobalt atom coordinates with two nitrogen atoms within the PPy-Co coordination layer and the layers are connected with oxygen atoms between them. Coordination weakens the C-H bonds on PPy and makes the complex a novel lithium-storage material with high capacity and high cycling stability. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Sediment-bound total organic carbon and total organic nitrogen losses from conventional and strip tillage cropping systems

USDA-ARS?s Scientific Manuscript database

Soil erosion and sediment loss with runoff are closely linked to global carbon and nitrogen cycles. Reducing tillage has been shown to reduce erosion and runoff sediment-bound carbon (C) and nitrogen (N) losses. However, published studies represent only a few soil types and regions and rarely direct...

Determination of the Fate of Dissolved Organic Nitrogen in the Three Wastewater Treatment Plants, Jordan

ERIC Educational Resources Information Center

Wedyan, Mohammed; Al Harahsheh, Ahmed; Qnaisb, Esam

2016-01-01

This research aimed to assess the composition of total dissolved nitrogen (TDN) species, particularly dissolved organic nitrogen (DON), over the traditional wastewater treatment operations in three biological nutrient removal (BNR) wastewater treatment plants (WWTPs) in Jordan. It had been found that the DON percentage was up to 30% of TDN within…

[Nitrogen pool in northern taiga larch forests of Central Siberia].

PubMed

Shugaleĭ, L S; Vedrova, E F

2004-01-01

The pools of nitrogen in different blocks of forest ecosystems and its cycle in the soil are considered. It is shown that the bulk of nitrogen concentrates in the soil and dead organic matter (necromass) of an ecosystem. The nitrogen pool of forest litters and soils consists by 83-93% of the inert compounds that cannot be involved in the biological cycle. Mineralization of organic nitrogen-containing substances in the litters and soils usually yields ammonium as an end product. The amount of nitrogen mineralized over the growing season is partially expended for annual plant increment (30-65%) and immobilization (12-17%), with its large proportion being found in the soil.

Biofilter for removal of nitrogen oxides from contaminated gases under aerobic conditions

DOEpatents

Apel, W.A.

1998-08-18

A biofilter is described for reducing concentrations of gaseous nitrogen oxides in a polluted gas comprises a porous organic filter bed medium disposed in a housing, the filter bed medium including a mixed culture of naturally occurring denitrifying bacteria for converting the nitrogen oxides to nitrogen gas, carbon dioxide, and water. A method is described of reducing concentrations of nitrogen oxides in polluted gas comprises conducting the polluted gas through the biofilter so that the denitrifying bacteria can degrade the nitrogen oxides. A preferred filter medium is wood compost, however composts of other organic materials are functional. Regulation of pH, moisture content, exogenous carbon sources, and temperature are described. 6 figs.

[Relationship between Fe, Al oxides and stable organic carbon, nitrogen in the yellow-brown soils].

PubMed

Heng, Li-Sha; Wang, Dai-Zhang; Jiang, Xin; Rao, Wei; Zhang, Wen-Hao; Guo, Chun-Yan; Li, Teng

2010-11-01

The stable organic carbon and nitrogen of the different particles were gained by oxidation of 6% NaOCl in the yellow-brown soils. The relationships between the contents of selective extractable Fe/Al and the stable organic carbon/nitrogen were investigated. It shown that amounts of dithionite-citrate-(Fe(d)) and oxalate-(Fe(o)) and pyrophosphate extractable (Fe(p)) were 6-60.8 g x kg(-1) and 0.13-4.8 g x kg(-1) and 0.03-0.47 g x kg(-1) in 2-250 microm particles, respectively; 43.1-170 g x kg(-1) and 5.9-14.0 g x kg(-1) and 0.28-0.78 g x kg(-1) in < 2 microm particles, respectively. The contents of oxalate-(Al(o)) and pyrophosphate extractable (Al(p)) were 0.08-1.34 g x kg(-10 and 0.11-0.47 g x kg(-1) in 2-250 microm particles, respectively; 2.96-6.20 g x kg(-1) and 0.38-0.78 g x kg(-1) in < 2 microm particles, respectively. And amounts of selective extractable Fe are generally higher in paddy yellow-brown soils than in arid yellow-brown soils, and that of selective extractable Al are lower in the former than in the latter. Amounts of the stable organic carbon and nitrogen, higher in paddy yellow-brown soils than in arid yellow-brown soils, were 0.93-6.0 g x kg(-1) and 0.05-0.36 g x kg(-1) in 2-250 microm particles, respectively; 6.05-19.3 g x kg(-1) and 0.61-2.1 g x kg(-1) in < 2 microm particles, respectively. The ratio of the stable organic carbon and nitrogen (C(stable)/N(stable)) were 9.50-22.0 in 2-250 microm particles and 7.43-11.54 in < 2 microm particles, respectively. The stabilization index (SI(C) and SI(N)) of the organic carbon and nitrogen were 14.3-50.0 and 11.9-55.6 in 2-250 microm particles, respectively; 53.72-88.80 and 40.64-70.0 in < 2 microm particles, respectively. According to SI, it is lower in arid yellow-brown soils than in paddy yellow-brown soils. The organic carbon and nitrogen are advantageously conserved in paddy yellow-brown soil. An extremely significant positive correlation of the stable organic carbon and nitrogen with selective extractable Fe/Al is observed. The most amounts between the stable organic carbon and nitrogen and selective extractable Fe/Al appear in clay particles, namely the clay particles could protect the soil organic carbon and nitrogen.

Isotopic characterization as a screening tool in authentication of organic produce commercially available in western North America.

PubMed

Verenitch, Sergei; Mazumder, Asit

2015-01-01

The use of nitrogen stable isotopes to discriminate between conventionally and organically grown crops has been further developed in this study. Soil and irrigation water from different regions, as well as nitrogen fertilizers used, have been examined in detail to determine their effects on nitrogen isotope composition of spinach, lettuce, broccoli and tomatoes. Over 1000 samples of various types of organically and conventionally grown produce of known origin, along with the samples of nitrogen fertilizers used for their growth, have been analysed in order to assemble the datasets of crop/fertilizer correlations. The results demonstrate that the developed approach can be used as a valuable component in the verification of agricultural practices for more than 25 different types of commercially grown green produce, either organic or conventional. Over a period of two years, various organic and non-organic greens, from different stores in Seattle (WA, USA) and Victoria (BC, Canada), were collected and analysed using this methodology with the objective of determining any pattern of misrepresentation.

Method for reducing NOx during combustion of coal in a burner

DOEpatents

Zhou, Bing [Cranbury, NJ; Parasher, Sukesh [Lawrenceville, NJ; Hare, Jeffrey J [Provo, UT; Harding, N Stanley [North Salt Lake, UT; Black, Stephanie E [Sandy, UT; Johnson, Kenneth R [Highland, UT

2008-04-15

An organically complexed nanocatalyst composition is applied to or mixed with coal prior to or upon introducing the coal into a coal burner in order to catalyze the removal of coal nitrogen from the coal and its conversion into nitrogen gas prior to combustion of the coal. This process leads to reduced NOx production during coal combustion. The nanocatalyst compositions include a nanoparticle catalyst that is made using a dispersing agent that can bond with the catalyst atoms. The dispersing agent forms stable, dispersed, nano-sized catalyst particles. The catalyst composition can be formed as a stable suspension to facilitate storage, transportation and application of the catalyst nanoparticles to a coal material. The catalyst composition can be applied before or after pulverizing the coal material or it may be injected directly into the coal burner together with pulverized coal.

Can δ(15)N in lettuce tissues reveal the use of synthetic nitrogen fertiliser in organic production?

PubMed

Sturm, Martina; Kacjan-Maršić, Nina; Lojen, Sonja

2011-01-30

The nitrogen isotopic fingerprint (δ(15)N) is reported to be a promising indicator for differentiating between organically and conventionally grown vegetables. However, the effect on plant δ(15)N of split nitrogen fertilisation, which could enable farmers to cover up the use of synthetic fertiliser, is not well studied. In this study the use of δ(15)N in lettuce as a potential marker for identifying the use of synthetic nitrogen fertiliser was tested on pot-grown lettuce (Lactuca sativa L.) treated with synthetic and organic nitrogen fertilisers (single or split application). The effect of combined usage of synthetic and organic fertilisers on δ(15)N was also investigated. The δ(15)N values of whole plants treated with different fertilisers differed significantly when the fertiliser was applied in a single treatment. However, additional fertilisation (with isotopically the same or different fertiliser) did not cause a significant alteration of plant δ(15)N. The findings of the study suggest that the δ(15)N value of lettuce tissues could be used as a rough marker to reveal the history of nitrogen fertilisation, but only in the case of single fertiliser application. However, if the difference in δ(15)N between the applied synthetic and organic nitrogen fertilisers was > 9.1 ‰, the detection of split and combined usage of the fertilisers would have greater discriminatory power. 2010 Society of Chemical Industry.

Different nitrogen sources change the transcriptome of welan gum-producing strain Sphingomonas sp. ATCC 31555.

PubMed

Xu, Xiaopeng; Nie, Zuoming; Zheng, Zhiyong; Zhu, Li; Zhang, Hongtao; Zhan, Xiaobei

2017-09-01

To reveal effects of different nitrogen sources on the expressions and functions of genes in Sphingomonas sp. ATCC 31555, it was cultivated in medium containing inorganic nitrogen (IN), organic nitrogen (ON), or inorganic-organic combined nitrogen (CN). Welan gum production and bacterial biomass were determined, and RNA sequencing (RNA-seq) was performed. Differentially expressed genes (DEGs) between the different ATCC 31555 groups were identified, and their functions were analyzed. Welan gum production and bacterial biomass were significantly higher in the ON and CN groups compared with those in the IN group. RNA-seq produced 660 unigenes, among which 488, 731, and 844 DEGs were identified between the IN vs. ON, IN vs. CN, and ON vs. CN groups, respectively. All the DEGs were related significantly to metabolic process and signal transduction. DEGs between the IN vs. CN and ON vs. CN groups were potentially associated with bacterial chemotaxis. Real-time PCR confirmed the expressions of selected DEGs. Organic nitrogen led to higher bacterial biomass and welan gum production than inorganic nitrogen, which might reflect differences in gene expression associated with metabolic process, signal transduction, and bacterial chemotaxis induced by different nitrogen sources.

Plasma polymerization of an ethylene-nitrogen gas mixture

NASA Technical Reports Server (NTRS)

Hudis, M.; Wydeven, T.

1975-01-01

A procedure has been developed whereby nitrogen can be incorporated into an organic film from an ethylene-nitrogen gas mixture using an internal electrode capacitively coupled radio frequency reactor. The presence of nitrogen has been shown directly by infrared transmittance spectra and electron spectroscopic chemical analysis data, and further indirect evidence was provided by dielectric measurements and by the reverse osmosis properties of the film. Preparation of a nitrogen containing film did not require vapor from an organic nitrogen containing liquid monomer. Some control over the bonding and stoichiometry of the polymer film was provided by the added degree of freedom of the nitrogen partial pressure in the gas mixture. This new parameter strongly affected the dielectric properties of the plasma polymerized film and could affect the reverse osmosis behavior.

Distribution and biodegradability of water soluble organic carbon and nitrogen in subarctic Alaskan soils under three different land uses

USDA-ARS?s Scientific Manuscript database

Water-extractable organic matter (WEOM) contains labile organic carbon (C) and nitrogen (N) and is sensitive to soil management. However, knowledge about quantitative changes of water soluble organic C (WSOC) and N (WSON) impacted by land use conversion is still limited. In this chapter, the level a...

Reactions of Ground State Nitrogen Atoms N(4S) with Astrochemically-Relevant Molecules on Interstellar Dusts

NASA Astrophysics Data System (ADS)

Krim, Lahouari; Nourry, Sendres

2015-06-01

In the last few years, ambitious programs were launched to probe the interstellar medium always more accurately. One of the major challenges of these missions remains the detection of prebiotic compounds and the understanding of reaction pathways leading to their formation. These complex heterogeneous reactions mainly occur on icy dust grains, and their studies require the coupling of laboratory experiments mimicking the extreme conditions of extreme cold and dilute media. For that purpose, we have developed an original experimental approach that combine the study of heterogeneous reactions (by exposing neutral molecules adsorbed on ice to non-energetic radicals H, OH, N...) and a neon matrix isolation study at very low temperatures, which is of paramount importance to isolate and characterize highly reactive reaction intermediates. Such experimental approach has already provided answers to many questions raised about some astrochemically-relevant reactions occurring in the ground state on the surface of dust grain ices in dense molecular clouds. The aim of this new present work is to show the implication of ground state atomic nitrogen on hydrogen atom abstraction reactions from some astrochemically-relevant species, at very low temperatures (3K-20K), without providing any external energy. Under cryogenic temperatures and with high barrier heights, such reactions involving N(4S) nitrogen atoms should not occur spontaneously and require an initiating energy. However, the detection of some radicals species as byproducts, in our solid samples left in the dark for hours at 10K, proves that hydrogen abstraction reactions involving ground state N(4S) nitrogen atoms may occur in solid phase at cryogenic temperatures. Our results show the efficiency of radical species formation stemming from non-energetic N-atoms and astrochemically-relevant molecules. We will then discuss how such reactions, involving nitrogen atoms in their ground states, might be the first key step towards complex organic molecules production in the interstellar medium.

The role of aromatic precursors in the formation of haloacetamides by chloramination of dissolved organic matter.

PubMed

Le Roux, Julien; Nihemaiti, Maolida; Croué, Jean-Philippe

2016-01-01

Water treatment utilities are diversifying their water sources and often rely on waters enriched in nitrogen-containing compounds (e.g., ammonia, organic nitrogen such as amino acids). The disinfection of waters exhibiting high levels of nitrogen has been associated with the formation of nitrogenous disinfection byproducts (N-DBPs) such as haloacetonitriles (HANs) and haloacetamides (HAcAms). While the potential precursors of HANs have been extensively studied, only few investigations are available regarding the nature of HAcAm precursors. Previous research has suggested that HAcAms are hydrolysis products of HANs. Nevertheless, it has been recently suggested that HAcAms can be formed independently, especially during chloramination of humic substances. When used as a disinfectant, monochloramine can also be a source of nitrogen for N-DBPs. This study investigated the role of aromatic organic matter in the formation of N-DBPs (HAcAms and HANs) upon chloramination. Formation kinetics were performed from various fractions of organic matter isolated from surface waters or treated wastewater effluents. Experiments were conducted with (15)N-labeled monochloramine ((15)NH2Cl) to trace the origin of nitrogen. N-DBP formation showed a two-step profile: (1) a rapid formation following second-order reaction kinetics and incorporating nitrogen atom originating from the organic matrix (e.g., amine groups); and (2) a slower and linear increase correlated with exposure to chloramines, incorporating inorganic nitrogen ((15)N) from (15)NH2Cl into aromatic moieties. Organic matter isolates showing high aromatic character (i.e., high SUVA) exhibited high reactivity characterized by a major incorporation of (15)N in N-DBPs. A significantly lower incorporation was observed for low-aromatic-content organic matter. (15)N-DCAcAm and (15)N-DCAN formations exhibited a linear correlation, suggesting a similar behavior of (15)N incorporation as SUVA increases. Chloramination of aromatic model compounds (i.e., phenol and resorcinol) showed higher HAcAm and HAN formation potentials than nitrogenous precursors (i.e., amino acids) usually considered as main precursors of these N-DBPs. These results demonstrate the importance of aromatic organic compounds in the formation of N-DBPs, which is of significant importance for water treatment facilities using chloramines as final disinfectant. Copyright © 2015 Elsevier Ltd. All rights reserved.

Vertical nitrogen flux from the oceanic photic zone by diel migrant zooplankton and nekton

NASA Astrophysics Data System (ADS)

Longhurst, Alan R.; Glen Harrison, W.

1988-06-01

Where the photic zone is a biological steady-state, the downward flux of organic material across the pycnocline to the interior of the ocean is thought to be balanced by upward turbulent flux of inorganic nitrogen across the nutricline. This model ignores a significant downward dissolved nitrogen flux caused by the diel vertical migration of interzonal zooplankton and nekton that feed in the photic zone at night and excrete nitrogenous compounds at depth by day. In the oligotrophic ocean this flux can be equivalent to the flux of particulate organic nitrogen from the photic zone in the form of faecal pellets and organic flocculates. Where nitrogen is the limiting plant nutrient, and the flux by diel migration of interzonal plankton is significant compared to other nitrogen exports from the photic zone, there must be an upward revision of previous estimates for the ratio of new to total primary production in the photic zone if a nutrient balance is to be maintained. This upward revision is of the order 5-100% depending on the oceanographic regime.

Selection of nitrogen-fixing deficient Burkholderia vietnamiensis strains by cystic fibrosis patients: involvement of nif gene deletions and auxotrophic mutations.

PubMed

Menard, Aymeric; Monnez, Claire; Estrada de Los Santos, Paulina; Segonds, Christine; Caballero-Mellado, Jesus; Lipuma, John J; Chabanon, Gerard; Cournoyer, Benoit

2007-05-01

Burkholderia vietnamiensis is the third most prevalent species of the Burkholderia cepacia complex (Bcc) found in cystic fibrosis (CF) patients. Its ability at fixing nitrogen makes it one of the main Bcc species showing strong filiations with environmental reservoirs. In this study, 83% (29 over 35) of the B. vietnamiensis CF isolates and 100% of the environmental ones (over 29) were found expressing the dinitrogenase complex (encoded by the nif cluster) which is essential in N(2) fixation. Among the deficient strains, two were found growing with ammonium chloride suggesting that they were defective in N(2) fixation, and four with amino acids supplements suggesting that they were harbouring auxotrophic mutations. To get insights about the genetic events that led to the emergence of the N(2)-fixing defective strains, a genetic analysis of B. vietnamiensis nitrogen-fixing property was undertaken. A 40-kb-long nif cluster and nif regulatory genes were identified within the B. vietnamiensis strain G4 genome sequence, and analysed. Transposon mutagenesis and nifH genetic marker exchanges showed the nif cluster and several other genes like gltB (encoding a subunit of the glutamate synthase) to play a key role in B. vietnamiensis ability at growing in nitrogen-free media. nif cluster DNA probings of restricted genomic DNA blots showed a full deletion of the nif cluster for one of the N(2)-fixing defective strain while the other one showed a genetic organization similar to the one of the G4 strain. For 17% of B. vietnamiensis clinical strains, CF lungs appeared to have favoured the selection of mutations or deletions leading to N(2)-fixing deficiencies.

Complex organic molecules in the Galactic Centre: the N-bearing family

NASA Astrophysics Data System (ADS)

Zeng, S.; Jiménez-Serra, I.; Rivilla, V. M.; Martín, S.; Martín-Pintado, J.; Requena-Torres, M. A.; Armijos-Abendaño, J.; Riquelme, D.; Aladro, R.

2018-05-01

We present an unbiased spectral line survey toward the Galactic Centre (GC) quiescent giant molecular cloud (QGMC), G+0.693 using the GBT and IRAM 30 telescopes. Our study highlights an extremely rich organic inventory of abundant amounts of nitrogen (N)-bearing species in a source without signatures of star formation. We report the detection of 17 N-bearing species in this source, of which 8 are complex organic molecules (COMs). A comparison of the derived abundances relative to H2 is made across various galactic and extragalactic environments. We conclude that the unique chemistry in this source is likely to be dominated by low-velocity shocks with X-rays/cosmic rays also playing an important role in the chemistry. Like previous findings obtained for O-bearing molecules, our results for N-bearing species suggest a more efficient hydrogenation of these species on dust grains in G+0.693 than in hot cores in the Galactic disk, as a consequence of the low dust temperatures coupled with energetic processing by X-ray/cosmic ray radiation in the GC.

Marine biogenic sources of organic nitrogen and water-soluble organic aerosols over the western North Pacific in summer

NASA Astrophysics Data System (ADS)

Miyazaki, Y.; Kawamura, K.; Sawano, M.

2009-12-01

Size-segregated aerosol samples of organic nitrogen (ON) as well as water-soluble organic compounds were obtained over the western North Pacific in the summer of 2008. Mass contributions of organics to the total aerosol mass were 20-40% in the supermicron mode and 45-60% in the submicron mode. ON as well as diacids and water-soluble organic carbon (WSOC) showed bimodal size distributions over the remote ocean, where high values of chlorophyll-a concentrations and depth-integrated primary production were observed. The ON concentrations increased with increasing biogenic tracer compounds such as methanesulfuric acid (MSA) and azelaic acid (C9). The average concentrations of ON and organic carbon (OC) in aerosols more influenced by marine biological activity were found to be about two times greater than those in biologically less influenced aerosols. These results provide evidence of marine biogenic sources of ON as well as OC. An average ON/OC ratio in biologically more influenced aerosols was as high as 0.49±0.11, which is higher than that in biologically less influenced aerosols (0.35±0.10). This result indicates that organic aerosol in this region is enriched in organic nitrogen, which linked to oceanic biological activity and comparable in magnitude to the marine biogenic OC source. We discuss possible processes for primary and secondary production of ON and OC in these samples, and stable nitrogen and carbon isotope ratios for total nitrogen (TN) and total carbon (TC).

Nitrogen containing organic compounds in aerosols: results from TD-PTR-MS measurements during the CALNEX campaign

NASA Astrophysics Data System (ADS)

Holzinger, R.; Timkovsky, J.

2011-12-01

During the CALNEX campaign we deployed a thermal-desorption proton-transfer-reaction mass-spectrometer (TD-PTR-MS) at the Caltech ground site near downtown Los Angeles. The instrument was equipped with a time of flight mass spectrometer and a mass resolution power of ~4000 was realized under field conditions. Mass peaks could be determined at accuracy levels of +/- 3 mDa, which allowed identification by the empirical formula rather than by m/z alone. Over 900 ion species have been detected in aerosols. The largest signals (m/z 18.032, NH4+, and 45.991, NO2+) were attributed to ammonia and nitrate, respectively. 350 ion species accounted for 80% of the total measured mass of organic aerosol species. Of these, 66 species contained one nitrogen atom and 73 species contained two nitrogen atoms. Each group accounted for ~15% of the total measured mass. This suggests a ~30% contribution of nitrogen compounds to the total organic aerosol burden. However, this number could still underestimate the real fraction of nitrogen compounds for two reasons: (1) thermal desorption may cause decomposition of nitrogen compounds. E.g. peroxy nitrates rapidly decompose at temperatures above 100°C and produce NO2 which cannot be detected by the PTR-MS. (2) During protonation nitrogen functional groups may be preferentially lost. E.g. alkyl nitrates typically fragment during protonation in the PTR-MS. A minor fraction of the alkyl nitrates is detected as NO2+ and contributes to the signal at m/z 45.991, however, the majority is detected as alkyl ion without nitrogen. At this point it the overall loss of nitrogen due to these processes is hard to quantify. Our findings suggest that nitrogen chemistry plays a crucial role in producing secondary organic aerosol.

Long-term nitrogen behavior under treated wastewater infiltration basins in a soil-aquifer treatment (SAT) system.

PubMed

Mienis, Omer; Arye, Gilboa

2018-05-01

The long term behavior of total nitrogen and its components was investigated in a soil aquifer treatment system of the Dan Region Reclamation Project (Shafdan), Tel-Aviv, Israel. Use is made of the previous 40 years' secondary data for the main nitrogen components (ammonium, nitrate and organic nitrogen) in recharged effluent and observation wells located inside an infiltration basin. The wells were drilled to 106 and 67 m, both in a similar position within the basin. The transport characteristics of each nitrogen component were evaluated based on chloride travel-time, calculated by a cross-correlation between its concentration in the recharge effluent and the observation wells. Changes in the source of recharge effluent, wastewater treatment technology and recharge regime were found to be the main factors affecting turnover in total nitrogen and its components. During aerobic operation of the infiltration basins, most organic nitrogen and ammonium will be converted to nitrate. Total nitrogen removal in the upper part of the aquifer was found to be 47-63% by denitrification and absorption, and overall removal, including the lower part of the aquifer, was 49-83%. To maintain the aerobic operation of the infiltration fields, the total nitrogen load should remain below 10 mg/L. Above this limit, ammonium and organic nitrogen will be displaced into the aquifer. Copyright © 2018 Elsevier Ltd. All rights reserved.

Influence of natural zeolite and nitrification inhibitor on organics degradation and nitrogen transformation during sludge composting.

PubMed

Zhang, Junya; Sui, Qianwen; Li, Kun; Chen, Meixue; Tong, Juan; Qi, Lu; Wei, Yuansong

2017-04-01

Sludge composting is one of the most widely used treatments for sewage sludge resource utilization. Natural zeolite and nitrification inhibitor (NI) are widely used during composting and land application for nitrogen conservation, respectively. Three composting reactors (A-the control, B-natural zeolite addition, and C-3,4-dimethylpyrazole phosphate (DMPP) addition) were established to investigate the influence of NI and natural zeolite addition on organics degradation and nitrogen transformation during sludge composting conducted at the lab scale. The results showed that, in comparison with the control, natural zeolite addition accelerated organics degradation and the maturity of sludge compost was higher, while the DMPP addition slowed down the degradation of organic matters. Meanwhile, the nitrogen transformation functional genes including those responses for nitrification (amoA and nxrA) and denitrification (narG, nirS, nirK, and nosZ) were quantified through quantitative PCR (qPCR) to investigate the effects of natural zeolites andDMPP addition on nitrogen transformation. Although no significant difference in the abundance of nitrogen transformation functional genes was observed between treatments, addition of both natural zeolite and DMPP increases the final total nitrogen content by 48.6% and 23.1%, respectively. The ability of natural zeolite for nitrogen conservation was due to the absorption of NH 3 by compost, and nitrogen conservation by DMPP was achieved by the source reduction of denitrification. Besides, it was assumed that the addition of natural zeolite and DMPP may affect the activity of these genes instead of the abundance.

Influence of natural zeolite and nitrification inhibitor on organics degradation and nitrogen transformation during sludge composting.

PubMed

Zhang, Junya; Sui, Qianwen; Li, Kun; Chen, Meixue; Tong, Juan; Qi, Lu; Wei, Yuansong

2016-01-01

Sludge composting is one of the most widely used treatments for sewage sludge resource utilization. Natural zeolite and nitrification inhibitor (NI) are widely used during composting and land application for nitrogen conservation, respectively. Three composting reactors (A--the control, B--natural zeolite addition, and C--3,4-dimethylpyrazole phosphate (DMPP) addition) were established to investigate the influence of NI and natural zeolite addition on organics degradation and nitrogen transformation during sludge composting conducted at the lab scale. The results showed that, in comparison with the control, natural zeolite addition accelerated organics degradation and the maturity of sludge compost was higher, while the DMPP addition slowed down the degradation of organic matters. Meanwhile, the nitrogen transformation functional genes including those responses for nitrification (amoA and nxrA) and denitrification (narG, nirS, nirK, and nosZ) were quantified through quantitative PCR (qPCR) to investigate the effects of natural zeolites and DMPP addition on nitrogen transformation. Although no significant difference in the abundance of nitrogen transformation functional genes was observed between treatments, addition of both natural zeolite and DMPP increases the final total nitrogen content by 48.6% and 23.1%, respectively. The ability of natural zeolite for nitrogen conservation was due to the absorption of NH3 by compost, and nitrogen conservation by DMPP was achieved by the source reduction of denitrification. Besides, it was assumed that the addition of natural zeolite and DMPP may affect the activity of these genes instead of the abundance.

RELATIONSHIPS BETWEEEN NITROGEN LOADING AND CONCENTRATIONS OF NITROGEN AND CHLOROPHYLL IN COASTAL EMBAYMENTS

EPA Science Inventory

We describe results obtained with a simple model that uses loading rates of total nitrogen (TN), defined as dissolved inorganic nitrogen plus dissolved and particulate organic nitrogen, to calculate annually and spatially averaged concentrations of TN in coastal embayments. We al...

Organically fertilized onions (Allium cepa L.): effects of the fertilizer placement method on quercetin content and soil nitrogen dynamics.

PubMed

Mogren, Lars M; Caspersen, Siri; Olsson, Marie E; Gertsson, Ulla E

2008-01-23

Field-cured onions cv. Hyskin ( Allium cepa L.) supplied with organic nitrogen fertilizer were studied. The fertilizer was applied by broadcasting and harrowing, broadcasting and rotary cultivation, or placement between rows. Nitrogen dynamics were monitored throughout the growing season by soil sampling. Variation in quercetin content in the onion scales was analyzed by HPLC. The organically fertilized onions were compared with inorganically fertilized onions grown in the same field. Inoculation with arbuscular mycorrhizal fungi (AMF) in the row at sowing or during commercial transplant production was tested but did not significantly affect mycorrhizal root colonization levels in the field. Onions that received no fertilizer at all or that had fertilizer placed between rows had better establishment, probably due to more favorable soil nitrogen concentrations for seedling emergence. Broadcast application led to higher nitrogen concentration in the root zone, resulting in fewer but larger individual onions. Quercetin levels were not significantly altered as a result of nitrogen fertilizer source (inorganic or organic), application method, or mycorrhizal inoculation. However, variation between years was significant, with quercetin levels in 2004 almost twice as high as those in 2005.

[Effects of simulated nitrogen deposition on organic matter leaching in forest soil].

PubMed

Duan, Lei; ma, Xiao-Xiao; Yu, De-Xiang; Tan, Bing-Quan

2013-06-01

The impact of nitrogen deposition on the dynamics of carbon pool in forest soil was studied through a field experiment at Tieshanping, Chongqing in Southwest China. The changes of dissolved organic matter (DOM) concentration in soil water in different soil layers were monitored for five years after addition of ammonium nitrate (NH4NO3) or sodium nitrate (NaNO3) at the same dose as the current nitrogen deposition to the forest floor. The results indicated that the concentration and flux of dissolved organic carbon (DOC) were increased in the first two years and then decreased by fertilizing. Fertilizing also reduced the DOC/DON (dissolved organic nitrogen) ratio of soil water in the litter layer and the DOC concentration of soil water in the upper mineral layer, but had no significant effect on DOC flux in the lower soil layer. Although there was generally no effect of increasing nitrogen deposition on the forest carbon pool during the experimental period, the shift from C-rich to N-rich DOM might occur. In addition, the species of nitrogen deposition, i. e., NH4(+) and NO3(-), did not show difference in their effect on soil DOM with the same equivalence.

Iron speciation in peats: Chemical and spectroscopic evidence for the co-occurrence of ferric and ferrous iron in organic complexes and mineral precipitates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bhattacharyya, Amrita; Schmidt, Michael P.; Stavitski, Eli

The speciation of iron (Fe) in organic matter (OM)-rich environments under in situ variable redox conditions is largely unresolved. Peatlands provide a natural setting to study Fe–OM interactions. Utilizing chemical, spectroscopic and theoretical modeling approaches, we report the chemical forms, oxidation states and local coordination environment of naturally occurring Fe in the vertically redox-stratified Manning peatlands of western New York. In addition, we report dominant carbon, sulfur and nitrogen species that can potentially stabilize the various Fe species present in these peatlands. Our results provide clear direct and indirect evidence for the co-occurrence of ferrous (Fe 2+) and ferric (Femore » 3+) iron species in peats under both oxic and anoxic conditions. Iron is mostly present within the operationally defined organic and amorphous (i.e., short range ordered, SRO) fractions; ferric iron primarily as magnetically isolated paramagnetic Fe 3+ in Fe(III)-organic complexes, but also in mineral forms such as ferrihydrite; ferrous iron in tetrahedral coordination in Fe(II)-organic complexes with minor contribution from pyrite. All of the Fe species identified stabilize Fe(III) and/or Fe(II) in anoxic and oxic peats. Fundamental differences are also observed in the relative proportion of C, S and N functionalities of OM in oxic and anoxic peats. Aromatic C=C, ester, phenol and anomeric C (R-O-C-O-R), as well as thiol, sulfide and heterocyclic N functionalities are more prevalent in anoxic peats. Collectively, our experimental evidence suggests iron forms coordination complexes with O-, S- and N-containing functional groups of OM. We posit the co-occurrence of organic and mineral forms of Fe(II) and Fe(III) in both oxic and anoxic peat layers results from dynamic complexation and hydrolysis-precipitation reactions that occur under variable redox conditions. In conclusion, our findings aid in understanding the crucial role OM plays in determining Fe species in soils and sediments.« less

Iron speciation in peats: Chemical and spectroscopic evidence for the co-occurrence of ferric and ferrous iron in organic complexes and mineral precipitates

DOE PAGES

Bhattacharyya, Amrita; Schmidt, Michael P.; Stavitski, Eli; ...

2017-10-31

The speciation of iron (Fe) in organic matter (OM)-rich environments under in situ variable redox conditions is largely unresolved. Peatlands provide a natural setting to study Fe–OM interactions. Utilizing chemical, spectroscopic and theoretical modeling approaches, we report the chemical forms, oxidation states and local coordination environment of naturally occurring Fe in the vertically redox-stratified Manning peatlands of western New York. In addition, we report dominant carbon, sulfur and nitrogen species that can potentially stabilize the various Fe species present in these peatlands. Our results provide clear direct and indirect evidence for the co-occurrence of ferrous (Fe 2+) and ferric (Femore » 3+) iron species in peats under both oxic and anoxic conditions. Iron is mostly present within the operationally defined organic and amorphous (i.e., short range ordered, SRO) fractions; ferric iron primarily as magnetically isolated paramagnetic Fe 3+ in Fe(III)-organic complexes, but also in mineral forms such as ferrihydrite; ferrous iron in tetrahedral coordination in Fe(II)-organic complexes with minor contribution from pyrite. All of the Fe species identified stabilize Fe(III) and/or Fe(II) in anoxic and oxic peats. Fundamental differences are also observed in the relative proportion of C, S and N functionalities of OM in oxic and anoxic peats. Aromatic C=C, ester, phenol and anomeric C (R-O-C-O-R), as well as thiol, sulfide and heterocyclic N functionalities are more prevalent in anoxic peats. Collectively, our experimental evidence suggests iron forms coordination complexes with O-, S- and N-containing functional groups of OM. We posit the co-occurrence of organic and mineral forms of Fe(II) and Fe(III) in both oxic and anoxic peat layers results from dynamic complexation and hydrolysis-precipitation reactions that occur under variable redox conditions. In conclusion, our findings aid in understanding the crucial role OM plays in determining Fe species in soils and sediments.« less

Membrane rejection of nitrogen compounds

NASA Technical Reports Server (NTRS)

Lee, S.; Lueptow, R. M.

2001-01-01

Rejection characteristics of nitrogen compounds were examined for reverse osmosis, nanofiltration, and low-pressure reverse osmosis membranes. The rejection of nitrogen compounds is explained by integrating experimental results with calculations using the extended Nernst-Planck model coupled with a steric hindrance model. The molecular weight and chemical structure of nitrogen compounds appear to be less important in determining rejection than electrostatic properties. The rejection is greatest when the Donnan potential exceeds 0.05 V or when the ratio of the solute radius to the pore radius is greater than 0.8. The transport of solute in the pore is dominated by diffusion, although convective transport is significant for organic nitrogen compounds. Electromigration contributes negligibly to the overall solute transport in the membrane. Urea, a small organic compound, has lower rejection than ionic compounds such as ammonium, nitrate, and nitrite, indicating the critical role of electrostatic interaction in rejection. This suggests that better treatment efficiency for organic nitrogen compounds can be obtained after ammonification of urea.

Modeling Nitrogen Decrease in Water Lettuce Ponds from Waste Stabilization Ponds

NASA Astrophysics Data System (ADS)

Putri, Gitta Agnes; Sunarsih

2018-02-01

This paper presents about the dynamic modeling of the Water Lettuce ponds as a form of improvement from the Water Hyacinth ponds. The purpose of this paper is to predict nitrogen decrease and nitrogen transformation in Water Lettuce ponds integrated with Waste Stabilization Ponds. The model consists of 4 mass balances, namely Dissolved Organic Nitrogen (DON), Particulate Organic Nitrogen (PON), ammonium (NH4+), Nitrate and Nitrite (NOx). The process of nitrogen transformation which considered in a Water Lettuce ponds, namely hydrolysis, mineralization, nitrification, denitrification, plant and bacterial uptake processes. Numerical simulations are performed by giving the values of parameters and the initial values of nitrogen compounds based on a review of previous studies. Numerical results show that the rate of change in the concentration of nitrogen compounds in the integration ponds of waste stabilization and water lettuce decreases and reaches stable at different times.

Anaerobic digestion and co-digestion of slaughterhouse waste (SHW): influence of heat and pressure pre-treatment in biogas yield.

PubMed

Cuetos, M J; Gómez, X; Otero, M; Morán, A

2010-10-01

Mesophilic anaerobic digestion (34+/-1 degrees C) of pre-treated (for 20 min at 133 degrees C, >3 bar) slaughterhouse waste and its co-digestion with the organic fraction of municipal solid waste (OFMSW) have been assessed. Semi-continuously-fed digesters worked with a hydraulic retention time (HRT) of 36 d and organic loading rates (OLR) of 1.2 and 2.6 kg VS(feed)/m(3)d for digestion and co-digestion, respectively, with a previous acclimatization period in all cases. It was not possible to carry out an efficient treatment of hygienized waste, even less so when OFMSW was added as co-substrate. These digesters presented volatile fatty acids (VFA), long chain fatty acids (LCFA) and fats accumulation, leading to instability and inhibition of the degradation process. The aim of applying a heat and pressure pre-treatment to promote splitting of complex lipids and nitrogen-rich waste into simpler and more biodegradable constituents and to enhance biogas production was not successful. These results indicate that the temperature and the high pressure of the pre-treatment applied favoured the formation of compounds that are refractory to anaerobic digestion. The pre-treated slaughterhouse wastes and the final products of these systems were analyzed by FTIR and TGA. These tools verified the existence of complex nitrogen-containing polymers in the final effluents, confirming the formation of refractory compounds during pre-treatment. (c) 2010 Elsevier Ltd. All rights reserved.

Sources of organic nitrogen at the serpentinite-hosted Lost City hydrothermal field.

PubMed

Lang, S Q; Früh-Green, G L; Bernasconi, S M; Butterfield, D A

2013-03-01

The reaction of ultramafic rocks with water during serpentinization at moderate temperatures results in alkaline fluids with high concentrations of reduced chemical compounds such as hydrogen and methane. Such environments provide unique habitats for microbial communities capable of utilizing these reduced compounds in present-day and, possibly, early Earth environments. However, these systems present challenges to microbial communities as well, particularly due to high fluid pH and possibly the availability of essential nutrients such as nitrogen. Here we investigate the source and cycling of organic nitrogen at an oceanic serpentinizing environment, the Lost City hydrothermal field (30°N, Mid-Atlantic Ridge). Total hydrolizable amino acid (THAA) concentrations in the fluids range from 736 to 2300 nm and constitute a large fraction of the dissolved organic carbon (2.5-15.1%). The amino acid distributions, and the relative concentrations of these compounds across the hydrothermal field, indicate they most likely derived from chemolithoautotrophic production. Previous studies have identified the presence of numerous nitrogen fixation genes in the fluids and the chimneys. Organic nitrogen in actively venting chimneys has δ(15) N values as low as 0.1‰ which is compatible with biological nitrogen fixation. Total hydrolizable amino acids in the chimneys are enriched in (13) C by 2-7‰ compared to bulk organic matter. The distribution and absolute δ(13) C(THAA) values are compatible with a chemolithoautotrophic source, an attribution also supported by molar organic C/N ratios in most active chimneys (4.1-5.5) which are similar to those expected for microbial communities. In total, these data indicate nitrogen is readily available to microbial communities at Lost City. © 2013 Blackwell Publishing Ltd.

136. VIEW OF LIQUID NITROGEN/HELIUM HEAT EXCHANGER IN LIQUID NITROGEN ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

136. VIEW OF LIQUID NITROGEN/HELIUM HEAT EXCHANGER IN LIQUID NITROGEN CONTROL ROOM (115), LSB (BLDG. 770), FROM FUEL APRON WITH BAY DOOR OPEN - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 West, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

Re-assessing the nitrogen signal in continental margin sediments: New insights from the high northern latitudes

NASA Astrophysics Data System (ADS)

Knies, Jochen; Brookes, Steven; Schubert, Carsten J.

2007-01-01

Organic and inorganic nitrogen and their isotopic signatures were studied in continental margin sediments off Spitsbergen. We present evidence that land-derived inorganic nitrogen strongly dilutes the particulate organic signal in coastal and fjord settings and accounts for up to 70% of the total nitrogen content. Spatial heterogeneity in inorganic nitrogen along the coast is less likely to be influenced by clay mineral assemblages or various substrates than by the supply of terrestrial organic matter (TOM) within eroded soil material into selected fjords and onto the shelf. The δ15N signal of the inorganic nitrogen ( δ15N inorg) in sediments off Spitsbergen seems to be appropriate to trace TOM supply from various climate- and ecosystem zones and elucidates the dominant transport media of terrigenous sediments to the marine realm. Moreover, we postulate that with the study of sedimentary δ15N inorg in the Atlantic-Arctic gateway, climatically induced changes in catchment's vegetations in high northern latitudes may be reconstructed. The δ15N org signal is primarily controlled by the availability of nitrate in the dominating ocean current systems and the corresponding degree of utilization of the nitrate pool in the euphotic zone. Not only does this new approach allow for a detailed view into the nitrogen cycle for settings with purely primary-produced organic matter supply, it also provides new insights into both the deposition of marine and terrestrial nitrogen and its ecosystem response to (paleo-) climate changes.

Fragmentation analysis of water-soluble atmospheric organic matter using ultrahigh-resolution FT-ICR mass spectrometry.

PubMed

Leclair, Jeffrey P; Collett, Jeffrey L; Mazzoleni, Lynn R

2012-04-17

Isolated water-soluble atmospheric organic matter (AOM) analytes extracted from radiation fogwater samples were analyzed using collision induced dissociation with ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). Tandem mass analysis was performed on several mass ranges between 100 and 400 Da to characterize the functional groups of AOM species. Compounds containing nitrogen and/or sulfur were targeted because of the high number of oxygen atoms contained in their molecular formulas. Due to the large number of isobaric ions in the precursor isolation ranges, large numbers of product ions resulted from collision induced dissociation. Common neutral losses were assigned by matching the molecular formulas of the expected product ions with the detected product ions within the appropriate mass spectra. Since polar functional groups are expected to affect the hygroscopic properties of aerosols, the losses of H(2)O, CO(2), CH(3)OH, HNO(3), CH(3)NO(3), SO(3), SO(4) and combinations of these were specifically targeted. Among the 421 compounds studied, the most frequently observed neutral losses were CO(2) (54%), H(2)O (43%) and CH(3)OH (40%). HNO(3) losses were observed for 63% of the studied nitrogen containing compounds and 33% of the studied compounds containing both nitrogen and sulfur. SO(3) losses were observed for 85% of the studied sulfur containing compounds and 42% of studied compounds containing both nitrogen and sulfur. A number of molecular formulas matching those of monoterpene ozonolysis SOA were observed; they include organonitrates, organosulfates, and nitroxy-organosulfates. Overall, the results of fragmentation analysis of 400+ individual molecular precursors elucidate the complexity and multifunctional nature of the isolated water-soluble AOM.

Liquid absorbent solutions for separating nitrogen from natural gas

DOEpatents

Friesen, Dwayne T.; Babcock, Walter C.; Edlund, David J.; Lyon, David K.; Miller, Warren K.

2000-01-01

Nitrogen-absorbing and -desorbing compositions, novel ligands and transition metal complexes, and methods of using the same, which are useful for the selective separation of nitrogen from other gases, especially natural gas.

Ectomycorrhizal Cortinarius species participate in enzymatic oxidation of humus in northern forest ecosystems.

