Sample records for complex precipitation pathways

  1. Structure and stability of hexa-aqua V(III) cations in vanadium redox flow battery electrolytes.

    PubMed

    Vijayakumar, M; Li, Liyu; Nie, Zimin; Yang, Zhenguo; Hu, JianZhi

    2012-08-07

    The vanadium(III) cation structure in mixed acid based electrolyte solution from vanadium redox flow batteries is studied by (17)O and (35/37)Cl nuclear magnetic resonance (NMR) spectroscopy, electronic spectroscopy and density functional theory (DFT) based computational modelling. Both computational and experimental results reveal that the V(III) species can complex with counter anions (sulfate/chlorine) depending on the composition of its solvation sphere. By analyzing the powder precipitate it was found that the formation of sulfate complexed V(III) species is the crucial process in the precipitation reaction. The precipitation occurs through nucleation of neutral species formed through deprotonation and ion-pair formation process. However, the powder precipitate shows a multiphase nature which warrants multiple reaction pathways for precipitation reaction.

  2. Group precipitation and age hardening of nanostructured Fe-based alloys with ultra-high strengths

    DOE PAGES

    Jiao, Z. B.; Luan, J. H.; Miller, M. K.; ...

    2016-02-19

    The precipitation of nanoparticles plays a key role in determining the properties of many structural materials, and the understanding of their formation and stabilization mechanisms has been a long standing interest in the material field. However, the critical issues involving the group precipitation of various nanoparticles and their cooperative hardening mechanism remain elusive in the newly discovered Fe-based alloys with nanostructures. Here we quantitatively elucidate the nucleation mechanism, evolution kinetics and hardening effects of the group-precipitated nanoparticles in the Fe-Cu-Ni-Al-based alloys by atom probe tomography together with both first-principles and thermodynamic calculations. Our results provide the compelling evidence for twomore » interesting but complex group precipitation pathways of nanoparticles, i.e., the Cu-rich and NiAl-based precipitations. Lastly, the co-existence of the two precipitation pathways plays a key role in age hardening kinetics and ultimately enhances the hardening response, as compared to the single particle type of strengthening, therefore providing an effective new approach for strengthening materials for structural applications.« less

  3. Group precipitation and age hardening of nanostructured Fe-based alloys with ultra-high strengths

    PubMed Central

    Jiao, Z. B.; Luan, J. H.; Miller, M. K.; Yu, C. Y.; Liu, C. T.

    2016-01-01

    The precipitation of nanoparticles plays a key role in determining the properties of many structural materials, and the understanding of their formation and stabilization mechanisms has been a long standing interest in the material field. However, the critical issues involving the group precipitation of various nanoparticles and their cooperative hardening mechanism remain elusive in the newly discovered Fe-based alloys with nanostructures. Here we quantitatively elucidate the nucleation mechanism, evolution kinetics and hardening effects of the group-precipitated nanoparticles in the Fe-Cu-Ni-Al-based alloys by atom probe tomography together with both first-principles and thermodynamic calculations. Our results provide the compelling evidence for two interesting but complex group precipitation pathways of nanoparticles, i.e., the Cu-rich and NiAl-based precipitations. The co-existence of the two precipitation pathways plays a key role in age hardening kinetics and ultimately enhances the hardening response, as compared to the single particle type of strengthening, therefore providing an effective new approach for strengthening materials for structural applications. PMID:26892834

  4. Hydrological Response and Complex Impact Pathways of the 2015/2016 El Niño in Eastern and Southern Africa

    NASA Astrophysics Data System (ADS)

    Siderius, C.; Gannon, K. E.; Ndiyoi, M.; Opere, A.; Batisani, N.; Olago, D.; Pardoe, J.; Conway, D.

    2018-01-01

    The 2015/2016 El Niño has been classified as one of the three most severe on record. El Niño teleconnections are commonly associated with droughts in southern Africa and high precipitation in eastern Africa. Despite their relatively frequent occurrence, evidence for their hydrological effects and impacts beyond agriculture is limited. We examine the hydrological response and impact pathways of the 2015/2016 El Niño in eastern and southern Africa, focusing on Botswana, Kenya, and Zambia. We use in situ and remotely sensed time series of precipitation, river flow, and lake levels complemented by qualitative insights from interviews with key organizations in each country about awareness, impacts, and responses. Our results show that drought conditions prevailed in large parts of southern Africa, reducing runoff and contributing to unusually low lake levels in Botswana and Zambia. Key informants characterized this El Niño through record high temperatures and water supply disruption in Botswana and through hydroelectric load shedding in Zambia. Warnings of flood risk in Kenya were pronounced, but the El Niño teleconnection did not materialize as expected in 2015/2016. Extreme precipitation was limited and caused localized impacts. The hydrological impacts in southern Africa were severe and complex, strongly exacerbated by dry antecedent conditions, recent changes in exposure and sensitivity and management decisions. Improved understanding of hydrological responses and the complexity of differing impact pathways can support design of more adaptive, region-specific management strategies.

  5. Investigating low flow process controls, through complex modelling, in a UK chalk catchment

    NASA Astrophysics Data System (ADS)

    Lubega Musuuza, Jude; Wagener, Thorsten; Coxon, Gemma; Freer, Jim; Woods, Ross; Howden, Nicholas

    2017-04-01

    The typical streamflow response of Chalk catchments is dominated by groundwater contributions due the high degree of groundwater recharge through preferential flow pathways. The groundwater store attenuates the precipitation signal, which causes a delay between the corresponding high and low extremes in the precipitation and the stream flow signals. Streamflow responses can therefore be quite out of phase with the precipitation input to a Chalk catchment. Therefore characterising such catchment systems, including modelling approaches, clearly need to reproduce these percolation and groundwater dominated pathways to capture these dominant flow pathways. The simulation of low flow conditions for chalk catchments in numerical models is especially difficult due to the complex interactions between various processes that may not be adequately represented or resolved in the models. Periods of low stream flows are particularly important due to competing water uses in the summer, including agriculture and water supply. In this study we apply and evaluate the physically-based Pennstate Integrated Hydrologic Model (PIHM) to the River Kennet, a sub-catchment of the Thames Basin, to demonstrate how the simulations of a chalk catchment are improved by a physically-based system representation. We also use an ensemble of simulations to investigate the sensitivity of various hydrologic signatures (relevant to low flows and droughts) to the different parameters in the model, thereby inferring the levels of control exerted by the processes that the parameters represent.

  6. Moisture sources and pathways associated with the spatial variability of seasonal extreme precipitation over Canada

    NASA Astrophysics Data System (ADS)

    Tan, Xuezhi; Gan, Thian Yew; Chen, Yongqin David

    2018-01-01

    Nine regions with spatially coherent seasonal 3-day total precipitation extremes across Canada were identified using a clustering method that is compliant to the extreme value theory. Using storm back-trajectory analyses, we then identified possible moisture sources and pathways that are conducive to occurrences of seasonal extreme precipitation events in four seasons for the nine regions identified. Moisture pathways for all extreme precipitation events were clustered to nine dominant moisture pathway patterns using the self-organizing map method. Results show that horizontal moisture pathway patterns and their occurrences were not evidently different between seasons. However, warm (summer and fall) and cold (winter and spring) seasons show considerable differences in the spreading of moisture sources in all nine regions, even though many sources do not frequently contribute to extreme precipitation events. In all four seasons, terrestrial evapotranspiration had provided major moisture sources to many extreme precipitation events occurred in inland regions. Central Canada had received more widespread moisture sources over surrounding oceans of North America than western and eastern Canada, because of more diverse moisture pathway patterns for central Canada that transport moisture from all surrounding oceans to central Canada. Extreme precipitation in southwestern Canada mainly resulted from atmospheric rivers over the North Pacific Ocean. For northwestern Canada, moisture pathway patterns were from the northern Pacific, Arctic and northern Atlantic oceans, even though more than 78% of trajectories for northwestern Canada were from the North Pacific. Westerlies from the North Pacific Ocean and northern polar jet streams controlled dominant pathways to central and eastern Canada. More extreme precipitation events over Canada were fed by the Arctic Ocean in warm than in cold seasons.

  7. Moisture sources and pathways associated with the spatial variability of seasonal extreme precipitation over Canada

    NASA Astrophysics Data System (ADS)

    Gan, T. Y. Y.; Tan, X.; Chen, Y. D.

    2017-12-01

    Nine regions with spatially coherent seasonal 3-day total precipitation extremes across Canada were identified using a clustering method that is compliant to the extreme value theory. Using storm back-trajectory analyses, we then identified possible moisture sources and pathways that are conducive to occurrences of seasonal extreme precipitation events in four seasons for the nine regions identified.Moisture pathways for all extreme precipitation events were clustered to nine dominant moisture pathway patterns using the self-organizing map method. Results show that horizontal moisture pathway patterns and their occurrences were not evidently different between seasons. However, warm (summer and fall) and cold (winter and spring) seasons show considerable differences in the spreading ofmoisture sources in all nine regions, even though many sources do not frequently contribute to extreme precipitation events. In all four seasons, terrestrial evapotranspiration had provided major moisture sources to many extreme precipitation events occurred in inland regions. Central Canada had received more widespread moisture sources over surrounding oceans of North America than western and eastern Canada, because of more diverse moisture pathway patterns for central Canada that transport moisture from all surrounding oceans to central Canada. Extreme precipitation in southwestern Canada mainly resulted from atmospheric rivers over the North Pacific Ocean. For northwestern Canada, moisture pathway patterns were from the northern Pacific, Arctic and northern Atlantic oceans, even though more than 78% of trajectories for northwestern Canada were from the North Pacific. Westerlies from the North Pacific Ocean and northern polar jet streams controlled dominant pathways to central and eastern Canada. More extreme precipitation events over Canada were fed by the Arctic Ocean in warm than in cold seasons.

  8. Structure and reactivity of ferrihydrite-soil organic carbon-calcium ternary complexes

    NASA Astrophysics Data System (ADS)

    Yang, Y.; Adhikari, D.; Sowers, T.; Stuckey, J.; Poulson, S.; Sparks, D. L.

    2017-12-01

    Complete understanding about the interactions between soil organic carbon (SOC) and minerals is important for predicting the stability of SOC and its response to climate change. Recent studies have shown the importance of calcium (Ca)-bearing minerals and iron (Fe) oxide in associating with and stabilizing SOC. In this study, we have investigated the formation and reactivity of ferrihydrite-SOC-Ca ternary complexes. During the co-precipitation of ferrihydrite with SOC in the presence of Ca2+, 60% of SOC can be co-precipitated with ferrihydrite at a C/Fe (molar ratio) of up to 10, whereas the Ca/Fe ratio was saturated at 0.2. Increasing amount of Ca2+ did not affect the co-precipitation of SOC with ferrihydrite or the lability of ferrihydrite-bound SOC. In addition, microbial reduction of ferrihydrite and reductive release of ferrihydrite-bound SOC were not influenced by the presence of Ca, but the pathway for Fe mineral transformation during the reduction was affected by Ca. In the meantime, Fe reduction selectively released carboxylic-enriched SOC. As a comparison, the presence of SOC increased the incorporation of Ca into the structure of ferrihydrite. Our results indicate the formation of ferrihydrite-SOC-Ca complexes, with organic carbon bridging the ferrihydrite and Ca. Such ternary complexes potentially play an important role in regulating the interactions between SOC and mineral phases in soil.

  9. Synoptic moisture pathways associated with mean and extreme precipitation over Canada for winter and spring

    NASA Astrophysics Data System (ADS)

    Tan, X.; Gan, T. Y. Y.; Chen, Y. D.

    2017-12-01

    Dominant synoptic moisture pathway patterns of vertically integrated water vapor transport (IVT) in winter and spring over Canada West and East were identified using the self-organizing map method. Large-scale meteorological patterns (LSMPs) were related to the variability in seasonal precipitation totals and occurrences of precipitation extremes. Changes in both occurrences of LSMPs and seasonal precipitation occurred under those LSMPs were evaluated to attribute observed changes in seasonal precipitation totals and occurrences of precipitation extremes. Effects of large-scale climate anomalies on occurrences of LSMPs were also examined. Results show that synoptic moisture pathways and LSMPs exhibit the propagation of jet streams as the location and direction of ridges and troughs, and the strength and center of pressure lows and highs varied considerably between LSMPs. Significant decreases in occurrences of synoptic moisture pathway patterns that are favorable with positive precipitation anomalies and more precipitation extremes in winter over Canada West resulted in decreases in seasonal precipitation and occurrences of precipitation extremes. LSMPs resulting in a hot and dry climate and less (more) frequent precipitation extremes over the Canadian Prairies in winter and northwestern Canada in spring are more likely to occur in years with a negative phase of PNA. Occurrences of LSMPs for a wet climate and frequent occurrences of extreme precipitation events over southeastern Canada are associated with a positive phase of NAO. In El Niño years or negative PDO years, LSMPs associated with a dry climate and less frequent precipitation extremes over western Canada tend to occur.

  10. Modelling removal mechanisms of Pb, Cu, Zn and Cd in acidic groundwater during the neutralization by ambient surface and ground waters

    USGS Publications Warehouse

    Paulson, Anthony J.; Balistrieri, Laurie S.

    1999-01-01

    Removal of Pb, Cu, Zn, and Cd during neutralization of acid rock drainage is examined using model simulations of field conditions and laboratory experiments involving mixing of natural drainage and surface waters or groundwaters. The simulations consider sorption onto hydrous Fe and Al oxides and particulate organic carbon, mineral precipitation, and organic and inorganic solution complexation of metals for two physical systems where newly formed oxides and particulate organic matter are either transported or retained along the chemical pathway. The calculations indicate that metal removal is a strong function of the physical system. Relative to direct discharge of ARD into streams, lower metal removals are observed where ARD enters streamwaters during the latter stages of neutralization by ambient groundwater after most of the Fe has precipitated and been retained in the soils. The mixing experiments, which represent the field simulations, also demonstrated the importance of dissolved metal to particle Fe ratios in controlling dissolved metal removal along the chemical pathway. Finally, model calculations indicate that hydrous Fe oxides and particulate organic carbon are more important than hydrous Al oxides in removing metals and that both inorganic and organic complexation must be considered when modeling metal removal from aquatic systems that are impacted by sulfide oxidation.

  11. Organic Matter Remineralization Predominates Phosphorus Cycling in the Mid-Bay Sediments in the Chesapeake Bay

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sunendra, Joshi R.; Kukkadapu, Ravi K.; Burdige, David J.

    2015-05-19

    The Chesapeake Bay, the largest and most productive estuary in the US, suffers from varying degrees of water quality issues fueled by both point and non–point source nutrient sources. Restoration of the bay is complicated by the multitude of nutrient sources, their variable inputs and hydrological conditions, and complex interacting factors including climate forcing. These complexities not only restrict formulation of effective restoration plans but also open up debates on accountability issues with nutrient loading. A detailed understanding of sediment phosphorus (P) dynamics enables one to identify the exchange of dissolved constituents across the sediment- water interface and aid tomore » better constrain mechanisms and processes controlling the coupling between the sediments and the overlying waters. Here we used phosphate oxygen isotope ratios (δ18Op) in concert with sediment chemistry, XRD, and Mössbauer spectroscopy on the sediment retrieved from an organic rich, sulfidic site in the meso-haline portion of the mid-bay to identify sources and pathway of sedimentary P cycling and to infer potential feedback effect on bottom water hypoxia and surface water eutrophication. Isotope data indicate that the regeneration of inorganic P from organic matter degradation (remineralization) is the predominant, if not sole, pathway for authigenic P precipitation in the mid-bay sediments. We interpret that the excess inorganic P generated by remineralization should have overwhelmed any bottom-water and/or pore-water P derived from other sources or biogeochemical processes and exceeded saturation with respect to authigenic P precipitation. It is the first research that identifies the predominance of remineralization pathway against remobilization (coupled Fe-P cycling) pathway in the Chesapeake Bay. Therefore, these results are expected to have significant implications for the current understanding of P cycling and benthic-pelagic coupling in the bay, particularly on the source and pathway of P that sustains hypoxia and supports phytoplankton growth in the surface water.« less

  12. Crystallization and preliminary crystallographic analysis of calcium-binding protein-2 from Entamoeba histolytica and its complexes with strontium and the IQ1 motif of myosin V

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gourinath, S., E-mail: sgourinath@mail.jnu.ac.in; Padhan, Narendra; Alam, Neelima

    2005-04-01

    Calcium-binding protein-2 (EhCaBP2) crystals were grown using MPD as a precipitant. EhCaBP2 also crystallized in complex with strontium (replacing calcium) at similar conditions. Preliminary data for EhCaBP2 crystals in complex with an IQ motif are also reported. Calcium plays a pivotal role in the pathogenesis of amoebiasis, a major disease caused by Entamoeba histolytica. Two domains with four canonical EF-hand-containing calcium-binding proteins (CaBPs) have been identified from E. histolytica. Even though they have very high sequence similarity, these bind to different target proteins in a Ca{sup 2+}-dependent manner, leading to different functional pathways. Calcium-binding protein-2 (EhCaBP2) crystals were grown usingmore » MPD as a precipitant. The crystals belong to space group P2{sub 1}, with unit-cell parameters a = 111.74, b = 68.83, c = 113.25 Å, β = 116.7°. EhCaBP2 also crystallized in complex with strontium (replacing calcium) at similar conditions. The crystals belong to space group P2{sub 1}, with unit-cell parameters a = 69.18, b = 112.03, c = 93.42 Å, β = 92.8°. Preliminary data for EhCaBP2 crystals in complex with an IQ motif are also reported. This complex was crystallized with MPD and ethanol as precipitating agents. These crystals belong to space group P2{sub 1}, with unit-cell parameters a = 60.5, b = 69.86, c = 86.5 Å, β = 97.9°.« less

  13. Controlled growth and form of precipitating microsculptures

    NASA Astrophysics Data System (ADS)

    Kaplan, C. Nadir; Noorduin, Wim L.; Li, Ling; Sadza, Roel; Folkertsma, Laura; Aizenberg, Joanna; Mahadevan, L.

    2017-03-01

    Controlled self-assembly of three-dimensional shapes holds great potential for fabrication of functional materials. Their practical realization requires a theoretical framework to quantify and guide the dynamic sculpting of the curved structures that often arise in accretive mineralization. Motivated by a variety of bioinspired coprecipitation patterns of carbonate and silica, we develop a geometrical theory for the kinetics of the growth front that leaves behind thin-walled complex structures. Our theory explains the range of previously observed experimental patterns and, in addition, predicts unexplored assembly pathways. This allows us to design a number of functional base shapes of optical microstructures, which we synthesize to demonstrate their light-guiding capabilities. Overall, our framework provides a way to understand and control the growth and form of functional precipitating microsculptures.

  14. Remote Sensing of Subsurface Microbial Transformations

    NASA Astrophysics Data System (ADS)

    Williams, K. H.; Ntarlagiannis, D.; Slater, L.; Long, P.; Dohnalkova, A.; Hubbard, S. S.; Banfield, J. F.

    2004-12-01

    Understanding how microorganisms influence the physical and chemical properties of the subsurface is hindered by our inability to detect microbial dynamics in real time with high spatial resolution. Here we have used non-invasive geophysical methods to monitor biomineralization and related processes during biostimulation at both laboratory and field scales. Alterations in saturated sediment characteristics resulting from microbe-mediated transformations were concomitant with changes in complex resistivity, spontaneous potential, and acoustic wave signatures. Variability in complex resistivity and acoustic wave amplitudes appears tied to the nucleation, growth, and development of nanoparticulate precipitates along grain surfaces and within the pore space. In contrast, time-varying spontaneous potentials appear primarily sensitive to the electrochemical gradients resulting from metabolic pathways, such as iron- and sulfate-reduction. Furthermore, they enable us to track mobile fronts of active respiration that arise due to microbial chemotaxis. In this way, geophysical data may be used to image the distribution of mineral precipitates, biomass, and biogeochemical fronts evolving over time and suggest the ability to remotely monitor contaminated aquifers undergoing bioremediation.

  15. Mineral solubilities in the Na-K-Mg-Ca-Cl-SO 4-H 2O system: a re-evaluation of the sulfate chemistry in the Spencer-Møller-Weare model

    NASA Astrophysics Data System (ADS)

    Marion, Giles M.; Farren, Ronald E.

    1999-05-01

    The Spencer-Møller-Weare (SMW) (1990) model is parameterized for the Na-K-Mg-Ca-Cl-SO 4-H 2O system over the temperature range from -60° to 25°C. This model is one of the few complex chemical equilibrium models for aqueous solutions parameterized for subzero temperatures. The primary focus of the SMW model parameterization and validation deals with chloride systems. There are problems with the sulfate parameterization of the SMW model, most notably with sodium sulfate and magnesium sulfate. The primary objective of this article is to re-estimate the Pitzer-equation parameters governing interactions among sodium, potassium, magnesium, and calcium with sulfate in the SMW model. A mathematical algorithm is developed to estimate 22 temperature-dependent Pitzer-equation parameters. The sodium sulfate reparameterization reduces the overall standard error (SE) from 0.393 with the SMW Pitzer-equation parameters to 0.155. Similarly, the magnesium sulfate reparameterization reduces the SE from 0.335 to 0.124. In addition to the sulfate reparameterization, five additional sulfate minerals are included in the model, which allows a more complete treatment of sulfate chemistry in the Na-K-Mg-Ca-Cl-SO 4-H 2O system. Application of the model to seawater evaporation predicts gypsum precipitation at a seawater concentration factor (SCF) of 3.37 and halite precipitation at an SCF of 10.56, which are in good agreement with previous experimental and theoretical estimates. Application of the model to seawater freezing helps explain the two pathways for seawater freezing. Along the thermodynamically stable "Gitterman pathway," calcium precipitates as gypsum and the seawater eutectic is -36.2°C. Along the metastable "Ringer-Nelson-Thompson pathway," calcium precipitates as antarcticite and the seawater eutectic is -53.8°C.

  16. Simulations of the future precipitation climate of the Central Andes using a coupled regional climate model

    NASA Astrophysics Data System (ADS)

    Nicholls, S.; Mohr, K. I.

    2014-12-01

    The meridional extent and complex orography of the South American continent contributes to a wide diversity of climate regimes ranging from hyper-arid deserts to tropical rainforests to sub-polar highland regions. Global climate models, although capable of resolving synoptic-scale South American climate features, are inadequate for fully-resolving the strong gradients between climate regimes and the complex orography which define the Tropical Andes given their low spatial and temporal resolution. Recent computational advances now make practical regional climate modeling with prognostic mesoscale atmosphere-ocean coupled models, such as the Coupled Ocean-Atmosphere-Wave-Sediment Transport (COAWST) modeling system, to climate research. Previous work has shown COAWST to reasonably simulate the both the entire 2003-2004 wet season (Dec-Feb) as validated against both satellite and model analysis data. More recently, COAWST simulations have also been shown to sensibly reproduce the entire annual cycle of rainfall (Oct 2003 - Oct 2004) with historical climate model input. Using future global climate model input for COAWST, the present work involves year-long cycle spanning October to October for the years 2031, 2059, and 2087 assuming the most likely regional climate pathway (RCP): RCP 6.0. COAWST output is used to investigate how global climate change impacts the spatial distribution, precipitation rates, and diurnal cycle of precipitation patterns in the Central Andes vary in these yearly "snapshots". Initial results show little change to precipitation coverage or its diurnal cycle, however precipitation amounts did tend drier over the Brazilian Plateau and wetter over the Western Amazon and Central Andes. These results suggest potential adjustments to large-scale climate features (such as the Bolivian High).

  17. Grain boundary engineering to control the discontinuous precipitation in multicomponent U10Mo alloy

    DOE PAGES

    Devaraj, Arun; Kovarik, Libor; Kautz, Elizabeth; ...

    2018-03-30

    Here, we demonstrate here that locally stabilized structure and compositional segregation at grain boundaries in a complex multicomponent alloy can be modified using high temperature homogenization treatment to influence the kinetics of phase transformations initiating from grain boundaries during subsequent low temperature annealing. Using aberration-corrected scanning transmission electron microscopy and atom probe tomography of a model multicomponent metallic alloy —uranium-10 wt% molybdenum (U-10Mo) a nuclear fuel, that is highly relevant to worldwide nuclear non-proliferation efforts, we demonstrate the ability to change the structure and compositional segregation at grain boundary, which then controls the subsequent discontinuous precipitation kinetics during sub-eutectoid annealing.more » A change in grain boundary from one characterized by segregation of Mo and impurities at grain boundary to a phase boundary with a distinct U 2MoSi 2C wetting phase precipitates introducing Ni and Al rich interphase complexions caused a pronounced reduction in area fraction of subsequent discontinuous precipitation. The broader implication of this work is in highlighting the role of grain boundary structure and composition in metallic alloys on dictating the fate of grain boundary initiated phase transformations like discontinuous precipitation or cellular transformation. This work highlights a new pathway to tune the grain boundary structure and composition to tailor the final microstructure of multicomponent metallic alloys.« less

  18. Grain boundary engineering to control the discontinuous precipitation in multicomponent U10Mo alloy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Devaraj, Arun; Kovarik, Libor; Kautz, Elizabeth

    Here, we demonstrate here that locally stabilized structure and compositional segregation at grain boundaries in a complex multicomponent alloy can be modified using high temperature homogenization treatment to influence the kinetics of phase transformations initiating from grain boundaries during subsequent low temperature annealing. Using aberration-corrected scanning transmission electron microscopy and atom probe tomography of a model multicomponent metallic alloy —uranium-10 wt% molybdenum (U-10Mo) a nuclear fuel, that is highly relevant to worldwide nuclear non-proliferation efforts, we demonstrate the ability to change the structure and compositional segregation at grain boundary, which then controls the subsequent discontinuous precipitation kinetics during sub-eutectoid annealing.more » A change in grain boundary from one characterized by segregation of Mo and impurities at grain boundary to a phase boundary with a distinct U 2MoSi 2C wetting phase precipitates introducing Ni and Al rich interphase complexions caused a pronounced reduction in area fraction of subsequent discontinuous precipitation. The broader implication of this work is in highlighting the role of grain boundary structure and composition in metallic alloys on dictating the fate of grain boundary initiated phase transformations like discontinuous precipitation or cellular transformation. This work highlights a new pathway to tune the grain boundary structure and composition to tailor the final microstructure of multicomponent metallic alloys.« less

  19. Iron Transformation Pathways and Redox Micro-Environments in Seafloor Sulfide-Mineral Deposits: Spatially Resolved Fe XAS and δ(57/54)Fe Observations.

    PubMed

    Toner, Brandy M; Rouxel, Olivier J; Santelli, Cara M; Bach, Wolfgang; Edwards, Katrina J

    2016-01-01

    Hydrothermal sulfide chimneys located along the global system of oceanic spreading centers are habitats for microbial life during active venting. Hydrothermally extinct, or inactive, sulfide deposits also host microbial communities at globally distributed sites. The main goal of this study is to describe Fe transformation pathways, through precipitation and oxidation-reduction (redox) reactions, and examine transformation products for signatures of biological activity using Fe mineralogy and stable isotope approaches. The study includes active and inactive sulfides from the East Pacific Rise 9°50'N vent field. First, the mineralogy of Fe(III)-bearing precipitates is investigated using microprobe X-ray absorption spectroscopy (μXAS) and X-ray diffraction (μXRD). Second, laser-ablation (LA) and micro-drilling (MD) are used to obtain spatially-resolved Fe stable isotope analysis by multicollector-inductively coupled plasma-mass spectrometry (MC-ICP-MS). Eight Fe-bearing minerals representing three mineralogical classes are present in the samples: oxyhydroxides, secondary phyllosilicates, and sulfides. For Fe oxyhydroxides within chimney walls and layers of Si-rich material, enrichments in both heavy and light Fe isotopes relative to pyrite are observed, yielding a range of δ(57)Fe values up to 6‰. Overall, several pathways for Fe transformation are observed. Pathway 1 is characterized by precipitation of primary sulfide minerals from Fe(II)aq-rich fluids in zones of mixing between vent fluids and seawater. Pathway 2 is also consistent with zones of mixing but involves precipitation of sulfide minerals from Fe(II)aq generated by Fe(III) reduction. Pathway 3 is direct oxidation of Fe(II) aq from hydrothermal fluids to form Fe(III) precipitates. Finally, Pathway 4 involves oxidative alteration of pre-existing sulfide minerals to form Fe(III). The Fe mineralogy and isotope data do not support or refute a unique biological role in sulfide alteration. The findings reveal a dynamic range of Fe transformation pathways consistent with a continuum of micro-environments having variable redox conditions. These micro-environments likely support redox cycling of Fe and S and are consistent with culture-dependent and -independent assessments of microbial physiology and genetic diversity of hydrothermal sulfide deposits.

  20. What controls the stable isotope composition of precipitation in the Mekong Delta? A model-based statistical approach

    NASA Astrophysics Data System (ADS)

    Le Duy, Nguyen; Heidbüchel, Ingo; Meyer, Hanno; Merz, Bruno; Apel, Heiko

    2018-02-01

    This study analyzes the influence of local and regional climatic factors on the stable isotopic composition of rainfall in the Vietnamese Mekong Delta (VMD) as part of the Asian monsoon region. It is based on 1.5 years of weekly rainfall samples. In the first step, the isotopic composition of the samples is analyzed by local meteoric water lines (LMWLs) and single-factor linear correlations. Additionally, the contribution of several regional and local factors is quantified by multiple linear regression (MLR) of all possible factor combinations and by relative importance analysis. This approach is novel for the interpretation of isotopic records and enables an objective quantification of the explained variance in isotopic records for individual factors. In this study, the local factors are extracted from local climate records, while the regional factors are derived from atmospheric backward trajectories of water particles. The regional factors, i.e., precipitation, temperature, relative humidity and the length of backward trajectories, are combined with equivalent local climatic parameters to explain the response variables δ18O, δ2H, and d-excess of precipitation at the station of measurement. The results indicate that (i) MLR can better explain the isotopic variation in precipitation (R2 = 0.8) compared to single-factor linear regression (R2 = 0.3); (ii) the isotopic variation in precipitation is controlled dominantly by regional moisture regimes (˜ 70 %) compared to local climatic conditions (˜ 30 %); (iii) the most important climatic parameter during the rainy season is the precipitation amount along the trajectories of air mass movement; (iv) the influence of local precipitation amount and temperature is not significant during the rainy season, unlike the regional precipitation amount effect; (v) secondary fractionation processes (e.g., sub-cloud evaporation) can be identified through the d-excess and take place mainly in the dry season, either locally for δ18O and δ2H, or along the air mass trajectories for d-excess. The analysis shows that regional and local factors vary in importance over the seasons and that the source regions and transport pathways, and particularly the climatic conditions along the pathways, have a large influence on the isotopic composition of rainfall. Although the general results have been reported qualitatively in previous studies (proving the validity of the approach), the proposed method provides quantitative estimates of the controlling factors, both for the whole data set and for distinct seasons. Therefore, it is argued that the approach constitutes an advancement in the statistical analysis of isotopic records in rainfall that can supplement or precede more complex studies utilizing atmospheric models. Due to its relative simplicity, the method can be easily transferred to other regions, or extended with other factors. The results illustrate that the interpretation of the isotopic composition of precipitation as a recorder of local climatic conditions, as for example performed for paleorecords of water isotopes, may not be adequate in the southern part of the Indochinese Peninsula, and likely neither in other regions affected by monsoon processes. However, the presented approach could open a pathway towards better and seasonally differentiated reconstruction of paleoclimates based on isotopic records.

  1. Assessment of CORDEX-South Asia experiments for monsoonal precipitation over Himalayan region for future climate

    NASA Astrophysics Data System (ADS)

    Choudhary, A.; Dimri, A. P.

    2018-04-01

    Precipitation is one of the important climatic indicators in the global climate system. Probable changes in monsoonal (June, July, August and September; hereafter JJAS) mean precipitation in the Himalayan region for three different greenhouse gas emission scenarios (i.e. representative concentration pathways or RCPs) and two future time slices (near and far) are estimated from a set of regional climate simulations performed under Coordinated Regional Climate Downscaling Experiment-South Asia (CORDEX-SA) project. For each of the CORDEX-SA simulations and their ensemble, projections of near future (2020-2049) and far future (2070-2099) precipitation climatology with respect to corresponding present climate (1970-2005) over Himalayan region are presented. The variability existing over each of the future time slices is compared with the present climate variability to determine the future changes in inter annual fluctuations of monsoonal mean precipitation. The long-term (1970-2099) trend (mm/day/year) of monsoonal mean precipitation spatially distributed as well as averaged over Himalayan region is analyzed to detect any change across twenty-first century as well as to assess model uncertainty in simulating the precipitation changes over this period. The altitudinal distribution of difference in trend of future precipitation from present climate existing over each of the time slices is also studied to understand any elevation dependency of change in precipitation pattern. Except for a part of the Hindu-Kush area in western Himalayan region which shows drier condition, the CORDEX-SA experiments project in general wetter/drier conditions in near future for western/eastern Himalayan region, a scenario which gets further intensified in far future. Although, a gradually increasing precipitation trend is seen throughout the twenty-first century in carbon intensive scenarios, the distribution of trend with elevation presents a very complex picture with lower elevations showing a greater trend in far-future under RCP8.5 when compared with higher elevations.

  2. An application of sample entropy to precipitation in Paraíba State, Brazil

    NASA Astrophysics Data System (ADS)

    Xavier, Sílvio Fernando Alves; da Silva Jale, Jader; Stosic, Tatijana; dos Santos, Carlos Antonio Costa; Singh, Vijay P.

    2018-05-01

    A climate system is characterized to be a complex non-linear system. In order to describe the complex characteristics of precipitation series in Paraíba State, Brazil, we aim the use of sample entropy, a kind of entropy-based algorithm, to evaluate the complexity of precipitation series. Sixty-nine meteorological stations are distributed over four macroregions: Zona da Mata, Agreste, Borborema, and Sertão. The results of the analysis show that intricacies of monthly average precipitation have differences in the macroregions. Sample entropy is able to reflect the dynamic change of precipitation series providing a new way to investigate complexity of hydrological series. The complexity exhibits areal variation of local water resource systems which can influence the basis for utilizing and developing resources in dry areas.

  3. Ubiquitin proteasome pathway-mediated degradation of proteins: effects due to site-specific substrate deamidation

    USDA-ARS?s Scientific Manuscript database

    The accumulation, aggregation, and precipitation of proteins are etiologic for age-related diseases, particularly cataract, because the precipitates cloud the lens. Deamidation of crystallins is associated with protein precipitation, aging, and cataract. Among the roles of the ubiquitin proteasome p...

  4. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Toner, Brandy M.; Rouxel, Olivier J.; Santelli, Cara M.

    Hydrothermal sulfide chimneys located along the global system of oceanic spreading centers are habitats for microbial life during active venting. Hydrothermally extinct, or inactive, sulfide deposits also host microbial communities at globally distributed sites. The main goal of this study is to describe Fe transformation pathways, through precipitation and oxidation-reduction (redox) reactions, and examine transformation products for signatures of biological activity using Fe mineralogy and stable isotope approaches. The study includes active and inactive sulfides from the East Pacific Rise 9°50'N vent field. First, the mineralogy of Fe(III)-bearing precipitates is investigated using microprobe X-ray absorption spectroscopy (μXAS) and X-ray diffractionmore » (μXRD). Second, laser-ablation (LA) and micro-drilling (MD) are used to obtain spatially-resolved Fe stable isotope analysis by multicollector-inductively coupled plasma-mass spectrometry (MC-ICP-MS). Eight Fe-bearing minerals representing three mineralogical classes are present in the samples: oxyhydroxides, secondary phyllosilicates, and sulfides. For Fe oxyhydroxides within chimney walls and layers of Si-rich material, enrichments in both heavy and light Fe isotopes relative to pyrite are observed, yielding a range of δ 57Fe values up to 6‰. Overall, several pathways for Fe transformation are observed. Pathway 1 is characterized by precipitation of primary sulfide minerals from Fe(II)aq-rich fluids in zones of mixing between vent fluids and seawater. Pathway 2 is also consistent with zones of mixing but involves precipitation of sulfide minerals from Fe(II)aq generated by Fe(III) reduction. Pathway 3 is direct oxidation of Fe(II) aq from hydrothermal fluids to form Fe(III) precipitates. Finally, Pathway 4 involves oxidative alteration of pre-existing sulfide minerals to form Fe(III). The Fe mineralogy and isotope data do not support or refute a unique biological role in sulfide alteration. The findings reveal a dynamic range of Fe transformation pathways consistent with a continuum of micro-environments having variable redox conditions. Lastly, these micro-environments likely support redox cycling of Fe and S and are consistent with culture-dependent and -independent assessments of microbial physiology and genetic diversity of hydrothermal sulfide deposits.« less

  5. Modelling the evolution of complex conductivity during calcite precipitation on glass beads

    NASA Astrophysics Data System (ADS)

    Leroy, Philippe; Li, Shuai; Jougnot, Damien; Revil, André; Wu, Yuxin

    2017-04-01

    When pH and alkalinity increase, calcite frequently precipitates and hence modifies the petrophysical properties of porous media. The complex conductivity method can be used to directly monitor calcite precipitation in porous media because it is sensitive to the evolution of the mineralogy, pore structure and its connectivity. We have developed a mechanistic grain polarization model considering the electrochemical polarization of the Stern and diffuse layers surrounding calcite particles. Our complex conductivity model depends on the surface charge density of the Stern layer and on the electrical potential at the onset of the diffuse layer, which are computed using a basic Stern model of the calcite/water interface. The complex conductivity measurements of Wu et al. on a column packed with glass beads where calcite precipitation occurs are reproduced by our surface complexation and complex conductivity models. The evolution of the size and shape of calcite particles during the calcite precipitation experiment is estimated by our complex conductivity model. At the early stage of the calcite precipitation experiment, modelled particles sizes increase and calcite particles flatten with time because calcite crystals nucleate at the surface of glass beads and grow into larger calcite grains. At the later stage of the calcite precipitation experiment, modelled sizes and cementation exponents of calcite particles decrease with time because large calcite grains aggregate over multiple glass beads and only small calcite crystals polarize.

  6. Iron Transformation Pathways and Redox Micro-Environments in Seafloor Sulfide-Mineral Deposits: Spatially Resolved Fe XAS and δ57/54Fe Observations

    PubMed Central

    Toner, Brandy M.; Rouxel, Olivier J.; Santelli, Cara M.; Bach, Wolfgang; Edwards, Katrina J.

    2016-01-01

    Hydrothermal sulfide chimneys located along the global system of oceanic spreading centers are habitats for microbial life during active venting. Hydrothermally extinct, or inactive, sulfide deposits also host microbial communities at globally distributed sites. The main goal of this study is to describe Fe transformation pathways, through precipitation and oxidation-reduction (redox) reactions, and examine transformation products for signatures of biological activity using Fe mineralogy and stable isotope approaches. The study includes active and inactive sulfides from the East Pacific Rise 9°50′N vent field. First, the mineralogy of Fe(III)-bearing precipitates is investigated using microprobe X-ray absorption spectroscopy (μXAS) and X-ray diffraction (μXRD). Second, laser-ablation (LA) and micro-drilling (MD) are used to obtain spatially-resolved Fe stable isotope analysis by multicollector-inductively coupled plasma-mass spectrometry (MC-ICP-MS). Eight Fe-bearing minerals representing three mineralogical classes are present in the samples: oxyhydroxides, secondary phyllosilicates, and sulfides. For Fe oxyhydroxides within chimney walls and layers of Si-rich material, enrichments in both heavy and light Fe isotopes relative to pyrite are observed, yielding a range of δ57Fe values up to 6‰. Overall, several pathways for Fe transformation are observed. Pathway 1 is characterized by precipitation of primary sulfide minerals from Fe(II)aq-rich fluids in zones of mixing between vent fluids and seawater. Pathway 2 is also consistent with zones of mixing but involves precipitation of sulfide minerals from Fe(II)aq generated by Fe(III) reduction. Pathway 3 is direct oxidation of Fe(II) aq from hydrothermal fluids to form Fe(III) precipitates. Finally, Pathway 4 involves oxidative alteration of pre-existing sulfide minerals to form Fe(III). The Fe mineralogy and isotope data do not support or refute a unique biological role in sulfide alteration. The findings reveal a dynamic range of Fe transformation pathways consistent with a continuum of micro-environments having variable redox conditions. These micro-environments likely support redox cycling of Fe and S and are consistent with culture-dependent and -independent assessments of microbial physiology and genetic diversity of hydrothermal sulfide deposits. PMID:27242685

  7. Iron transformation pathways and redox micro-environments in seafloor sulfide-mineral deposits: Spatially resolved Fe XAS and δ 57/54Fe observations

    DOE PAGES

    Toner, Brandy M.; Rouxel, Olivier J.; Santelli, Cara M.; ...

    2016-05-10

    Hydrothermal sulfide chimneys located along the global system of oceanic spreading centers are habitats for microbial life during active venting. Hydrothermally extinct, or inactive, sulfide deposits also host microbial communities at globally distributed sites. The main goal of this study is to describe Fe transformation pathways, through precipitation and oxidation-reduction (redox) reactions, and examine transformation products for signatures of biological activity using Fe mineralogy and stable isotope approaches. The study includes active and inactive sulfides from the East Pacific Rise 9°50'N vent field. First, the mineralogy of Fe(III)-bearing precipitates is investigated using microprobe X-ray absorption spectroscopy (μXAS) and X-ray diffractionmore » (μXRD). Second, laser-ablation (LA) and micro-drilling (MD) are used to obtain spatially-resolved Fe stable isotope analysis by multicollector-inductively coupled plasma-mass spectrometry (MC-ICP-MS). Eight Fe-bearing minerals representing three mineralogical classes are present in the samples: oxyhydroxides, secondary phyllosilicates, and sulfides. For Fe oxyhydroxides within chimney walls and layers of Si-rich material, enrichments in both heavy and light Fe isotopes relative to pyrite are observed, yielding a range of δ 57Fe values up to 6‰. Overall, several pathways for Fe transformation are observed. Pathway 1 is characterized by precipitation of primary sulfide minerals from Fe(II)aq-rich fluids in zones of mixing between vent fluids and seawater. Pathway 2 is also consistent with zones of mixing but involves precipitation of sulfide minerals from Fe(II)aq generated by Fe(III) reduction. Pathway 3 is direct oxidation of Fe(II) aq from hydrothermal fluids to form Fe(III) precipitates. Finally, Pathway 4 involves oxidative alteration of pre-existing sulfide minerals to form Fe(III). The Fe mineralogy and isotope data do not support or refute a unique biological role in sulfide alteration. The findings reveal a dynamic range of Fe transformation pathways consistent with a continuum of micro-environments having variable redox conditions. Lastly, these micro-environments likely support redox cycling of Fe and S and are consistent with culture-dependent and -independent assessments of microbial physiology and genetic diversity of hydrothermal sulfide deposits.« less

  8. Microbial and diagenetic steps leading to the mineralisation of Great Salt Lake microbialites

    NASA Astrophysics Data System (ADS)

    Pace, Aurélie; Bourillot, Raphaël; Bouton, Anthony; Vennin, Emmanuelle; Galaup, Serge; Bundeleva, Irina; Patrier, Patricia; Dupraz, Christophe; Thomazo, Christophe; Sansjofre, Pierre; Yokoyama, Yusuke; Franceschi, Michel; Anguy, Yannick; Pigot, Léa; Virgone, Aurélien; Visscher, Pieter T.

    2016-08-01

    Microbialites are widespread in modern and fossil hypersaline environments, where they provide a unique sedimentary archive. Authigenic mineral precipitation in modern microbialites results from a complex interplay between microbial metabolisms, organic matrices and environmental parameters. Here, we combined mineralogical and microscopic analyses with measurements of metabolic activity in order to characterise the mineralisation of microbial mats forming microbialites in the Great Salt Lake (Utah, USA). Our results show that the mineralisation process takes place in three steps progressing along geochemical gradients produced through microbial activity. First, a poorly crystallized Mg-Si phase precipitates on alveolar extracellular organic matrix due to a rise of the pH in the zone of active oxygenic photosynthesis. Second, aragonite patches nucleate in close proximity to sulfate reduction hotspots, as a result of the degradation of cyanobacteria and extracellular organic matrix mediated by, among others, sulfate reducing bacteria. A final step consists of partial replacement of aragonite by dolomite, possibly in neutral to slightly acidic porewater. This might occur due to dissolution-precipitation reactions when the most recalcitrant part of the organic matrix is degraded. The mineralisation pathways proposed here provide pivotal insight for the interpretation of microbial processes in past hypersaline environments.

  9. CMIP5 model simulations of Ethiopian Kiremt-season precipitation: current climate and future changes

    NASA Astrophysics Data System (ADS)

    Li, Laifang; Li, Wenhong; Ballard, Tristan; Sun, Ge; Jeuland, Marc

    2016-05-01

    Kiremt-season (June-September) precipitation provides a significant water supply for Ethiopia, particularly in the central and northern regions. The response of Kiremt-season precipitation to climate change is thus of great concern to water resource managers. However, the complex processes that control Kiremt-season precipitation challenge the capability of general circulation models (GCMs) to accurately simulate precipitation amount and variability. This in turn raises questions about their utility for predicting future changes. This study assesses the impact of climate change on Kiremt-season precipitation using state-of-the-art GCMs participating in the Coupled Model Intercomparison Project Phase 5. Compared to models with a coarse resolution, high-resolution models (horizontal resolution <2°) can more accurately simulate precipitation, most likely due to their ability to capture precipitation induced by topography. Under the Representative Concentration Pathway (RCP) 4.5 scenario, these high-resolution models project an increase in precipitation over central Highlands and northern Great Rift Valley in Ethiopia, but a decrease in precipitation over the southern part of the country. Such a dipole pattern is attributable to the intensification of the North Atlantic subtropical high (NASH) in a warmer climate, which influences Ethiopian Kiremt-season precipitation mainly by modulating atmospheric vertical motion. Diagnosis of the omega equation demonstrates that an intensified NASH increases (decreases) the advection of warm air and positive vorticity into the central Highlands and northern Great Rift Valley (southern part of the country), enhancing upward motion over the northern Rift Valley but decreasing elsewhere. Under the RCP 4.5 scenario, the high-resolution models project an intensification of the NASH by 15 (3 × 105 m2 s-2) geopotential meters (stream function) at the 850-hPa level, contributing to the projected precipitation change over Ethiopia. The influence of the NASH on Kiremt-season precipitation becomes more evident in the future due to the offsetting effects of two other major circulation systems: the East African Low-level Jet (EALLJ) and the Tropical Easterly Jet (TEJ). The high-resolution models project a strengthening of the EALLJ, but a weakening of the TEJ. Future changes in the EALLJ and TEJ will drive this precipitation system in opposite directions, leading to small or no net changes in precipitation in Ethiopia.

  10. Hydrochemical evolution of regional groundwaters to playa brines in central Australia

    NASA Astrophysics Data System (ADS)

    Jankowski, J.; Jacobson, G.

    A large-scale groundwater system in central Australia discharges to a chain of playas. Recharge in calcrete and fractured rock aquifers gives rise to relatively low-salinity HCO 3 Cl SO 4 groundwaters, which evolve through regional saline groundwaters, to highly saline playa brines. The hydrochemical evolution of the groundwaters follows the anionic sequence HCO 3 Cl SO 4 → ClbHCO 3SO 4 → ClSO 4HCO 3 → ClSO 4 → Cl. With increasing salinity, there is a relative increase in Na, K, Mg, Cl and SO 4; however, there is a relative decrease in HCO 3, Ca, and SiO 2 owing to the precipitation of carbonate, sulphate and silicate minerals, and the resultant brines are depleted in these ions. Significant chemical variation in the composition of playa brines is a result of complex processes of solution, evaporative concentration, precipitation and mineralogical change, including dolomitisation. Thermodynamic calculations based on the Pitzer equations have enabled a general model to be developed for these evolutionary processes in saline groundwaters up to the stage of halite saturation. At an early stage the regional groundwaters are saturated with respect to the carbonate minerals, dolomite first, then calcite. With increasing salinity, sulphate minerals begin to precipitate: saturation with respect to gypsum is attained at a chlorinity of 19‰, and saturation with respect to anhydrite is attained at 122‰. The playa brines attain saturation with respect to halite at a chlorinity of 144‰. Solute budgets based on a chloride concentration factor show that final playa brines are 178 times more concentrated than recharge groundwaters, and confirm the virtually complete loss of HCO 3, Ca and SiO 2 through precipitation. There are subtle differences in the hydrochemistry of different central Australian playa brines and also vis-à-vis playa brines described from other parts of the world. Most Australian playas have brines of the ClNa type with SO 4 and Mg also important. The generally accepted Hardie-Eugster model for brine evolution and mineral precipitation sequences has therefore been modified and extended. Three pathways are defined, following calcite precipitation, on the basis of the ratio of molar Ca to alkalinity; these pathways lead to saline waters with different compositions. Subsequent evolution of the brines depends on the ratios between molar SO 4, Mg, Ca and alkalinity.

  11. Multifractal Detrended Fluctuation Analysis of Regional Precipitation Sequences Based on the CEEMDAN-WPT

    NASA Astrophysics Data System (ADS)

    Liu, Dong; Cheng, Chen; Fu, Qiang; Liu, Chunlei; Li, Mo; Faiz, Muhammad Abrar; Li, Tianxiao; Khan, Muhammad Imran; Cui, Song

    2018-03-01

    In this paper, the complete ensemble empirical mode decomposition with the adaptive noise (CEEMDAN) algorithm is introduced into the complexity research of precipitation systems to improve the traditional complexity measure method specific to the mode mixing of the Empirical Mode Decomposition (EMD) and incomplete decomposition of the ensemble empirical mode decomposition (EEMD). We combined the CEEMDAN with the wavelet packet transform (WPT) and multifractal detrended fluctuation analysis (MF-DFA) to create the CEEMDAN-WPT-MFDFA, and used it to measure the complexity of the monthly precipitation sequence of 12 sub-regions in Harbin, Heilongjiang Province, China. The results show that there are significant differences in the monthly precipitation complexity of each sub-region in Harbin. The complexity of the northwest area of Harbin is the lowest and its predictability is the best. The complexity and predictability of the middle and Midwest areas of Harbin are about average. The complexity of the southeast area of Harbin is higher than that of the northwest, middle, and Midwest areas of Harbin and its predictability is worse. The complexity of Shuangcheng is the highest and its predictability is the worst of all the studied sub-regions. We used terrain and human activity as factors to analyze the causes of the complexity of the local precipitation. The results showed that the correlations between the precipitation complexity and terrain are obvious, and the correlations between the precipitation complexity and human influence factors vary. The distribution of the precipitation complexity in this area may be generated by the superposition effect of human activities and natural factors such as terrain, general atmospheric circulation, land and sea location, and ocean currents. To evaluate the stability of the algorithm, the CEEMDAN-WPT-MFDFA was compared with the equal probability coarse graining LZC algorithm, fuzzy entropy, and wavelet entropy. The results show that the CEEMDAN-WPT-MFDFA was more stable than 3 contrast methods under the influence of white noise and colored noise, which proves that the CEEMDAN-WPT-MFDFA has a strong robustness under the influence of noise.

  12. Fungi, bacteria and soil pH: the oxalate-carbonate pathway as a model for metabolic interaction.

    PubMed

    Martin, Gaëtan; Guggiari, Matteo; Bravo, Daniel; Zopfi, Jakob; Cailleau, Guillaume; Aragno, Michel; Job, Daniel; Verrecchia, Eric; Junier, Pilar

    2012-11-01

    The oxalate-carbonate pathway involves the oxidation of calcium oxalate to low-magnesium calcite and represents a potential long-term terrestrial sink for atmospheric CO(2). In this pathway, bacterial oxalate degradation is associated with a strong local alkalinization and subsequent carbonate precipitation. In order to test whether this process occurs in soil, the role of bacteria, fungi and calcium oxalate amendments was studied using microcosms. In a model system with sterile soil amended with laboratory cultures of oxalotrophic bacteria and fungi, the addition of calcium oxalate induced a distinct pH shift and led to the final precipitation of calcite. However, the simultaneous presence of bacteria and fungi was essential to drive this pH shift. Growth of both oxalotrophic bacteria and fungi was confirmed by qPCR on the frc (oxalotrophic bacteria) and 16S rRNA genes, and the quantification of ergosterol (active fungal biomass) respectively. The experiment was replicated in microcosms with non-sterilized soil. In this case, the bacterial and fungal contribution to oxalate degradation was evaluated by treatments with specific biocides (cycloheximide and bronopol). Results showed that the autochthonous microflora oxidized calcium oxalate and induced a significant soil alkalinization. Moreover, data confirmed the results from the model soil showing that bacteria are essentially responsible for the pH shift, but require the presence of fungi for their oxalotrophic activity. The combined results highlight that the interaction between bacteria and fungi is essential to drive metabolic processes in complex environments such as soil. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.

  13. Characterization of Steroid Receptor RNA Activator Protein Function in Modulating the Estrogen Signaling Pathway

    DTIC Science & Technology

    2007-05-01

    Signaling Pathway 5b. GRANT NUMBER W81XWH-05-1-0245 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) 5d. PROJECT NUMBER Yi Yan 5e. TASK NUMBER...negative control to identify proteins non-specifically precipitated. Tandem mass spectrometric analysis of immunoprecipitated samples identified a...immunoprecipitated sample and negative control. It is important to note that, SRAP was present among the remaining specifically precipitated 87 proteins. Using the

  14. Competing retention pathways of uranium upon reaction with Fe(II)

    NASA Astrophysics Data System (ADS)

    Massey, Michael S.; Lezama-Pacheco, Juan S.; Jones, Morris E.; Ilton, Eugene S.; Cerrato, José M.; Bargar, John R.; Fendorf, Scott

    2014-10-01

    Biogeochemical retention processes, including adsorption, reductive precipitation, and incorporation into host minerals, are important in contaminant transport, remediation, and geologic deposition of uranium. Recent work has shown that U can become incorporated into iron (hydr)oxide minerals, with a key pathway arising from Fe(II)-induced transformation of ferrihydrite, (Fe(OH)3·nH2O) to goethite (α-FeO(OH)); this is a possible U retention mechanism in soils and sediments. Several key questions, however, remain unanswered regarding U incorporation into iron (hydr)oxides and this pathway's contribution to U retention, including: (i) the competitiveness of U incorporation versus reduction to U(IV) and subsequent precipitation of UO2; (ii) the oxidation state of incorporated U; (iii) the effects of uranyl aqueous speciation on U incorporation; and, (iv) the mechanism of U incorporation. Here we use a series of batch reactions conducted at pH ∼7, [U(VI)] from 1 to 170 μM, [Fe(II)] from 0 to 3 mM, and [Ca] at 0 or 4 mM coupled with spectroscopic examination of reaction products of Fe(II)-induced ferrihydrite transformation to address these outstanding questions. Uranium retention pathways were identified and quantified using extended X-ray absorption fine structure (EXAFS) spectroscopy, X-ray powder diffraction, X-ray photoelectron spectroscopy, and transmission electron microscopy. Analysis of EXAFS spectra showed that 14-89% of total U was incorporated into goethite, upon reaction with Fe(II) and ferrihydrite. Uranium incorporation was a particularly dominant retention pathway at U concentrations ⩽50 μM when either uranyl-carbonato or calcium-uranyl-carbonato complexes were dominant, accounting for 64-89% of total U. With increasing U(VI) and Fe(II) concentrations, U(VI) reduction to U(IV) became more prevalent, but U incorporation remained a functioning retention pathway. These findings highlight the potential importance of U(V) incorporation within iron oxides as a retention process of U across a wide range of biogeochemical environments and the sensitivity of uranium retention processes to operative (bio)geochemical conditions.

  15. Evaluation of climatic changes in South-Asia

    NASA Astrophysics Data System (ADS)

    Kjellstrom, Erik; Rana, Arun; Grigory, Nikulin; Renate, Wilcke; Hansson, Ulf; Kolax, Michael

    2016-04-01

    Literature has sufficient evidences of climate change impact all over the world and its impact on various sectors. In light of new advancements made in climate modeling, availability of several climate downscaling approaches, the more robust bias correction methods with varying complexities and strengths, in the present study we performed a systematic evaluation of climate change impact over South-Asia region. We have used different Regional Climate Models (RCMs) (from CORDEX domain), (Global Climate Models GCMs) and gridded observations for the study area to evaluate the models in historical/control period (1980-2010) and changes in future period (2010-2099). Firstly, GCMs and RCMs are evaluated against the Gridded observational datasets in the area using precipitation and temperature as indicative variables. Observational dataset are also evaluated against the reliable set of observational dataset, as pointed in literature. Bias, Correlation, and changes (among other statistical measures) are calculated for the entire region and both the variables. Eventually, the region was sub-divided into various smaller domains based on homogenous precipitation zones to evaluate the average changes over time period. Spatial and temporal changes for the region are then finally calculated to evaluate the future changes in the region. Future changes are calculated for 2 Representative Concentration Pathways (RCPs), the middle emission (RCP4.5) and high emission (RCP8.5) and for both climatic variables, precipitation and temperature. Lastly, Evaluation of Extremes is performed based on precipitation and temperature based indices for whole region in future dataset. Results have indicated that the whole study region is under extreme stress in future climate scenarios for both climatic variables i.e. precipitation and temperature. Precipitation variability is dependent on the location in the area leading to droughts and floods in various regions in future. Temperature is hinting towards a constant increase throughout the region regardless of location.

  16. Holocene precipitation in the coastal temperate rainforest complex of southern British Columbia, Canada

    NASA Astrophysics Data System (ADS)

    Brown, K. J.; Fitton, R. J.; Schoups, G.; Allen, G. B.; Wahl, K. A.; Hebda, R. J.

    2006-11-01

    Pollen data from 69 surface samples from Vancouver Island, Canada, were used to develop a ratio index of precipitation, Douglas fir-western hemlock index (DWHI). DWHI ratios were combined with interpolated estimates of mean annual precipitation to develop pollen-based precipitation transfer functions. The optimal regression model, with a predictive range of 960-2600 mm, was applied to 10 Holocene lake sediment records distributed across a ˜150 km long coastal-inland precipitation gradient. Predicted precipitation was spatially modelled in a geographic information system to examine the spatio-temporal history of precipitation from this representative portion of the coastal temperate rainforest (CTR) complex of western North America. The reconstructions show widespread early Holocene dry conditions coupled with a steep east-west precipitation gradient. Thereafter, the modern precipitation gradient established 7000 years ago, illustrating that the CTR complex has experienced marked short-distance east-west changes in precipitation in the past. Changes in the abundance of arboreal and non-arboreal vegetation, as well as fire disturbance, are often concomitant with changes in Holocene precipitation. Given the precipitation and vegetation history of the region, conservation initiatives should focus on the moist outer coastal zone since it appears to have the greatest amount of resilience to perturbations in precipitation, whereas monitoring programs for signs of climate change should be initiated in central and eastern areas as they appear sensitive to changes in the moisture regime.

  17. Assessment of the impact of climate shifts on malaria transmission in the Sahel.

    PubMed

    Bomblies, Arne; Eltahir, Elfatih A B

    2009-09-01

    Climate affects malaria transmission through a complex network of causative pathways. We seek to evaluate the impact of hypothetical climate change scenarios on malaria transmission in the Sahel by using a novel mechanistic, high spatial- and temporal-resolution coupled hydrology and agent-based entomology model. The hydrology model component resolves individual precipitation events and individual breeding pools. The impact of future potential climate shifts on the representative Sahel village of Banizoumbou, Niger, is estimated by forcing the model of Banizoumbou environment with meteorological data from two locations along the north-south climatological gradient observed in the Sahel--both for warmer, drier scenarios from the north and cooler, wetter scenarios from the south. These shifts in climate represent hypothetical but historically realistic climate change scenarios. For Banizoumbou climatic conditions (latitude 13.54 N), a shift toward cooler, wetter conditions may dramatically increase mosquito abundance; however, our modeling results indicate that the increased malaria transmissibility is not simply proportional to the precipitation increase. The cooler, wetter conditions increase the length of the sporogonic cycle, dampening a large vectorial capacity increase otherwise brought about by increased mosquito survival and greater overall abundance. Furthermore, simulations varying rainfall event frequency demonstrate the importance of precipitation patterns, rather than simply average or time-integrated precipitation, as a controlling factor of these dynamics. Modeling results suggest that in addition to changes in temperature and total precipitation, changes in rainfall patterns are very important to predict changes in disease susceptibility resulting from climate shifts. The combined effect of these climate-shift-induced perturbations can be represented with the aid of a detailed mechanistic model.

  18. Effects of Solute Concentrations on Kinetic Pathways in Ni-Al-Cr Alloys

    NASA Technical Reports Server (NTRS)

    Booth-Morrison, Christopher; Weninger, Jessica; Sudbrack, Chantal K.; Mao, Zugang; Seidman, David N.; Noebe, Ronald D.

    2008-01-01

    The kinetic pathways resulting from the formation of coherent gamma'-precipitates from the gamma-matrix are studied for two Ni-Al-Cr alloys with similar gamma'-precipitate volume fractions at 873 K. The details of the phase decompositions of Ni-7.5Al-8.5Cr at.% and Ni-5.2Al-14.2Cr at.% for aging times from 1/6 to 1024 h are investigated by atom-probe tomography, and are found to differ significantly from a mean-field description of coarsening. The morphologies of the gamma'-precipitates of the alloys are similar, though the degrees of gamma'-precipitate coagulation and coalescence differ. Quantification within the framework of classical nucleation theory reveals that differences in the chemical driving forces for phase decomposition result in differences in the nucleation behavior of the two alloys. The temporal evolution of the gamma'-precipitate average radii and the gamma-matrix supersaturations follow the predictions of classical coarsening models. The compositional trajectories of the gamma-matrix phases of the alloys are found to follow approximately the equilibrium tie-lines, while the trajectories of the gamma'-precipitates do not, resulting in significant differences in the partitioning ratios of the solute elements.

  19. Pathway of FeEDTA transformation and its impact on performance of NOx removal in a chemical absorption-biological reduction integrated process

    PubMed Central

    Li, Wei; Zhao, Jingkai; Zhang, Lei; Xia, Yinfeng; Liu, Nan; Li, Sujing; Zhang, Shihan

    2016-01-01

    A novel chemical absorption-biological reduction (CABR) integrated process, employing ferrous ethylenediaminetetraacetate (Fe(II)EDTA) as a solvent, is deemed as a potential option for NOx removal from the flue gas. Previous work showed that the Fe(II)EDTA concentration was critical for the NOx removal in the CABR process. In this work, the pathway of FeEDTA (Fe(III)/Fe(II)-EDTA) transformation was investigated to assess its impact on the NOx removal in a biofilter. Experimental results revealed that the FeEDTA transformation involved iron precipitation and EDTA degradation. X-ray photoelectron spectroscopy analysis confirmed the iron was precipitated in the form of Fe(OH)3. The iron mass balance analysis showed 44.2% of the added iron was precipitated. The EDTA degradation facilitated the iron precipitation. Besides chemical oxidation, EDTA biodegradation occurred in the biofilter. The addition of extra EDTA helped recover the iron from the precipitation. The transformation of FeEDTA did not retard the NO removal. In addition, EDTA rather than the iron concentration determined the NO removal efficiency. PMID:26743930

  20. c-Ski inhibits the TGF-beta signaling pathway through stabilization of inactive Smad complexes on Smad-binding elements.

    PubMed

    Suzuki, Hiroyuki; Yagi, Ken; Kondo, Miki; Kato, Mitsuyasu; Miyazono, Kohei; Miyazawa, Keiji

    2004-06-24

    c-Ski inhibits transforming growth factor-beta (TGF-beta) signaling through interaction with Smad proteins. c-Ski represses Smad-mediated transcriptional activation, probably through its action as a transcriptional co-repressor. c-Ski also inhibits TGF-beta-induced downregulation of genes such as c-myc. However, mechanisms for transcriptional regulation of target genes by c-Ski have not been fully determined. In this study, we examined how c-Ski inhibits both TGF-beta-induced transcriptional activation and repression. DNA-affinity precipitation analysis revealed that c-Ski enhances the binding of Smad2 and 4, and to a lesser extent Smad3, to both CAGA and TGF-beta1 inhibitory element probes. A c-Ski mutant, which is unable to interact with Smad4, failed to enhance the binding of Smad complex on these probes and to inhibit the Smad-responsive promoter. These results suggest that stabilization of inactive Smad complexes on DNA is a critical event in c-Ski-mediated inhibition of TGF-beta signaling.

  1. Method of precipitating uranium from an aqueous solution and/or sediment

    DOEpatents

    Tokunaga, Tetsu K; Kim, Yongman; Wan, Jiamin

    2013-08-20

    A method for precipitating uranium from an aqueous solution and/or sediment comprising uranium and/or vanadium is presented. The method includes precipitating uranium as a uranyl vanadate through mixing an aqueous solution and/or sediment comprising uranium and/or vanadium and a solution comprising a monovalent or divalent cation to form the corresponding cation uranyl vanadate precipitate. The method also provides a pathway for extraction of uranium and vanadium from an aqueous solution and/or sediment.

  2. Proceedings from the Conference on Critical Issues in the Development of High Temperature Structural Materials Held in Kona, Hawaii on March 7-14, 1993,

    DTIC Science & Technology

    1993-01-14

    composite has not been established and may restrict the use temperature; and/or lifetime. Precipitation of second phase particles in a master alloy (XD...intermetallic alloys with both ordered and disordered precipitate phases including precipitates based upon carbide or nitride phases which involve an...to identify likely pathways or to eliminate others i.e., define a transformation hierarchy. The crystallographic symmetries of the precipitate phase

  3. Glucose, fructose and sucrose increase the solubility of protein-tannin complexes and at high concentration, glucose and sucrose interfere with bisulphite bleaching of wine pigments.

    PubMed

    Harbertson, James F; Yuan, Chunlong; Mireles, Maria S; Hanlin, Rachel L; Downey, Mark O

    2013-05-01

    Wines were modified with increasing sugar concentrations and decreasing tannin concentrations and analysed by a combination of protein precipitation and bisulphite bleaching. Increasing sugar concentration decreased the precipitation of tannin and protein-precipitable polymeric pigments (PPP). The use of a hydrogen bond disruptor (urea) to reduce protein-tannin and protein-pigment complex formation showed that the effect of sugar concentration occurred by increasing the solubility of the tannin-protein complex, not by interfering with protein-tannin complex formation. By increasing the solubility of pigment-protein complexes, non-protein-precipitable polymeric pigments (nPPP) appeared to increase. There was also an increase in total polymeric pigments at each tannin concentration with increasing glucose and sucrose concentration, indicating that sugar concentration might also affect bisulphite bleaching of wine pigments. While a significant effect of sugar concentration on tannin-protein complex solubility was observed, these effects were greatest at sugar concentrations far in excess of normal wine making conditions. Under normal wine making conditions, sugar concentration will have a negligible effect on protein-precipitable tannin, PPP and nPPP concentrations. Copyright © 2012 Elsevier Ltd. All rights reserved.

  4. Coherent to incoherent transition of precipitates during rupture test in TP347H austenitic stainless steels

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hong, Chang-Whan; Heo, Yoon-Uk, E-mail: yunuk01@postech.ac.kr; Heo, Nam-Hoe

    2016-05-15

    Precipitation of various particles and their growth during rupture test have been investigated in TP347H austenitic stainless steels using a transmission electron microscopy. Various precipitates of MnS, Nb-rich MC, and MnS + MC and MnS + M{sub 2}P complexes are observed in the γ matrix after rupture test at 750 °C. The MnS particles formed independently in the γ matrix show a coherency or semi-coherency with the γ matrix. The Nb-rich MC carbides show also a coherency with the γ matrix. The Nb-rich MC carbides showing a semi-coherency with the MnS also form on the surface of the coherent ormore » semi-coherent MnS particles, and they show a cube-cube orientation relationship with the MnS particles. The MnS + MC complex loses the initial coherency with the γ matrix, as the MC in the complex grows. The Nb-rich M{sub 2}P precipitates formed on the surface of the MnS particles do not show an orientation relationship with the MnS particles or the γ matrix. The MnS particles in the MnS + M{sub 2}P complex hold the initial coherency with the γ matrix. Effects of MnS precipitation followed by the formation of the complexes on rupture life of the TP347H austenitic stainless steels are discussed from the viewpoint of MnS precipitates acting as sinks of free sulfur segregating to the grain boundaries. - Highlights: • Coherent to incoherent transition of precipitates during rupture test in TP347H steels is clarified. • MnS precipitation actively retards the time to intergranular fracture. • Effect of the coherency of secondary precipitates on the coherency loss of the complex particle is compared.« less

  5. Local Anesthetic-Induced Neurotoxicity

    PubMed Central

    Verlinde, Mark; Hollmann, Markus W.; Stevens, Markus F.; Hermanns, Henning; Werdehausen, Robert; Lirk, Philipp

    2016-01-01

    This review summarizes current knowledge concerning incidence, risk factors, and mechanisms of perioperative nerve injury, with focus on local anesthetic-induced neurotoxicity. Perioperative nerve injury is a complex phenomenon and can be caused by a number of clinical factors. Anesthetic risk factors for perioperative nerve injury include regional block technique, patient risk factors, and local anesthetic-induced neurotoxicity. Surgery can lead to nerve damage by use of tourniquets or by direct mechanical stress on nerves, such as traction, transection, compression, contusion, ischemia, and stretching. Current literature suggests that the majority of perioperative nerve injuries are unrelated to regional anesthesia. Besides the blockade of sodium channels which is responsible for the anesthetic effect, systemic local anesthetics can have a positive influence on the inflammatory response and the hemostatic system in the perioperative period. However, next to these beneficial effects, local anesthetics exhibit time and dose-dependent toxicity to a variety of tissues, including nerves. There is equivocal experimental evidence that the toxicity varies among local anesthetics. Even though the precise order of events during local anesthetic-induced neurotoxicity is not clear, possible cellular mechanisms have been identified. These include the intrinsic caspase-pathway, PI3K-pathway, and MAPK-pathways. Further research will need to determine whether these pathways are non-specifically activated by local anesthetics, or whether there is a single common precipitating factor. PMID:26959012

  6. Local Anesthetic-Induced Neurotoxicity.

    PubMed

    Verlinde, Mark; Hollmann, Markus W; Stevens, Markus F; Hermanns, Henning; Werdehausen, Robert; Lirk, Philipp

    2016-03-04

    This review summarizes current knowledge concerning incidence, risk factors, and mechanisms of perioperative nerve injury, with focus on local anesthetic-induced neurotoxicity. Perioperative nerve injury is a complex phenomenon and can be caused by a number of clinical factors. Anesthetic risk factors for perioperative nerve injury include regional block technique, patient risk factors, and local anesthetic-induced neurotoxicity. Surgery can lead to nerve damage by use of tourniquets or by direct mechanical stress on nerves, such as traction, transection, compression, contusion, ischemia, and stretching. Current literature suggests that the majority of perioperative nerve injuries are unrelated to regional anesthesia. Besides the blockade of sodium channels which is responsible for the anesthetic effect, systemic local anesthetics can have a positive influence on the inflammatory response and the hemostatic system in the perioperative period. However, next to these beneficial effects, local anesthetics exhibit time and dose-dependent toxicity to a variety of tissues, including nerves. There is equivocal experimental evidence that the toxicity varies among local anesthetics. Even though the precise order of events during local anesthetic-induced neurotoxicity is not clear, possible cellular mechanisms have been identified. These include the intrinsic caspase-pathway, PI3K-pathway, and MAPK-pathways. Further research will need to determine whether these pathways are non-specifically activated by local anesthetics, or whether there is a single common precipitating factor.

  7. Competing retention pathways of uranium upon reaction with Fe(II)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Massey, Michael S.; Lezama Pacheco, Juan S.; Jones, Morris

    Biogeochemical retention processes, including adsorption, reductive precipitation, and incorporation into host minerals, are important in contaminant transport, remediation, and geologic deposition of uranium. Recent work has shown that U can become incorporated into iron (hydr)oxide minerals, with a key pathway arising from Fe(II)-induced transformation of ferrihydrite, (Fe(OH)3•nH2O) to goethite (α-FeO(OH)); this is a possible U retention mechanism in soils and sediments. Several key questions, however, remain unanswered regarding U incorporation into iron (hydr)oxides and this pathway’s contribution to U retention, including: (i) the competitiveness of U incorporation versus reduction to U(IV) and subsequent precipitation of UO2; (ii) the oxidation statemore » of incorporated U; (iii) the effects of uranyl aqueous speciation on U incorporation; and, (iv) the mechanism of U incorporation. Here we use a series of batch reactions conducted at pH ~7, [U(VI)] from 1 to 170 μM, [Fe(II)] from 0 to 3 mM, and [Ca] at 0 or 4 mM) coupled with spectroscopic examination of reaction products of Fe(II)-induced ferrihydrite transformation to address these outstanding questions. Uranium retention pathways were identified and quantified using extended x-ray absorption fine structure (EXAFS) spectroscopy, x-ray powder diffraction, x-ray photoelectron spectroscopy, and transmission electron microscopy. Analysis of EXAFS spectra showed that 14 to 89% of total U was incorporated into goethite, upon reaction with Fe(II) and ferrihydrite. Uranium incorporation was a particularly dominant retention pathway at U concentrations ≤ 50 μM when either uranyl-carbonato or calcium-uranyl-carbonato complexes were dominant, accounting for 64 to 89% of total U. With increasing U(VI) and Fe(II) concentrations, U(VI) reduction to U(IV) became more prevalent, but U incorporation remained a functioning retention pathway. These findings highlight the potential importance of U(V) incorporation within iron oxides as a retention process of U across a wide range of biogeochemical environments and the sensitivity of uranium retention processes to operative (bio)geochemical conditions.« less

  8. Long– and short-term precipitation effects on soil CO2 efflux and total belowground carbon allocation

    Treesearch

    Chelcy R. Ford; Jason McGee; Francesca Scandellari; Erik A. Hobbie; Robert J. Mitchell

    2012-01-01

    Soil CO2 efflux (Esoil), the main pathway of C movement from the biosphere to the atmosphere, is critical to the terrestrial C cycle but how precipitation and soil moisture influence Esoil remains poorly understood. Here, we irrigated a longleaf pine wiregrass savanna for six years; this increased soil moisture by 41.2%. We tested how an altered precipitation regime...

  9. Impact of dissolution and carbonate precipitation on carbon storage in basalt

    NASA Astrophysics Data System (ADS)

    Wells, R. K.; Xiong, W.; Tadeoye, J.; Menefee, A.; Ellis, B. R.; Skemer, P. A.; Giammar, D.

    2016-12-01

    The spatial evolution of silicate mineral dissolution, carbonate precipitation, and the transport of fluids influence the viability of carbon storage in basalt reservoirs. Dissolution of natural basalt and subsequent carbonate precipitation in systems with different transport processes operating were characterized using static and flow-through (5 mL/hr) experiments at 50, 100, and 150 °C, and 100 bar CO2. Intact samples and cores with milled pathways that simulate fractures were tested. Spatial and mineralogical patterns in dissolution and precipitation were analyzed using optical and electron microscopy, microCT scanning, and surface roughness data. Precipitates and fluid chemistry were analyzed using Raman spectroscopy, SEM-EDS, and ICP-MS. Analysis of the bulk solution and surface topography suggests dissolution of olivine and pyroxene grains begins within hours of the start of the experiments. In flow-through experiments, total effluent cation concentrations reach a peak concentration within a few hours then drop towards a steady state within a few days. In static experiments, the initial rate of cation release is faster than it is after several weeks. In both cases Ca2+, Mg2+, and Fe2+ are the dominant cations in solution in the initial stages of reaction. Lower concentrations of Na2+, K+, and Al3+, and the preservation of feldspar and matrix grains after several weeks of reaction indicate the slow reactivity of these minerals. As the reaction progresses, the surface roughness increases steadily with cavities developing at the sites of olivine and pyroxene grains. Post-reaction analysis of basalt samples reacted at static conditions with milled pathways reveals that both siderite and amorphous silica precipitated within diffusion-limited zones as early as 4-6 weeks. Siderite abundance varies with distance along the pathway with the highest concentration of carbonates 1-2 cm below the fracture opening. Siderite precipitates are large enough to fill fracture opening 100 μm wide within 4-6 weeks.

  10. The magnesium isotope (δ26Mg) signature of dolomites

    NASA Astrophysics Data System (ADS)

    Geske, A.; Goldstein, R. H.; Mavromatis, V.; Richter, D. K.; Buhl, D.; Kluge, T.; John, C. M.; Immenhauser, A.

    2015-01-01

    Dolomite precipitation models and kinetics are debated and complicated due to the complex and temporally fluctuating fluid chemistry and different diagenetic environments. Using well-established isotope systems (δ18O, δ13C, 87Sr/86Sr), fluid inclusions and elemental data, as well as a detailed sedimentological and petrographic data set, we established the precipitation environment and subsequent diagenetic pathways of a series of Proterozoic to Pleistocene syn-depositional marine evaporative (sabkha) dolomites, syn-depositional non-marine evaporative (lacustrine and palustrine) dolomites, altered marine ("mixing zone") dolomites and late diagenetic hydrothermal dolomites. These data form the prerequisite for a systematic investigation of dolomite magnesium isotope ratios (δ26Mgdol). Dolomite δ26Mg ratios documented here range, from -2.49‰ to -0.45‰ (δ26Mgmean = -1.75 ± 1.08‰, n = 42). The isotopically most depleted end member is represented by earliest diagenetic marine evaporative sabkha dolomites (-2.11 ± 0.54‰ 2σ, n = 14). In comparing ancient compositions to modern ones, some of the variation is probably due to alteration. Altered marine (-1.41 ± 0.64‰ 2σ, n = 4), and earliest diagenetic lacustrine and palustrine dolomites (-1.25 ± 0.86‰ 2σ, n = 14) are less negative than sabkha dolomites but not distinct in composition. Various hydrothermal dolomites are characterized by a comparatively wide range of δ26Mg ratios, with values of -1.44 ± 1.33‰ (2σ, n = 10). By using fluid inclusion data and clumped isotope thermometry (Δ47) to represent temperature of precipitation for hydrothermal dolomites, there is no correlation between fluid temperature (∼100 to 180 °C) and dolomite Mg isotope signature (R2 = 0.14); nor is there a correlation between δ26Mgdol and δ18Odol. Magnesium-isotope values of different dolomite types are affected by a complex array of different Mg sources and sinks, dissolution/precipitation and non-equilibrium fractionation processes and overprinted during diagenetic resetting. Further progress on the use of δ26Mgdol as a proxy will require new theoretical and experimental data for Δ26Mgfluid-dol that includes dehydration effects of the free Mg aquo ion versus fluid temperature. In ancient diagenetic systems, complex variables must be considered. These include fluid chemistry and physical properties, Mg sources and sinks, temporal changes during precipitation and post-precipitation processes including open and closed system geochemical exchange with ambient fluids. All of these factors complicate the application of δ26Mgdol as proxy for their depositional or diagenetic environments. Nevertheless, the data shown here also indicate that δ26Mgdol can in principle be interpreted within a detailed framework of understanding.

  11. A Perspective on Diagenetic Geometries and Patterns of Iron Oxide Cement and Coloration: Understanding Challenges and Complexities

    NASA Astrophysics Data System (ADS)

    Chan, M. A.; Wang, Y.

    2015-12-01

    Diagenetic records of fluid flow are underutilized proxies of water and environmental conditions in sedimentary rocks on Earth as well as Mars. The terrestrial iron-oxide records can be highly varied from faint wisps of coloration, to heavily cemented masses and layers. Other than vein cements, concretionary forms are some of the most prominent, yet enigmatic records. Concretions can have various mineral cement compositions with sizes that can span three orders of magnitude from mm, to cm, and m scales, in remarkably consistent, common spheroidal forms. Concretion geometries and banding may indicate directions and timings of fluid flow and precipitation, but deciphering the origins can be difficult with limited analytical tools. Definite complexities are the possibilities of: 1) overprinted events in an open system; 2) the role of organics in the nucleation and precipitation of authigenic minerals; and 3) multiple fluids, pathways, or processes that may produce similar-looking end products. In near-surface environments, likely any water since the Proterozoic has contained microbial life, and thus it seems highly probable that microbes play a significant role in the precipitation of diagenetic minerals due to the interactions of the biosphere and geosphere. However, recognition of ancient biosignatures that may have poor preservation potential remains a challenge. Iron oxides are particularly common, valuable indicators of near-surface iron cycling and are recognizable because the visual coloration. Our recent studies in Jurassic sandstones indicate preserved records of fingering at the interface of two immiscible fluids. The integration of geochemical self-organization models and field data provides new insights to understanding diagenetic fluid compositions, their relative densities, and flow direction flux and movement. These studies can have valuable implications and applications for understanding past fluid flow history, and reservoir characterization for CO2, hydrocarbon, and water.

  12. Investigation of Microphysical Parameters within Winter and Summer Type Precipitation Events over Mountainous [Complex] Terrain

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stalker, James R.; Bossert, James E.

    1997-12-31

    In this study we investigate complex terrain effects on precipitation with RAMS for both in winter and summer cases from a microphysical perspective. We consider a two dimensional east-west topographic cross section in New Mexico representative of the Jemez mountains on the west and the Sangre de Cristo mountains on the east. Located between these two ranges is the Rio Grande Valley. In these two dimensional experiments, variations in DSDs are considered to simulate total precipitation that closely duplicate observed precipitation.