PubMed

Bödeker, Inga T M; Clemmensen, Karina E; de Boer, Wietse; Martin, Francis; Olson, Åke; Lindahl, Björn D

2014-07-01

In northern forests, belowground sequestration of nitrogen (N) in complex organic pools restricts nutrient availability to plants. Oxidative extracellular enzymes produced by ectomycorrhizal fungi may aid plant N acquisition by providing access to N in macromolecular complexes. We test the hypotheses that ectomycorrhizal Cortinarius species produce Mn-dependent peroxidases, and that the activity of these enzymes declines at elevated concentrations of inorganic N. In a boreal pine forest and a sub-arctic birch forest, Cortinarius DNA was assessed by 454-sequencing of ITS amplicons and related to Mn-peroxidase activity in humus samples with- and without previous N amendment. Transcription of Cortinarius Mn-peroxidase genes was investigated in field samples. Phylogenetic analyses of Cortinarius peroxidase amplicons and genome sequences were performed. We found a significant co-localization of high peroxidase activity and DNA from Cortinarius species. Peroxidase activity was reduced by high ammonium concentrations. Amplification of mRNA sequences indicated transcription of Cortinarius Mn-peroxidase genes under field conditions. The Cortinarius glaucopus genome encodes 11 peroxidases - a number comparable to many white-rot wood decomposers. These results support the hypothesis that some ectomycorrhizal fungi--Cortinarius species in particular--may play an important role in decomposition of complex organic matter, linked to their mobilization of organically bound N. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Population-level coordination of pigment response in individual cyanobacterial cells under altered nitrogen levels

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murton, Jaclyn; Nagarajan, Aparna; Nguyen, Amelia Y.

Cyanobacterial phycobilisome (PBS) pigment-protein complexes harvest light and transfer the energy to reaction centers. Previous ensemble studies have shown that cyanobacteria respond to changes in nutrient availability by modifying the structure of PBS complexes, but this process has not been visualized for individual pigments at the single-cell level due to spectral overlap. We characterized the response of four key photosynthetic pigments to nitrogen depletion and repletion at the subcellular level in individual, live Synechocystis sp. PCC 6803 cells using hyperspectral confocal fluorescence microscopy and multivariate image analysis. Our results revealed that PBS degradation and re-synthesis comprise a rapid response tomore » nitrogen fluctuations, with coordinated populations of cells undergoing pigment modifications. Chlorophyll fluorescence originating from photosystem I and II decreased during nitrogen starvation, but no alteration in subcellular chlorophyll localization was found. Lastly, we observed differential rod and core pigment responses to nitrogen deprivation, suggesting that PBS complexes undergo a stepwise degradation process.« less

Population-level coordination of pigment response in individual cyanobacterial cells under altered nitrogen levels

DOE PAGES

Murton, Jaclyn; Nagarajan, Aparna; Nguyen, Amelia Y.; ...

2017-07-21

Cyanobacterial phycobilisome (PBS) pigment-protein complexes harvest light and transfer the energy to reaction centers. Previous ensemble studies have shown that cyanobacteria respond to changes in nutrient availability by modifying the structure of PBS complexes, but this process has not been visualized for individual pigments at the single-cell level due to spectral overlap. We characterized the response of four key photosynthetic pigments to nitrogen depletion and repletion at the subcellular level in individual, live Synechocystis sp. PCC 6803 cells using hyperspectral confocal fluorescence microscopy and multivariate image analysis. Our results revealed that PBS degradation and re-synthesis comprise a rapid response tomore » nitrogen fluctuations, with coordinated populations of cells undergoing pigment modifications. Chlorophyll fluorescence originating from photosystem I and II decreased during nitrogen starvation, but no alteration in subcellular chlorophyll localization was found. Lastly, we observed differential rod and core pigment responses to nitrogen deprivation, suggesting that PBS complexes undergo a stepwise degradation process.« less

The carbon bonus of organic nitrogen enhances nitrogen use efficiency of plants.

PubMed

Franklin, Oskar; Cambui, Camila Aguetoni; Gruffman, Linda; Palmroth, Sari; Oren, Ram; Näsholm, Torgny

2017-01-01

The importance of organic nitrogen (N) for plant nutrition and productivity is increasingly being recognized. Here we show that it is not only the availability in the soil that matters, but also the effects on plant growth. The chemical form of N taken up, whether inorganic (such as nitrate) or organic (such as amino acids), may significantly influence plant shoot and root growth, and nitrogen use efficiency (NUE). We analysed these effects by synthesizing results from multiple laboratory experiments on small seedlings (Arabidopsis, poplar, pine and spruce) based on a tractable plant growth model. A key point is that the carbon cost of assimilating organic N into proteins is lower than that of inorganic N, mainly because of its carbon content. This carbon bonus makes it more beneficial for plants to take up organic than inorganic N, even when its availability to the roots is much lower - up to 70% lower for Arabidopsis seedlings. At equal growth rate, root:shoot ratio was up to three times higher and nitrogen productivity up to 20% higher for organic than inorganic N, which both are factors that may contribute to higher NUE in crop production. © 2016 The Authors Plant, Cell & Environment Published by John Wiley & Sons Ltd.

Diamonds from Orapa Mine show a clear subduction signature in SIMS stable isotope data

NASA Astrophysics Data System (ADS)

Chinn, Ingrid L.; Perritt, Samantha H.; Stiefenhofer, Johann; Stern, Richard A.

2018-05-01

Spatially resolved analyses reveal considerable isotopic heterogeneity within and among diamonds ranging in size from 0.15 to 4.75 mm from the Orapa Mine, Botswana. The isotopic data are interpreted in conjunction with nitrogen aggregation state data and growth zone relationships from cathodoluminescence images. The integrated information confirms that a distinct diamond growth event (with low IaAB nitrogen aggregation states, moderately high nitrogen contents and δ13C and δ15N values compatible with average mantle values) is younger than the dominant population(s) of Type IaAB diamonds and cores of composite diamonds with more negative and positive δ13C and δ15N values, respectively. A significant proportion of the older diamond generation has high nitrogen contents, well outside the limit sector relationship, and these diamonds are likely to reflect derivation from subducted organic matter. Diamonds with low δ13C values combined with high nitrogen contents and positive δ15N values have not been previously widely recognised, even in studies of diamonds from Orapa. This may have been caused by prior analytical bias towards inclusion-bearing diamonds that are not necessarily representative of the entire range of diamond populations, and because of average measurements from heterogeneous diamonds measured by bulk combustion methods. Two distinct low nitrogen/Type II microdiamond populations were recognised that do not appear to continue into the macrodiamond sizes in the samples studied. Other populations, e.g. those containing residual singly-substituted nitrogen defects, range in size from small microdiamonds to large macrodiamonds. The total diamond content of the Orapa kimberlite thus reflects a complex assortment of multiple diamond populations.

Influence of composted dairy manure and perennial forage on soil carbon and nitrogen fractions during transition into organic management

USDA-ARS?s Scientific Manuscript database

Composted dairy manure (CDM) is among the management practices used in transitioning from a conventional to an organic agricultural system. The objectives of this study are to evaluate the impact of several organic nitrogen (N) sources on: (i) soil organic C (SOC) and soil total N (STN) content; (ii...

[Distribution of soil organic carbon, total nitrogen, total phosphorus and water stable aggregates of cropland with different soil textures on the Loess Plateau, Northwest China].

PubMed

Ge, Nan Nan; Shi, Yun; Yang, Xian Long; Zhang, Qing Yin; Li, Xue Zhang; Jia, Xiao Xu; Shao, Ming An; Wei, Xiao Rong

2017-05-18

In this study, combined with field investigation and laboratory analyses, we assessed the distribution of soil organic carbon, nitrogen, phosphorous contents and their stoichiometric ratios, and the distribution of soil water stable aggregates along a soil texture gradient in the cropland of the Loess Plateau to understand the effect of soil texture and the regulation of soil aggregates on soil fertility in cropland. The results showed that, with the change from fine soils to coarse soils along the texture gradient (loam clay→ clay loam→ sandy loam), the contents of macroaggregates, organic carbon, nitrogen, phosphorous and their stoichiometric ratios decreased, while pH value and microaggregates content showed an opposite changing pattern. The contents of macroaggregates, organic carbon, nitrogen, phosphorous, and C/P and N/P were significantly increased, but pH value and microaggregates content were significantly decreased with increasing the soil clay content. Furthermore, the contents of organic carbon, nitrogen, phosphorous, and C/P and N/P increased with the increase of macroaggregates content. These results indicated that soil fertility in croplands at a regional scale was mainly determined by soil texture, and was regulated by soil macroaggregates.

The physiological kinetics of nitrogen and the prevention of decompression sickness.

PubMed

Doolette, D J; Mitchell, S J

2001-01-01

Decompression sickness (DCS) is a potentially crippling disease caused by intracorporeal bubble formation during or after decompression from a compressed gas underwater dive. Bubbles most commonly evolve from dissolved inert gas accumulated during the exposure to increased ambient pressure. Most diving is performed breathing air, and the inert gas of interest is nitrogen. Divers use algorithms based on nitrogen kinetic models to plan the duration and degree of exposure to increased ambient pressure and to control their ascent rate. However, even correct execution of dives planned using such algorithms often results in bubble formation and may result in DCS. This reflects the importance of idiosyncratic host factors that are difficult to model, and deficiencies in current nitrogen kinetic models. Models describing the exchange of nitrogen between tissues and blood may be based on distributed capillary units or lumped compartments, either of which may be perfusion- or diffusion-limited. However, such simplistic models are usually poor predictors of experimental nitrogen kinetics at the organ or tissue level, probably because they fail to account for factors such as heterogeneity in both tissue composition and blood perfusion and non-capillary exchange mechanisms. The modelling of safe decompression procedures is further complicated by incomplete understanding of the processes that determine bubble formation. Moreover, any formation of bubbles during decompression alters subsequent nitrogen kinetics. Although these factors mandate complex resolutions to account for the interaction between dissolved nitrogen kinetics and bubble formation and growth, most decompression schedules are based on relatively simple perfusion-limited lumped compartment models of blood: tissue nitrogen exchange. Not surprisingly, all models inevitably require empirical adjustment based on outcomes in the field. Improvements in the predictive power of decompression calculations are being achieved using probabilistic bubble models, but divers will always be subject to the possibility of developing DCS despite adherence to prescribed limits.

Thermal and biological evolution of Fe(III)-Sulfanilamide complexes synthesized by green strategy

NASA Astrophysics Data System (ADS)

Prajapat, Garima; Rathore, Uma; Gupta, Rama; Bhojak, N.

2018-05-01

Sulfonamides belong to a category of sulfadrugs, that are widely used as antibiotic medicines. Their metal complexes, also called Metallodrugs, are known to have diverse pharmacological applications and are significantly used as therapeutic agents for treatment of several human diseases. Fe(III) complexes of two sulfonamides, namely Sulfanilamide and Sulfadiazine have been synthesized by the method of Microwave Assisted Organic Synthesis (MAOS), using acetone as solvent medium. Presence of excellent donor atoms such as N and O, induce these drugs to exhibit a chelating behavior with the metal ion, and to act as bidentate ligands. Both the complexes were found to have four coordinated, tetrahedral geometry with one molecule of water of crystallisation. Thermal decomposition studies were carried out in an inert nitrogen atmosphere by Thermogravimetric (TGA) and Derivative Thermogravimetric (DTA) analysis. Interpretation of thermograms have been done to evaluate various kinetic and thermodynamic parameters, using integral method of Coats and Redfern. The antibacterial activity for both complexes have been screened against E.coli, S. aureus and B. subtilis.

Investigations into the synthesis and fluorescence properties of Eu(III), Tb(III), Sm(III) and Gd(III) complexes of a novel bis- β-diketone-type ligand

NASA Astrophysics Data System (ADS)

Luo, Yi-Ming; Chen, Zhe; Tang, Rui-Ren; Xiao, Lin-Xiang; Peng, Hong-Jian

2008-02-01

A novel bis- β-diketon ligand, 1,1'-(2,6-bispyridyl)bis-3-phenyl-1,3-propane-dione (L), was designed and synthesized and its complexes with Eu(III), Tb(III), Sm(III) and Gd(III) ions were successfully prepared. The ligand and the corresponding metal complexes were characterized by elemental analysis, and infrared, mass and proton nuclear magnetic resonance spectroscopy. Analysis of the IR spectra suggested that each of the lanthanide metal ions coordinated to the ligand via the carbonyl oxygen atoms and the nitrogen atom of the pyridine ring. The fluorescence properties of these complexes in solid state were investigated and it was discovered that all of the lanthanide ions could be sensitized by the ligand (L) to some extent. In particular, the Tb(III) complex was an excellent green-emitter and would be a potential candidate material for applications in organic light-emitting devices (OLEDs) and medical diagnosis.

Comparative Genomic Analysis of N2-Fixing and Non-N2-Fixing Paenibacillus spp.: Organization, Evolution and Expression of the Nitrogen Fixation Genes

PubMed Central

Xie, Jian-Bo; Du, Zhenglin; Bai, Lanqing; Tian, Changfu; Zhang, Yunzhi; Xie, Jiu-Yan; Wang, Tianshu; Liu, Xiaomeng; Chen, Xi; Cheng, Qi; Chen, Sanfeng; Li, Jilun

2014-01-01

We provide here a comparative genome analysis of 31 strains within the genus Paenibacillus including 11 new genomic sequences of N2-fixing strains. The heterogeneity of the 31 genomes (15 N2-fixing and 16 non-N2-fixing Paenibacillus strains) was reflected in the large size of the shell genome, which makes up approximately 65.2% of the genes in pan genome. Large numbers of transposable elements might be related to the heterogeneity. We discovered that a minimal and compact nif cluster comprising nine genes nifB, nifH, nifD, nifK, nifE, nifN, nifX, hesA and nifV encoding Mo-nitrogenase is conserved in the 15 N2-fixing strains. The nif cluster is under control of a σ70-depedent promoter and possesses a GlnR/TnrA-binding site in the promoter. Suf system encoding [Fe–S] cluster is highly conserved in N2-fixing and non-N2-fixing strains. Furthermore, we demonstrate that the nif cluster enabled Escherichia coli JM109 to fix nitrogen. Phylogeny of the concatenated NifHDK sequences indicates that Paenibacillus and Frankia are sister groups. Phylogeny of the concatenated 275 single-copy core genes suggests that the ancestral Paenibacillus did not fix nitrogen. The N2-fixing Paenibacillus strains were generated by acquiring the nif cluster via horizontal gene transfer (HGT) from a source related to Frankia. During the history of evolution, the nif cluster was lost, producing some non-N2-fixing strains, and vnf encoding V-nitrogenase or anf encoding Fe-nitrogenase was acquired, causing further diversification of some strains. In addition, some N2-fixing strains have additional nif and nif-like genes which may result from gene duplications. The evolution of nitrogen fixation in Paenibacillus involves a mix of gain, loss, HGT and duplication of nif/anf/vnf genes. This study not only reveals the organization and distribution of nitrogen fixation genes in Paenibacillus, but also provides insight into the complex evolutionary history of nitrogen fixation. PMID:24651173

Isotopic patterns in caps and stipes in sporocarps reveal patterns of organic nitrogen use by ectomycorrhizal fungi

NASA Astrophysics Data System (ADS)

Hobbie, Erik; Ouimette, Andrew; Chen, Janet

2016-04-01

Current ecosystem models use inorganic nitrogen as the currency of nitrogen acquisition by plants. However, many trees may gain access to otherwise unavailable soil resources, such as soil organic nitrogen, through their symbioses with ectomycorrhizal fungi, and this pathway of nitrogen acquisition may therefore be important in understanding plant responses to environmental change. Different functional groups of ectomycorrhizal fungi vary in their ability to enzymatically access protein and other soil resources. Such fungal parameters as hyphal hydrophobicity, the presence of rhizomorphs (long-distance transport structures), and exploration strategies (e.g., short-distance versus long-distance, mat formation) correspond with how fungi interact with and explore the environment, and the proportions of different exploration types present will shift along environmental gradients such as nitrogen availability. Isotopic differences between caps and stipes may provide a means to test for organic nitrogen use, since caps and stipes differ in δ13C and δ15N as a result of variable proportions of protein and other classes of compounds, and protein should differ isotopically among de novo synthesis, litter sources, and soil sources. Here, we propose that (1) isotopic differences between caps and stipes could be related to organic nitrogen uptake and to the δ13C and δ15N values of different pools of soil-derived or de novo-synthesized amino acids; (2) these isotopic differences will reflect greater acquisition of soil-derived organic nitrogen by exploration types of greater enzymatic capabilities to degrade recalcitrant nitrogen forms, specifically long-distance, medium-distance fringe, and medium-distance mat exploration types. To test these hypotheses, we use a dataset of isotopic values, %N, and %C in 208 cap/stipe samples collected from Oregon, western USA. δ13C differences in caps and stipes in a multiple regression model had an adjusted r2 of 0.292 (p < 0.0001), and were explained best by exploration type (45% of explained variance), the interaction of exploration type and %Ncap-stipe (20%), the interaction of exploration type and %Ncap/stipe (22%), %Ccap-stipe (8%), and %Ncap-stipe (5%). δ15N differences between caps and stipes in a multiple regression model had an adjusted r2 of 0.486 (p < 0.0001), and were explained best by exploration type (47% of explained variance), the interaction of exploration type and %Ncap-stipe (26%), the interaction of exploration type and %Ncap/stipe (14%), %Ncap/stipe (11%),and %Ccap-stipe (2%). We argue that these differences in the 13C and 15N enrichment of caps relative to stipes reflect not only shifts in the proportions of protein and carbohydrates, but also differences in the extent of fluxes and the δ13C and δ15N signatures of soil- and litter-derived organic nitrogen taken up by these fungi. We also propose equations to quantify this uptake. Organic nitrogen from litter (lower δ13C and δ15N) may be incorporated by medium-distance mat, short-distance, and contact exploration types of ectomycorrhizal fungi, whereas long-distance and medium-distance fringe exploration types appeared to incorporate deeper soil organic nitrogen.

Effects of NOx on the molecular composition of secondary organic aerosol formed by the ozonolysis and photooxidation of α-pinene

NASA Astrophysics Data System (ADS)

Park, Jun-Hyun; Babar, Zaeem Bin; Baek, Sun Jong; Kim, Hyun Sik; Lim, Ho-Jin

2017-10-01

The molecular composition of secondary organic aerosol (SOA), obtained from the ozonolysis and photooxidation of α-pinene, was investigated using ultrahigh-resolution Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS) in negative ion mode electrospray ionization (ESI). SOA formation was performed in an indoor smog chamber. The molecular formulae of individual species were identified on the basis of the measured ionic mass using guidelines, such as number of atoms, elemental ratios, and the nitrogen rule. In each of the SOAs obtained, 815-3501 monomeric and oligomeric (mainly dimeric) species were identified below m/z 800. From ozonolysis, mainly 95% of the typical oxygenated species (CHO) were detected, whereas from photooxidation under high NOx conditions, 32% of nitrogen-containing species (CHON) were detected. Several common intense species (e.g., C9H14O6, C10H14O6, C10H16O5, C17H26O7, C19H28O9, C10H15NO8, and C10H15NO9) could be listed as candidate tracers for the conventional tracers for α-pinene SOA. The increased percentage of CHON as a primary effect of NOx on the SOA composition evidently affected other physicochemical parameters, such as elemental ratios (i.e., O/C, H/C, and N/C), the double-bond equivalent (DBE), the carbon oxidation state (OSC), and the organic-mass-to-carbon ratio (OM/OC). The O/C and OM/OC for CHON were greater than those observed for CHO, indicating that nitrogen preferentially exists in the oxidized form (e.g., -ONO2). The complexity of oligomerization was observed in DBE and OM/OC according to the number of carbon atoms.

Stable isotope patterns in micronekton from the Mozambique Channel

NASA Astrophysics Data System (ADS)

Ménard, Frédéric; Benivary, Hermann Doris; Bodin, Nathalie; Coffineau, Nathalie; Le Loc'h, François; Mison, Thomas; Richard, Pierre; Potier, Michel

2014-02-01

We measured the stable carbon (δ13C) and nitrogen (δ15N) isotopic composition of tissues of micronektonic organisms (fishes, squids, crustaceans and gelatinous organisms) collected in the Mozambique Channel during two scientific cruises in 2008 and 2009. The oceanic circulation in the Mozambique Channel is dominated by mesoscale cyclonic and anticyclonic eddies which play a key role in biological processes of less-productive deep-sea ecosystems. We investigated the potential impact of mesoscale features on the δ13C and δ15N values of 32 taxa of micronekton. Fishes, squids, crustaceans and gelatinous organisms encompassed a wide range of isotopic niches, with large overlaps among species. Our results showed that mesoscale features did not really influence the isotopic signatures of the sampled organisms, although cyclonic eddies can occasionally impact the nitrogen signatures of micronekton. We show that δ13C values were intermediate between standard offshore and nearshore signatures, suggesting that pelagic production in the Mozambique Channel could be partly supported by the transport and export of inorganic and organic particles from the Mozambican coast toward the offshore area. Trophic levels calculated from δ15N values ranged from 2.6 to 4.2, showing that micronekton taxa can be tertiary consumers in the Mozambique Channel. Our findings evidenced clusters of micronektonic organisms according to their δ15N or δ13C isotopic signatures, but variations in stable isotope values reflect a complex set of embedded processes linked to physical mesoscale dynamics (rotational dynamics of eddies) and basic biology and ecology of micronektonic organisms (vertical habitat, migration pattern, dietary habits, body length) that are discussed with regard to the stable isotope method based on time-integrated assimilated food.

Regulation of Nitrogen Metabolism by GATA Zinc Finger Transcription Factors in Yarrowia lipolytica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pomraning, Kyle R.; Bredeweg, Erin L.; Baker, Scott E.

ABSTRACT Fungi accumulate lipids in a manner dependent on the quantity and quality of the nitrogen source on which they are growing. In the oleaginous yeastYarrowia lipolytica, growth on a complex source of nitrogen enables rapid growth and limited accumulation of neutral lipids, while growth on a simple nitrogen source promotes lipid accumulation in large lipid droplets. Here we examined the roles of nitrogen catabolite repression and its regulation by GATA zinc finger transcription factors on lipid metabolism inY. lipolytica. Deletion of the GATA transcription factor genesgzf3andgzf2resulted in nitrogen source-specific growth defects and greater accumulation of lipids when the cells weremore » growing on a simple nitrogen source. Deletion ofgzf1, which is most similar to activators of genes repressed by nitrogen catabolite repression in filamentous ascomycetes, did not affect growth on the nitrogen sources tested. We examined gene expression of wild-type and GATA transcription factor mutants on simple and complex nitrogen sources and found that expression of enzymes involved in malate metabolism, beta-oxidation, and ammonia utilization are strongly upregulated on a simple nitrogen source. Deletion ofgzf3results in overexpression of genes with GATAA sites in their promoters, suggesting that it acts as a repressor, whilegzf2is required for expression of ammonia utilization genes but does not grossly affect the transcription level of genes predicted to be controlled by nitrogen catabolite repression. Both GATA transcription factor mutants exhibit decreased expression of genes controlled by carbon catabolite repression via the repressormig1, including genes for beta-oxidation, highlighting the complex interplay between regulation of carbon, nitrogen, and lipid metabolism. IMPORTANCENitrogen source is commonly used to control lipid production in industrial fungi. Here we identified regulators of nitrogen catabolite repression in the oleaginous yeastY. lipolyticato determine how the nitrogen source regulates lipid metabolism. We show that disruption of both activators and repressors of nitrogen catabolite repression leads to increased lipid accumulation via activation of carbon catabolite repression through an as yet uncharacterized method.« less

Social dynamics within decomposer communities lead to nitrogen retention and organic matter build-up in soils

PubMed Central

Kaiser, Christina; Franklin, Oskar; Richter, Andreas; Dieckmann, Ulf

2015-01-01

The chemical structure of organic matter has been shown to be only marginally important for its decomposability by microorganisms. The question of why organic matter does accumulate in the face of powerful microbial degraders is thus key for understanding terrestrial carbon and nitrogen cycling. Here we demonstrate, based on an individual-based microbial community model, that social dynamics among microbes producing extracellular enzymes (‘decomposers') and microbes exploiting the catalytic activities of others (‘cheaters') regulate organic matter turnover. We show that the presence of cheaters increases nitrogen retention and organic matter build-up by downregulating the ratio of extracellular enzymes to total microbial biomass, allowing nitrogen-rich microbial necromass to accumulate. Moreover, increasing catalytic efficiencies of enzymes are outbalanced by a strong negative feedback on enzyme producers, leading to less enzymes being produced at the community level. Our results thus reveal a possible control mechanism that may buffer soil CO2 emissions in a future climate. PMID:26621582

The Response of Nannochloropsis gaditana to Nitrogen Starvation Includes De Novo Biosynthesis of Triacylglycerols, a Decrease of Chloroplast Galactolipids, and Reorganization of the Photosynthetic Apparatus

PubMed Central

Simionato, Diana; Block, Maryse A.; La Rocca, Nicoletta; Jouhet, Juliette; Maréchal, Eric

2013-01-01

Microalgae of the genus Nannochloropsis are capable of accumulating triacylglycerols (TAGs) when exposed to nutrient limitation (in particular, nitrogen [N]) and are therefore considered promising organisms for biodiesel production. Here, after nitrogen removal from the medium, Nannochloropsis gaditana cells showed extensive triacylglycerol accumulation (38% TAG on a dry weight basis). Triacylglycerols accumulated during N deprivation harbored signatures, indicating that they mainly stemmed from freshly synthesized fatty acids, with a small proportion originating from a recycling of membrane glycerolipids. The amount of chloroplast galactoglycerolipids, which are essential for the integrity of thylakoids, decreased, while their fatty acid composition appeared to be unaltered. In starved cells, galactolipids were kept at a level sufficient to maintain chloroplast integrity, as confirmed by electron microscopy. Consistently, N-starved Nannochloropsis cells contained less photosynthetic membranes but were still efficiently performing photosynthesis. N starvation led to a modification of the photosynthetic apparatus with a change in pigment composition and a decrease in the content of all the major electron flow complexes, including photosystem II, photosystem I, and the cytochrome b6f complex. The photosystem II content was particularly affected, leading to the inhibition of linear electron flow from water to CO2. Such a reduction, however, was partially compensated for by activation of alternative electron pathways, such as cyclic electron transport. Overall, these changes allowed cells to modify their energetic metabolism in order to maintain photosynthetic growth. PMID:23457191

Polymeric Cd(II), trinuclear and mononuclear Ni(II) complexes of 5-methyl-4-phenyl-1,2,4-triazole-3-thione: Synthesis, structural characterization, thermal behaviour, fluorescence properties and antibacterial activity

NASA Astrophysics Data System (ADS)

Bharty, M. K.; Paswan, S.; Dani, R. K.; Singh, N. K.; Sharma, V. K.; Kharwar, R. N.; Butcher, R. J.

2017-02-01

Syntheses of a polymeric Cd(II) complex, [Cd(mptt)2]n (1), a trinuclear Ni(II) complex, [Ni3(μ-mptt)4(μ-H2O)2(H2O)2(ttfa)2]·3H2O (2) and a mononuclear Ni(II) complex [Ni(mptt)2(en)2] (3) have been performed using the ligand 5-methyl-4-phenyl-1,2,4-triazole-3-thione (Hmptt) and nickel(II)/cadmium(II) salts {ttfa = thenoyltrifluroacetonate). The ligand and the complexes have been characterized by various physicochemical methods in addition to their single crystal X-ray structure. The Cd centre in complex 1 adopts a distorted tetrahedral geometry with one sulfur atom and two mptt ligands provide three nitrogen atoms from three triazole units. The sulfur atom of the ligand binds covalently and overall the ligand acts as uninigative N,S/N,N bidentate moiety. The polymeric structure of complex 1 results from the N atoms of the neighboring triazole units coordinating with the Cd(II) centre. The three Ni(II) centres in the trinuclear Ni(II) complex 2 form a linear arrangement and all have six coordinated arrangements. The middle Ni(II) binds with four deprotonated triazole ring nitrogens and two water molecules form two bridges. The terminal Ni(II) centres bind through two thenoyl oxygens, two triazole nitrogens and water molecules that formed bridges with the middle Ni centre. In complex 3, the nickel(II) centre is covalently bonded through two deprotonated triazole ring nitrogens from two ligand moieties and other four sites are occupied by four nitrogens from two bidentate en ligands. Thermogravimetric analyses (TGA) of the complexes indicated for NiO as the final residue. The bioefficacy of the ligand and complexes 2 and 3 have been examined against the growth of bacteria to evaluate their anti-microbial potential. Complex 2 showed high antibacterial activity as compared to the ligand and complex 3. Complexes 1, 2 and 3 are fluorescent materials with maximum emissions at 425, 421 and 396 nm at an excitation wavelength of 323, 348 and 322 nm, respectively.

Nitrogen-responsive genes are differentially regulated in planta during Fusarium oxyspsorum f. sp. lycopersici infection.

PubMed

Divon, Hege H; Rothan-Denoyes, Beatrice; Davydov, Olga; DI Pietro, Antonio; Fluhr, Robert

2005-07-01

SUMMARY Nitrogen is an essential growth component whose availability will limit microbial spread, and as such it serves as a key control point in dictating an organism's adaptation to various environments. Little is known about fungal nutrition in planta. To enhance our understanding of this process we examined the transcriptional adaptation of Fusarium oxysporum f. sp. lycopersici, the causal agent for vascular wilt in tomato, during nutritional stress and plant colonization. Using RT-PCR and microarray technology we compared fungal gene expression in planta to axenic nitrogen starvation culture. Several expressed sequence tags, representing at least four genes, were identified that are concomitantly induced during nitrogen starvation and in planta growth. Three of these genes show similarity to a general amino acid permease, a peptide transporter and an uricase, all functioning in organic nitrogen acquisition. We further show that these genes represent a distinguishable subset of the nitrogen-responsive transcripts that respond to amino acids commonly available in the plant. Our results indicate that nitrogen starvation partially mimics in planta growth conditions, and further suggest that minute levels of organic nitrogen sources dictate the final outcome of fungal gene expression in planta. The nature of the identified transcripts suggests modes of nutrient uptake and survival for Fusarium during colonization.

Biogeochemical cycling and phyto- and bacterioplankton communities in a large and shallow tropical lagoon (Términos Lagoon, Mexico) under 2009-2010 El Niño Modoki drought conditions

NASA Astrophysics Data System (ADS)

Conan, Pascal; Pujo-Pay, Mireille; Agab, Marina; Calva-Benítez, Laura; Chifflet, Sandrine; Douillet, Pascal; Dussud, Claire; Fichez, Renaud; Grenz, Christian; Gutierrez Mendieta, Francisco; Origel-Moreno, Montserrat; Rodríguez-Blanco, Arturo; Sauret, Caroline; Severin, Tatiana; Tedetti, Marc; Torres Alvarado, Rocío; Ghiglione, Jean-François

2017-03-01

The 2009-2010 period was marked by an episode of intense drought known as the El Niño Modoki event. Sampling of the Términos Lagoon (Mexico) was carried out in November 2009 in order to understand the influence of these particular environmental conditions on organic matter fluxes within the lagoon's pelagic ecosystem and, more specifically, on the relationship between phyto- and bacterioplankton communities. The measurements presented here concern biogeochemical parameters (nutrients, dissolved and particulate organic matter [POM], and dissolved polycyclic aromatic hydrocarbons [PAHs]), phytoplankton (biomass and photosynthesis), and bacteria (diversity and abundance, including PAH degradation bacteria and ectoenzymatic activities). During the studied period, the water column of the Términos Lagoon functioned globally as a sink and, more precisely, as a nitrogen assimilator. This was due to the high production of particulate and dissolved organic matter (DOM), even though exportation of autochthonous matter to the Gulf of Mexico was weak. We found that bottom-up control accounted for a large portion of the variability of phytoplankton productivity. Nitrogen and phosphorus stoichiometry mostly accounted for the heterogeneity in phytoplankton and free-living prokaryote distribution in the lagoon. In the eastern part, we found a clear decoupling between areas enriched in dissolved inorganic nitrogen near the Puerto Real coastal inlet and areas enriched in phosphate (PO4) near the Candelaria estuary. Such a decoupling limited the potential for primary production, resulting in an accumulation of dissolved organic carbon and nitrogen (DOC and DON, respectively) near the river mouths. In the western part of the lagoon, maximal phytoplankton development resulted from bacterial activity transforming particulate organic phosphorus (PP) and dissolved organic phosphorus (DOP) to available PO4 and the coupling between Palizada River inputs of nitrate (NO3) and PP. The Chumpan River contributed only marginally to PO4 inputs due to its very low contribution to overall river inputs. The highest dissolved total PAH concentrations were measured in the El Carmen Inlet, suggesting that the anthropogenic pollution of the zone is probably related to the oil-platform exploitation activities in the shallow waters of the southern of the Gulf of Mexico. We also found that a complex array of biogeochemical and phytoplanktonic parameters were the driving force behind the geographical distribution of bacterial community structure and activities. Finally, we showed that nutrients brought by the Palizada River supported an abundant bacterial community of PAH degraders, which are of significance in this important oil-production zone.

Perspectives to breed for improved baking quality wheat varieties adapted to organic growing conditions.

PubMed

Osman, Aart M; Struik, Paul C; van Bueren, Edith T Lammerts

2012-01-30

Northwestern European consumers like their bread to be voluminous and easy to chew. These attributes require a raw material that is rich in protein with, among other characteristics, a suitable ratio between gliadins and glutenins. Achieving this is a challenge for organic growers, because they lack cultivars that can realise high protein concentrations under the relatively low and variable availability of nitrogen during the grain-filling phase common in organic farming. Relatively low protein content in wheat grains thus needs to be compensated by a high proportion of high-quality protein. Organic farming therefore needs cultivars with genes encoding for optimal levels of glutenins and gliadins, a maximum ability for nitrogen uptake, a large storage capacity of nitrogen in the biomass, an adequate balance between vegetative and reproductive growth, a high nitrogen translocation efficiency for the vegetative parts into the grains during grain filling and an efficient conversion of nitrogen into high-quality proteins. In this perspective paper the options to breed and grow such varieties are discussed. Copyright © 2011 Society of Chemical Industry.

Energy transfer in Anabaena variabilis filaments adapted to nitrogen-depleted and nitrogen-enriched conditions studied by time-resolved fluorescence.

PubMed

Onishi, Aya; Aikawa, Shimpei; Kondo, Akihiko; Akimoto, Seiji

2017-09-01

Nitrogen is among the most important nutritious elements for photosynthetic organisms such as plants, algae, and cyanobacteria. Therefore, nitrogen depletion severely compromises the growth, development, and photosynthesis of these organisms. To preserve their integrity under nitrogen-depleted conditions, filamentous nitrogen-fixing cyanobacteria reduce atmospheric nitrogen to ammonia, and self-adapt by regulating their light-harvesting and excitation energy-transfer processes. To investigate the changes in the primary processes of photosynthesis, we measured the steady-state absorption and fluorescence spectra and time-resolved fluorescence spectra (TRFS) of whole filaments of the nitrogen-fixing cyanobacterium Anabaena variabilis at 77 K. The filaments were grown in standard and nitrogen-free media for 6 months. The TRFS were measured with a picosecond time-correlated single photon counting system. Despite the phycobilisome degradation, the energy-transfer paths within phycobilisome and from phycobilisome to both photosystems were maintained. However, the energy transfer from photosystem II to photosystem I was suppressed and a specific red chlorophyll band appeared under the nitrogen-depleted condition.

[Release and supplement of carbon, nitrogen and phosphorus from jellyfish (Nemopilema nomurai) decomposition in seawater].

PubMed

Qu, Chang-feng; Song, Jin-ming; Li, Ning; Li, Xue-gang; Yuan, Hua-mao; Duan, Li-qin

2016-01-01

Abstract: Jellyfish bloom has been increasing in Chinese seas and decomposition after jellyfish bloom has great influences on marine ecological environment. We conducted the incubation of Nemopilema nomurai decomposing to evaluate its effect on carbon, nitrogen and phosphorus recycling of water column by simulated experiments. The results showed that the processes of jellyfish decomposing represented a fast release of biogenic elements, and the release of carbon, nitrogen and phosphorus reached the maximum at the beginning of jellyfish decomposing. The release of biogenic elements from jellyfish decomposition was dominated by dissolved matter, which had a much higher level than particulate matter. The highest net release rates of dissolved organic carbon and particulate organic carbon reached (103.77 ± 12.60) and (1.52 ± 0.37) mg · kg⁻¹ · h⁻¹, respectively. The dissolved nitrogen was dominated by NH₄⁺-N during the whole incubation time, accounting for 69.6%-91.6% of total dissolved nitrogen, whereas the dissolved phosphorus was dominated by dissolved organic phosphorus during the initial stage of decomposition, being 63.9%-86.7% of total dissolved phosphorus and dominated by PO₄³⁻-P during the late stage of decomposition, being 50.4%-60.2%. On the contrary, the particulate nitrogen was mainly in particulate organic nitrogen, accounting for (88.6 ± 6.9) % of total particulate nitrogen, whereas the particulate phosphorus was mainly in particulate. inorganic phosphorus, accounting for (73.9 ±10.5) % of total particulate phosphorus. In addition, jellyfish decomposition decreased the C/N and increased the N/P of water column. These indicated that jellyfish decomposition could result in relative high carbon and nitrogen loads.

Dissolved organic nitrogen (DON) losses from nested artificially drained lowland catchments with contrasting soil types

NASA Astrophysics Data System (ADS)

Tiemeyer, Bärbel; Kahle, Petra; Lennartz, Bernd

2010-05-01

Artificial drainage is a common practice to improve moisture and aeration conditions of agricultural land. It shortens the residence time of water in the soil and may therefore contribute to the degradation of peatlands as well as to the still elevated level of diffuse pollution of surface water bodies, particularly if flow anomalies like preferential flow cause a further acceleration of water and solute fluxes. Especially in the case of nitrate, artificially drained sub-catchments are found to control the catchment-scale nitrate losses. However, it is frequently found that nitrate losses and nitrogen field balances do not match. At the same time, organic fertilizers are commonly applied and, especially in lowland catchments, organic soils have been drained for agricultural use. Thus, the question arises whether dissolved organic nitrogen (DON) forms an important component of the nitrogen losses from artificially drained catchments. However, in contrast to nitrate and even to dissolved organic carbon (DOC), this component is frequently overlooked, especially in nested catchment studies with different soil types and variable land use. Here, we will present data from a hierarchical water quantity and quality measurement programme in the federal state Mecklenburg-Vorpommern (North-Eastern Germany). The monitoring programme in the pleistocene lowland catchment comprises automatic sampling stations at a collector drain outlet (4.2 ha catchment), at a ditch draining arable land on mineral soils (179 ha), at a ditch mainly draining grassland on organic soils (85 ha) and at a brook with a small rural catchment (15.5 km²) of mixed land use and soil types. At all sampling stations, daily to weekly composite samples were taken, while the discharge and the meteorological data were recorded continuously. Water samples were analyzed for nitrate-nitrogen, ammonium-nitrogen and total nitrogen. We will compare two years: 2006/07 was a very wet year (P = 934 mm) with a high summer precipitation, while 2007/08 was considerably drier than average (P = 554 mm). We will present concentrations and losses of all nitrogen fractions and their relationship to the dominating soil type, precipitation characteristics, discharge, and fertilization practice. Furthermore, we will assess whether the determination of DON helps to improve the correlation between nitrogen input and nitrogen losses.

Carbon cycle: Nitrogen's carbon bonus

NASA Astrophysics Data System (ADS)

Janssens, Ivan A.; Luyssaert, Sebastiaan

2009-05-01

Atmospheric deposition of nitrogen can, but does not always, speed up the sequestration of carbon in trees and forest soil. This complexity may arise from the spatial variations in each of the three mechanisms by which nitrogen affects carbon storage.

74. LIQUID NITROGEN TANK, REGULATOR VALVES, AND PRESSURE GAUGES FOR ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

74. LIQUID NITROGEN TANK, REGULATOR VALVES, AND PRESSURE GAUGES FOR LIQUID NITROGEN PUMPING STATION - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 East, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

Effects of different nitrogen sources on the biogas production - a lab-scale investigation.

PubMed

Wagner, Andreas Otto; Hohlbrugger, Peter; Lins, Philipp; Illmer, Paul

2012-12-20

For anaerobic digestion processes nitrogen sources are poorly investigated although they are known as possible process limiting factors (in the hydrolysis phase) but also as a source for fermentations for subsequent methane production by methanogenic archaea. In the present study different complex and defined nitrogen sources were investigated in a lab-scale experiment in order to study their potential to build up methane. The outcome of the study can be summarised as follows: from complex nitrogen sources yeast extract and casamino acids showed the highest methane production with approximately 600 ml methane per mole of nitrogen, whereas by the use of skim milk no methane production could be observed. From defined nitrogen sources L-arginine showed the highest methane production with almost 1400 ml methane per mole of nitrogen. Moreover it could be demonstrated that the carbon content and therefore C/N-ratio has only minor influence for the methane production from the used substrates. Copyright © 2011 Elsevier GmbH. All rights reserved.

Trans influence on the rate of reductive elimination. Reductive elimination of amines from isomeric arylpalladium amides with unsymmetrical coordination spheres.

PubMed

Yamashita, Makoto; Cuevas Vicario, Jose V; Hartwig, John F

2003-12-31

To determine the trans effect on the rates of reductive eliminations from arylpalladium(II) amido complexes, the reactions of arylpalladium amido complexes bearing symmetrical and unsymmetrical DPPF (DPPF = bis(diphenylphosphino)ferrocene) derivatives were studied. THF solutions of LPd(Ar)(NMeAr') (L = DPPF, DPPF-OMe, DPPF-CF3, DPPF-OMe,Ph, DPPF-Ph,CF3, and DPPF-OMe,CF3; Ar = C6H4-4-CF3; Ar' = C6H4-4-CH3, Ph, and C6H4-4-OMe) underwent C-N bond forming reductive elimination at -15 C to form the corresponding N-methyldiarylamine in high yield. Complexes ligated by symmetrical DPPF derivatives with electron-withdrawing substituents on the DPPF aryl groups underwent reductive elimination faster than complexes ligated by symmetrical DPPF derivatives with electron-donating substituents on the ligand aryl groups. Studies of arylpalladium amido complexes containing unsymmetrical DPPF ligands revealed several trends. First, the complex with the weaker donor trans to nitrogen and the stronger donor trans to the palladium-bound aryl group underwent reductive elimination faster than the regioisomeric complex with the stronger donor trans to nitrogen and the weaker donor trans to the palladium-bound aryl group. Second, the effect of varying the substituents on the phosphorus donor trans to the nitrogen was larger than the effect of varying the substituents on the phosphorus donor trans to the palladium-bound aryl group. Third, the difference in rate between the isomeric arylpalladium amido complexes was similar in magnitude to the differences in rates resulting from conventional variation of substituents on the symmetric phosphine ligands. This result suggests that the geometry of the complex is equal in importance to the donating ability of the dative ligands. The ratio of the differences in rates of reaction of the isomeric complexes was similar to the relative populations of the two geometric isomers. This result and consideration of transition state geometries suggest that the reaction rates are controlled more by substituent effects on ground state stability than on transition state energies. In addition, variation of the aryl group at the amido nitrogen showed systematically that complexes with more electron-donating groups at nitrogen undergo faster reductive elimination than those with less electron-donating groups at nitrogen.

Molecular Determinants of a Symbiotic Chronic Infection

PubMed Central

Gibson, Katherine E.; Kobayashi, Hajime

2009-01-01

Rhizobial bacteria colonize legume roots for the purpose of biological nitrogen fixation. A complex series of events, coordinated by host and bacterial signal molecules, underlie the development of this symbiotic interaction. Rhizobia elicit de novo formation of a novel root organ within which they establish a chronic intracellular infection. Legumes permit rhizobia to invade these root tissues while exerting control over the infection process. Once rhizobia gain intracellular access to their host, legumes also strongly influence the process of bacterial differentiation that is required for nitrogen fixation. Even so, symbiotic rhizobia play an active role in promoting their goal of host invasion and chronic persistence by producing a variety of signal molecules that elicit changes in host gene expression. In particular, rhizobia appear to advocate for their access to the host by producing a variety of signal molecules capable of suppressing a general pathogen defense response. PMID:18983260

Reconciling Mechanistic Hypotheses About Rhizosphere Priming

NASA Astrophysics Data System (ADS)

Cheng, W.

2016-12-01

Rhizosphere priming on soil organic matter decomposition has emerged as a key mechanism regulating biogeochemnical cycling of carbon, nitrogen and other elements from local to global scales. The level of the rhizosphere priming effect on decomposition rates can be comparable to the levels of controls from soil temperature and moisture conditions. However, our understanding on mechanisms responsible for rhizosphere priming remains rudimentary and controversial. The following individual hypotheses have been postulated in the published literature: (1) microbial activation, (2) microbial community succession, (3) aggregate turnover, (4) nitrogen mining, (5) nutrient competition, (6) preferential substrate utilization, and (7) drying-rewetting. Meshing these hypotheses with existing empirical evidence tends to support a general conclusion: each of these 7 hypotheses represents an aspect of the overall rhizosphere priming complex while the relative contribution by each individual aspect varies depending on the actual plant-soil conditions across time and space.

Asymmetric Catalysis with Organic Azides and Diazo Compounds Initiated by Photoinduced Electron Transfer.

PubMed

Huang, Xiaoqiang; Webster, Richard D; Harms, Klaus; Meggers, Eric

2016-09-28

Electron-acceptor-substituted aryl azides and α-diazo carboxylic esters are used as substrates for visible-light-activated asymmetric α-amination and α-alkylation, respectively, of 2-acyl imidazoles catalyzed by a chiral-at-metal rhodium-based Lewis acid in combination with a photoredox sensitizer. This novel proton- and redox-neutral method provides yields of up to 99% and excellent enantioselectivities of up to >99% ee with broad functional group compatibility. Mechanistic investigations suggest that an intermediate rhodium enolate complex acts as a reductive quencher to initiate a radical process with the aryl azides and α-diazo carboxylic esters serving as precursors for nitrogen and carbon-centered radicals, respectively. This is the first report on using aryl azides and α-diazo carboxylic esters as substrates for asymmetric catalysis under photoredox conditions. These reagents have the advantage that molecular nitrogen is the leaving group and sole byproduct in this reaction.

Terpenoid-Alkaloids: Their Biosynthetic Twist of Fate and Total Synthesis.

PubMed

Cherney, Emily C; Baran, Phil S

2011-04-01

Terpenes and alkaloids are ever-growing classes of natural products that provide new molecular structures which inspire chemists and possess a broad range of biological activity. Terpenoid-alkaloids originate from the same prenyl units that construct terpene skeletons. However, during biosynthesis, a nitrogen atom (or atoms) is introduced in the form of β-aminoethanol, ethylamine, or methylamine. Nitrogen incorporation can occur either before, during, or after the cyclase phase. The outcome of this unique biosynthesis is the formation of natural products containing unprecedented structures. These complex structural motifs expose current limitations in organic chemistry, thus providing opportunities for invention. This review focuses on total syntheses of terpenoid-alkaloids and unique issues presented by this class of natural products. More specifically, it examines how these syntheses relate to the way terpenoid-alkaloids are made in Nature. Developments in chemistry that have facilitated these syntheses are emphasized, as well as chemical technology needed to conquer those that evade synthesis.

Molybdenum and Phosphorus Interact to Constrain Asymbiotic Nitrogen Fixation in Tropical Forests

PubMed Central

Wurzburger, Nina; Bellenger, Jean Philippe; Kraepiel, Anne M. L.; Hedin, Lars O.

2012-01-01

Biological di-nitrogen fixation (N2) is the dominant natural source of new nitrogen to land ecosystems. Phosphorus (P) is thought to limit N2 fixation in many tropical soils, yet both molybdenum (Mo) and P are crucial for the nitrogenase reaction (which catalyzes N2 conversion to ammonia) and cell growth. We have limited understanding of how and when fixation is constrained by these nutrients in nature. Here we show in tropical forests of lowland Panama that the limiting element on asymbiotic N2 fixation shifts along a broad landscape gradient in soil P, where Mo limits fixation in P-rich soils while Mo and P co-limit in P-poor soils. In no circumstance did P alone limit fixation. We provide and experimentally test a mechanism that explains how Mo and P can interact to constrain asymbiotic N2 fixation. Fixation is uniformly favored in surface organic soil horizons - a niche characterized by exceedingly low levels of available Mo relative to P. We show that soil organic matter acts to reduce molybdate over phosphate bioavailability, which, in turn, promotes Mo limitation in sites where P is sufficient. Our findings show that asymbiotic N2 fixation is constrained by the relative availability and dynamics of Mo and P in soils. This conceptual framework can explain shifts in limitation status across broad landscape gradients in soil fertility and implies that fixation depends on Mo and P in ways that are more complex than previously thought. PMID:22470462

The catalytic potential of cosmic dust: implications for prebiotic chemistry in the solar nebula and other protoplanetary systems.

PubMed

Hill, Hugh G M; Nuth, Joseph A

2003-01-01

The synthesis of important prebiotic molecules is fundamentally reliant on basic starting ingredients: water, organic species [e.g., methane (CH(4))], and reduced nitrogen compounds [e.g., ammonia (NH(3)), methyl cyanide (CH(3)CN) etc.]. However, modern studies conclude that the primordial Earth's atmosphere was too rich in CO, CO(2), and water to permit efficient synthesis of such reduced molecules as envisioned by the classic Miller-Urey experiment. Other proposed sources of terrestrial nitrogen reduction, like those within submarine vent systems, also seem to be inadequate sources of chemically reduced C-H-O-N compounds. Here, we demonstrate that nebular dust analogs have impressive catalytic properties for synthesizing prebiotic molecules. Using a catalyst analogous to nebular iron silicate condensate, at temperatures ranging from 500K to 900K, we catalyzed both the Fischer-Tropsch conversion of CO and H(2) to methane and water, and the corresponding Haber-Bosch synthesis of ammonia from N(2) and H(2). Remarkably, when CO, N(2), and H(2) were allowed to react simultaneously, these syntheses also yielded nitrogen-containing organics such as methyl amine (CH(3)NH(2)), acetonitrile (CH(3)CN), and N-methyl methylene imine (H(3)CNCH(2)). A fundamental consequence of this work for astrobiology is the potential for a natural chemical pathway to produce complex chemical building blocks of life throughout our own Solar System and beyond.

Use of hydrolysates from Atlantic cod (Gadus morhua L.) viscera as a complex nitrogen source for lactic acid bacteria.

PubMed

Aspmo, Stein Ivar; Horn, Svein Jarle; Eijsink, Vincent G H

2005-07-01

Hydrolysates of cod viscera were tested as an alternative to commonly used complex nitrogen sources (peptones and/or extracts) for the type strains of the lactic acid bacteria Lactococcus lactis, Lactobacillus acidophilus, Lactobacillus helveticus, Lactobacillus casei, Lactobacillus sakei and Pediococcus pentosaceus. Comparative studies with MRS-like media containing different nitrogen sources showed that all the fish hydrolysates performed equally well or better than commercial extracts/peptones for all selected lactic acid bacteria.

Catalytic transformation of dinitrogen into ammonia and hydrazine by iron-dinitrogen complexes bearing pincer ligand

PubMed Central

Kuriyama, Shogo; Arashiba, Kazuya; Nakajima, Kazunari; Matsuo, Yuki; Tanaka, Hiromasa; Ishii, Kazuyuki; Yoshizawa, Kazunari; Nishibayashi, Yoshiaki

2016-01-01

Synthesis and reactivity of iron-dinitrogen complexes have been extensively studied, because the iron atom plays an important role in the industrial and biological nitrogen fixation. As a result, iron-catalyzed reduction of molecular dinitrogen into ammonia has recently been achieved. Here we show that an iron-dinitrogen complex bearing an anionic PNP-pincer ligand works as an effective catalyst towards the catalytic nitrogen fixation, where a mixture of ammonia and hydrazine is produced. In the present reaction system, molecular dinitrogen is catalytically and directly converted into hydrazine by using transition metal-dinitrogen complexes as catalysts. Because hydrazine is considered as a key intermediate in the nitrogen fixation in nitrogenase, the findings described in this paper provide an opportunity to elucidate the reaction mechanism in nitrogenase. PMID:27435503

Infrared spectroscopy and density functional calculations on titanium-dinitrogen complexes

NASA Astrophysics Data System (ADS)

Yoo, Hae-Wook; Choi, Changhyeok; Cho, Soo Gyeong; Jung, Yousung; Choi, Myong Yong

2018-04-01

Titanium-nitrogen complexes were generated by laser ablated titanium (Ti) atoms and N2 gas molecules in this study. These complexes were isolated on the pre-deposited solid Ar matrix on the pre-cooled KBr window (T ∼ 5.4 K), allowing infrared spectra to be measured. Laser ablation experiments with 15N2 isotope provided distinct isotopic shifts in the infrared spectra that strongly implicated the formation of titanium-nitrogen complexes, Ti(NN)x. Density functional theory (DFT) calculations were employed to investigate the molecular structures, electronic ground state, relative energies, and IR frequencies of the anticipated Ti(NN)x complexes. Based on laser ablation experiments and DFT calculations, we were able to assign multiple Ti(NN)x (x = 1-6) species. Particularly, Ti(NN)5 and Ti(NN)6, which have high nitrogen content, may serve as good precursors in preparing polynitrogens.

Mechanisms of nitrogen retention in forest ecosystems - A field experiment

NASA Technical Reports Server (NTRS)

Vitousek, P. M.; Matson, P. A.

1984-01-01

Intensive forest management led to elevated losses of nitrogen from a recently harvested loblolly pine plantation in North Carolina. Measurements of nitrogen-15 retention in the field demonstrated that microbial uptake of nitrogen during the decomposition of residual organic material was the most important process retaining nitrogen. Management practices that remove this material cause increased losses of nitrogen to aquatic ecosystems and the atmosphere.

Unraveling the molecular mechanisms of nitrogenase conformational protection against oxygen in diazotrophic bacteria.

PubMed

Lery, Letícia M S; Bitar, Mainá; Costa, Mauricio G S; Rössle, Shaila C S; Bisch, Paulo M

2010-12-22

G. diazotrophicus and A. vinelandii are aerobic nitrogen-fixing bacteria. Although oxygen is essential for the survival of these organisms, it irreversibly inhibits nitrogenase, the complex responsible for nitrogen fixation. Both microorganisms deal with this paradox through compensatory mechanisms. In A. vinelandii a conformational protection mechanism occurs through the interaction between the nitrogenase complex and the FeSII protein. Previous studies suggested the existence of a similar system in G. diazotrophicus, but the putative protein involved was not yet described. This study intends to identify the protein coding gene in the recently sequenced genome of G. diazotrophicus and also provide detailed structural information of nitrogenase conformational protection in both organisms. Genomic analysis of G. diazotrophicus sequences revealed a protein coding ORF (Gdia0615) enclosing a conserved "fer2" domain, typical of the ferredoxin family and found in A. vinelandii FeSII. Comparative models of both FeSII and Gdia0615 disclosed a conserved beta-grasp fold. Cysteine residues that coordinate the 2[Fe-S] cluster are in conserved positions towards the metallocluster. Analysis of solvent accessible residues and electrostatic surfaces unveiled an hydrophobic dimerization interface. Dimers assembled by molecular docking presented a stable behaviour and a proper accommodation of regions possibly involved in binding of FeSII to nitrogenase throughout molecular dynamics simulations in aqueous solution. Molecular modeling of the nitrogenase complex of G. diazotrophicus was performed and models were compared to the crystal structure of A. vinelandii nitrogenase. Docking experiments of FeSII and Gdia0615 with its corresponding nitrogenase complex pointed out in both systems a putative binding site presenting shape and charge complementarities at the Fe-protein/MoFe-protein complex interface. The identification of the putative FeSII coding gene in G. diazotrophicus genome represents a large step towards the understanding of the conformational protection mechanism of nitrogenase against oxygen. In addition, this is the first study regarding the structural complementarities of FeSII-nitrogenase interactions in diazotrophic bacteria. The combination of bioinformatic tools for genome analysis, comparative protein modeling, docking calculations and molecular dynamics provided a powerful strategy for the elucidation of molecular mechanisms and structural features of FeSII-nitrogenase interaction.

Anaerobic Digestion.

PubMed

Liebetrau, Jan; Sträuber, Heike; Kretzschmar, Jörg; Denysenko, Velina; Nelles, Michael

2017-04-09

The term anaerobic digestion usually refers to the microbial conversion of organic material to biogas, which mainly consists of methane and carbon dioxide. The technical application of the naturally-occurring process is used to provide a renewable energy carrier and - as the substrate is often waste material - to reduce the organic matter content of the substrate prior to disposal.Applications can be found in sewage sludge treatment, the treatment of industrial and municipal solid wastes and wastewaters (including landfill gas utilization), and the conversion of agricultural residues and energy crops.For biorefinery concepts, the anaerobic digestion (AD) process is, on the one hand, an option to treat organic residues from other production processes. Concomitant effects are the reduction of organic carbon within the treated substance, the conversion of nitrogen and sulfur components, and the production of an energy-rich gas - the biogas. On the other hand, the multistep conversion of complex organic material offers the possibility of interrupting the conversion chain and locking out intermediates for utilization as basic material within the chemical industry.

Stoichiometry of hydrological C, N, and P losses across climate and geology: An environmental matrix approach across New Zealand primary forests

NASA Astrophysics Data System (ADS)

McGroddy, M. E.; Baisden, W. T.; Hedin, L. O.

2008-03-01

Hydrologic losses can play a key role in regulating ecosystem nutrient balances, particularly in regions where baseline nutrient cycles are not augmented by industrial deposition. We used first-order streams to integrate hydrologic losses at the watershed scale across unpolluted old-growth forests in New Zealand. We employed a matrix approach to resolve how stream water concentrations of dissolved organic carbon (DOC), organic and inorganic nitrogen (DON and DIN), and organic and inorganic phosphorus (DOP and DIP) varied as a function of landscape differences in climate and geology. We found stream water total dissolved nitrogen (TDN) to be dominated by organic forms (medians for DON, 81.3%, nitrate-N, 12.6%, and ammonium-N, 3.9%). The median stream water DOC:TDN:TDP molar ratio of 1050:21:1 favored C slightly over N and P when compared to typical temperate forest foliage ratios. Using the full set of variables in a multiple regression approach explained approximately half of the variability in DON, DOC, and TDP concentrations. Building on this approach we combined a simplified set of variables with a simple water balance model in a regression designed to predict DON export at larger spatial scales. Incorporating the effects of climate and geologic variables on nutrient exports will greatly aid the development of integrated Earth-climate biogeochemical models which are able to take into account multiple element dynamics and complex natural landscapes.

138. LIQUID NITROGEN INSTRUMENT PANEL ON EAST WALL OF LIQUID ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

138. LIQUID NITROGEN INSTRUMENT PANEL ON EAST WALL OF LIQUID NITROGEN CONTROL ROOM (115), LSB (BLDG. 770) - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 West, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

ORGANIC MATTER MANIPULATIONS HAVE LITTLE EFFECT ON GROSS AND NET NITROGEN TRANSFORMATIONS IN TWO TEMPERATE FOREST MINERAL SOILS IN THE USA AND CENTRAL EUROPE

EPA Science Inventory

Soil nitrogen transformations are intricately linked to carbon transformations. We utilized two existing organic matter manipulation sites in western Oregon, USA and Hungary to investigate these linkages. Our questions were: 1) Does the quantity and quality of organic matter af...

Airborne microbial allergens: Impact and risk assessment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Solomon, W.R.

1990-01-01

Despite their evolution in more natural niches, a variety of microorganisms have also successfully colonized man-made interiors. Such adaptable agents require fairly simple carbon and nitrogen sources, in limited amounts, and find these on surfaces and in fluid collections. Available moisture is also a critical permissive factor. Survival and growth indoors are fostered by the presence of stored biogenic materials and by soiling of surfaces with organic films derived from foodstuffs, soaps, volatile hydrocarbons and organic dusts. Commonly, predators such as protozoa, mites, insects and nematodes graze on a variety of established early invaders so that complex mixed populations aremore » common. At the least, bacteria, fungi and their extracellular products regularly coexist on even marginal substrates.« less

Regulation causes nitrogen cycling discontinuities in Mediterranean rivers.

PubMed

von Schiller, Daniel; Aristi, Ibon; Ponsatí, Lídia; Arroita, Maite; Acuña, Vicenç; Elosegi, Arturo; Sabater, Sergi

2016-01-01

River regulation has fundamentally altered large sections of the world's river networks. The effects of dams on the structural properties of downstream reaches are well documented, but less is known about their effect on river ecosystem processes. We investigated the effect of dams on river nutrient cycling by comparing net uptake of total dissolved nitrogen (TDN), phosphorus (TDP) and organic carbon (DOC) in river reaches located upstream and downstream from three reservoir systems in the Ebro River basin (NE Iberian Peninsula). Increased hydromorphological stability, organic matter standing stocks and ecosystem metabolism below dams enhanced the whole-reach net uptake of TDN, but not that of TDP or DOC. Upstream from dams, river reaches tended to be at biogeochemical equilibrium (uptake≈release) for all nutrients, whereas river reaches below dams acted as net sinks of TDN. Overall, our results suggest that flow regulation by dams may cause relevant N cycling discontinuities in rivers. Higher net N uptake capacity below dams could lead to reduced N export to downstream ecosystems. Incorporating these discontinuities could significantly improve predictive models of N cycling and transport in complex river networks. Copyright © 2015. Published by Elsevier B.V.

40 CFR 62.9350 - Identification of plan.

Code of Federal Regulations, 2010 CFR

2010-07-01

... plan was officially submitted as follows: (1) Control of fluoride emissions from phosphate fertilizer... August 9, 1982. (4) Control of metals, acid gases, organic compounds and nitrogen oxide emissions from..., organic compounds, particulates and nitrogen oxide emissions from existing Hospital/Medical/Infectious...

ASN1-encoded asparagine synthetase in floral organs contributes to nitrogen filling in Arabidopsis seeds.

PubMed

Gaufichon, Laure; Marmagne, Anne; Belcram, Katia; Yoneyama, Tadakatsu; Sakakibara, Yukiko; Hase, Toshiharu; Grandjean, Olivier; Clément, Gilles; Citerne, Sylvie; Boutet-Mercey, Stéphanie; Masclaux-Daubresse, Céline; Chardon, Fabien; Soulay, Fabienne; Xu, Xiaole; Trassaert, Marion; Shakiebaei, Maryam; Najihi, Amina; Suzuki, Akira

2017-08-01

Despite a general view that asparagine synthetase generates asparagine as an amino acid for long-distance transport of nitrogen to sink organs, its role in nitrogen metabolic pathways in floral organs during seed nitrogen filling has remained undefined. We demonstrate that the onset of pollination in Arabidopsis induces selected genes for asparagine metabolism, namely ASN1 (At3g47340), GLN2 (At5g35630), GLU1 (At5g04140), AapAT2 (At5g19950), ASPGA1 (At5g08100) and ASPGB1 (At3g16150), particularly at the ovule stage (stage 0), accompanied by enhanced asparagine synthetase protein, asparagine and total amino acids. Immunolocalization confined asparagine synthetase to the vascular cells of the silique cell wall and septum, but also to the outer and inner seed integuments, demonstrating the post-phloem transport of asparagine in these cells to developing embryos. In the asn1 mutant, aberrant embryo cell divisions in upper suspensor cell layers from globular to heart stages assign a role for nitrogen in differentiating embryos within the ovary. Induction of asparagine metabolic genes by light/dark and nitrate supports fine shifts of nitrogen metabolic pathways. In transgenic Arabidopsis expressing promoter Ca MV 35S ::ASN1 fusion, marked metabolomics changes at stage 0, including a several-fold increase in free asparagine, are correlated to enhanced seed nitrogen. However, specific promoter Napin2S ::ASN1 expression during seed formation and a six-fold increase in asparagine toward the desiccation stage result in wild-type seed nitrogen, underlining that delayed accumulation of asparagine impairs the timing of its use by releasing amide and amino nitrogen. Transcript and metabolite profiles in floral organs match the carbon and nitrogen partitioning to generate energy via the tricarboxylic acid cycle, GABA shunt and phosphorylated serine synthetic pathway. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

Fate and Transport of Nitrogen and Carbon with Decomposition of Organic Matter in a Reduced Paddy Field Based on a Coupled Nitrogen-Carbon Cycling Model Using the HP1 Code

NASA Astrophysics Data System (ADS)

Toride, N.; Matsuoka, K.

2017-12-01

In order to predict the fate and transport of nitrogen in a reduced paddy field as a result of decomposition of organic matter, we implemented within the PHREEQC program a modified coupled carbon and nitrogen cycling model based on the LEACHM code. SOM decay processes from organic carbon (Org-C) to biomass carbon (Bio-C), humus carbon (Hum-C), and carbon dioxide (CO2) were described using first-order kinetics. Bio-C was recycled into the organic pool. When oxygen was available in an aerobic condition, O2 was used to produce CO2 as an electron accepter. When O2 availability is low, other electron acceptors such as NO3-, Mn4+, Fe3+, SO42-, were used depending on the redox potential. Decomposition of Org-N was related to the carbon cycle using the C/N ratio. Mineralization and immobilization were determined based on available NH4-N and the nitrogen demand for the formation of biomass and humus. Although nitrification was independently described with the first-order decay process, denitrification was linked with the SOM decay since NO3- was an electron accepter for the CO2 production. Proton reactions were coupled with the nitrification from NH4+ to NO3-, and the ammonium generation from NH3 to NH4+. Furthermore, cation and anion exchange reactions were included with the permanent negative charges and the pH dependent variable charges. The carbon and nitrogen cycling model described with PHREEQC was linked with HYDRUS-1D using the HP1 code. Various nitrogen and carbon transport scenarios were demonstrated for the application of organic matter to a saturated paddy soil.

Nitrogen vacancy complexes in nitrogen irradiated metals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Veen, A. van; Westerduin, K.T.; Schut, H.

1996-12-31

Gas desorption and positron annihilation techniques have been employed to study the evolution of nitrogen associated defects in nitrogen irradiated metals: Fe, Ni, Mo and W. Nitrogen in these metals has a rather high affinity to vacancy type defects. The results obtained for low irradiation dose show that substitutional nitrogen (NV; with V = vacancy) is formed. The nitrogen vacancy complex dissociates at temperatures ranging from 350 K for Ni to 900 K for Mo and 1,100 K for W. At high doses defects are formed which can be characterized as nitrogen saturated vacancy clusters. These defect, as observed bymore » helium probing, disappear during annealing for nickel at 800 K, and for Mo at 1,100 K. The direct observation of the desorbing nitrogen for nickel and molybdenum reveals a very fast desorption transient at the dissociation temperature of the clusters. This is the characteristic desorption transient of a small nitride cluster, e.g., by shrinkage with constant rate. For iron the nitrogen desorption is more complicated because of a general background that continuously rises with temperature. With the positron beam technique depth information was obtained for defects in iron and the defect character could be established with the help of the information provided on annihilation with conduction and core electrons of the defect trapped positrons.« less

Comparison of the Organic Composition of Cometary Samples with Residues Formed from the UV Irradiation of Astrophysical Ice Analogs

NASA Technical Reports Server (NTRS)

Milam, S. N.; Nuevo, M.; Sandford, S. A.; Cody, G. D.; Kilcoyne, A. L. D.; Stroud, R. M.; DeGregorio, B. T.

2010-01-01

The NASA Stardust mission successfully collected material from Comet 81P/Wild 2 [1], including authentic cometary grains [2]. X-ray absorption near-edge structure (XANES) spectroscopy analysis of these samples indicates the presence of oxygen-rich and nitrogen-rich organic materials, which contain a broad variety of functional groups (carbonyls, C=C bonds, aliphatic chains, amines, arnides, etc.) [3]. One component of these organics appears to contain very little aromatic carbon and bears some similarity to the organic residues produced by the irradiation of ices of interstellar/cometary composition, Stardust samples were also recently shown to contain glycine, the smallest biological amino acid [4]. Organic residues produced froth the UV irradiation of astrophysical ice analogs are already known to contain a large suite of organic molecules including amino acids [5-7], amphiphilic compounds (fatty acids) [8], and other complex species. This work presents a comparison between XANES spectra measured from organic residues formed in the laboratory with similar data of cometary samples collected by the Stardust mission

[Impacts of Land Use Changes on Soil Light Fraction and Particulate Organic Carbon and Nitrogen in Jinyun Mountain].

PubMed

Lei, Li-guo; Jiang, Chang-sheng; Hao, Qing-ju

2015-07-01

Four land types including the subtropical evergreen broad-leaved forest, sloping farmland, orchard and abandoned land were selected to collect soil samples from 0 to 60 cm depth at the same altitude of sunny slope in the Jinyun Mountain in this study. Soil light fraction organic carbon and nitrogen ( LFOC and LFON), and particulate organic carbon and nitrogen (POC and PON) were determined and the distribution ratios and C/N ratios were calculated. The results showed that the contents of LFOC and LFON decreased significantly by 71. 42% and 38. 46% after the forest was changed into sloping farmland (P <0. 05) but the change was not significant when it was changed into orchard (P >0. 05), while the contents of LFOC and LFON increased significantly by 3. 77 and 1. 38 times after the sloping farmland was changed into abandoned land (P <0. 05). The contents of POC and PON did not vary markedly after the forest was converted into orchard or sloping farmland, while the POC and PON contents increased markedly by 4. 12 and 1. 25 times after the sloping farmland was abandoned. Those above results indicated that abandoned land was easy for active organic carbon and nitrogen accumulation; on the contrary, sloping farmland was easy to lose soil labile carbon and nitrogen. The LFOC and LFON distribution ratios were significantly reduced by 31. 20% and 30. 08%, respectively after the forest was changed into the sloping farmland, and increased by 18. 74% and 20. 33% respectively after the forest was changed into the orchard. Nevertheless, the distribution ratios of LFOC and LFON were changed little by converting the forest into the sloping farmland and orchard. The distribution ratios of LFOC, LFON, POC and PON all increased significantly after the farmland was abandoned (P <0. 05). Those results showed that the activity of soil organic carbon and nitrogen was enhanced after forest reclamation, while reduced after the sloping farmland was abandoned. The ratios of carbon to nitrogen in soil organic matter, light fraction organic matter and particulate organic matter were in the order of abandoned land (12. 93) > forest (8. 53) > orchard (7. 52) > sloping farmland (4. 40), abandoned land (16. 32) > forest (14. 29) > orchard (11. 32) > sloping farmland (7. 60), abandoned land (23. 41) > sloping farmland (13. 85 ) > forest (10. 30) > orchard (9. 64), which indicated that the degree of organic nitrogen mineralization was higher after forest cultivation and lower after the sloping farmland was abandoned.

Organic carbon and nitrogen content associated with colloids and suspended particulates from the Mississippi River and some of its tributaries

USGS Publications Warehouse

Rostad, C.E.; Leenheer, J.A.; Daniel, S.R.

1997-01-01

Suspended material samples were collected at 16 sites along the Mississippi River and some of its tributaries during July-August 1991, October-November 1991, and April-May 1992, and separated into colloid and particulate fractions to determine the organic carbon content of these two fractions of suspended material. Sample collection involved centrifugation to isolate the suspended particulate fraction and ultrafiltration to isolate the colloid fraction. For the first time, particulate and colloid concentrations and organic carbon and nitrogen content were investigated along the entire reach of the Mississippi River from above Minneapolis, Minnesota, to below New Orleans, Louisiana. Organic carbon content of the colloid (15.2 percent) was much higher than organic carbon content of the particulate material (4.8 percent). Carbon/nitrogen ratios of colloid and particulate phases were more similar to ratios for microorganisms than to ratios for soils, humic materials, or plants.Suspended material samples were collected at 16 sites along the Mississippi River and some of its tributaries during July-August 1991, October-November 1991, and April-May 1992, and separated into colloid and particulate fractions to determine the organic carbon content of these two fractions of suspended material. Sample collection involved centrifugation to isolate the suspended particulate fraction and ultrafiltration to isolate the colloid fraction. For the first time, particulate and colloid concentrations and organic carbon and nitrogen content were investigated along the entire reach of the Mississippi River from above Minneapolis, Minnesota, to below New Orleans, Louisiana. Organic carbon content of the colloid (15.2 percent) was much higher than organic carbon content of the particulate material (4.8 percent). Carbon/nitrogen ratios of colloid and particulate phases were more similar to ratios for microorganisms than to ratios for soils, humic materials, or plants.

Effects of in-sewer processes: a stochastic model approach.

PubMed

Vollertsen, J; Nielsen, A H; Yang, W; Hvitved-Jacobsen, T

2005-01-01

Transformations of organic matter, nitrogen and sulfur in sewers can be simulated taking into account the relevant transformation and transport processes. One objective of such simulation is the assessment and management of hydrogen sulfide formation and corrosion. Sulfide is formed in the biofilms and sediments of the water phase, but corrosion occurs on the moist surfaces of the sewer gas phase. Consequently, both phases and the transport of volatile substances between these phases must be included. Furthermore, wastewater composition and transformations in sewers are complex and subject to high, natural variability. This paper presents the latest developments of the WATS model concept, allowing integrated aerobic, anoxic and anaerobic simulation of the water phase and of gas phase processes. The resulting model is complex and with high parameter variability. An example applying stochastic modeling shows how this complexity and variability can be taken into account.

THE ROLE OF NITROGEN IN CHROMOPHORIC AND FLUORESCENT DISSOLVED ORGANIC MATTER FORMATION

EPA Science Inventory

Microbial and photochemical processes affect chromophoric dissolved organic matter (CDOM) dynamics in the ocean. Some evidence suggests that dissolved nitrogen plays a role in CDOM formation, although this has received little systematic attention in marine ecosystems. Coastal sea...

Amoeboid organism solves complex nutritional challenges

PubMed Central

Dussutour, Audrey; Latty, Tanya; Beekman, Madeleine; Simpson, Stephen J.

2010-01-01

A fundamental question in nutritional biology is how distributed systems maintain an optimal supply of multiple nutrients essential for life and reproduction. In the case of animals, the nutritional requirements of the cells within the body are coordinated by the brain in neural and chemical dialogue with sensory systems and peripheral organs. At the level of an insect society, the requirements for the entire colony are met by the foraging efforts of a minority of workers responding to cues emanating from the brood. Both examples involve components specialized to deal with nutrient supply and demand (brains and peripheral organs, foragers and brood). However, some of the most species-rich, largest, and ecologically significant heterotrophic organisms on earth, such as the vast mycelial networks of fungi, comprise distributed networks without specialized centers: How do these organisms coordinate the search for multiple nutrients? We address this question in the acellular slime mold Physarum polycephalum and show that this extraordinary organism can make complex nutritional decisions, despite lacking a coordination center and comprising only a single vast multinucleate cell. We show that a single slime mold is able to grow to contact patches of different nutrient quality in the precise proportions necessary to compose an optimal diet. That such organisms have the capacity to maintain the balance of carbon- and nitrogen-based nutrients by selective foraging has considerable implications not only for our understanding of nutrient balancing in distributed systems but for the functional ecology of soils, nutrient cycling, and carbon sequestration. PMID:20142479

Hierarchically porous silicon–carbon–nitrogen hybrid materials towards highly efficient and selective adsorption of organic dyes

PubMed Central

Meng, Lala; Zhang, Xiaofei; Tang, Yusheng; Su, Kehe; Kong, Jie

2015-01-01

The hierarchically macro/micro-porous silicon–carbon–nitrogen (Si–C–N) hybrid material was presented with novel functionalities of totally selective and highly efficient adsorption for organic dyes. The hybrid material was conveniently generated by the pyrolysis of commercial polysilazane precursors using polydivinylbenzene microspheres as sacrificial templates. Owing to the Van der Waals force between sp2-hybridized carbon domains and triphenyl structure of dyes, and electrostatic interaction between dyes and Si-C-N matrix, it exhibites high adsorption capacity and good regeneration and recycling ability for the dyes with triphenyl structure, such as methyl blue (MB), acid fuchsin (AF), basic fuchsin and malachite green. The adsorption process is determined by both surface adsorption and intraparticle diffusion. According to the Langmuir model, the adsorption capacity is 1327.7 mg·g−1 and 1084.5 mg·g−1 for MB and AF, respectively, which is much higher than that of many other adsorbents. On the contrary, the hybrid materials do not adsorb the dyes with azo benzene structures, such as methyl orange, methyl red and congro red. Thus, the hierarchically porous Si–C–N hybrid material from a facile and low cost polymer-derived strategy provides a new perspective and possesses a significant potential in the treatment of wastewater with complex organic pollutants. PMID:25604334

The stable isotope composition of nitrogen and carbon and elemental contents in modern and fossil seabird guano from Northern Chile - Marine sources and diagenetic effects.

PubMed

Lucassen, Friedrich; Pritzkow, Wolfgang; Rosner, Martin; Sepúlveda, Fernando; Vásquez, Paulina; Wilke, Hans; Kasemann, Simone A

2017-01-01

Seabird excrements (guano) have been preserved in the arid climate of Northern Chile since at least the Pliocene. The deposits of marine organic material in coastal areas potentially open a window into the present and past composition of the coastal ocean and its food web. We use the stable isotope composition of nitrogen and carbon as well as element contents to compare the principal prey of the birds, the Peruvian anchovy, with the composition of modern guano. We also investigate the impact of diagenetic changes on the isotopic composition and elemental contents of the pure ornithogenic sediments, starting with modern stratified deposits and extending to fossil guano. Where possible, 14C systematics is used for age information. The nitrogen and carbon isotopic composition of the marine prey (Peruvian anchovy) of the birds is complex as it shows strong systematic variations with latitude. The detailed study of a modern profile that represents a few years of guano deposition up to present reveals systematic changes in nitrogen and carbon isotopic composition towards heavier values that increase with age, i.e. depth. Only the uppermost, youngest layers of modern guano show compositional affinity to the prey of the birds. In the profile, the simultaneous loss of nitrogen and carbon occurs by degassing, and non-volatile elements like phosphorous and calcium are passively enriched in the residual guano. Fossil guano deposits are very low in nitrogen and low in carbon contents, and show very heavy nitrogen isotopic compositions. One result of the study is that the use of guano for tracing nitrogen and carbon isotopic and elemental composition in the marine food web of the birds is restricted to fresh material. Despite systematic changes during diagenesis, there is little promise to retrieve reliable values of marine nitrogen and carbon signatures from older guano. However, the changes in isotopic composition from primary marine nitrogen isotopic signatures towards very heavy values generate a compositionally unique material. These compositions trace the presence of guano in natural ecosystems and its use as fertilizer in present and past agriculture.

The stable isotope composition of nitrogen and carbon and elemental contents in modern and fossil seabird guano from Northern Chile – Marine sources and diagenetic effects

PubMed Central

Pritzkow, Wolfgang; Rosner, Martin; Sepúlveda, Fernando; Vásquez, Paulina; Wilke, Hans; Kasemann, Simone A.

2017-01-01

Seabird excrements (guano) have been preserved in the arid climate of Northern Chile since at least the Pliocene. The deposits of marine organic material in coastal areas potentially open a window into the present and past composition of the coastal ocean and its food web. We use the stable isotope composition of nitrogen and carbon as well as element contents to compare the principal prey of the birds, the Peruvian anchovy, with the composition of modern guano. We also investigate the impact of diagenetic changes on the isotopic composition and elemental contents of the pure ornithogenic sediments, starting with modern stratified deposits and extending to fossil guano. Where possible, 14C systematics is used for age information. The nitrogen and carbon isotopic composition of the marine prey (Peruvian anchovy) of the birds is complex as it shows strong systematic variations with latitude. The detailed study of a modern profile that represents a few years of guano deposition up to present reveals systematic changes in nitrogen and carbon isotopic composition towards heavier values that increase with age, i.e. depth. Only the uppermost, youngest layers of modern guano show compositional affinity to the prey of the birds. In the profile, the simultaneous loss of nitrogen and carbon occurs by degassing, and non-volatile elements like phosphorous and calcium are passively enriched in the residual guano. Fossil guano deposits are very low in nitrogen and low in carbon contents, and show very heavy nitrogen isotopic compositions. One result of the study is that the use of guano for tracing nitrogen and carbon isotopic and elemental composition in the marine food web of the birds is restricted to fresh material. Despite systematic changes during diagenesis, there is little promise to retrieve reliable values of marine nitrogen and carbon signatures from older guano. However, the changes in isotopic composition from primary marine nitrogen isotopic signatures towards very heavy values generate a compositionally unique material. These compositions trace the presence of guano in natural ecosystems and its use as fertilizer in present and past agriculture. PMID:28594902

Multiple complexes of nitrogen assimilatory enzymes in spinach chloroplasts: possible mechanisms for the regulation of enzyme function.

PubMed

Kimata-Ariga, Yoko; Hase, Toshiharu

2014-01-01

Assimilation of nitrogen is an essential biological process for plant growth and productivity. Here we show that three chloroplast enzymes involved in nitrogen assimilation, glutamate synthase (GOGAT), nitrite reductase (NiR) and glutamine synthetase (GS), separately assemble into distinct protein complexes in spinach chloroplasts, as analyzed by western blots under blue native electrophoresis (BN-PAGE). GOGAT and NiR were present not only as monomers, but also as novel complexes with a discrete size (730 kDa) and multiple sizes (>120 kDa), respectively, in the stromal fraction of chloroplasts. These complexes showed the same mobility as each monomer on two-dimensional (2D) SDS-PAGE after BN-PAGE. The 730 kDa complex containing GOGAT dissociated into monomers, and multiple complexes of NiR reversibly converted into monomers, in response to the changes in the pH of the stromal solvent. On the other hand, the bands detected by anti-GS antibody were present not only in stroma as a conventional decameric holoenzyme complex of 420 kDa, but also in thylakoids as a novel complex of 560 kDa. The polypeptide in the 560 kDa complex showed slower mobility than that of the 420 kDa complex on the 2D SDS-PAGE, implying the assembly of distinct GS isoforms or a post-translational modification of the same GS protein. The function of these multiple complexes was evaluated by in-gel GS activity under native conditions and by the binding ability of NiR and GOGAT with their physiological electron donor, ferredoxin. The results indicate that these multiplicities in size and localization of the three nitrogen assimilatory enzymes may be involved in the physiological regulation of their enzyme function, in a similar way as recently described cases of carbon assimilatory enzymes.

Nitrogen isotopic fractionation during abiotic synthesis of organic solid particles

NASA Astrophysics Data System (ADS)

Kuga, Maïa; Carrasco, Nathalie; Marty, Bernard; Marrocchi, Yves; Bernard, Sylvain; Rigaudier, Thomas; Fleury, Benjamin; Tissandier, Laurent

2014-05-01

The formation of organic compounds is generally assumed to result from abiotic processes in the Solar System, with the exception of biogenic organics on Earth. Nitrogen-bearing organics are of particular interest, notably for prebiotic perspectives but also for overall comprehension of organic formation in the young Solar System and in planetary atmospheres. We have investigated abiotic synthesis of organics upon plasma discharge, with special attention to N isotope fractionation. Organic aerosols were synthesized from N2-CH4 and N2-CO gaseous mixtures using low-pressure plasma discharge experiments, aimed at simulating chemistry occurring in Titan's atmosphere and in the protosolar nebula, respectively. The nitrogen content, the N speciation and the N isotopic composition were analyzed in the resulting organic aerosols. Nitrogen is efficiently incorporated into the synthesized solids, independently of the oxidation degree, of the N2 content of the starting gas mixture, and of the nitrogen speciation in the aerosols. The aerosols are depleted in 15N by 15-25‰ relative to the initial N2 gas, whatever the experimental setup is. Such an isotopic fractionation is attributed to mass-dependent kinetic effect(s). Nitrogen isotope fractionation upon electric discharge cannot account for the large N isotope variations observed among Solar System objects and reservoirs. Extreme N isotope signatures in the Solar System are more likely the result of self-shielding during N2 photodissociation, exotic effect during photodissociation of N2 and/or low temperature ion-molecule isotope exchange. Kinetic N isotope fractionation may play a significant role in the Titan's atmosphere. On the Titan's night side, 15N-depletion resulting from electron driven reactions may counterbalance photo-induced 15N enrichments occurring on the day's side. We also suggest that the low δ15N values of Archaean organic matter (Beaumont and Robert, 1999) are partly the result of abiotic synthesis of organics that occurred at that time, and that the subsequent development of the biosphere resulted in shifts of δ15N towards higher values.

Modeling forest development after fire disturbance: Climate, soil organic layer, and nitrogen jointly affect forest canopy species and long-term ecosystem carbon accumulation in the North American boreal forest

NASA Astrophysics Data System (ADS)

Trugman, A. T.; Fenton, N.; Bergeron, Y.; Xu, X.; Welp, L.; Medvigy, D.

2015-12-01

Soil organic layer dynamics strongly affect boreal forest development after fire. Field studies show that soil organic layer thickness exerts a species-specific control on propagule establishment in the North American boreal forest. On organic soils thicker than a few centimeters, all propagules are less able to recruit, but broadleaf trees recruit less effectively than needleleaf trees. In turn, forest growth controls organic layer accumulation through modulating litter input and litter quality. These dynamics have not been fully incorporated into models, but may be essential for accurate projections of ecosystem carbon storage. Here, we develop a data-constrained model for understanding boreal forest development after fire. We update the ED2 model to include new aspen and black spruce species-types, species-specific propagule survivorship dependent on soil organic layer depth, species-specific litter decay rates, dynamically accumulating moss and soil organic layers, and nitrogen fixation by cyanobacteria associated with moss. The model is validated against diverse observations ranging from monthly to centennial timescales and spanning a climate gradient in Alaska, central Canada, and Quebec. We then quantify differences in forest development that result from changes in organic layer accumulation, temperature, and nitrogen. We find that (1) the model accurately reproduces a range of observations throughout the North American boreal forest; (2) the presence of a thick organic layer results in decreased decomposition and decreased aboveground productivity, effects that can increase or decrease ecosystem carbon uptake depending on location-specific attributes; (3) with a mean warming of 4°C, some forests switch from undergoing succession to needleleaf forests to recruiting multiple cohorts of broadleaf trees, decreasing ecosystem accumulation by ~30% after 300 years; (4) the availability of nitrogen regulates successional dynamics such than broadleaf species are less able to compete with needleleaf trees under low nitrogen regimes. We conclude that a joint regulation between the soil organic layer, temperature, and nitrogen will likely play an important role in influencing boreal forests development after fire in future climates, and should be represented in models.

Effects of alfalfa and organic fertilizer on benzo[a]pyrene dissipation in an aged contaminated soil.