  13. Origin of sulfur for elemental sulfur concentration in salt dome cap rocks, Gulf Coast Basin, USA

    NASA Astrophysics Data System (ADS)

    Hill, J. M.; Kyle, R.; Loyd, S. J.

    2017-12-01

    Calcite cap rocks of the Boling and Main Pass salt domes contain large elemental sulfur accumulations. Isotopic and petrographic data indicate complex histories of cap rock paragenesis for both domes. Whereas paragenetic complexity is in part due to the open nature of these hydrodynamic systems, a comprehensive understanding of elemental sulfur sources and concentration mechanisms is lacking. Large ranges in traditional sulfur isotope compositions (δ34S) among oxidized and reduced sulfur-bearing phases has led some to infer that microbial sulfate reduction and/or influx of sulfide-rich formation waters occurred during calcite cap rock formation. Ultimately, traditional sulfur isotope analyses alone cannot distinguish among local microbial or exogenous sulfur sources. Recently, multiple sulfur isotope (32S, 33S, 34S, 36S) studies reveal small, but measurable differences in mass-dependent behavior of microbial and abiogenic processes. To distinguish between the proposed sulfur sources, multiple-sulfur-isotope analyses have been performed on native sulfur from the Boling and Main Pass cap rocks. Similarities or deviations from equilibrium relationships indicate which pathways were responsible for native sulfur precipitation. Pathway determination provides insight into Gulf Coast cap rock development and potentially highlights the conditions that led to anomalous sulfur enrichment in Boling and Main Pass Domes.

  14. The rough endoplasmatic reticulum is a central nucleation site of siRNA-mediated RNA silencing

    PubMed Central

    Stalder, Lukas; Heusermann, Wolf; Sokol, Lena; Trojer, Dominic; Wirz, Joel; Hean, Justin; Fritzsche, Anja; Aeschimann, Florian; Pfanzagl, Vera; Basselet, Pascal; Weiler, Jan; Hintersteiner, Martin; Morrissey, David V; Meisner-Kober, Nicole C

    2013-01-01

    Despite progress in mechanistic understanding of the RNA interference (RNAi) pathways, the subcellular sites of RNA silencing remain under debate. Here we show that loading of lipid-transfected siRNAs and endogenous microRNAs (miRNA) into RISC (RNA-induced silencing complexes), encounter of the target mRNA, and Ago2-mediated mRNA slicing in mammalian cells are nucleated at the rough endoplasmic reticulum (rER). Although the major RNAi pathway proteins are found in most subcellular compartments, the miRNA- and siRNA-loaded Ago2 populations co-sediment almost exclusively with the rER membranes, together with the RISC loading complex (RLC) factors Dicer, TAR RNA binding protein (TRBP) and protein activator of the interferon-induced protein kinase (PACT). Fractionation and membrane co-immune precipitations further confirm that siRNA-loaded Ago2 physically associates with the cytosolic side of the rER membrane. Additionally, RLC-associated double-stranded siRNA, diagnostic of RISC loading, and RISC-mediated mRNA cleavage products exclusively co-sediment with rER. Finally, we identify TRBP and PACT as key factors anchoring RISC to ER membranes in an RNA-independent manner. Together, our findings demonstrate that the outer rER membrane is a central nucleation site of siRNA-mediated RNA silencing. PMID:23511973

  15. OLYMPEX Data Workshop: GPM View

    NASA Technical Reports Server (NTRS)

    Petersen, W.

    2017-01-01

    OLYMPEX Primary Objectives: Datasets to enable: (1) Direct validation over complex terrain at multiple scales, liquid and frozen precip types, (a) Do we capture terrain and synoptic regime transitions, orographic enhancements/structure, full range of precipitation intensity (e.g., very light to heavy) and types, spatial variability? (b) How well can we estimate space/time-accumulated precipitation over terrain (liquid + frozen)? (2) Physical validation of algorithms in mid-latitude cold season frontal systems over ocean and complex terrain, (a) What are the column properties of frozen, melting, liquid hydrometeors-their relative contributions to estimated surface precipitation, transition under the influence of terrain gradients, and systematic variability as a function of synoptic regime? (3) Integrated hydrologic validation in complex terrain, (a) Can satellite estimates be combined with modeling over complex topography to drive improved products (assimilation, downscaling) [Level IV products] (b) What are capabilities and limitations for use of satellite-based precipitation estimates in stream/river flow forecasting?

  16. Prevention of cardiorenal syndromes.

    PubMed

    McCullough, Peter A

    2010-01-01

    The cardiorenal syndromes (CRS) are composed of five recently defined syndromes which represent common clinical scenarios in which both the heart and the kidney are involved in a bidirectional injury process leading to dysfunction of both organs. Common to each subtype are multiple complex pathogenic factors, a precipitous decline in function and a progressive course. Most pathways that lead to CRS involve acute injury to organs which manifest evidence of chronic disease, suggesting reduced ability to sustain damage, maintain vital functions, and facilitate recovery. Prevention of CRS is an ideal clinical goal, because once initiated, CRS cannot be readily aborted, are not completely reversible, and are associated with serious consequences including hospitalization, complicated procedures, need for renal replacement therapy, and death. Principles of prevention include identification and amelioration of precipitating factors, optimal management of both chronic heart and kidney diseases, and future use of multimodality therapies for end-organ protection at the time of systemic injury. This paper will review the core concepts of prevention of CRS with practical applications to be considered in today's practice. 2010 S. Karger AG, Basel.

  17. Improved mapping of National Atmospheric Deposition Program wet-deposition in complex terrain using PRISM-gridded data sets

    USGS Publications Warehouse

    Latysh, Natalie E.; Wetherbee, Gregory Alan

    2012-01-01

    High-elevation regions in the United States lack detailed atmospheric wet-deposition data. The National Atmospheric Deposition Program/National Trends Network (NADP/NTN) measures and reports precipitation amounts and chemical constituent concentration and deposition data for the United States on annual isopleth maps using inverse distance weighted (IDW) interpolation methods. This interpolation for unsampled areas does not account for topographic influences. Therefore, NADP/NTN isopleth maps lack detail and potentially underestimate wet deposition in high-elevation regions. The NADP/NTN wet-deposition maps may be improved using precipitation grids generated by other networks. The Parameter-elevation Regressions on Independent Slopes Model (PRISM) produces digital grids of precipitation estimates from many precipitation-monitoring networks and incorporates influences of topographical and geographical features. Because NADP/NTN ion concentrations do not vary with elevation as much as precipitation depths, PRISM is used with unadjusted NADP/NTN data in this paper to calculate ion wet deposition in complex terrain to yield more accurate and detailed isopleth deposition maps in complex terrain. PRISM precipitation estimates generally exceed NADP/NTN precipitation estimates for coastal and mountainous regions in the western United States. NADP/NTN precipitation estimates generally exceed PRISM precipitation estimates for leeward mountainous regions in Washington, Oregon, and Nevada, where abrupt changes in precipitation depths induced by topography are not depicted by IDW interpolation. PRISM-based deposition estimates for nitrate can exceed NADP/NTN estimates by more than 100% for mountainous regions in the western United States.

  18. Improved mapping of National Atmospheric Deposition Program wet-deposition in complex terrain using PRISM-gridded data sets.

    PubMed

    Latysh, Natalie E; Wetherbee, Gregory Alan

    2012-01-01

    High-elevation regions in the United States lack detailed atmospheric wet-deposition data. The National Atmospheric Deposition Program/National Trends Network (NADP/NTN) measures and reports precipitation amounts and chemical constituent concentration and deposition data for the United States on annual isopleth maps using inverse distance weighted (IDW) interpolation methods. This interpolation for unsampled areas does not account for topographic influences. Therefore, NADP/NTN isopleth maps lack detail and potentially underestimate wet deposition in high-elevation regions. The NADP/NTN wet-deposition maps may be improved using precipitation grids generated by other networks. The Parameter-elevation Regressions on Independent Slopes Model (PRISM) produces digital grids of precipitation estimates from many precipitation-monitoring networks and incorporates influences of topographical and geographical features. Because NADP/NTN ion concentrations do not vary with elevation as much as precipitation depths, PRISM is used with unadjusted NADP/NTN data in this paper to calculate ion wet deposition in complex terrain to yield more accurate and detailed isopleth deposition maps in complex terrain. PRISM precipitation estimates generally exceed NADP/NTN precipitation estimates for coastal and mountainous regions in the western United States. NADP/NTN precipitation estimates generally exceed PRISM precipitation estimates for leeward mountainous regions in Washington, Oregon, and Nevada, where abrupt changes in precipitation depths induced by topography are not depicted by IDW interpolation. PRISM-based deposition estimates for nitrate can exceed NADP/NTN estimates by more than 100% for mountainous regions in the western United States.

  19. Radar-derived quantitative precipitation estimation in complex terrain over the eastern Tibetan Plateau

    NASA Astrophysics Data System (ADS)

    Gou, Yabin; Ma, Yingzhao; Chen, Haonan; Wen, Yixin

    2018-05-01

    Quantitative precipitation estimation (QPE) is one of the important applications of weather radars. However, in complex terrain such as Tibetan Plateau, it is a challenging task to obtain an optimal Z-R relation due to the complex spatial and temporal variability in precipitation microphysics. This paper develops two radar QPE schemes respectively based on Reflectivity Threshold (RT) and Storm Cell Identification and Tracking (SCIT) algorithms using observations from 11 Doppler weather radars and 3264 rain gauges over the Eastern Tibetan Plateau (ETP). These two QPE methodologies are evaluated extensively using four precipitation events that are characterized by different meteorological features. Precipitation characteristics of independent storm cells associated with these four events, as well as the storm-scale differences, are investigated using short-term vertical profile of reflectivity (VPR) clusters. Evaluation results show that the SCIT-based rainfall approach performs better than the simple RT-based method for all precipitation events in terms of score comparison using validation gauge measurements as references. It is also found that the SCIT-based approach can effectively mitigate the local error of radar QPE and represent the precipitation spatiotemporal variability better than the RT-based scheme.

  20. Major Pathways to Electron Distribution Function Formation in Regions of Diffuse Aurora

    NASA Technical Reports Server (NTRS)

    Khazanov, George V.; Sibeck, David G.; Zesta, Eftyhia

    2017-01-01

    This paper discusses the major pathways of electron distribution function formation in the region of diffuse aurora. The diffuse aurora accounts for about of 75% of the auroral energy precipitating into the upper atmosphere, and its origin has been the subject of much discussion. We show that an earthward stream of precipitating electrons initially injected from the Earth's plasma sheet via wave-particle interactions degrades in the atmosphere toward lower energies and produces secondary electrons via impact ionization of the neutral atmosphere. These electrons of magnetospheric origin are then reflected back into the magnetosphere along closed dipolar magnetic field lines, leading to a series of reflections and consequent magnetospheric interactions that greatly augment the initially precipitating flux at the upper ionospheric boundary (700-800 km). To date this, systematic magnetosphere-ionosphere coupling element has not been included in auroral research models, and, as we demonstrate in this article, has a dramatic effect (200-300%) on the formation of the precipitating fluxes that result in the diffuse aurora. It is shown that wave-particle interaction processes that drive precipitating fluxes in the region of diffuse aurora from the magnetospheric altitudes are only the first step in the formation of electron precipitation at ionospheric altitudes, and they cannot be separated from the atmospheric collisional machine that redistributes and transfers their energy inside the magnetosphere-ionosphere-atmosphere coupling system.

  1. Major pathways to electron distribution function formation in regions of diffuse aurora

    NASA Astrophysics Data System (ADS)

    Khazanov, George V.; Sibeck, David G.; Zesta, Eftyhia

    2017-04-01

    This paper discusses the major pathways of electron distribution function formation in the region of diffuse aurora. The diffuse aurora accounts for about of 75% of the auroral energy precipitating into the upper atmosphere, and its origin has been the subject of much discussion. We show that an earthward stream of precipitating electrons initially injected from the Earth's plasma sheet via wave-particle interactions degrades in the atmosphere toward lower energies and produces secondary electrons via impact ionization of the neutral atmosphere. These electrons of magnetospheric origin are then reflected back into the magnetosphere along closed dipolar magnetic field lines, leading to a series of reflections and consequent magnetospheric interactions that greatly augment the initially precipitating flux at the upper ionospheric boundary (700-800 km). To date this, systematic magnetosphere-ionosphere coupling element has not been included in auroral research models, and, as we demonstrate in this article, has a dramatic effect (200-300%) on the formation of the precipitating fluxes that result in the diffuse aurora. It is shown that wave-particle interaction processes that drive precipitating fluxes in the region of diffuse aurora from the magnetospheric altitudes are only the first step in the formation of electron precipitation at ionospheric altitudes, and they cannot be separated from the atmospheric "collisional machine" that redistributes and transfers their energy inside the magnetosphere-ionosphere-atmosphere coupling system.

  2. Gypsum crystals observed in experimental and natural sea ice

    NASA Astrophysics Data System (ADS)

    Geilfus, N.-X.; Galley, R. J.; Cooper, M.; Halden, N.; Hare, A.; Wang, F.; Søgaard, D. H.; Rysgaard, S.

    2013-12-01

    gypsum has been predicted to precipitate in sea ice, it has never been observed. Here we provide the first report on gypsum precipitation in both experimental and natural sea ice. Crystals were identified by X-ray diffraction analysis. Based on their apparent distinguishing characteristics, the gypsum crystals were identified as being authigenic. The FREeZing CHEMistry (FREZCHEM) model results support our observations of both gypsum and ikaite precipitation at typical in situ sea ice temperatures and confirms the "Gitterman pathway" where gypsum is predicted to precipitate. The occurrence of authigenic gypsum in sea ice during its formation represents a new observation of precipitate formation and potential marine deposition in polar seas.

  3. Impact of model resolution on simulating the water vapor transport through the central Himalayas: implication for models' wet bias over the Tibetan Plateau

    NASA Astrophysics Data System (ADS)

    Lin, Changgui; Chen, Deliang; Yang, Kun; Ou, Tinghai

    2018-01-01

    Current climate models commonly overestimate precipitation over the Tibetan Plateau (TP), which limits our understanding of past and future water balance in the region. Identifying sources of such models' wet bias is therefore crucial. The Himalayas is considered a major pathway of water vapor transport (WVT) towards the TP. Their steep terrain, together with associated small-scale processes, cannot be resolved by coarse-resolution models, which may result in excessive WVT towards the TP. This paper, therefore, investigated the resolution dependency of simulated WVT through the central Himalayas and its further impact on precipitation bias over the TP. According to a summer monsoon season of simulations conducted using the weather research forecasting (WRF) model with resolutions of 30, 10, and 2 km, the study found that finer resolutions (especially 2 km) diminish the positive precipitation bias over the TP. The higher-resolution simulations produce more precipitation over the southern Himalayan slopes and weaker WVT towards the TP, explaining the reduced wet bias. The decreased WVT is reflected mostly in the weakened wind speed, which is due to the fact that the high resolution can improve resolving orographic drag over a complex terrain and other processes associated with heterogeneous surface forcing. A significant difference was particularly found when the model resolution is changed from 30 to 10 km, suggesting that a resolution of approximately 10 km represents a good compromise between a more spatially detailed simulation of WVT and computational cost for a domain covering the whole TP.

  4. Analysis of the Exhumation Pathways Experienced in the Cascades Range

    NASA Astrophysics Data System (ADS)

    Giles, S. M.; Pesek, M.; Perez, N. D.

    2017-12-01

    The Cascades volcanic arc is the result of subduction of the Juan de Fuca plate beneath North America. The Cascades trend north to south and create a modern orographic precipitation gradient that focuses precipitation along the western flank of the range. However, the deformation style changes from shortening in the north to extension in the south. This experimental design is an ideal location to test how surface and tectonic processes contribute to rock uplift in orogens. In the Oregon Cascades, zircon U-Pb geochronology, and multiple thermochronologic techniques (apatite U-Pb, zircon U-Th/He) will be applied to an intrusive rock exposed along a west-flowing river to investigate the exhumation pathway. These intrusive rocks are capped by late Miocene basalt flows, constraining the timing of surface exposure. The results of this study will define a time-temperature pathway and be compared with existing exhumation constraints from the Washington Cascades to determine whether the exhumation pathways may correspond to the changing structural regimes or consistent climate patterns along strike.

  5. An Evaluation of CMIP5 Precipitation Variability for China Relative to Observations and CMIP3

    NASA Astrophysics Data System (ADS)

    Frauenfeld, O. W.; Chen, L.

    2013-12-01

    Precipitation represents an important link between the atmosphere, hydrosphere, and biosphere and is thus a key component of the climate system. As indicated by the Fourth Assessment Report (AR4) of the Intergovernmental Panel on Climate Change (IPCC), global surface air temperatures increased by 0.74°C during the 20th century, with further warming of 0.2°C/decade projected by the 2030s. Projected changes in precipitation, however, are much more variable, and exhibit more complex temporal and spatial patterns. This presentation focuses on precipitation variability based on 20 general circulation models (GCMs) participating in the fifth coupled model intercomparison project (CMIP5). Specifically, we focus on China and provide a comprehensive evaluation of the CMIP5 models compared to historical 20th century precipitation variability from two observational precipitation products: the University of East Anglia's Climatic Research Unit (CRU) time series (TS) dataset version 3.10, and the Global Precipitation Climatology Centre (GPCC) version 6. We also reassess the performance of the third CMIP (CMIP3) to quantify potential improvements in CMIP5 over the previous generation of GCMs. Finally, we provide 21st century precipitation projections for China based on three representative concentration pathways (RCP): RCP 8.5, 4.5, and 2.6. These future precipitation projections are presented in light of the observed 20th century biases in the models. We find that CMIP5 models are able to better reproduce the general spatial pattern of observed 20th century precipitation than CMIP3. However, for China as a whole, the annual precipitation magnitude is overestimated in CMIP5, more so than in CMIP3. This smaller overestimation in CMIP3 was primarily driven by a large underestimation of summer precipitation. Spatially, overestimated precipitation magnitudes are evident for most regions of China, especially along the eastern margin of the Tibetan Plateau. Over southeastern China during summer, the precipitation amounts are underestimated. The multidecadal precipitation variability in CMIP5 is muted relative to observations, but improved when compared to CMIP3. We also assess precipitation trends and correlations relative to observations, and again find better agreement for CMIP5 than for CMIP3. Both observations and models indicated precipitation increases over parts of northwestern China, and decreases over the Tibetan Plateau throughout the 20th century. However, for the southeastern and northern regions of China there is poor agreement in precipitation trends. Precipitation is projected to increase across all of China under all the three emission scenarios during the 21st century. The largest significant trend is evident for RCP 8.5, which projects a precipitation increase of 1.5 mm/year, resulting in a 16% increase in precipitation by the end of the century. The smallest increases are projected to occur under the RCP 2.6 scenario, resulting in only a +6% change by 2100. The regions of greatest precipitation increases are the Tibetan Plateau and eastern China during summer, suggesting a potential change in the monsoonal circulation in the future.

  6. Assays for myasthenia gravis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lindstrom, J.M.

    1988-12-06

    This patent describes an improvement in a process for diagnosing myasthenia gravis. The process comprises the steps of preparing a complex of acetycholine receptor protein, toxin and a radioactive isotope, incubating the complex with a serum sample from a patient so as to join antibodies engendered in connection with myasthenia gravis to the complex, precipitating the complex joined with antibody with anti-immunoglobulin and measuring radioactivity, from the radioactive isotope, of the precipitated complex. The improvement is that the acetylcholine receptor protein is derived from cells of the TE671 Line.

  7. Formation of Silica-Lysozyme Composites Through Co-Precipitation and Adsorption

    NASA Astrophysics Data System (ADS)

    van den Heuvel, Daniela B.; Stawski, Tomasz M.; Tobler, Dominique J.; Wirth, Richard; Peacock, Caroline L.; Benning, Liane G.

    2018-04-01

    Interactions between silica and proteins are crucial for the formation of biosilica and the production of novel functional hybrid materials for a range of industrial applications. The proteins control both precipitation pathway and the properties of the resulting silica-organic composites. Here we present data on the formation of silica-lysozyme composites through two different synthesis approaches (co-precipitation vs. adsorption) and show that the chemical and structural properties of these composites, when analyzed using a combination of synchrotron-based scattering (total scattering and SAXS), spectroscopic, electron microscopy and potentiometric methods vary dramatically. We document that while lysozyme was not incorporated into nor did its presence alter the molecular structure of silica, it strongly enhanced the aggregation of silica particles due to electrostatic and potentially hydrophobic interactions, leading to the formation of composites with characteristics differing from pure silica. The differences increased with increasing lysozyme content for both synthesis approaches. Yet, the absolute changes differ substantially between the two sets of composites, as lysozyme did not just affect aggregation during co-precipitation but also particle growth and likely polymerization during co-precipitation. Our results improve the fundamental understanding of how organic macromolecules interact with dissolved and nanoparticulate silica and how these interactions control the formation pathway of silica-organic composites from sodium silicate solutions, a widely available and cheap starting material.

  8. International Climate Migration: Evidence for the Climate Inhibitor Mechanism and the Agricultural Pathway

    PubMed Central

    Nawrotzki, Raphael J.; Bakhtsiyarava, Maryia

    2016-01-01

    Research often assumes that, in rural areas of developing countries, adverse climatic conditions increase (climate driver mechanism) rather than reduce (climate inhibitor mechanism) migration, and that the impact of climate on migration is moderated by changes in agricultural productivity (agricultural pathway). Using representative census data in combination with high-resolution climate data derived from the novel Terra Populus system, we explore the climate-migration relationship in rural Burkina Faso and Senegal. We construct four threshold-based climate measures to investigate the effect of heat waves, cold snaps, droughts and excessive precipitation on the likelihood of household-level international outmigration. Results from multi-level logit models show that excessive precipitation increases international migration from Senegal while heat waves decrease international mobility in Burkina Faso, providing evidence for the climate inhibitor mechanism. Consistent with the agricultural pathway, interaction models and results from a geographically weighted regression (GWR) reveal a conditional effect of droughts on international outmigration from Senegal, which becomes stronger in areas with high levels of groundnut production. Moreover, climate change effects show a clear seasonal pattern, with the strongest effects appearing when heat waves overlap with the growing season and when excessive precipitation occurs prior to the growing season. PMID:28943813

  9. International Climate Migration: Evidence for the Climate Inhibitor Mechanism and the Agricultural Pathway.

    PubMed

    Nawrotzki, Raphael J; Bakhtsiyarava, Maryia

    2017-05-01

    Research often assumes that, in rural areas of developing countries, adverse climatic conditions increase (climate driver mechanism) rather than reduce (climate inhibitor mechanism) migration, and that the impact of climate on migration is moderated by changes in agricultural productivity (agricultural pathway). Using representative census data in combination with high-resolution climate data derived from the novel Terra Populus system, we explore the climate-migration relationship in rural Burkina Faso and Senegal. We construct four threshold-based climate measures to investigate the effect of heat waves, cold snaps, droughts and excessive precipitation on the likelihood of household-level international outmigration. Results from multi-level logit models show that excessive precipitation increases international migration from Senegal while heat waves decrease international mobility in Burkina Faso, providing evidence for the climate inhibitor mechanism. Consistent with the agricultural pathway, interaction models and results from a geographically weighted regression (GWR) reveal a conditional effect of droughts on international outmigration from Senegal, which becomes stronger in areas with high levels of groundnut production. Moreover, climate change effects show a clear seasonal pattern, with the strongest effects appearing when heat waves overlap with the growing season and when excessive precipitation occurs prior to the growing season.

  10. Effect of evaporation and freezing on the salt paragenesis and habitability of brines at the Phoenix landing site

    NASA Astrophysics Data System (ADS)

    Elsenousy, Amira; Hanley, Jennifer; Chevrier, Vincent F.

    2015-07-01

    The WCL (Wet Chemistry Lab) instrument on board the Phoenix Lander identified the soluble ionic composition of the soil at the landing site. However, few studies have been conducted to understand the parent salts of these soluble ions. Here we studied the possible salt assemblages at the Phoenix landing site using two different thermodynamic models: FREZCHEM and Geochemist's Workbench (GWB). Two precipitation pathways were used: evaporation (T > 0 °C using both FREZCHEM and GWB) and freezing (T < 0 °C using only FREZCHEM). Through applying three different models of initial ionic concentrations (from sulfate to chlorate/perchlorate dominated), we calculated the resulting precipitated minerals. The results-through both freezing and evaporation-showed some common minerals that precipitated regardless of the ionic initial concentration. These ubiquitous minerals are magnesium chlorate hexahydrate Mg(ClO3)2ṡ6H2O, potassium perchlorate (KClO4) and gypsum (CaSO4ṡ2H2O). Other minerals evidence specific precipitation pathway. Precipitation of highly hydrated salts such as meridianiite (MgSO4ṡ11H2O) and MgCl2ṡ12H2O indicate freezing pathway, while precipitation of the low hydrated salts (anhydrite, kieserite and epsomite) indicate evaporation. The present hydration states of the precipitated hydrated minerals probably reflect the ongoing thermal processing and recent seasonally varying humidity conditions at the landing site, but these hydration states might not reflect the original depositional conditions. The simulations also showed the absence of Ca-perchlorate in all models, mainly because of the formation of two main salts: KClO4 and gypsum which are major sinks for ClO-4 and Ca2+ respectively. Finally, in consideration to the Martian life, it might survive at the very low temperatures and low water activities of the liquids formed. However, besides the big and widely recognized challenges to life posed by those extreme environmental parameters (especially low water activity), another main challenge for any form of life in such an environment is to maintain contact with the small droplets of the stable liquids in the regolith and to interact with life in other isolated droplets.

  11. Intestinal Effector T Cells in Health and Disease

    PubMed Central

    Maynard, Craig L.; Weaver, Casey T.

    2011-01-01

    Summary Crohn’s disease and ulcerative colitis are the two major forms of chronic relapsing inflammatory disorders of the human intestines collectively referred to as inflammatory bowel disease (IBD). Though a complex set of autoinflammatory disorders that can be precipitated by diverse genetic and environmental factors, a feature that appears common to IBD pathogenesis is a dysregulated effector T cell response to the commensal microbiota. Due to the heightened effector T cell activity in IBD, developmental and functional pathways that give rise to these cells are potential targets for therapeutic intervention. In this review, we highlight recent advances in our understanding of effector T cell biology in the context of intestinal immune regulation and speculate on their potential clinical significance. PMID:19766082

  12. Iron (III) Matrix Effects on Mineralization and Immobilization of Actinides

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cynthia-May S. Gong; Tyler A. Sullens; Kenneth R. Czerwinski

    2006-01-01

    Abstract - A number of models for the Yucca Mountain Project nuclear waste repository use studies of actinide sorption onto well-defined iron hydroxide materials. In the case of a waste containment leak, however, a complex interaction between dissolved waste forms and failed containment vessel components can lead to immediate precipitation of migratory iron and uranyl in the silicate rich near-field environment. Use of the Fe(III) and UO22+ complexing agent acetohydroxamic acid (AHA) as a colorimetric agent for visible spectrophotometry is well-known. Using the second derivative of these spectra a distinct shift in iron complexation in the presence of silicate ismore » seen that is not seen with uranyl or alone. Silica also decreases the ability of uranyl and ferric solutions to absorb hydroxide, hastening precipitation. These ferric silicate precipitates are highly amorphous and soluble. Precipitates formed in the presence of uranyl below ~1 mol% exhibit lower solubility than precipitates from up to 50 mol % and of uranyl silicates alone.« less

  13. Aluminum(III) speciation with acetate and oxalate. A potentiometric and sup 27 Al NMR study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Thomas, F.; Rouiller, J.; Genevrier, F.

    1991-09-01

    Aluminum (III) hydrolysis and precipitation in the presence of acetic acid and oxalic acid have been studied by combining potentiometric titration and liquid-state {sup 27}Al NMR. The main aluminum species have thus been identified and quantified: unreacted hydrolyzed, complexed monomers, and the Al{sub 13} tridecamer. A solid species appeared when precipitation occurred and was quantified by difference with the other species. The quantitative evolution of these species was followed for pH values up to 5. Acetate forms weak complexes with aluminum. The precipitated phase was hypothesized to be aggregated Al{sub 13}. Oxalate forms strong multiligand complexes to form Al{sub 13}more » requires higher hydroxyl content. High oxalate contents (L/M > 1) inhibit tridecamer formation and precipitation occurs only at high pH values. With oxalate the precipitated phase seems to be devoid of Al{sub 13} and of a more condensed nature than it is with acetate.« less

  14. Hafnium radioisotope recovery from irradiated tantalum

    DOEpatents

    Taylor, Wayne A.; Jamriska, David J.

    2001-01-01

    Hafnium is recovered from irradiated tantalum by: (a) contacting the irradiated tantalum with at least one acid to obtain a solution of dissolved tantalum; (b) combining an aqueous solution of a calcium compound with the solution of dissolved tantalum to obtain a third combined solution; (c) precipitating hafnium, lanthanide, and insoluble calcium complexes from the third combined solution to obtain a first precipitate; (d) contacting the first precipitate of hafnium, lanthanide and calcium complexes with at least one fluoride ion complexing agent to form a fourth solution; (e) selectively adsorbing lanthanides and calcium from the fourth solution by cationic exchange; (f) separating fluoride ion complexing agent product from hafnium in the fourth solution by adding an aqueous solution of ferric chloride to obtain a second precipitate containing the hafnium and iron; (g) dissolving the second precipitate containing the hafnium and iron in acid to obtain an acid solution of hafnium and iron; (h) selectively adsorbing the iron from the acid solution of hafnium and iron by anionic exchange; (i) drying the ion exchanged hafnium solution to obtain hafnium isotopes. Additionally, if needed to remove residue remaining after the product is dried, dissolution in acid followed by cation exchange, then anion exchange, is performed.

  15. Radar-derived Quantitative Precipitation Estimation in Complex Terrain over the Eastern Tibetan Plateau

    NASA Astrophysics Data System (ADS)

    Gou, Y.

    2017-12-01

    Quantitative Precipitation Estimation (QPE) is one of the important applications of weather radars. However, in complex terrain such as Tibetan Plateau, it is a challenging task to obtain an optimal Z-R relation due to the complex space time variability in precipitation microphysics. This paper develops two radar QPE schemes respectively based on Reflectivity Threshold (RT) and Storm Cell Identification and Tracking (SCIT) algorithms using observations from 11 Doppler weather radars and 3294 rain gauges over the Eastern Tibetan Plateau (ETP). These two QPE methodologies are evaluated extensively using four precipitation events that are characterized by different meteorological features. Precipitation characteristics of independent storm cells associated with these four events, as well as the storm-scale differences, are investigated using short-term vertical profiles of reflectivity clusters. Evaluation results show that the SCIT-based rainfall approach performs better than the simple RT-based method in all precipitation events in terms of score comparison using validation gauge measurements as references, with higher correlation (than 75.74%), lower mean absolute error (than 82.38%) and root-mean-square error (than 89.04%) of all the comparative frames. It is also found that the SCIT-based approach can effectively mitigate the radar QPE local error and represent precipitation spatiotemporal variability better than RT-based scheme.

  16. Complex terrain influences ecosystem carbon responses to temperature and precipitation

    NASA Astrophysics Data System (ADS)

    Reyes, W. M.; Epstein, H. E.; Li, X.; McGlynn, B. L.; Riveros-Iregui, D. A.; Emanuel, R. E.

    2017-08-01

    Terrestrial ecosystem responses to temperature and precipitation have major implications for the global carbon cycle. Case studies demonstrate that complex terrain, which accounts for more than 50% of Earth's land surface, can affect ecological processes associated with land-atmosphere carbon fluxes. However, no studies have addressed the role of complex terrain in mediating ecophysiological responses of land-atmosphere carbon fluxes to climate variables. We synthesized data from AmeriFlux towers and found that for sites in complex terrain, responses of ecosystem CO2 fluxes to temperature and precipitation are organized according to terrain slope and drainage area, variables associated with water and energy availability. Specifically, we found that for tower sites in complex terrain, mean topographic slope and drainage area surrounding the tower explained between 51% and 78% of site-to-site variation in the response of CO2 fluxes to temperature and precipitation depending on the time scale. We found no such organization among sites in flat terrain, even though their flux responses exhibited similar ranges. These results challenge prevailing conceptual framework in terrestrial ecosystem modeling that assumes that CO2 fluxes derive from vertical soil-plant-climate interactions. We conclude that the terrain in which ecosystems are situated can also have important influences on CO2 responses to temperature and precipitation. This work has implications for about 14% of the total land area of the conterminous U.S. This area is considered topographically complex and contributes to approximately 15% of gross ecosystem carbon production in the conterminous U.S.

  17. Surface complexation and precipitate geometry for aqueous Zn(II) sorption on ferrihydrite I: X-ray absorption extended fine structure spectroscopy analysis

    USGS Publications Warehouse

    Waychunas, G.A.; Fuller, C.C.; Davis, J.A.

    2002-01-01

    "Two-line" ferrihydrite samples precipitated and then exposed to a range of aqueous Zn solutions (10-5 to 10-3 M), and also coprecipitated in similar Zn solutions (pH 6.5), have been examined by Zn and Fe K-edge X-ray absorption spectroscopy. Typical Zn complexes on the surface have Zn-O distances of 1.97(0.2) A?? and coordination numbers of about 4.0(0.5), consistent with tetrahedral oxygen coordination. This contrasts with Zn-O distances of 2.11(.02) A?? and coordination numbers of 6 to 7 in the aqueous Zn solutions used in sample preparation. X-ray absorption extended fine structure spectroscopy (EXAFS) fits to the second shell of cation neighbors indicate as many as 4 Zn-Fe neighbors at 3.44(.04) A?? in coprecipitated samples, and about two Zn-Fe neighbors at the same distance in adsorption samples. In both sets of samples, the fitted coordination number of second shell cations decreases as sorption density increases, indicating changes in the number and type of available complexing sites or the onset of competitive precipitation processes. Comparison of our results with the possible geometries for surface complexes and precipitates suggests that the Zn sorption complexes are inner sphere and at lowest adsorption densities are bidentate, sharing apical oxygens with adjacent edge-sharing Fe(O,OH)6 octahedra. Coprecipitation samples have complexes with similar geometry, but these are polydentate, sharing apices with more than two adjacent edge-sharing Fe(O,OH)6 polyhedra. The results are inconsistent with Zn entering the ferrihydrite structure (i.e., solid solution formation) or formation of other Zn-Fe precipitates. The fitted Zn-Fe coordination numbers drop with increasing Zn density with a minimum of about 0.8(.2) at Zn/(Zn + Fe) of 0.08 or more. This change appears to be attributable to the onset of precipitation of zinc hydroxide polymers with mainly tetrahedral Zn coordination. At the highest loadings studied, the nature of the complexes changes further, and a second type of precipitate forms. This has a structure based on a brucite layer topology, with mainly octahedral Zn coordination. Amorphous zinc hydroxide samples prepared for comparison had a closely similar local structure. Analysis of the Fe K-edge EXAFS is consistent with surface complexation reactions and surface precipitation at high Zn loadings with little or no Fe-Zn solid solution formation. The formation of Zn-containing precipitates at solution conditions two or more orders of magnitude below their solubility limit is compared with other sorption and spectroscopic studies that describe similar behavior. Copyright ?? 2002 Elsevier Science Ltd.

  18. Application of hierarchical clustering method to classify of space-time rainfall patterns

    NASA Astrophysics Data System (ADS)

    Yu, Hwa-Lung; Chang, Tu-Je

    2010-05-01

    Understanding the local precipitation patterns is essential to the water resources management and flooding mitigation. The precipitation patterns can vary in space and time depending upon the factors from different spatial scales such as local topological changes and macroscopic atmospheric circulation. The spatiotemporal variation of precipitation in Taiwan is significant due to its complex terrain and its location at west pacific and subtropical area, where is the boundary between the pacific ocean and Asia continent with the complex interactions among the climatic processes. This study characterizes local-scale precipitation patterns by classifying the historical space-time precipitation records. We applied the hierarchical ascending clustering method to analyze the precipitation records from 1960 to 2008 at the six rainfall stations located in Lan-yang catchment at the northeast of the island. Our results identify the four primary space-time precipitation types which may result from distinct driving forces from the changes of atmospheric variables and topology at different space-time scales. This study also presents an important application of the statistical downscaling to combine large-scale upper-air circulation with local space-time precipitation patterns.

  19. An assessment of differences in gridded precipitation datasets in complex terrain

    NASA Astrophysics Data System (ADS)

    Henn, Brian; Newman, Andrew J.; Livneh, Ben; Daly, Christopher; Lundquist, Jessica D.

    2018-01-01

    Hydrologic modeling and other geophysical applications are sensitive to precipitation forcing data quality, and there are known challenges in spatially distributing gauge-based precipitation over complex terrain. We conduct a comparison of six high-resolution, daily and monthly gridded precipitation datasets over the Western United States. We compare the long-term average spatial patterns, and interannual variability of water-year total precipitation, as well as multi-year trends in precipitation across the datasets. We find that the greatest absolute differences among datasets occur in high-elevation areas and in the maritime mountain ranges of the Western United States, while the greatest percent differences among datasets relative to annual total precipitation occur in arid and rain-shadowed areas. Differences between datasets in some high-elevation areas exceed 200 mm yr-1 on average, and relative differences range from 5 to 60% across the Western United States. In areas of high topographic relief, true uncertainties and biases are likely higher than the differences among the datasets; we present evidence of this based on streamflow observations. Precipitation trends in the datasets differ in magnitude and sign at smaller scales, and are sensitive to how temporal inhomogeneities in the underlying precipitation gauge data are handled.

  20. Germanium recovery from gasification fly ash: evaluation of end-products obtained by precipitation methods.

    PubMed

    Arroyo, Fátima; Font, Oriol; Fernández-Pereira, Constantino; Querol, Xavier; Juan, Roberto; Ruiz, Carmen; Coca, Pilar

    2009-08-15

    In this study the purity of the germanium end-products obtained by two different precipitation methods carried out on germanium-bearing solutions was evaluated as a last step of a hydrometallurgy process for the recovery of this valuable element from the Puertollano Integrated Gasification Combined Cycle (IGCC) fly ash. Since H(2)S is produced as a by-product in the gas cleaning system of the Puertollano IGCC plant, precipitation of germanium as GeS(2) was tested by sulfiding the Ge-bearing solutions. The technological and hazardous issues that surround H(2)S handling conducted to investigate a novel precipitation procedure: precipitation as an organic complex by adding 1,2-dihydroxy benzene pyrocatechol (CAT) and cetyltrimethylammonium bromide (CTAB) to the Ge-bearing solutions. Relatively high purity Ge end-products (90 and 93% hexagonal-GeO(2) purity, respectively) were obtained by precipitating Ge from enriched solutions, as GeS(2) sulfiding the solutions with H(2)S, or as organic complex with CAT/CTAB mixtures and subsequent roasting of the precipitates. Both methods showed high efficiency (>99%) to precipitate selectively Ge using a single precipitation stage from germanium-bearing solutions.

  1. Sol-gel preparation of lead magnesium niobate (PMN) powders and thin films

    DOEpatents

    Boyle, T.J.

    1999-01-12

    A method of preparing a lead magnesium niobium oxide (PMN), Pb(Mg{sub 1/3}Nb{sub 2/3})O{sub 3}, precursor solution by a solvent method wherein a liquid solution of a lead-complex PMN precursor is combined with a liquid solution of a niobium-complex PMN precursor, the combined lead- and niobium-complex liquid solutions are reacted with a magnesium-alkyl solution, forming a PMN precursor solution and a lead-based precipitate, and the precipitate is separated from the reacted liquid PMN precursor solution to form a precipitate-free PMN precursor solution. This precursor solution can be processed to form both ferroelectric powders and thin films. 3 figs.

  2. Sol-Gel Preparation Of Lead Magnesium Ni Obate (Pmn) Powdersand Thin Films

    DOEpatents

    Boyle, Timothy J.

    1999-01-12

    A method of preparing a lead magnesium niobium oxide (PMN), Pb(Mg.sub.1/3 Nb.sub.2/3)O.sub.3, precursor solution by a solvent method wherein a liquid solution of a lead-complex PMN precursor is combined with a liquid solution of a niobium-complex PMN precursor, the combined lead- and niobium-complex liquid solutions are reacted with a magnesium-alkyl solution, forming a PMN precursor solution and a lead-based precipitate, and the precipitate is separated from the reacted liquid PMN precursor solution to form a precipitate-free PMN precursor solution. This precursor solution can be processed to form both ferroelectric powders and thin films.

  3. Identifying and quantifying urban recharge: a review

    NASA Astrophysics Data System (ADS)

    Lerner, David N.

    2002-02-01

    The sources of and pathways for groundwater recharge in urban areas are more numerous and complex than in rural environments. Buildings, roads, and other surface infrastructure combine with man-made drainage networks to change the pathways for precipitation. Some direct recharge is lost, but additional recharge can occur from storm drainage systems. Large amounts of water are imported into most cities for supply, distributed through underground pipes, and collected again in sewers or septic tanks. The leaks from these pipe networks often provide substantial recharge. Sources of recharge in urban areas are identified through piezometry, chemical signatures, and water balances. All three approaches have problems. Recharge is quantified either by individual components (direct recharge, water-mains leakage, septic tanks, etc.) or holistically. Working with individual components requires large amounts of data, much of which is uncertain and is likely to lead to large uncertainties in the final result. Recommended holistic approaches include the use of groundwater modelling and solute balances, where various types of data are integrated. Urban recharge remains an under-researched topic, with few high-quality case studies reported in the literature.

  4. Mapping Precipitation in the Lower Mekong River Basin and the U.S. Affiliated Pacific Islands

    NASA Astrophysics Data System (ADS)

    Lakshmi, V.; Sutton, J. R. P.; Bolten, J. D.

    2017-12-01

    Mapping and quantifying precipitation across varying temporal and spatial scales is of utmost importance in understanding, monitoring, and predicting flooding and drought. While there exists many in-situ precipitation gages that can accurately estimate precipitation in a given location, there are still many areas that lack in-situ gages. Many of these locations do not have precipitation gages because they are rural and/or topographically complex. The purpose of our research was to compare different remotely sensed satellite precipitation estimates with in-situ estimates across topographically complex and rural terrain within the United States Affiliated Pacific Islands (USAPI) and the Lower Mekong River Basin (LMRB). We utilize the publicly available Precipitation Estimation from Remotely Sensed Information using Artificial Neural Networks (PERSIANN) Climate Data Record (CDR) from NOAA and two remotely sensed precipitation products from NASA; the Tropical Rainfall Measuring Mission (TRMM) and the Global Precipitation Measurement (GPM). These precipitation estimates were compared with each other and to the available in-situ precipitation estimates from station gages. We also utilize NASA Landsat data to determine the land cover types of these study areas. Using the precipitation estimates, topography, and the land cover of the study areas, we were able to show areas experiencing differing amounts of rainfall and their agreement with in-situ estimates. Additionally, we study the seasonal and spatial trends in precipitation. These analyses can be used to help understand areas that are experience frequent flood or drought.

  5. The adsorption of orthophosphate onto casein-iron precipitates.

    PubMed

    Mittal, Vikas A; Ellis, Ashling; Ye, Aiqian; Edwards, Patrick J B; Singh, Harjinder

    2018-01-15

    This study explored the interactions of orthophosphate with casein-iron precipitates. Casein-iron precipitates were formed by adding ferric chloride at ≥10mM to sodium caseinate solutions ranging in concentration from 1 to 3%(w/v). The addition of different concentrations of orthophosphate solution to the casein-iron precipitates resulted in gradual adsorption of the orthophosphate, causing re-dispersion of the casein-iron complexes. The interactions of added orthophosphate with iron in the presence and absence of caseins are postulated, and new mechanisms are proposed. The re-dispersed soluble complexes of casein-iron-orthophosphate generated using this process could be used as novel iron fortificants. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Hillslope threshold response to rainfall: (2) development and use of a macroscale model

    Treesearch

    Chris B. Graham; Jeffrey J. McDonnell

    2010-01-01

    Hillslope hydrological response to precipitation is extremely complex and poorly modeled. One possible approach for reducing the complexity of hillslope response and its mathematical parameterization is to look for macroscale hydrological behavior. Hillslope threshold response to storm precipitation is one such macroscale behavior observed at field sites across the...

  7. Rainwater harvesting in the South American Dry Chaco

    NASA Astrophysics Data System (ADS)

    Magliano, P. N.; Baldi, G.; Murray, F.; Aurand, S.; Paez, R. A.; Jobbagy, E. G.

    2014-12-01

    A vast fraction of the South American Dry Chaco ecoregion still relies on rainwater harvesting (RWH) to support, not only livestock production, but domestic and industrial uses as well. As a result, water capture and storage infrastructure is widely disseminated throughout the region. In this work we characterized the most typical RWH systems in two contrastingly developed sub-regions of Dry Chaco ranging from extensive ranching to intensive beef and dairy production (central Argentina and western Paraguay, respectively). In each sub-region, we quantified RWH density, spatial distribution and associations with landscape features; by other hand, we illustrated how the daily dynamic of water stock in a typical RWH system contributes to assess their capture and storage efficiency. We found that randomly distributed, low-tech RWH systems prevail in central Argentina, while clustered and hi-tech systems do it in western Paraguay. Their density was highly contrasting between sub-regions (0.098 vs. 0.94 units/ km2 in central Argentina and western Paraguay, respectively), being exponentially associated with land cleared fraction and proximity to villages. The daily monitoring of water level suggested a positive but complex response of water capture to precipitation. The elongated catchment area, created by roads and trails, could have partially decoupled local precipitation and water yield of the impoundment, favouring the capture of remote precipitation events and generating highly variable water yield under large local precipitation events. Once stored, the rates of water level decline suggested that infiltration exceeded evaporation as a water output pathway (59 vs. 41%, respectively, of total losses). Across both study areas, RWH accounts for less than 1% of the annual precipitation, playing a minor role on the regional water balance; however at a local level, they can affect several hydrological fluxes including the onset of groundwater recharge and the mitigation of extreme runoff events along roads and trails.

  8. Precipitation of the thyrotropin receptor and identification of thyroid autoantigens using Graves' disease immunoglobulins.

    PubMed Central

    Heyma, P; Harrison, L C

    1984-01-01

    The thyrotropin (TSH) receptor is a putative target for autoantibodies in Graves' hyperthyroidism and therefore, should be capable of being identified, isolated, and structurally characterized by immunological means. To this end, four sera from patients with hyperthyroidism, three of which inhibited the binding of 125I-TSH to Triton-solubilized human thyroid membranes, were used to isolate TSH receptors by immunoprecipitation. To account for an effect of TSH binding or receptor occupancy on the ability of Graves' immunoglobulins to precipitate TSH receptors, two approaches were taken: (a) specific 125I-TSH binding activity was measured after solubilized thyroid membranes had been incubated with Graves' sera followed by precipitation with Staphylococcus protein A ("receptor depletion"); (b) TSH binding sites were labeled with 125I-TSH and the complexes were precipitated using Graves' sera and Staphylococcus protein A ("receptor precipitation"). The three sera which inhibited 125I-TSH binding depleted 125I-TSH binding activity between 30-80%. Preformed complexes between Staphylococcus protein A and immunoglobulins in these sera were also able to deplete 125I-TSH binding activity. However, after receptor depletion, the one serum that did not inhibit 125I-TSH binding was associated with a significant increase in 125I-TSH binding. All four sera specifically precipitated 80-100% of receptors identified by prelabeling with 125I-TSH. The dilutions of sera that precipitated 50% of 125I-TSH-receptor complexes ranged from 1:150-1:20. Complexes were partially precipitated by high concentrations of control sera (1:20), but the relative potency of control sera was at least fourfold less than Graves' sera. Immunoprecipitates of 125I-labeled thyroid membranes were analysed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and autoradiography to reveal Graves'-specific bands of reduced molecular weights of 100-110,000, 80-90,000, and 70-75,000. These bands were similar to those obtained from 125I-labeled thyroid membranes purified by TSH affinity chromatography. Thus, Graves' immunoglobulins: (a) precipitate unoccupied and occupied TSH receptors, (b) in one case, neither inhibit binding nor immunodeplete the unoccupied receptor but immunoprecipitate 125I-TSH-receptor complexes, suggesting that binding of TSH may initiate an interaction between the binding site and a separate immunoreactive molecule, and (c) identify the molecular structure of Graves' autoantigens, putatively, the TSH receptor. Images PMID:6088581

  9. Methanol Metabolism in Pseudomonad C

    PubMed Central

    Stieglitz, B.; Mateles, R. I.

    1973-01-01

    Cell suspensions of pseudomonad C, a bacterium capable of growth on methanol as sole carbon source, were able to oxidize methanol, formaldehyde, and formate, although the rates of oxidation for the latter two compounds were much slower. The latter compounds also could not serve as sole carbon sources. Through the use of labeled compounds, it was shown that in the presence of methanol, formaldehyde, formate, and bicarbonate were incorporated into trichloroacetic acid-precipitable material. Hexose phosphate synthetase activity was found, indicating the assimilation of methanol via an allulose pathway. No hydroxypyruvate reductase activity was found, nor was any complex membrane structure observed. Such a combination of characteristics has been observed in an obligate methylotroph (Pseudomonas W1), but pseudomonad C can utilize a variety of non-methyl substrates. Images PMID:4349032

  10. Zinc isotope investigation of surface and pore waters in a mountain watershed impacted by acid rock drainage.

    PubMed

    Aranda, Suzan; Borrok, David M; Wanty, Richard B; Balistrieri, Laurie S

    2012-03-15

    The pollution of natural waters with metals derived from the oxidation of sulfide minerals like pyrite is a global environmental problem. However, the metal loading pathways and transport mechanisms associated with acid rock drainage reactions are often difficult to characterize using bulk chemical data alone. In this study, we evaluated the use of zinc (Zn) isotopes to complement traditional geochemical tools in the investigation of contaminated waters at the former Waldorf mining site in the Rocky Mountains, Colorado, U.S.A. Geochemical signatures and statistical analysis helped in identifying two primary metal loading pathways at the Waldorf site. The first was characterized by a circumneutral pH, high alkalinity, and high Zn/Cd ratios. The second was characterized by acidic pHs and low Zn/Cd ratios. Zinc isotope signatures in surface water samples collected across the site were remarkably similar (the δ(66)Zn, relative to JMC 3-0749-L, for most samples ranged from 0.20 to 0.30‰±0.09‰ 2σ). This probably suggests that the ultimate source of Zn is consistent across the Waldorf site, regardless of the metal loading pathway. The δ(66)Zn of pore water samples collected within a nearby metal-impacted wetland area, however, were more variable, ranging from 0.20 to 0.80‰±0.09‰ 2σ. Here the Zn isotopes seemed to reflect differences in groundwater flow pathways. However, a host of secondary processes might also have impacted Zn isotopes, including adsorption of Zn onto soil components, complexation of Zn with dissolved organic matter, uptake of Zn into plants, and the precipitation of Zn during the formation of reduced sulfur species. Zinc isotope analysis proved useful in this study; however, the utility of this isotopic tool would improve considerably with the addition of a comprehensive experimental foundation for interpreting the complex isotopic relationships found in soil pore waters. Copyright © 2012 Elsevier B.V. All rights reserved.

  11. Effects of 4D-Var data assimilation using remote sensing precipitation products in a WRF over the complex Heihe River Basin

    NASA Astrophysics Data System (ADS)

    Pan, Xiaoduo; Li, Xin; Cheng, Guodong

    2017-04-01

    Traditionally, ground-based, in situ observations, remote sensing, and regional climate modeling, individually, cannot provide the high-quality precipitation data required for hydrological prediction, especially over complex terrain. Data assimilation techniques are often used to assimilate ground observations and remote sensing products into models for dynamic downscaling. In this study, the Weather Research and Forecasting (WRF) model was used to assimilate two satellite precipitation products (TRMM 3B42 and FY-2D) using the 4D-Var data assimilation method. The results show that the assimilation of remote sensing precipitation products can improve the initial WRF fields of humidity and temperature, thereby improving precipitation forecasting and decreasing the spin-up time. Hence, assimilating TRMM and FY-2D remote sensing precipitation products using WRF 4D-Var can be viewed as a positive step toward improving the accuracy and lead time of numerical weather prediction models, particularly for short-term weather forecasting. Future work is proposed to assimilate a suite of remote sensing data, e.g., the combination of precipitation and soil moisture data, into a WRF model to improve 7-8 day forecasts of precipitation and other atmospheric variables.

  12. METHOD OF SEPARATION OF PLUTONIUM FROM CARRIER PRECIPITATES

    DOEpatents

    Dawson, I.R.

    1959-09-22

    The recovery of plutonium from fluoride carrier precipitates is described. The precipitate is dissolved in zirconyl nitrate, ferric nitrate, aluminum nitrate, or a mixture of these complexing agents, and the plutonium is then extracted from the aqueous solution formed with a water-immiscible organic solvent.

  13. SNP by SNP by environment interaction network of alcoholism.

    PubMed

    Zollanvari, Amin; Alterovitz, Gil

    2017-03-14

    Alcoholism has a strong genetic component. Twin studies have demonstrated the heritability of a large proportion of phenotypic variance of alcoholism ranging from 50-80%. The search for genetic variants associated with this complex behavior has epitomized sequence-based studies for nearly a decade. The limited success of genome-wide association studies (GWAS), possibly precipitated by the polygenic nature of complex traits and behaviors, however, has demonstrated the need for novel, multivariate models capable of quantitatively capturing interactions between a host of genetic variants and their association with non-genetic factors. In this regard, capturing the network of SNP by SNP or SNP by environment interactions has recently gained much interest. Here, we assessed 3,776 individuals to construct a network capable of detecting and quantifying the interactions within and between plausible genetic and environmental factors of alcoholism. In this regard, we propose the use of first-order dependence tree of maximum weight as a potential statistical learning technique to delineate the pattern of dependencies underpinning such a complex trait. Using a predictive based analysis, we further rank the genes, demographic factors, biological pathways, and the interactions represented by our SNP [Formula: see text]SNP[Formula: see text]E network. The proposed framework is quite general and can be potentially applied to the study of other complex traits.

  14. Interaction of bovine gallbladder mucin and calcium-binding protein: effects on calcium phosphate precipitation.

    PubMed

    Afdhal, N H; Ostrow, J D; Koehler, R; Niu, N; Groen, A K; Veis, A; Nunes, D P; Offner, G D

    1995-11-01

    Gallstones consist of calcium salts and cholesterol crystals, arrayed on a matrix of gallbladder mucin (GBM), and regulatory proteins like calcium-binding protein (CBP). To determine if interactions between CBP and GBM follow a biomineralization scheme, their mutual binding and effects on CaHPO4 precipitation were studied. Binding of CBP to GBM was assessed by inhibition of the fluorescence of the complex of GBM with bis-1,8-anilinonaphthalene sulfonic acid (bis-ANS). The effects of the proteins on precipitation of CaHPO4 were assessed by nephelometry and gravimetry. Precipitates were analyzed for calcium, phosphate, and protein. CBP and bis-ANS competitively displaced each other from 30 binding sites on mucin, with a 1:1 stoichiometry and similar affinity. The rate of precipitation of CaHPO4 was retarded by mucin and CBP. Precipitate mass was unaffected by GBM alone but decreased with the addition of CBP. Complexing CBP with GBM abolished or moderated this latter effect, altered precipitate morphology, and changed the stoichiometric ratios of Ca to PO4 in the precipitates from 1:1 to 3:2. Mucin and CBP were incorporated into the precipitates. These studies suggest that the formation of calcium-containing gallstones is a biomineralization process regulated by both GBM and CBP.

  15. Possible induction of West syndrome by oxcarbazepine therapy in a patient with complex partial seizures.

    PubMed

    Veerapandiyan, Aravindhan; Singh, Piyush; Mikati, Mohamad A

    2012-03-01

    Oxcarbazepine has been reported to precipitate myoclonic, generalised tonic-clonic, absence, and complex partial seizures, and carbamazepine to precipitate absences, myoclonic seizures and spasms. Here, we report a one-year, six-month-old girl with complex partial seizures who developed infantile spasms, developmental regression, and hypsarrhythmia during the two weeks directly following initiation of oxcarbazepine (14 mg/kg/day). All of these resolved within a few days after discontinuation of this medication. Although we cannot rule out that the above association may have been coincidental, or that the improvement may have been due to concurrent therapy, this case raises the possibility that oxcarbazepine, like carbamazepine, may precipitate infantile spasms and West syndrome.

  16. Spatiotemporal patterns of precipitation inferred from streamflow observations across the Sierra Nevada mountain range

    NASA Astrophysics Data System (ADS)

    Henn, Brian; Clark, Martyn P.; Kavetski, Dmitri; Newman, Andrew J.; Hughes, Mimi; McGurk, Bruce; Lundquist, Jessica D.

    2018-01-01

    Given uncertainty in precipitation gauge-based gridded datasets over complex terrain, we use multiple streamflow observations as an additional source of information about precipitation, in order to identify spatial and temporal differences between a gridded precipitation dataset and precipitation inferred from streamflow. We test whether gridded datasets capture across-crest and regional spatial patterns of variability, as well as year-to-year variability and trends in precipitation, in comparison to precipitation inferred from streamflow. We use a Bayesian model calibration routine with multiple lumped hydrologic model structures to infer the most likely basin-mean, water-year total precipitation for 56 basins with long-term (>30 year) streamflow records in the Sierra Nevada mountain range of California. We compare basin-mean precipitation derived from this approach with basin-mean precipitation from a precipitation gauge-based, 1/16° gridded dataset that has been used to simulate and evaluate trends in Western United States streamflow and snowpack over the 20th century. We find that the long-term average spatial patterns differ: in particular, there is less precipitation in the gridded dataset in higher-elevation basins whose aspect faces prevailing cool-season winds, as compared to precipitation inferred from streamflow. In a few years and basins, there is less gridded precipitation than there is observed streamflow. Lower-elevation, southern, and east-of-crest basins show better agreement between gridded and inferred precipitation. Implied actual evapotranspiration (calculated as precipitation minus streamflow) then also varies between the streamflow-based estimates and the gridded dataset. Absolute uncertainty in precipitation inferred from streamflow is substantial, but the signal of basin-to-basin and year-to-year differences are likely more robust. The findings suggest that considering streamflow when spatially distributing precipitation in complex terrain may improve its representation, particularly for basins whose orientations (e.g., windward-facing) are favored for orographic precipitation enhancement.

  17. Evaluation of the TMPA-3B42 precipitation product using a high-density rain gauge network over complex terrain in northeastern Iberia

    NASA Astrophysics Data System (ADS)

    El Kenawy, Ahmed M.; Lopez-Moreno, Juan I.; McCabe, Matthew F.; Vicente-Serrano, Sergio M.

    2015-10-01

    The performance of the Tropical Rainfall Measuring Mission (TRMM) Multi-satellite Precipitation Analysis (TMPA)-3B42 version 7 product is assessed over north-eastern Iberia, a region with considerable topographical gradients and complexity. Precipitation characteristics from a dense network of 656 rain gauges, spanning the period from 1998 to 2009, are used to evaluate TMPA-3B42 estimates on a daily scale. A set of accuracy estimators, including the relative bias, mean absolute error (MAE), root mean square error (RMSE) and Spearman coefficient was used to evaluate the results. The assessment indicates that TMPA-3B42 product is capable of describing the seasonal characteristics of the observed precipitation over most of the study domain. In particular, TMPA-3B42 precipitation agrees well with in situ measurements, with MAE less than 2.5 mm.day- 1, RMSE of 6.4 mm.day- 1 and Spearman correlation coefficients generally above 0.6. TMPA-3B42 provides improved accuracies in winter and summer, whereas it performs much worse in spring and autumn. Spatially, the retrieval errors show a consistent trend, with a general overestimation in regions of low altitude and underestimation in regions of heterogeneous terrain. TMPA-3B42 generally performs well over inland areas, while showing less skill in the coastal regions. A set of skill metrics, including a false alarm ratio [FAR], frequency bias index [FBI], the probability of detection [POD] and threat score [TS], is also used to evaluate TMPA performance under different precipitation thresholds (1, 5, 10, 25 and 50 mm.day- 1). The results suggest that TMPA-3B42 retrievals perform well in specifying moderate rain events (5-25 mm.day- 1), but show noticeably less skill in producing both light (< 1 mm.day- 1) and heavy rainfall thresholds (more than 50 mm.day- 1). Given the complexity of the terrain and the associated high spatial variability of precipitation in north-eastern Iberia, the results reveal that TMPA-3B42 data provide an informative addition to the spatial and temporal coverage of rain gauges in the domain, offering insights into characteristics of average precipitation and their spatial patterns. However, the satellite-based precipitation data should be used cautiously for monitoring extreme precipitation events, particularly over complex terrain. An improvement in precipitation algorithms is still needed to more accurately reproduce high precipitation events in areas of heterogeneous topography over this region.

  18. CARBONATE METHOD OF SEPARATION OF TETRAVALENT PLUTONIUM FROM FISSION PRODUCT VALUES

    DOEpatents

    Duffield, R.B.; Stoughton, R.W.

    1959-02-01

    It has been found that plutonium forms an insoluble precipitate with carbonate ion when the carbonate ion is present in stoichiometric proportions, while an excess of the carbonate ion complexes plutonium and renders it soluble. A method for separating tetravalent plutonium from lanthanum-group rare earths has been based on this discovery, since these rare earths form insoluble carbonates in approximately neutral solutions. According to the process the pH is adjusted to between 5 and 7, and approximately stoichiometric amounts of carbonate ion are added to the solution causing the formation of a precipitate of plutonium carbonate and the lanthanum-group rare earth carbonates. The precipitate is then separated from the solution and contacted with a carbonate solution of a concentration between 1 M and 3 M to complex and redissolve the plutonium precipitate, and thus separate it from the insoluble rare earth precipitate.

  19. Synoptic controls on precipitation pathways and snow delivery to high-accumulation ice core sites in the Ross Sea region, Antarctica

    NASA Astrophysics Data System (ADS)

    Sinclair, K. E.; Bertler, N. A. N.; Trompetter, W. J.

    2010-11-01

    Dominant storm tracks to two ice core sites on the western margin of the Ross Sea, Antarctica (Skinner Saddle (SKS) and Evans Piedmont Glacier), are investigated to establish key synoptic controls on snow accumulation. This is critical in terms of understanding the seasonality, source regions, and transport pathways of precipitation delivered to these sites. In situ snow depth and meteorological observations are used to identify major accumulation events in 2007-2008, which differ considerably between sites in terms of their magnitude and seasonal distribution. While snowfall at Evans Piedmont Glacier occurs almost exclusively during summer and spring, Skinner Saddle receives precipitation year round with a lull during the months of April and May. Cluster analysis of daily back trajectories reveals that the highest-accumulation days at both sites result from fast-moving air masses, associated with synoptic-scale low-pressure systems. There is evidence that short-duration pulses of snowfall at SKS also originate from mesocyclone development over the Ross Ice Shelf and local moisture sources. Changes in the frequency and seasonal distribution of these mechanisms of precipitation delivery will have a marked impact on annual accumulation over time and will therefore need careful consideration during the interpretation of stable isotope and geochemical records from these ice cores.

  20. Leaching behavior and chemical stability of copper butyl xanthate complex under acidic conditions.

    PubMed

    Chang, Yi Kuo; Chang, Juu En; Chiang, Li Choung

    2003-08-01

    Although xanthate addition can be used for treating copper-containing wastewater, a better understanding of the leaching toxicity and the stability characteristics of the copper xanthate complexes formed is essential. This work was undertaken to evaluate the leaching behavior of copper xanthate complex precipitates by means of toxicity characteristics leaching procedure (TCLP) and semi-dynamic leaching test (SDLT) using 1 N acetic acid solution as the leachant. Also, the chemical stability of the copper xanthate complex during extraction has been examined with the studying of variation of chemical structure using UV-vis, Fourier transform infrared and X-ray photoelectron spectroscopies (XPS). Both TCLP and SDLT results showed that a negligible amount of copper ion was leached out from the copper xanthate complex precipitate, indicating that the complex exhibited a high degree of copper leaching stability under acidic conditions. Nevertheless, chemical structure of the copper xanthate complex precipitate varied during the leaching tests. XPS data suggested that the copper xanthate complex initially contained both cupric and cuprous xanthate, but the unstable cupric xanthate change to the cuprous form after acid extraction, indicating the cuprous xanthate to be the final stabilizing structure. Despite that, the changes of chemical structure did not induce the rapid leaching of copper from the copper xanthate complex.

  1. Are weather models better than gridded observations for precipitation in the mountains? (Invited)

    NASA Astrophysics Data System (ADS)

    Gutmann, E. D.; Rasmussen, R.; Liu, C.; Ikeda, K.; Clark, M. P.; Brekke, L. D.; Arnold, J.; Raff, D. A.

    2013-12-01

    Mountain snowpack is a critical storage component in the water cycle, and it provides drinking water for tens of millions of people in the Western US alone. This water store is susceptible to climate change both because warming temperatures are likely to lead to earlier melt and a temporal shift of the hydrograph, and because changing atmospheric conditions are likely to change the precipitation patterns that produce the snowpack. Current measurements of snowfall in complex terrain are limited in number due in part to the logistics of installing equipment in complex terrain. We show that this limitation leads to statistical artifacts in gridded observations of current climate including errors in precipitation season totals of a factor of two or more, increases in wet day fraction, and decreases in storm intensity. In contrast, a high-resolution numerical weather model (WRF) is able to reproduce observed precipitation patterns, leading to confidence in its predictions for areas without measurements and new observations support this. Running WRF for a future climate scenario shows substantial changes in the spatial patterns of precipitation in the mountains related to the physics of hydrometeor production and detrainment that are not captured by statistical downscaling products. The stationarity in statistical downscaling products is likely to lead to important errors in our estimation of future precipitation in complex terrain.

  2. Evaporation pathways and solubility of Fe-Ca-Mg-rich salts in acid sulfate waters. A model for Martian ancient surface waters

    NASA Astrophysics Data System (ADS)

    Sobron, P.; Sansano, A.; Sanz, A.

    2011-12-01

    It has been suggested that Martian iron rich sulfate and oxyhydroxide deposits were precipitated from meltwaters[1], thought to have been acidic. Alternatively, iron(III)-rich hydrated sulfates from oxidized sulfides observed in the outcrops may occur as a result of long-term reactions[4]. Recent analysis of Martian materials support that they come from hydrothermal activity[5], which is highly consistent with the observation of enriched in iron, magnesium, silicon and calcium materials[2]. Independently of the nature of the sulfate formation paths on Mars, characterizing the interaction of saline mineral assemblages and the aqueous solutions necessary for their formation is significance in assessing Mars' hydrological and mineralogical evolution history. In this work we have characterized a layered deposit(Fig. 1) formed from the evaporation of stream water from Rio Tinto, Spain, a relevant Mars analog site[6]. The minerals detected in-situ, confirmed later via high resolution laser Raman spectroscopy in the laboratory, are, from bottom to top: (A) mixture of goethite and probably schwermannite; (B) goethite; (C) mixture of gypsum and highly hydrated ferric sulfates; (D) hexahydrite; and (E) mixture of hexahydrite and epsomite. What we observed in this deposit is the precipitation of relatively insoluble hydroxysulfates (schwermannite admixed with goethite), followed by the precipitation of other relatively insoluble ferric and gypsum, and finally the occurrence of the very soluble Mg-sulfates. We are currently investigating the correlation of this evaporite deposit with the hydrochemistry of the stream water from which it evaporated through dedicated laboratory analysis of natural mineral and aqueous samples. A solubility model including the minerals identified in this work will be reported at the conference. The study of this particular acid sulfate system (with analog mineralogy to that observed in Meridiani[3]) provides constraints on the evaporation pathways that may lead to a better understanding of the composition of ancient surface waters on Mars from which certain complex mineral assemblages are thought to have been formed.

  3. Performance of Precipitation Algorithms During IPHEx and Observations of Microphysical Characteristics in Complex Terrain

    NASA Astrophysics Data System (ADS)

    Erlingis, J. M.; Gourley, J. J.; Kirstetter, P.; Anagnostou, E. N.; Kalogiros, J. A.; Anagnostou, M.

    2015-12-01

    An Intensive Observation Period (IOP) for the Integrated Precipitation and Hydrology Experiment (IPHEx), part of NASA's Ground Validation campaign for the Global Precipitation Measurement Mission satellite took place from May-June 2014 in the Smoky Mountains of western North Carolina. The National Severe Storms Laboratory's mobile dual-pol X-band radar, NOXP, was deployed in the Pigeon River Basin during this time and employed various scanning strategies, including more than 1000 Range Height Indicator (RHI) scans in coordination with another radar and research aircraft. Rain gauges and disdrometers were also positioned within the basin to verify precipitation estimates and estimation of microphysical parameters. The performance of the SCOP-ME post-processing algorithm on NOXP data is compared with real-time and near real-time precipitation estimates with varying spatial resolutions and quality control measures (Stage IV gauge-corrected radar estimates, Multi-Radar/Multi-Sensor System Quantitative Precipitation Estimates, and CMORPH satellite estimates) to assess the utility of a gap-filling radar in complex terrain. Additionally, the RHI scans collected in this IOP provide a valuable opportunity to examine the evolution of microphysical characteristics of convective and stratiform precipitation as they impinge on terrain. To further the understanding of orographically enhanced precipitation, multiple storms for which RHI data are available are considered.

  4. Predictability of Precipitation Over the Conterminous U.S. Based on the CMIP5 Multi-Model Ensemble

    PubMed Central

    Jiang, Mingkai; Felzer, Benjamin S.; Sahagian, Dork

    2016-01-01

    Characterizing precipitation seasonality and variability in the face of future uncertainty is important for a well-informed climate change adaptation strategy. Using the Colwell index of predictability and monthly normalized precipitation data from the Coupled Model Intercomparison Project Phase 5 (CMIP5) multi-model ensembles, this study identifies spatial hotspots of changes in precipitation predictability in the United States under various climate scenarios. Over the historic period (1950–2005), the recurrent pattern of precipitation is highly predictable in the East and along the coastal Northwest, and is less so in the arid Southwest. Comparing the future (2040–2095) to the historic period, larger changes in precipitation predictability are observed under Representative Concentration Pathways (RCP) 8.5 than those under RCP 4.5. Finally, there are region-specific hotspots of future changes in precipitation predictability, and these hotspots often coincide with regions of little projected change in total precipitation, with exceptions along the wetter East and parts of the drier central West. Therefore, decision-makers are advised to not rely on future total precipitation as an indicator of water resources. Changes in precipitation predictability and the subsequent changes on seasonality and variability are equally, if not more, important factors to be included in future regional environmental assessment. PMID:27425819

  5. Predictability of Precipitation Over the Conterminous U.S. Based on the CMIP5 Multi-Model Ensemble.

    PubMed

    Jiang, Mingkai; Felzer, Benjamin S; Sahagian, Dork

    2016-07-18

    Characterizing precipitation seasonality and variability in the face of future uncertainty is important for a well-informed climate change adaptation strategy. Using the Colwell index of predictability and monthly normalized precipitation data from the Coupled Model Intercomparison Project Phase 5 (CMIP5) multi-model ensembles, this study identifies spatial hotspots of changes in precipitation predictability in the United States under various climate scenarios. Over the historic period (1950-2005), the recurrent pattern of precipitation is highly predictable in the East and along the coastal Northwest, and is less so in the arid Southwest. Comparing the future (2040-2095) to the historic period, larger changes in precipitation predictability are observed under Representative Concentration Pathways (RCP) 8.5 than those under RCP 4.5. Finally, there are region-specific hotspots of future changes in precipitation predictability, and these hotspots often coincide with regions of little projected change in total precipitation, with exceptions along the wetter East and parts of the drier central West. Therefore, decision-makers are advised to not rely on future total precipitation as an indicator of water resources. Changes in precipitation predictability and the subsequent changes on seasonality and variability are equally, if not more, important factors to be included in future regional environmental assessment.

  6. Application of physical scaling towards downscaling climate model precipitation data

    NASA Astrophysics Data System (ADS)

    Gaur, Abhishek; Simonovic, Slobodan P.

    2018-04-01

    Physical scaling (SP) method downscales climate model data to local or regional scales taking into consideration physical characteristics of the area under analysis. In this study, multiple SP method based models are tested for their effectiveness towards downscaling North American regional reanalysis (NARR) daily precipitation data. Model performance is compared with two state-of-the-art downscaling methods: statistical downscaling model (SDSM) and generalized linear modeling (GLM). The downscaled precipitation is evaluated with reference to recorded precipitation at 57 gauging stations located within the study region. The spatial and temporal robustness of the downscaling methods is evaluated using seven precipitation based indices. Results indicate that SP method-based models perform best in downscaling precipitation followed by GLM, followed by the SDSM model. Best performing models are thereafter used to downscale future precipitations made by three global circulation models (GCMs) following two emission scenarios: representative concentration pathway (RCP) 2.6 and RCP 8.5 over the twenty-first century. The downscaled future precipitation projections indicate an increase in mean and maximum precipitation intensity as well as a decrease in the total number of dry days. Further an increase in the frequency of short (1-day), moderately long (2-4 day), and long (more than 5-day) precipitation events is projected.

  7. Disordered amorphous calcium carbonate from direct precipitation

    DOE PAGES

    Farhadi Khouzani, Masoud; Chevrier, Daniel M.; Güttlein, Patricia; ...

    2015-06-01

    Amorphous calcium carbonate (ACC) is known to play a prominent role in biomineralization. Different studies on the structure of biogenic ACCs have illustrated that they can have distinct short-range orders. However, the origin of so-called proto-structures in synthetic and additive-free ACCs is not well understood. In the current work, ACC has been synthesised in iso-propanolic media by direct precipitation from ionic precursors, and analysed utilising a range of different techniques. The data suggest that this additive-free type of ACC does not resemble clear proto-structural motifs relating to any crystalline polymorph. This can be explained by the undefined pH value inmore » iso-propanolic media, and the virtually instantaneous precipitation. Altogether, this work suggests that aqueous systems and pathways involving pre-nucleation clusters are required for the generation of clear proto-structural features in ACC. Experiments on the ACC-to-crystalline transformation in solution with and without ethanol highlight that polymorph selection is under kinetic control, while the presence of ethanol can control dissolution re-crystallisation pathways.« less

  8. Negative cerium anomalies in manganese (hydr)oxide precipitates due to cerium oxidation in the presence of dissolved siderophores

    NASA Astrophysics Data System (ADS)

    Kraemer, Dennis; Tepe, Nathalie; Pourret, Olivier; Bau, Michael

    2017-01-01

    We present experimental results on the sorption behavior of rare earth elements and yttrium (REY) on precipitating manganese (hydr)oxide in the presence of the biogenic siderophore desferrioxamine B (DFOB). In marked contrast to inorganic systems, where preferential adsorption of HREY and depletion of LREY is commonly observed in manganese (hydr)oxide precipitates, sorption of REY in presence of the DFOB siderophore leads to HREY-depleted and LREY-enriched patterns in the precipitates. Moreover, our data indicate that surface oxidation of Ce(III) to Ce(IV) during sorption onto manganese (hydr)oxides and the resulting development of a positive Ce anomaly, which are commonly observed in inorganic experiments, are prevented in the presence of DFOB. Instead, Ce(III) is oxidized to Ce(IV) but associated with the dissolved desferrioxamine B which forms complexes with Ce(IV), that are at least twenty orders of magnitude more stable than those with Ce(III) and REY(III). The overall result is the formation of a positive Ce anomaly in the solution and a negative Ce anomaly in the Mn (hydr)oxides. The distribution of the strictly trivalent REY and Eu(III) between the manganese (hydr)oxide phase and the remaining ambient solution mimics the distribution of published stability constants for complexes of REY(III) with DFOB, i.e. the heavy REY form more stable complexes with the ligand and hence are better shielded from sorption than the LREY. Surface complexation modeling corroborates our experimental results. Negative Ce anomalies in Mn precipitates have been described from biogenic Mn oxides. Our results provide experimental evidence for the development of negative Ce anomalies in abiogenic Mn (hydr)oxide precipitates and show that the presence of the widespread siderophore desferrioxamine B during mineral precipitation results in HREY-depleted Mn (hydr)oxides with negative Ce anomalies.

  9. Scaling Linguistic Characterization of Precipitation Variability

    NASA Astrophysics Data System (ADS)

    Primo, C.; Gutierrez, J. M.

    2003-04-01

    Rainfall variability is influenced by changes in the aggregation of daily rainfall. This problem is of great importance for hydrological, agricultural and ecological applications. Rainfall averages, or accumulations, are widely used as standard climatic parameters. However different aggregation schemes may lead to the same average or accumulated values. In this paper we present a fractal method to characterize different aggregation schemes. The method provides scaling exponents characterizing weekly or monthly rainfall patterns for a given station. To this aim, we establish an analogy with linguistic analysis, considering precipitation as a discrete variable (e.g., rain, no rain). Each weekly, or monthly, symbolic precipitation sequence of observed precipitation is then considered as a "word" (in this case, a binary word) which defines a specific weekly rainfall pattern. Thus, each site defines a "language" characterized by the words observed in that site during a period representative of the climatology. Then, the more variable the observed weekly precipitation sequences, the more complex the obtained language. To characterize these languages, we first applied the Zipf's method obtaining scaling histograms of rank ordered frequencies. However, to obtain significant exponents, the scaling must be maintained some orders of magnitude, requiring long sequences of daily precipitation which are not available at particular stations. Thus this analysis is not suitable for applications involving particular stations (such as regionalization). Then, we introduce an alternative fractal method applicable to data from local stations. The so-called Chaos-Game method uses Iterated Function Systems (IFS) for graphically representing rainfall languages, in a way that complex languages define complex graphical patterns. The box-counting dimension and the entropy of the resulting patterns are used as linguistic parameters to quantitatively characterize the complexity of the patterns. We illustrate the high climatological discrimination power of the linguistic parameters in the Iberian peninsula, when compared with other standard techniques (such as seasonal mean accumulated precipitation). As an example, standard and linguistic parameters are used as inputs for a clustering regionalization method, comparing the resulting clusters.

  10. Self-limiting advection caused by the development of a dissolution/precipitation zone and implications for the fate of leaky wells in CO2 sequestration

    NASA Astrophysics Data System (ADS)

    Huerta, N. J.; Hesse, M. A.; Bryant, S. L.; Strazisar, B. R.

    2013-12-01

    Leaking wells that penetrate a geologic CO2 sequestration site provide a potential direct pathway for the escape of CO2 to an overlying aquifer or even back into the atmosphere. Leakage is a highly coupled system, involving transport of CO2-saturated brine and reaction of carbonic acid with the cement that encases wells. Carbonic acid attacks cement phases to dissolve calcium rich components and raise the fluid pH. Our experiments show that total dissolution of the cement matrix, which would lead to self-enhancing leakage, is prevented by an amorphous aluminosilicate phase that remains after dissolution to constrain fluid flux. Conversely, self-limiting behavior develops in a zone where pH is sufficiently high for carbonate minerals to become insoluble and precipitate. Extrapolation of these bench-scale observations indicates that a barrier of carbonate precipitation would develop as more CO2-saturated brine leaks along a well. The process of sealing of the pathway and the timescale of sealing are critical for any risk assessment of the sequestration operation. Using numerical models to interpret the experiments, we find a lag in self-limiting behavior which is controlled by the saturation state of carbonate phases. Sufficient residence time is crucial for the development of the precipitation zone. Precipitation need not seal uniformly across an entire fracture, only in dominant flow paths. Simply growing the width of a zone of precipitation is insufficient to capture the self-limiting behavior we observe in experiments. To seal, the precipitating material must also accumulate and grow into the open fracture space and close the aperture. Closure rate is a function of the initial leak path conductivity, pressure differential (which controls fluid flux), leak path length, and CO2-saturation in the brine. Combining these results with risk assessment tools that incorporate the well development history will give stakeholders a tool to quantitatively predict well leakage for candidate sites.

  11. Using New Theory and Experimental Methods to Understand the Relative Controls of Storage, Antecedent Conditions and Precipitation Intensity on Transit Time Distributions through a Sloping Soil Lysimeter

    NASA Astrophysics Data System (ADS)

    Kim, M.; Pangle, L. A.; Cardoso, C.; Lora, M.; Wang, Y.; Harman, C. J.; Troch, P. A. A.

    2014-12-01

    Transit time distributions (TTD) are an efficient way of characterizing transport through the complex flow dynamics of a hydrologic system, and can serve as a basis for spatially-integrated solute transport modeling. Recently there has been progress in the development of a theory of time-variable TTDs that captures the effect of temporal variability in the timing of fluxes as well as changes in flow pathways. Furthermore, a new formulation of this theory allows the essential transport properties of a system to be parameterized by a physically meaningful time-variable probability distribution, the Ω function. This distribution determines how the age distribution of water in storage is sampled by the outflow. The form of the Ω function varies if the flow pathways change, but is not determined by the timing of fluxes (unlike the TTD). In this study, we use this theory to characterize transport by transient flows through a homogeneously packed 1 m3 sloping soil lysimeter. The transit time distribution associated with each of four irrigation periods (repeated daily for 24 days) are compared to examine the significance of changes in the Ω function due to variations in total storage, antecedent conditions, and precipitation intensity. We observe both the time-variable TTD and the Ω function experimentally by applying the PERTH method (Harman and Kim, 2014, GRL, 41, 1567-1575). The method allows us to observe multiple overlapping time-variable TTD in controlled experiments using only two conservative tracers. We hypothesize that both the TTD and the Ω function will vary in time, even in this small scale, because water will take different flow pathways depending on the initial state of the lysimeter and irrigation intensity. However, based on primarily modeling, we conjecture that major variability in the Ω function will be limited to a period during and immediately after each irrigation. We anticipate the Ω function is almost time-invariant (or scales simply with total storage) during the recession period because flow pathways are stable during this period. This is one of the first experimental studies of this type, and the results offer insights into solute transport in transient, variably-saturated systems.