PubMed

Fu, Dengqiang; Teng, Ying; Luo, Yongming; Tu, Chen; Li, Shixing; Li, Zhengao; Christie, Peter

2012-06-01

A climate-controlled pot experiment was conducted to investigate the effects of planting alfalfa and applying organic fertilizer on the dissipation of benzo[a]pyrene from an aged contaminated agricultural soil. Short-term planting of alfalfa inhibited the dissipation of benzo[a]pyrene from the soil by 8.9%, and organic fertilizer enhanced benzo[a]pyrene removal from the soil by 11.6% compared with the unplanted and unfertilized treatments, respectively. No significant interaction was observed between alfalfa and organic fertilizer on benzo[a]pyrene dissipation. Sterilization completely inhibited the removal of benzo[a]pyrene from the soil indicating that its degradation by indigenous microorganisms may have been the main mechanism of dissipation. Furthermore, significant positive relationships were observed between benzo[a]pyrene removal and the contents of soil ammonium nitrogen, nitrate nitrogen, and total mineral nitrogen at the end of the experiment, suggesting that competition between plants and microorganisms for nitrogen may have inhibited benzo[a]pyrene dissipation in the rhizosphere of alfalfa and the addition of organic fertilizer may facilitate microbial degradation of benzo[a]pyrene in the soil.

General Synthesis of Transition-Metal Oxide Hollow Nanospheres/Nitrogen-Doped Graphene Hybrids by Metal-Ammine Complex Chemistry for High-Performance Lithium-Ion Batteries.

PubMed

Chen, Jiayuan; Wu, Xiaofeng; Gong, Yan; Wang, Pengfei; Li, Wenhui; Mo, Shengpeng; Peng, Shengpan; Tan, Qiangqiang; Chen, Yunfa

2018-02-09

We present a general and facile synthesis strategy, on the basis of metal-ammine complex chemistry, for synthesizing hollow transition-metal oxides (Co 3 O 4 , NiO, CuO-Cu 2 O, and ZnO)/nitrogen-doped graphene hybrids, potentially applied in high-performance lithium-ion batteries. The oxygen-containing functional groups of graphene oxide play a prerequisite role in the formation of hollow transition-metal oxides on graphene nanosheets, and a significant hollowing process occurs only when forming metal (Co 2+ , Ni 2+ , Cu 2+ , or Zn 2+ )-ammine complex ions. Moreover, the hollowing process is well correlated with the complexing capacity between metal ions and NH 3 molecules. The significant hollowing process occurs for strong metal-ammine complex ions including Co 2+ , Ni 2+ , Cu 2+ , and Zn 2+ ions, and no hollow structures formed for weak and/or noncomplex Mn 2+ and Fe 3+ ions. Simultaneously, this novel strategy can also achieve the direct doping of nitrogen atoms into the graphene framework. The electrochemical performance of two typical hollow Co 3 O 4 or NiO/nitrogen-doped graphene hybrids was evaluated by their use as anodic materials. It was demonstrated that these unique nanostructured hybrids, in contrast with the bare counterparts, solid transition-metal oxides/nitrogen-doped graphene hybrids, perform with significantly improved specific capacity, superior rate capability, and excellent capacity retention. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

A 25-Year Retrospective Analysis of River Nitrogen Fluxes in the Atchafalaya

NASA Astrophysics Data System (ADS)

Xu, Y.

2005-05-01

Nitrogen enrichment from the upper Mississippi River Basin has been attributed to be the major cause for the hypoxia in the Northern Gulf of Mexico. The hypoxia threatens not only the aquatic ecosystem health but Louisiana's fishery industry directly among other problems. Although fresh water diversion from the lower Mississippi River into the region's wetlands has been considered an alternative means for reducing nitrogen loading, it is largely uncertain how much nitrogen can actually be retained from the overflowing waters in these natural wetlands. Generally, there is a knowledge gap in what tools are available for accurate assessment of nitrogen inflow, outflow and removal potential for the complex and diverse coastal floodplain systems. This study is to seek answers to three critical questions: (1) Does the Atchafalaya River Swamp remove a significant amount of nitrogen from the overflowing water or release more nitrogen into the Gulf than removing it? (2) How seasonally and annually do the nitrogen removal or release rates fluctuate? (3) What are the relationships between the nitrogen removal capacity and the basin's hydrologic conditions such as river stage and discharge? By utilizing river's long-term discharge and water quality data (1978-2002), monthly and annual nitrogen fluxes were quantified, and their relationships with the basin's hydrologic conditions were investigated. A total Kjeldahl nitrogen (TKN) mass input-output balance between the upstream (Simmesport) and downstream (Morgan City and Wax Lake Outlet) locations was established to examine the organic nitrogen removal potential for this largest freshwater swamp basin in North America. The results showed that on average, TKN input into the Atchafalaya was 200,323 Mg yr-1 and TKN output leaving the basin was 145,917 Mg yr-1, resulting in a 27% removal rate of nitrogen. Monthly nitrogen input and output in the basin were highest from March to June (input vs. output: 25,000 vs. 18,000 Mg mon-1) and lowest from August to November (8,000 vs. 6,000 Mg mon-1). There was a large variation in both annual and inter-annual nitrogen removals, and the variability was positively correlated with the amount of inflow water at Simmesport. However, no close relationship between the river inflow and percentage nitrogen removal rate was found. The results gained from this study suggest that regulating the river's inflow will help reduce nitrogen loading of the Mississippi River to the Gulf of Mexico. The in-stream loss of nitrogen indicates that previous studies may have overestimated nitrogen discharge from the Mississippi-Atchafalaya River system. Furthermore, the study found that knowledge on spatial hydrological conditions in the basin is needed to understand nitrogen dynamics in the Atchafalaya River Swamp.

Soil organic carbon and nitrogen accumulation on coal mine spoils reclaimed with maritime pine (Pinus pinaster Aiton) in Agacli-Istanbul.

PubMed

Sever, Hakan; Makineci, Ender

2009-08-01

Mining operations on open coal mines in Agacli-Istanbul have resulted in the destruction of vast amounts of land. To rehabilitate these degraded lands, plantations on this area began in 1988. Twelve tree species were planted, however, the most planted tree species was maritime pine (Pinus pinaster Aiton). This study performed on 14 sample plots randomly selected in maritime pine plantations on coal mine soil/spoils in 2005. Soil samples were taken from eight different soil layers (0-1, 1-3, 3-5, 5-10, 10-20, 20-30, 30-40 and 40-50 cm) into the soil profile. On soil samples; fine soil fraction (<2 mm), soil acidity (pH), organic carbon (C(org)) and total nitrogen (N(t)) contents were investigated, and results were compared statistically among soil layers. As a result, 17 years after plantations, total forest floor accumulation determined as 17,973.20 kg ha(-1). Total nitrogen and organic matter amounts of forest floor were 113.90 and 14,640.92 kg ha(-1) respectively. Among soil layers, the highest levels of organic carbon (1.77%) and total nitrogen (0.096%) and the lowest pH value (pH 5.38) were found in 0-1 cm soil layer, and the variation differs significantly among soil layers. Both organic carbon and total nitrogen content decreased, pH values increased from 0-1 to 5-10 cm layer. In conclusion, according to results obtained maritime pine plantations on coal mine spoils; slow accumulation and decomposition of forest floor undergo simultaneously. Depending on these changes organic carbon and total nitrogen contents increased in upper layer of soil/spoil.

Nitrogen-Bearing, Indigenous Carbonaceous Matter in the Nakhla Mars Meteorite

NASA Technical Reports Server (NTRS)

Thomas-Keprta, K. L.; Clemett, S. J.; Messenger, S.; Rahman, Z.; Gibson, E. K.; Wentworth, S. J.; McKay, D. S.

2017-01-01

We report the identification of discrete assemblages of nitrogen (N)-rich organic matter entrapped within interior fracture surfaces of the martian meteorite Nakhla. Based on context, composition and isotopic measurements this organic matter is of demonstrably martian origin. The presence of N-bearing organic species is of considerable importance to the habitable potential and chemical evolution of the martian regolith.

Nitrogen removal capacity and bacterial community dynamics of a Canon biofilter system at different organic matter concentrations.

PubMed

García-Ruiz, María J; Maza-Márquez, Paula; González-López, Jesús; Osorio, Francisco

2018-02-01

Three Canon bench-scale bioreactors with a volume of 2 L operating in parallel were configured as submerged biofilters. In the present study we investigated the effects of a high ammonium concentration (320 mgNH 4 + · L -1 ) and different concentrations of organic matter (0, 100 and 400 mgCOD·L -1 ) on the nitrogen removal capacity and the bacterial community structure. After 60 days, the Canon biofilters operated properly under concentrations of 0 and 100 mgCOD·L -1 of organic matter, with nitrogen removal efficiencies up to 85%. However, a higher concentration of organic matter (400 mgCOD·L -1 ) produced a partial inhibition of nitrogen removal (68.1% efficiency). The addition of higher concentrations of organic matter a modified the bacterial community structure in the Canon biofilter, increasing the proliferation of heterotrophic bacteria related to the genera of Thauera, Longilinea, Ornatilinea, Thermomarinilinea, unclassified Chlorobiales and Denitratisoma. However, heterotrophic bacteria co-exist with Nitrosomonas and Candidatus Scalindua. Thus, our study confirms the co-existence of different microbial activities (AOB, Anammox and denitrification) and the adaptation of a fixed-biofilm system to different concentrations of organic matter. Copyright © 2017 Elsevier Ltd. All rights reserved.

Sedimentary organic matter in two Spitsbergen fjords: Terrestrial and marine contributions based on carbon and nitrogen contents and stable isotopes composition

NASA Astrophysics Data System (ADS)

Koziorowska, Katarzyna; Kuliński, Karol; Pempkowiak, Janusz

2016-02-01

The aim of this study was to estimate the spatial variability of organic carbon (Corg) and total nitrogen (Ntot) concentrations, Corg/Ntot ratios, stable isotopes of carbon and nitrogen (δ13Corg, δ15Ntot) and the proportions of autochthonous and allochtonous organic matter within recently deposited sediments of two Spitsbergen fjords: the Hornsund and the Adventfjord, which are affected to a different degree by the West Spitsbergen Current. Corg concentrations ranged from 1.38% to 1.98% in the Hornsund and from 1.73% to 3.85% in the Adventfjord. In both fjords the highest Corg concentrations were measured at the innermost stations and they decreased towards the mouths of the fjords. This suggests fresh water runoff to be an important source of organic matter (OM) for surface sediments. The results showed that both fjords differ significantly in terms of sedimentary organic matter characteristics. The samples from the Hornsund, except those from the innermost station in the Brepollen, had relatively low Corg/Ntot ratios, all within a narrow range (from 9.7 to 11.3). On the other hand significantly higher Corg/Ntot ratios, varying within a broad range (from 14.6 to 33.0), were measured in the Adventfjord. The samples from the Hornsund were characterized by higher δ13Corg (from -24.90‰ to -23.87‰) and δ15Ntot (from 3.02‰ to 4.93‰) than those from the Adventfjord (-25.94‰ to -24.69‰ and from 0.71‰ to 4.00‰, respectively). This is attributed to a larger proportion of marine organic matter. Using the two end-member approach proportions of terrestrial organic matter were evaluated. Terrestrial OM contribution for the Adventfjord was in the range of 82-83%, while in case of the Hornsund the results were in the range of 69-75%, with the exception of the innermost part of the fjord, where terrestrial organic matter contribution ranged from 80 to 82%. The strong positive correlation between δ13Corg and δ15Ntot was revealed. This was taken as an indicator that fresh, labile organic matter is the base of the trophic pyramid. The conclusion regarding a more complex food web in the Horsund, based on larger δ15Ntot values, is further substantiated by the larger proportion of autochthonous, labile organic matter found in the Hornsund's sediments.

Effect of management and soil moisture regimes on wetland soils total carbon and nitrogen in Tanzania

NASA Astrophysics Data System (ADS)

Kamiri, Hellen; Kreye, Christine; Becker, Mathias

2013-04-01

Wetland soils play an important role as storage compartments for water, carbon and nutrients. These soils implies various conditions, depending on the water regimes that affect several important microbial and physical-chemical processes which in turn influence the transformation of organic and inorganic components of nitrogen, carbon, soil acidity and other nutrients. Particularly, soil carbon and nitrogen play an important role in determining the productivity of a soil whereas management practices could determine the rate and magnitude of nutrient turnover. A study was carried out in a floodplain wetland planted with rice in North-west Tanzania- East Africa to determine the effects of different management practices and soil water regimes on paddy soil organic carbon and nitrogen. Four management treatments were compared: (i) control (non weeded plots); (ii) weeded plots; (iii) N fertilized plots, and (iv) non-cropped (non weeded plots). Two soil moisture regimes included soil under field capacity (rainfed conditions) and continuous water logging compared side-by-side. Soil were sampled at the start and end of the rice cropping seasons from the two fields differentiated by moisture regimes during the wet season 2012. The soils differed in the total organic carbon and nitrogen between the treatments. Soil management including weeding and fertilization is seen to affect soil carbon and nitrogen regardless of the soil moisture conditions. Particularly, the padddy soils were higher in the total organic carbon under continuous water logged field. These findings are preliminary and a more complete understanding of the relationships between management and soil moisture on the temporal changes of soil properties is required before making informed decisions on future wetland soil carbon and nitrogen dynamics. Keywords: Management, nitrogen, paddy soil, total carbon, Tanzania,

Bulk vs. amino acid stable N isotope estimations of metabolic status and contributions of nitrogen fixation to size-fractionated zooplankton biomass in the subtropical N Atlantic

NASA Astrophysics Data System (ADS)

Mompeán, Carmen; Bode, Antonio; Gier, Elizabeth; McCarthy, Matthew D.

2016-08-01

A comparative analysis of natural abundance of stable N isotopes (δ15N) in individual amino acids and bulk organic matter of size-fractionated plankton revealed the differential impact of nitrogen fixation through the food web in a transect across the subtropical North Atlantic. All δ15N measurements showed low values in the central region, followed by the western zone, while maximum δ15N values were found in the eastern zone. These results were consistent with the prevalence of nitrogen fixation in the central and western zones, and the influence of the west Africa upwelling in the eastern zone. Use of compound-specific amino acid isotope data (CSI-AA) revealed relatively low variability in the impact of diazotrophic nitrogen within the different plankton size fractions, while δ15N of bulk organic matter showed high variability with size. Explicit CSI-AA trophic position estimates showed a small increase with mean plankton size class and varied in a relatively narrow range 1.8-2.5), with the lowest values in the central zone. High correlations between bulk plankton δ15N and individual amino acids (in particular Phe and Thr), as well as reconstructed total protein δ15N values, suggest a set of new relationships that may be important to tracing direct plankton contributions to nitrogen recycling in the ocean, including detrital organic nitrogen pools. Overall, these new results represent the most detailed investigation of CSI-AA data in plankton size classes to date, and indicated a greater importance of diazotrophic N than suggested by concurrent measurements of bulk δ15N, abundance of large nitrogen fixing organisms or nitrogen fixation rates.

Filling a missing link between biogeochemical, climate and ecosystem studies: a global database of atmospheric water-soluble organic nitrogen

NASA Astrophysics Data System (ADS)

Cornell, Sarah

2015-04-01

It is time to collate a global community database of atmospheric water-soluble organic nitrogen deposition. Organic nitrogen (ON) has long been known to be globally ubiquitous in atmospheric aerosol and precipitation, with implications for air and water quality, climate, biogeochemical cycles, ecosystems and human health. The number of studies of atmospheric ON deposition has increased steadily in recent years, but to date there is no accessible global dataset, for either bulk ON or its major components. Improved qualitative and quantitative understanding of the organic nitrogen component is needed to complement the well-established knowledge base pertaining to other components of atmospheric deposition (cf. Vet et al 2014). Without this basic information, we are increasingly constrained in addressing the current dynamics and potential interactions of atmospheric chemistry, climate and ecosystem change. To see the full picture we need global data synthesis, more targeted data gathering, and models that let us explore questions about the natural and anthropogenic dynamics of atmospheric ON. Collectively, our research community already has a substantial amount of atmospheric ON data. Published reports extend back over a century and now have near-global coverage. However, datasets available from the literature are very piecemeal and too often lack crucially important information that would enable aggregation or re-use. I am initiating an open collaborative process to construct a community database, so we can begin to systematically synthesize these datasets (generally from individual studies at a local and temporally limited scale) to increase their scientific usability and statistical power for studies of global change and anthropogenic perturbation. In drawing together our disparate knowledge, we must address various challenges and concerns, not least about the comparability of analysis and sampling methodologies, and the known complexity of composition of ON. We need to discuss and develop protocols that work for diverse research needs. The database will need to be harmonized or merged into existing global N data initiatives. This presentation therefore launches a standing invitation for experts to contribute and share rain and aerosol ON and chemical composition data, and jointly refine the preliminary database structure and metadata requirements for optimal mutual use. Reference: Vet et al. (2014) A global assessment of precipitation chemistry… Atmos Environ 93: 3-100

Nitrogen Species in Soil, Sediment, and Ground Water at a Former Sewage-Treatment Wastewater Lagoon: Naval Air Station Whidbey Island, Island County, Washington

USGS Publications Warehouse

Cox, S.E.; Dinicola, R.S.; Huffman, R.L.

2007-01-01

The potential for contamination of ground water from remnant sewage sludge in re-graded sediments of a deconstructed sewage-treatment lagoon was evaluated. Ground-water levels were measured in temporary drive-point wells, and ground-water samples were collected and analyzed for nutrients and other water-quality characteristics. Composite soil and sediment samples were collected and analyzed for organic carbon and nitrogen species. Multiple lines of evidence, including lack of appreciable organic matter in sediments of the former lagoon, agronomic analysis of nitrogen, the sequestration of nitrogen in the developing soils at the former lagoon, and likely occurrence of peat deposits within the aquifer material, suggest that the potential for substantial additions of nitrogen to ground water beneath the former sewage lagoon resulting from remnant sewage sludge not removed from the former lagoon are small. Concentrations of nitrogen species measured in ground-water samples were small and did not exceed the established U.S. Environmental Protection Agency's maximum contaminant levels for nitrate (10 milligrams per liter). Concentrations of nitrate in ground-water samples were less than the laboratory reporting limit of 0.06 milligram per liter. Seventy to 90 percent of the total nitrogen present in ground water was in the ammonia form with a maximum concentration of 7.67 milligrams per liter. Concentrations of total nitrogen in ground water beneath the site, which is the sum of all forms of nitrogen including nitrate, nitrite, ammonia, and organic nitrogen, ranged from 1.15 to 8.44 milligrams per liter. Thus, even if all forms of nitrogen measured in ground water were converted to nitrate, the combined mass would be less than the maximum contaminant level. Oxidation-reduction conditions in ground water beneath the former sewage lagoon were reducing. Given the abundant supply of ambient organic carbon in the subsurface and in ground water at the former lagoon, any nitrate that may leach from residual sludge and be transported to ground water with recharge is expected to be quickly denitrified or transformed to nitrite and ammonia under the strongly reducing geochemical conditions that are present. Concentrations of organic carbon, the primary constituent of sewage sludge, in sediments of the former sewage lagoon were less than 1 percent, indicating a near absence of organic matter. The amount of total nitrogen present in the sediments at the former sewage lagoon was only about 25 percent of the amount typically present in developed agricultural soils. The lack of substantial carbon and nitrogen in sediments of the former sewage lagoon indicates that surficial sediments of the former lagoon are essentially devoid of residual sewage sludge. The largest concentration of total nitrogen measured in soil samples from the former sewage lagoon (330 milligrams per kilogram) was used to calculate an estimate of the amount of nitrogen that might be leached from residual sewage sludge by recharge. During the first two years following deconstruction of the former sewage lagoon, the concentration of total nitrogen in recharge leachate might exceed 10 milligrams per liter but the recharge leachate would not likely result in substantial increases in the nitrate concentration in ground water to concentrations greater than the drinking-water maximum contaminant level of 10 milligrams per liter.

Cosmic-rays induced Titan tholins and their astrobiological significances

NASA Astrophysics Data System (ADS)

Kobayashi, Kensei; Taniuchi, Toshinori; Hosogai, Tomohiro; Kaneko, Takeo; Takano, Yoshinori; Khare, Bishun; McKay, Chris

Titan is the largest satellite of Saturn. It is quite unique satellite since it has a dense atmosphere composed of nitrogen and methane, and has been sometimes considered as a model of primitive Earth. In Titan atmosphere, a wide variety of organic compounds and mists made of complex organics. Such solid complex organics are often referred to as tholins. A number of laboratory experiments simulating reactions in Titan atmosphere have been conducted. In most of them, ultraviolet light and discharges (simulating actions of electrons in Saturn magnetosphere) were used, which were simulation of the reactions in upper dilute atmosphere of Titan. We examined possible formation of organic compounds in the lower dense atmosphere of Titan, where cosmic rays are major energies. A Mixture of 35 Torr of methane and 665 Torr of nitrogen was irradiated with high-energy protons (3 MeV) from a van de Graaff accelerator (TIT, Japan) or from a Tandem accelerator (TIARA, QUBS, JAEA, Japan). In some experiments, 13 C-labelled methane was used. We also performed plasma discharges in a mixture of methane (10 %) and nitrogen (90 %) to simulate the reactions in the upper atmosphere of Titan. Solid products by proton irradiation and those by plasma discharges are hereafter referred to as PI-tholins and PD-tholins, respectively. The resulting PI-tholins were observed with SEM and AFM. They were characterized by pyrolysis-GC/MS, gel permeation chromatography, FT-IR, etc. Amino acids in PI-and PD-tholins were analyzed by HPLC, GC/MS and MALDI-TOF-MS after acid hydrolysis. 18 O-Labelled water was used in some cases during hydrolysis. Filamentary and/or globular-like structures were observed by SEM and AFM. By pyrolysis-GC/MS of PI-tholins, ammonia and hydrogen cyanide were detected, which was the same as the results obtained in Titan atmosphere during the Huygens mission. A wide variety of amino acids were detected after hydrolysis of both tholins. It was proved that oxygen atoms in the amino acids in PI-tholins were incorporated from water during hydrolysis by the experiments with 18 O-Labelled water. Estimating from the G-values of amino acids and the flux of each energy in Titan atmosphere, it is strongly suggested that amino acid precursors in the form of tholins can be produced mainly in the lower Titan atmosphere by cosmic rays. The tholins containing amino acid precursors could be concentrated on some part of Titan surface by the flow of liquid methane. Amino acid precursors on the surface of Titan is promising targets in future Titan missions.

Degraded Litter Leachates as a Potential Control on Streamwater Nitrogen Dynamics

NASA Astrophysics Data System (ADS)

Hernes, P. J.; O'Geen, A. T.; Dahlgren, R. A.

2008-12-01

Dissolved organic nitrogen (DON) export from catchments is a critical element of overall nutrient cycling. An underlying assumption in most studies investigating DON export is that the source of this DON is from an aged soil organic matter (SOM) pool. However, recent investigations of dissolved organic carbon (DOC) have called into question the idea that dissolved organic matter (DOM) in streams is derived primarily from aged SOM. Evidence includes riverine DOC 14C ages (~5 years) that are much younger than SOM within the catchment as well as the riverine particulate organic matter (POM) pool (decades to 100s of years). Molecular fractionation due to litter leaching and sorption to mineral surfaces can completely account for the degraded molecular signatures observed in dissolved amino acid and dissolved lignin compositions within the DOM pool. Thus it is feasible that a significant portion of exported DON from catchments could come from a younger, less degraded organic matter pool such as litters. To evaluate this potential, we conducted a leaching incubation experiment using litters and degraded "duff" litters (estimated 2-5 yrs of degradation) from four vegetation types (live and blue oak leaves, foothill pine needles, and mixed annual grasses) in an oak woodland ecosystem in the foothills of the Sierra mountains of California. Litters and duffs were placed on sieves within funnels throughout the catchment, and leachates were collected during each rainfall event from Dec. 1, 2006 through May 31, 2007. DON accounted for 50-70% of nitrogen released from litters and DON plus particulate organic nitrogen (PON) constituted >90% of released nitrogen. In contrast, dissolved inorganic nitrogen (DIN) made up 60-80% of released nitrogen in the duff materials with the majority as ammonia. When scaled to the entire watershed, overall yields of dissolved nitrogen in leachates was estimated at 6.0 kg ha-1 for DON, 7.3 kg ha-1 for NH4-N, and 8.8 kg ha-1 for NO3-N, with 90% of the DON and 99% of the DIN derived from the duff materials. Areal yields are up to an order of magnitude greater than reported stream/riverine exports from catchments, indicating that much of this leachate must be degraded or sorbed along hydrologic flowpaths to streams, but that leachates could constitute a significant component of the DON/DOM pool within streams.

The impact of traditional fire management on soil carbon and nitrogen pools in a montane forest, southern Ethiopia

Treesearch

Dong-Gill Kim; Habitamu Taddese; Abrham Belay; Randy Kolka

2016-01-01

We conducted studies to assess the impact of traditional fire management on soil organic carbon and total nitrogen pools. We compared organic carbon and total nitrogen pools in forest floor and mineral soil (0–100-cm depth) in three areas burned by local communities (B) with adjacent unburned areas (UB) (three paired sites; 1, 5 and 9 years since fire; hereafter B1-UB...

Analysis of microbial community and nitrogen transition with enriched nitrifying soil microbes for organic hydroponics.

PubMed

Saijai, Sakuntala; Ando, Akinori; Inukai, Ryuya; Shinohara, Makoto; Ogawa, Jun

2016-06-27

Nitrifying microbial consortia were enriched from bark compost in a water system by regulating the amounts of organic nitrogen compounds and by controlling the aeration conditions with addition of CaCO 3 for maintaining suitable pH. Repeated enrichment showed reproducible mineralization of organic nitrogen via the conversion of ammonium ions ([Formula: see text]) and nitrite ions ([Formula: see text]) into nitrate ions ([Formula: see text]). The change in microbial composition during the enrichment was investigated by PCR-DGGE analysis with a focus on prokaryote, ammonia-oxidizing bacteria, nitrite-oxidizing bacteria, and eukaryote cell types. The microbial transition had a simple profile and showed clear relation to nitrogen ions transition. Nitrosomonas and Nitrobacter were mainly detected during [Formula: see text] and [Formula: see text] oxidation, respectively. These results revealing representative microorganisms acting in each ammonification and nitrification stages will be valuable for the development of artificial simple microbial consortia for organic hydroponics that consisted of identified heterotrophs and autotrophic nitrifying bacteria.

Morphological structure of Gluconacetobacter xylinus cellulose and cellulose-based organic-inorganic composite materials

NASA Astrophysics Data System (ADS)

Smyslov, R. Yu; Ezdakova, K. V.; Kopitsa, G. P.; Khripunov, A. K.; Bugrov, A. N.; Tkachenko, A. A.; Angelov, B.; Pipich, V.; Szekely, N. K.; Baranchikov, A. E.; Latysheva, E.; Chetverikov, Yu O.; Haramus, V.

2017-05-01

Scanning electron microscopy, ultra-small-angle neutron scattering (USANS), small-angle neutron and X-ray scattering (SANS and SAXS), as well as low-temperature nitrogen adsorption, were used in the studies of micro- and mesostructure of polymer matrix prepared from air-dry preliminarily disintegrated cellulose nano-gel film (synthesized by Gluconacetobacter xylinus) and the composites based on this bacterial cellulose. The composites included ZrO2 nanoparticles, Tb3+ in the form of low molecular weight salt and of metal-polymer complex with poly(vinylpyrrolydone)-poly(methacryloyl-o-aminobenzoic acid) copolymer. The combined analysis of the data obtained allowed revealing three levels of fractal organization in mesostructure of G. xylinus cellulose and its composites. It was shown that both the composition and an aggregation state of dopants have a significant impact on the structural characteristics of the organic-inorganic composites. The composites containing Tb3+ ions demonstrate efficient luminescence; its intensity is an order of magnitude higher in the case of the composites with the metal-polymer complex. It was found that there is the optimal content of ZrO2 nanoparticles in composites resulting in increased Tb3+ luminescence.

Indexes and efficiencies of N optimum dose reviewed as water- and Nitrogen- footprint

NASA Astrophysics Data System (ADS)

Castellanos, Maria Teresa; Cartagena, Maria Carmen; Cabello, Maria Jesus; Rivas, Francisco; Tarquis, Ana Maria; Arce, Augusto

2013-04-01

In order to establish rational nitrogen (N) fertilization and reduce groundwater contamination, a clearer understanding of the N distribution through the growing season and its balance is crucial. In three successive years, a melon crop (Cucumis melo L. cv. Sancho) was grown under field conditions to determine the uptake of N fertilizer, applied by means of fertigation at different stages of plant growth. In addition, Strategies are being sought to increase water use in cropping systems and to reduce drainage. The estimation of N mineralized from soil organic matter is an essential tool to determine the amount necessary to optimize crop yield and minimize the environmental impact of excess N. In this study we propose a methodology that allows us to study fertigated management integrating several aspects: economic and environmental. Even the complexity of the system, we have reduced the number of indexes and efficiencies need to establish the framework of N management and its economical and environmental consequences. At the same time, we have translated all them into a water- and Nitrogen- footprint in each year. ACKNOWLEDGEMENTS This work has been partially supported by INIA under Project INIA-RTA 2010-00110-C03-02

[Effects of cotton straw returning on soil organic carbon, nitrogen, phosphorus and potas-sium contents in soil aggregates].

PubMed

Wang, Shuang Lei; Liu, Yan Hui; Song, Xian Liang; Wei, Shao Bin; Li, Jin Pu; Nie, Jun Jun; Qin, Du Lin; Sun, Xue Zhen

2016-12-01

To clarify the effects of cotton straw returning on the composition and contents of nu-trients in different particle sizes of aggregates, two treatments with or without cotton straw returning were tested in continuous three years. After three years straw treatments, we collected undisturbed soil within 0-5, 5-10, 10-20 and 20-30 cm soil layers, and to measure the composition, soil organic carbon, nitrogen, phosphorus and potassium contents in different particle sizes of aggregates classified using dry sieving. Returning cotton straw into the field significantly increased particle contents of 2-5 mm and >5 mm aggregates in 0-5 cm soil layer, while the content of <0.25 mm micro-aggregates was decreased. Cotton straw returning significantly improved soil organic carbon, nitrogen, and potassium contents by 19.2%, 14.2% and 17.3%, respectively, compared to no returning control. In 5-10 cm soil layer, cotton straw returning increased the contents of 2-5 mm and >5 mm aggregates, reduced the content of <0.25 mm micro-aggregate, but significantly increased contents of soil organic carbon, available nitrogen and potassium by 19.6%, 12.6% and 23.4%, compared to no straw returning control. In 10-20 cm soil layer, cotton straw returning significantly reduced the content of <0.25 mm micro-aggregates, and significantly enhanced soil organic carbon, nitrogen, and potassium contents by 8.4%, 10.9% and 11.5%, compared to the control. However, in 20-30 cm soil layer, cotton straw returning only increased soil available potassium content by 12.0%, while there were no significant changes in particle size, organic carbon, nitrogen and phosphorus contents. We concluded that cotton straw returning could significantly improve the structure of surface soil by increasing the number of macro-aggregates, contents of organic carbon, available nitrogen and potassium in aggregates, while decreasing micro-aggregate content. The enhancement of the contribution of macro-aggregates to soil fertility by returning cotton straw could improve soil physical structure, fertility and then increase cotton yield.

Fauna-associated changes in chemical and biochemical properties of soil.

PubMed

Tripathi, G; Sharma, B M

2006-12-01

To study the impacts of abundance of woodlice, termites, and mites on some functional aspects of soil in order to elucidate the specific role of soil fauna in improving soil fertility in desert. Fauna-rich sites were selected as experimental sites and adjacent areas were taken as control. Soil samples were collected from both sites. Soil respiration was measured at both sites. The soil samples were sent to laboratory, their chemical and biochemical properties were analyzed. Woodlice showed 25% decrease in organic carbon and organic matter as compared to control site. Whereas termites and mites showed 58% and 16% decrease in organic carbon and organic matter. In contrast, available nitrogen (nitrate and ammonical both) and phosphorus exhibited 2-fold and 1.2-fold increase, respectively. Soil respiration and dehydrogenase activity at the sites rich in woodlice, termites and mites produced 2.5-, 3.5- and 2-fold increases, respectively as compared to their control values. Fauna-associated increase in these biological parameters clearly reflected fauna-induced microbial activity in soil. Maximum decrease in organic carbon and increase in nitrate-nitrogen and ammonical-nitrogen, available phosphorus, soil respiration and dehydrogenase activity were produced by termites and minimum by mites reflecting termite as an efficient soil improver in desert environment. The soil fauna-associated changes in chemical (organic carbon, nitrate-nitrogen, ammonical-nitrogen, phosphorus) and biochemical (soil respiration, dehydrogenase activity) properties of soil improve soil health and help in conservation of desert pedoecosystem.

Understanding Plant Nitrogen Metabolism through Metabolomics and Computational Approaches

PubMed Central

Beatty, Perrin H.; Klein, Matthias S.; Fischer, Jeffrey J.; Lewis, Ian A.; Muench, Douglas G.; Good, Allen G.

2016-01-01

A comprehensive understanding of plant metabolism could provide a direct mechanism for improving nitrogen use efficiency (NUE) in crops. One of the major barriers to achieving this outcome is our poor understanding of the complex metabolic networks, physiological factors, and signaling mechanisms that affect NUE in agricultural settings. However, an exciting collection of computational and experimental approaches has begun to elucidate whole-plant nitrogen usage and provides an avenue for connecting nitrogen-related phenotypes to genes. Herein, we describe how metabolomics, computational models of metabolism, and flux balance analysis have been harnessed to advance our understanding of plant nitrogen metabolism. We introduce a model describing the complex flow of nitrogen through crops in a real-world agricultural setting and describe how experimental metabolomics data, such as isotope labeling rates and analyses of nutrient uptake, can be used to refine these models. In summary, the metabolomics/computational approach offers an exciting mechanism for understanding NUE that may ultimately lead to more effective crop management and engineered plants with higher yields. PMID:27735856

Arctic shelves as platforms for biogeochemical activity: Nitrogen and carbon transformations in the Chukchi Sea, Alaska

NASA Astrophysics Data System (ADS)

Hardison, Amber K.; McTigue, Nathan D.; Gardner, Wayne S.; Dunton, Kenneth H.

2017-10-01

Continental shelves comprise <5% of global ocean area but may account for a disproportionate 30% of primary production, 80% of organic matter burial, and >50% of marine denitrification. The Hanna Shoal region, part of the continental shelf system in the northeast Chukchi Sea, Alaska, is recognized for its high biodiversity and productivity. We investigated the role of sediments in organic matter decomposition and nutrient cycling at five stations on the shallow Hanna Shoal. In particular, we asked (1) how much sediment organic matter is remineralized in the Chukchi Sea, and what factors drive this degradation, (2) do sediments function as a net source for fixed nitrogen (thus fueling primary production in the overlying water), or as a net sink for fixed nitrogen (thereby removing it from the system), and (3) what is the balance between sediment NH4+ uptake and regeneration, and what factors drive NH4+ cycling? We conducted dark sediment core incubations to measure sediment O2 consumption, net N2 and nutrient (NH4+, NO3-, NO2-, PO43-) fluxes, and rates of sediment NH4+ cycling, including uptake and regeneration. Rates of sediment O2 consumption and NH4+ and PO43- efflux suggest that high organic matter remineralization rates occurred in these cold (-2 °C) sediments. We estimated that total organic carbon remineralization accounted for 20-57% of summer export production measured on the Chukchi Shelf. Net N2 release was the dominant nitrogen flux, indicating that sediments acted as a net sink for bioavailable nitrogen via denitrification. Organic carbon remineralization via denitrification accounted for 6-12% of summer export production, which made up 25% of the total organic carbon oxidized in Hanna Shoal sediments. These shallow, productive Arctic shelves are ;hotspots; for organic matter remineralization.

Assessment of free-living nitrogen fixing microorganisms for commercial nitrogen fixation. [economic analysis of ammonia production

NASA Technical Reports Server (NTRS)

Stokes, B. O.; Wallace, C. J.

1978-01-01

Ammonia production by Klebsiella pneumoniae is not economical with present strains and improving nitrogen fixation to its theoretical limits in this organism is not sufficient to achieve economic viability. Because the value of both the hydrogen produced by this organism and the methane value of the carbon source required greatly exceed the value of the ammonia formed, ammonia (fixed nitrogen) should be considered the by-product. The production of hydrogen by KLEBSIELLA or other anaerobic nitrogen fixers should receive additional study, because the activity of nitrogenase offers a significant improvement in hydrogen production. The production of fixed nitrogen in the form of cell mass by Azotobacter is also uneconomical and the methane value of the carbon substrate exceeds the value of the nitrogen fixed. Parametric studies indicate that as efficiencies approach the theoretical limits the economics may become competitive. The use of nif-derepressed microorganisms, particularly blue-green algae, may have significant potential for in situ fertilization in the environment.

Effects of nitrogen fertilizers on the growth and nitrate content of lettuce (Lactuca sativa L.).

PubMed

Liu, Cheng-Wei; Sung, Yu; Chen, Bo-Ching; Lai, Hung-Yu

2014-04-22

Nitrogen is an essential element for plant growth and development; however, due to environmental pollution, high nitrate concentrations accumulate in the edible parts of these leafy vegetables, particularly if excessive nitrogen fertilizer has been applied. Consuming these crops can harm human health; thus, developing a suitable strategy for the agricultural application of nitrogen fertilizer is important. Organic, inorganic, and liquid fertilizers were utilized in this study to investigate their effect on nitrate concentrations and lettuce growth. The results of this pot experiment show that the total nitrogen concentration in soil and the nitrate concentration in lettuce increased as the amount of nitrogen fertilizer increased. If the recommended amount of inorganic fertilizer (200 kg·N·ha⁻¹) is used as a standard of comparison, lettuce augmented with organic fertilizers (200 kg·N·ha⁻¹) have significantly longer and wider leaves, higher shoot, and lower concentrations of nitrate.

Effects of Nitrogen Fertilizers on the Growth and Nitrate Content of Lettuce (Lactuca sativa L.)

PubMed Central

Liu, Cheng-Wei; Sung, Yu; Chen, Bo-Ching; Lai, Hung-Yu

2014-01-01

Nitrogen is an essential element for plant growth and development; however, due to environmental pollution, high nitrate concentrations accumulate in the edible parts of these leafy vegetables, particularly if excessive nitrogen fertilizer has been applied. Consuming these crops can harm human health; thus, developing a suitable strategy for the agricultural application of nitrogen fertilizer is important. Organic, inorganic, and liquid fertilizers were utilized in this study to investigate their effect on nitrate concentrations and lettuce growth. The results of this pot experiment show that the total nitrogen concentration in soil and the nitrate concentration in lettuce increased as the amount of nitrogen fertilizer increased. If the recommended amount of inorganic fertilizer (200 kg·N·ha−1) is used as a standard of comparison, lettuce augmented with organic fertilizers (200 kg·N·ha−1) have significantly longer and wider leaves, higher shoot, and lower concentrations of nitrate. PMID:24758896

Controls on the distributions of organic carbon and nitrogen in the eastern Pacific Ocean

NASA Astrophysics Data System (ADS)

Hansell, Dennis A.; Waterhouse, Tye Y.

1997-05-01

Measurements of total organic carbon (TOC) and nitrogen (TON) were made on the WOCE P18 line (from 67°S to 23°N along 103°/110°W). There was an accumulation of TOC on the equator and in the oligotrophic waters north and south of the equator. The concentrations of TOC were well correlated with temperature, indicating an important physical control on its distribution. The boundary separating shallow, TOC-rich water from deep, TOC-poor water overlaid the main thermocline. This observation suggests that water column stability or residence time imparted by the main thermocline is a primary determinant of TOC accumulation. Elevated TON concentrations were found in all surface waters, with the lowest values found in the region of 20-35°S. Net TON drawdown in the South Pacific subtropical gyre, likely due to biological utilization and vertical export of the nitrogen, was initiated with depletion of equatorially upwelled nitrate. The degree to which inorganic nitrogen was limiting in the surface layer south of the equator served to control the concentrations of TON. Such controls were not exerted on organic carbon, as reflected by increasing C:N ratios of organic matter as TON was removed. Unlike the findings in the South Pacific, TON concentrations in oligotrophic waters north of the equator were frequently higher than on the equator. Such accumulations are hypothesized to be maintained from nitrogen fixation, nitrogen input due to vertical migration of autotrophs or diffusive flux of inorganic nitrogen into the euphotic zone across the relatively shallow nitracline.

THE FATE AND RETENTION OF ORGANIC AND INORGANIC 15N-NITROGEN IN AN OLD-GROWTH FOREST SOIL IN WESTERN OREGON

EPA Science Inventory

Forests in the Pacific northwestern region of North America receive very little nitrogen through atmospheric deposition and thus can provide insights into how the nitrogen cycle functioned before heavy atmospheric deposition of inorganic nitrogen began in other regions. Our obje...

Compost and manure effects on sugarbeet nitrogen uptake, nitrogen recovery, and nitrogen use efficiency

USDA-ARS?s Scientific Manuscript database

To maximize recoverable sucrose from sugarbeet (Beta vulgaris L.), producers must effectively manage added nitrogen (N), whether it be from urea or organic sources such as manure or composted manure. Our multi-site study’s objective was to determine the effects of a one-time application of stockpil...

Effect of management on nitrogen budgets and implications for air, soil, and water quality

USDA-ARS?s Scientific Manuscript database

Nitrogen is a key nutrient for both national and global food security, and nitrogen inputs from organic and/or inorganic sources are essential to maintain sustainable and economically viable agricultural systems. The challenge with nitrogen is that it is very dynamic and mobile, and some forms are s...

Importance of Dissolved Organic Nitrogen to Water Quality in Narragansett Bay

EPA Science Inventory

This preliminary analysis of the importance of the dissolved organic nitrogen (DON) pool in Narragansett Bay is being conducted as part of a five-year study of Narragansett Bay and its watershed. This larger study includes water quality and ecological modeling components that foc...

Impact of solids retention time on dissolved organic nitrogen and its biodegradability in treated wastewater

USDA-ARS?s Scientific Manuscript database

Dissolved organic nitrogen (DON) and its biodegradability in treated wastewater have recently gained attention because DON potentially causes oxygen depletion and/or eutrophication in receiving waters. Laboratory scale chemostat experiments were conducted at 9 different solids retention times (SRTs)...

Tracers and constituents indicating the nature of organic fluxes, their origin and the effect of environmental conditions

NASA Astrophysics Data System (ADS)

Gadel, F.; Puigbó, A.; Alcan˜iz, J. M.; Charrière, B.; Serve, L.

1990-09-01

The nature of particulate organic matter was studied in suspended material sampled by bottles, particles collected by sediment traps and deposits from deltaic and open sea ecosystems of the northwestern Mediterranean. Elemental analyses were combined with pyrolysis-gas chromatography-mass spectrometry and with analysis of individual compounds such as phenols separated by high-performance liquid chromatography. In the Rhoˆne delta, a multilayered system was observed. The surficial turbid layer was enriched with fresh material of river origin. Organic matter was more altered and richer in phenols in the bottom nepheloid layer. The river regime determined the nature and quantity of suspended material: when in spate, degraded organic matter previously deposited in the river bed was transported to the sea, thereby inducing an increase of pyrolysis derived aromatic hydrocarbons. On the other hand, phenolic aldehydes increased in the bottom nepheloid layer. When water level was low, organic matter seemed to be of more local origin. The content of phenols and nitrogen-containing compounds increased. The influence of the Rhoˆne River decreased off the mouth, when terrestrial markers were diluted by products deriving from phytoplanktonic activity. Compared with suspended material, trapped organic matter was coarser, more degraded and contained more aromatic hydrocarbons. It was different in nature and size, indicating that it was trapped over a longer period. Deposits contained altered organic matter resulting from degrading processes in the water column. Sediments showed a double trend off the mouth of the river; an increase in nitrogen-containing compounds, indicating a more marine character, and a decrease in phenols and carbohydrates deriving from the terrestrial ligno-cellulosic complex. In the southwestern part of the Gulf of Lions, in the Teˆt prodelta, organic matter from sediment traps was fresher than in the Rhoˆne delta. Phenols and some carbohydrates rapidly decreased from the prodelta due to a lower runoff. During the spate, suspended material was rapidly deposited and sediments were enriched in terrestrial phenols. In the open sea environment, in the Lacaze-Duthiers Canyon at 645 m, in summer, the euphotic zone was rich in amino-sugars and contained a large diversity of phenols deriving from fish fecal pellets. In winter/spring, the development of phytoplanktonic blooms in surficial layers led to high contents of nitrogenous compounds. In deeper layers, the nature of organic matter was different from surficial layers in summer and more homogeneous in winter, although a flux of degraded material rich in pyrolysis-derived aromatic hydrocarbons and poor in nitrogenous compounds progressively sank towards the bottom. The two marine prodeltas were compared: organic matter was more degraded in suspended material and sediments collected in the submarine delta of the Rhoˆne River. Organic material originating from the river was transported further offshore, as indicated by a higher content of aromatic hydrocarbons and phenols. In the southwestern part of the Gulf of Lions, the prodelta reflected the influence of local rivers, with lower discharges.