  12. Heavy precipitation in a changing climate: Does short-term summer precipitation increase faster?

    NASA Astrophysics Data System (ADS)

    Ban, Nikolina; Schmidli, Juerg; Schär, Christoph

    2015-02-01

    Climate models project that heavy precipitation events intensify with climate change. It is generally accepted that extreme day-long events will increase at a rate of about 6-7% per degree warming, consistent with the Clausius-Clapeyron relation. However, recent studies suggest that subdaily (e.g., hourly) precipitation extremes may increase at about twice this rate. Conventional climate models are not suited to assess such events, due to the limited spatial resolution and the need to parametrize convective precipitation (i.e., thunderstorms and rain showers). Here we employ a convection-resolving model using a horizontal grid spacing of 2.2 km across an extended region covering the Alps and its larger-scale surrounding from northern Italy to northern Germany. Consistent with previous results, projections using a Representative Concentration Pathways version 8.5 greenhouse gas scenario reveal a significant decrease of mean summer precipitation. However, unlike previous studies, we find that both extreme day-long and hour-long precipitation events asymptotically intensify with the Clausius-Clapeyron relation. Differences to previous studies might be due to the model or region considered, but we also show that it is inconsistent to extrapolate from present-day precipitation scaling into the future.

  13. Patterns of Precipitation and Streamflow Responses to Moisture Fluxes during Atmospheric Rivers

    NASA Astrophysics Data System (ADS)

    Henn, B. M.; Wilson, A. M.; Asgari Lamjiri, M.; Ralph, M.

    2017-12-01

    Precipitation from landfalling atmospheric rivers (ARs) have been shown to dominate the hydroclimate of many parts of the world. ARs are associated with saturated, neutrally-stable profiles in the lower atmosphere, in which forced ascent by topography induces precipitation. Understanding the spatial and temporal variability of precipitation over complex terrain during AR-driven precipitation is critical for accurate forcing of distributed hydrologic models and streamflow forecasts. Past studies using radar wind profilers and radiosondes have demonstrated predictability of precipitation rates based on upslope water vapor flux over coastal terrain, with certain levels of moisture flux exhibiting the greatest influence on precipitation. Additionally, these relationships have been extended to show that streamflow in turn responds predictably to upslope vapor flux. However, past studies have focused on individual pairs of profilers and precipitation gauges; the question of how orographic precipitation in ARs is distributed spatially over complex terrain, at different topographic scales, is less well known. Here, we examine profiles of atmospheric moisture transport from radiosondes and wind profilers, against a relatively dense network of precipitation gauges, as well as stream gauges, to assess relationships between upslope moisture flux and the spatial response of precipitation and streamflow. We focus on California's Russian River watershed in the 2016-2017 cool season, when regular radiosonde launches were made at two locations during an active sequence of landfalling ARs. We examine how atmospheric water vapor flux results in precipitation patterns across gauges with different topographic relationships to the prevailing moisture-bearing winds, and conduct a similar comparison of runoff volume response from several unimpaired watersheds in the upper Russian watershed, taking into account antecedent soil moisture conditions that influence runoff generation. Finally, we compare observed spatial patterns of precipitation accumulations to those in a topographically-aided gridded precipitation dataset to understand how atmospheric moisture transport may inform methods to downscale precipitation to high resolution for use in hydrologic modeling.

  14. Optimization of Formaldehyde Cross-Linking for Protein Interaction Analysis of Non-Tagged Integrin β1

    PubMed Central

    Klockenbusch, Cordula; Kast, Juergen

    2010-01-01

    Formaldehyde cross-linking of protein complexes combined with immunoprecipitation and mass spectrometry analysis is a promising technique for analysing protein-protein interactions, including those of transient nature. Here we used integrin β1 as a model to describe the application of formaldehyde cross-linking in detail, particularly focusing on the optimal parameters for cross-linking, the detection of formaldehyde cross-linked complexes, the utility of antibodies, and the identification of binding partners. Integrin β1 was found in a high molecular weight complex after formaldehyde cross-linking. Eight different anti-integrin β1 antibodies were used for pull-down experiments and no loss in precipitation efficiency after cross-linking was observed. However, two of the antibodies could not precipitate the complex, probably due to hidden epitopes. Formaldehyde cross-linked complexes, precipitated from Jurkat cells or human platelets and analyzed by mass spectrometry, were found to be composed of integrin β1, α4 and α6 or β1, α6, α2, and α5, respectively. PMID:20634879

  15. New insights into saline water evaporation from porous media: Complex interaction between evaporation rates, precipitation, and surface temperature

    NASA Astrophysics Data System (ADS)

    Shokri-Kuehni, Salomé M. S.; Vetter, Thomas; Webb, Colin; Shokri, Nima

    2017-06-01

    Understanding salt transport and deposition patterns during evaporation from porous media is important in many engineering and hydrological processes such as soil salinization, ecosystem functioning, and land-atmosphere interaction. As evaporation proceeds, salt concentration increases until it exceeds solubility limits, locally, and crystals precipitate. The interplay between transport processes, crystallization, and evaporation influences where crystallization occurs. During early stages, the precipitated salt creates an evolving porous structure affecting the evaporation kinetics. We conducted a comprehensive series of experiments to investigate how the salt concentration and precipitation influence evaporation dynamics. Our results illustrate the contribution of the evolving salt crust to the evaporative mass losses. High-resolution thermal imaging enabled us to investigate the complex temperature dynamics at the surface of precipitated salt, providing further confirmation of salt crust contribution to the evaporation. We identify different phases of saline water evaporation from porous media with the corresponding dominant mechanisms in each phase and extend the physical understanding of such processes.

  16. Impacts of detrital nano- and micro-scale particles (dNP) on contaminant dynamics in a coal mine AMD treatment system.

    PubMed

    Lefticariu, Liliana; Sutton, Stephen R; Bender, Kelly S; Lefticariu, Mihai; Pentrak, Martin; Stucki, Joseph W

    2017-01-01

    Pollutants in acid mine drainage (AMD) are usually sequestered in neoformed nano- and micro-scale particles (nNP) through precipitation, co-precipitation, and sorption. Subsequent biogeochemical processes may control nNP stability and thus long-term contaminant immobilization. Mineralogical, chemical, and microbiological data collected from sediments accumulated over a six-year period in a coal-mine AMD treatment system were used to identify the pathways of contaminant dynamics. We present evidence that detrital nano- and micron-scale particles (dNP), composed mostly of clay minerals originating from the partial weathering of coal-mine waste, mediated biogeochemical processes that catalyzed AMD contaminant (1) immobilization by facilitating heterogeneous nucleation and growth of nNP in oxic zones, and (2) remobilization by promoting phase transformation and reductive dissolution of nNP in anoxic zones. We found that dNP were relatively stable under acidic conditions and estimated a dNP content of ~0.1g/L in the influent AMD. In the AMD sediments, the initial nNP precipitates were schwertmannite and poorly crystalline goethite, which transformed to well-crystallized goethite, the primary nNP repository. Subsequent reductive dissolution of nNP resulted in the remobilization of up to 98% of S and 95% of Fe accompanied by the formation of a compact dNP layer. Effective treatment of pollutants could be enhanced by better understanding the complex, dynamic role dNP play in mediating biogeochemical processes and contaminant dynamics at coal-mine impacted sites. Copyright © 2016 Elsevier B.V. All rights reserved.

  17. A decision tree algorithm for investigation of model biases related to dynamical cores and physical parameterizations: CESM/CAM EVALUATION BY DECISION TREES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Soner Yorgun, M.; Rood, Richard B.

    An object-based evaluation method using a pattern recognition algorithm (i.e., classification trees) is applied to the simulated orographic precipitation for idealized experimental setups using the National Center of Atmospheric Research (NCAR) Community Atmosphere Model (CAM) with the finite volume (FV) and the Eulerian spectral transform dynamical cores with varying resolutions. Daily simulations were analyzed and three different types of precipitation features were identified by the classification tree algorithm. The statistical characteristics of these features (i.e., maximum value, mean value, and variance) were calculated to quantify the difference between the dynamical cores and changing resolutions. Even with the simple and smoothmore » topography in the idealized setups, complexity in the precipitation fields simulated by the models develops quickly. The classification tree algorithm using objective thresholding successfully detected different types of precipitation features even as the complexity of the precipitation field increased. The results show that the complexity and the bias introduced in small-scale phenomena due to the spectral transform method of CAM Eulerian spectral dynamical core is prominent, and is an important reason for its dissimilarity from the FV dynamical core. The resolvable scales, both in horizontal and vertical dimensions, have significant effect on the simulation of precipitation. The results of this study also suggest that an efficient and informative study about the biases produced by GCMs should involve daily (or even hourly) output (rather than monthly mean) analysis over local scales.« less

  18. A decision tree algorithm for investigation of model biases related to dynamical cores and physical parameterizations: CESM/CAM EVALUATION BY DECISION TREES

    DOE PAGES

    Soner Yorgun, M.; Rood, Richard B.

    2016-11-11

    An object-based evaluation method using a pattern recognition algorithm (i.e., classification trees) is applied to the simulated orographic precipitation for idealized experimental setups using the National Center of Atmospheric Research (NCAR) Community Atmosphere Model (CAM) with the finite volume (FV) and the Eulerian spectral transform dynamical cores with varying resolutions. Daily simulations were analyzed and three different types of precipitation features were identified by the classification tree algorithm. The statistical characteristics of these features (i.e., maximum value, mean value, and variance) were calculated to quantify the difference between the dynamical cores and changing resolutions. Even with the simple and smoothmore » topography in the idealized setups, complexity in the precipitation fields simulated by the models develops quickly. The classification tree algorithm using objective thresholding successfully detected different types of precipitation features even as the complexity of the precipitation field increased. The results show that the complexity and the bias introduced in small-scale phenomena due to the spectral transform method of CAM Eulerian spectral dynamical core is prominent, and is an important reason for its dissimilarity from the FV dynamical core. The resolvable scales, both in horizontal and vertical dimensions, have significant effect on the simulation of precipitation. The results of this study also suggest that an efficient and informative study about the biases produced by GCMs should involve daily (or even hourly) output (rather than monthly mean) analysis over local scales.« less

  19. Salen complexes with dianionic counterions

    DOEpatents

    Job, Gabriel E.; Farmer, Jay J.; Cherian, Anna E.

    2016-08-02

    The present invention describes metal salen complexes having dianionic counterions. Such complexes can be readily precipitated and provide an economical method for the purification and isolation of the complexes, and are useful to prepare novel polymer compositions.

  20. Decontamination and Disposal Methods for Chemical Agents - A Literature Survey

    DTIC Science & Technology

    1982-11-01

    aqueous copper (I) ammonia complex to give a red copper (1) acetylide precipitate. The precipitate was determined either iodometricaily (sensitivity of I...ppm in decontamination solution) or colorintrically by a copper (11) ammonia complex (12 ppm). Lewisite was also assayed by gas liquid chromatography...to ammonia (then degraded to nitrogen) and carbonate ion. The latter reaction is relatively slow. The reaction may thus be con- sidered to consist of

  1. Modelling Precipitation and Temperature Extremes: The Importance of Horizontal Resolution

    NASA Astrophysics Data System (ADS)

    Shields, C. A.; Kiehl, J. T.; Meehl, G. A.

    2013-12-01

    Understanding Earth's water cycle on a warming planet is of critical importance in society's ability to adapt to climate change. Extreme weather events, such as floods, heat waves, and drought will likely change with the water cycle as greenhouse gases continue to rise. Location, duration, and intensity of extreme events can be studied using complex earth system models. Here, we employ the fully coupled Community Earth System Model (CESM1.0) to evaluate extreme event impacts for different possible future forcing scenarios. Simulations applying the Representative Concentration Pathway (RCP) scenarios 2.6 and 8.5 were chosen to bracket the range of model responses. Because extreme weather events happen on a regional scale, there is a tendency to favor using higher resolution models, i.e. models that can represent regional features with greater accuracy. Within the CESM1.0 framework, we evaluate both the standard 1 degree resolution (1 degree atmosphere/land coupled to 1 degree ocean/sea ice), and the higher 0.5 degree resolution version (0.5 degree atmosphere/land coupled to 1 degree ocean/sea ice), focusing on extreme precipitation events, heat waves, and droughts. We analyze a variety of geographical regions, but generally find that benefits from increased horizontal resolution are most significant on the regional scale.

  2. Characterization of the stromatolite microbiome from Little Darby Island, The Bahamas using predictive and whole shotgun metagenomic analysis.

    PubMed

    Casaburi, Giorgio; Duscher, Alexandrea A; Reid, R Pamela; Foster, Jamie S

    2016-05-01

    Modern stromatolites represent ideal ecosystems to understand the biological processes required for the precipitation of carbonate due to their long evolutionary history and occurrence in a wide range of habitats. However, most of the prior molecular work on stromatolites has focused on understanding the taxonomic complexity and not fully elucidating the functional capabilities of these systems. Here, we begin to characterize the microbiome associated with stromatolites of Little Darby Island, The Bahamas using predictive metagenomics of the 16S rRNA gene coupled with direct whole shotgun sequencing. The metagenomic analysis of the Little Darby stromatolites revealed many shared taxa and core pathways associated with biologically induced carbonate precipitation, suggesting functional convergence within Bahamian stromatolites. A comparison of the Little Darby stromatolites with other lithifying microbial ecosystems also revealed that although factors, such as geographic location and salinity, do drive some differences within the population, there are extensive similarities within the microbial populations. These results suggest that for stromatolite formation, 'who' is in the community is not as critical as metabolic activities and environmental interactions. Together, these analyses help improve our understanding of the similarities among lithifying ecosystems and provide an important first step in characterizing the shared microbiome of modern stromatolites. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

  3. Coupled impacts of climate and land use change across a river-lake continuum: insights from an integrated assessment model of Lake Champlain’s Missisquoi Basin, 2000-2040

    NASA Astrophysics Data System (ADS)

    Zia, Asim; Bomblies, Arne; Schroth, Andrew W.; Koliba, Christopher; Isles, Peter D. F.; Tsai, Yushiou; Mohammed, Ibrahim N.; Bucini, Gabriela; Clemins, Patrick J.; Turnbull, Scott; Rodgers, Morgan; Hamed, Ahmed; Beckage, Brian; Winter, Jonathan; Adair, Carol; Galford, Gillian L.; Rizzo, Donna; Van Houten, Judith

    2016-11-01

    Global climate change (GCC) is projected to bring higher-intensity precipitation and higher-variability temperature regimes to the Northeastern United States. The interactive effects of GCC with anthropogenic land use and land cover changes (LULCCs) are unknown for watershed level hydrological dynamics and nutrient fluxes to freshwater lakes. Increased nutrient fluxes can promote harmful algal blooms, also exacerbated by warmer water temperatures due to GCC. To address the complex interactions of climate, land and humans, we developed a cascading integrated assessment model to test the impacts of GCC and LULCC on the hydrological regime, water temperature, water quality, bloom duration and severity through 2040 in transnational Lake Champlain’s Missisquoi Bay. Temperature and precipitation inputs were statistically downscaled from four global circulation models (GCMs) for three Representative Concentration Pathways. An agent-based model was used to generate four LULCC scenarios. Combined climate and LULCC scenarios drove a distributed hydrological model to estimate river discharge and nutrient input to the lake. Lake nutrient dynamics were simulated with a 3D hydrodynamic-biogeochemical model. We find accelerated GCC could drastically limit land management options to maintain water quality, but the nature and severity of this impact varies dramatically by GCM and GCC scenario.

  4. Characterization of the stromatolite microbiome from Little Darby Island, The Bahamas using predictive and whole shotgun metagenomic analysis

    PubMed Central

    Casaburi, Giorgio; Duscher, Alexandrea A.; Reid, R. Pamela; Foster, Jamie S.

    2018-01-01

    Summary Modern stromatolites represent ideal ecosystems to understand the biological processes required for the precipitation of carbonate due to their long evolutionary history and occurrence in a wide range of habitats. However, most of the prior molecular work on stromatolites has focused on understanding the taxonomic complexity and not fully elucidating the functional capabilities of these systems. Here, we begin to characterize the microbiome associated with stromatolites of Little Darby Island, The Bahamas using predictive metagenomics of the 16S rRNA gene coupled with direct whole shotgun sequencing. The metagenomic analysis of the Little Darby stromatolites revealed many shared taxa and core pathways associated with biologically induced carbonate precipitation, suggesting functional convergence within Bahamian stromatolites. A comparison of the Little Darby stromatolites with other lithifying microbial ecosystems also revealed that although factors, such as geographic location and salinity, do drive some differences within the population, there are extensive similarities within the microbial populations. These results suggest that for stromatolite formation, ‘who’ is in the community is not as critical as metabolic activities and environmental interactions. Together, these analyses help improve our understanding of the similarities among lithifying ecosystems and provide an important first step in characterizing the shared microbiome of modern stromatolites. PMID:26471001

  5. On the Value of Climate Elasticity Indices to Assess the Impact of Climate Change on Streamflow Projection using an ensemble of bias corrected CMIP5 dataset

    NASA Astrophysics Data System (ADS)

    Demirel, Mehmet; Moradkhani, Hamid

    2015-04-01

    Changes in two climate elasticity indices, i.e. temperature and precipitation elasticity of streamflow, were investigated using an ensemble of bias corrected CMIP5 dataset as forcing to two hydrologic models. The Variable Infiltration Capacity (VIC) and the Sacramento Soil Moisture Accounting (SAC-SMA) hydrologic models, were calibrated at 1/16 degree resolution and the simulated streamflow was routed to the basin outlet of interest. We estimated precipitation and temperature elasticity of streamflow from: (1) observed streamflow; (2) simulated streamflow by VIC and SAC-SMA models using observed climate for the current climate (1963-2003); (3) simulated streamflow using simulated climate from 10 GCM - CMIP5 dataset for the future climate (2010-2099) including two concentration pathways (RCP4.5 and RCP8.5) and two downscaled climate products (BCSD and MACA). The streamflow sensitivity to long-term (e.g., 30-year) average annual changes in temperature and precipitation is estimated for three periods i.e. 2010-40, 2040-70 and 2070-99. We compared the results of the three cases to reflect on the value of precipitation and temperature indices to assess the climate change impacts on Columbia River streamflow. Moreover, these three cases for two models are used to assess the effects of different uncertainty sources (model forcing, model structure and different pathways) on the two climate elasticity indices.

  6. Precipitation characteristics of uranyl ions at different pHs depending on the presence of carbonate ions and hydrogen peroxide.

    PubMed

    Kim, Kwang-Wook; Kim, Yeon-Hwa; Lee, Se-yoon; Lee, Jae-Won; Joe, Kih-Soo; Lee, Eil-Hee; Kim, Jong-Seung; Song, Kyuseok; Song, Kee-Chan

    2009-04-01

    This work studied the dissolution of uranium dioxide and precipitation characteristics of uranyl ions in alkaline and acidic solutions depending on the presence of carbonate ions and H2O2 in the solutions at different pHs controlled by adding HNO3 or NaOH in the solution. The chemical structures of the precipitates generated in different conditions were evaluated and compared by using XRD, SEM, TG-DT, and IR analyses together. The sizes and forms of the precipitates in the solutions were evaluated, as well. The uranyl ions were precipitated in the various forms, depending on the solution pH and the presences of hydrogen peroxide and carbonate ions in the solution. In a 0.5 M Na2CO3 solution with H2O2, where the uranyl ions formed mixed uranyl peroxy-carbonato complexes, the uranyl ions were precipitated as a uranium peroxide of UO4(H20)4 at pH 3-4, and precipitated as a clarkeite of Na2U2Ox(OH)y(H2O)z above pH 13. In the same carbonate solution without H2O2, where the uranyl ions formed uranyl tris-carbonato complex, the uranyl ions were observed to be precipitated as a different form of clarkeite above pH 13. The precipitate of uranyl ions in a nitrate solution without carbonate ions and H2O2 at a high pH were studied together to compare the precipitate forms in the carbonate solutions.

  7. Short-range prediction of a heavy precipitation event by assimilating Chinese CINRAD-SA radar reflectivity data using complex cloud analysis

    NASA Astrophysics Data System (ADS)

    Sheng, C.; Gao, S.; Xue, M.

    2006-11-01

    With the ARPS (Advanced Regional Prediction System) Data Analysis System (ADAS) and its complex cloud analysis scheme, the reflectivity data from a Chinese CINRAD-SA Doppler radar are used to analyze 3D cloud and hydrometeor fields and in-cloud temperature and moisture. Forecast experiments starting from such initial conditions are performed for a northern China heavy rainfall event to examine the impact of the reflectivity data and other conventional observations on short-range precipitation forecast. The full 3D cloud analysis mitigates the commonly known spin-up problem with precipitation forecast, resulting a significant improvement in precipitation forecast in the first 4 to 5 hours. In such a case, the position, timing and amount of precipitation are all accurately predicted. When the cloud analysis is used without in-cloud temperature adjustment, only the forecast of light precipitation within the first hour is improved. Additional analysis of surface and upper-air observations on the native ARPS grid, using the 1 degree real-time NCEP AVN analysis as the background, helps improve the location and intensity of rainfall forecasting slightly. Hourly accumulated rainfall estimated from radar reflectivity data is found to be less accurate than the model predicted precipitation when full cloud analysis is used.

  8. Evaluation of flash-flood discharge forecasts in complex terrain using precipitation

    USGS Publications Warehouse

    Yates, D.; Warner, T.T.; Brandes, E.A.; Leavesley, G.H.; Sun, Jielun; Mueller, C.K.

    2001-01-01

    Operational prediction of flash floods produced by thunderstorm (convective) precipitation in mountainous areas requires accurate estimates or predictions of the precipitation distribution in space and time. The details of the spatial distribution are especially critical in complex terrain because the watersheds are generally small in size, and small position errors in the forecast or observed placement of the precipitation can distribute the rain over the wrong watershed. In addition to the need for good precipitation estimates and predictions, accurate flood prediction requires a surface-hydrologic model that is capable of predicting stream or river discharge based on the precipitation-rate input data. Different techniques for the estimation and prediction of convective precipitation will be applied to the Buffalo Creek, Colorado flash flood of July 1996, where over 75 mm of rain from a thunderstorm fell on the watershed in less than 1 h. The hydrologic impact of the precipitation was exacerbated by the fact that a significant fraction of the watershed experienced a wildfire approximately two months prior to the rain event. Precipitation estimates from the National Weather Service's operational Weather Surveillance Radar-Doppler 1988 and the National Center for Atmospheric Research S-band, research, dual-polarization radar, colocated to the east of Denver, are compared. In addition, very short range forecasts from a convection-resolving dynamic model, which is initialized variationally using the radar reflectivity and Doppler winds, are compared with forecasts from an automated-algorithmic forecast system that also employs the radar data. The radar estimates of rain rate, and the two forecasting systems that employ the radar data, have degraded accuracy by virtue of the fact that they are applied in complex terrain. Nevertheless, the radar data and forecasts from the dynamic model and the automated algorithm could be operationally useful for input to surface-hydrologic models employed for flood warning. Precipitation data provided by these various techniques at short time scales and at fine spatial resolutions are employed as detailed input to a distributed-parameter hydrologic model for flash-flood prediction and analysis. With the radar-based precipitation estimates employed as input, the simulated flood discharge was similar to that observed. The dynamic-model precipitation forecast showed the most promise in providing a significant discharge-forecast lead time. The algorithmic system's precipitation forecast did not demonstrate as much skill, but the associated discharge forecast would still have been sufficient to have provided an alert of impending flood danger.

  9. Modeling Rainfall-Runoff Dynamics in Tropical, Urban Socio-Hydrological Systems: Green Infrastructure and Variable Precipitation Interception

    NASA Astrophysics Data System (ADS)

    Nytch, C. J.; Meléndez-Ackerman, E. J.

    2014-12-01

    There is a pressing need to generate spatially-explicit models of rainfall-runoff dynamics in the urban humid tropics that can characterize flow pathways and flood magnitudes in response to erratic precipitation events. To effectively simulate stormwater runoff processes at multiple scales, complex spatio-temporal parameters such as rainfall, evapotranspiration, and antecedent soil moisture conditions must be accurately represented, in addition to uniquely urban factors including stormwater conveyance structures and connectivity between green and gray infrastructure elements. In heavily urbanized San Juan, Puerto Rico, stream flashiness and frequent flooding are major issues, yet still lacking is a hydrological analysis that models the generation and movement of fluvial and pluvial stormwater through the watershed. Our research employs a novel and multifaceted approach to dealing with this problem that integrates 1) field-based rainfall interception and infiltration methodologies to quantify the hydrologic functions of natural and built infrastructure in San Juan; 2) remote sensing analysis to produce a fine-scale typology of green and gray cover types in the city and determine patterns of spatial distribution and connectivity; 3) assessment of precipitation and streamflow variability at local and basin-wide scales using satellite and radar precipitation estimates in concert with rainfall and stream gauge point data and participatory flood mapping; 4) simulation of historical, present-day, and future stormwater runoff scenarios with a fully distributed hydrologic model that couples diverse components of urban socio-hydrological systems from formal and informal knowledge sources; and 5) bias and uncertainty analysis of parameters and model structure within a Bayesian hierarchical framework. Preliminary results from the rainfall interception study suggest that canopy structure and leaf area index of different tree species contribute to variable throughfall and stemflow responses. Additional investigations are pending. The findings from this work will help inform urban planning and design, and build adaptive capacity to reduce flood vulnerability in the context of a changing climate.

  10. 21st Century Changes in Precipitation Extremes Based on Resolved Atmospheric Patterns

    NASA Astrophysics Data System (ADS)

    Gao, X.; Schlosser, C. A.; O'Gorman, P. A.; Monier, E.

    2014-12-01

    Global warming is expected to alter the frequency and/or magnitude of extreme precipitation events. Such changes could have substantial ecological, economic, and sociological consequences. However, climate models in general do not correctly reproduce the frequency distribution of precipitation, especially at the regional scale. In this study, a validated analogue method is employed to diagnose the potential future shifts in the probability of extreme precipitation over the United States under global warming. The method is based on the use of the resolved large-scale meteorological conditions (i.e. flow features, moisture supply) to detect the occurrence of extreme precipitation. The CMIP5 multi-model projections have been compiled for two radiative forcing scenarios (Representative Concentration Pathways 4.5 and 8.5). We further analyze the accompanying circulation features and their changes that may be responsible for shifts in extreme precipitation in response to changed climate. The application of such analogue method to detect other types of hazard events, i.e. landslides is also explored. The results from this study may guide hazardous weather watches and help society develop adaptive strategies for preventing catastrophic losses.

  11. Re-evaluating the Cloud Lifetime Effect: Does Precipitation Suppression Always Lead to an Increased Cloud Extent in Warm Clouds?

    NASA Astrophysics Data System (ADS)

    Douglas, A.; L'Ecuyer, T.

    2017-12-01

    Aerosol influences on cloud lifetime remain a poorly understood pathway of aerosol-cloud-radiation interaction with large margins of error according to the fifth IPCC report. Increases in cloud lifetime are attributed to changes in cloud extent due to the suppression of precipitation by increased aerosol concentrations. The dependence of changes in cloud fraction and probability of precipitation on aerosol perturbations for controlled cloud regimes will be investigated using A-Train measurements. CloudSat, MODIS, and AMSR-E measurements from 2006 to 2010 are sorted into regimes established using stability to describe local meteorology, and relative humidity and liquid water path to describe cloud morphology. Holding the thermodynamic and meteorological environments constant allows variations in precipitation and cloud extent owing to regime-specific cloud lifetime effects to be attributed to aerosol perturbations. The relationship between precipitation suppression, cloud extent, and liquid water path will be analyzed. The cloud lifetime effect will be constrained using regimes in the hopes of improving our understanding of precipitation-aerosol interactions.

  12. Isolation and preliminary characterization of circulating immune complexes from rabbits with experimental syphilis.

    PubMed Central

    Baughn, R E; Musher, D M

    1983-01-01

    Immune complexes isolated from sera of rabbits with experimental, disseminated syphilis were found to have sedimentation coefficients greater than 19s. By radioimmunoblot assays, materials precipitated with 2.5% polyethylene glycol or chromatographed on DEAE-Affi-Gel Blue were found to contain albumin, C3, immunoglobulin M (IgM), IgG, and treponemal antigen(s), whereas control materials contained only albumin and IgG. When polyethylene glycol precipitation of immune complexes from syphilitic rabbits was followed by immobilization on protein A and acid elution, radioimmunoblots detected only IgG and treponemal antigen(s). Images PMID:6358025

  13. Phosphate and phytate adsorption and precipitation on ferrihydrite surfaces

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, Xiaoming; Hu, Yongfeng; Tang, Yadong

    Phosphorous (P) sorption on mineral surfaces largely controls P mobility and bioavailability, hence its pollution potential, but the sorption speciation and mechanism remain poorly understood. In this study, we have identified and quantified the speciation of both phosphate and phytate sorbed on ferrihydrite with various P loadings at pH 3–8 using differential atomic pair distribution function (d-PDF) analysis, synchrotron-based X-ray diffraction (XRD), and P and Fe K-edge X-ray absorption near edge structure (XANES) and attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy. With increasing P sorption loading for both phosphate and phytate, the sorption mechanism transits from bidentate-binuclear surface complexation tomore » unidentified ternary complexation and to precipitation of amorphous FePO 4 and amorphous Fe-phytate. At a given P sorption loading, phosphate precipitates more readily than phytate. Both phosphate and phytate promote ferrihydrite dissolution with phytate more intensively, but the dissolved FeIII concentration in the bulk solution is low because the majority of the released Fe III precipitate with the anions. Results also show that amorphous FePO 4 and amorphous Fe-phytate have similar PO 4 local coordination environment. In conclusion, these new insights into the P surface complexation and precipitation, and the ligand-promoted dissolution behavior improve our understanding of P fate in soils, aquatic environment and water treatment systems as mediated by mineral-water interfacial reactions.« less

  14. Phosphate and phytate adsorption and precipitation on ferrihydrite surfaces

    DOE PAGES

    Wang, Xiaoming; Hu, Yongfeng; Tang, Yadong; ...

    2017-09-26

    Phosphorous (P) sorption on mineral surfaces largely controls P mobility and bioavailability, hence its pollution potential, but the sorption speciation and mechanism remain poorly understood. In this study, we have identified and quantified the speciation of both phosphate and phytate sorbed on ferrihydrite with various P loadings at pH 3–8 using differential atomic pair distribution function (d-PDF) analysis, synchrotron-based X-ray diffraction (XRD), and P and Fe K-edge X-ray absorption near edge structure (XANES) and attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy. With increasing P sorption loading for both phosphate and phytate, the sorption mechanism transits from bidentate-binuclear surface complexation tomore » unidentified ternary complexation and to precipitation of amorphous FePO 4 and amorphous Fe-phytate. At a given P sorption loading, phosphate precipitates more readily than phytate. Both phosphate and phytate promote ferrihydrite dissolution with phytate more intensively, but the dissolved FeIII concentration in the bulk solution is low because the majority of the released Fe III precipitate with the anions. Results also show that amorphous FePO 4 and amorphous Fe-phytate have similar PO 4 local coordination environment. In conclusion, these new insights into the P surface complexation and precipitation, and the ligand-promoted dissolution behavior improve our understanding of P fate in soils, aquatic environment and water treatment systems as mediated by mineral-water interfacial reactions.« less

  15. The Antibacterial Activity of Ga3+ Is Influenced by Ligand Complexation as Well as the Bacterial Carbon Source ▿ † ‡

    PubMed Central

    Rzhepishevska, Olena; Ekstrand-Hammarström, Barbro; Popp, Maximilian; Björn, Erik; Bucht, Anders; Sjöstedt, Anders; Antti, Henrik; Ramstedt, Madeleine

    2011-01-01

    Gallium ions have previously been shown to exhibit antibacterial and antibiofilm properties. In this study, we report differential bactericidal activities of two gallium complexes, gallium desferrioxamine B (Ga-DFOB) and gallium citrate (Ga-Cit). Modeling of gallium speciation in growth medium showed that DFOB and citrate both can prevent precipitation of Ga(OH)3, but some precipitation can occur above pH 7 with citrate. Despite this, Ga-Cit 90% inhibitory concentrations (IC90) were lower than those of Ga-DFOB for clinical isolates of Pseudomonas aeruginosa and several reference strains of other bacterial species. Treatment with Ga compounds mitigated damage inflicted on murine J774 macrophage-like cells infected with P. aeruginosa PAO1. Again, Ga-Cit showed more potent mitigation than did Ga-DFOB. Ga was also taken up more efficiently by P. aeruginosa in the form of Ga-Cit than in the form of Ga-DFOB. Neither Ga-Cit nor Ga-DFOB was toxic to several human cell lines tested, and no proinflammatory activity was detected in human lung epithelial cells after exposure in vitro. Metabolomic analysis was used to delineate the effects of Ga-Cit on the bacterial cell. Exposure to Ga resulted in lower concentrations of glutamate, a key metabolite for P. aeruginosa, and of many amino acids, indicating that Ga affects various biosynthesis pathways. An altered protein expression profile in the presence of Ga-Cit suggested that some compensatory mechanisms were activated in the bacterium. Furthermore, the antibacterial effect of Ga was shown to vary depending on the carbon source, which has importance in the context of medical applications of gallium. PMID:21947396

  16. Characteristics of Hydrothermal Mineralization in Ultraslow Spreading Ridges

    NASA Astrophysics Data System (ADS)

    Zhou, H.; Yang, Q.; Ji, F.; Dick, H. J.

    2014-12-01

    Hydrothermal activity is a major component of the processes that shape the composition and structure of the ocean crust, providing a major pathway for the exchange of heat and elements between the Earth's crust and oceans, and a locus for intense biological activity on the seafloor and underlying crust. In other hand, the structure and composition of hydrothermal systems are the result of complex interactions between heat sources, fluids, wall rocks, tectonic controls and even biological processes. Ultraslow spreading ridges, including the Southwest Indian Ridge, the Gakkel Ridge, are most remarkable end member in plate-boundary structures (Dick et al., 2003), featured with extensive tectonic amagmatic spreading and frequent exposure of peridotite and gabbro. With intensive surveys in last decades, it is suggested that ultraslow ridges are several times more effective than faster-spreading ridges in sustaining hydrothermal activities. This increased efficiency could attributed to deep mining of heat and even exothermic serpentinisation (Baker et al., 2004). Distinct from in faster spreading ridges, one characteristics of hydrothermal mineralization on seafloor in ultraslow spreading ridges, including the active Dragon Flag hydrothermal field at 49.6 degree of the Southwest Indian Ridge, is abundant and pervasive distribution of lower temperature precipitated minerals ( such as Fe-silica or silica, Mn (Fe) oxides, sepiolite, pyrite, marcasite etc. ) in hydrothermal fields. Structures formed by lower temperature activities in active and dead hydrothermal fields are also obviously. High temperature precipitated minerals such as chalcopyrite etc. are rare or very limited in hydrothermal chimneys. Distribution of diverse low temperature hydrothermal activities is consistence with the deep heating mechanisms and hydrothermal circulations in the complex background of ultraslow spreading tectonics. Meanwhile, deeper and larger mineralization at certain locations along the ultraslow spreading ridges is also presumable.

  17. Ternary complex formation of Eu(III) with o-phthalate in aqueous solutions.

    PubMed

    Park, K K; Jung, E C; Cho, H-R; Kim, W H

    2009-08-15

    Ternary hydroxo complex formation of Eu(III) with o-phthalate was investigated by potentiometry and fluorescence spectrophotometry. Curves of the equilibrium pH versus the amount of NaOH added showed that the pH value starting to form a Eu(III) precipitate was decreased due to the formation of a ternary hydroxo complex, EuOHL(s) (L = phthalate). The formation of EuOHL(s) was qualitatively confirmed by the enhancement of the fluorescence intensity of Eu(III) in the precipitate with the light absorbed by phthalate, and was quantitatively confirmed by the measurement of the amounts of Eu(III), OH(-) and phthalate included in the precipitate. The solubility product of EuOHL(s) was determined as pK(sp)(0) = 15.6+/-0.4. Characteristic features in the fluorescence spectra and the solubility product of the Eu(III)-phthalate complex were compared with those of the Eu(III)-PDA (PDA = pyridine-2,6-dicarboxylate) complex. The fluorescence intensity of the EuL(+) complex of L = PDA was about 11 times stronger than that of L = phthalate. The origin of the difference in the fluorescence intensity is discussed based on the intramolecular energy transfer effect from the lowest triplet energy level of the ligand to the resonance energy level of Eu(III).

  18. A Comparison of Multisensor Precipitation Estimation Methods in Complex Terrain for Flash Flood Warning and Mitigation

    NASA Astrophysics Data System (ADS)

    Cifelli, R.; Chen, H.; Chandrasekar, C. V.; Willie, D.; Reynolds, D.; Campbell, C.; Zhang, Y.; Sukovich, E.

    2012-12-01

    Investigating the uncertainties and improving the accuracy of quantitative precipitation estimation (QPE) is a critical mission of the National Oceanic and Atmospheric Administration (NOAA). QPE is extremely challenging in regions of complex terrain like the western U.S. because of the sparse coverage of ground-based radar, complex orographic precipitation processes, and the effects of beam blockages (e.g., Westrick et al. 1999). In addition, the rain gauge density in complex terrain is often inadequate to capture spatial variability in the precipitation patterns. The NOAA Hydrometeorology Testbed (HMT) conducts research on precipitation and weather conditions that can lead to flooding, and fosters transition of scientific advances and new tools into forecasting operations (see hmt.noaa.gov). The HMT program consists of a series of demonstration projects in different geographical regions to enhance understanding of region specific processes related to precipitation, including QPE. There are a number of QPE systems that are widely used across NOAA for precipitation estimation (e.g., Cifelli et al. 2011; Chandrasekar et al. 2012). Two of these systems have been installed at the NOAA Earth System Research Laboratory: Multisensor Precipitation Estimator (MPE) and National Mosaic and Multi-sensor QPE (NMQ) developed by NWS and NSSL, respectively. Both provide gridded QPE products that include radar-only, gauge-only and gauge-radar-merged, etc; however, these systems often provide large differences in QPE (in terms of amounts and spatial patterns) due to differences in Z-R selection, vertical profile of reflectivity correction, and gauge interpolation procedures. Determining the appropriate QPE product and quantification of QPE uncertainty is critical for operational applications, including water management decisions and flood warnings. For example, hourly QPE is used to correct radar based rain rates used by the Flash Flood Monitoring and Prediction (FFMP) package in the NWS forecast offices for issuance of flash flood warnings. This study will evaluate the performance of MPE and NMQ QPE products using independent gauges, object identification techniques for spatial verification and impact on surface runoff using a distributed hydrologic model. The effort will consist of baseline evaluations of these QPE systems to determine which combination of algorithm features is appropriate as well as investigate new methods for combining the gage and radar data. The Russian River Basin in California is used to demonstrate the comparison methodology with data collected from several rainfall events in March 2012.

  19. Investigation of mesoscale precipitation processes in the Carolinas using a radar-based climatology

    NASA Astrophysics Data System (ADS)

    Boyles, Ryan Patrick

    The complex topography, shoreline, soils, and land use patterns makes the Carolinas a unique location to study mesoscale processes. Using gage-calibrated radar estimates and a series of numerical model simulations, warm season mesoscale precipitation patterns are analyzed over the Carolinas. Gage-calibrated radar precipitation estimates are compared with surface gage observations. Stage IV estimates generally compared better than Stage II estimates, but some Stage II and Stage IV estimates have gross errors during autumn, winter, and spring seasons. Analysis of days when sea breeze is observed suggests that sea breeze induced precipitation occurs on nearly 40% of days in June, July, and August, but only 18% in May and 6% of days in April. Precipitation on days with sea breeze convection can contribute to over 50% of seasonal precipitation. Rainfall associated with sea breeze is generally maximized along east-facing shores 10-20 km inland, and minimized along south-facing shores in North Carolina. The shape of the shoreline along Cape Fear is associated with a local precipitation maximum that may be caused by the convergence of two sea breeze fronts from the south and east shores. Differential heating associated with contrasting soils along the Carolina Sandhills is suggested as a mechanism for enhancement in local precipitation. A high-resolution summer precipitation climatology suggests that precipitation is enhanced along the Sandhills region in both wet and dry years. Analysis of four numerical simulations suggests that contrasts in soils over the Carolinas Sandhills dominates over vegetation contrasts to produce heat flux gradients and a convergence zone along the sand-to-clay transition. Orographically induced precipitation is consistently observed in the summer, and appears to be isolated along windward slopes at 20km--40km from the ridge line. Amounts over external ridges are generally 50-100% higher than amounts observed over the foothills. Precipitation amounts over interior ridges and valleys are lower than observed on exterior ridges and are similar to values observed over the foothills. When compared with Stage IV estimates, the PRISM (Precipitation-elevation Regressions on Independent Slopes Model) method for estimating precipitation in complex terrain appears to largely over-estimate precipitation amounts over the interior ridges.