Simulated Nitrogen Deposition has Minor Effects on Ecosystem Pools and Fluxes of Energy, Elements, and Biochemicals in a Northern Hardwoods Forest

NASA Astrophysics Data System (ADS)

Talhelm, A. F.; Pregitzer, K. S.; Burton, A. J.; Xia, M.; Zak, D. R.

2017-12-01

The elemental and biochemical composition of plant tissues is an important influence on primary productivity, decomposition, and other aspects of biogeochemistry. Human activity has greatly altered biogeochemical cycles in ecosystems downwind of industrialized regions through atmospheric nitrogen deposition, but most research on these effects focuses on individual elements or steps in biogeochemical cycles. Here, we quantified pools and fluxes of biomass, the four major organic elements (carbon, oxygen, hydrogen, nitrogen), four biochemical fractions (lignin, structural carbohydrates, cell walls, and soluble material), and energy in a mature northern hardwoods forest in Michigan. We sampled the organic and mineral soil, fine and coarse roots, leaf litter, green leaves, and wood for chemical analyses. We then combined these data with previously published and archival information on pools and fluxes within this forest, which included replicated plots receiving either ambient deposition or simulated nitrogen deposition (3 g N m-2 yr-1 for 18 years). Live wood was the largest pool of energy and all elements and biochemical fractions. However, the production of wood, leaf litter, and fine roots represented similar fluxes of carbon, hydrogen, oxygen, cell wall material, and energy, while nitrogen fluxes were dominated by leaf litter and fine roots. Notably, the flux of lignin via fine roots was 70% higher than any other flux. Experimental nitrogen deposition had relatively few significant effects, increasing foliar nitrogen, increasing the concentration of lignin in the soil organic horizon and decreasing pools of all elements and biochemical fractions in the soil organic horizon except nitrogen, lignin, and structural carbohydrates. Overall, we found that differences in tissue chemistry concentrations were important determinants of ecosystem-level pools and fluxes, but that nitrogen deposition had little effect on concentrations, pools, or fluxes in this mature forest. Disclaimer: The views expressed in this poster are those of the authors and do not necessarily represent the views or policies of the U.S. EPA.

Decadal-scale changes in forest soil carbon and nitrogen storage are influenced by organic matter removal during timber harvest

Treesearch

Ryan M. Mushinski; Thomas W. Boutton; D. Andrew Scott

2017-01-01

This study investigates whether different intensities of organic matter removal associated with timber harvest influence decadal-scale storage of soil organic carbon (SOC) and total nitrogen (TN) in the top 1 m of mineral soil 18 years postharvest in a Pinus taeda L. forest in the Gulf Coastal Plain. We quantified forest harvest-related changes in...

Understanding Nitrogen Fixation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paul J. Chirik

The purpose of our program is to explore fundamental chemistry relevant to the discovery of energy efficient methods for the conversion of atmospheric nitrogen (N{sub 2}) into more value-added nitrogen-containing organic molecules. Such transformations are key for domestic energy security and the reduction of fossil fuel dependencies. With DOE support, we have synthesized families of zirconium and hafnium dinitrogen complexes with elongated and activated N-N bonds that exhibit rich N{sub 2} functionalization chemistry. Having elucidated new methods for N-H bond formation from dihydrogen, C-H bonds and Broensted acids, we have since turned our attention to N-C bond construction. These reactionsmore » are particularly important for the synthesis of amines, heterocycles and hydrazines with a range of applications in the fine and commodity chemicals industries and as fuels. One recent highlight was the discovery of a new N{sub 2} cleavage reaction upon addition of carbon monoxide which resulted in the synthesis of an important fertilizer, oxamide, from the diatomics with the two strongest bonds in chemistry. Nitrogen-carbon bonds form the backbone of many important organic molecules, especially those used in the fertilizer and pharamaceutical industries. During the past year, we have continued our work in the synthesis of hydrazines of various substitution patterns, many of which are important precursors for heterocycles. In most instances, the direct functionalization of N{sub 2} offers a more efficient synthetic route than traditional organic methods. In addition, we have also discovered a unique CO-induced N{sub 2} bond cleavage reaction that simultaneously cleaves the N-N bond of the metal dinitrogen compound and assembles new C-C bond and two new N-C bonds. Treatment of the CO-functionalized core with weak Broensted acids liberated oxamide, H{sub 2}NC(O)C(O)NH{sub 2}, an important slow release fertilizer that is of interest to replace urea in many applications. The synthesis of ammonia, NH{sub 3}, from its elements, H{sub 2} and N{sub 2}, via the venerable Haber-Bosch process is one of the most significant technological achievements of the past century. Our research program seeks to discover new transition metal reagents and catalysts to disrupt the strong N {triple_bond} N bond in N{sub 2} and create new, fundamental chemical linkages for the construction of molecules with application as fuels, fertilizers and fine chemicals. With DOE support, our group has discovered a mild method for ammonia synthesis in solution as well as new methods for the construction of nitrogen-carbon bonds directly from N{sub 2}. Ideally these achievements will evolve into more efficient nitrogen fixation schemes that circumvent the high energy demands of industrial ammonia synthesis. Industrially, atmospheric nitrogen enters the synthetic cycle by the well-established Haber-Bosch process whereby N{sub 2} is hydrogenated to ammonia at high temperature and pressure. The commercialization of this reaction represents one of the greatest technological achievements of the 20th century as Haber-Bosch ammonia is responsible for supporting approximately 50% of the world's population and serves as the source of half of the nitrogen in the human body. The extreme reaction conditions required for an economical process have significant energy consequences, consuming 1% of the world's energy supply mostly in the form of pollution-intensive coal. Moreover, industrial H{sub 2} synthesis via the water gas shift reaction and the steam reforming of methane is fossil fuel intensive and produces CO{sub 2} as a byproduct. New synthetic methods that promote this thermodynamically favored transformation ({Delta}G{sup o} = -4.1 kcal/mol) under milder conditions or completely obviate it are therefore desirable. Most nitrogen-containing organic molecules are derived from ammonia (and hence rely on the Haber-Bosch and H{sub 2} synthesis processes) and direct synthesis from atmospheric nitrogen could, in principle, be more energy-efficient. This is particularly attractive given the interest in direct hydrazine fuel cells.« less

Formation of Hydride-Meisenheimer Complexes of Picric Acid (2,4,6-Trinitrophenol) and 2,4-Dinitrophenol during Mineralization of Picric Acid by Nocardioides sp. Strain CB 22-2

PubMed Central

Behrend, Christian; Heesche-Wagner, Kerstin

1999-01-01

There are only a few examples of microbial conversion of picric acid (2,4,6-trinitrophenol). None of the organisms that have been described previously is able to use this compound as a sole source of carbon, nitrogen, and energy at high rates. In this study we isolated and characterized a strain, strain CB 22-2, that was able to use picric acid as a sole source of carbon and energy at concentrations up to 40 mM and at rates of 1.6 mmol · h−1 · g (dry weight) of cells−1 in continuous cultures and 920 μmol · h−1 · g (dry weight) of cells−1 in flasks. In addition, this strain was able to use picric acid as a sole source of nitrogen at comparable rates in a nitrogen-free medium. Biochemical characterization and 16S ribosomal DNA analysis revealed that strain CB 22-2 is a Nocardioides sp. strain. High-pressure liquid chromatography and UV-visible light data, the low residual chemical oxygen demand, and the stoichiometric release of 2.9 ± 0.1 mol of nitrite per mol of picric acid provided strong evidence that complete mineralization of picric acid occurred. During transformation, the metabolites detected in the culture supernatant were the [H−]-Meisenheimer complexes of picric acid and 2,4-dinitrophenol (H−-DNP), as well as 2,4-dinitrophenol. Experiments performed with crude extracts revealed that H−-DNP formation indeed is a physiologically relevant step in picric acid metabolism. PMID:10103224

Preparation, characterization, non-isothermal reaction kinetics, thermodynamic properties, and safety performances of high nitrogen compound: hydrazine 3-nitro-1,2,4-triazol-5-one complex.

PubMed

Yi, Jian-Hua; Zhao, Feng-Qi; Gao, Hong-Xu; Xu, Si-Yu; Wang, Min-Chang; Hu, Rong-Zu

2008-05-01

A new high nitrogen compound hydrazine 3-nitro-1,2,4-triazol-5-one complex (HNTO) was prepared by the reaction of 3-nitro-1,2,4-triazol-5-one with hydrazine hydrate, and its structure was characterized by means of organic elemental analyzer, FT-IR, XRD, (13)C NMR and (15)N NMR. The non-isothermal reaction kinetics of the main exothermic decomposition reaction of HNTO was investigated by means of DSC. The thermodynamic properties of HNTO were calculated. The results showed that the formation of HNTO is achieved by proton transfer of N(4) atom, and it makes a higher nitrogen content and lower acidity. The reaction mechanism of HNTO is classified as nucleation and growth, and the mechanism function is Avramo-Erofeev equation with n=2/5. The kinetic parameters of the reaction are E(a)=195.29 kJ mol(-1), lg(A (s(-1)))=19.37, respectively. The kinetic equation can be expressed as: d(alpha)/d(t) = 10(18.97)(1 - alpha)[-ln(1 - alpha)](3/5) e(-2.35 x 10(4)/T). The safety performances of HNTO were carried out. The critical temperature of thermal explosion are 464.26 and 474.37 K, the adiabatic time-to-explosion is 262s, the impact sensitivity H(50)=45.7 cm, the friction sensitivity P=20% and the electrostatic spark sensitivity E(50)>5.4J (no ignition). It shows that HNTO has an insensitive nature as RDX and NTO, etc.

Synthesis of the sulfur amino acids: cysteine and methionine.

PubMed

Wirtz, Markus; Droux, Michel

2005-12-01

This review will assess new features reported for the molecular and biochemical aspects of cysteine and methionine biosynthesis in Arabidopsis thaliana with regards to early published data from other taxa including crop plants and bacteria (Escherichia coli as a model). By contrast to bacteria and fungi, plant cells present a complex organization, in which the sulfur network takes place in multiple sites. Particularly, the impact of sulfur amino-acid biosynthesis compartmentalization will be addressed in respect to localization of sulfur reduction. To this end, the review will focus on regulation of sulfate reduction by synthesis of cysteine through the cysteine synthase complex and the synthesis of methionine and its derivatives. Finally, regulatory aspects of sulfur amino-acid biosynthesis will be explored with regards to interlacing processes such as photosynthesis, carbon and nitrogen assimilation.

Inactivation of urease by catechol: Kinetics and structure.

PubMed

Mazzei, Luca; Cianci, Michele; Musiani, Francesco; Lente, Gábor; Palombo, Marta; Ciurli, Stefano

2017-01-01

Urease is a Ni(II)-containing enzyme that catalyzes the hydrolysis of urea to yield ammonia and carbamate at a rate 10 15 times higher than the uncatalyzed reaction. Urease is a virulence factor of several human pathogens, in addition to decreasing the efficiency of soil organic nitrogen fertilization. Therefore, efficient urease inhibitors are actively sought. In this study, we describe a molecular characterization of the interaction between urease from Sporosarcina pasteurii (SPU) and Canavalia ensiformis (jack bean, JBU) with catechol, a model polyphenol. In particular, catechol irreversibly inactivates both SPU and JBU with a complex radical-based autocatalytic multistep mechanism. The crystal structure of the SPU-catechol complex, determined at 1.50Å resolution, reveals the structural details of the enzyme inhibition. Copyright © 2016 Elsevier Inc. All rights reserved.

Nitrogen dynamics in an Alaskan salt marsh following spring use by geese

USGS Publications Warehouse

Zacheis, Amy B.; Ruess, Roger W.; Hupp, Jerry W.

2002-01-01

Lesser snow geese (Anser caerulescens caerulescens) and Canada geese (Branta canadensis) use several salt marshes in Cook Inlet, Alaska, as stopover areas for brief periods during spring migration. We investigated the effects of geese on nitrogen cycling processes in Susitna Flats, one of the marshes. We compared net nitrogen mineralization, organic nitrogen pools and production in buried bags, nitrogen fixation by cyanobacteria, and soil and litter characteristics on grazed plots versus paired plots that had been exclosed from grazing for 3 years. Grazed areas had higher rates of net nitrogen mineralization in the spring and there was no effect of grazing on organic nitrogen availability. The increased mineralization rates in grazed plots could not be accounted for by alteration of litter quality, litter quantity, microclimate, or root biomass, which were not different between grazed and exclosed plots. In addition, fecal input was very slight in the year that we studied nitrogen cycling. We propose that trampling had two effects that could account for greater nitrogen availability in grazed areas: litter incorporation into soil, resulting in increased rates of decomposition and mineralization of litter material, and greater rates of nitrogen fixation by cyanobacteria on bare, trampled soils. A path analysis indicated that litter incorporation by trampling played a primary role in the nitrogen dynamics of the system, with nitrogen fixation secondary, and that fecal input was of little importance.

The nitrogen cycle on Mars

NASA Technical Reports Server (NTRS)

Mancinelli, Rocco L.

1989-01-01

Nirtogen is an essential element for the evolution of life, because it is found in a variety of biologically important molecules. Therefore, N is an important element to study from a exobiological perspective. In particular, fixed nitrogen is the biologically useful form of nitrogen. Fixed nitrogen is generally defines as NH3, NH4(+), NO(x), or N that is chemically bound to either inorganic or organic molecules, and releasable by hydrolysis to NH3 or NH4(+). On Earth, the vast majority of nitrogen exists as N2 in the atmosphere, and not in the fixes form. On early Mars the same situations probably existed. The partial pressure of N2 on early Mars was thought to be 18 mb, significantly less than that of Earth. Dinitrogen can be fixed abiotically by several mechanisms. These mechanisms include thernal shock from meteoritic infall and lightning, as well as the interaction of light and sand containing TiO2 which produces NH3 that would be rapidly destroyed by photolysis and reaction with OH radicals. These mechanisms could have been operative on primitive Mars.The chemical processes effecting these compounds and possible ways of fixing or burying N in the Martian environment are described. Data gathered in this laboratory suggest that the low abundance of nitrogen along (compared to primitive Earth) may not significantly deter the origin and early evolution of a nitrogen utilizing organisms. However, the conditions on current Mars with respect to nitrogen are quite different, and organisms may not be able to utilize all of the available nitrogen.

73. LIQUID NITROGEN PUMPING STATION ON WEST SIDE OF MST; ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

73. LIQUID NITROGEN PUMPING STATION ON WEST SIDE OF MST; NITROGEN EXCHANGERS ON RIGHT. SOUTHWEST CORNER OF MST VISIBLE; ENVIRONMENTAL CURTAIN SWING AND PLATFORM EXTENDED. - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 East, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

Initial nitrogen enrichment conditions determines variations in nitrogen substrate utilization by heterotrophic bacterial isolates.

PubMed

Ghosh, Suchismita; Ayayee, Paul A; Valverde-Barrantes, Oscar J; Blackwood, Christopher B; Royer, Todd V; Leff, Laura G

2017-04-04

The nitrogen (N) cycle consists of complex microbe-mediated transformations driven by a variety of factors, including diversity and concentrations of N compounds. In this study, we examined taxonomic diversity and N substrate utilization by heterotrophic bacteria isolated from streams under complex and simple N-enrichment conditions. Diversity estimates differed among isolates from the enrichments, but no significant composition were detected. Substrate utilization and substrate range of bacterial assemblages differed within and among enrichments types, and not simply between simple and complex N-enrichments. N substrate use patterns differed between isolates from some complex and simple N-enrichments while others were unexpectedly similar. Taxonomic composition of isolates did not differ among enrichments and was unrelated to N use suggesting strong functional redundancy. Ultimately, our results imply that the available N pool influences physiology and selects for bacteria with various abilities that are unrelated to their taxonomic affiliation.

Carbon dioxide capture using covalent organic frameworks (COFs) type material-a theoretical investigation.

PubMed

Dash, Bibek

2018-04-26

The present work deals with a density functional theory (DFT) study of porous organic framework materials containing - groups for CO 2 capture. In this study, first principle calculations were performed for CO 2 adsorption using N-containing covalent organic framework (COFs) models. Ab initio and DFT-based methods were used to characterize the N-containing porous model system based on their interaction energies upon complexing with CO 2 and nitrogen gas. Binding energies (BEs) of CO 2 and N 2 molecules with the polymer framework were calculated with DFT methods. Hybrid B3LYP and second order MP2 methods combined with of Pople 6-31G(d,p) and correlation consistent basis sets cc-pVDZ, cc-pVTZ and aug-ccVDZ were used to calculate BEs. The effect of linker groups in the designed covalent organic framework model system on the CO 2 and N 2 interactions was studied using quantum calculations.

Temporal change in molecular weight distribution of hot-water extractable organic nitrogen from cattle manure compost buried in soil using high-performance size exclusion chromatography with chemiluminescent nitrogen detection

NASA Astrophysics Data System (ADS)

Moriizumi, M.; Mutsunaga, T.

2012-04-01

The application of compost can improve the fertility of the agricultural soils. The compost organic nitrogen is absorbed by plants after degradation and mineralization. To investigate the degradation process of compost organic nitrogen in soil, we conducted soil burial test of compost and observed the molecular weight distribution of hot-water extractable organic nitrogen from the compost. The cattle manure compost (1g) was mixed with soil (25g), put into glass fiber-filter paper bag and buried in 15 cm under surface of the ground for 6 months. The soils used were Andosol, Gray Lowland soil, and Yellow soil without organic matter application for 25 years in Tsukuba, Japan. Organic matter was extracted from the buried sample with 80° C of water for 16 hours. The molecular weight distribution of the hot-water extractable organic matter (HWEOM) was measured by high-performance size exclusion chromatography and chemiluminescent nitrogen detection (HPSEC/CLND). In this system, N-containing compound eluted from a SEC column was introduced into a furnace at 1050° C, and N in the compound was oxidized to nitric oxide and then detected using a chemiluminescent reaction with ozone. The N chromatogram showed that N in the HWEOM from the soil with compost had various molecular weights ranging from 0.1 to 100 kDa. A void peak (>100 kDa), a broad peak around 30 kDa, and several sharp peaks less than 30 kDa were observed in the chromatogram. The broad peak (~ 30kDa) was likely to be derived from the compost, because it was not observed in the chromatogram of HWEOM from soil alone. The N intensities of all peaks decreased with burial time, especially, the broad peak (~30 kDa) intensity rapidly decreased by 10 - 50 % in only first 2 months. The decreasing rates of the broad peak were higher than that of the sharp peaks, indicating that the organic nitrogen with a larger molecular weight decomposed faster. The broad peak (~ 30 kDa) had visible (420nm) absorption and less fulvic acid like florescence (Ex340nm, Em440 nm). The several sharp peaks had small visible absorption and intense florescence. Further studies are needed to assign the chemical forms for each peak.

Improvement of pea biomass and seed productivity by simultaneous increase of phloem and embryo loading with amino acids.

PubMed

Zhang, Lizhi; Garneau, Matthew G; Majumdar, Rajtilak; Grant, Jan; Tegeder, Mechthild

2015-01-01

The development of sink organs such as fruits and seeds strongly depends on the amount of nitrogen that is moved within the phloem from photosynthetic-active source leaves to the reproductive sinks. In many plant species nitrogen is transported as amino acids. In pea (Pisum sativum L.), source to sink partitioning of amino acids requires at least two active transport events mediated by plasma membrane-localized proteins, and these are: (i) amino acid phloem loading; and (ii) import of amino acids into the seed cotyledons via epidermal transfer cells. As each of these transport steps might potentially be limiting to efficient nitrogen delivery to the pea embryo, we manipulated both simultaneously. Additional copies of the pea amino acid permease PsAAP1 were introduced into the pea genome and expression of the transporter was targeted to the sieve element-companion cell complexes of the leaf phloem and to the epidermis of the seed cotyledons. The transgenic pea plants showed increased phloem loading and embryo loading of amino acids resulting in improved long distance transport of nitrogen, sink development and seed protein accumulation. Analyses of root and leaf tissues further revealed that genetic manipulation positively affected root nitrogen uptake, as well as primary source and sink metabolism. Overall, the results suggest that amino acid phloem loading exerts regulatory control over pea biomass production and seed yield, and that import of amino acids into the cotyledons limits seed protein levels. © 2014 The Authors The Plant Journal © 2014 John Wiley & Sons Ltd.

Hyperprolinemic larvae of the drosophilid fly, Chymomyza costata, survive cryopreservation in liquid nitrogen

PubMed Central

Koštál, Vladimír; Zahradníčková, Helena; Šimek, Petr

2011-01-01

The larva of the drosophilid fly, Chymomyza costata, is probably the most complex metazoan organism that can survive submergence in liquid nitrogen (-196 °C) in a fully hydrated state. We examined the associations between the physiological and biochemical parameters of differently acclimated larvae and their freeze tolerance. Entering diapause is an essential and sufficient prerequisite for attaining high levels of survival in liquid nitrogen (23% survival to adult stage), although cold acclimation further improves this capacity (62% survival). Profiling of 61 different metabolites identified proline as a prominent compound whose concentration increased from 20 to 147 mM during diapause transition and subsequent cold acclimation. This study provides direct evidence for the essential role of proline in high freeze tolerance. We increased the levels of proline in the larval tissues by feeding larvae proline-augmented diets and found that this simple treatment dramatically improved their freeze tolerance. Cell and tissue survival following exposure to liquid nitrogen was evident in proline-fed nondiapause larvae, and survival to adult stage increased from 0% to 36% in proline-fed diapause-destined larvae. A significant statistical correlation was found between the whole-body concentration of proline, either natural or artificial, and survival to the adult stage in liquid nitrogen for diapause larvae. Differential scanning calorimetry analysis suggested that high proline levels, in combination with a relatively low content of osmotically active water and freeze dehydration, increased the propensity of the remaining unfrozen water to undergo a glass-like transition (vitrification) and thus facilitated the prevention of cryoinjury. PMID:21788482

Hyperprolinemic larvae of the drosophilid fly, Chymomyza costata, survive cryopreservation in liquid nitrogen.

PubMed

Kostál, Vladimír; Zahradnícková, Helena; Šimek, Petr

2011-08-09

The larva of the drosophilid fly, Chymomyza costata, is probably the most complex metazoan organism that can survive submergence in liquid nitrogen (-196 °C) in a fully hydrated state. We examined the associations between the physiological and biochemical parameters of differently acclimated larvae and their freeze tolerance. Entering diapause is an essential and sufficient prerequisite for attaining high levels of survival in liquid nitrogen (23% survival to adult stage), although cold acclimation further improves this capacity (62% survival). Profiling of 61 different metabolites identified proline as a prominent compound whose concentration increased from 20 to 147 mM during diapause transition and subsequent cold acclimation. This study provides direct evidence for the essential role of proline in high freeze tolerance. We increased the levels of proline in the larval tissues by feeding larvae proline-augmented diets and found that this simple treatment dramatically improved their freeze tolerance. Cell and tissue survival following exposure to liquid nitrogen was evident in proline-fed nondiapause larvae, and survival to adult stage increased from 0% to 36% in proline-fed diapause-destined larvae. A significant statistical correlation was found between the whole-body concentration of proline, either natural or artificial, and survival to the adult stage in liquid nitrogen for diapause larvae. Differential scanning calorimetry analysis suggested that high proline levels, in combination with a relatively low content of osmotically active water and freeze dehydration, increased the propensity of the remaining unfrozen water to undergo a glass-like transition (vitrification) and thus facilitated the prevention of cryoinjury.

Bioavailability of dissolved organic nitrogen (DON) in wastewaters from animal feedlots and storage lagoons

USDA-ARS?s Scientific Manuscript database

Dissolved organic nitrogen (DON) transport from animal agriculture to surface waters can lead to eutrophication and dissolved oxygen depletion. Biodegradable DON (BDON) is a portion of DON that is mineralized by bacteria while bioavailable DON (ABDON) is utilized by bacteria and/or algae. This stu...

77 FR 57985 - National Organic Program (NOP); Amendment to the National List of Allowed and Prohibited...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-19

... balance various interests including: (i) Providing for the basic maintenance requirements of organic... methionine in poultry diets reduced greenhouse gas production, reduced nitrogen waste and required less land... nitrogen excretion and an increase in ammonia levels in poultry houses. To address these concerns...

Field Comparison of Passive Air Samplers with Reference Monitors for Ambient Volatile Organic Compounds and Nitrogen Dioxide Under Week-Long Integrals

EPA Science Inventory

This study evaluates performance of nitrogen dioxide NO₂ and volatile organic compounds (VOC) passive samplers with corresponding reference monitors at two sites in the Detroit, Michigan area during the summer of 2005.

ISOTOPIC BIOGEOCHEMISTRY OF DISSOLVED ORGANIC NITROGEN: A NEW TECHNIQUE AND APPLICATION. (R825151)

EPA Science Inventory

We present a new technique for isolating and isotopically characterizing dissolved organic nitrogen (DON) for non-marine waters, ¹⁵N values for DON from lacustrine samples and data suggesting that this technique will be a...

A Self-Perpetuating Catalyst for the Production of Complex Organic Molecules in Protostellar Nebulae

NASA Technical Reports Server (NTRS)

Nuth, Joseph A.; Johnson, N. M.

2010-01-01

The formation of abundant carbonaceous material in meteorites is a long standing problem and an important factor in the debate on the potential for the origin of life in other stellar systems. Many mechanisms may contribute to the total organic content in protostellar nebulae, ranging from organics formed via ion-molecule and atom-molecule reactions in the cold dark clouds from which such nebulae collapse, to similar ion-molecule and atom-molecule reactions in the dark regions of the nebula far from the proto star, to gas phase reactions in sub-nebulae around growing giant planets and in the nebulae themselves. The Fischer-Tropsch-type (FTT) catalytic reduction of CO by hydrogen was once the preferred model for production of organic materials in the primitive solar nebula. The Haber-Bosch catalytic reduction of N2 by hydrogen was thought to produce the reduced nitrogen found in meteorites. However, the clean iron metal surfaces that catalyze these reactions are easily poisoned via reaction with any number of molecules, including the very same complex organics that they produce and both reactions work more efficiently in the hot regions of the nebula. We have demonstrated that many grain surfaces can catalyze both FTT and HB-type reactions, including amorphous iron and magnesium silicates, pure silica smokes as well as several minerals. Although none work as well as pure iron grains, and all produce a wide range of organic products rather than just pure methane, these materials are not truly catalysts.

Host and tissue variations overshadow the response of boreal moss-associated fungal communities to increased nitrogen load.

PubMed

Davey, Marie L; Skogen, Marte J; Heegaard, Einar; Halvorsen, Rune; Kauserud, Håvard; Ohlson, Mikael

2017-01-01

Human activity has more than doubled the amount of nitrogen entering the global nitrogen cycle, and the boreal forest biome is a nitrogen-limited ecosystem sensitive to nitrogen load perturbation. Although bryophyte-associated microbes contribute significantly to boreal forest ecosystem function, particularly in carbon and nitrogen cycling, little is known about their responses to anthropogenic global change. Amplicon pyrosequencing of the ITS2 region of rDNA was used to investigate how fungal communities associated with three bryophyte species responded to increased nitrogen loads in a long-term fertilization experiment in a boreal Picea abies forest in southern Norway. Overall, OTU richness, community composition and the relative abundance of specific ecological guilds were primarily influenced by host species identity and tissue type. Although not the primary factor affecting fungal communities, nitrogen addition did impact the abundance of specific guilds of fungi and the resulting overall community composition. Increased nitrogen loads decreased ectomycorrhizal abundance, with Amphinema, Cortinarius, Russula and Tylospora OTUs responding negatively to fertilization. Pathogen abundance increased with fertilization, particularly in the moss pathogen Eocronartium. Saprophytic fungi were both positively and negatively impacted by the nitrogen addition, indicating a complex community level response. The overshadowing of the effects of increased nitrogen loads by variation related to host and tissue type highlights the complexity of bryophyte-associated microbial communities and the intricate nature of their responses to anthropogenic global change. © 2016 John Wiley & Sons Ltd.

Leaf nitrogen remobilisation for plant development and grain filling.

PubMed

Masclaux-Daubresse, C; Reisdorf-Cren, M; Orsel, M

2008-09-01

A major challenge of modern agriculture is to reduce the excessive input of fertilisers and, at the same time, to improve grain quality without affecting yield. One way to achieve this goal is to improve plant nitrogen economy through manipulating nitrogen recycling, and especially nitrogen remobilisation, from senescing plant organs. In this review, the contribution of nitrogen remobilisation efficiency (NRE) to global nitrogen use efficiency (NUE), and tools dedicated to the determination of NRE are described. An overall examination of the physiological, metabolic and genetic aspects of nitrogen remobilisation is presented.

Poster 6: Influence of traces elements in the organic chemistry of upper atmosphere of Titan

NASA Astrophysics Data System (ADS)

Mathe, Christophe; Carrasco, Nathalie; Trainer, Melissa G.; Gautier, Thomas; Gavilan, Lisseth; Dubois, David; Li, Xiang

2016-06-01

In the upper atmosphere of Titan, complex chemistry leads to the formation of organic aerosols. Since the work of Khare et al. in 1984, several experiments investigated the formation of Titan aerosols, so called tholins, in the laboratory. It has been suggested that nitrogen-containing compounds may contribute significantly to the aerosols formation process. In this study, we focused on the influence of pyridine, the simplest nitrogenous aromatic hydrocarbon, on the chemistry of Titan's atmosphere and on aerosol formation. To assess the effect of pyridine on aerosol formation chemistry, we used two different experimental setups : a capacitively coupled radio-frequency (electronic impact), and a VUV Deuterium lamp (photochemistry) in a collaboration between LATMOS (Guyancourt) and NASA-GSFC (Greenbelt), respectively. Aerosols produced with both setups were first analyzed using a FTIR-ATR (Fourier Transform Infrared spectroscopy - Attenuated Total Reflection) with a spectral range of 4000-800 cm-1 to characterize their optical properties. Next the samples were analysed using a Bruker Autoflex Speed MALDI mass spectrometer with a m/z range up to 2000 Da in order to infer their composition. Infrared spectroscopy analysis showed that tholins produced with a nitrogen-methane gas mixture (95:5) and nitrogenpyridine gas mixture (99:250ppm) present very similar spectra features. Tholins produced with a mixture of nitrogenmethane-pyridine (99:1:250ppm) do not present aliphatic CH2 or CH3 vibrational signatures. This could indicate a cyclic polymerization by a pyridine skeleton. Mass spectrometry is still in progress to confirm this.

Restoration of fly ash dump through biological interventions.

PubMed

Juwarkar, Asha A; Jambhulkar, Hemlata P

2008-04-01

Field experiment on 10 ha area of fly ash dump was conducted to restore and revegetate it using biological interventions, which involves use of organic amendment, selection of suitable plant species along with specialized nitrogen fixing strains of biofertilizer. The results of the study indicated that amendment with farm yard manure at 50 t/ha improved the physical properties of fly ash such as maximum water holding capacity from 40.0 to 62.42% while porosity improved from 56.78 to 58.45%. The nitrogen content was increased by 4.5 times due to addition of nitrogen fixing strains of Bradyrhizobium and Azotobacter species, while phosphate content was increased by 10.0 times due to addition of VAM, which helps in phosphate immobilization. Due to biofertilizer inoculation different microbial groups such as Rhizobium, Azotobacter and VAM spores, which were practically absent in fly ash improved to 7.1 x 10(7), 9.2 x 10(7) CFU/g and 35 VAM spores/10 g of fly ash, respectively. Inoculation of biofertilizer and application of FYM helped in reducing the toxicity of heavy metals such as cadmium, copper, nickel and lead which were reduced by 25, 46, 48 and 47%, respectively, due to the increased organic matter content in the fly ash which complexes the heavy metals thereby decreasing the toxicity of metals. Amendment of fly ash with FYM and biofertilizer helped in profuse root development showing 15 times higher growth in Dendrocalamus strictus plant as compared to the control. Thus amendment and biofertilizer application provided better supportive material for anchorage and growth of the plant.

Computational modeling of Metal-Organic Frameworks

NASA Astrophysics Data System (ADS)

Sung, Jeffrey Chuen-Fai

In this work, the metal-organic frameworks MIL-53(Cr), DMOF-2,3-NH 2Cl, DMOF-2,5-NH2Cl, and HKUST-1 were modeled using molecular mechanics and electronic structure. The effect of electronic polarization on the adsorption of water in MIL-53(Cr) was studied using molecular dynamics simulations of water-loaded MIL-53 systems with both polarizable and non-polarizable force fields. Molecular dynamics simulations of the full systems and DFT calculations on representative framework clusters were utilized to study the difference in nitrogen adsorption between DMOF-2,3-NH2Cl and DMOF-2,5-NH 2Cl. Finally, the control of proton conduction in HKUST-1 by complexation of molecules to the Cu open metal site was investigated using the MS-EVB methodology.

Manganese(II), iron(II), cobalt(II), and copper(II) complexes of an extended inherently chiral tris-bipyridyl cage.

PubMed

Perkins, David F; Lindoy, Leonard F; McAuley, Alexander; Meehan, George V; Turner, Peter

2006-01-17

Manganese(II), iron(II), cobalt(II), and copper(II) derivatives of two inherently chiral, Tris(bipyridyl) cages (L and L') of type [ML]-(PF(6))(2)(solvent)(n) and [FeL'](ClO(4))(2) are reported, where L is the hexa-tertiary butyl-substituted derivative of L'. These products were obtained by using the free cage and metal template procedures; the latter involved the reductive amination of the respective Tris-dialdehyde precursor complexes of iron(II), cobalt(II), or nickel(II). Electrochemical, EPR, and NMR studies have been used to probe the nature of the individual complexes. X-ray structures of the manganese(II), iron(II), and copper(II) complexes of L and the iron(II) complex of L' are presented; these are compared with the previously reported structures of the corresponding nickel(II) complex and metal-free cage (L). In each complex the metal cation occupies the cage's central cavity and is coordinated to six nitrogens from the three bipyridyl groups. The cations [MnL](2+) and [FeL](2+) are isostructural but both exhibit a different arrangement of the bound cage to that observed in the corresponding nickel(II) and copper(II) complexes. The latter have an exo-exo arrangement of the bridgehead nitrogen lone pairs, with the metal inducing a triple helical twist that extends approximately 22 A along the axial length of each complex. In contrast, [MnL](2+) and [FeL](2+) have their terminal nitrogen lone pairs directed endo, causing a significant change in the configuration of the bound ligand. In [FeL'](2+), the cage has both bridgehead nitrogen lone pairs orientated exo. Semiempirical calculations indicate that the observed endo-endo and exo-exo arrangements are of comparable energy.

Gross Nitrogen Mineralization in Surface Sediments of the Yangtze Estuary

PubMed Central

Liu, Min; Li, Xiaofei; Yin, Guoyu; Zheng, Yanling; Deng, Fengyu

2016-01-01

Nitrogen mineralization is a key biogeochemical process transforming organic nitrogen to inorganic nitrogen in estuarine and coastal sediments. Although sedimentary nitrogen mineralization is an important internal driver for aquatic eutrophication, few studies have investigated sedimentary nitrogen mineralization in these environments. Sediment-slurry incubation experiments combined with 15N isotope dilution technique were conducted to quantify the potential rates of nitrogen mineralization in surface sediments of the Yangtze Estuary. The gross nitrogen mineralization (GNM) rates ranged from 0.02 to 5.13 mg N kg-1 d-1 in surface sediments of the study area. The GNM rates were generally higher in summer than in winter, and the relative high rates were detected mainly at sites near the north branch and frontal edge of this estuary. The spatial and temporal distributions of GNM rates were observed to depend largely on temperature, salinity, sedimentary organic carbon and nitrogen contents, and extracellular enzyme (urease and L-glutaminase) activities. The total mineralized nitrogen in the sediments of the Yangtze Estuary was estimated to be about 6.17 × 105 t N yr-1, and approximately 37% of it was retained in the estuary. Assuming the retained mineralized nitrogen is totally released from the sediments into the water column, which contributed 12–15% of total dissolved inorganic nitrogen (DIN) sources in this study area. This result indicated that the mineralization process is a significant internal nitrogen source for the overlying water of the Yangtze Estuary, and thus may contribute to the estuarine and coastal eutrophication. PMID:26991904

New molecular insights into the pools and mechanisms of Arctic soil organic matter decomposition under warming

NASA Astrophysics Data System (ADS)

Gu, B.

2017-12-01

It is estimated that Arctic permafrost soils store approximately half of the global belowground organic carbon, which is susceptible to microbial decomposition under warming climate. Studies have shown that rates of soil organic carbon (SOC) decomposition are controlled not only by temperature but also SOC substrate quality or chemical composition. However, detailed molecular-scale characterization of SOC and its susceptibility to degradation are lacking, due to extremely complex nature of SOC. Here, ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) was utilized to determine compositional changes of SOC during a microcosm warming experiment using tundra soils that were collected from the Barrow Environmental Observatory in Alaska, USA. Soil microcosm incubation was conducted with both organic and mineral active layer soils at two temperatures (-2°C and 8°C) up to 122 days, and water-extractable SOC was analyzed. Results indicate that peptides, amino sugars, and carbohydrate-like compounds are among the most labile SOC compounds to be degraded, with nitrogen-containing compounds degrading at a much faster rate than those containing no nitrogen. Refractory SOC components are dominated by the lignin- or tannin-like compounds and, to a less extent, the aliphatic compounds. Additionally, elemental ratios of O:C, H:C, and N:C were found to decrease with incubation time, and SOC in the mineral soil exhibited lower O:C and N:C ratios than those of the organic-rich soil. A biodegradation index is proposed to facilitate the incorporation of mass spectrometry data into mechanistic models of SOC degradation and thus improved prediction model of climate feedbacks in the Arctic.

New molecular insights into the pools and mechanisms of Arctic soil organic matter decomposition under warming

NASA Astrophysics Data System (ADS)

Gilbert, A.; Yamada, K.; Julien, M.; Yoshida, N.; Remaud, G.; Robins, R.

2016-12-01

It is estimated that Arctic permafrost soils store approximately half of the global belowground organic carbon, which is susceptible to microbial decomposition under warming climate. Studies have shown that rates of soil organic carbon (SOC) decomposition are controlled not only by temperature but also SOC substrate quality or chemical composition. However, detailed molecular-scale characterization of SOC and its susceptibility to degradation are lacking, due to extremely complex nature of SOC. Here, ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) was utilized to determine compositional changes of SOC during a microcosm warming experiment using tundra soils that were collected from the Barrow Environmental Observatory in Alaska, USA. Soil microcosm incubation was conducted with both organic and mineral active layer soils at two temperatures (-2°C and 8°C) up to 122 days, and water-extractable SOC was analyzed. Results indicate that peptides, amino sugars, and carbohydrate-like compounds are among the most labile SOC compounds to be degraded, with nitrogen-containing compounds degrading at a much faster rate than those containing no nitrogen. Refractory SOC components are dominated by the lignin- or tannin-like compounds and, to a less extent, the aliphatic compounds. Additionally, elemental ratios of O:C, H:C, and N:C were found to decrease with incubation time, and SOC in the mineral soil exhibited lower O:C and N:C ratios than those of the organic-rich soil. A biodegradation index is proposed to facilitate the incorporation of mass spectrometry data into mechanistic models of SOC degradation and thus improved prediction model of climate feedbacks in the Arctic.

Dissection of Symbiosis and Organ Development by Integrated Transcriptome Analysis of Lotus japonicus Mutant and Wild-Type Plants

PubMed Central

Høgslund, Niels; Radutoiu, Simona; Krusell, Lene; Voroshilova, Vera; Hannah, Matthew A.; Goffard, Nicolas; Sanchez, Diego H.; Lippold, Felix; Ott, Thomas; Sato, Shusei; Tabata, Satoshi; Liboriussen, Poul; Lohmann, Gitte V.; Schauser, Leif; Weiller, Georg F.; Udvardi, Michael K.; Stougaard, Jens

2009-01-01

Genetic analyses of plant symbiotic mutants has led to the identification of key genes involved in Rhizobium-legume communication as well as in development and function of nitrogen fixing root nodules. However, the impact of these genes in coordinating the transcriptional programs of nodule development has only been studied in limited and isolated studies. Here, we present an integrated genome-wide analysis of transcriptome landscapes in Lotus japonicus wild-type and symbiotic mutant plants. Encompassing five different organs, five stages of the sequentially developed determinate Lotus root nodules, and eight mutants impaired at different stages of the symbiotic interaction, our data set integrates an unprecedented combination of organ- or tissue-specific profiles with mutant transcript profiles. In total, 38 different conditions sampled under the same well-defined growth regimes were included. This comprehensive analysis unravelled new and unexpected patterns of transcriptional regulation during symbiosis and organ development. Contrary to expectations, none of the previously characterized nodulins were among the 37 genes specifically expressed in nodules. Another surprise was the extensive transcriptional response in whole root compared to the susceptible root zone where the cellular response is most pronounced. A large number of transcripts predicted to encode transcriptional regulators, receptors and proteins involved in signal transduction, as well as many genes with unknown function, were found to be regulated during nodule organogenesis and rhizobial infection. Combining wild type and mutant profiles of these transcripts demonstrates the activation of a complex genetic program that delineates symbiotic nitrogen fixation. The complete data set was organized into an indexed expression directory that is accessible from a resource database, and here we present selected examples of biological questions that can be addressed with this comprehensive and powerful gene expression data set. PMID:19662091

Flux of particulate matter through copepods in the Northeast water polynya

NASA Astrophysics Data System (ADS)

Daly, Kendra L.

1997-01-01

Particulate organic carbon (POC) and nitrogen (PON) production by large calanoid copepods was investigated on the northeast Greenland shelf during August 1992 and May to August 1993. Both Calanus hyperboreus and C. glacialis females, when suspended in seawater collected from the chlorophyll maximum, produced about 40 pellets per day, which contained a carbon and nitrogen content equivalent to 8% and 6% of body carbon, respectively, and 2% of body nitrogen. In experiments, the carbon:nitrogen (C:N) ratio by weight of suspended particulates, C. hyperboreus, and fecal pellets was 6.7, 7.7 and 28.5, respectively. The unusually high C:N ratio for pellets, in part, may be attributed to elevated ratios of > 20μm size fractions of particulate organic matter, the size fraction more common in the diet of these large copepods and the fraction dominated by diatoms according to microscopic and pigment data. The implied elevated C:N ratios of large phytoplankton cells were probably due to nitrogen deficiency, as shown by other studies in this region. In addition, female C. hyperboreus appeared to be more efficient in assimilating nitrogen than carbon, which also would have contributed to high C:N ratios in egested pellets. Unfractionated POC concentrations explained 54% of the variability in carbon egestion and 70% of the variability in nitrogen egestion in copepods, whereas copepod body content accounted for little of the variation on the short time scales of the experiments. Carbon egestion by C. hyperboreus was positively correlated with POC concentrations at the depth of the chlorophyll maximum, while nitrogen egestion was negatively correlated with PON concentrations in the euphotic zone. Estimates of potential community egestion rates for the upper water column indicate that copepods represent a major pathway of organic carbon transformation in this Arctic shelf system. On average, copepods may have ingested 45% of the primary production and egested fecal matter equivalent to 20% of the carbon and 12% of the nitrogen particulate flux sedimenting from the surface layer. However, several lines of evidence suggest that pellets were remineralized in the water column and, hence, may have contributed little organic carbon and nitrogen to the benthos.

Selections from 2017: Discoveries in Titan's Atmosphere

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2017-12-01

Editors note:In these last two weeks of 2017, well be looking at a few selections that we havent yet discussed on AAS Nova from among the most-downloaded paperspublished in AAS journals this year. The usual posting schedule will resume in January.Carbon Chain Anions and the Growth of Complex Organic Molecules in Titans IonospherePublished July2017Main takeaway:Graphic depicting some of the chemical reactions taking place in Titans atmosphere, leading to the generation of organic haze particles. [ESA]In a recently published study led by Ravi Desai (University College London), scientists used data from the Cassini mission to identify negatively charged molecules known as carbon chain anions in the atmosphere of Saturns largest moon, Titan.Why its interesting:Carbon chain anions are the building blocks ofmore complex molecules, and Titans thick nitrogen and methane atmosphere mightmimic the atmosphere of earlyEarth. This first unambiguous detection of carbon chain anions in a planet-like atmosphere might therefore teach us about the conditions and chemical reactions that eventually led to the development of life on Earth. And ifwe can use Titan to learn about how complex molecules grow from these anion chains, we may be able to identify auniversal pathway towards the ingredients for life.What weve learned so far:Cassini measured fewer and fewer lower-mass anions the deeper in Titans ionosphere that it looked and at the same time,an increase in the number of precursors to larger aerosol molecules further down. This tradeoff strongly suggests that the anions are indeed involved in building up the more complex molecules, seeding their eventual growth into the complex organic haze of Titans lower atmosphere.CitationR. T. Desai et al 2017 ApJL 844 L18. doi:10.3847/2041-8213/aa7851

Microbial metabolism of Tholin

NASA Technical Reports Server (NTRS)

Stoker, C. R.; Mancinelli, R. L.; Boston, P. J.; Segal, W.; Khare, B. N.

1990-01-01

Tholin, a class of complex organic heteropolymers hypothesized to possess wide solar system distribution, is shown to furnish the carbon and energy requirements of a wide variety of common soil bacteria which encompasses aerobic, anaerobic, and facultatively anaerobic bacteria. Some of these bacteria are able to derive not merely their carbon but also their nitrogen requirements from tholin. The palatability of tholins to modern microbes is speculated to have implications for the early evolution of microbial life on earth; tholins may have formed the base of the food chain for an early heterotrophic biosphere, prior to the evolution of autotrophy on the early earth.

Alkaline-earth metal carboxylates characterized by 43Ca and 87Sr solid-state NMR: impact of metal-amine bonding.

PubMed

Burgess, Kevin M N; Xu, Yang; Leclerc, Matthew C; Bryce, David L

2014-01-06

A series of calcium and strontium complexes featuring aryl carboxylate ligands has been prepared and characterized by alkaline-earth ((43)Ca and (87)Sr) solid-state NMR experiments in a magnetic field of 21.1 T. In the 11 compounds studied as part of this work, a range of coordination motifs are observed including nitrogen atom binding to Ca(2+) and Sr(2+), a binding mode which has not been investigated previously by (43)Ca or (87)Sr solid-state NMR. (43)Ca isotopic enrichment has enabled the full characterization of the (43)Ca electric field gradient (EFG) and chemical shift tensors of the two calcium sites in calcium p-aminosalicylate (Ca(pams)), where both NMR interactions are affected by the presence of a nitrogen atom in the first coordination sphere of one of the metal sites. The (43)Ca isotropic chemical shift is sensitive to the Ca-N distance as exemplified by the NMR parameters of a second form of Ca(pams) and density functional theory (DFT) calculations. Studies of the strontium analogue, Sr(pams), confirm a similar sensitivity of the (87)Sr EFG tensor to the presence or absence of nitrogen in the first coordination sphere. To our knowledge, this is the first systematic (87)Sr NMR study of strontium complexes featuring organic ligands. The |CQ((87)Sr)| values are found to be sensitive to the coordination number about Sr(2+). In general, this work has also established a larger data set of reliable experimental |CQ((43)Ca)| values which correlate well with those obtained using gauge-including projector-augmented-wave (GIPAW) DFT calculations. It is found that the use of a recently recommended quadrupole moment for (43)Ca, -44.4 mbarn, improves the agreement with experimental values. This contribution lays the groundwork for the interpretation of (43)Ca and (87)Sr NMR spectra of more challenging systems, particularly where nitrogen-alkaline earth metal bonding is occurring.

Factors influencing the characteristics and distribution or surface organic matter in the Pacific-Atlantic connection

NASA Astrophysics Data System (ADS)

Barrera, Facundo; Lara, Rubén J.; Krock, Bernd; Garzón-Cardona, John Edison; Fabro, Elena; Koch, Boris P.

2017-11-01

The present work reports the first data set on particulate organic carbon (POC) and nitrogen (PON), and the high-resolution modelling of their stable isotope variability in the Patagonian Cold Estuarine System (PCES), with focus on particulate organic matter (POM) origin and distribution in dependence on physical, chemical and biological parameters. POC, PON, stable carbon (δ13C) and nitrogen isotopes (δ15N), dissolved organic nitrogen, phaeopigments, diatom, dinoflagellate and heterotrophic bacteria (HB) abundance are reported for 17 stations in different waters masses in the southern end of the Argentine shelf in late summer 2012. Most parameters denote clear differences between Beagle - Magellan Water (BMW), Subantarctic Shelf Water (SSW) and Subantarctic Water (SAW). POC and PON decreased from maxima in BMW to intermediate values in SSW and minima in SAW. There was a highly significant correlation among POC, PON and fluorescence indicators of diagenetic maturity of dissolved humic matter. This, together with the inverse correlations of salinity with POC and PON, and the wide range of C:N ratios indicate that POM in the study area is partly derived from terrestrial runoff, superimposed by autochthonous components from plankton of different life stages. HB abundance was significantly correlated with POC and dissolved organic matter (DOM), likely reflecting a resource control of HB and a significant contribution of bacterial biomass to POM in the nanoparticle fraction. The direct relationship between HB and dissolved humics suggests bacterial uptake of DOM fractions otherwise considered refractory. POM complexity was reflected in a wide variation of δ13C, despite the narrow temperature range of this region. The variability of stable isotopes of POC could be accounted for by a model with a degree of detail hitherto not reported in the literature. A multiple regression including C:N ratio, ammonium and the quotient between log abundance of diatoms, dinoflagellates and HB explained 92% of δ13C variance, mostly produced by ammonium. Despite the strong effect of ammonium on δ13C, δ15N variability was largely explained by a strong inverse relationship with the fraction of unutilized nitrate, suggesting dominance of nitrate uptake. However, the proportion of presumably isotopically heavier ammonium derived from continental runoff in the marine δ15N-POM pool is unknown and requires investigation of the isotopic composition of dissolved inorganic nitrogen in the PCES. The presented new information and its comparison with data from other sectors of the Argentine shelf constitute a contribution to an approach for the understanding of the organic matter dynamics that can be potentially expanded to the entire Southwest Atlantic.

Probing the coordination environment of Ti(3+) ions coordinated to nitrogen-containing Lewis bases.

PubMed

Morra, E; Maurelli, S; Chiesa, M; Van Doorslaer, S

2015-08-28

Multi-frequency continuous-wave and pulsed EPR techniques are employed to investigate the coordination of nitrogen-containing ligands to Ti(3+)-chloro complexes. Frozen solutions of TiCl3 and TiCl3(Py)3 dissolved in nitrogen-containing solvents have been investigated together with the TiCl3(Py)3 solid-state complex. For these different systems, the hyperfine and nuclear quadrupole data of Ti(3+)-bound (14)N nuclei are reported and discussed in the light of DFT computations, allowing for a detailed description of the microscopic structure of these systems.

Evidence of Anomalously Low δ13C of Marine Organic Matter in an Arctic Fjord.

PubMed

Kumar, Vikash; Tiwari, Manish; Nagoji, Siddhesh; Tripathi, Shubham

2016-11-09

Accurate estimation of relative carbon deposition (marine vs. terrestrial) is required for understanding the global carbon budget, particularly in the Arctic region, which holds disproportionate importance with respect to global carbon cycling. Although the sedimentary organic matter (SOM) concentration and its isotopic composition are important tools for such calculations, uncertainties loom over estimates provided by organic-geochemical bulk parameters. We report carbon and nitrogen concentrations and isotopes (δ 13 C and δ 15 N) of SOM at an Arctic fjord namely Kongsfjorden. We find that the bound inorganic nitrogen (ammonium attached to the clay minerals) forms a significant proportion of total nitrogen concentration (~77% in the inner fjord to ~24% in the outer part). On removing the bound nitrogen, the C/N ratio shows that the SOM in the inner fjord is made up of terrestrial carbon while the outer fjord shows mixed marine-terrestrial signal. We further show that the marine organic matter is unusually more depleted in 13 C (~-24‰) than the terrestrial organic matter (~-22.5‰). This particular finding also helps explain high δ 13 C values of SOM as noted by earlier studies in central Arctic sediments despite a high terrestrial contribution.

Nitrogen reduction pathways in estuarine sediments: Influences of organic carbon and sulfide

NASA Astrophysics Data System (ADS)

Plummer, Patrick; Tobias, Craig; Cady, David

2015-10-01

Potential rates of sediment denitrification, anaerobic ammonium oxidation (anammox), and dissimilatory nitrate reduction to ammonium (DNRA) were mapped across the entire Niantic River Estuary, CT, USA, at 100-200 m scale resolution consisting of 60 stations. On the estuary scale, denitrification accounted for ~ 90% of the nitrogen reduction, followed by DNRA and anammox. However, the relative importance of these reactions to each other was not evenly distributed through the estuary. A Nitrogen Retention Index (NIRI) was calculated from the rate data (DNRA/(denitrification + anammox)) as a metric to assess the relative amounts of reactive nitrogen being recycled versus retained in the sediments following reduction. The distribution of rates and accompanying sediment geochemical analytes suggested variable controls on specific reactions, and on the NIRI, depending on position in the estuary and that these controls were linked to organic carbon abundance, organic carbon source, and pore water sulfide concentration. The relationship between NIRI and organic carbon abundance was dependent on organic carbon source. Sulfide proved the single best predictor of NIRI, accounting for 44% of its observed variance throughout the whole estuary. We suggest that as a single metric, sulfide may have utility as a proxy for gauging the distribution of denitrification, anammox, and DNRA.

Evaluating Multipollutant Exposure and Urban Air Quality: Pollutant Interrelationships, Neighborhood Variability, and Nitrogen Dioxide as a Proxy Pollutant

PubMed Central

Levy, Ilan; Mihele, Cristian; Lu, Gang; Narayan, Julie; Brook, Jeffrey R.

2013-01-01

Background: Although urban air pollution is a complex mix containing multiple constituents, studies of the health effects of long-term exposure often focus on a single pollutant as a proxy for the entire mixture. A better understanding of the component pollutant concentrations and interrelationships would be useful in epidemiological studies that exploit spatial differences in exposure by clarifying the extent to which measures of individual pollutants, particularly nitrogen dioxide (NO2), represent spatial patterns in the multipollutant mixture. Objectives: We examined air pollutant concentrations and interrelationships at the intraurban scale to obtain insight into the nature of the urban mixture of air pollutants. Methods: Mobile measurements of 23 air pollutants were taken systematically at high resolution in Montreal, Quebec, Canada, over 34 days in the winter, summer, and autumn of 2009. Results: We observed variability in pollution levels and in the statistical correlations between different pollutants according to season and neighborhood. Nitrogen oxide species (nitric oxide, NO2, nitrogen oxides, and total oxidized nitrogen species) had the highest overall spatial correlations with the suite of pollutants measured. Ultrafine particles and hydrocarbon-like organic aerosol concentration, a derived measure used as a specific indicator of traffic particles, also had very high correlations. Conclusions: Our findings indicate that the multipollutant mix varies considerably throughout the city, both in time and in space, and thus, no single pollutant would be a perfect proxy measure for the entire mix under all circumstances. However, based on overall average spatial correlations with the suite of pollutants measured, nitrogen oxide species appeared to be the best available indicators of spatial variation in exposure to the outdoor urban air pollutant mixture. Citation: Levy I, Mihele C, Lu G, Narayan J, Brook JR. 2014. Evaluating multipollutant exposure and urban air quality: pollutant interrelationships, neighborhood variability, and nitrogen dioxide as a proxy pollutant. Environ Health Perspect 122:65–72; http://dx.doi.org/10.1289/ehp.1306518 PMID:24225648

Atmospheric nitrogen deposition in south-east Scotland: Quantification of the organic nitrogen fraction in wet, dry and bulk deposition

NASA Astrophysics Data System (ADS)

González Benítez, Juan M.; Cape, J. Neil; Heal, Mathew R.; van Dijk, Netty; Díez, Alberto Vidal

Water soluble organic nitrogen (WSON) compounds are ubiquitous in precipitation and in the planetary boundary layer, and therefore are a potential source of bioavailable reactive nitrogen. This paper examines weekly rain data over a period of 22 months from June 2005 to March 2007 collected in 2 types of rain collector (bulk deposition and "dry + wet" deposition) located in a semi-rural area 15 km southwest of Edinburgh, UK (N55°51'44″, W3°12'19″). Bulk deposition collectors are denoted in this paper as "standard rain gauges", and they are the design used in the UK national network for monitoring precipitation composition. "Dry + wet" deposition collectors are flushing rain gauges and they are equipped with a rain detector (conductivity array), a spray nozzle, a 2-way valve and two independent bottles to collect funnel washings (dry deposition) and true wet deposition. On average, for the 27 weekly samples with 3 valid replicates for the 2 types of collectors, dissolved organic nitrogen (DON) represented 23% of the total dissolved nitrogen (TDN) in bulk deposition. Dry deposition of particles and gas on the funnel surface, rather than rain, contributed over half of all N-containing species (inorganic and organic). Some discrepancies were found between bulk rain gauges and flushing rain gauges, for deposition of both TDN and DON, suggesting biological conversion and loss of inorganic N in the flushing samplers.

Relationship between carbon and nitrogen mineralization in a subtropical soil

NASA Astrophysics Data System (ADS)

Li, Qianru; Sun, Yue; Zhang, Xinyu; Xu, Xingliang; Kuzyakov, Yakov

2014-05-01

In most soils, more than 90% nitrogen is bonded with carbon in organic forms. This indicates that carbon mineralization should be closely coupled with nitrogen mineralization, showing a positive correlation between carbon and nitrogen mineralization. To test this hypothesis above, we conducted an incubation using a subtropical soil for 10 days at 15 °C and 25 °C. 13C-labeled glucose and 15N-labeled ammonium or nitrate was used to separate CO2 and mineral N released from mineralization of soil organic matter and added glucose or inorganic nitrogen. Phospholipid fatty acid (PLFA) and four exoenzymes (i.e. β-1,4- Glucosaminidase, chitinase, acid phosphatase, β-1,4-N- acetyl glucosamine glycosidase) were also analyzed to detect change in microbial activities during the incubation. Our results showed that CO2 release decreased with increasing nitrogen mineralization rates. Temperature did not change this relationship between carbon and nitrogen mineralization. Although some changes in PLFA and the four exoenzymes were observed, these changes did not contribute to changes in carbon and nitrogen mineralization. These findings indicates that carbon and nitrogen mineralization in soil are more complicated than as previously expected. Future investigation should focus on why carbon and nitrogen mineralization are coupled in a negative correlation not in a positive correlation in many soils for a better understanding of carbon and nitrogen transformation during their mineralization.

Self-organized nitrogen and fluorine co-doped titanium oxide nanotube arrays with enhanced visible light photocatalytic performance.

PubMed

Li, Qi; Shang, Jian Ku

2009-12-01

Self-organized nitrogen and fluorine co-doped titanium oxide (TiONF) nanotube arrays were created by anodizing titanium foil in a fluoride and ammoniate-based electrolyte, followed by calcination of the amorphous nanotube arrays under a nitrogen protective atmosphere for crystallization. TiONF nanotube arrays were found to have enhanced visible light absorption capability and photodegradation efficiency on methylene blue under visible light illumination over the TiO(2) nanotube arrays. The enhancement was dependent on both the nanotube structural architecture and the nitrogen and fluorine co-doping effect. TiONF nanotube arrays promise a wide range of technical applications, especially for environmental applications and solar cell devices.

Organic nitrogen components in soils from southeast China*

PubMed Central

Chen, Xian-you; Wu, Liang-huan; Cao, Xiao-chuang; Zhu, Yuan-hong

2013-01-01

Objective: To investigate the amounts of extractable organic nitrogen (EON), and the relationships between EON and total extractable nitrogen (TEN), especially the amino acids (AAs) adsorbed by soils, and a series of other hydrolyzed soil nitrogen indices in typical land use soil types from southeast China. Under traditional agricultural planting conditions, the functions of EON, especially AAs in the rhizosphere and in bulk soil zones were also investigated. Methods: Pot experiments were conducted using plants of pakchoi (Brassica chinensis L.) and rice (Oryza sativa L.). In the rhizosphere and bulk soil zone studies, organic nitrogen components were extracted with either distilled water, 0.5 mol/L K2SO4 or acid hydrolysis. Results: K2SO4-EON constituted more than 30% of TEN pools. K2SO4-extractable AAs accounted for 25% of EON pools and nearly 10% of TEN pools in rhizosphere soils. Overall, both K2SO4-EON and extractable AAs contents had positive correlations with TEN pools. Conclusions: EON represented a major component of TEN pools in garden and paddy soils under traditional planting conditions. Although only a small proportion of the EON was present in the form of water-extractable and K2SO4-extractable AAs, the release of AAs from soil exchangeable sites might be an important source of organic nitrogen (N) for plant growth. Our findings suggest that the content of most organic forms of N was significantly greater in rhizosphere than in bulk soil zone samples. However, it was also apparent that the TEN pool content was lower in rhizosphere than in bulk soil samples without added N. PMID:23549843

Functional ecology of soil microbial communities along a glacier forefield in Tierra del Fuego (Chile).

PubMed

Fernández-Martínez, Miguel A; Pointing, Stephen B; Pérez-Ortega, Sergio; Arróniz-Crespo, María; Green, T G Allan; Rozzi, Ricardo; Sancho, Leopoldo G; de Los Ríos, Asunción

2016-09-01

A previously established chronosequence from Pia Glacier forefield in Tierra del Fuego (Chile) containing soils of different ages (from bare soils to forest ones) is analyzed. We used this chronosequence as framework to postulate that microbial successional development would be accompanied by changes in functionality. To test this, the GeoChip functional microarray was used to identify diversity of genes involved in microbial carbon and nitrogen metabolism, as well as other genes related to microbial stress response and biotic interactions. Changes in putative functionality generally reflected succession-related taxonomic composition of soil microbiota. Major shifts in carbon fixation and catabolism were observed, as well as major changes in nitrogen metabolism. At initial microbial dominated succession stages, microorganisms could be mainly involved in pathways that help to increase nutrient availability, while more complex microbial transformations such as denitrification and methanogenesis, and later degradation of complex organic substrates, could be more prevalent at vegetated successional states. Shifts in virus populations broadly reflected changes in microbial diversity. Conversely, stress response pathways appeared relatively well conserved for communities along the entire chronosequence. We conclude that nutrient utilization is likely the major driver of microbial succession in these soils. [Int Microbiol 19(3):161-173 (2016)]. Copyright© by the Spanish Society for Microbiology and Institute for Catalan Studies.

SOURCES AND TRANSFORMATIONS OF NITROGEN, CARBON, AND PHOSPHORUS IN THE POTOMAC RIVER ESTUARY

NASA Astrophysics Data System (ADS)

Pennino, M. J.; Kaushal, S.

2009-12-01

Global transport of nitrogen (N), carbon (C), and phosphorus (P) in river ecosystems has been dramatically altered due to urbanization. We examined the capacity of a major tributary of the Chesapeake Bay, the Potomac River, to transform carbon, nitrogen, and phosphorus inputs from the world’s largest advanced wastewater treatment facility (Washington D.C. Water and Sewer Authority). Surface water and effluent samples were collected along longitudinal transects of the Potomac River seasonally and compared to long-term interannual records of carbon, nitrogen, and phosphorus. Water samples from seasonal longitudinal transects were analyzed for dissolved organic and inorganic nitrogen and phosphorus, total organic carbon, and particulate carbon, nitrogen, and phosphorus. The source and quality of organic matter was characterized using fluorescence spectroscopy, excitation emission matrices (EEMs), and PARAFAC modeling. Sources of nitrate were tracked using stable isotopes of nitrogen and oxygen. Along the river network stoichiometric ratios of C, N, and P were determined across sites and related to changes in flow conditions. Land use data and historical water chemistry data were also compared to assess the relative importance of non-point sources from land-use change versus point-sources of carbon, nitrogen, and phosphorus. Preliminary data from EEMs suggested that more humic-like organic matter was important above the wastewater treatment plant, but more protein-like organic matter was present below the treatment plant. Levels of nitrate and ammonia showed increases within the vicinity of the wastewater treatment outfall, but decreased rapidly downstream, potentially indicating nutrient uptake and/or denitrification. Phosphate levels decreased gradually along the river with a small increase near the wastewater treatment plant and a larger increase and decrease further downstream near the high salinity zone. Total organic carbon levels show a small decrease downstream. Ecological stoichiometric ratios along the river indicate increases in C/N ratios downstream, but no corresponding trend with C/P ratios. The N/P ratios increased directly below the treatment plant and then decreased gradually downstream. The C/N/P ratios remained level until the last two sampling stations within 20 miles of the Chesapeake Bay, where there is a large increase. Despite large inputs, there may be large variations in sources and ecological stoichiometry along rivers and estuaries, and knowledge of these transformations will be important in predicting changes in the amounts, forms, and stoichiometry of nutrient loads to coastal waters.

Nitrogen dynamics in organic and conventional cotton production systems in India

NASA Astrophysics Data System (ADS)

Duboc, O.; Adamtey, N.; Forster, D.; Cadisch, G.

2012-04-01

Ongoing population growth still represents a challenge to agricultural production (food, fiber and fuel material supply). In spite of the undeniable achievements reached with the "green revolution" technologies, there is a growing awareness among scientists and policy makers that diverse and integrated approaches which are both productive and sustainable are now necessary to meet the agricultural challenges. Integrated and organic agriculture are such alternatives which need to be better investigated and implemented. While long-term experiments in temperate regions have assessed the effect of organic agriculture on different crops and soil quality, there is currently a lack of reliable data from tropical regions, such as findings arising from long-term systems comparison trials. This has necessitated a long-term system comparison trials in Kenya, Bolivia and India by the Research Institute of Organic Agriculture (FiBL) and its partners (icipe, BioRe, Ecotop and Institute of Ecology) (www.systems-comparison.fibl.org). In India the project is based in Madhya Pradesh, in which organic and conventional production systems are being compared in a 2-yr crop rotation - cotton (yr 1) and soybean-wheat (yr 2). The field trial is planned for a time span of 10-20 years, in order to investigate long-term effects of those production systems on yields, soil characteristics, or economic return. A PhD study is incorporated into this project to investigate the effect of the production systems on soil characteristics. The main focus will be on nitrogen cycling under the different production systems. Particular attention will be given to nitrogen use efficiencies and the synchrony of nitrogen availability (e.g. nitrogen mineralization with the polyethylene bag technique, monitoring of soil mineral N) with plant nitrogen uptake, for which allometric equations will be calibrated in order to circumvent destructive sampling on the plots of the long-term experiment. Nitrogen losses - leaching and gaseous emissions - will also be investigated with methods such as buried ion exchange resin cores and gas sampling in the field. Furthermore, the project will test management solutions to improve nitrogen use efficiencies in both, organic and conventional systems, such as the introduction of leguminous intercrops in cotton, which is the main cash crop in the system and which also has the highest requirements for fertilization. This poster thus mainly discusses methodic issues relating to the planned study.

Reduction of nitrogen excretion and emission in poultry: A review for organic poultry.

PubMed

Chalova, Vesela I; Kim, Jihyuk; Patterson, Paul H; Ricke, Steven C; Kim, Woo K

2016-01-01

Organic poultry is an alternative to conventional poultry which is rapidly developing as a response to customers' demand for better food and a cleaner environment. Although organic poultry manure can partially be utilized by organic horticultural producers, litter accumulation as well as excessive nitrogen still remains a challenge to maintain environment pureness, animal, and human health. Compared to conventional poultry, diet formulation without nitrogen overloading in organic poultry is even more complicated due to specific standards and regulations which limit the application of some supplements and imposes specific criteria to the ingredients in use. This is especially valid for methionine provision which supplementation as a crystalline form is only temporarily allowed. This review is focused on the utilization of various protein sources in the preparation of a diet composed of 100% organic ingredients which meet the avian physiology need for methionine, while avoiding protein overload. The potential to use unconventional protein sources such as invertebrates and microbial proteins to achieve optimal amino acid provision is also discussed.

Dynamics of Marine Microbial Metabolism and Physiology at Station ALOHA

NASA Astrophysics Data System (ADS)

Casey, John R.

Marine microbial communities influence global biogeochemical cycles by coupling the transduction of free energy to the transformation of Earth's essential bio-elements: H, C, N, O, P, and S. The web of interactions between these processes is extraordinarily complex, though fundamental physical and thermodynamic principles should describe its dynamics. In this collection of 5 studies, aspects of the complexity of marine microbial metabolism and physiology were investigated as they interact with biogeochemical cycles and direct the flow of energy within the Station ALOHA surface layer microbial community. In Chapter 1, and at the broadest level of complexity discussed, a method to relate cell size to metabolic activity was developed to evaluate allometric power laws at fine scales within picoplankton populations. Although size was predictive of metabolic rates, within-population power laws deviated from the broader size spectrum, suggesting metabolic diversity as a key determinant of microbial activity. In Chapter 2, a set of guidelines was proposed by which organic substrates are selected and utilized by the heterotrophic community based on their nitrogen content, carbon content, and energy content. A hierarchical experimental design suggested that the heterotrophic microbial community prefers high nitrogen content but low energy density substrates, while carbon content was not important. In Chapter 3, a closer look at the light-dependent dynamics of growth on a single organic substrate, glycolate, suggested that growth yields were improved by photoheterotrophy. The remaining chapters were based on the development of a genome-scale metabolic network reconstruction of the cyanobacterium Prochlorococcus to probe its metabolic capabilities and quantify metabolic fluxes. Findings described in Chapter 4 pointed to evolution of the Prochlorococcus metabolic network to optimize growth at low phosphate concentrations. Finally, in Chapter 5 and at the finest scale of complexity, a method was developed to predict hourly changes in both physiology and metabolic fluxes in Prochlorococcus by incorporating gene expression time-series data within the metabolic network model. Growth rates predicted by this method more closely matched experimental data, and diel changes in elemental composition and the energy content of biomass were predicted. Collectively, these studies identify and quantify the potential impact of variations in metabolic and physiological traits on the melee of microbial community interactions.

86. VIEW OF LIQUID NITROGEN STORAGE FACILITY LOCATED DIRECTLY WEST ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

86. VIEW OF LIQUID NITROGEN STORAGE FACILITY LOCATED DIRECTLY WEST OF THE SLC-3W FUEL APRON. NOTE HEAT EXCHANGER IN BACKGROUND. CAMERA TOWER LOCATED DIRECTLY IN FRONT OF LIQUID NITROGEN STORAGE TANK. NITROGEN AND HELIUM GAS STORAGE TANKS AT SOUTH END OF FUEL APRON IN LOWER RIGHT CORNER. - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 West, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

Flood flows, leaf breakdown, and plant-available nitrogen on a dryland river floodplain

USGS Publications Warehouse

Andersen, Douglas C.; Nelson, S. Mark; Binkley, Dan

2003-01-01

We tested the hypothesis that decomposition in flood-inundated patches of riparian tree leaf litter results in higher plant-available nitrogen in underlying, nutrient-poor alluvium. We used leafpacks (n = 56) containing cottonwood (Populus deltoides ssp. wislizenii) leaf litter to mimic natural accumulations of leaves in an experiment conducted on the Yampa River floodplain in semi-arid northwestern Colorado, USA. One-half of the leafpacks were set on the sandy alluvial surface, and one-half were buried 5 cm below the surface. The presence of NO3− and NH4+ presumed to result from a leafpack's submergence during the predictable spring flood pulse was assessed using an ion-exchange resin bag (IER) placed beneath each leafpack and at control locations. Leafpacks and IERs were collected one week after flood peak (71 days total exposure) at half the stations; the remainder were collected three weeks later (93 days exposure). A multi-peaked spring flood with above-average maximum discharge inundated leafpacks for total time periods ranging from 133 to 577 hours. Litter lost from 43 to 68 percent of its initial organic matter (OM) content. Organic matter loss increased with total time inundated and total time of exposure on the floodplain. Burial retarded OM loss if the total time inundated was relatively long, and substrate texture (sand vs. silt) affected OM loss in a complex manner through interactions with total time inundated and total time of exposure. No pulse of N attributable to leaf breakdown was detected in the IERs, and leafpack litter showed no net change in the mass of nitrogen present. Patterns of leafpack and IER nitrogen levels suggested that litter removed N from floodwater and thereby reduced N availability in underlying sediment. Immobilization of floodwater-N by litter and N mineralization outside the flood period may be important components of N flux in semi-arid and arid floodplain environments.

Reactivity of nitrido complexes of ruthenium(VI), osmium(VI), and manganese(V) bearing Schiff base and simple anionic ligands.

PubMed

Man, Wai-Lun; Lam, William W Y; Lau, Tai-Chu

2014-02-18

Nitrido complexes (M≡N) may be key intermediates in chemical and biological nitrogen fixation and serve as useful reagents for nitrogenation of organic compounds. Osmium(VI) nitrido complexes bearing 2,2':6',2″-terpyridine (terpy), 2,2'-bipyridine (bpy), or hydrotris(1-pyrazolyl)borate anion (Tp) ligands are highly electrophilic: they can react with a variety of nucleophiles to generate novel osmium(IV)/(V) complexes. This Account describes our recent results studying the reactivity of nitridocomplexes of ruthenium(VI), osmium(VI), and manganese(V) that bear Schiff bases and other simple anionic ligands. We demonstrate that these nitrido complexes exhibit rich chemical reactivity. They react with various nucleophiles, activate C-H bonds, undergo N···N coupling, catalyze the oxidation of organic compounds, and show anticancer activities. Ruthenium(VI) nitrido complexes bearing Schiff base ligands, such as [Ru(VI)(N)(salchda)(CH3OH)](+) (salchda = N,N'-bis(salicylidene)o-cyclohexyldiamine dianion), are highly electrophilic. This complex reacts readily at ambient conditions with a variety of nucleophiles at rates that are much faster than similar reactions using Os(VI)≡N. This complex also carries out unique reactions, including the direct aziridination of alkenes, C-H bond activation of alkanes and C-N bond cleavage of anilines. The addition of ligands such as pyridine can enhance the reactivity of [Ru(VI)(N)(salchda)(CH3OH)](+). Therefore researchers can tune the reactivity of Ru≡N by adding a ligand L trans to nitride: L-Ru≡N. Moreover, the addition of various nucleophiles (Nu) to Ru(VI)≡N initially generate the ruthenium(IV) imido species Ru(IV)-N(Nu), a new class of hydrogen-atom transfer (HAT) reagents. Nucleophiles also readily add to coordinated Schiff base ligands in Os(VI)≡N and Ru(VI)≡N complexes. These additions are often stereospecific, suggesting that the nitrido ligand has a directing effect on the incoming nucleophile. M≡N is also a potential platform for the design of new oxidation catalysts. For example, [Os(VI)(N)Cl4](-) catalyzes the oxidation of alkanes by a variety of oxidants, and the addition of Lewis acids greatly accelerates these reactions. [Mn(V)(N)(CN)4]2(-) is another highly efficient oxidation catalyst, which facilitates the epoxidation of alkenes and the oxidation of alcohols to carbonyl compounds using H2O2. Finally, M≡N can potentially bind to and exert various effects on biomolecules. For example, a number of Os(VI)≡N complexes exhibit novel anticancer properties, which may be related to their ability to bind to DNA or other biomolecules.

Mechanisms of nitrogen deposition effects on temperate forest lichens and trees

Treesearch

Therese S. Carter; Christopher M. Clark; Mark E. Fenn; Sarah Jovan; Steven S. Perakis; Jennifer Riddell; Paul G. Schaberg; Tara L. Greaver; Meredith G. Hastings

2017-01-01

We review the mechanisms of deleterious nitrogen (N) deposition impacts on temperate forests, with a particular focus on trees and lichens. Elevated anthropogenic N deposition to forests has varied effects on individual organisms depending on characteristics both of the N inputs (form, timing, amount) and of the organisms (ecology, physiology) involved. Improved...

USE OF GIS AND ANCILLARY VARIABLES TO PREDICT VOLATILE ORGANIC COMPOUND AND NITROGEN DIOXIDE LEVELS AT UNMONITORED LOCATIONS

EPA Science Inventory

This paper presents a GIS-based regression spatial method, known as land-use regression (LUR) modeling, to estimate ambient air pollution exposures used in the EPA El Paso Children's Health Study. Passive measurements of select volatile organic compounds (VOC) and nitrogen dioxi...

Nitrogen removal in maturation waste stabilisation ponds via biological uptake and sedimentation of dead biomass.

PubMed

Camargo Valero, M A; Mara, D D; Newton, R J

2010-01-01

In this work a set of experiments was undertaken in a pilot-scale WSP system to determine the importance of organic nitrogen sedimentation on ammonium and total nitrogen removals in maturation ponds and its seasonal variation under British weather conditions, from September 2004 to May 2007. The nitrogen content in collected sediment samples varied from 4.17% to 6.78% (dry weight) and calculated nitrogen sedimentation rates ranged from 273 to 2868 g N/ha d. High ammonium removals were observed together with high concentrations of chlorophyll-a in the pond effluent. Moreover, chlorophyll-a had a very good correlation with the corresponding increment of VSS (algal biomass) and suspended organic nitrogen (biological nitrogen uptake) in the maturation pond effluents. Therefore, when ammonium removal reached its maximum, total nitrogen removal was very poor as most of the ammonia taken up by algae was washed out in the pond effluent in the form of suspended solids. After sedimentation of the dead algal biomass, it was clear that algal-cell nitrogen was recycled from the sludge layer into the pond water column. Recycled nitrogen can either be taken up by algae or washed out in the pond effluent. Biological (mainly algal) uptake of inorganic nitrogen species and further sedimentation of dead biomass (together with its subsequent mineralization) is one of the major mechanisms controlling in-pond nitrogen recycling in maturation WSP, particularly when environmental and operational conditions are favourable for algal growth.

Ultraviolet irradiation effects incorporation of nitrate and nitrite nitrogen into aquatic natural organic matter

USGS Publications Warehouse

Thorn, Kevin A.; Cox, Larry G.

2012-01-01

One of the concerns regarding the safety and efficacy of ultraviolet radiation for treatment of drinking water and wastewater is the fate of nitrate, particularly its photolysis to nitrite. In this study, 15N NMR was used to establish for the first time that UV irradiation effects the incorporation of nitrate and nitrite nitrogen into aquatic natural organic matter (NOM). Irradiation of 15N-labeled nitrate in aqueous solution with an unfiltered medium pressure mercury lamp resulted in the incorporation of nitrogen into Suwannee River NOM (SRNOM) via nitrosation and other reactions over a range of pH from approximately 3.2 to 8.0, both in the presence and absence of bicarbonate, confirming photonitrosation of the NOM. The major forms of the incorporated label include nitrosophenol, oxime/nitro, pyridine, nitrile, and amide nitrogens. Natural organic matter also catalyzed the reduction of nitrate to ammonia on irradiation. The nitrosophenol and oxime/nitro nitrogens were found to be susceptible to photodegradation on further irradiation when nitrate was removed from the system. At pH 7.5, unfiltered irradiation resulted in the incorporation of 15N-labeled nitrite into SRNOM in the form of amide, nitrile, and pyridine nitrogen. In the presence of bicarbonate at pH 7.4, Pyrex filtered (cutoff below 290–300 nm) irradiation also effected incorporation of nitrite into SRNOM as amide nitrogen. We speculate that nitrosation of NOM from the UV irradiation of nitrate also leads to production of nitrogen gas and nitrous oxide, a process that may be termed photo-chemodenitrification. Irradiation of SRNOM alone resulted in transformation or loss of naturally abundant heterocyclic nitrogens.

Enhanced Nitrogen Loss by Eddy-Induced Vertical Transport in the Offshore Peruvian Oxygen Minimum Zone

PubMed Central

Callbeck, Cameron M.; Lavik, Gaute; Stramma, Lothar; Kuypers, Marcel M. M.; Bristow, Laura A.

2017-01-01

The eastern tropical South Pacific (ETSP) upwelling region is one of the ocean’s largest sinks of fixed nitrogen, which is lost as N2 via the anaerobic processes of anammox and denitrification. One-third of nitrogen loss occurs in productive shelf waters stimulated by organic matter export as a result of eastern boundary upwelling. Offshore, nitrogen loss rates are lower, but due to its sheer size this area accounts for ~70% of ETSP nitrogen loss. How nitrogen loss and primary production are regulated in the offshore ETSP region where coastal upwelling is less influential remains unclear. Mesoscale eddies, ubiquitous in the ETSP region, have been suggested to enhance vertical nutrient transport and thereby regulate primary productivity and hence organic matter export. Here, we investigated the impact of mesoscale eddies on anammox and denitrification activity using 15N-labelled in situ incubation experiments. Anammox was shown to be the dominant nitrogen loss process, but varied across the eddy, whereas denitrification was below detection at all stations. Anammox rates at the eddy periphery were greater than at the center. Similarly, depth-integrated chlorophyll paralleled anammox activity, increasing at the periphery relative to the eddy center; suggestive of enhanced organic matter export along the periphery supporting nitrogen loss. This can be attributed to enhanced vertical nutrient transport caused by an eddy-driven submesoscale mechanism operating at the eddy periphery. In the ETSP region, the widespread distribution of eddies and the large heterogeneity observed in anammox rates from a compilation of stations suggests that eddy-driven vertical nutrient transport may regulate offshore primary production and thereby nitrogen loss. PMID:28122044

Is the distribution of nitrogen-fixing cyanobacteria in the oceans related to temperature?

PubMed

Stal, Lucas J

2009-07-01

Approximately 50% of the global natural fixation of nitrogen occurs in the oceans supporting a considerable part of the new primary production. Virtually all nitrogen fixation in the ocean occurs in the tropics and subtropics where the surface water temperature is 25°C or higher. It is attributed almost exclusively to cyanobacteria. This is remarkable firstly because diazotrophic cyanobacteria are found in other environments irrespective of temperature and secondly because primary production in temperate and cold oceans is generally limited by nitrogen. Cyanobacteria are oxygenic phototrophic organisms that evolved a variety of strategies protecting nitrogenase from oxygen inactivation. Free-living diazotrophic cyanobacteria in the ocean are of the non-heterocystous type, namely the filamentous Trichodesmium and the unicellular groups A-C. I will argue that warm water is a prerequisite for these diazotrophic organisms because of the low-oxygen solubility and high rates of respiration allowing the organism to maintain anoxic conditions in the nitrogen-fixing cell. Heterocystous cyanobacteria are abundant in freshwater and brackish environments in all climatic zones. The heterocyst cell envelope is a tuneable gas diffusion barrier that optimizes the influx of both oxygen and nitrogen, while maintaining anoxic conditions inside the cell. It is not known why heterocystous cyanobacteria are absent from the temperate and cold oceans and seas.

15N/14N variations in Cretaceous Atlantic sedimentary sequences: implication for past changes in marine nitrogen biogeochemistry

USGS Publications Warehouse

Rau, G.H.; Arthur, M.A.; Dean, W.E.

1987-01-01

At two locations in the Atlantic Ocean (DSDP Sites 367 and 530) early to middle Cretaceous organic-carbon-rich beds ("black shales") were found to have significantly lower ??15N values (lower 15N/14N ratios) than adjacent organic-carbon-poor beds (white limestones or green claystones). While these lithologies are of marine origin, the black strata in particular have ??15N values that are significantly lower than those previously found in the marine sediment record and most contemporary marine nitrogen pools. In contrast, black, organic-carbon-rich beds at a third site (DSDP Site 603) contain predominantly terrestrial organic matter and have C- and N-isotopic compositions similar to organic matter of modern terrestrial origin. The recurring 15N depletion in the marine-derived Cretaceous sequences prove that the nitrogen they contain is the end result of an episodic and atypical biogeochemistry. Existing isotopic and other data indicate that the low 15N relative abundance is the consequence of pelagic rather than post-depositional processes. Reduced ocean circulation, increased denitrification, and, hence, reduced euphotic zone nitrate availability may have led to Cretaceous phytoplankton assemblages that were periodically dominated by N2-fixing blue-green algae, a possible source of this sediment 15N-depletion. Lack of parallel isotopic shifts in Cretaceous terrestrially-derived nitrogen (Site 603) argues that the above change in nitrogen cycling during this period did not extend beyond the marine environment. ?? 1987.

Biological Hydrogen Production: Simultaneous Saccharification and Fermentation with Nitrogen and Phosphorus Removal from Wastewater Effluent

DTIC Science & Technology

2010-07-29

bedirectly catalyzed tomonosaccharidesby cellulaseswithout requiring thermochemical pretreatment , aswould typically be required with lignocellulosic ...of a similar process with lignocellulosic biomass, although such biomass would likely require ther- mochemical pretreatment prior to enzymatic...by the automatic addition of 0.1 N NaOH . Total organic carbon (TOC), ammonia nitrogen, nitrate nitrogen, nitrite nitrogen and phosphorus analyses

Stable Isotopes of Nitrogen in Fossil Cladoceran Exoskeletons: Implications for Nitrogen Sources in the Central Baltic Sea During the Past Century

NASA Astrophysics Data System (ADS)

Struck, Ulrich; Voss, Maren; von Bodungen, Bodo; Mumm, Nicolai

The ratios of stable nitrogen isotopes were analysed in zooplankton exoskeletons extracted from dated sediment cores from the Gotland Basin of the central Baltic Sea. Combined with results on δ15N of bulk sediment, organic carbon concentrations, and abundances of exoskeletons of Bosminalongispinamaritima in the sediment, the data are used to evaluate significant sources of nitrogen in the food web over the past century. Nitrogen isotopic composition of bulk sediments ranges from 2.5 to 4.5ö, that of exokeletons varies between 0.4 and 6.2ö. The two are positively correlated. A marked increase in the abundance of Bosmina since 1965 (from less than 500 specimen to more than 5000 specimencm3 of sediment) is correlated with a significant increase in sedimentary organic carbon concentrations (from 4% to more than 10%). The isotopic data do not identify increased land-derived nitrate as the dominant nitrogen source fuelling the increase. Instead, we postulate that nitrogen fixation by diazotrophic bacteria has been one of the larger sources of nitrogen in the Baltic Sea, as it is today.

Structural aspects of catalytic mechanisms of endonucleases and their binding to nucleic acids

NASA Astrophysics Data System (ADS)

Zhukhlistova, N. E.; Balaev, V. V.; Lyashenko, A. V.; Lashkov, A. A.