  20. Changes in Stratiform Clouds of Mesoscale Convective Complex Introduced by Dust Aerosols

    NASA Technical Reports Server (NTRS)

    Lin, B.; Min, Q.-L.; Li, R.

    2010-01-01

    Aerosols influence the earth s climate through direct, indirect, and semi-direct effects. There are large uncertainties in quantifying these effects due to limited measurements and observations of aerosol-cloud-precipitation interactions. As a major terrestrial source of atmospheric aerosols, dusts may serve as a significant climate forcing for the changing climate because of its effect on solar and thermal radiation as well as on clouds and precipitation processes. Latest satellites measurements enable us to determine dust aerosol loadings and cloud distributions and can potentially be used to reduce the uncertainties in the estimations of aerosol effects on climate. This study uses sensors on various satellites to investigate the impact of mineral dust on cloud microphysical and precipitation processes in mesoscale convective complex (MCC). A trans-Atlantic dust outbreak of Saharan origin occurring in early March 2004 is considered. For the observed MCCs under a given convective strength, small hydrometeors were found more prevalent in the dusty stratiform regions than in those regions that were dust free. Evidence of abundant cloud ice particles in the dust regions, particularly at altitudes where heterogeneous nucleation of mineral dust prevails, further supports the observed changes of clouds and precipitation. The consequences of the microphysical effects of the dust aerosols were to shift the size spectrum of precipitation-sized hydrometeors from heavy precipitation to light precipitation and ultimately to suppress precipitation and increase the lifecycle of cloud systems, especially over stratiform areas.

  1. Mechanism of generation of large (Ti,Nb,V)(C,N)-type precipitates in H13 + Nb tool steel

    NASA Astrophysics Data System (ADS)

    Xie, You; Cheng, Guo-guang; Chen, Lie; Zhang, Yan-dong; Yan, Qing-zhong

    2016-11-01

    The characteristics and generation mechanism of (Ti,Nb,V)(C,N) precipitates larger than 2 μm in Nb-containing H13 bar steel were studied. The results show that two types of (Ti,Nb,V)(C,N) phases exist—a Ti-V-rich one and an Nb-rich one—in the form of single or complex precipitates. The sizes of the single Ti-V-rich (Ti,Nb,V)(C,N) precipitates are mostly within 5 to 10 μm, whereas the sizes of the single Nb-rich precipitates are mostly 2-5 μm. The complex precipitates are larger and contain an inner Ti-V-rich layer and an outer Nb-rich layer. The compositional distribution of (Ti,Nb,V)(C,N) is concentrated. The average composition of the single Ti-V-rich phase is (Ti0.511V0.356Nb0.133)(C x N y ), whereas that for the single Nb-rich phase is (Ti0.061V0.263Nb0.676)(C x N y ). The calculation results based on the Scheil-Gulliver model in the Thermo-Calc software combining with the thermal stability experiments show that the large phases precipitate during the solidification process. With the development of solidification, the Ti-V-rich phase precipitates first and becomes homogeneous during the subsequent temperature reduction and heat treatment processes. The Nb-rich phase appears later.

  2. Does Dynamical Downscaling Introduce Novel Information in Climate Model Simulations of Recipitation Change over a Complex Topography Region?

    NASA Technical Reports Server (NTRS)

    Tselioudis, George; Douvis, Costas; Zerefos, Christos

    2012-01-01

    Current climate and future climate-warming runs with the RegCM Regional Climate Model (RCM) at 50 and 11 km-resolutions forced by the ECHAM GCM are used to examine whether the increased resolution of the RCM introduces novel information in the precipitation field when the models are run for the mountainous region of the Hellenic peninsula. The model results are inter-compared with the resolution of the RCM output degraded to match that of the GCM, and it is found that in both the present and future climate runs the regional models produce more precipitation than the forcing GCM. At the same time, the RCM runs produce increases in precipitation with climate warming even though they are forced with a GCM that shows no precipitation change in the region. The additional precipitation is mostly concentrated over the mountain ranges, where orographic precipitation formation is expected to be a dominant mechanism. It is found that, when examined at the same resolution, the elevation heights of the GCM are lower than those of the averaged RCM in the areas of the main mountain ranges. It is also found that the majority of the difference in precipitation between the RCM and the GCM can be explained by their difference in topographic height. The study results indicate that, in complex topography regions, GCM predictions of precipitation change with climate warming may be dry biased due to the GCM smoothing of the regional topography.

  3. A global satellite assisted precipitation climatology

    USGS Publications Warehouse

    Funk, Christopher C.; Verdin, Andrew P.; Michaelsen, Joel C.; Pedreros, Diego; Husak, Gregory J.; Peterson, P.

    2015-01-01

    Accurate representations of mean climate conditions, especially in areas of complex terrain, are an important part of environmental monitoring systems. As high-resolution satellite monitoring information accumulates with the passage of time, it can be increasingly useful in efforts to better characterize the earth's mean climatology. Current state-of-the-science products rely on complex and sometimes unreliable relationships between elevation and station-based precipitation records, which can result in poor performance in food and water insecure regions with sparse observation networks. These vulnerable areas (like Ethiopia, Afghanistan, or Haiti) are often the critical regions for humanitarian drought monitoring. Here, we show that long period of record geo-synchronous and polar-orbiting satellite observations provide a unique new resource for producing high resolution (0.05°) global precipitation climatologies that perform reasonably well in data sparse regions. Traditionally, global climatologies have been produced by combining station observations and physiographic predictors like latitude, longitude, elevation, and slope. While such approaches can work well, especially in areas with reasonably dense observation networks, the fundamental relationship between physiographic variables and the target climate variables can often be indirect and spatially complex. Infrared and microwave satellite observations, on the other hand, directly monitor the earth's energy emissions. These emissions often correspond physically with the location and intensity of precipitation. We show that these relationships provide a good basis for building global climatologies. We also introduce a new geospatial modeling approach based on moving window regressions and inverse distance weighting interpolation. This approach combines satellite fields, gridded physiographic indicators, and in situ climate normals. The resulting global 0.05° monthly precipitation climatology, the Climate Hazards Group's Precipitation Climatology version 1 (CHPclim v.1.0,http://dx.doi.org/10.15780/G2159X), is shown to compare favorably with similar global climatology products, especially in areas with complex terrain and low station densities.

  4. A global satellite-assisted precipitation climatology

    NASA Astrophysics Data System (ADS)

    Funk, C.; Verdin, A.; Michaelsen, J.; Peterson, P.; Pedreros, D.; Husak, G.

    2015-10-01

    Accurate representations of mean climate conditions, especially in areas of complex terrain, are an important part of environmental monitoring systems. As high-resolution satellite monitoring information accumulates with the passage of time, it can be increasingly useful in efforts to better characterize the earth's mean climatology. Current state-of-the-science products rely on complex and sometimes unreliable relationships between elevation and station-based precipitation records, which can result in poor performance in food and water insecure regions with sparse observation networks. These vulnerable areas (like Ethiopia, Afghanistan, or Haiti) are often the critical regions for humanitarian drought monitoring. Here, we show that long period of record geo-synchronous and polar-orbiting satellite observations provide a unique new resource for producing high-resolution (0.05°) global precipitation climatologies that perform reasonably well in data-sparse regions. Traditionally, global climatologies have been produced by combining station observations and physiographic predictors like latitude, longitude, elevation, and slope. While such approaches can work well, especially in areas with reasonably dense observation networks, the fundamental relationship between physiographic variables and the target climate variables can often be indirect and spatially complex. Infrared and microwave satellite observations, on the other hand, directly monitor the earth's energy emissions. These emissions often correspond physically with the location and intensity of precipitation. We show that these relationships provide a good basis for building global climatologies. We also introduce a new geospatial modeling approach based on moving window regressions and inverse distance weighting interpolation. This approach combines satellite fields, gridded physiographic indicators, and in situ climate normals. The resulting global 0.05° monthly precipitation climatology, the Climate Hazards Group's Precipitation Climatology version 1 (CHPclim v.1.0, doi:10.15780/G2159X), is shown to compare favorably with similar global climatology products, especially in areas with complex terrain and low station densities.

  5. CuCl2 for the isolation of a broad array of endohedral fullerenes containing metallic, metallic carbide, metallic nitride, and metallic oxide clusters, and separation of their structural isomers.

    PubMed

    Stevenson, Steven; Rottinger, Khristina A

    2013-08-19

    A typical arc-synthesis generates many types of fullerenes and endohedrals. Resulting soot extracts contain a complex mixture of >50 types of fullerenes, metallofullerenes, and their structural isomers. Prior to application development, novel separation methods are required to fractionate this rich array of metallic, metallic carbide, metallic nitride, and metallic oxide endohedrals, all of which can be present in a single, soot extract. Herein, we report the discovery of CuCl2 as a Lewis acid that will selectively precipitate only the more reactive members of each of these endohedral families. The more reactive Sc4O2@Ih-C80, Sc3C2@Ih-C80, and Sc3N@D3h-C78 endohedrals are quickly removed from extracts to greatly decrease the number of endohedrals present in a sample. Experiments indicate that enrichment factors of several orders of magnitude can be achieved within minutes of reaction time. CuCl2 also has sufficient selectivity to resolve and separate structural isomers, as demonstrated with Er2@C82 (isomer I, Cs(6)-C82 versus isomer III). The selective complexation of CuCl2 with fullerenes can be correlated to their first oxidation potential. We estimate a significantly lower threshold of precipitation for CuCl2 (<0.19 V) compared to stronger Lewis acids. Fullerenes and metallofullerenes having first oxidation potentials above 0.19 V tend to remain unreacted in solution. In contrast, species with first oxidation potentials below 0.19 V (vs Fc/Fc(+)) precipitate via complexation, and are easily decomplexed. CuCl2 is compared to Lewis acids having higher precipitation thresholds (e.g., FeCl3) in our goal to predict a priori which endohedrals would remain in solution versus which endohedral species would complex and precipitate. The ability to predict endohedral precipitation a priori is beneficial to the design of purification strategies for metallofullerenes.

  6. Urban Modification of Convection and Rainfall in Complex Terrain

    NASA Astrophysics Data System (ADS)

    Freitag, B. M.; Nair, U. S.; Niyogi, D.

    2018-03-01

    Despite a globally growing proportion of cities located in regions of complex terrain, interactions between urbanization and complex terrain and their meteorological impacts are not well understood. We utilize numerical model simulations and satellite data products to investigate such impacts over San Miguel de Tucumán, Argentina. Numerical modeling experiments show urbanization results in 20-30% less precipitation downwind of the city and an eastward shift in precipitation upwind. Our experiments show that changes in surface energy, boundary layer dynamics, and thermodynamics induced by urbanization interact synergistically with the persistent forcing of atmospheric flow by complex terrain. With urbanization increasing in mountainous regions, land-atmosphere feedbacks can exaggerate meteorological forcings leading to weather impacts that require important considerations for sustainable development of urban regions within complex terrain.

  7. Interactions between calcium precipitation and the polyphosphate-accumulating bacteria metabolism.

    PubMed

    Barat, R; Montoya, T; Borrás, L; Ferrer, J; Seco, A

    2008-07-01

    A sequencing batch reactor that is operated for biological phosphorus removal has been operated under different influent calcium concentrations to study the precipitation process and the possible effects of phosphorus precipitation in the biological phosphorus removal process. Four experiments were carried out under different influent calcium concentrations ranging from 10 to 90 g Ca m(-3). The experimental results and the equilibrium study, which are based on the saturation index calculation, confirm that the process controlling the calcium behaviour is the calcium phosphate precipitation. This precipitation takes place at two stages: initially, precipitation of the amorphous calcium phosphate, and later crystallization of hydroxyapatite. Also the accumulation of phosphorus precipitated was observed when the influent calcium concentration was increased. In all the experiments, the influent wastewater ratio P/COD was kept constant. It has been observed that, at high calcium concentration, the ratio between phosphate release and acetate uptake (P(rel)/Ac(uptake)) decreases. Changes in the polyphosphate-accumulating organism (PAO) population and in the glycogen-accumulating organism (GAO) population during the experimental period were ruled out by means of fluorescence in situ hybridization. These results could suggest that PAO are able to change their metabolic pathways based on external conditions, such as influent calcium concentration. The accumulation of phosphorus precipitated as calcium phosphate at high influent calcium concentration throughout the experimental period confirmed that phosphate precipitation is a process that can affect the PAO metabolism.

  8. Reconstruction of Late Quaternary Climate in Central Europe - A Comparison of Stable Isotope and Trace Element Variations in Speleothems From Different Cave Systems in Germany.

    NASA Astrophysics Data System (ADS)

    Nordhoff, P.; Wiegand, B.; Simon, K.; Rosendahl, W.; Hansen, B. T.; Kempe, S.

    2003-12-01

    Speleothems (stalagmites, stalactites, flowstones) are important archives for Late Quaternary continental climatic and paleo-environmental reconstruction. Speleothems form when calcium carbonate precipitates from solutions seeping into caves hosted e.g. in limestone or dolomite complexes. Information of past climate variability and changes in local environmental conditions can be obtained from signatures of the stable isotopes of oxygen and carbon as well as trace element pattern recorded in speleothems. Reconstruction of paleo-temperature and past environmental conditions from stable isotopes, however, require isotopic equilibrium between the drip water and the precipitating calcium carbonate. Results from Dietzel et al. (1992) and Johnson and Ingram (2001) indicate that the formation of modern travertine and speleothem calcite occurs under isotopic equilibrium. Factors that influence the stable oxygen and carbon isotope composition during speleothem precipitation include e.g. the moisture source and precipitation, photosynthetic pathways, the bedrock proportion, and the drip rate. This often leads to a situation with several variables. However, a specific interpretation is possible when dealing with environments where only one of the factors is dominant, or specific settings are assumed to be invariant, or further proxies like trace element variations help to define the frame conditions during speleothem formation. Concentrations of trace elements (e.g. Sr, Mg) which are co-precipitated with calcite are related to changes in the composition of the solution and strongly depend on the dissolution/precipitation dynamics along drip water flow paths. In a multiproxy approach they are a valuable tool for the interpretation of the recorded stable isotope variations. We present first results from different cave systems located in the Swabian Alps and the Harz Mountains (Germany). Our study includes a high-resolution multiproxy approach, using U/Th-TIMS data, stable oxygen/carbon isotope data, and geochemical compositions of speleothems, covering ages from the Late Pleistocene to the Early Holocene. The results are compared to geochemical data from host rocks, soil zones, cave sediments, drip water compositions, and recent calcium carbonate precipitates. Understanding the response of a cave system to the actual climatic, hydrologic and environmental regimen is a main requirement for the interpretation of "paleo-information" conserved in speleothems in order to lead to a coherent picture of past continental climate dynamics. References: Dietzel M., Usdowski E., and Hoefs J., (1992): Applied Geochemistry 7: 177-184. Johnson, K.R. and Ingram, B.L. (2001): Abstract volume, 4th Internat. Symp. On Applied Isotope Geochemistry, Pacific Groove, USA: 70-72.

  9. Nitrogen deposition in precipitation to a monsoon-affected eutrophic embayment: Fluxes, sources, and processes

    NASA Astrophysics Data System (ADS)

    Wu, Yunchao; Zhang, Jingping; Liu, Songlin; Jiang, Zhijian; Arbi, Iman; Huang, Xiaoping; Macreadie, Peter Ian

    2018-06-01

    Daya Bay in the South China Sea (SCS) has experienced rapid nitrogen pollution and intensified eutrophication in the past decade due to economic development. Here, we estimated the deposition fluxes of nitrogenous species, clarified the contribution of nitrogen from precipitation and measured ions and isotopic composition (δ15N and δ18O) of nitrate in precipitation in one year period to trace its sources and formation processes among different seasons. We found that the deposition fluxes of total dissolved nitrogen (TDN), NO3-, NH4+, NO2-, and dissolved organic nitrogen (DON) to Daya Bay were 132.5, 64.4 17.5, 1.0, 49.6 mmol m-2•yr-1, respectively. DON was a significant contributor to nitrogen deposition (37% of TDN), and NO3- accounted for 78% of the DIN in precipitation. The nitrogen deposition fluxes were higher in spring and summer, and lower in winter. Nitrogen from precipitation contributed nearly 38% of the total input of nitrogen (point sources input and dry and wet deposition) in Daya Bay. The δ15N-NO3- abundance, ion compositions, and air mass backward trajectories implicated that coal combustion, vehicle exhausts, and dust from mainland China delivered by northeast monsoon were the main sources in winter, while fossil fuel combustion (coal combustion and vehicle exhausts) and dust from PRD and southeast Asia transported by southwest monsoon were the main sources in spring; marine sources, vehicle exhausts and lightning could be the potential sources in summer. δ18O results showed that OH pathway was dominant in the chemical formation process of nitrate in summer, while N2O5+ DMS/HC pathways in winter and spring.

  10. Characterizing the drivers of seedling leaf gas exchange responses to warming and altered precipitation: indirect and direct effects.

    PubMed

    Smith, Nicholas G; Pold, Grace; Goranson, Carol; Dukes, Jeffrey S

    2016-01-01

    Anthropogenic forces are projected to lead to warmer temperatures and altered precipitation patterns globally. The impact of these climatic changes on the uptake of carbon by the land surface will, in part, determine the rate and magnitude of these changes. However, there is a great deal of uncertainty in how terrestrial ecosystems will respond to climate in the future. Here, we used a fully factorial warming (four levels) by precipitation (three levels) manipulation experiment in an old-field ecosystem in the northeastern USA to examine the impact of climatic changes on leaf carbon exchange in five species of deciduous tree seedlings. We found that photosynthesis generally increased in response to increasing precipitation and decreased in response to warming. Respiration was less sensitive to the treatments. The net result was greater leaf carbon uptake in wetter and cooler conditions across all species. Structural equation modelling revealed the primary pathway through which climate impacted leaf carbon exchange. Net photosynthesis increased with increasing stomatal conductance and photosynthetic enzyme capacity (V cmax ), and decreased with increasing respiration of leaves. Soil moisture and leaf temperature at the time of measurement most heavily influenced these primary drivers of net photosynthesis. Leaf respiration increased with increasing soil moisture, leaf temperature, and photosynthetic supply of substrates. Counter to the soil moisture response, respiration decreased with increasing precipitation amount, indicating that the response to short- (i.e. soil moisture) versus long-term (i.e. precipitation amount) water stress differed, possibly as a result of changes in the relative amounts of growth and maintenance demand for respiration over time. These data (>500 paired measurements of light and dark leaf gas exchange), now publicly available, detail the pathways by which climate can impact leaf gas exchange and could be useful for testing assumptions in land surface models. © The Authors 2016. Published by Oxford University Press on behalf of the Annals of Botany Company.

  11. Characterizing the drivers of seedling leaf gas exchange responses to warming and altered precipitation: indirect and direct effects

    PubMed Central

    Smith, Nicholas G.; Pold, Grace; Goranson, Carol; Dukes, Jeffrey S.

    2016-01-01

    Anthropogenic forces are projected to lead to warmer temperatures and altered precipitation patterns globally. The impact of these climatic changes on the uptake of carbon by the land surface will, in part, determine the rate and magnitude of these changes. However, there is a great deal of uncertainty in how terrestrial ecosystems will respond to climate in the future. Here, we used a fully factorial warming (four levels) by precipitation (three levels) manipulation experiment in an old-field ecosystem in the northeastern USA to examine the impact of climatic changes on leaf carbon exchange in five species of deciduous tree seedlings. We found that photosynthesis generally increased in response to increasing precipitation and decreased in response to warming. Respiration was less sensitive to the treatments. The net result was greater leaf carbon uptake in wetter and cooler conditions across all species. Structural equation modelling revealed the primary pathway through which climate impacted leaf carbon exchange. Net photosynthesis increased with increasing stomatal conductance and photosynthetic enzyme capacity (Vcmax), and decreased with increasing respiration of leaves. Soil moisture and leaf temperature at the time of measurement most heavily influenced these primary drivers of net photosynthesis. Leaf respiration increased with increasing soil moisture, leaf temperature, and photosynthetic supply of substrates. Counter to the soil moisture response, respiration decreased with increasing precipitation amount, indicating that the response to short- (i.e. soil moisture) versus long-term (i.e. precipitation amount) water stress differed, possibly as a result of changes in the relative amounts of growth and maintenance demand for respiration over time. These data (>500 paired measurements of light and dark leaf gas exchange), now publicly available, detail the pathways by which climate can impact leaf gas exchange and could be useful for testing assumptions in land surface models. PMID:27658816

  12. Facilitated Protein Association via Engineered Target Search Pathways Visualized by Paramagnetic NMR Spectroscopy.

    PubMed

    An, So Young; Kim, Eun-Hee; Suh, Jeong-Yong

    2018-06-05

    Proteins assemble to form functional complexes via the progressive evolution of nonspecific complexes formed by transient encounters. This target search process generally involves multiple routes that lead the initial encounters to the final complex. In this study, we have employed NMR paramagnetic relaxation enhancement to visualize the encounter complexes between histidine-containing phosphocarrier protein and the N-terminal domain of enzyme I and demonstrate that protein association can be significantly enhanced by engineering on-pathways. Specifically, mutations in surface charges away from the binding interface can elicit new on-pathway encounter complexes, increasing their binding affinity by an order of magnitude. The structure of these encounter complexes indicates that such on-pathways extend the built-in target search process of the native protein complex. Furthermore, blocking on-pathways by countering mutations reverts their binding affinity. Our study thus illustrates that protein interactions can be engineered by rewiring the target search process. Copyright © 2018 Elsevier Ltd. All rights reserved.

  13. Staged Single Ventricle Palliation and Homozygous Sickle Cell Disease.

    PubMed

    Maddali, Madan Mohan; Junghare, Minakshi Sandip; Nishant, Arora Ram; Kandachar, Pranav Subbaraya; Valliattu, Johan

    2016-04-01

    Hypoxemia is a well-known trigger for precipitating a sickling crisis in patients with sickle cell disease. Patients undergoing staged single ventricle palliation have hypoxemia during the initial stages of the Fontan pathway. The successful completion of staged single ventricle palliation in a child with a combination of homozygous sickle cell disease and a single ventricle physiology that tolerate prolonged hypoxemia during earlier stages of Fontan pathway is described. © 2016 Wiley Periodicals, Inc.

  14. Amyloid Fiber Formation in Human γD-Crystallin Induced by UV-B Photodamage

    PubMed Central

    Moran, Sean D.; Zhang, Tianqi O.; Decatur, Sean M.; Zanni, Martin T.

    2013-01-01

    γD-crystallin is an abundant structural protein of the lens that is found in native and modified forms in cataractous aggregates. We establish that UV-B irradiation of γD-crystallin leads to structurally specific modifications and precipitation via two mechanisms: amorphous aggregates and amyloid fibers. UV-B radiation causes cleavage of the backbone, in large measure near the interdomain interface, where side chain oxidations are also concentrated. 2D IR spectroscopy and expressed protein ligation localize fiber formation exclusively to the C-terminal domain of γD-crystallin. The native β-sandwich domains are not retained upon precipitation by either mechanism. The similarity between the amyloid forming pathway when induced by either UV-B radiation or low pH suggests that it is the propensity for the C-terminal β-sandwich domain to form amyloid β-sheets that determines the misfolding pathway independent of the mechanism of denaturation. PMID:23957864

  15. Compositional Pathways and Capillary Effects during Early-stage Isothermal Precipitation in a Nondilute Ni-Al-Cr Alloy

    NASA Technical Reports Server (NTRS)

    Sudbrack, Chantal K.; Noebe, Ronald D.; Seidman, David N.

    2006-01-01

    For a Ni-5.2 Al-14.2 Cr at.% alloy with moderate solute supersaturations, the compositional pathways, as measured with atom-probe tomography, during early to later stage y'(LI2)-precipitation (R = 0.45-10 nm), aged at 873 K, are discussed in light of a multi-component coarsening model. Employing nondilute thermodynamics, detailed model analyses during quasistationary coarsening of the experimental data establish that the y/y' interfacial free-energy is 22- 23+/-7 mJ/sq m. Additionally, solute diffusivities are significantly slower than model estimates. Strong quantitative evidence indicates that an observed y'-supersaturation of Al results from the Gibbs-Thomson effect, providing the first experimental verification of this phenomenon. The Gibbs-Thomson relationship, for a ternary system, as well as differences in measured phase equilibria with CALPHAD assessments, are considered in great detail.

  16. Numerical simulations of significant orographic precipitation in Madeira island

    NASA Astrophysics Data System (ADS)

    Couto, Flavio Tiago; Ducrocq, Véronique; Salgado, Rui; Costa, Maria João

    2016-03-01

    High-resolution simulations of high precipitation events with the MESO-NH model are presented, and also used to verify that increasing horizontal resolution in zones of complex orography, such as in Madeira island, improve the simulation of the spatial distribution and total precipitation. The simulations succeeded in reproducing the general structure of the cloudy systems over the ocean in the four periods considered of significant accumulated precipitation. The accumulated precipitation over the Madeira was better represented with the 0.5 km horizontal resolution and occurred under four distinct synoptic situations. Different spatial patterns of the rainfall distribution over the Madeira have been identified.

  17. Contrasting model complexity under a changing climate in a headwaters catchment.

    NASA Astrophysics Data System (ADS)

    Foster, L.; Williams, K. H.; Maxwell, R. M.

    2017-12-01

    Alpine, snowmelt-dominated catchments are the source of water for more than 1/6th of the world's population. These catchments are topographically complex, leading to steep weather gradients and nonlinear relationships between water and energy fluxes. Recent evidence suggests that alpine systems are more sensitive to climate warming, but these regions are vastly simplified in climate models and operational water management tools due to computational limitations. Simultaneously, point-scale observations are often extrapolated to larger regions where feedbacks can both exacerbate or mitigate locally observed changes. It is critical to determine whether projected climate impacts are robust to different methodologies, including model complexity. Using high performance computing and an integrated model of a representative headwater catchment we determined the hydrologic response from 30 projected climate changes to precipitation, temperature and vegetation for the Rocky Mountains. Simulations were run with 100m and 1km resolution, and with and without lateral subsurface flow in order to vary model complexity. We found that model complexity alters nonlinear relationships between water and energy fluxes. Higher-resolution models predicted larger changes per degree of temperature increase than lower resolution models, suggesting that reductions to snowpack, surface water, and groundwater due to warming may be underestimated in simple models. Increases in temperature were found to have a larger impact on water fluxes and stores than changes in precipitation, corroborating previous research showing that mountain systems are significantly more sensitive to temperature changes than to precipitation changes and that increases in winter precipitation are unlikely to compensate for increased evapotranspiration in a higher energy environment. These numerical experiments help to (1) bracket the range of uncertainty in published literature of climate change impacts on headwater hydrology; (2) characterize the role of precipitation and temperature changes on water supply for snowmelt-dominated downstream basins; and (3) identify which climate impacts depend on the scale of simulation.

  18. Complete genome sequence of Lysinibacillus sphaericus LMG 22257, a strain with ureolytic activity inducing calcium carbonate precipitation.

    PubMed

    Yan, Wenkai; Xiao, Xiang; Zhang, Yu

    2017-03-20

    Microbiologically induced calcium carbonate precipitation shows the potential for use in bioremediation and construction consolidation, but the efficiency of this process must be improved. Lysinibacillus sphaericus LMG 22257 is a gram-positive ureolytic strain that has recently been applied for consolidating construction by mediating calcium carbonate precipitation. The complete genome sequence of L. sphaericus LMG 22257 is 3,436,578 base pairs with a GC content of 38.99%. The urea degradation pathway and genes related to extracellular polymeric substance biosynthesis were also identified. The strain can tolerate high alkalinity (pH up to 10) and high urea concentration (up to 3M). These findings provide insights into the microbiologically induced carbonate precipitation and extend the application of the metabolic potential of L. sphaericus LMG 22257 for bioremediation. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. Preservation of commonly applied fluorescent tracers in complex water samples

    NASA Astrophysics Data System (ADS)

    Cao, Viet; Schaffer, Mario; Jin, Yulan; Licha, Tobias

    2017-06-01

    Water sample preservation and pre-treatment are important steps for achieving accurate and reproductive results from tracer tests. However, this is particularly challenging for complex water mixtures prior to fluorescence analysis. In this study, the interference of iron and calcium precipitation with nine commonly applied conservative tracers, uranine, eosin, 1-naphthalene sulfonate, 1,5-naphthalene disulfonate, 2,6-naphthalene disulfonate, 4-amino-1-naphthalene sulfonate, 6-hydroxy-2-naphthalene sulfonate, 1,3,6-naphthalene trisulfonate, and 1,3,6,8-pyrene tetrasulfonate, was investigated in batch experiments. In general, the observed results are influenced by precipitates. A technique consisting of pH adjustment and centrifugation is described for preserving samples and avoiding the impact of these precipitates on the tracer test results.

  20. Impacts of Aerosols on Seasonal Precipitation and Snowpack in California Based on Convection-Permitting WRF-Chem Simulations

    NASA Astrophysics Data System (ADS)

    Gu, Y.; Wu, L.; Jiang, J. H.; Su, H.; Yu, N.; Zhao, C.; Qian, Y.; Zhao, B.; Liou, K. N.; Choi, Y. S.

    2017-12-01

    A version of the WRF-Chem model with fully coupled aerosol-meteorology-snowpack is employed to investigate the impacts of various aerosol sources on precipitation and snowpack in California. In particular, the impacts of locally emitted anthropogenic and dust aerosols, and aerosols transported from outside of California are studied. We differentiate three pathways of aerosol effects including aerosol-radiation interaction (ARI), aerosol-snow interaction (ASI), and aerosol-cloud interaction (ACI). The convection-permitting model simulations show that precipitation, snow water equivalent (SWE), and surface air temperature averaged over the whole domain (34-42°N, 117-124°W, not including ocean points) are reduced when aerosols are included, therefore reducing the high model biases of these variables when aerosol effects are not considered. Aerosols affect California water resources through the warming of mountain tops and anomalously low precipitation, however, different aerosol sources play different roles in changing surface temperature, precipitation and snowpack in California by means of various weights of the three pathways. ARI by all aerosols mainly cools the surface, leading to slightly increased SWE over the mountains. Locally emitted dust aerosols warm the surface of mountain tops through ASI, in which the reduced snow albedo associated with dirty snow leads to more surface absorption of solar radiation and reduced SWE. Transported and local anthropogenic aerosols play a dominant role in increasing cloud water amount but reducing precipitation through ACI, leading to reduced SWE and runoff over the Sierra Nevada, as well as the warming of mountain tops associated with decreased SWE and hence lower surface albedo. The average changes in surface temperature from October to June are about -0.19 K and 0.22 K for the whole domain and over mountain tops, respectively. Overall, the averaged reduction during October to June is about 7% for precipitation, 3% for SWE, and 7% for surface runoff for the whole domain, while the corresponding numbers are 12%, 10%, and 10% for mountain tops. The reduction in SWE is more significant in a dry year, with 9% for the whole domain and 16% for mountain tops.

  1. Evaluating the microbial community and gene regulation involved in crystallization kinetics of ZnS formation in reduced environments

    NASA Astrophysics Data System (ADS)

    Falk, Nicholas; Chaganti, Subba Rao; Weisener, Christopher G.

    2018-01-01

    In anoxic environments, sulfate-reducing bacteria (SRB) may precipitate sparingly-soluble, fine-grained sulfides as by-products of dissimilatory sulfate reduction. This bio-mechanism lends importance to acid rock drainage (ARD) remediation efforts for its ability to immobilize harmful metals from contaminant pathways, including Zn. However, SRB often coexist alongside multiple bacterial guilds in these environments, and may be sustained or hindered by the activities and metabolic by-products of their cohorts, driven by the commonly available substrates. Thus, the effectiveness of onset sulfate reduction and resultant metal-sulfide generation in ARD treatment can be enhanced by unravelling the complexities associated with these interactions. This research used material sourced from a passive bioreactor system located at the Stockton Coal Mine, New Zealand to investigate SRB activity and associated community function. RNA sequencing showed spore-forming Desulfitobacterium and Desulfotomaculum as the dominant SRB enriched from the reduced zone of the bioreactor. Metatranscriptomic analysis revealed acetogenic bacteria as syntrophic partners in substrate availability and Pseudomonas as metal-resistant community members. ZnS precipitates were observed by scanning electron microscopy (SEM) in short-term batch enrichments as well as long-term raw bioreactor material, with observed differences in mineral arrangement indicative of different nucleation scenarios. Syntrophy, metal response mechanisms, and the capacity for sporulation were observed as key microbial functions in mine waste reclamation settings. Here, Zn and S mass balance calculations coupled with RNA sequence data and microscopy illuminated favourable physicochemical and biological conditions for early metal sulfide precipitation in passive treatment systems for ARD and highlight the advantages of linking both lab and field-scale studies.

  2. Microbially Induced Calcite Precipitation (MICP) - A Technology for Managing Flow and Transport in Porous and Fractured Media

    NASA Astrophysics Data System (ADS)

    Phillips, A. J.; Hiebert, R.; Kirksey, J.; Lauchnor, E. G.; Rothman, A.; Spangler, L.; Esposito, R.; Gerlach, R.; Cunningham, A. B.

    2014-12-01

    Certain microorganisms e.g., Sporosarcina pasteurii contribute enzymes that catalyze reactions which in the presence of calcium, can create saturation conditions favorable for calcium carbonate precipitation (microbially-induced calcium carbonate precipitation (MICP)). MICP can be used for a number of engineering applications including securing geologic storage of CO2 or other fluids by sealing fractures, improving wellbore integrity, and stabilizing fractured and unstable porous media. MICP treatment has the advantage of the use of small microorganisms, ~2μm, suggesting applicability to treatment of small aperture fractures not accessible to traditional treatments, for example the use of fine cement. The promotion of MICP in the subsurface is a complex reactive transport problem coupling microbial, abiotic (geochemical), geomechanical and hydrodynamic processes. In the laboratory, MICP has been demonstrated to cement together heavily fractured shale and reduce the permeability of fractures in shale and sandstone cores up to five orders of magnitude under both ambient and subsurface relevant pressure conditions (Figure 1). Most recently, a MICP fracture treatment field study was performed at a well at the Southern Company Gorgas Steam Generation Plant (Alabama) (Figure 1). The Fayetteville Sandstone at approximately 1120' below ground surface was hydraulically fractured prior to MICP treatment. After 4 days of injection of 24 calcium pulses and 6 microbial inoculations, injectivity of brine into the formation was significantly reduced. The experiment also resulted in a reduction in pressure decay which is a measure of improved wellbore integrity. These promising results suggest the potential for MICP treatment to seal fractured pathways at the field scale to improve the long-term security of geologically-stored carbon dioxide or prevent leakage of shale gas or hydraulic fracturing fluids into functional overlying aquifers, reducing environmental impacts.

  3. Mercuric iodate precipitation from radioiodine-containing off-gas scrubber solution

    DOEpatents

    Partridge, Jerry A.; Bosuego, Gail P.

    1982-01-01

    Mercuric nitrate-nitric acid scrub solutions containing radioiodine may be reduced in volume without excessive loss of volatile iodine. The use of concentrated nitric acid during an evaporation process oxidizes the mercury-iodide complex to a less volatile mercuric iodate precipitate.

  4. Evaluation of diffuse and preferential flow pathways of infiltrated precipitation and irrigation using oxygen and hydrogen isotopes

    NASA Astrophysics Data System (ADS)

    Ma, Bin; Liang, Xing; Liu, Shaohua; Jin, Menggui; Nimmo, John R.; Li, Jing

    2017-05-01

    Subsurface-water flow pathways in three different land-use areas (non-irrigated grassland, poplar forest, and irrigated arable land) in the central North China Plain were investigated using oxygen (18O) and hydrogen (2H) isotopes in samples of precipitation, soils, and groundwater. Soil water in the top 10 cm was significantly affected by both evaporation and infiltration. Water at 10-40 cm depth in the grassland and arable land, and 10-60 cm in poplar forest, showed a relatively short residence time, as a substantial proportion of antecedent soil water was mixed with a 92-mm storm infiltration event, whereas below those depths (down to 150 cm), depleted δ18O spikes suggested that some storm water bypassed the shallow soil layers. Significant differences, in soil-water content and δ18O values, within a small area, suggested that the proportion of immobile soil water and water flowing in subsurface pathways varies depending on local vegetation cover, soil characteristics and irrigation applications. Soil-water δ18O values revealed that preferential flow and diffuse flow coexist. Preferential flow was active within the root zone, independent of antecedent soil-water content, in both poplar forest and arable land, whereas diffuse flow was observed in grassland. The depleted δ18O spikes at 20-50 cm depth in the arable land suggested the infiltration of irrigation water during the dry season. Temporal isotopic variations in precipitation were subdued in the shallow groundwater, suggesting more complete mixing of different input waters in the unsaturated zone before reaching the shallow groundwater.

  5. Stratospheric role in interdecadal changes of El Niño impacts over Europe

    NASA Astrophysics Data System (ADS)

    Ayarzagüena, B.; López-Parages, J.; Iza, M.; Calvo, N.; Rodríguez-Fonseca, B.

    2018-04-01

    The European precipitation response to El Niño (EN) has been found to present interdecadal changes, with alternated periods of important or negligible EN impact in late winter. These periods are associated with opposite phases of multi-decadal sea surface temperature (SST) variability, which modifies the tropospheric background and EN teleconnections. In addition, other studies have shown how SST anomalies in the equatorial Pacific, and in particular, the location of the largest anomalous SST, modulate the stratospheric response to EN. Nevertheless, the role of the stratosphere on the stationarity of EN response has not been investigated in detail so far. Using reanalysis data, we present a comprehensive study of EN teleconnections to Europe including the role of the ocean background and the stratosphere in the stationarity of the signal. The results reveal multidecadal variability in the location of EN-related SST anomalies that determines different teleconnections. In periods with relevant precipitation signal over Europe, the EN SST pattern resembles Eastern Pacific EN and the stratospheric pathway plays a key role in transmitting the signal to Europe in February, together with two tropospheric wavetrains that transmit the signal in February and April. Conversely, the stratospheric pathway is not detected in periods with a weak EN impact on European precipitation, corresponding to EN-related SST anomalies primarily located over the central Pacific. SST mean state and its associated atmospheric background control the location of EN-related SST anomalies in different periods and modulate the establishment of the aforementioned stratospheric pathway of EN teleconnection to Europe too.

  6. Spatial distribution of the daily precipitation concentration index in Southern Russia

    NASA Astrophysics Data System (ADS)

    Vyshkvarkova, Elena; Voskresenskaya, Elena; Martin-Vide, Javier

    2018-05-01

    The territory of Southern Russia presents a great diversity of climates and complex orography that lead to a very different precipitation distribution. Annual precipitation amounts differ between 222 mm in the coast of the Caspian Sea and > 2000 mm in the highest parts of the Caucasus Mountains. In order to investigate the statistical structure of daily precipitation across the study region the daily precipitation Concentration Index (CI) was used. In present paper, the CI was calculated for 42 meteorological stations during the 1970-2010 period. The analysis of precipitation concentration identified that the distribution of daily precipitation is more regular over the west, north and south regions compared to the east (the Caspian Sea coast and the Caspian Depression). The Crimean peninsula is characterized by low CI values in the north and high values in the eastern part.

  7. Complexation between sodium dodecyl sulfate and amphoteric polyurethane nanoparticles.

    PubMed

    Qiao, Yong; Zhang, Shifeng; Lin, Ouya; Deng, Liandong; Dong, Anjie

    2007-09-27

    The complexation between negatively charged sodium dodecyl sulfate (SDS) and positively charged amphoteric polyurethane (APU) self-assembled nanoparticles (NPs) containing nonionic hydrophobic segments is studied by dynamic light scattering, pyrene fluorescent probing, zeta-potential, and transmission electron microscopy (TEM) in the present paper. With increasing the mol ratio of SDS to the positive charges on the surface of APU NPs, the aqueous solution of APU NPs presents precipitation at pH 2, around stoichiometric SDS concentration, and then the precipitate dissociates with excess SDS to form more stable nanoparticles of ionomer complexes. Three stages of the complexation process are clearly shown by the pyrene I1/I3 variation of the complex systems, which only depends on the ratio of SDS/APU, and demonstrate that the process is dominated by electrostatic attraction and hydrophobic aggregation.

  8. The role of extracellular DNA in uranium precipitation and biomineralisation.

    PubMed

    Hufton, Joseph; Harding, John H; Romero-González, Maria E

    2016-10-26

    Bacterial extra polymeric substances (EPS) have been associated with the extracellular precipitation of uranium. Here we report findings on the biomineralisation of uranium, with extracellular DNA (eDNA) used as a model biomolecule representative of EPS. The complexation and precipitation of eDNA with uranium were investigated as a function of pH, ionic strength and varying concentrations of reactants. The role of phosphate moieties in the biomineralisation mechanism was studied by enzymatically releasing phosphate (ePO 4 ) from eDNA compared to abiotic phosphate (aPO 4 ). The eDNA-uranium precipitates and uranium minerals obtained were characterised by Attenuated Total Reflectance-Fourier Transform Infrared (ATR-FT-IR) spectroscopy, Scanning Electron Microscopy-Energy Dispersive X-Ray analysis (SEM-EDX), X-Ray Powder Diffraction (XRD) and X-Ray Photoelectron Spectroscopy (XPS). ATR-FT-IR showed that at pH 5, the eDNA-uranium precipitation mechanism was predominantly mediated by interactions with phosphate moieties from eDNA. At pH 2, the uranium interactions with eDNA occur mainly through phosphate. The solubility equilibrium was dependent on pH with the formation of precipitate reduced as the pH increased. The XRD data confirmed the formation of a uranium phosphate precipitate when synthesised using ePO 4 . XPS and SEM-EDX studies showed the incorporation of carbon and nitrogen groups from the enzymatic orthophosphate hydrolysis on the obtained precipitated. These results suggested that the removal of uranium from solution occurs via two mechanisms: complexation by eDNA molecules and precipitation of a uranium phosphate mineral of the type (UO 2 HPO 4 )·xH 2 O by enzymatic orthophosphate hydrolysis. This demonstrated that eDNA from bacterial EPS is a key contributor to uranium biomineralisation.

  9. Evaluation of NWP-based Satellite Precipitation Error Correction with Near-Real-Time Model Products and Flood-inducing Storms

    NASA Astrophysics Data System (ADS)

    Zhang, X.; Anagnostou, E. N.; Schwartz, C. S.

    2017-12-01

    Satellite precipitation products tend to have significant biases over complex terrain. Our research investigates a statistical approach for satellite precipitation adjustment based solely on numerical weather simulations. This approach has been evaluated in two mid-latitude (Zhang et al. 2013*1, Zhang et al. 2016*2) and three topical mountainous regions by using the WRF model to adjust two high-resolution satellite products i) National Oceanic and Atmospheric Administration (NOAA) Climate Prediction Center morphing technique (CMORPH) and ii) Global Satellite Mapping of Precipitation (GSMaP). Results show the adjustment effectively reduces the satellite underestimation of high rain rates, which provides a solid proof-of-concept for continuing research of NWP-based satellite correction. In this study we investigate the feasibility of using NCAR Real-time Ensemble Forecasts*3 for adjusting near-real-time satellite precipitation datasets over complex terrain areas in the Continental United States (CONUS) such as Olympic Peninsula, California coastal mountain ranges, Rocky Mountains and South Appalachians. The research will focus on flood-inducing storms occurred from May 2015 to December 2016 and four satellite precipitation products (CMORPH, GSMaP, PERSIANN-CCS and IMERG). The error correction performance evaluation will be based on comparisons against the gauge-adjusted Stage IV precipitation data. *1 Zhang, Xinxuan, et al. "Using NWP simulations in satellite rainfall estimation of heavy precipitation events over mountainous areas." Journal of Hydrometeorology 14.6 (2013): 1844-1858. *2 Zhang, Xinxuan, et al. "Hydrologic Evaluation of NWP-Adjusted CMORPH Estimates of Hurricane-Induced Precipitation in the Southern Appalachians." Journal of Hydrometeorology 17.4 (2016): 1087-1099. *3 Schwartz, Craig S., et al. "NCAR's experimental real-time convection-allowing ensemble prediction system." Weather and Forecasting 30.6 (2015): 1645-1654.

  10. The Contribution of Mesoscale Convective Weather Systems to the Warm-Season Precipitation in the United States.

    NASA Astrophysics Data System (ADS)

    Fritsch, J. M.; Kane, R. J.; Chelius, C. R.

    1986-10-01

    The contribution of precipitation from mesoscale convective weather systems to the warm-season (April-September) rainfall in the United States is evaluated. Both Mesoscale Convective Complexes (MCC's) and other large, long-lived mesoscale convective systems that do not quite meet Maddox's criteria for being termed an MCC are included in the evaluation. The distribution and geographical limits of the precipitation from the convective weather systems are constructed for the warm seasons of 1982, a `normal' year, and 1983, a drought year. Precipitation characteristics of the systems are compared for the 2 years to determine how large-scale drought patterns affect their precipitation production.The frequency, precipitation characteristics and hydrologic ramifications of multiple occurrences, or series, of convective weather systems are presented and discussed. The temporal and spatial characteristics of the accumulated precipitation from a series of convective complexes is investigated and compared to that of Hurricane Alicia.It is found that mesoscale convective weather systems account for approximately 30% to 70% of the warm-season (April-September) precipitation over much of the region between the Rocky Mountains and the Mississippi River. During the June through August period, their contribution is even larger. Moreover, series of convective weather systems are very likely the most prolific precipitation producer in the United States, rivaling and even exceeding that of hurricanes.Changes in the large-scale circulation patterns affected the seasonal precipitation from mesoscale convective weather systems by altering the precipitation characteristics of individual systems. In particular, for the drought period of 1983, the frequency of the convective systems remained nearly the same as in the `normal' year (1982); however, the average precipitation area and the average volumetric production significantly decreased. Nevertheless, the rainfall that was produced by mesoscale convective weather systems in the drought year accounted for most of the precipitation received during the critical crop growth period.It is concluded that mesoscale convective weather systems may be a crucial precipitation-producing deterrent to drought and an important mechanism for enhancing midsummer crop growth throughout the midwestern United States. Furthermore, because mesoscale convective weather systems account for such a large fraction of the warm-season precipitation, significant improvements in prediction of such systems would likely translate into significant improvements in quantitative precipitation forecast skill and corresponding improvements in hydrologic forecasts of runoff.

  11. Heavy rain forecasts in mesoscale convective system in July 2016 in Belarus

    NASA Astrophysics Data System (ADS)

    Lapo, Palina; Barodka, Siarhei; Krasouski, Aliaksandr

    2017-04-01

    During the last decade, the frequency of severe weather phenomena, such as heavy precipitation, hail and squalls, over Europe is observed to increase, which is attributed to climate change in the region. Such hazardous weather events over the territory of Belarus every year, having significant economic and social effects. Of special interest for further studies are mesoscale convective systems, which can be described as long-lived cloud complexes including groups of cumulonimbus clouds and squall lines. Passage of such systems is accompanied with intense thunderstorms, showers and squally wind. In this study, we investigate a case of Mesoscale Convective System (MCS) passage over the territory of Belarus, which occurred 13 July 2016. During this Mesoscale Convective Complex passage, heavy precipitation (up to 43 mm), squally winds and intense thunderstorms have been observed. Another feature of this MCS was the hook-shaped weather radar signature known as a "hook echo", seen on the Doppler weather radar Minsk-2. Tornadoes and powerful mesocyclones are often characterized by the presence of a hook echo on radar. Also we have performed simulations of the convective complex passage with the WRF-ARW mesoscale atmospheric modelling system using 6 different microphysics parameterizations. Our main objectives are to study the conditions of this Mesoscale Convective Systems (MCSs) development, to consider the microphysical structure of clouds in the MCS, and to identify which microphysics package provides the best forecast of precipitation for this case of MCS in terms of its geographical distribution and precipitation amount in towns and cities where highest levels of precipitation have been observed. We present analysis of microphysical structure of this MCS along with evaluation of precipitation forecasts obtained with different microphysics parametrizations as compared to real observational data. In particular, we may note that results of almost all microphysics simulations indicate underestimation of precipitation areas in the region of interest.

  12. Evaluation of ERA-Interim precipitation data in complex terrain

    NASA Astrophysics Data System (ADS)

    Gao, Lu; Bernhardt, Matthias; Schulz, Karsten

    2013-04-01

    Precipitation controls a large variety of environmental processes, which is an essential input parameter for land surface models e.g. in hydrology, ecology and climatology. However, rain gauge networks provides the necessary information, are commonly sparse in complex terrains, especially in high mountainous regions. Reanalysis products (e.g. ERA-40 and NCEP-NCAR) as surrogate data are increasing applied in the past years. Although they are improving forward, previous studies showed that these products should be objectively evaluated due to their various uncertainties. In this study, we evaluated the precipitation data from ERA-Interim, which is a latest reanalysis product developed by ECMWF. ERA-Interim daily total precipitation are compared with high resolution gridded observation dataset (E-OBS) at 0.25°×0.25° grids for the period 1979-2010 over central Alps (45.5-48°N, 6.25-11.5°E). Wet or dry day is defined using different threshold values (0.5mm, 1mm, 5mm, 10mm and 20mm). The correspondence ratio (CR) is applied for frequency comparison, which is the ratio of days when precipitation occurs in both ERA-Interim and E-OBS dataset. The result shows that ERA-Interim captures precipitation occurrence very well with a range of CR from 0.80 to 0.97 for 0.5mm to 20mm thresholds. However, the bias of intensity increases with rising thresholds. Mean absolute error (MAE) varies between 4.5 mm day-1 and 9.5 mm day-1 in wet days for whole area. In term of mean annual cycle, ERA-Interim almost has the same standard deviation of the interannual variability of daily precipitation with E-OBS, 1.0 mm day-1. Significant wet biases happened in ERA-Interim throughout warm season (May to August) and dry biases in cold season (November to February). The spatial distribution of mean annual daily precipitation shows that ERA-Interim significant underestimates precipitation intensity in high mountains and northern flank of Alpine chain from November to March while pronounced overestimate in the southern flank of Alps. The poor topographical and flow related characteristic representation of ERA-Interim model is possibly responsible for the bias. Particularly, the mountain block effect of moisture is weak captured. The comparison demonstrates that ERA-Interim precipitation intensity needs bias correction for further alpine climate studies, although it reasonably captures precipitation frequency. This critical evaluation not only diagnosed the data quality of ERA-Interim, but also provided the evidence for reanalysis products downscaling and bias correction in complex terrain.

  13. PROCESS FOR RECOVERY OF URANIUM VALUES FROM IMPURE SOLUTIONS THEREOF

    DOEpatents

    Kilner, S.B.

    1959-11-01

    A process is presented for the recovery of uraninm values from impure solutions which are obtained, for example, by washing residual uranium salt or uranium metal deposits from stainless steel surfaces using an aqueous or certain acidic aqueous solutions. The solutions include uranyl and oxidized iron, chromium, nickel, and copper ions and may contain manganese, zinc, and silver ions. In accordance with one procedure. the uranyl ions are reduced to the uranous state, and the impurity ions are complexed with cyanide under acidic conditions. The solution is then treated with ammonium hydroxide or alkali metal hydroxide to precipitate uranous hydroxide away from the complexed impurity ions in the solution. Alternatively, an excess of alkali metal cyanide is added to the reduced solution until the solution becomes sufficiently alkaline for the uranons hydroxide to precipitate. An essential feature in operating the process is in maintaining the pH of the solution sufficiently acid during the complexing operation to prevent the precipitation of the impurity metal hydroxides.

  14. The enthalpies of interactions of Ca2+(aq) and C2O{4/2-} (aq) ions in complexon solutions: Competition between complexation and precipitation

    NASA Astrophysics Data System (ADS)

    Kustov, A. V.; Smirnova, N. L.; Berezin, B. D.; Trostin, V. N.

    2010-04-01

    The thermal effects of mixing of aqueous calcium chloride with sodium citrate and ethylenedi-aminetetraacetate in the absence and presence of sodium oxalate have been measured at 25°C. The thermal effects of dilution of aqueous calcium chloride solutions were determined. The thermal effects of calcium oxalate precipitation and formation of calcium complexes with citrate and ethylenediaminetetraacetate ions were calculated. The 1% solution of sodium citrate inhibited the formation of CaC2O4 (s); in a 1% solution of sodium ethylenediaminetetraacetate with [Ca2+][C2O{4/2-}] > 10-5, the endothermal formation of the [CaEdta]2- complex quickly changed to exothermal precipitation. The 3 and 5% solutions of complexons showed a pronounced inhibiting effect on the formation of urinary stones even when the concentration of calcium and oxalate ions in solution exceeded the product of solubility of CaC2O4 by four and more orders of magnitude.

  15. PROCESS OF RECOVERING URANIUM

    DOEpatents

    Kilner, S.B.

    1959-12-29

    A method is presented for separating and recovering uranium from a complex mixure of impurities. The uranium is dissolved to produce an aqueous acidic solution including various impurities. In accordance with one method, with the uranium in the uranyl state, hydrogen cyanide is introduced into the solution to complex the impurities. Subsequently, ammonia is added to the solution to precipitate the uraniunn as ammonium diuranate away from the impurities in the solution. Alternatively, the uranium is precipitated by adding an alkaline metal hydroxide. In accordance with the second method, the uranium is reduced to the uranous state in the solution. The reduced solution is then treated with solid alkali metal cyanide sufficient to render the solution about 0.1 to 1.0 N in cyanide ions whereat cyanide complex ions of the metal impurities are produced and the uranium is simultaneously precipituted as uranous hydroxide. Alternatively, hydrogen cyanide may be added to the reduced solution and the uranium precipitated subsequently by adding ammonium hydroxide or an alkali metal hydroxide. Other refinements of the method are also disclosed.

  16. Importance of orographic precipitation to the water resources of Monteverde, Costa Rica

    NASA Astrophysics Data System (ADS)

    Guswa, Andrew J.; Rhodes, Amy L.; Newell, Silvia E.

    2007-10-01

    Monteverde, Costa Rica harbors montane forests that exemplify the delicate balances among climate, hydrology, habitat, and development. Most of the annual precipitation to this region arrives during the wet season, but the importance of orographic precipitation during the dry and transitional seasons should not be underestimated. Development associated with ecotourism has put significant stress on water resources, and recent work has shown evidence that changes in regional land-cover and global climate may lead to reduced precipitation and cloud cover and a subsequent decline in endemic species. Precipitation samples collected from 2003 to 2005 reveal a seasonal signal in stable isotope composition, as measured by δ 18O and δ 2H, that is heaviest during the dry and transitional seasons. Attenuated versions of this signal propagate through to stream samples and provide a means of determining the importance of precipitation delivered by the trade winds during the dry and transitional seasons to water resources for the region. Results from six catchments on the leeward slope indicate that topography exerts a strong control on the importance of orographic precipitation to stream baseflow. The contributions are greatest in those catchments that are close to the Brillante Gap in the Continental Divide. Differences in the temporal variation of precipitation and streamflow isotope compositions provide insight to the hydrologic pathways that move water to the streams.

  17. Why pleiotropic interventions are needed for Alzheimer's disease.

    PubMed

    Frautschy, Sally A; Cole, Greg M

    2010-06-01

    Alzheimer's disease (AD) involves a complex pathological cascade thought to be initially triggered by the accumulation of beta-amyloid (Abeta) peptide aggregates or aberrant amyloid precursor protein (APP) processing. Much is known of the factors initiating the disease process decades prior to the onset of cognitive deficits, but an unclear understanding of events immediately preceding and precipitating cognitive decline is a major factor limiting the rapid development of adequate prevention and treatment strategies. Multiple pathways are known to contribute to cognitive deficits by disruption of neuronal signal transduction pathways involved in memory. These pathways are altered by aberrant signaling, inflammation, oxidative damage, tau pathology, neuron loss, and synapse loss. We need to develop stage-specific interventions that not only block causal events in pathogenesis (aberrant tau phosphorylation, Abeta production and accumulation, and oxidative damage), but also address damage from these pathways that will not be reversed by targeting prodromal pathways. This approach would not only focus on blocking early events in pathogenesis, but also adequately correct for loss of synapses, substrates for neuroprotective pathways (e.g., docosahexaenoic acid), defects in energy metabolism, and adverse consequences of inappropriate compensatory responses (aberrant sprouting). Monotherapy targeting early single steps in this complicated cascade may explain disappointments in trials with agents inhibiting production, clearance, or aggregation of the initiating Abeta peptide or its aggregates. Both plaque and tangle pathogenesis have already reached AD levels in the more vulnerable brain regions during the "prodromal" period prior to conversion to "mild cognitive impairment (MCI)." Furthermore, many of the pathological events are no longer proceeding in series, but are going on in parallel. By the MCI stage, we stand a greater chance of success by considering pleiotropic drugs or cocktails that can independently limit the parallel steps of the AD cascade at all stages, but that do not completely inhibit the constitutive normal functions of these pathways. Based on this hypothesis, efforts in our laboratories have focused on the pleiotropic activities of omega-3 fatty acids and the anti-inflammatory, antioxidant, and anti-amyloid activity of curcumin in multiple models that cover many steps of the AD pathogenic cascade (Cole and Frautschy, Alzheimers Dement 2:284-286, 2006).

  18. Temporal and Spatial Patterns of Preferential Flow Occurrence in the Shale Hills Catchment: From the Hillslope to the Catchment Scales

    NASA Astrophysics Data System (ADS)

    Liu, H.; Lin, H.

    2013-12-01

    Understanding temporal and spatial patterns of preferential flow (PF) occurrence is important in revealing hillslope and catchment hydrologic and biogeochemical processes. Quantitative assessment of the frequency and control of PF occurrence in the field, however, has been limited, especially at the landscape scale of hillslope and catchment. By using 5.5-years' (2007-2012) real-time soil moisture at 10 sites response to 323 precipitation events, we tested the temporal consistency of PF occurrence at the hillslope scale in the forested Shale Hills Catchment; and by using 25 additional sites with at least 1-year data (2011-2012), we evaluated the spatial patterns of PF occurrence across the catchment. To explore the potential effects of PF occurrence on catchment hydrology, wavelet analysis was performed on the recorded time series of hydrological signals (i.e., precipitation, soil moisture, catchment discharge). Considerable temporal consistence was observed in both the frequency and the main controls of PF occurrence at the hillslope scale, which was attributed largely to the statistical stability of precipitation pattern over the monitoring period and the relatively stable subsurface preferential pathways. Preferential flow tended to occur more often in response to intense rainfall events, and favored the conditions at dry hilltop or wet valley floor sites. When upscaling to the entire catchment, topographic control on the PF occurrence was amplified remarkably, leading to the identification of a subsurface PF network in the catchment. Higher frequency of PF occurrence was observed at the valley floor (average 48%), hilltop (average 46%), and swales/hillslopes near the stream (average 40%), while the hillslopes in the eastern part of the catchment were least likely to experience PF (0-20%). No clear relationship, however, was observed between terrain attributes and PF occurrence, because the initiation and persistency of PF in this catchment was controlled jointly by complex interactions among landform units, soil types, initial soil moisture, precipitation features, and season. Through the wavelet method (coherence spectrum and phase differences), dual-pore filtering effects of soil system were proven, rendering it possible to further infer characteristic properties of the underlying hydrological processes in the subsurface. We found that preferential flow dominates the catchment discharge response at short-time periods (< 3 days), while the matrix flow may dominate the discharge response at the time scales of around 10-12 days. The temporal and spatial patterns of PF occurrence revealed in this study can help advance the modeling and prediction of complex PF dynamics in this and other similar landscapes.

  19. Neural network potential for Al-Mg-Si alloys

    NASA Astrophysics Data System (ADS)

    Kobayashi, Ryo; Giofré, Daniele; Junge, Till; Ceriotti, Michele; Curtin, William A.

    2017-10-01

    The 6000 series Al alloys, which include a few percent of Mg and Si, are important in automotive and aviation industries because of their low weight, as compared to steels, and the fact their strength can be greatly improved through engineered precipitation. To enable atomistic-level simulations of both the processing and performance of this important alloy system, a neural network (NN) potential for the ternary Al-Mg-Si has been created. Training of the NN uses an extensive database of properties computed using first-principles density functional theory, including complex precipitate phases in this alloy. The NN potential accurately reproduces most of the pure Al properties relevant to the mechanical behavior as well as heat of solution, solute-solute, and solute-vacancy interaction energies, and formation energies of small solute clusters and precipitates that are required for modeling the early stage of precipitation and mechanical strengthening. This success not only enables future detailed studies of Al-Mg-Si but also highlights the ability of NN methods to generate useful potentials in complex alloy systems.

  20. Silaffins in Silica Biomineralization and Biomimetic Silica Precipitation

    PubMed Central

    Lechner, Carolin C.; Becker, Christian F. W.

    2015-01-01

    Biomineralization processes leading to complex solid structures of inorganic material in biological systems are constantly gaining attention in biotechnology and biomedical research. An outstanding example for biomineral morphogenesis is the formation of highly elaborate, nano-patterned silica shells by diatoms. Among the organic macromolecules that have been closely linked to the tightly controlled precipitation of silica in diatoms, silaffins play an extraordinary role. These peptides typically occur as complex posttranslationally modified variants and are directly involved in the silica deposition process in diatoms. However, even in vitro silaffin-based peptides alone, with and without posttranslational modifications, can efficiently mediate biomimetic silica precipitation leading to silica material with different properties as well as with encapsulated cargo molecules of a large size range. In this review, the biomineralization process of silica in diatoms is summarized with a specific focus on silaffins and their in vitro silica precipitation properties. Applications in the area of bio- and nanotechnology as well as in diagnostics and therapy are discussed. PMID:26295401

  1. Microbiological reduction of Sb(V) in anoxic freshwater sediments

    USGS Publications Warehouse

    Oremland, Ronald S.; Kulp, Thomas R.; Miller, Laurence G.; Braiotta, Franco; Webb, Samuel M.; Kocar, Benjamin D; Blum, Jodi S.

    2014-01-01

    Microbiological reduction of millimolar concentrations of Sb(V) to Sb(III) was observed in anoxic sediments from two freshwater settings: (1) a Sb- and As-contaminated mine site (Stibnite Mine) in central Idaho and 2) an uncontaminated suburban lake (Searsville Lake) in the San Francisco Bay Area. Rates of Sb(V) reduction in anoxic sediment microcosms and enrichment cultures were enhanced by amendment with lactate or acetate as electron donors but not by H2, and no reduction occurred in sterilized controls. Addition of 2-14C-acetate to Stibnite Mine microcosms resulted in the production of 14CO2 coupled to Sb(V) reduction, suggesting that this process proceeds by a dissimilatory respiratory pathway in those sediments. Antimony(V) reduction in Searsville Lake sediments was not coupled to acetate mineralization and may be associated with Sb-resistance. The microcosms and enrichment cultures also reduced sulfate, and the precipitation of insoluble Sb(III)-sulfide complexes was a major sink for reduced Sb. The reduction of Sb(V) by Stibnite Mine sediments was inhibited by As(V), suggesting that As(V) is a preferred electron acceptor for the indigenous community. These findings indicate a novel pathway for anaerobic microbiological respiration and suggest that communities capable of reducing high concentrations of Sb(V) commonly occur naturally in the environment.

  2. Study on preparation and formation mechanism of n-alkanol/water emulsion using alpha-cyclodextrin.

    PubMed

    Hashizaki, Kaname; Kageyama, Takashi; Inoue, Motoki; Taguchi, Hiroyuki; Ueda, Haruhisa; Saito, Yoshihiro

    2007-11-01

    Surfactants are usually used for the preparation of emulsions; however, some have an adverse effect on the human body such as skin irritation, hemolysis, and protein denaturation, etc. In this study, we examined the preparation and formation mechanism of n-alkanol/water emulsions using alpha-cyclodextrin (alpha-CD) as an emulsifier. Emulsions were prepared by mixing oil and water phases for 4 min at 2500 rpm using a vortex mixer. The mechanism of emulsification was investigated with some physico-chemical techniques. From phase diagrams of n-alkanol/alpha-CD/water systems, the emulsion phase extended as the chain length of n-alkanols and the amount of alpha-CD added increased. Furthermore, the emulsion was not formed in the region where the n-alkanol/alpha-CD complex didn't precipitate; however, the emulsion was formed in the region where the complex precipitated. In addition, it was clear that the emulsions have a yield stress value and correspond to the Maxwell model from rheological measurement. Our experiments clearly showed that the stable emulsions are formed because the precipitated complexes form a dense film at the oil-water interface and prevent aggregation among dispersed phases. Furthermore, it is suggested that the creation of a three-dimensional network structure formed by precipitated complexes in the continuous phase contributes to the stabilization of the emulsion. Thus, we concluded that the n-alkanol/water emulsions using alpha-cyclodextrin were a kind of the Pickering emulsion.

  3. Pathways to Firesetting for Mentally Disordered Offenders: A Preliminary Examination.

    PubMed

    Tyler, Nichola; Gannon, Theresa A

    2017-06-01

    The current study aimed to investigate the specific pathways in the offence process for mentally disordered firesetters. In a previous study, an offence chain model was constructed (i.e., the Firesetting Offence Chain for Mentally Disordered Offenders, FOC-MD) using offence descriptions obtained from 23 mentally disordered firesetters, detailing the sequence of contextual, behavioural, affective, and cognitive factors that precipitate an incidence of firesetting for this population. The current study examines the prevalence of the specific pathways to firesetting for the original 23 mentally disordered firesetters and a further sample of 13 mentally disordered firesetters. Three distinct pathways to firesetting are identified within the FOC-MD: fire interest-childhood mental health, no fire interest-adult mental health, fire interest-adult mental health. In this article, we describe these three pathways in detail using illustrative case studies. The practice implications of these identified pathways are also discussed.

  4. Synoptic Drivers of Precipitation in the Atlantic Sector of the Arctic

    NASA Astrophysics Data System (ADS)

    Cohen, L.; Hudson, S.; Graham, R.; Renwick, J. A.

    2017-12-01

    Precipitation in the Arctic has been shown to be increasing in recent decades, from both observational and modelling studies, with largest trends seen in autumn and winter. This trend is attributed to a combination of the warming atmosphere and reduced sea ice extent. The seasonality of precipitation in the Arctic is important as it largely determines whether the precipitation falls as snow or rain. This study assesses the spatial and temporal variability of the synoptic drivers of precipitation in the Atlantic (European) sector of the Arctic. This region of the Arctic is of particular interest as it has the largest inter-annual variability in sea ice extent and is the primary pathway for moisture transport into the Arctic from lower latitudes. This study uses the ECMWF ERA-I reanalysis total precipitation to compare to long-term precipitation observations from Ny Ålesund, Svalbard to show that the reanalysis captures the synoptic variability of precipitation well and that most precipitation in this region is synoptically driven. The annual variability of precipitation in the Atlantic Arctic shows strong regionality. In the Svalbard and Barents Sea region, most of the annual total precipitation occurs during autumn and winter (Oct-Mar) (>60% of annual total), while the high-Arctic (> 80N) and Kara Sea receives most of the annual precipitation ( 60% of annual total) during summer (July-Sept). Using a synoptic classification developed for this region, this study shows that winter precipitation is driven by winter cyclone occurrence, with strong correlations to the AO and NAO indices. High precipitation over Svalbard is also strongly correlated with the Scandinavian blocking pattern, which produces a southerly flow in the Greenland Sea/Svalbard area. An increasing occurrence of these synoptic patterns are seen for winter months (Nov and Jan), which may explain much of the observed winter increase in precipitation.

  5. Kinetics of Fe Release from Organic Ligand Complexes: Implications for Fe Isotopes?

    NASA Astrophysics Data System (ADS)

    Nuester, J.; Liermann, L. J.; Brantley, S. L.

    2006-12-01

    Although iron is the fourth most abundant element in the earth's surface, its bioavailability is limited by its natural tendency to form insoluble iron (oxyhydr)oxides in terrestrial and marine environments. Paradoxically, iron is an essential nutrient for virtually all living cells, so in order to survive, organisms must develop mechanisms to solubilize iron. To acquire iron, organisms synthesize and release iron-specific chelators called siderophores. These siderophores facilitate the transformation of insoluble crystal-bound iron to organically ligand-bound dissolved iron. The reverse process whereby ferric iron is released from siderophores resulting in the precipitation of iron (oxyhydr)oxides or complexation by other iron chelators is an important but not well studied process in the B-horizon of soils. Fe mobility is documented in soils where Fe is often extracted at the top and precipitated at depth. Both the concentration and isotopic signature of Fe varies with depth due to dissolution, precipitation, sorption, and biological processes. Our study is focused on measurement of isotopic fractionation during this reverse process. In a first approach to understand iron liberation form organic ligands, we mimic this process using a reductive mechanism. We use acetohydroxamic acid (aha), EDTA and desferrioxamine B (DFMB) as test ligands to investigate iron release by sodium ascorbate at varying pH. Our first kinetic measurements showed significant differences in iron release depending on pH and stability of the iron complex. Within one hour all iron is released from aha with a small pH effect in the pH range between 4 and 6. In contrast, the pH has a major influence on the iron release from EDTA and DFMB. Depending on pH, total iron is released from EDTA within 24 hours, while only an incomplete iron release from DFMB could be observed within two weeks. These strong kinetic differences in iron release as a consequence of iron reduction are expected to result in significant iron isotope effects, and we are testing for these effects. For example, we expect to see enrichment of light isotopes in the early released fractions as iron is reduced (like effects observed by Wiederhold et al. (2006) for ligand-controlled and reductive dissolution of goethite). Such kinetic isotope effects should be particularly strong for iron release from siderophores with high Fe affinities like DFMB (log ß_(Fe(III)) = 30.60). We are also investigating other mechanisms to liberate iron from organic ligands including a pathway with extracellular iron reductases.

  6. THE GRAVIMETRIC DETERMINATION OF MOLYBDENUM IN URANIUM-MOLYBDENUM ALLOYS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    None

    1959-03-01

    The sample is dissolved in nitric and hydrochloric acids. After heating the solution with sulfuric acid, molybodenum is precipitated as the benzoin-oxime complex which is ignited to molybdic oxide. This is dissolved in ammonia, and the molybdenum is precipitated and weighed as lead molybdate. (auth)

  7. Interaction of Uranium with Bacterial Cell Surfaces: Inferences from Phosphatase-Mediated Uranium Precipitation.

    PubMed

    Kulkarni, Sayali; Misra, Chitra Seetharam; Gupta, Alka; Ballal, Anand; Apte, Shree Kumar

    2016-08-15

    Deinococcus radiodurans and Escherichia coli expressing either PhoN, a periplasmic acid phosphatase, or PhoK, an extracellular alkaline phosphatase, were evaluated for uranium (U) bioprecipitation under two specific geochemical conditions (GCs): (i) a carbonate-deficient condition at near-neutral pH (GC1), and (ii) a carbonate-abundant condition at alkaline pH (GC2). Transmission electron microscopy revealed that recombinant cells expressing PhoN/PhoK formed cell-associated uranyl phosphate precipitate under GC1, whereas the same cells displayed extracellular precipitation under GC2. These results implied that the cell-bound or extracellular location of the precipitate was governed by the uranyl species prevalent at that particular GC, rather than the location of phosphatase. MINTEQ modeling predicted the formation of predominantly positively charged uranium hydroxide ions under GC1 and negatively charged uranyl carbonate-hydroxide complexes under GC2. Both microbes adsorbed 6- to 10-fold more U under GC1 than under GC2, suggesting that higher biosorption of U to the bacterial cell surface under GC1 may lead to cell-associated U precipitation. In contrast, at alkaline pH and in the presence of excess carbonate under GC2, poor biosorption of negatively charged uranyl carbonate complexes on the cell surface might have resulted in extracellular precipitation. The toxicity of U observed under GC1 being higher than that under GC2 could also be attributed to the preferential adsorption of U on cell surfaces under GC1. This work provides a vivid description of the interaction of U complexes with bacterial cells. The findings have implications for the toxicity of various U species and for developing biological aqueous effluent waste treatment strategies. The present study provides illustrative insights into the interaction of uranium (U) complexes with recombinant bacterial cells overexpressing phosphatases. This work demonstrates the effects of aqueous speciation of U on the biosorption of U and the localization pattern of uranyl phosphate precipitated as a result of phosphatase action. Transmission electron microscopy revealed that location of uranyl phosphate (cell associated or extracellular) was primarily influenced by aqueous uranyl species present under the given geochemical conditions. The data would be useful for understanding the toxicity of U under different geochemical conditions. Since cell-associated precipitation of metal facilitates easy downstream processing by simple gravity-based settling down of metal-loaded cells, compared to cumbersome separation techniques, the results from this study are of considerable relevance to effluent treatment using such cells. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  8. Interaction of Uranium with Bacterial Cell Surfaces: Inferences from Phosphatase-Mediated Uranium Precipitation

    PubMed Central

    Kulkarni, Sayali; Misra, Chitra Seetharam; Gupta, Alka; Ballal, Anand

    2016-01-01

    ABSTRACT Deinococcus radiodurans and Escherichia coli expressing either PhoN, a periplasmic acid phosphatase, or PhoK, an extracellular alkaline phosphatase, were evaluated for uranium (U) bioprecipitation under two specific geochemical conditions (GCs): (i) a carbonate-deficient condition at near-neutral pH (GC1), and (ii) a carbonate-abundant condition at alkaline pH (GC2). Transmission electron microscopy revealed that recombinant cells expressing PhoN/PhoK formed cell-associated uranyl phosphate precipitate under GC1, whereas the same cells displayed extracellular precipitation under GC2. These results implied that the cell-bound or extracellular location of the precipitate was governed by the uranyl species prevalent at that particular GC, rather than the location of phosphatase. MINTEQ modeling predicted the formation of predominantly positively charged uranium hydroxide ions under GC1 and negatively charged uranyl carbonate-hydroxide complexes under GC2. Both microbes adsorbed 6- to 10-fold more U under GC1 than under GC2, suggesting that higher biosorption of U to the bacterial cell surface under GC1 may lead to cell-associated U precipitation. In contrast, at alkaline pH and in the presence of excess carbonate under GC2, poor biosorption of negatively charged uranyl carbonate complexes on the cell surface might have resulted in extracellular precipitation. The toxicity of U observed under GC1 being higher than that under GC2 could also be attributed to the preferential adsorption of U on cell surfaces under GC1. This work provides a vivid description of the interaction of U complexes with bacterial cells. The findings have implications for the toxicity of various U species and for developing biological aqueous effluent waste treatment strategies. IMPORTANCE The present study provides illustrative insights into the interaction of uranium (U) complexes with recombinant bacterial cells overexpressing phosphatases. This work demonstrates the effects of aqueous speciation of U on the biosorption of U and the localization pattern of uranyl phosphate precipitated as a result of phosphatase action. Transmission electron microscopy revealed that location of uranyl phosphate (cell associated or extracellular) was primarily influenced by aqueous uranyl species present under the given geochemical conditions. The data would be useful for understanding the toxicity of U under different geochemical conditions. Since cell-associated precipitation of metal facilitates easy downstream processing by simple gravity-based settling down of metal-loaded cells, compared to cumbersome separation techniques, the results from this study are of considerable relevance to effluent treatment using such cells. PMID:27287317

  9. URANIUM RECOVERY PROCESS

    DOEpatents

    Bailes, R.H.; Long, R.S.; Olson, R.S.; Kerlinger, H.O.

    1959-02-10

    A method is described for recovering uranium values from uranium bearing phosphate solutions such as are encountered in the manufacture of phosphate fertilizers. The solution is first treated with a reducing agent to obtain all the uranium in the tetravalent state. Following this reduction, the solution is treated to co-precipitate the rcduced uranium as a fluoride, together with other insoluble fluorides, thereby accomplishing a substantially complete recovery of even trace amounts of uranium from the phosphate solution. This precipitate usually takes the form of a complex fluoride precipitate, and after appropriate pre-treatment, the uranium fluorides are leached from this precipitate and rccovered from the leach solution.

  10. Interstitial-phase precipitation in iron-base alloys: a comparative study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Pelton, A.R.

    1982-06-01

    Recent developments have elucidated the atomistic mechanisms of precipitation of interstitial elements in simple alloy systems. However, in the more technologically important iron base alloys, interstitial phase precipitation is generally not well understood. The present experimental study was therefore designed to test the applicability of these concepts to more complex ferrous alloys. Hence, a comparative study was made of interstitial phase precipitation in ferritic Fe-Si-C and in austenitic phosphorus-containing Fe-Cr-Ni steels. These systems were subjected to a variety of quench-age thermal treatments, and the microstructural development was subsequently characterized by transmission electron microscopy.

  11. Syn-metamorphic interconnected porosity during blueschist facies reactive fluid fluxes at the slab-mantle interface

    NASA Astrophysics Data System (ADS)

    Konrad-Schmolke, Matthias; Klitscher, Nicolai; Halama, Ralf; Wirth, Richard; Morales, Luiz

    2017-04-01

    At the slab-mantle interface in subdution zones fluids released from the downgoing plate infiltrate into a mechanical mixture of rocks with different chemical compositions, different hydration states and different rheological behaviour resulting in a highly reactive mélange within a steep temperature gradient. Fluid pathways, reaction mechanisms and reaction rates of such fluxes, however, are poorly known, although these parameters are thought to be crucial for several seismic phenomena, such as those commonly referred to as slow earthquakes (e.g., episodic tremor and slip (ETS)). We discovered syn-metamorphic fluid-pathways in the form of interconnected metamorphic porosity in eclogite and blueschist facies mélange rocks from the Franciscan Complex near Jenner, CA. The sampled rocks occur as rigid mafic blocks of different sizes (cm to decametre) in a weak chlorite-serpentine matrix interpreted to be an exhumed slab-mantle interface. Some of these mafic blocks record reactive fluid infiltration that transforms dry eclogite into hydrous blueschist with a sharp reaction front clearly preserved and visible from outcrop- down to µm-scale. We can show that a number of interconnected fluid pathways, such as interconnected metamorphic porosity between reacting omphacite and newly formed sodic amphibole enabled fluid infiltration and interface coupled solution-reprecipitation reactions at blueschist facies conditions. We investigated the different types of fluid pathways with TEM and visualized their interconnectivity with 3D focused ion beam (FIB) sections. The eclogitic parts of the samples preserve porous primary omphacite as a product of amphibole and epidote breakdown during subduction. This primary porosity in omphacite I results from a negative volume change in the solids during amphibole and epidote dehydration. The resulting pores appear as (fluid filled) elongated inclusions the orientations of which are controlled by the omphacite lattice. During decompression of the rocks these inclusions became interconnected by brittle fractures that allowed a first fluid influx and the precipitation of new omphacite (II) within the fracture network and along the rims of the primary omphacite. The (second) metamorphic/metasomatic porosity occurs along the reaction surfaces between omphacite and sodic amphibole as well as within omphacite grains where new omphacite (III) is formed. This interconnected pore network associated with the re-hydration reaction is up to 1µm but mostly between 50 and 200nm wide. Reacting omphacite is preferentially consumed in 00-1 direction and has a rugged, often needle-like surface. In contrast, product surfaces (omphacite III and sodic amphibole) are relatively smooth indicating dissolution of older omphacite (I and II) and re-precipitation of omphacite III as well as the formation of sodic amphibole. Within some of the pores amorphous silica-rich material containing smaller amounts of Al, Ca, Fe and Mg, can be found as worm-like precipitates and as coatings on top of the needle-like omphacite surface. Phase relations, textures as well as overprinting relations clearly show that the porosity is syn-metamorphic under blueschist-facies conditions. Although difficult to constrain in the samples porosity is likely between 1-5 volume%.

  12. Sensitivity of Precipitation in Coupled Land-Atmosphere Models

    NASA Technical Reports Server (NTRS)

    Neelin, David; Zeng, N.; Suarez, M.; Koster, R.

    2004-01-01

    The project objective was to understand mechanisms by which atmosphere-land-ocean processes impact precipitation in the mean climate and interannual variations, focusing on tropical and subtropical regions. A combination of modeling tools was used: an intermediate complexity land-atmosphere model developed at UCLA known as the QTCM and the NASA Seasonal-to-Interannual Prediction Program general circulation model (NSIPP GCM). The intermediate complexity model was used to develop hypotheses regarding the physical mechanisms and theory for the interplay of large-scale dynamics, convective heating, cloud radiative effects and land surface feedbacks. The theoretical developments were to be confronted with diagnostics from the more complex GCM to validate or modify the theory.

  13. Responses of Mean and Extreme Precipitation to Deforestation in the Maritime Continent

    NASA Astrophysics Data System (ADS)

    Chen, C. C.; Lo, M. H.; Yu, J. Y.