2012-05-01

Endonucleases (EC 3.1) are enzymes of the hydrolase class that catalyze the hydrolytic cleavage of deoxyribonucleic and ribonucleic acids at any region of the polynucleotide chain. Endonucleases are widely used both in biotechnological processes and in veterinary medicine as antiviral agents. Medical applications of endonucleases in human cancer therapy hold promise. The results of X-ray diffraction studies of the spatial organization of endonucleases and their complexes and the mechanism of their action are analyzed and generalized. An analysis of the structural studies of this class of enzymes showed that the specific binding of enzymes to nucleic acids is characterized by interactions with nitrogen bases and the nucleotide backbone, whereas the nonspecific binding of enzymes is generally characterized by interactions only with the nucleic-acid backbone. It should be taken into account that the specificity can be modulated by metal ions and certain low-molecular-weight organic compounds. To test the hypotheses about specific and nonspecific nucleic-acid-binding proteins, it is necessary to perform additional studies of atomic-resolution three-dimensional structures of enzyme-nucleic-acid complexes by methods of structural biology.

Nitrogen availability is a primary determinant of conifer mycorrhizas across complex environmental gradients

Treesearch

Filipa Cox; Nadia Barsoum; Erik A. Lilleskov; Martin I. Bidartondo

2010-01-01

Global environmental change has serious implications for functional biodiversity in temperate and boreal forests. Trees depend on mycorrhizal fungi for nutrient uptake, but predicted increases in nitrogen availability may alter fungal communities. To address a knowledge gap regarding the effects of nitrogen availability on mycorrhizal communities at large scales, we...

Efficient Isoprene Secondary Organic Aerosol Formation from a Non-IEPOX Pathway

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Jiumeng; D’Ambro, Emma L.; Lee, Ben H.

2016-09-20

With a large global emission rate and high reactivity, isoprene has a profound effect upon atmospheric chemistry and composition. The atmospheric pathways by which isoprene converts to secondary organic aerosol (SOA) and how anthropogenic pollutants such as nitrogen oxides and sulfur affect this process are a subject of intense research because particles affect Earth’s climate and local air quality. In the absence of both nitrogen oxides and reactive aqueous seed particles, we measure SOA mass yields from isoprene photochemical oxidation of up to 15%, which are factors of 2, or more, higher than those typically used in coupled chemistry-climate models.more » SOA yield is initially constant with the addition of increasing amounts of nitric oxide (NO) but then sharply decreases for input concentrations above 10 ppbv. Online measurements of aerosol molecular composition show that the fate of second-generation RO2 radicals is key to understanding the efficient SOA formation and the NOx dependent yields described here and in the literature. These insights allow for improved quantitative estimates of SOA formation in the pre-industrial atmosphere and in biogenic-rich regions with limited anthropogenic impacts and suggest a more complex representation of NOx dependent SOA yields may be important in models.« less

Nitrogen fixation and hydrogen metabolism in cyanobacteria.

PubMed

Bothe, Hermann; Schmitz, Oliver; Yates, M Geoffrey; Newton, William E

2010-12-01

This review summarizes recent aspects of (di)nitrogen fixation and (di)hydrogen metabolism, with emphasis on cyanobacteria. These organisms possess several types of the enzyme complexes catalyzing N(2) fixation and/or H(2) formation or oxidation, namely, two Mo nitrogenases, a V nitrogenase, and two hydrogenases. The two cyanobacterial Ni hydrogenases are differentiated as either uptake or bidirectional hydrogenases. The different forms of both the nitrogenases and hydrogenases are encoded by different sets of genes, and their organization on the chromosome can vary from one cyanobacterium to another. Factors regulating the expression of these genes are emerging from recent studies. New ideas on the potential physiological and ecological roles of nitrogenases and hydrogenases are presented. There is a renewed interest in exploiting cyanobacteria in solar energy conversion programs to generate H(2) as a source of combustible energy. To enhance the rates of H(2) production, the emphasis perhaps needs not to be on more efficient hydrogenases and nitrogenases or on the transfer of foreign enzymes into cyanobacteria. A likely better strategy is to exploit the use of radiant solar energy by the photosynthetic electron transport system to enhance the rates of H(2) formation and so improve the chances of utilizing cyanobacteria as a source for the generation of clean energy.

Spatio-temporal variability of dissolved organic nitrogen (DON), carbon (DOC), and nutrients in the Nile River, Egypt.

PubMed

Badr, El-Sayed A

2016-10-01

Increases in human activity have resulted in enhanced anthropogenic inputs of nitrogen (N) and carbon (C) into the Nile River. The Damietta Branch of the Nile is subject to inputs from industrial, agricultural, and domestic wastewater. This study investigated the distribution and seasonality of dissolved organic nitrogen (DON), dissolved organic carbon (DOC), and nutrients in the Nile Damietta Branch. Water samples were collected from 24 sites between May 2009 and February 2010. Dissolved organic nitrogen concentrations averaged 251 ± 115 μg/l, with a range of 90.2-671 μg/l, and contributed 40.8 ± 17.7 % to the total dissolved nitrogen (TDN) pool. Relative to autumn and winter, DON was a larger fraction of the TDN pool during spring and summer indicating the influence of bacterioplankton on the nitrogen cycle. Concentrations of DOC ranged from 2.23 to 11.3 mg/l with an average of 5.15 ± 2.36 mg/l, reflecting a high organic matter load from anthropogenic sources within the study area, and were highest during autumn. Higher values of biochemical oxygen demand (BOD), chemical oxygen demand (COD), DON, nitrate, and phosphate occurred downstream of the Damietta Branch and were probably due to anthropogenic inputs to the Nile from the Damietta district. A bacterial incubation experiment indicated that 52.1-95.0 % of DON was utilized by bacteria within 21 days. The decrease in DON concentration was accompanied by an increase in nitrate concentration of 54.8-87.3 %, presumably through DON mineralization. Based on these results, we recommend that water quality assessments consider DON and DOC, as their omission may result in an underestimation of the total organic matter load and impact.

Preferences for different nitrogen forms by coexisting plant species and soil microbes.

PubMed

Harrison, Kathryn A; Bol, Roland; Bardgett, Richard D

2007-04-01

The growing awareness that plants might use a variety of nitrogen (N) forms, both organic and inorganic, has raised questions about the role of resource partitioning in plant communities. It has been proposed that coexisting plant species might be able to partition a limited N pool, thereby avoiding competition for resources, through the uptake of different chemical forms of N. In this study, we used in situ stable isotope labeling techniques to assess whether coexisting plant species of a temperate grassland (England, UK) display preferences for different chemical forms of N, including inorganic N and a range of amino acids of varying complexity. We also tested whether plants and soil microbes differ in their preference for different N forms, thereby relaxing competition for this limiting resource. We examined preferential uptake of a range of 13C15N-labeled amino acids (glycine, serine, and phenylalanine) and 15N-labeled inorganic N by coexisting grass species and soil microbes in the field. Our data show that while coexisting plant species simultaneously take up a variety of N forms, including inorganic N and amino acids, they all showed a preference for inorganic N over organic N and for simple over the more complex amino acids. Soil microbes outcompeted plants for added N after 50 hours, but in the long-term (33 days) the proportion of added 15N contained in the plant pool increased for all N forms except for phenylalanine, while the proportion in the microbial biomass declined relative to the first harvest. These findings suggest that in the longer-term plants become more effective competitors for added 15N. This might be due to microbial turnover releasing 15N back into the plant-soil system or to the mineralization and subsequent plant uptake of 15N transferred initially to the organic matter pool. We found no evidence that soil microbes preferentially utilize any of the N forms added, despite previous studies showing that microbial preferences for N forms vary over time. Our data suggest that coexisting plants can outcompete microbes for a variety of N forms, but that such plant species show similar preferences for inorganic over organic N.

Carbon and nitrogen stoichiometry across stream ecosystems

NASA Astrophysics Data System (ADS)

Wymore, A.; Kaushal, S.; McDowell, W. H.; Kortelainen, P.; Bernhardt, E. S.; Johnes, P.; Dodds, W. K.; Johnson, S.; Brookshire, J.; Spencer, R.; Rodriguez-Cardona, B.; Helton, A. M.; Barnes, R.; Argerich, A.; Haq, S.; Sullivan, P. L.; López-Lloreda, C.; Coble, A. A.; Daley, M.

2017-12-01

Anthropogenic activities are altering carbon and nitrogen concentrations in surface waters globally. The stoichiometry of carbon and nitrogen regulates important watershed biogeochemical cycles; however, controls on carbon and nitrogen ratios in aquatic environments are poorly understood. Here we use a multi-biome and global dataset (tropics to Arctic) of stream water chemistry to assess relationships between dissolved organic carbon (DOC) and nitrate, ammonium and dissolved organic nitrogen (DON), providing a new conceptual framework to consider interactions between DOC and the multiple forms of dissolved nitrogen. We found that across streams the total dissolved nitrogen (TDN) pool is comprised of very little ammonium and as DOC concentrations increase the TDN pool shifts from nitrate to DON dominated. This suggests that in high DOC systems, DON serves as the primary source of nitrogen. At the global scale, DOC and DON are positively correlated (r2 = 0.67) and the average C: N ratio of dissolved organic matter (molar ratio of DOC: DON) across our data set is approximately 31. At the biome and smaller regional scale the relationship between DOC and DON is highly variable (r2 = 0.07 - 0.56) with the strongest relationships found in streams draining the mixed temperate forests of the northeastern United States. DOC: DON relationships also display spatial and temporal variability including latitudinal and seasonal trends, and interactions with land-use. DOC: DON ratios correlated positively with gradients of energy versus nutrient limitation pointing to the ecological role (energy source versus nutrient source) that DON plays with stream ecosystems. Contrary to previous findings we found consistently weak relationships between DON and nitrate which may reflect DON's duality as an energy or nutrient source. Collectively these analyses demonstrate how gradients of DOC drive compositional changes in the TDN pool and reveal a high degree of variability in the C: N ratio (3-100) of stream water dissolved organic matter.

[Effects of nitrogen deposition on the concentration and spectral characteristics of dissolved organic matter in soil solution in a young Cunninghamia lanceolata plantation.

PubMed

Yuan, Xiao Chun; Chen, Yue Min; Yuan, Shuo; Zheng, Wei; Si, You Tao; Yuan, Zhi Peng; Lin, Wei Sheng; Yang, Yu Sheng

2017-01-01

To study the effects of nitrogen deposition on the concentration and spectral characteristics of dissolved organic matter (DOM) in the forest soil solution from the subtropical Cunninghamia lanceolata plantation, using negative pressure sampling method, the dynamics of DOM in soil solutions from 0-15 and 15-30 cm soil layer was monitored for two years and the spectroscopic features of DOM were analyzed. The results showed that nitrogen deposition significantly reduced the concentration of dissolved organic carbon (DOC), and increased the aromatic index (AI) and the humic index (HIX), but had no significant effect on dissolved organic nitrogen (DON) concentration in both soil layers. There was obvious seasonal variation in DOM concentration of the soil solution, which was prominently higher in summer and autumn than in spring and winter.Fourier-transform infrared (FTIR) absorption spectrometry indicated that the DOM in forest soil solution had absorption peaks in the similar position of six regions, being the highest in wave number of 1145-1149 cm -1 . Three-dimensional fluorescence spectra indicated that DOM was mainly consisted of protein-like substances (Ex/Em=230 nm/300 nm) and microbial degradation products (Ex/Em=275 nm/300 nm). The availability of protein-like substances from 0-15 cm soil layer was reduced in the nitrogen treatments. Nitrogen deposition significantly reduced the concentration of DOC in soil solution, maybe largely by reducing soil pH, inhibiting soil carbon mineralization and stimulating plant growth. In particular, the decline of DOC concentration in the surface layer was due to the production inhibition of the protein-like substances and carboxylic acids. Short-term nitrogen deposition might be beneficial to the maintenance of soil fertility, while the long-term accumulation of nitrogen deposition might lead to the hard utilization of soil nutrients.

Effects of nitrogen fertilizer application on greenhouse gas emissions and economics of corn production.

PubMed

Kim, Seungdo; Dale, Bruce E

2008-08-15

Nitrogen fertilizer plays an important role in corn cultivation in terms of both economic and environmental aspects. Nitrogen fertilizer positively affects corn yield and the soil organic carbon level, but it also has negative environmental effects through nitrogen-related emissions from soil (e.g., N20, NOx, NO3(-) leaching, etc.). Effects of nitrogen fertilizer on greenhouse gas emissions associated with corn grain are investigated via life cycle assessment. Ecoefficiency analysis is also used to determine an economically and environmentally optimal nitrogen application rate (NAR). The ecoefficiency index in this study is defined as the ratio of economic return due to nitrogen fertilizer to the greenhouse gas emissions of corn cultivation. Greenhouse gas emissions associated with corn grain decrease as NAR increases at a lower NAR until a minimum greenhouse gas emission level is reached because corn yield and soil organic carbon level increase with NAR. Further increasing NAR after a minimum greenhouse gas emission level raises greenhouse gas emissions associated with corn grain. Increased greenhouse gas emissions of corn grain due to nitrous oxide emissions from soil are much higher than reductions of greenhouse gas emissions of corn grain due to corn yield and changes in soil organic carbon levels at a higher NAR. Thus, there exists an environmentally optimal NAR in terms of greenhouse gas emissions. The trends of the ecoefficiency index are similar to those of economic return to nitrogen and greenhouse gas emissions associated with corn grain. Therefore, an appropriate NAR could enhance profitability as well as reduce greenhouse gas emissions associated with corn grain.

OXIDATION AND DEVOLATILIZATION OF NITROGEN IN COAL CHAR

EPA Science Inventory

The reactions of organically-bound nitrogen in coal char during combustion have been studied in a laboratory furnace using size-graded char particles prepared by the pyrolysis of a Montana lignite. The time-resolved variations of nitrogen-to-carbon ratio during char oxidation hav...

Method 440.0 Determination of Carbon and Nitrogen in Sediments and Particulatesof Estuarine/Coastal Waters Using Elemental Analysis

EPA Science Inventory

Elemental analysis is used to determine particulate carbon (PC) and particulate nitrogen (PN) in estuarine and coastal waters and sediment. The method measures the total carbon and nitrogen irrespective of source (inorganic or organic).

Decoupling of soil carbon and nitrogen turnover partly explains increased net ecosystem production in response to nitrogen fertilization

NASA Astrophysics Data System (ADS)

Ehtesham, Emad; Bengtson, Per

2017-04-01

During the last decade there has been an ongoing controversy regarding the extent to which nitrogen fertilization can increase carbon sequestration and net ecosystem production in forest ecosystems. The debate is complicated by the fact that increased nitrogen availability caused by nitrogen deposition has coincided with increasing atmospheric carbon dioxide concentrations. The latter could further stimulate primary production but also result in increased allocation of carbon to root exudates, which could potentially ‘prime’ the decomposition of soil organic matter. Here we show that increased input of labile carbon to forest soil caused a decoupling of soil carbon and nitrogen cycling, which was manifested as a reduction in respiration of soil organic matter that coincided with a substantial increase in gross nitrogen mineralization. An estimate of the magnitude of the effect demonstrates that the decoupling could potentially result in an increase in net ecosystem production by up to 51 kg C ha-1 day-1 in nitrogen fertilized stands during peak summer. Even if the effect is several times lower on an annual basis, the results still suggest that nitrogen fertilization can have a much stronger influence on net ecosystem production than can be expected from a direct stimulation of primary production alone.

Competition of hydrogen bonds and halogen bonds in complexes of hypohalous acids with nitrogenated bases.

PubMed

Alkorta, Ibon; Blanco, Fernando; Solimannejad, Mohammad; Elguero, Jose

2008-10-30

A theoretical study of the complexes formed by hypohalous acids (HOX, X = F, Cl, Br, I, and At) with three nitrogenated bases (NH 3, N 2, and NCH) has been carried out by means of ab initio methods, up to MP2/aug-cc-pVTZ computational method. In general, two minima complexes are found, one with an OH...N hydrogen bond and the other one with a X...N halogen bond. While the first one is more stable for the smallest halogen derivatives, the two complexes present similar stabilities for the iodine case and the halogen-bonded structure is the most stable one for the hypoastatous acid complexes.

Nitrogen-Based Diazeniumdiolates: Versatile Nitric Oxide-Releasing Compounds for Biomedical Research and Potential Clinical Applications

NASA Astrophysics Data System (ADS)

Saavedra, Joseph E.; Keefer, Larry K.

2002-12-01

Nitric oxide-generating ions of the nitrogen-diazeniumdiolate class with the general structure R1R2N-[N(O)NO]1 have been prepared by exposing primary, secondary, and polyamines to nitric oxide (NO). The resulting complexes regenerate bioactive NO at physiological pH with half-lives ranging from 2 seconds to 20 hours. An important goal in our research is to deliver NO to a specific organ or cell type where it is needed without affecting other NO-sensitive parts of the anatomy. By taking advantage of the remarkable chemical versatility of diazeniumdiolates, we have developed general strategies to prepare either tissue-selective NO donor drugs or materials containing NO delivery agents that can be physically placed near the target sites. Inhibition of blood coagulation, induction of penile erection, relief of pulmonary hypertension, and reversal of cerebral vasospasm are a few examples of their potential clinical applications.

See Featured Molecules.

Hydroperoxides as Hydrogen Bond Donors

NASA Astrophysics Data System (ADS)

Møller, Kristian H.; Tram, Camilla M.; Hansen, Anne S.; Kjaergaard, Henrik G.

2016-06-01

Hydroperoxides are formed in the atmosphere following autooxidation of a wide variety of volatile organics emitted from both natural and anthropogenic sources. This raises the question of whether they can form hydrogen bonds that facilitate aerosol formation and growth. Using a combination of Fourier transform infrared spectroscopy, FT-IR, and ab initio calculations, we have compared the gas phase hydrogen bonding ability of tert-butylhydroperoxide (tBuOOH) to that of tert-butanol (tBuOH) for a series of bimolecular complexes with different acceptors. The hydrogen bond acceptor atoms studied are nitrogen, oxygen, phosphorus and sulphur. Both in terms of calculated redshifts and binding energies (BE), our results suggest that hydroperoxides are better hydrogen bond donors than the corresponding alcohols. In terms of hydrogen bond acceptor ability, we find that nitrogen is a significantly better acceptor than the other three atoms, which are of similar strength. We observe a similar trend in hydrogen bond acceptor ability with other hydrogen bond donors including methanol and dimethylamine.

Metabolism in Fungal Pathogenesis

PubMed Central

Ene, Iuliana V.; Brunke, Sascha; Brown, Alistair J.P.; Hube, Bernhard

2014-01-01

Fungal pathogens must assimilate local nutrients to establish an infection in their mammalian host. We focus on carbon, nitrogen, and micronutrient assimilation mechanisms, discussing how these influence host–fungus interactions during infection. We highlight several emerging trends based on the available data. First, the perturbation of carbon, nitrogen, or micronutrient assimilation attenuates fungal pathogenicity. Second, the contrasting evolutionary pressures exerted on facultative versus obligatory pathogens have led to contemporary pathogenic fungal species that display differing degrees of metabolic flexibility. The evolutionarily ancient metabolic pathways are conserved in most fungal pathogen, but interesting gaps exist in some species (e.g., Candida glabrata). Third, metabolic flexibility is generally essential for fungal pathogenicity, and in particular, for the adaptation to contrasting host microenvironments such as the gastrointestinal tract, mucosal surfaces, bloodstream, and internal organs. Fourth, this metabolic flexibility relies on complex regulatory networks, some of which are conserved across lineages, whereas others have undergone significant evolutionary rewiring. Fifth, metabolic adaptation affects fungal susceptibility to antifungal drugs and also presents exciting opportunities for the development of novel therapies. PMID:25190251

Monitoring requirements for groundwaters under the influence of reclaimed water.

PubMed

Fox, P

2001-07-01

Monitoring groundwaters under the influence of reclaimed water must consider the major constituents of concern in reclaimed water. This research focused on the fate of dissolved organic carbon and nitrogen species at field sites located throughout the Southwestern United States. A watershed approach was developed to predict the fate of dissolved organic carbon as a function of the drinking water dissolved organic carbon concentration and the total dissolved solids concentration in the reclaimed water. Extensive characterization of the dissolved organic carbon recovered from groundwaters under the influence of reclaimed water was done. With the exception of fluorescence spectroscopy, the dissolved organic carbon present in effluent organic matter was similar in structure, character and reactivity as compared to natural organic matter. Evidence for sustainable nitrogen removal mechanisms during groundwater recharge with reclaimed water was obtained. The autotrophic reaction between ammonia and nitrate appears to a mechanism for the removal nitrogen in a carbon-depleted environment. The monitoring tools and methodologies developed in this research can be used to assure protection of public health and determine the sustainability of indirect potable reuse projects.

Dissolved organic nitrogen in urban streams: Biodegradability and molecular composition studies.

PubMed

Lusk, Mary G; Toor, Gurpal S

2016-06-01

A portion of the dissolved organic nitrogen (DON) is biodegradable in water bodies, yet our knowledge of the molecular composition and controls on biological reactivity of DON is limited. Our objective was to investigate the biodegradability and molecular composition of DON in streams that drain a gradient of 19-83% urban land use. Weekly sampling over 21 weeks suggested no significant relationship between urban land use and DON concentration. We then selected two streams that drain 28% and 83% urban land use to determine the biodegradability and molecular composition of the DON by coupling 5-day bioassay experiments with high resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). Both urban streams contained a wide range of N-bearing biomolecular formulas and had >80% DON in lignin-like compounds, with only 5-7% labile DON. The labile DON consisted mostly of lipid-and protein-like structures with high H/C and low O/C values. Comparison of reactive formulas and formed counterparts during the bioassay experiments indicated a shift toward more oxygenated and less saturated N-bearing DON formulas due to the microbial degradation. Although there was a little net removal (5-7%) of organic-bound N over the 5-day bioassay, there was some change to the carbon skeleton of DON compounds. These results suggest that DON in urban streams contains a complex mixture of compounds such as lipids, proteins, and lignins of variable chemical structures and biodegradability. Copyright © 2016 Elsevier Ltd. All rights reserved.

Simulated nitrogen deposition affects wood decomposition by cord-forming fungi.

PubMed

Bebber, Daniel P; Watkinson, Sarah C; Boddy, Lynne; Darrah, Peter R

2011-12-01

Anthropogenic nitrogen (N) deposition affects many natural processes, including forest litter decomposition. Saprotrophic fungi are the only organisms capable of completely decomposing lignocellulosic (woody) litter in temperate ecosystems, and therefore the responses of fungi to N deposition are critical in understanding the effects of global change on the forest carbon cycle. Plant litter decomposition under elevated N has been intensively studied, with varying results. The complexity of forest floor biota and variability in litter quality have obscured N-elevation effects on decomposers. Field experiments often utilize standardized substrates and N-levels, but few studies have controlled the decay organisms. Decomposition of beech (Fagus sylvatica) blocks inoculated with two cord-forming basidiomycete fungi, Hypholoma fasciculare and Phanerochaete velutina, was compared experimentally under realistic levels of simulated N deposition at Wytham Wood, Oxfordshire, UK. Mass loss was greater with P. velutina than with H. fasciculare, and with N treatment than in the control. Decomposition was accompanied by growth of the fungal mycelium and increasing N concentration in the remaining wood. We attribute the N effect on wood decay to the response of cord-forming wood decay fungi to N availability. Previous studies demonstrated the capacity of these fungi to scavenge and import N to decaying wood via a translocating network of mycelium. This study shows that small increases in N availability can increase wood decomposition by these organisms. Dead wood is an important carbon store and habitat. The responses of wood decomposers to anthropogenic N deposition should be considered in models of forest carbon dynamics.

Carbon and nitrogen isotopic compositions of particulate organic matter in four large river systems across the United States

USGS Publications Warehouse

Kendall, C.; Silva, S.R.; Kelly, V.J.

2001-01-01

Riverine particulate organic matter (POM) samples were collected bi-weekly to monthly from 40 sites in the Mississippi, Colorado, Rio Grande, and Columbia River Basins (USA) in 1996-97 and analysed for carbon and nitrogen stable isotopic compositions. These isotopic compositions and C : N ratios were used to identify four endmember sources of POM: Plankton, fresh terrestrial plant material, aquatic plants, and soil organic material. This large-scale study also incorporated ancillary chemical and hydrologic data to refine and extend the interpretations of POM sources beyond the source characterizations that could be done solely with isotopic and elemental ratios. The ancillary data were especially useful for differentiating between seasonal changes in POM source materials and the effects of local nutrient sources and in-stream biogeochemical processes. Average values of ??13 C and C : N for all four river systems suggested that plankton is the dominant source of POM in these rivers, with higher percentages of plankton downstream of reservoirs. Although the temporal patterns in some rivers are complex, the low ??13C and C : N values in spring and summer probably indicate plankton blooms, whereas relatively elevated values in fall and winter are consistent with greater proportions of decaying aquatic vegetation and/or terrestrial material. Seasonal shifts in the ??13C of POM when the C : N remains relatively constant probably indicate changes in the relative rates of photosynthesis and respiration. Periodic inputs of plant detritus are suggested by C : N ratios >15, principally on the Columbia and Ohio Rivers. The ??15N and ??13C also reflect the importance of internal and external sources of dissolved carbon and nitrogen, and the degree of in-stream processing. Elevated ??15N values at some sites probably reflect inputs from sewage and/or animal waste. This information on the spatial and temporal variation in sources of POM in four major river systems should prove useful in future food web and nutrient transport studies.

Oceanic nitrogen cycling and N2O flux perturbations in the Anthropocene

NASA Astrophysics Data System (ADS)

Landolfi, A.; Somes, C. J.; Koeve, W.; Zamora, L. M.; Oschlies, A.

2017-08-01

There is currently no consensus on how humans are affecting the marine nitrogen (N) cycle, which limits marine biological production and CO2 uptake. Anthropogenic changes in ocean warming, deoxygenation, and atmospheric N deposition can all individually affect the marine N cycle and the oceanic production of the greenhouse gas nitrous oxide (N2O). However, the combined effect of these perturbations on marine N cycling, ocean productivity, and marine N2O production is poorly understood. Here we use an Earth system model of intermediate complexity to investigate the combined effects of estimated 21st century CO2 atmospheric forcing and atmospheric N deposition. Our simulations suggest that anthropogenic perturbations cause only a small imbalance to the N cycle relative to preindustrial conditions (˜+5 Tg N y-1 in 2100). More N loss from water column denitrification in expanded oxygen minimum zones (OMZs) is counteracted by less benthic denitrification, due to the stratification-induced reduction in organic matter export. The larger atmospheric N load is offset by reduced N inputs by marine N2 fixation. Our model predicts a decline in oceanic N2O emissions by 2100. This is induced by the decrease in organic matter export and associated N2O production and by the anthropogenically driven changes in ocean circulation and atmospheric N2O concentrations. After comprehensively accounting for a series of complex physical-biogeochemical interactions, this study suggests that N flux imbalances are limited by biogeochemical feedbacks that help stabilize the marine N inventory against anthropogenic changes. These findings support the hypothesis that strong negative feedbacks regulate the marine N inventory on centennial time scales.

Calibration of a simple and a complex model of global marine biogeochemistry

NASA Astrophysics Data System (ADS)

Kriest, Iris

2017-11-01

The assessment of the ocean biota's role in climate change is often carried out with global biogeochemical ocean models that contain many components and involve a high level of parametric uncertainty. Because many data that relate to tracers included in a model are only sparsely observed, assessment of model skill is often restricted to tracers that can be easily measured and assembled. Examination of the models' fit to climatologies of inorganic tracers, after the models have been spun up to steady state, is a common but computationally expensive procedure to assess model performance and reliability. Using new tools that have become available for global model assessment and calibration in steady state, this paper examines two different model types - a complex seven-component model (MOPS) and a very simple four-component model (RetroMOPS) - for their fit to dissolved quantities. Before comparing the models, a subset of their biogeochemical parameters has been optimised against annual-mean nutrients and oxygen. Both model types fit the observations almost equally well. The simple model contains only two nutrients: oxygen and dissolved organic phosphorus (DOP). Its misfit and large-scale tracer distributions are sensitive to the parameterisation of DOP production and decay. The spatio-temporal decoupling of nitrogen and oxygen, and processes involved in their uptake and release, renders oxygen and nitrate valuable tracers for model calibration. In addition, the non-conservative nature of these tracers (with respect to their upper boundary condition) introduces the global bias (fixed nitrogen and oxygen inventory) as a useful additional constraint on model parameters. Dissolved organic phosphorus at the surface behaves antagonistically to phosphate, and suggests that observations of this tracer - although difficult to measure - may be an important asset for model calibration.

Regulation of Manganese Antioxidants by Nutrient Sensing Pathways in Saccharomyces cerevisiae

PubMed Central

Reddi, Amit R.; Culotta, Valeria C.

2011-01-01

In aerobic organisms, protection from oxidative damage involves the combined action of enzymatic and nonproteinaceous cellular factors that collectively remove harmful reactive oxygen species. One class of nonproteinaceous antioxidants includes small molecule complexes of manganese (Mn) that can scavenge superoxide anion radicals and provide a backup for superoxide dismutase enzymes. Such Mn antioxidants have been identified in diverse organisms; however, nothing regarding their physiology in the context of cellular adaptation to stress was known. Using a molecular genetic approach in Bakers’ yeast, Saccharomyces cerevisiae, we report that the Mn antioxidants can fall under control of the same pathways used for nutrient sensing and stress responses. Specifically, a serine/threonine PAS-kinase, Rim15p, that is known to integrate phosphate, nitrogen, and carbon sensing, can also control Mn antioxidant activity in yeast. Rim15p is negatively regulated by the phosphate-sensing kinase complex Pho80p/Pho85p and by the nitrogen-sensing Akt/S6 kinase homolog, Sch9p. We observed that loss of either of these upstream kinase sensors dramatically inhibited the potency of Mn as an antioxidant. Downstream of Rim15p are transcription factors Gis1p and the redundant Msn2/Msn4p pair that typically respond to nutrient and stress signals. Both transcription factors were found to modulate the potency of the Mn antioxidant but in opposing fashions: loss of Gis1p was seen to enhance Mn antioxidant activity whereas loss of Msn2/4p greatly suppressed it. Our observed roles for nutrient and stress response kinases and transcription factors in regulating the Mn antioxidant underscore its physiological importance in aerobic fitness. PMID:21926297

Characteristics of Nitrogen Balances of Large-scale Stock Farms and Reduction of Environmental Nitrogen Loads

NASA Astrophysics Data System (ADS)

Hattori, Toshihiro; Takamatsu, Rieko

We calculated nitrogen balances on farm gate and soil surface on large-scale stock farms and discussed methods for reducing environmental nitrogen loads. Four different types of public stock farms (organic beef, calf supply and daily cows) were surveyed in Aomori Prefecture. (1) Farm gate and soil surface nitrogen inflows were both larger than the respective outflows on all types of farms. Farm gate nitrogen balance for beef farms were worse than that for dairy farms. (2) Soil surface nitrogen outflows and soil nitrogen retention were in proportion to soil surface nitrogen inflows. (3) Reductions in soil surface nitrogen retention were influenced by soil surface nitrogen inflows. (4) In order to reduce farm gate nitrogen retention, inflows of formula feed and chemical fertilizer need to be reduced. (5) In order to reduce soil surface nitrogen retention, inflows of fertilizer need to be reduced and nitrogen balance needs to be controlled.

[Research advances on regulating soil nitrogen loss by the type of nitrogen fertilizer and its application strategy.

PubMed

Zhou, Wei; Lyu, Teng Fei; Yang, Zhi Ping; Sun, Hong; Yang, Liang Jie; Chen, Yong; Ren, Wan Jun

2016-09-01

Unreasonable application of nitrogen fertilizer to cropland decreases nitrogen use efficiency of crop. A large amount of nitrogen loss to environment through runoff, leaching, ammonia volati-lization, nitrification-denitrification, etc., causes water and atmospheric pollution, poses serious environmental problems and threatens human health. The type of nitrogen fertilizer and its application rate, time, and method have significant effects on nitrogen loss. The primary reason for nitrogen loss is attributed to the supersaturated soil nitrogen concentration. Making full use of environmental nitrogen sources, reducing the application rate of chemical nitrogen fertilizers, applying deep placement fertilizing method, and applying organic fertilizers with chemical nitrogen fertilizers, are effective practices for reducing nitrogen loss and improving nitrogen use efficiency. It is suggested that deve-loping new high efficiency nitrogen fertilizers, enhancing nitrogen management, and strengthening the monitoring and use of environmental nitrogen sources are the powerful tools to decrease nitrogen application rate and increase efficiency of cropland.

Cyanotrophic and arsenic oxidizing activities of Pseudomonas mendocina P6115 isolated from mine tailings containing high cyanide concentration.

PubMed

Miranda-Carrazco, Alejandra; Vigueras-Cortés, Juan M; Villa-Tanaca, Lourdes; Hernández-Rodríguez, César

2018-04-11

Mine tailings and wastewater generate man-made environments with several selective pressures, including the presence of heavy metals, arsenic and high cyanide concentrations, but severe nutritional limitations. Some oligotrophic and pioneer bacteria can colonise and grow in mine wastes containing a low concentration of organic matter and combined nitrogen sources. In this study, Pseudomonas mendocina P6115 was isolated from mine tailings in Durango, Mexico, and identified through a phylogenetic approach of 16S rRNA, gyrB, rpoB, and rpoD genes. Cell growth, cyanide consumption, and ammonia production kinetics in a medium with cyanide as sole nitrogen source showed that at the beginning, the strain grew assimilating cyanide, when cyanide was removed, ammonium was produced and accumulated in the culture medium. However, no clear stoichiometric relationship between both nitrogen sources was observed. Also, cyanide complexes were assimilated as nitrogen sources. Other phenotypic tasks that contribute to the strain's adaptation to a mine tailing environment included siderophores production in media with moderate amounts of heavy metals, arsenite and arsenate tolerance, and the capacity of oxidizing arsenite. P. mendocina P6115 harbours cioA/cioB and aoxB genes encoding for a cyanide-insensitive oxidase and an arsenite oxidase, respectively. This is the first report where P. mendocina is described as a cyanotrophic and arsenic oxidizing species. Genotypic and phenotypic tasks of P. mendocina P6115 autochthonous from mine wastes are potentially relevant for biological treatment of residues contaminated with cyanide and arsenic.

Comparison of Nitrogen Incorporation in Tholins Produced by FUV Irradiation and Spark Discharge

NASA Technical Reports Server (NTRS)

Horst, S. M.; DeWitt, H. L.; Trainer, M. G.; Tolbert, M. A.

2012-01-01

The discovery of very heavy ions (Coates et al., 2007) in Titan's thermosphere has dramatically altered our understanding of the processes involved in the formation of the complex organic aerosols that comprise Titan's characteristic haze. Before Cassini's arrival, it was believed that aerosol production began in the stratosphere where the chemical processes were predominantly initiated by FUV radiation. This understanding guided the design of Titan atmosphere simulation experiments. However, the energy environment of the thermosphere is significantly different than the stratosphere; in particular there is a greater flux of EUV photons and energetic particles available to initiate chemical reactions, including the destruction of N2. in the upper atmosphere. Using a High Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS), we have obtained in situ composition measurements of aerosol particles (so'called "tholins") produced in CH4/N2 gas mixtures subjected to either FUV radiation (deuterium lamp, 115-400 nm) (Trainer et al., 2012) or a spark discharge. A comparison of the composition of tholins produced using the two different energy sources will be presented, in particular with regard to the variation in nitrogen content of the two types of tholin. Titan's aerosols are known to contain significant amounts of nitrogen (Israel et al., 2005) and therefore understanding the role of nitrogen in the aerosol chemistry is important to further our knowledge of the formation and evolution of aerosols in Titan's atmosphere.

Stoichiometric evaluation of partial nitritation, anammox and denitrification processes in a sequencing batch reactor and interpretation of online monitoring parameters.

PubMed

Langone, Michela; Ferrentino, Roberta; Cadonna, Maria; Andreottola, Gianni

2016-12-01

A laboratory-scale sequencing batch reactor (SBR) performing partial nitritation - anammox and denitrification was used to treat anaerobic digester effluents. The SBR cycle consisted of a short mixing filling phase followed by oxic and anoxic reaction phases. Working at 25 °C, an ammonium conversion efficiency of 96.5%, a total nitrogen removal efficiency of 88.6%, and an organic carbon removal efficiency of 63.5% were obtained at a nitrogen loading rate of 0.15 kg N m -3 d -1 , and a biodegradable organic carbon to nitrogen ratio of 0.37. The potential contribution of each biological process was evaluated by using a stoichiometric model. The nitritation contribution decreased as the temperature decreased, while the contribution from anammox depended on the wastewater type and soluble carbon to nitrogen ratio. Denitrification improved the total nitrogen removal efficiency, and it was influenced by the biodegradable organic carbon to nitrogen ratio. The characteristic patterns of conductivity, oxidation-reduction potential (ORP) and pH in the SBR cycle were well related to biological processes. Conductivity profiles were found to be directly related to the decreasing profiles of ammonium. Positive ORP values at the end of the anoxic phases were detected for total nitrogen removal efficiency of lower than 85%, and the occurrence of bending points on the ORP curves during the anoxic phases was associated with nitrite depletion by the anammox process. Copyright © 2016 Elsevier Ltd. All rights reserved.

40 CFR 418.35 - Standards of performance for new sources.

Code of Federal Regulations, 2010 CFR

2010-07-01

...) EFFLUENT GUIDELINES AND STANDARDS FERTILIZER MANUFACTURING POINT SOURCE CATEGORY Urea Subcategory § 418.35... values for 30 consecutive days shall not exceed— Ammonia (as N) 0.53 0.27 Organic nitrogen (as N) .45 .24... Organic nitrogen (as N) .86 .46 Note: Metric units: Kilogram/1,000 kg of product; English units: Pound/1...

CHEMISTRY OF FOG WATERS IN CALIFORNIA'S CENTRAL VALLEY - PART 3: CONCENTRATIONS AND SPECIATION OF ORGANIC AND INORGANIC NITROGEN. (R825433)

EPA Science Inventory

Although organic nitrogen (ON) has been found to be a ubiquitous and significant component in wet and dry deposition, almost nothing is known about its concentration or composition in fog waters. To address this gap, we have investigated the concentration and composition of ON...

Leaf-litter inputs from an invasive nitrogen-fixing tree influence organic-matter dynamics and nitrogen inputs in a Hawaiian river

Treesearch

Richard A. MacKenzie; Tracy N. Wiegner; Frances Kinslow; Nicole Cormier; Ayron M. Strauch

2013-01-01

Abstract. We examined how invasion of tropical riparian forests by an exotic N-fixing tree (Falcataria moluccana) affects organic-matter dynamics in a Hawaiian river by comparing early stages of leaf-litter breakdown between the exotic F. moluccana and native Metrosideros polymorpha trees. We examined early...

Long-term changes in soil organic carbon and nitrogen under semiarid tillage and cropping practices

USDA-ARS?s Scientific Manuscript database

Understanding long-term changes in soil organic carbon (SOC) and total soil nitrogen (TSN) is important for evaluating C fluxes and optimizing N management. We evaluated long-term SOC and TSN changes under dryland rotations for historical stubble-mulch (HSM) and graded terrace (GT) plots on a clay l...

Acetolactate metabolism and the presence of a dehydroxy acid dehydratase in micro-organisms

PubMed Central

Wixom, R. L.

1965-01-01

1. The growth characteristics of nine micro-organisms on complex broth and defined media, usually with a single nitrogen source (other than vitamins), were examined as a necessary step before growth of cells for enzyme assays. Six of these bacteria gave a positive colour test with a creatine–potassium hydroxide reagent, indicating the presence of acetoin, which other investigators have shown is formed via the intermediate, α-acetolactate. 2. Cell-free extracts of exponential-phase cells of Bacillus subtilis, Staphylococcus aureus, Proteus morganii, Acetobacter rancens (two strains), A. kuetzingianus, A. acetosus, Acetomonas (Acetobacter) melanogenus and Acetomonas (Acetobacter) suboxydans (A.T.C.C. no. 621) were found to contain the enzyme, dihydroxy acid dehydratase (2,3-dihydroxy acid hydro-lyase). 3. The specific activity of the dehydratase from organisms grown on valine- and isoleucine-deficient media was greater than those grown on a complex broth or media containing complete amino acid mixtures. The omission of valine plus isoleucine from a medium containing 19 amino acids caused an increase in the dehydratase specific activity of Staphylococcus aureus and Proteus morganii. 4. The rate of keto acid formation from αβ-dihydroxyisovalerate by extracts of six of the above-named organisms was faster than, but somewhat proportional to, the similar rate from αβ-dihydroxy-β-methyl-n-valerate as substrate. 5. These findings may be related to acetolactate synthesis, acetoin formation and valine–isoleucine biosynthesis in the above-mentioned micro-organisms. PMID:14348203

Weak Hydrogen Bonds from Aliphatic and Fluorinated Alocohols to Molecular Nitrogen Detected by Supersonic Jet FTIR Spectroscopy

NASA Astrophysics Data System (ADS)

Oswald, Soenke; Suhm, Martin A.

2017-06-01

Complexes of organic molecules with the main component of earth's atmosphere are of interest, also for a stepwise understanding of the phenomenon of matrix isolation. Via its large quadrupole moment, nitrogen binds strongly to polarized OH groups in hydrogen-bonded dimers. Further complexation leads to a smooth spectral transition from free to embedded molecules which we probe in supersonic jets. Results for 1,1,1,3,3,3-hexafluoro-2-propanol, methanol, t-butyl alcohol, and the conformationally more complex ethanol are presented and assigned with the help of quantum chemical calculations. Kuma, S., Slipchenko, M. N., Kuyanov, K. E., Momose, T., Vilesov, A. F., Infrared Spectra and Intensities of the H_2O and N_2 Complexes in the Range of the ν_1- and ν_3-Bands of Water, J. Phys. Chem. A, 2006, 110, 10046-10052. Coussan, S., Bouteiller, Y., Perchard, J. P., Zheng, W. Q., Rotational Isomerism of Ethanol and Matrix Isolation Infrared Spectroscopy, J. Phys. Chem. A, 1998, 102, 5789-5793. Suhm, M. A., Kollipost, F., Femtisecond single-mole infrared spectroscopy of molecular clusters, Phys. Chem. Chem. Phys., 2013, 15, 10702-10721. Larsen, R. W., Zielke, P., Suhm, M. A., Hydrogen bonded OH stretching modes of methanol clusters: a combined IR and Raman isotopomer study, J. Chem. Phys., 2007, 126, 194307. Zimmermann, D., Häber, T., Schaal, H., Suhm, M. A., Hydrogen bonded rings, chains and lassos: The case of t-butyl alcohol clusters, Mol. Phys., 2001, 99, 413-425. Wassermann, T. N., Suhm, M. A., Ethanol Monomers and Dimers Revisited: A Raman Study of Conformational Preferences and Argon Nanocoating Effects, J. Phys. Chem. A, 2010, 114, 8223-8233.

[Effect of NH4(+) -N/NO3(-)-N ratio in applied supplementary fertilizer on nitrogen metabolism and main chemical composition of Pinellia ternata].

PubMed

Hu, Long-Jiao; Wang, Kang-Cai; Li, Can-Wen

2013-07-01

To study the effect of nitrogen forms on nitrogen metabolism and main chemical composition of Pinellia ternate. Through the soilless cultivation experiment and based at the same nitrogen level and different NH4(+) -N/NO3(-) -N ratios, nitrate reductase (NR) activity, glutamine synthetase (GS) activity, the content of nitrate nitrogen and ammonium nitrogen in different parts of P. ternate were determined. The contents of total alkaloid, free total organic acids and guanosine in the tuber were determined. The yield of bulbil and tuber was calculated. The test results showed that, with the NH4(+) -N/NO3(-) -N ratio increasing, the activity of nitrate reductase decreased, the content of nitrate nitrogen in the leaves, petioles and tuber increasing initially, then decreased, and the content of nitrate nitrogen in the root decreased. Meanwhile, with the NH4(+) -N/NO3(-) -N ratio increasing, the activity of glutamine synthetase in the leaves, petioles and root increased, the activity of glutamine synthetase in the tuber increasing initially, then decreased. The contents of ammonium nitrogen in the leaves, tuber and root increased initially, then decreased, and the contents of ammonium nitrogen in the petioles increased with the NH4(+)(-N/NO3(-)-N ratio increasing. The yield of bulbil and tuber were the highest at the NH4(+)-N/NO3(-) -N ratio of 75: 25. The content of total alkaloid and guanosine in the tuber were the highest at the NH4(+)-N/NO3(-) -N ratio of 0: 100, and the contents were 0.245% and 0.0197% respectively. With the NH4(+)-N/NO3(-) -N ratio of 50: 50, the content of free total organic acids was the highest, it reached 0.7%, however, the content of free total organic acids was the lowest at the NH4(+) -N/NO3(-) -N ratio of 0: 100. Nitrogen fertilization significant influences the nitrogen metabolism, the yield and main chemical composition of P. ternate.

Dissolved organic matter in the subterranean estuary of a volcanic island, Jeju: Importance of dissolved organic nitrogen fluxes to the ocean

NASA Astrophysics Data System (ADS)

Kim, Tae-Hoon; Kwon, Eunhwa; Kim, Intae; Lee, Shin-Ah; Kim, Guebuem

2013-04-01

We observed the origin, behavior, and flux of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), colored dissolved organic matter (CDOM), and dissolved inorganic nitrogen (DIN) in the subterranean estuary of a volcanic island, Jeju, Korea. The sampling of surface seawater and coastal groundwater was conducted in Hwasun Bay, Jeju, in three sampling campaigns (October 2010, January 2011, and June 2011). We observed conservative mixing of these components in this subterranean environment for a salinity range from 0 to 32. The fresh groundwater was characterized by relatively high DON, DIN, and CDOM, while the marine groundwater showed relatively high DOC. The DON and DIN fluxes through submarine groundwater discharge (SGD) in the groundwater of Hwasun Bay were estimated to be 1.3 × 105 and 2.9 × 105 mol d- 1, respectively. In the seawater of Hwasun Bay, the groundwater-origin DON was almost conservative while about 91% of the groundwater-origin DIN was removed perhaps due to biological production. The DON flux from the entire Jeju was estimated to be 7.9 × 108 mol yr- 1, which is comparable to some of the world's large rivers. Thus, our study highlights that DON flux through SGD is potentially important for delivery of organic nitrogen to further offshore while DIN is readily utilized by marine plankton in near-shore waters under N-limited conditions.

Theoretical Study on the Complexes of Benzene with Isoelectronic Nitrogen-Containing Heterocycles

PubMed Central

Wang, Weizhou; Hobza, Pavel

2008-01-01

The π–π interactions between benzene and the aromatic nitrogen heterocycles pyridine, pyrimidine, 1,3,5-triazine, 1,2,3-triazine, 1,2,4,5-tetrazine, and 1,2,3,4,5-pentazine are systematically investigated. The T-shaped structures of all complexes studied exhibit a contraction of the C—H bond accompanied by a rather large blue shift (40–52 cm−1) of its stretching frequency, and they are almost isoenergetic with the corresponding displaced-parallel structures at reliable levels of theory. With increasing number of nitrogen atoms in the heterocycle, the geometries, frequencies, energies, percentage of s character at C, and the electron density in the C—H σ antibonding orbital of the complexes all increase or decrease systematically. Decomposition analysis of the total binding energy showed that for all the complexes, the dispersion energy is the dominant attractive contribution, and a rather large attraction originating from electrostatic contribution is compensated by its exchange counterpart. PMID:18389512

Examining the coupling of carbon and nitrogen cycles in Southern Appalachian streams: Understanding the role of dissolved organic nitrogen

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lutz, Brian D; Bernhardt, Emily; Roberts, Brian

Although regional and global models of nitrogen (N) cycling typically focus on nitrate, dissolved organic nitrogen (DON) is the dominant form of nitrogen export from many watersheds and thus the dominant form of dissolved N in many streams. Our understanding of the processes controlling DON export from temperate forests is poor. In pristine systems, where biological N limitation is common, N contained in recalcitrant organic matter (OM) can dominate watershed N losses. This recalcitrant OM often has moderately constrained carbon:nitrogen (C:N) molar ratios ({approx}25-55) and therefore, greater DON losses should be observed in sites where there is greater total dissolvedmore » organic carbon (DOC) loss. In regions where anthropogenic N pollution is high, it has been suggested that increased inorganic N availability can reduce biological demand for organic N and therefore increase watershed DON losses. This would result in a positive correlation between inorganic and organic N concentrations across sites with varying N availability. In four repeated synoptic surveys of stream water chemistry from forested watersheds along an N loading gradient in the southern Appalachians, we found surprisingly little correlation between DON and DOC concentrations. Further, we found that DON concentrations were always significantly correlated with watershed N loading and stream water [NO{sub 3}{sup -}] but that the direction of this relationship was negative in three of the four surveys. The C:N molar ratio of dissolved organic matter (DOM) in streams draining watersheds with high N deposition was very high relative to other freshwaters. This finding, together with results from bioavailability assays in which we directly manipulated C and N availabilities, suggests that heterotrophic demand for labile C can increase as a result of dissolved inorganic N (DIN) loading, and that heterotrophs can preferentially remove N-rich molecules from DOM. These results are inconsistent with the two prevailing hypotheses that dominate interpretations of watershed DON loss. Therefore, we propose a new hypothesis, the indirect carbon control hypothesis, which recognizes that heterotrophic demand for N-rich DOM can keep stream water DON concentrations low when N is not limiting and heterotrophic demand for labile C is high.« less

Nitrogen Doped Carbon Nanotubes from Organometallic Compounds: A Review

PubMed Central

Nxumalo, Edward N.; Coville, Neil J.

2010-01-01

Nitrogen doped carbon nanotubes (N-CNTs) have become a topic of increased importance in the study of carbonaceous materials. This arises from the physical and chemical properties that are created when N is embedded in a CNT. These properties include modified chemical reactivity and modified conductivity and mechanical properties. A range of methodologies have been devised to synthesize N-CNTs. One of the procedures uses a floating catalyst in which an organometallic complex is decomposed in the gas phase in the presence of a nitrogen containing reactant to give N-CNTs. Most studies have been limited to ferrocene, ring substituted ferrocene and Fe(CO)5. This review covers the synthesis (and properties) of N-CNTs and other shaped carbon nanomaterials (SCNMs) produced using organometallic complexes. It summarizes the effects that physical parameters such as temperature, pressure, gas flow rates, type and concentration of N source etc. have on the N-CNT type, size and yields as well as the nitrogen content incorporated into the tubes that are produced from organometallic complexes. Proposed growth models for N-CNT synthesis are also reported.

Formation and occurrence of new polar iodinated disinfection byproducts in drinking water.

PubMed

Pan, Yang; Li, Wenbin; An, Hao; Cui, Hao; Wang, Ying

2016-02-01

During drinking water disinfection, iodinated disinfection byproducts (I-DBPs) can be generated through reactions between iodide, disinfectants, and natural organic matter. Drinking water I-DBPs have been increasingly attracting attention as emerging organic pollutants as a result of their significantly higher toxicity and growth inhibition than their chloro- and bromo-analogues. In this study, by adopting ultra performance liquid chromatography/electrospray ionization-triple quadrupole mass spectrometry precursor ion scan, multiple reaction monitoring, and product ion scan analyses, 11 new polar I-DBPs with confirmed structures and eight new polar I-DBPs with proposed structures were detected in simulated drinking water samples. Chloramination of simulated raw waters containing natural organic matter with higher aromaticity produced higher levels of new phenolic I-DBPs. Formation of new polar I-DBPs and total organic iodine (TOI) was most favored in chloramination, followed by chlorine dioxide treatment, and relatively minor in chlorination. Lower pH in chloramination substantially enhanced the formation of new polar I-DBPs and TOI. NH2Cl and dissolved organic nitrogen could be important nitrogen sources and precursors for formation of the two new nitrogenous phenolic I-DBPs. Notably, in tap water samples collected from nine major cities located in the Yangtze River Delta region of China, seven of the 11 new polar I-DBPs with confirmed structures were detected at levels from 0.11 to 28 ng/L, and the two new nitrogenous phenolic I-DBPs were ubiquitous with concentrations from 0.12 to 24 ng/L, likely due to the relatively high dissolved organic nitrogen levels in regional source waters. Copyright © 2015 Elsevier Ltd. All rights reserved.

Evidence of Anomalously Low δ13C of Marine Organic Matter in an Arctic Fjord

PubMed Central

Kumar, Vikash; Tiwari, Manish; Nagoji, Siddhesh; Tripathi, Shubham

2016-01-01

Accurate estimation of relative carbon deposition (marine vs. terrestrial) is required for understanding the global carbon budget, particularly in the Arctic region, which holds disproportionate importance with respect to global carbon cycling. Although the sedimentary organic matter (SOM) concentration and its isotopic composition are important tools for such calculations, uncertainties loom over estimates provided by organic-geochemical bulk parameters. We report carbon and nitrogen concentrations and isotopes (δ13C and δ15N) of SOM at an Arctic fjord namely Kongsfjorden. We find that the bound inorganic nitrogen (ammonium attached to the clay minerals) forms a significant proportion of total nitrogen concentration (~77% in the inner fjord to ~24% in the outer part). On removing the bound nitrogen, the C/N ratio shows that the SOM in the inner fjord is made up of terrestrial carbon while the outer fjord shows mixed marine-terrestrial signal. We further show that the marine organic matter is unusually more depleted in 13C (~−24‰) than the terrestrial organic matter (~−22.5‰). This particular finding also helps explain high δ13C values of SOM as noted by earlier studies in central Arctic sediments despite a high terrestrial contribution. PMID:27827457

Organics and nitrogen removal from textile auxiliaries wastewater with A2O-MBR in a pilot-scale.

PubMed

Sun, Faqian; Sun, Bin; Hu, Jian; He, Yangyang; Wu, Weixiang

2015-04-09

The removal of organic compounds and nitrogen in an anaerobic-anoxic-aerobic membrane bioreactor process (A(2)O-MBR) for treatment of textile auxiliaries (TA) wastewater was investigated. The results show that the average effluent concentrations of chemical oxygen demand (COD), ammonium nitrogen (NH4(+)-N) and total nitrogen (TN) were about 119, 3 and 48 mg/L under an internal recycle ratio of 1.5. The average removal efficiency of COD, NH4(+)-N and TN were 87%, 96% and 55%, respectively. Gas chromatograph-mass spectrometer analysis indicated that, although as much as 121 different types of organic compounds were present in the TA wastewater, only 20 kinds of refractory organic compounds were found in the MBR effluent, which could be used as indicators of effluents from this kind of industrial wastewater. Scanning electron microscopy analysis revealed that bacterial foulants were significant contributors to membrane fouling. An examination of foulants components by wavelength dispersive X-ray fluorescence showed that the combination of organic foulants and inorganic compounds enhanced the formation of gel layer and thus caused membrane fouling. The results will provide valuable information for optimizing the design and operation of wastewater treatment system in the textile industry. Copyright © 2015 Elsevier B.V. All rights reserved.

Nitrogen concentration and isotope dataset for environmental samples from 2012 and 2013, Barrow, Alaska

DOE Data Explorer

Jeff Heikoop; Heather Throckmorton

2015-05-15

Dataset includes nitrate concentrations for polygonal active layer samples, snowmelt; ammonium concentrations for active layer samples; nitrate isotopes for active layer samples, snowmelt, permafrost; ammonium isotopes for active layer samples; and nitrogen isotopes for soils and dissolved organic nitrogen extracted from soil pore waters.

[Microbial denitrogenation of fuel oil].

PubMed

Li, Shan-shan; Ma, Ting; Li, Guo-qiang; Liang, Feng-lai; Liu, Ru-lin

2006-12-01

The amount of organic nitrides contained in fuel oil is smaller than the one of organic sulfur compounds, but the existence of them is enough to affect the invariability of oil product greatly , and has a big effect on the color of oil. They also contribute to catalyst poisoning during the refining of crude oil, thus reducing the catalyzing rate of the catalyst and increasing process costs. Further more, some nitrogen organic compounds possess mutagenic and toxic activities. The combustion of these contaminants form nitrogen oxides (NOx), releasing of which to the air will cause the formation of acid rain and hence to air pollution. The classical hydroprocessing methods of nitrogen removal are costly and complicated, so the scientists are more and more interested in microbial denitrogenation. The aspects as follows are introduced, including the aromatic nitrogen compounds of fuel oil, the varieties of denitrogenation techincs, the classes of microbial denitrogenation and its biochemical pathways, molecular genetics developments of carbazole-degradative genes, and our opinion of the research direction in the future.

Simultaneous organic nitrogen and sulfate removal in an anaerobic GAC fluidised bed reactor.

PubMed

Fdz-Polanco, F; Fdz-Polanco, M; Fernandez, N; Urueña, M A; García, P A; Villaverde, S

2001-01-01

A granular activated carbon (GAC) anaerobic fluidised bed reactor treating vinasse from an ethanol distillery of sugar beet molasses was operated for 250 days under three different organic loading rates. The reactor showed good performance in terms of organic matter removal and methane production but an anomalous behaviour in terms of unusual high concentrations of molecular nitrogen and low concentration of hydrogen sulphide in the biogas. The analysis of the different nitrogenous and sulphur compounds and the mass balances of these species in the liquid and gas phases clearly indicated an uncommon evolution of nitrogen and sulphur in the reactor. Up to 55% of the TKN and up to 80% of the sulphur disappear in the liquid phase. This is the opposite to any previously reported results in the bibliography. The new postulated anaerobic process of ammonia and sulphate removal seems to follow the mechanism: SO4 = +2 NH4+-->S + N2 + 4H2O (delta G degree = -47.8 kJ/mol).

Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage

PubMed Central

Mosier, Annika C.; Miller, Christopher S.; Frischkorn, Kyle R.; Ohm, Robin A.; Li, Zhou; LaButti, Kurt; Lapidus, Alla; Lipzen, Anna; Chen, Cindy; Johnson, Jenifer; Lindquist, Erika A.; Pan, Chongle; Hettich, Robert L.; Grigoriev, Igor V.; Singer, Steven W.; Banfield, Jillian F.

2016-01-01

The ecosystem roles of fungi have been extensively studied by targeting one organism and/or biological process at a time, but the full metabolic potential of fungi has rarely been captured in an environmental context. We hypothesized that fungal genome sequences could be assembled directly from the environment using metagenomics and that transcriptomics and proteomics could simultaneously reveal metabolic differentiation across habitats. We reconstructed the near-complete 27 Mbp genome of a filamentous fungus, Acidomyces richmondensis, and evaluated transcript and protein expression in floating and streamer biofilms from an acid mine drainage (AMD) system. A. richmondensis transcripts involved in denitrification and in the degradation of complex carbon sources (including cellulose) were up-regulated in floating biofilms, whereas central carbon metabolism and stress-related transcripts were significantly up-regulated in streamer biofilms. These findings suggest that the biofilm niches are distinguished by distinct carbon and nitrogen resource utilization, oxygen availability, and environmental challenges. An isolated A. richmondensis strain from this environment was used to validate the metagenomics-derived genome and confirm nitrous oxide production at pH 1. Overall, our analyses defined mechanisms of fungal adaptation and identified a functional shift related to different roles in carbon and nitrogen turnover for the same species of fungi growing in closely located but distinct biofilm niches. PMID:26973616

Identification of a Novel Regulatory Mechanism of Nutrient Transport Controlled by TORC1-Npr1-Amu1/Par32

PubMed Central

Boeckstaens, Mélanie; Merhi, Ahmad; Llinares, Elisa; Van Vooren, Pascale; Springael, Jean-Yves; Wintjens, René; Marini, Anna Maria

2015-01-01

Fine-tuning the plasma-membrane permeability to essential nutrients is fundamental to cell growth optimization. Nutritional signals including nitrogen availability are integrated by the TORC1 complex which notably regulates arrestin-mediated endocytosis of amino-acid transporters. Ammonium is a ubiquitous compound playing key physiological roles in many, if not all, organisms. In yeast, it is a preferred nitrogen source transported by three Mep proteins which are orthologues of the mammalian Rhesus factors. By combining genetic, kinetic, biochemical and cell microscopy analyses, the current study reveals a novel mechanism enabling TORC1 to regulate the inherent activity of ammonium transport proteins, independently of arrestin-mediated endocytosis, identifying the still functional orphan Amu1/Par32 as a selective regulator intermediate. We show that, under poor nitrogen supply, the TORC1 effector kinase' Npr1' promotes phosphorylation of Amu1/Par32 which appears mainly cytosolic while ammonium transport proteins are active. Upon preferred nitrogen supplementation, like glutamine or ammonium addition, TORC1 upregulation enables Npr1 inhibition and Amu1/Par32 dephosphorylation. In these conditions, as in Npr1-lacking cells, hypophosphorylated Amu1/Par32 accumulates at the cell surface and mediates the inhibition of specific ammonium transport proteins. We show that the integrity of a conserved repeated motif of Amu1/Par32 is required for the interaction with these transport proteins. This study underscores the diversity of strategies enabling TORC1-Npr1 to selectively monitor cell permeability to nutrients by discriminating between transporters to be degraded or transiently inactivated and kept stable at the plasma membrane. This study further identifies the function of Amu1/Par32 in acute control of ammonium transport in response to variations in nitrogen availability. PMID:26172854

Quantifying manganese and nitrogen cycle coupling in manganese-rich, organic carbon-starved marine sediments: Examples from the Clarion-Clipperton fracture zone

NASA Astrophysics Data System (ADS)

Mogollón, José M.; Mewes, Konstantin; Kasten, Sabine

2016-07-01

Extensive deep-sea sedimentary areas are characterized by low organic carbon contents and thus harbor suboxic sedimentary environments where secondary (autotrophic) redox cycling becomes important for microbial metabolic processes. Simulation results for three stations in the Eastern Equatorial Pacific with low organic carbon content (<0.5 dry wt %) and low sedimentation rates (10-1-100 mm ky-1) show that ammonium generated during organic matter degradation may act as a reducing agent for manganese oxides below the oxic zone. Likewise, at these sedimentary depths, dissolved reduced manganese may act as a reducing agent for oxidized nitrogen species. These manganese-coupled transformations provide a suboxic conversion pathway of ammonium and nitrate to dinitrogen. These manganese-nitrogen interactions further explain the presence and production of dissolved reduced manganese (up to tens of μM concentration) in sediments with high nitrate (>20 μM) concentrations.

Synthesis of carbon-11, fluorine-18, and nitrogen-13 labeled radiotracers for biomedical applications

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fowler, J.S.; Wolf, A.P.

A number of reviews, many of them recent, have appeared on various aspects of /sup 11/C, /sup 18/F and /sup 13/N-labeled radiotracers. This monograph treats the topic principally from the standpoint of synthetic organic chemistry while keeping in perspective the necessity of integrating the organic chemistry with the design and ultimate application of the radiotracer. Where possible, recent examples from the literature of organic synthesis are introduced to suggest potentially new routes which may be applied to problems in labeling organic molecules with the short-lived positron emitters, carbon-11, fluorine-18, and nitrogen-13. The literature survey of carbon-11, fluorine-18 and nitrogen-13 labeledmore » compounds presented are of particular value to scientists working in this field. Two appendices are also included to provide supplementary general references. A subject index concludes this volume.« less

Monoterpenes are the largest source of summertime organic aerosol in the southeastern United States

DOE PAGES

Zhang, Haofei; Yee, Lindsay D.; Lee, Ben H.; ...

2018-02-12

The chemical complexity of atmospheric organic aerosol (OA) has caused substantial uncertainties in understanding its origins and environmental impacts. Here, we provide constraints on OA origins through compositional characterization with molecular-level details. Our results suggest that secondary OA (SOA) from monoterpene oxidation accounts for approximately half of summertime fine OA in Centreville, AL, a forested area in the southeastern United States influenced by anthropogenic pollution. We find that different chemical processes involving nitrogen oxides, during days and nights, play a central role in determining the mass of monoterpene SOA produced. These findings elucidate the strong anthropogenic–biogenic interaction affecting ambient aerosolmore » in the southeastern United States and point out the importance of reducing anthropogenic emissions, especially under a changing climate, where biogenic emissions will likely keep increasing.« less

Monoterpenes are the largest source of summertime organic aerosol in the southeastern United States

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Haofei; Yee, Lindsay D.; Lee, Ben H.

The chemical complexity of atmospheric organic aerosol (OA) has caused substantial uncertainties in understanding its origins and environmental impacts. Here, we provide constraints on OA origins through compositional characterization with molecular-level details. Our results suggest that secondary OA (SOA) from monoterpene oxidation accounts for approximately half of summertime fine OA in Centreville, AL, a forested area in the southeastern United States influenced by anthropogenic pollution. We find that different chemical processes involving nitrogen oxides, during days and nights, play a central role in determining the mass of monoterpene SOA produced. These findings elucidate the strong anthropogenic–biogenic interaction affecting ambient aerosolmore » in the southeastern United States and point out the importance of reducing anthropogenic emissions, especially under a changing climate, where biogenic emissions will likely keep increasing.« less

Heat impact caused molecular level changes in solid and dissolved soil organic matter

NASA Astrophysics Data System (ADS)

Hofmann, Diana; Steffen, Bernhard; Eckhardt, Kai-Uwe; Leinweber, Peter

2015-04-01

The ubiquitous abundance of pyrolysed, highly aromatic organic matter, called "Black Carbon" (BC), in all environmental compartments became increasingly important in different fields of research beyond intensive investigated atmospheric aerosol due to climatic relevance. Its predominant high resistance to abiotic and biotic degradation resulted in turnover times from less than a century to several millennia. This recalcitrance led to the enrichment of BC in soils, accounting for 1-6% (European forest soils) to 60% (Chernozems) of total soil organic matter (SOM). Hence, soil BC acts an important sink in the global carbon cycle. In contrast, consequences for the nitrogen cycle up to date are rather inconsistently discussed. Soil related dissolved organic matter (DOM) is a major controlling factor in soil formation, an important pathway of organic matter transport and one of the largest active carbon reservoirs on earth, if considering oceans and other bodies of water. The aim of this study was to evaluate the effects of artificially simulated wildfire by thermal treatment on the molecular composition of water extractable soil organic matter (DOM). Soils from two outdoor lysimeters with different management history were investigated. Soil samples, non-heated and heated up to 350°C were analyzed for elemental composition (carbon, nitrogen and sulfur) and for bulk molecular composition by Pyrolysis-Field Ionization Mass Spectrometry (Py-FIMS) and synchrotron-based X-ray Absorption Near-Edge Spectroscopy (XANES) at the C- and N K-edges. DOM-samples obtained by hot water extraction, desalting and concentration by solid phase extraction were subsequently analyzed by flow injection analysis in a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer (FTICR-MS), equipped with an ESI source and a 7 T supra-conducting magnet (LTQ-FT Ultra, ThermoFisher Scientific). This technique is the key technique for the analysis of complex samples due to its outstanding mass resolution (used 400.000 at m/z 400 Da) and mass accuracy (≤ 1 ppm), simultaneously providing molecular level details of thousands of compounds. The characteristics and differences of the FTICR-MS spectra with as many as ten or more peaks at each nominal mass are discussed: heated samples showed considerable higher intensities of even numbered peaks. An in-house developed, automated post processing was used for further exploitation of the data with the aim of an unambiguous assignment of as many peaks as possible. Obtained mass lists were transformed for sorting and preparation/ interpretation of graphics like Kendrick and van Krevelen plots. The heat-treated solid samples show decreasing C/N ratios and the formation cyclic and N-heterocyclic compounds in good agreement among the various methods (Py-FIMS and C- and N-XANES). Detailed insight into the hot-water extracts by FTICR-MS showed clear qualitative as well as quantitative changes in the number and the intensity of nitrogen and nitrogen + sulfur containing compounds, respectively, which generally became enriched under soil heating. This demonstrates for the first time, that not only the bulk SOM is affected in structure by heat impact but also the more mobile DOM. We assume, that heat impact volatilizes and oxidizes parts of the organic substances is as expected but another part of the substances incorporates (further) nitrogen atom(s) similar to the generation of new compounds under the conditions of plasma etching in nitrogen atmosphere. This would explain to some extent, why soils are e.g. after fire clearing of vegetation are highly fertile for a short period (better plant acceptable compounds) but become more infertile in the long run, especially under tropical conditions with frequently heavy rain that would lead to an increased leaching of compounds with higher polarity.

Integrated modelling of nitrogen transport and turnover in lowland catchements of northern Germany

NASA Astrophysics Data System (ADS)

Wriedt, G.

2003-04-01

Nitrogen loads in surface water often do not reflect the actual input situation. This retention of nitrogen can be explained by chemical transformations in the soil and groundwater (e.g. denitrification) and hydrological factors (e.g. transition time, mixing) in soil and groundwater and depends strongly on the geological and chemical patterns within the catchment areas (e.g. reactive substances, conductivities). In order to facilitate modelling studies on the relation between nitrogen transport and catchment characteristics we developed a modelling approach, that allows simulation of the complete nitrogen transport path from the soil input until the exfiltration into the surface water system. This approach is based on the loose coupling of a soil water model and an analytical soil nitrogen model (mRISK-N) with a groundwater flow model (MODFLOW) and a multi-species reactive transport model (RT3D). Groundwater nitrogen turnover is represented by a closed reaction scheme that explicitly includes oxidation of organic matter and pyrite oxidation by several electron acceptors as the main reactive pathways, in order to link nitrogen turnover directly to the availability of the substances involved in the chemical reactions. This reaction module has been implemented into the modelling system as a user defined reaction module within the RT3D-environment. The soil submodel was tested against lysimeter data. It was found, that soil water balance was represented quite well. Nitrogen leaching rates however, can only be interpreted for larger time scales, whereas considerable deviations from measured values do occur in single years. Nevertheless, model performance is comparable to other, more complex soil water and nitrogen models currently available. It was found, that the high uncertainty of model parameters and input data as well as limited knowledge on processes limit the accuracy of soil nitrogen models in general. The next step of the project is the model application in the study area “Schaugraben catchment”. The study area is located near Osterburg/Altmark in the north of Sachsen-Anhalt, its size is about 25 km2. The geology is determined by pleistocene deposits, mainly glacial till in the plateau areas and glaciofluvial sandy deposits in the valleys. A dense drainage network, a high groundwater table and intensive agricultural use provide a high risk for both, groundwater and surface water quality. Model application focuses on the analysis of the interactions between catchment characteristics (hydrological and geological), spatial input patterns and the fate of nitrogen within the catchment. This is done by applying sensitivity analysis, uncertainty analysis and scenario simulation. A three dimensional groundwater flow model for the Schaugraben area has been set up and calibrated in order to analyse the regional flow paths, transition times and groundwater catchments. More detailed modelling studies including the reactive groundwater transport are performed on selected cutouts and transects, defining specific hydrogeological settings, e.g. riparian areas, buffer stripes, hydrological windows etc. Under special consideration is also the influence of spatial input patterns of nitrate and organic matter leaching to the groundwater. Results of the modelling studies are expect until March ‘03. The modelling approach developed here is a tool for the assessment of transport-turnover interaction and may help to improve experimental studies and measurement strategies and to provide useful information for managing purposes.

The dependence of the discharge of nitrous oxide by ordinary chernozem steppe of the Central-Chernozem Region of Russia from the content of humus, nitrogen and enzymatic activity

NASA Astrophysics Data System (ADS)

Avksentev, Alexey; Negrobova, Elena; Kramareva, Tatiana; Moiseeva, Evgenya

2016-04-01

The dependence of the discharge of nitrous oxide by ordinary chernozem steppe of the Central-Chernozem Region of Russia from the content of humus, nitrogen and enzymatic activity Alexey Avksentev, Elena Negrobova, Tatiana Kramareva, Evgenya Moiseeva 394000 Voronezh, Universitetskaya square, 1 Voronezh State University Nitrous oxide is emitted by soil as a result of microbiological processes, ranks third in the list of aggressive greenhouse gas after carbon dioxide and methane. Nitrous oxide is formed during nitrification and denitrification of ammonia that enters the soil during microbial decomposition of complex organic compounds. Denitrification can be direct and indirect. In the microbiological process of recovery of nitrates involved of the organic substance. In aerobic conditions microorganisms denitrificator behave like normal saprotrophs and oxidize organic matter in the act of breathing oxygen. Thus, they operate at different times two enzyme systems: the electron transport chain with an oxygen acceptor in aerobic and restoration of nitrates under anaerobic conditions. Investigation of the emission of nitrous oxide by ordinary Chernozem steppe of the Central-Chernozem Region showed that it depends on the type of cenosis and the content of available forms of nitrogen. Natural ecosystems emit nitrous oxide more than the soil of arable land. The dependence of the emission of nitrous oxide from the humus content shows positive trend, but the aggregation of data, significant differences are not detected. Research shows that nitrous oxide emissions are seasonal. So the autumn season is characterized by nitrous oxide emissions than spring. Enzymatic processes are an important link in the biological cycle of elements and, consequently, participate in the process of decomposition of organic matter, nitrification and other processes. Analysis of the data on enzyme activity of ordinary Chernozem and the intensity of emission of N20 shows a clear relationship between invertase, urease activity and emission of nitrous oxide, which is confirmed by the correlation coefficient R=0,78-0,79. Analysis of data on physical characteristics of common Chernozem shows that the relationship between nitrous oxide emissions and the density of the solid phase of the soil and the density of the composition of the soil and total porosity is not significant (R=0.4) and is not limiting. A limiting factor of N20 flux from ordinary Chernozem is the presence of available forms of nitrogen.

Efficient assimilation of cyanobacterial nitrogen by water hyacinth.

PubMed

Qin, Hongjie; Zhang, Zhiyong; Liu, Minhui; Wang, Yan; Wen, Xuezheng; Yan, Shaohua; Zhang, Yingying; Liu, Haiqin

2017-10-01

A 15 N labeling technique was used to study nitrogen transfer from cyanobacterium Microcystis aeruginosa to water hyacinth. 15 N atom abundance in M. aeruginosa peaked (15.52%) after cultivation in 15 N-labeled medium for 3weeks. Over 87% of algal nitrogen was transferred into water hyacinth after the 4-week co-cultivation period. The nitrogen quickly super-accumulated in the water hyacinth roots, and the labeled nitrogen was re-distributed to different organs (i.e., roots, stalks, and leaves). This study provides a new strategy for further research on cyanobacterial bloom control, nitrogen migration, and nitrogen cycle in eutrophic waters. Copyright © 2017 Elsevier Ltd. All rights reserved.

The generalized anomeric effect in the 1,3-thiazolidines: Evidence for both sulphur and nitrogen as electron donors. Crystal structures of various N-acylthiazolidines including mercury(II) complexes. Possible relevance to penicillin action

NASA Astrophysics Data System (ADS)

Chandrasekhar, Sosale; Chopra, Deepak; Gopalaiah, Kovuru; Guru Row, Tayur N.

2007-06-01

Evidence for the generalized anomeric effect (GAE) in the N-acyl-1,3-thiazolidines, an important structural motif in the penicillins, was sought in the crystal structures of N-(4-nitrobenzoyl)-1,3-thiazolidine and its (2:1) complex with mercuric chloride, N-acetyl-2-phenyl-1,3-thiazolidine, and the (2:1) complex of N-benzoyl-1,3-thiazolidine with mercuric bromide. An inverse relationship was generally observed between the C2- N and C2- S bond lengths of the thiazolidine ring, supporting the existence of the GAE. (Maximal bond length changes were ˜0.04 Å for C2- N3, S1- C2, and ˜0.08 Å for N3- C6.) Comparison with N-acylpyrrolidines and tetrahydrothiophenes indicates that both the nitrogen-to-sulphur and sulphur-to-nitrogen GAE's operate simultaneously in the 1,3-thiazolidines, the former being dominant. (This is analogous to the normal and exo-anomeric effects in pyranoses, and also leads to an interesting application of Baldwin's rules.) The nitrogen-to-sulphur GAE is generally enhanced in the mercury(II) complexes (presumably via coordination at the sulphur); a 'competition' between the GAE and the amide resonance of the N-acyl moiety is apparent. There is evidence for a 'push-pull' charge transfer between the thiazolidine moieties in the mercury(II) complexes, and for a 'back-donation' of charge from the bromine atoms to the thiazolidine moieties in the HgBr 2 complex. (The sulphur atom appears to be sp 2 hybridised in the mercury(II) complexes, possibly for stereoelectronic reasons.) These results are apparently relevant to the mode of action of the penicillins.

Biomass production and secretion of hydrolytic enzymes are influenced by the structural complexity of the nitrogen source in Fusarium oxysporum and Aspergillus nidulans.

PubMed

da Silva, M C; Bertolini, M C; Ernandes, J R

2001-01-01

The structural complexity of the nitrogen sources strongly affects biomass production and secretion of hydrolytic enzymes in filamentous fungi. Fusarium oxysporum and Aspergillus nidulans were grown in media containing glucose or starch, and supplemented with a nitrogen source varying from a single ammonium salt (ammonium sulfate) to free amino acids (casamino acids), peptides (peptone) and protein (gelatin). In glucose, when the initial pH was adjusted to 5.0, for both microorganisms, higher biomass production occurred upon supplementation with a nitrogen source in the peptide form (peptone and gelatin). With a close to neutrality pH, biomass accumulation was lower only in the presence of the ammonium salt. When grown in starch, biomass accumulation and secretion of hydrolytic enzymes (amylolytic and proteolytic) by Fusarium also depended on the nature of the nitrogen supplement and the pH. When the initial pH was adjusted to 5.0, higher growth and higher amylolytic activities were detected in the media supplemented with peptone, gelatin and casamino acids. However, at pH 7.0, higher biomass accumulation and higher amylolytic activities were observed upon supplementation with peptone or gelatin. Ammonium sulfate and casamino acids induced a lower production of biomass, and a different level of amylolytic enzyme secretion: high in ammonium sulfate and low in casamino acids. Secretion of proteolytic activity was always higher in the media supplemented with peptone and gelatin. Aspergillus, when grown in starch, was not as dependent as Fusarium on the nature of nitrogen source or the pH. The results described in this work indicate that the metabolism of fungi is regulated not only by pH, but also by the level of structural complexity of the nitrogen source in correlation to the carbon source.

Wet Oxidation as a Waste Treatment Method in Closed Systems

NASA Technical Reports Server (NTRS)

Onisko, B. L.; Wydeven, T.

1982-01-01

The chemistry of the wet oxidation process was investigated in relation to production of plant nutrients from plant and human waste materials as required for a closed life support system. Hydroponically grown lettuce plants were used as a model plant waste, and oxygen gas was used as an oxidant. Organic nitrogen content was decreased 88-100%, depending on feed material. Production of ammonia and nitrogen gas accounted for all of the observed decrease in organic nitrogen content. No nitrous oxide (N2O) was detected. The implications of these results for closed life support systems are discussed.

Wet oxidation as a waste treatment in closed systems

NASA Technical Reports Server (NTRS)

Onisko, B. L.; Wydeven, T.

1981-01-01

The chemistry of the wet oxidation process has been investigated in relation to production of plant nutrients from plant and human waste materials as required for a closed life-support system. Hydroponically grown lettuce plants were used as a model plant waste and oxygen gas was used as oxidant. Organic nitrogen content was decreased 88-100% depending on feed material. Production of ammonia and nitrogen gas account for all of the observed decrease in organic nitrogen content. No nitrous oxide (N2O) was detected. The implications of these results for closed life-support systems are discussed.

The production of cyanobacterial carbon under nitrogen-limited cultivation and its potential for nitrate removal.

PubMed

Huang, Yingying; Li, Panpan; Chen, Guiqin; Peng, Lin; Chen, Xuechu

2018-01-01

Harmful cyanobacterial blooms (CyanoHABs) represent a serious threat to aquatic ecosystems. A beneficial use for these harmful microorganisms would be a promising resolution of this urgent issue. This study applied a simple method, nitrogen limitation, to cultivate cyanobacteria aimed at producing cyanobacterial carbon for denitrification. Under nitrogen-limited conditions, the common cyanobacterium, Microcystis, efficiently used nitrate, and had a higher intracellular C/N ratio. More importantly, organic carbons easily leached from its dry powder; these leachates were biodegradable and contained a larger amount of dissolved organic carbon (DOC) and carbohydrates, but a smaller amount of dissolved total nitrogen (DTN) and proteins. When applied to an anoxic system with a sediment-water interface, a significant increase of the specific NO X - -N removal rate was observed that was 14.2 times greater than that of the control. This study first suggests that nitrogen-limited cultivation is an efficient way to induce organic and carbohydrate accumulation in cyanobacteria, as well as a high C/N ratio, and that these cyanobacteria can act as a promising carbon source for denitrification. The results indicate that application as a carbon source is not only a new way to utilize cyanobacteria, but it also contributes to nitrogen removal in aquatic ecosystems, further limiting the proliferation of CyanoHABs. Copyright © 2017. Published by Elsevier Ltd.

91. VIEW OF OXYGEN AND GASEOUS NITROGEN TANKS AND OXIDIZER ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

91. VIEW OF OXYGEN AND GASEOUS NITROGEN TANKS AND OXIDIZER APRON FROM NORTH - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 East, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

Development of Chemical Indicators of Groundwater Contamination Near the Carcass Burial Site

NASA Astrophysics Data System (ADS)

Kim, H.; Choi, J.; Kim, M.; Choi, J.; Lee, M.; Lee, H.; Jeon, S.; Bang, S.; Noh, H.; Yoo, J.; Park, S.; Kim, H.; Kim, D.; Lee, Y.; Han, J.

2011-12-01

A serious outbreak of foot and mouth disease (FMD) and avian influenza (AI) led to the culling of millions of livestock in South Korea from late 2010 to earlier 2011. Because of the scale of FMD and AI epidemic in Korea and rapid spread of the diseases, mass burial for the disposal of carcass was conducted to halt the outbreak. The improper construction of the burial site or inappropriate management of the carcass burial facility can cause the contamination of groundwater mainly due to the discharges of leachate through the base of disposal pit. The leachate from carcass burial contains by products of carcass decay such as amino acids, nitrate, ammonia and chloride. The presence of these chemical components in groundwater can be used as indicators demonstrating contamination of groundwater with leachate from carcass. The major concern about using these chemical indicators is that other sources including manures, fertilizers and waste waters from human or animal activities already exist in farming area. However, we lack the understanding of how groundwater contamination due to mass burial of carcass can be differentiated from the contamination due to livestock manures which shows similar chemical characteristics. The chemical compositions of the leachate from carcass burial site and the wastewater from livestock manure treatment facilities were compared. The chemical compositions considered include total organic carbon (TOC), total nitrogen (TN), nitrate, organic nitrogen (Organic nitrogen =TN-Ammonium Nitrogen- Nitrate nitrogen), ammonia, chloride, sodium, potassium and amino acids (20 analytes). The ratios of concentrations of the chemical compositions as indicators of contamination were determined to distinguish the sources of contamination in groundwater. Indicators which showed a linear relationship between two factors and revealed a distinct difference between the carcass leachate and livestock manure were chosen. In addition, the background level of the indicators in groundwater which was presumed not to be contaminated with the leachate was also considered. The indicators selected from these step were TN/nitrate nitrogen, organic nitrogen/TN, organic nitrogen/Cl and organic nitrogen/Na. In a similar manner, concentrations and peak pattern of amino acids with LC-MSMS as indicators were also selected. One more step added to identify the source of a contaminant release was the consideration of the transport of 20 amino acids in the subsurface which could significantly change the peak pattern among different amino acids. Six group of amino acid as indicators were chosen and they were Isoleucine/Valine, Leucine/Tryptophane, Valine/Tryptophane, Lysine/Leucine, Lysine/Isoleucine and Methionine/Lysine. The use of chemical indicators was attempted in this study to distinguish the sources of contamination by considering both the concentration of contaminants and the unique patterns of contamination.

Spatial distribution of soil organic carbon and total nitrogen based on GIS and geostatistics in a small watershed in a hilly area of northern China.

PubMed

Peng, Gao; Bing, Wang; Guangpo, Geng; Guangcan, Zhang

2013-01-01

The spatial variability of soil organic carbon (SOC) and total nitrogen (STN) levels is important in both global carbon-nitrogen cycle and climate change research. There has been little research on the spatial distribution of SOC and STN at the watershed scale based on geographic information systems (GIS) and geostatistics. Ninety-seven soil samples taken at depths of 0-20 cm were collected during October 2010 and 2011 from the Matiyu small watershed (4.2 km(2)) of a hilly area in Shandong Province, northern China. The impacts of different land use types, elevation, vegetation coverage and other factors on SOC and STN spatial distributions were examined using GIS and a geostatistical method, regression-kriging. The results show that the concentration variations of SOC and STN in the Matiyu small watershed were moderate variation based on the mean, median, minimum and maximum, and the coefficients of variation (CV). Residual values of SOC and STN had moderate spatial autocorrelations, and the Nugget/Sill were 0.2% and 0.1%, respectively. Distribution maps of regression-kriging revealed that both SOC and STN concentrations in the Matiyu watershed decreased from southeast to northwest. This result was similar to the watershed DEM trend and significantly correlated with land use type, elevation and aspect. SOC and STN predictions with the regression-kriging method were more accurate than those obtained using ordinary kriging. This research indicates that geostatistical characteristics of SOC and STN concentrations in the watershed were closely related to both land-use type and spatial topographic structure and that regression-kriging is suitable for investigating the spatial distributions of SOC and STN in the complex topography of the watershed.

Spatial Distribution of Soil Organic Carbon and Total Nitrogen Based on GIS and Geostatistics in a Small Watershed in a Hilly Area of Northern China

PubMed Central

Peng, Gao; Bing, Wang; Guangpo, Geng; Guangcan, Zhang

2013-01-01

The spatial variability of soil organic carbon (SOC) and total nitrogen (STN) levels is important in both global carbon-nitrogen cycle and climate change research. There has been little research on the spatial distribution of SOC and STN at the watershed scale based on geographic information systems (GIS) and geostatistics. Ninety-seven soil samples taken at depths of 0–20 cm were collected during October 2010 and 2011 from the Matiyu small watershed (4.2 km2) of a hilly area in Shandong Province, northern China. The impacts of different land use types, elevation, vegetation coverage and other factors on SOC and STN spatial distributions were examined using GIS and a geostatistical method, regression-kriging. The results show that the concentration variations of SOC and STN in the Matiyu small watershed were moderate variation based on the mean, median, minimum and maximum, and the coefficients of variation (CV). Residual values of SOC and STN had moderate spatial autocorrelations, and the Nugget/Sill were 0.2% and 0.1%, respectively. Distribution maps of regression-kriging revealed that both SOC and STN concentrations in the Matiyu watershed decreased from southeast to northwest. This result was similar to the watershed DEM trend and significantly correlated with land use type, elevation and aspect. SOC and STN predictions with the regression-kriging method were more accurate than those obtained using ordinary kriging. This research indicates that geostatistical characteristics of SOC and STN concentrations in the watershed were closely related to both land-use type and spatial topographic structure and that regression-kriging is suitable for investigating the spatial distributions of SOC and STN in the complex topography of the watershed. PMID:24391791