    2017-12-01

    Anthropogenic land use and land cover change, including tropical deforestation, could have substantial effects on local surface energy and water budgets, and thus on the atmospheric stability which may result in changes in precipitation. Maritime Continent has undergone severe deforestation in recent decades but has received less attention than Amazon or Congo rainforests. Therefore, this study is to decipher the precipitation response to deforestation in the Maritime Continent. We conduct deforestation experiments using Community Earth System Model (CESM) and through converting the tropical rainforest into grassland. The results show that deforestation in Maritime Continent leads to an increase in both mean temperature and mean precipitation. Moisture budget analysis indicates that the increase in precipitation is associated with the vertically integrated vertical moisture advection, especially the dynamic component (changes in convection). In addition, through moist static energy (MSE) budget analysis, we find the atmosphere among deforested areas become unstable owing to the combined effects of positive specific humidity anomalies at around 850 hPa and anomalous warming extended from the surface to 750 hPa. This instability will induce anomalous ascending motion, which could enhance the low-level moisture convergence, providing water vapor from the surrounding warm ocean. To further evaluate the precipitation response to deforestation, we examine the precipitation changes under La Niña events and global warming scenario using CESM Atmospheric Model Intercomparison Project (AMIP) simulations and Representative Concentration Pathway (RCP) 8.5 simulations. We find that the precipitation increase caused by deforestation in Maritime Continent is comparable in magnitude to that generated by either natural variability or global warming forcing. Besides the changes in mean precipitation, preliminary results show the extreme precipitation also increases. We will further explore how the extreme precipitation changes with the deforestation forcing.

  14. Nonstationarity in timing of extreme precipitation across China and impact of tropical cyclones

    NASA Astrophysics Data System (ADS)

    Gu, Xihui; Zhang, Qiang; Singh, Vijay P.; Shi, Peijun

    2017-02-01

    This study examines the seasonality and nonstationarity in the timing of extreme precipitation obtained by annual maximum (AM) sampling and peak-over-threshold (POT) sampling techniques using circular statistics. Daily precipitation data from 728 stations with record length of at least 55 years across China were analyzed. In general, the average seasonality is subject mainly to summer season (June-July - August), which is potentially related to East Asian monsoon and Indian monsoon activities. The strength of precipitation seasonality varied across China with the highest strength being in northeast, north, and central-north China; whereas the weakest seasonality was found in southeast China. There are three seasonality types: circular uniform, reflective symmetric, and asymmetric. However, the circular uniform seasonality of extreme precipitation was not detected at stations across China. The asymmetric distribution was observed mainly in southeast China, and the reflective distribution of precipitation extremes was also identified the other regions besides the above-mentioned regions. Furthermore, a strong signal of nonstationarity in the seasonality was detected at half of the weather stations considered in the study, exhibiting a significant shift in the timing of extreme precipitation, and also significant trends in the average and strength of seasonality. Seasonal vapor flux and related delivery pathways and also tropical cyclones (TCs) are most probably the driving factors for the shifts or changes in the seasonality of extreme precipitation across China. Timing of precipitation extremes is closely related to seasonal shifts of floods and droughts and which means much for management of agricultural irrigation and water resources management. This study sheds new light on nonstationarity in timing of precipitation extremes which differs from existing ones which focused on precipitation extremes from perspective of magnitude and intensity.

  15. Controls of precipitation δ18O on the northwestern Tibetan Plateau: A case study at Ngari station

    NASA Astrophysics Data System (ADS)

    Guo, Xiaoyu; Tian, Lide; Wen, Rong; Yu, Wusheng; Qu, Dongmei

    2017-06-01

    The shifting atmospheric circulation between the Indian monsoon and the westerlies on the northwestern Tibetan Plateau (TP) influences precipitation as well as precipitation isotopes. Isotopic records will therefore show historical fluctuations. To understand better the factors controlling present day precipitation δ18O values on the northwestern TP, we made continuous observations of precipitation isotopes at Ngari station from 2010 to 2013. The drivers of precipitation δ18O were investigated using analyses of their statistical relations with temperature, precipitation amount, relative humidity, and convective activities based on outgoing longwave radiation (OLR) data from NOAA satellites, and downward shortwave radiation (DSR) data collected at the Ngari automatic weather station. Atmospheric circulation patterns from NCAR reanalysis, and moisture transport paths of individual events derived from the HYSPLIT model using NCEP data, were also used to trace moisture sources. The results of our study include: (1) The slope and intercept of the Local Meteoric Water Line (LMWL) at Ngari (δD = 8.51 δ18O + 11.57 (R2 = 0.97, p < 0.01)) were higher than for the Global Meteoric Water Line (GMWL), indicating drier local climatic conditions; (2) Precipitation δ18O values showed a weak ;temperature effect; and a weak ;precipitation amount effect; at Ngari; and (3) Convection (or temperature patterns) integrated over several days (0-20) preceding each event were determined to be the main driver of precipitation isotopic values in monsoon (or non-monsoon) season. The longer (shorter) periods of τm days when correlation coefficients between precipitation δ18O and OLR were at their maxima (minima) indicate deep convective activities (shorter moisture transportation pathways) in August (June, July, and September).

  16. Do climate model predictions agree with long-term precipitation trends in the arid southwestern United States?

    NASA Astrophysics Data System (ADS)

    Elias, E.; Rango, A.; James, D.; Maxwell, C.; Anderson, J.; Abatzoglou, J. T.

    2016-12-01

    Researchers evaluating climate projections across southwestern North America observed a decreasing precipitation trend. Aridification was most pronounced in the cold (non-monsoonal) season, whereas downward trends in precipitation were smaller in the warm (monsoonal) season. In this region, based upon a multimodel mean of 20 Coupled Model Intercomparison Project 5 models using a business-as-usual (Representative Concentration Pathway 8.5) trajectory, midcentury precipitation is projected to increase slightly during the monsoonal time period (July-September; 6%) and decrease slightly during the remainder of the year (October-June; -4%). We use observed long-term (1915-2015) monthly precipitation records from 16 weather stations to investigate how well measured trends corroborate climate model predictions during the monsoonal and non-monsoonal timeframe. Running trend analysis using the Mann-Kendall test for 15 to 101 year moving windows reveals that half the stations showed significant (p≤0.1), albeit small, increasing trends based on the longest term record. Trends based on shorter-term records reveal a period of significant precipitation decline at all stations representing the 1950s drought. Trends from 1930 to 2015 reveal significant annual, monsoonal and non-monsoonal increases in precipitation (Fig 1). The 1960 to 2015 time window shows no significant precipitation trends. The more recent time window (1980 to 2015) shows a slight, but not significant, increase in monsoonal precipitation and a larger, significant decline in non-monsoonal precipitation. GCM precipitation projections are consistent with more recent trends for the region. Running trends from the most recent time window (mid-1990s to 2015) at all stations show increasing monsoonal precipitation and decreasing Oct-Jun precipitation, with significant trends at 6 of 16 stations. Running trend analysis revealed that the long-term trends were not persistent throughout the series length, but depended on the period examined. Recent trends in Southwest precipitation are directionally consistent with anthropogenic climate change.

  17. Identification of rat serum alkaline phosphatase isoenzyme by means of wheat germ agglutinin.

    PubMed

    Wada, H; Niwa, N; Hayakawa, T; Tsuge, H

    1997-01-01

    Wheat germ agglutinin (WGA) precipitates bone type serum alkaline phosphatase (sALP) isoenzyme specifically. The precipitates are composed of the macromolecules of WGA and "bone type sALP" (WGA-ALP complex). In order to use bone type sALP as a marker in polyacrylamide gel electrophoresis (PAGE), a method to separate "bone type sALP" from the "WGA-ALP complex" was established by using N-acetyl-D-glucosamine (GlcNAc)-Sepharose 6E column chromatography. It was concluded that this method is useful for clinical examination in the rat.

  18. Multiscale characterization and mechanical modeling of an Al-Zn-Mg electron beam weld

    NASA Astrophysics Data System (ADS)

    Puydt, Quentin; Flouriot, Sylvain; Ringeval, Sylvain; Parry, Guillaume; De Geuser, Frédéric; Deschamps, Alexis

    Welding of precipitation hardening alloys results in multi-scale microstructural heterogeneities, from the hardening nano-scale precipitates to the micron-scale solidification structures and to the component geometry. This heterogeneity results in a complex mechanical response, with gradients in strength, stress triaxiality and damage initiation sites.

  19. Liesegang banding and multiple precipitate formation in cobalt phosphate systems

    NASA Astrophysics Data System (ADS)

    Karam, Tony; El-Rassy, Houssam; Zaknoun, Farah; Moussa, Zeinab; Sultan, Rabih

    2012-02-01

    We study a cobalt phosphate Liesegang pattern from cobalt(II) and phosphate ions in a 1D tube. The system yields a complex, multi-component pattern. Characterization of the different precipitates by FTIR, SEM and XRD reveals that they are cobalt phosphate polymorphs with different degrees of hydration.

  20. Autism and Phthalate Metabolite Glucuronidation

    ERIC Educational Resources Information Center

    Stein, T. Peter; Schluter, Margaret D.; Steer, Robert A.; Ming, Xue

    2013-01-01

    Exposure to environmental chemicals may precipitate autism spectrum disorders (ASD) in genetically susceptible children. Differences in the efficiency of the glucuronidation process may substantially modulate substrate concentrations and effects. To determine whether the efficiency of this pathway is compromised in children with ASD, we measured…

  1. Observed heavy precipitation increase confirms theory and early model

    NASA Astrophysics Data System (ADS)

    Fischer, E. M.; Knutti, R.

    2016-12-01

    Environmental phenomena are often first observed, and then explained or simulated quantitatively. The complexity and diversity of processes, the range of scales involved, and the lack of first principles to describe many processes make it challenging to predict conditions beyond the ones observed. Here we use the intensification of heavy precipitation as a counterexample, where seemingly complex and potentially computationally intractable processes to first order manifest themselves in simple ways: the intensification of heavy precipitation is now emerging in the observed record across many regions of the world, confirming both theory and a variety of model predictions made decades ago, before robust evidence arose from observations. We here compare heavy precipitation changes over Europe and the contiguous United States across station series and gridded observations, theoretical considerations and multi-model ensembles of GCMs and RCMs. We demonstrate that the observed heavy precipitation intensification aggregated over large areas agrees remarkably well with Clausius-Clapeyron scaling. The observed changes in heavy precipitation are consistent yet somewhat larger than predicted by very coarse resolution GCMs in the 1980s and simulated by the newest generation of GCMs and RCMs. For instance the number of days with very heavy precipitation over Europe has increased by about 45% in observations (years 1981-2013 compared to 1951-1980) and by about 25% in the model average in both GCMs and RCMs, although with substantial spread across models and locations. As the anthropogenic climate signal strengthens, there will be more opportunities to test climate predictions for other variables against observations and across a hierarchy of different models and theoretical concepts. *Fischer, E.M., and R. Knutti, 2016, Observed heavy precipitation increase confirms theory and early models, Nature Climate Change, in press.

  2. Numerical modeling of mineral dissolution - precipitation kinetics integrating interfacial processes

    NASA Astrophysics Data System (ADS)

    Azaroual, M. M.

    2016-12-01

    The mechanisms of mineral dissolution/precipitation are complex and interdependent. Within a same rock, the geochemical modelling may have to manage kinetic reactions with high ratios between the most reactive minerals (i.e., carbonates, sulfate salts, etc.) and less reactive minerals (i.e., silica, alumino-silicates, etc.). These ratios (higher than 10+6) induce numerical instabilities for calculating mass and energy transfers between minerals and aqueous phases at the appropriate scales of time and space. The current scientific debate includes: i) changes (or not) of the mineral reactive surface with the progress of the dissolution/precipitation reactions; ii) energy jumps (discontinuity) in the thermodynamic affinity function of some dissolution/precipitation reactions and iii) integration of processes at the "mineral - aqueous solution" interfaces for alumino-silicates, silica and carbonates. In recent works dealing with the specific case of amorphous silica, measurements were performed on nano-metric cross-sections indicating the presence of surface layer between the bulk solution and the mineral. This thin layer is composed by amorphous silica and hydrated silica "permeable" to the transfer of water and ionic chemical constituents. The boundary/interface between the initial mineral and the silica layer is characterized by a high concentration jump of chemical products at the nanoscale and some specific interfacial dissolution/precipitation processes.In this study, the results of numerical simulations dealing with different mechanisms of silicate and carbonate dissolution/precipitation reactions and integrating interfacial processes will be discussed. The application of this approach to silica precipitation is based on laboratory experiments and it highlights the significant role of the "titration" surface induced by surface complexation reactions in the determination of the kinetics of precipitation.

  3. Characterisation of a complex thin walled structure fabricated by selective laser melting using a ferritic oxide dispersion strengthened steel

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Boegelein, Thomas, E-mail: t.boegelein@liv.ac.uk; Louvis, Eleftherios; Dawson, Karl

    2016-02-15

    Oxide dispersion strengthened (ODS) alloys exhibit superior mechanical and physical properties due to the presence of nanoscopic Y(Al, Ti) oxide precipitates, but their manufacturing process is complex. The present study is aimed at further investigation of the application of an alternative, Additive Manufacturing (AM) technique, Selective Laser Melting (SLM), to the production of consolidated ODS alloy components. Mechanically alloyed PM2000 (ODS-FeCrAl) powders have been consolidated and a fine dispersion of Y-containing precipitates were observed in an as built thin-walled component, but these particles were typically poly-crystalline and contained a variety of elements including O, Al, Ti, Cr and Fe. Applicationmore » of post-build heat treatments resulted in the modification of particle structures and compositions; in the annealed condition most precipitates were transformed to single crystal yttrium aluminium oxides. During the annealing treatment, precipitate distributions homogenised and localised variations in number density were diminished. The resulting volume fractions of those precipitates were 25–40% lower than have been reported in conventionally processed PM2000, which was attributed to Y-rich slag-like surface features and inclusions formed during SLM. - Highlights: • A wall structure was grown from ODS steel powder using selective laser melting. • A fine dispersion of nano-precipitates was apparent in as-build material. • Precipitates were multi-phased containing several elements, e.g. O, Ti, Al, Fe, Cr, Y. • Post-build annealing changed those into typically single-crystalline Y–Al–O. • The anneal also reduced and stabilised the volume fraction of precipitates to ~ 0.006.« less

  4. Analysis of aerosol-cloud-precipitation interactions based on MODIS data

    NASA Astrophysics Data System (ADS)

    Cheng, Feng; Zhang, Jiahua; He, Junliang; Zha, Yong; Li, Qiannan; Li, Yunmei

    2017-01-01

    Aerosols exert an indirect impact on climate change via its impact on clouds by altering its radiative and optical properties which, in turn, changes the process of precipitation. Over recent years how to study the indirect climate effect of aerosols has become an important research topic. In this study we attempted to understand the complex mutual interactions among aerosols, clouds and precipitation through analysis of the spatial correlation between aerosol optical depth (AOD), cloud effective radius (CER) and precipitation during 2000-2012 in central-eastern China that has one of the highest concentrations of aerosols globally. With the assistance of moderate resolution imaging spectroradiometer (MODIS)-derived aerosol and cloud product data, this analysis focuses on regional differentiation and seasonal variation of the correlation in which in situ observed precipitation was incorporated. On the basis of the achieved results, we proposed four patterns depicting the mutual interactions between aerosols, clouds and precipitation. They characterize the indirect effects of aerosols on the regional scale. These effects can be summarized as complex seasonal variations and north-south regional differentiation over the study area. The relationship between AOD and CER is predominated mostly by the first indirect effect (the negative correlation between AOD and CER) in the north of the study area in the winter and spring seasons, and over the entire study area in the summer season. The relationship between CER and precipitation is dominated chiefly by the second indirect effect (the positive correlation between CER and precipitation) in the northern area in summer and over the entire study area in autumn. It must be noted that aerosols are not the factor affecting clouds and rainfall singularly. It is the joint effect of aerosols with other factors such as atmospheric dynamics that governs the variation in clouds and rainfall.

  5. Precipitation Estimate Using NEXRAD Ground-Based Radar Images: Validation, Calibration and Spatial Analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhang, Xuesong

    2012-12-17

    Precipitation is an important input variable for hydrologic and ecological modeling and analysis. Next Generation Radar (NEXRAD) can provide precipitation products that cover most of the continental United States with a high resolution display of approximately 4 × 4 km2. Two major issues concerning the applications of NEXRAD data are (1) lack of a NEXRAD geo-processing and geo-referencing program and (2) bias correction of NEXRAD estimates. In this chapter, a geographic information system (GIS) based software that can automatically support processing of NEXRAD data for hydrologic and ecological models is presented. Some geostatistical approaches to calibrating NEXRAD data using rainmore » gauge data are introduced, and two case studies on evaluating accuracy of NEXRAD Multisensor Precipitation Estimator (MPE) and calibrating MPE with rain-gauge data are presented. The first case study examines the performance of MPE in mountainous region versus south plains and cold season versus warm season, as well as the effect of sub-grid variability and temporal scale on NEXRAD performance. From the results of the first case study, performance of MPE was found to be influenced by complex terrain, frozen precipitation, sub-grid variability, and temporal scale. Overall, the assessment of MPE indicates the importance of removing bias of the MPE precipitation product before its application, especially in the complex mountainous region. The second case study examines the performance of three MPE calibration methods using rain gauge observations in the Little River Experimental Watershed in Georgia. The comparison results show that no one method can perform better than the others in terms of all evaluation coefficients and for all time steps. For practical estimation of precipitation distribution, implementation of multiple methods to predict spatial precipitation is suggested.« less

  6. Impact of the surface wind flow on precipitation characteristics over the southern Himalayas: GPM observations

    NASA Astrophysics Data System (ADS)

    Zhang, Aoqi; Fu, Yunfei; Chen, Yilun; Liu, Guosheng; Zhang, Xiangdong

    2018-04-01

    The distribution and influence of precipitation over the southern Himalayas have been investigated on regional and global scales. However, previous studies have been limited by the insufficient emphasis on the precipitation triggers or the lack of droplet size distribution (DSD) data. Here, precipitating systems were identified using Global Precipitation Mission dual-frequency radar data, and then categorized into five classes according to surface flow from the European Centre for Medium-Range Weather Forecast Interim data. The surface flow is introduced to indicate the precipitation triggers, which is validated in this study. Using case and statistical analysis, we show that the precipitating systems with different surface flow had different precipitation characteristics, including spatio-temporal features, reflectivity profile, DSD, and rainfall intensity. Furthermore, the results show that the source of the surface flow influences the intensity and DSD of precipitation. The terrain exerts different impacts on the precipitating systems of five categories, leading to various distributions of precipitation characteristics over the southern Himalayas. Our results suggest that the introduction of surface flow and DSD for precipitating systems provides insight into the complex precipitation of the southern Himalayas. The different characteristics of precipitating systems may be caused by the surface flow. Therefore, future study on the orographic precipitations should take account the impact of the surface flow and its relevant dynamic mechanism.

  7. Biogenic hardparts: Difficult archives of the geological past (Invited)

    NASA Astrophysics Data System (ADS)

    Immenhauser, A.; Schone, B. R.; Hoffmann, R.; Niedermayr, A.

    2013-12-01

    Biomineralized exo- or endoskeletons of fossil marine invertebrates are widespread and diverse components of the Phanerozoic rock record of Earth's past and present oceans. Exoskeletons serve as protection against environmental pressure or predators, whilst endoskeletons can act as support or serve as an attachment for muscles and ligaments and hence as a mechanism for transmitting muscular forces. Biogenic hard parts represent sophisticated products resulting from the hierarchical interaction of inorganic minerals (95%) and macromolecular organic matrices, forming commonly less than 5%. The significance of many biogenic carbonate archives lies in the time-resolved growth patterns and their ability to record ambient environmental conditions in the form of multiple geochemical properties (multi-proxy archives) that have been widely used to assess past oceanic seawater properties. Here, we compile and review published work dealing with crystallization pathways of skeletal hard parts secreted by mollusks (i.e., bivalves and cephalopods) as well as brachiopods as widely used archives of ancient neritic epeiric settings. Bivalves and cephalopods (e.g., extinct ammonoids and belemnites and extant Sepia, Nautilus and Spirula) all form accretionary calcitic, aragonitic or vateritic skeletal hard parts. Despite the fact that mollusks and brachiopods form part of very different branches of the animal phylogenetic tree, their biomineralization strategies are surprisingly similar. Our main focus lies in a critical assessment of the complex pathways of ions and aquo-complexes from their source (seawater) to the final product (biomineral). We do this as an attempt to critically test the commonly held hypothesis that many fossil hard parts precipitated (under favorable conditions and pending subsequent diagenetic alteration) in equilibrium with seawater. Two main observations stand out: (1) the present knowledge on pathways and mechanisms (e.g., ion channel trans-membrane or endocytosis and vesicle transport, precursor mineralogies etc.) is surprisingly incomplete and in many cases based on descriptive rather than mechanistic approaches; (2) in analogy to all metazoans, biomineralization processes of mollusks and brachiopods are complex and involve different mechanisms for different elements. The combined uptake of specific elements both from inorganic and metabolic sources represents a major problem. Despite all of these problems, field experiments document that these biominerals respond to the aquatic geochemistry and the physical properties (temperature, salinity, pH etc.) of their environment, albeit in a more complex manner than conventionally assumed. Significant advances in multi-proxy research, however, require a more holistic view of the physico-chemical and biological processes involved. The present contribution represents a first tentative step towards this goal.

  8. Mollusc and brachiopod skeletal hardparts: Problematic archives of past seawater properties (Invited)

    NASA Astrophysics Data System (ADS)

    Immenhauser, A.; Schone, B. R.; Hoffmann, R.; Niedermayr, A.

    2013-12-01

    Biomineralized exo- or endoskeletons of fossil marine invertebrates are widespread and diverse components of the Phanerozoic rock record of Earth's past and present oceans. Exoskeletons serve as protection against environmental pressure or predators, whilst endoskeletons may act as support or serves as an attachment for muscles and ligaments and hence as a mechanism for transmitting muscular forces. Biogenic hardparts represent sophisticated products resulting from the hierarchical interaction of inorganic minerals (95%) and macromolecular organic matrix, forming commonly less than 5%. The significance of biogenic carbonate archives lies in the time-resolved growth-increments and their respective multi-proxy geochemical signatures that have been widely used to assess past oceanic seawater properties. We here compile and review published work dealing with crystallization pathways of skeletal hardparts secreted by molluscs (i.e., bivalves and cephalopods) as well as brachiopods as widely used archives of ancient neritic epeiric settings. Bivalves and cephalopods (e.g., extinct ammonoids and belemnites and extant Sepia, Nautilus and Spirula) all form accretionary calcitic, aragonitic or vateritic skeletal hardparts. Despite the fact that molluscs and brachiopods form part of very different branches of the animal phylogenetic tree, their biomineralization strategies are surprisingly similar. Our main focus lies in a critical assessment of the complex pathways of ions and aquo-complexes from their source (seawater) to the final product (biomineral). We do this as an attempt to critically test the commonly held hypothesis that many fossil shell hardparts precipitated, under favourable conditions and pending subsequent diagenetic alteration, in equilibrium with seawater. Two main observations stand out: (1) the present knowledge on pathways and mechanisms (e.g., ion channel trans-membrane or endocytosis and vesicle transport, precursor mineralogies etc.) is surprisingly incomplete and in many cases based on descriptive rather than mechanistic approaches; (2) in analogy to all metazoans, biomineralization processes of molluscs and brachiopods are complex and involve different mechanisms for different elements. The combined uptake of specific elements both from inorganic and metabolic sources represents a major problem. Despite all of these problems, field experiments document that these biominerals respond to the aquatic geochemistry and the physical properties (temperature, salinity, pH etc.) of their environment, albeit in a more complex manner than conventionally assumed. Significant advances in multi-proxy research, however, require a more holistic view of the physico-chemical and biological processes involved. The present contribution represents a first tentative step towards this goal.

  9. Developing precipitation hardenable high entropy alloys

    NASA Astrophysics Data System (ADS)

    Gwalani, Bharat

    High entropy alloys (HEAs) is a concept wherein alloys are constructed with five or more elements mixed in equal proportions; these are also known as multi-principle elements (MPEs) or complex concentrated alloys (CCAs). This PhD thesis dissertation presents research conducted to develop precipitation-hardenable high entropy alloys using a much-studied fcc-based equi-atomic quaternary alloy (CoCrFeNi). Minor additions of aluminium make the alloy amenable for precipitating ordered intermetallic phases in an fcc matrix. Aluminum also affects grain growth kinetics and Hall-Petch hardenability. The use of a combinatorial approach for assessing composition-microstructure-property relationships in high entropy alloys, or more broadly in complex concentrated alloys; using laser deposited compositionally graded AlxCrCuFeNi 2 (0 < x < 1.5) complex concentrated alloys as a candidate system. The composition gradient has been achieved from CrCuFeNi2 to Al 1.5CrCuFeNi2 over a length of ˜25 mm, deposited using the laser engineered net shaping process from a blend of elemental powders. With increasing Al content, there was a gradual change from an fcc-based microstructure (including the ordered L12 phase) to a bcc-based microstructure (including the ordered B2 phase), accompanied with a progressive increase in microhardness. Based on this combinatorial assessment, two promising fcc-based precipitation strengthened systems have been identified; Al0.3CuCrFeNi2 and Al0.3CoCrFeNi, and both compositions were subsequently thermo-mechanically processed via conventional techniques. The phase stability and mechanical properties of these alloys have been investigated and will be presented. Additionally, the activation energy for grain growth as a function of Al content in these complex alloys has also been investigated. Change in fcc grain growth kinetic was studied as a function of aluminum; the apparent activation energy for grain growth increases by about three times going from Al0.1CoCrFeNi (3% Al (at%)) to Al0.3CoCrFeNi. (7% Al (at%)). Furthermore, Al addition leads to the precipitation of highly refined ordered L12 (gamma') and B2 precipitates in Al0.3CoCrFeNi. A detailed investigation of precipitation of the ordered phases in Al0.3CoCrFeNi and their thermal stability is done using atom probe tomography (APT), transmission electron microscopy (TEM) and Synchrotron X-ray in situ and ex situ analyses. The alloy strengthened via grain boundary strengthening following the Hall-Petch relationship offers a large increment of strength with small variation in grain size. Tensile strength of the Al0.3CoFeNi is increased by 50% on precipitation fine-scale gamma' precipitates. Furthermore, precipitation of bcc based ordered phase B2 in Al0.3CoCrFeNi can further strengthen the alloy. Fine-tuning the microstructure by thermo-mechanical treatments achieved a wide range of mechanical properties in the same alloy. The Al0.3CoCrFeNi HEA exhibited ultimate tensile strength (UTS) of ˜250 MPa and ductility of ˜65%; a UTS of ˜1100 MPa and ductility of ˜30%; and a UTS of 1850 MPa and a ductility of 5% after various thermo-mechanical treatments. Grain sizes, precipitates type and size scales manipulated in the alloy result in different strength ductility combinations. Henceforth, the alloy presents a fertile ground for development by grain boundary strengthening and precipitation strengthening, and offers very high activation energy of grain growth aptly suitable for high-temperature applications.

  10. Assessment of atmospheric moisture transport patterns through the northeastern US, 1900-2016

    NASA Astrophysics Data System (ADS)

    Teale, N. G.; Robinson, D. A.

    2017-12-01

    Atmospheric moisture dictates precipitation on the ground; therefore, changes in precipitation such as those observed in the northeastern US must be linked to changes in atmospheric moisture. However, little attention has been paid to the changes in the atmospheric moisture in this region. This research fills this gap by identifying pathways of atmospheric moisture transport in and through the northeastern US and assessing how those patterns have changed throughout the twentieth century. Moisture transport patterns are identified using integrated vapor transport (IVT) calculated from daily eastward and northward vertically integrated vapor fluxes for 1986—2016 at a spatial resolution of 0.75° × 0.75° from ERA-Interim Reanalysis. The study region is bounded by 36°N—51°N and 85°W—60°W. A self-organizing map (SOM) methodology is employed with the daily IVT data to produce a set of IVT maps identifying recurrent moisture transport patterns intersecting the northeastern US. IVT then is calculated identically from ERA-20C for 1900-2010. These daily data are sorted into the IVT pattern maps identified in the previous step, thus extending the dataset of northeastern moisture transport pathways through the 20th century. The overlap period of 6 years provides training and validation for the classification procedure; duplicates are removed. Trends in the frequency and characteristics of these patterns are analyzed through 116 year study period. Results from this study have indicated that atmospheric rivers play a non-negligible role in the supply of water vapor in the northeastern US. Additionally, the identification of distinct moisture transport pathways provides a baseline for identifying changes moisture transport in climate model projections, which may provide additional insight into the future precipitation regime of the northeastern US.

  11. Pathways to potentially preventable hospitalizations for diabetes and heart failure: a qualitative analysis of patient perspectives.

    PubMed

    Sentell, Tetine L; Seto, Todd B; Young, Malia M; Vawer, May; Quensell, Michelle L; Braun, Kathryn L; Taira, Deborah A

    2016-07-26

    Potentially preventable hospitalizations (PPH) for heart failure (HF) and diabetes mellitus (DM) cost the United States over $14 billion annually. Studies about PPH typically lack patient perspectives, especially across diverse racial/ethnic groups with known PPH health disparities. English-speaking individuals with a HF or DM-related PPH (n = 90) at the largest hospital in Hawai'i completed an in-person interview, including open-ended questions on precipitating factors to their PPH. Using the framework approach, two independent coders identified patient-reported factors and pathways to their PPH. Seventy-two percent of respondents were under 65 years, 30 % were female, 90 % had health insurance, and 66 % had previously been hospitalized for the same problem. Patients' stories identified immediate, precipitating, and underlying reasons for the admission. Underlying background factors were critical to understanding why patients had the acute problems necessitating their hospitalizations. Six, non-exclusive, underlying factors included: extreme social vulnerability (e.g., homeless, poverty, no social support, reported by 54 % of respondents); health system interaction issues (e.g., poor communication with providers, 44 %); limited health-related knowledge (42 %); behavioral health issues (e.g., substance abuse, mental illness, 36 %); denial of illness (27 %); and practical problems (e.g., too busy, 6 %). From these findings, we developed a model to understand an individual's pathways to a PPH through immediate, precipitating, and underlying factors, which could help identify potential intervention foci. We demonstrate the model's utility using five examples. In a young, predominately insured population, factors well outside the traditional purview of the hospital, or even clinical medicine, critically influenced many PPH. Patient perspectives were vital to understanding this issue. Innovative partnerships and policies should address these issues, including linkages to social services and behavioral health.

  12. Winter Precipitation in North America and the Pacific-North America Pattern in GEOS-S2Sv2 Seasonal Hindcast

    NASA Technical Reports Server (NTRS)

    Li, Zhao; Molod, Andrea; Schubert, Siegfried

    2018-01-01

    Reliable prediction of precipitation remains one of the most pivotal and complex challenges in seasonal forecasting. Previous studies show that various large-scale climate modes, such as ENSO, PNA and NAO play significant role in winter precipitation variability over the Northern America. The influences are most pronounced in years of strong indices of such climate modes. This study evaluates model bias, predictability and forecast skills of monthly winter precipitation in GEOS5-S2S 2.0 retrospective forecast from 1981 to 2016, with emphasis on the forecast skill of precipitation over North America during the extreme events of ENSO, PNA and NAO by applying EOF and composite analysis.

  13. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Warner, Thomas; Jalilehvand, Farideh

    Mercury(II) ions precipitate from aqueous cysteine (H 2Cys) solutions containing H 2Cys/Hg(II) mole ratio ≥ 2.0 as Hg( S-HCys) 2. In absence of additional cysteine, the precipitate dissolves at pH ~12 with the [Hg( S, N-Cys) 2] 2- complex dominating. With excess cysteine (H 2Cys/Hg(II) mole ratio ≥ 4.0), higher complexes form and the precipitate dissolves at lower pH values. Previously, we found that tetrathiolate [Hg( S-Cys) 4] 6- complexes form at pH = 11.0; in this work we extend the investigation to pH values of physiological interest. We examined two series of Hg(II)-cysteine solutions in which C Hg(II) variedmore » between 8 – 9 mM and 80 – 100 mM, respectively, with H 2Cys/Hg(II) mole ratios from 4 to ~20. The solutions were prepared in the pH range 7.1 – 8.8, at the pH at which the initial Hg( S-HCys) 2 precipitate dissolved. The variations in the Hg(II) speciation were followed by 199Hg NMR, X-ray absorption and Raman spectroscopic techniques. Our results show that in the dilute solutions (C Hg(II) = 8 – 9 mM), mixtures of di-, tri- (major) and tetrathiolate complexes exist at moderate cysteine excess (C H2Cys ~ 0.16 M) at pH 7.1. In the more concentrated solutions (C Hg(II) = 80 – 100 mM) with high cysteine excess (C H2Cys > 0.9 M), tetrathiolate [Hg( S-cysteinate) 4] m-6 ( m = 0 – 4) complexes dominate in the pH range 7.3 – 7.8, with lower charge than for the [Hg( S-Cys) 4] 6- complex due to protonation of some ( m) of the amino groups of the coordinated cysteine ligands. In conclusion, the results of this investigation could provide a key to the mechanism of biosorption and accumulation of Hg(II) ions in biological / environmental systems.« less

  14. Deformation twinning induced decomposition of lamellar LPSO structure and its re-precipitation in an Mg-Zn-Y alloy

    NASA Astrophysics Data System (ADS)

    Shao, X. H.; Zheng, S. J.; Chen, D.; Jin, Q. Q.; Peng, Z. Z.; Ma, X. L.

    2016-07-01

    The high hardness or yield strength of an alloy is known to benefit from the presence of small-scale precipitation, whose hardening effect is extensively applied in various engineering materials. Stability of the precipitates is of critical importance in maintaining the high performance of a material under mechanical loading. The long period stacking ordered (LPSO) structures play an important role in tuning the mechanical properties of an Mg-alloy. Here, we report deformation twinning induces decomposition of lamellar LPSO structures and their re-precipitation in an Mg-Zn-Y alloy. Using atomic resolution scanning transmission electron microscopy (STEM), we directly illustrate that the misfit dislocations at the interface between the lamellar LPSO structure and the deformation twin is corresponding to the decomposition and re-precipitation of LPSO structure, owing to dislocation effects on redistribution of Zn/Y atoms. This finding demonstrates that deformation twinning could destabilize complex precipitates. An occurrence of decomposition and re-precipitation, leading to a variant spatial distribution of the precipitates under plastic loading, may significantly affect the precipitation strengthening.

  15. Deformation twinning induced decomposition of lamellar LPSO structure and its re-precipitation in an Mg-Zn-Y alloy

    PubMed Central

    Shao, X. H.; Zheng, S. J.; Chen, D.; Jin, Q. Q.; Peng, Z. Z.; Ma, X. L.

    2016-01-01

    The high hardness or yield strength of an alloy is known to benefit from the presence of small-scale precipitation, whose hardening effect is extensively applied in various engineering materials. Stability of the precipitates is of critical importance in maintaining the high performance of a material under mechanical loading. The long period stacking ordered (LPSO) structures play an important role in tuning the mechanical properties of an Mg-alloy. Here, we report deformation twinning induces decomposition of lamellar LPSO structures and their re-precipitation in an Mg-Zn-Y alloy. Using atomic resolution scanning transmission electron microscopy (STEM), we directly illustrate that the misfit dislocations at the interface between the lamellar LPSO structure and the deformation twin is corresponding to the decomposition and re-precipitation of LPSO structure, owing to dislocation effects on redistribution of Zn/Y atoms. This finding demonstrates that deformation twinning could destabilize complex precipitates. An occurrence of decomposition and re-precipitation, leading to a variant spatial distribution of the precipitates under plastic loading, may significantly affect the precipitation strengthening. PMID:27435638

  16. Comparison of future and base precipitation anomalies by SimCLIM statistical projection through ensemble approach in Pakistan

    NASA Astrophysics Data System (ADS)

    Amin, Asad; Nasim, Wajid; Mubeen, Muhammad; Kazmi, Dildar Hussain; Lin, Zhaohui; Wahid, Abdul; Sultana, Syeda Refat; Gibbs, Jim; Fahad, Shah

    2017-09-01

    Unpredictable precipitation trends have largely influenced by climate change which prolonged droughts or floods in South Asia. Statistical analysis of monthly, seasonal, and annual precipitation trend carried out for different temporal (1996-2015 and 2041-2060) and spatial scale (39 meteorological stations) in Pakistan. Statistical downscaling model (SimCLIM) was used for future precipitation projection (2041-2060) and analyzed by statistical approach. Ensemble approach combined with representative concentration pathways (RCPs) at medium level used for future projections. The magnitude and slop of trends were derived by applying Mann-Kendal and Sen's slop statistical approaches. Geo-statistical application used to generate precipitation trend maps. Comparison of base and projected precipitation by statistical analysis represented by maps and graphical visualization which facilitate to detect trends. Results of this study projects that precipitation trend was increasing more than 70% of weather stations for February, March, April, August, and September represented as base years. Precipitation trend was decreased in February to April but increase in July to October in projected years. Highest decreasing trend was reported in January for base years which was also decreased in projected years. Greater variation in precipitation trends for projected and base years was reported in February to April. Variations in projected precipitation trend for Punjab and Baluchistan highly accredited in March and April. Seasonal analysis shows large variation in winter, which shows increasing trend for more than 30% of weather stations and this increased trend approaches 40% for projected precipitation. High risk was reported in base year pre-monsoon season where 90% of weather station shows increasing trend but in projected years this trend decreased up to 33%. Finally, the annual precipitation trend has increased for more than 90% of meteorological stations in base (1996-2015) which has decreased for projected year (2041-2060) up to 76%. These result revealed that overall precipitation trend is decreasing in future year which may prolonged the drought in 14% of weather stations under study.

  17. Superstrength of nanograined steel with nanoscale intermetallic precipitates transformed from shock-compressed martensitic steel

    PubMed Central

    Yu, Hailiang; Yan, Ming; Lu, Cheng; Tieu, Anh Kiet; Li, Huijun; Zhu, Qiang; Godbole, Ajit; Li, Jintao; Su, Lihong; Kong, Charlie

    2016-01-01

    An increasing number of industrial applications need superstrength steels. It is known that refined grains and nanoscale precipitates can increase strength. The hardest martensitic steel reported to date is C0.8 steel, whose nanohardness can reach 11.9 GPa through incremental interstitial solid solution strengthening. Here we report a nanograined (NG) steel dispersed with nanoscale precipitates which has an extraordinarily high hardness of 19.1 GPa. The NG steel (shock-compressed Armox 500T steel) was obtained under these conditions: high strain rate of 1.2 μs−1, high temperature rise rate of 600 Kμs−1 and high pressure of 17 GPa. The mean grain size achieved was 39 nm and reinforcing precipitates were indexed in the NG steel. The strength of the NG steel is expected to be ~3950 MPa. The discovery of the NG steel offers a general pathway for designing new advanced steel materials with exceptional hardness and excellent strength. PMID:27892460

  18. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wen, Haiming; van Rooyen, Isabella J.

    Here, detailed electron microscopy studies were performed to investigate the distribution and composition of fission products in the SiC layer of a tristructural isotropic coated particle exhibiting localized corrosion. Previous studies on this particle indicated that pure carbon areas in the SiC layer, resulting from localized corrosion of SiC by Pd, provide pathways for Ag, Cd and Cs migration. This study reveals the presence of Ag- and/or Cd-containing precipitates in un-corroded SiC areas. Ag/Cd may exist by themselves or coexist with Pd. Ag/Cd mainly transport along SiC grain boundaries. An Ag-Pd-Cd precipitate was identified at a stacking fault inside amore » SiC grain, suggesting that intragranular transport of Ag/Cd is possible. Ce is present with Pd or Pd-U in some precipitates >50 nm. U and Ce frequently coexist with each other, whereas Ag/Cd usually does not coexist with U or Ce. No Cs was detected in any precipitates in the areas examined.« less

  19. Winter North Atlantic Oscillation impact on European precipitation and drought under climate change

    NASA Astrophysics Data System (ADS)

    Tsanis, I.; Tapoglou, E.

    2018-01-01

    The North Atlantic Oscillation (NAO) is responsible for the climatic variability in the Northern Hemisphere, in particular, in Europe and is related to extreme events, such as droughts. The purpose of this paper is to study the correlation between precipitation and winter (December-January-February-March (DJFM)) NAO both for the historical period (1951-2000) and two future periods (2001-2050 and 2051-2100). NAO is calculated for these three periods by using sea level pressure, while precipitation data from seven climate models following the representative concentration pathway (RCP) 8.5 are also used in this study. An increasing trend in years with positive DJFM NAO values in the future is defined by this data, along with higher average DJFM NAO values. The correlation between precipitation and DJFM NAO is high, especially in the Northern (high positive) and Southern Europe (high negative). Therefore, higher precipitation in Northern Europe and lower precipitation in Southern Europe are expected in the future. Cross-spectral analysis between precipitation and DJFM NAO time series in three different locations in Europe revealed the best coherence in a dominant cycle between 3 and 4 years. Finally, the maximum drought period in terms of consecutive months with drought is examined in these three locations. The results can be used for strategic planning in a sustainable water resources management plan, since there is a link between drought events and NAO.

  20. Spatial stabilization and intensification of moistening and drying rate patterns under future climate change

    NASA Astrophysics Data System (ADS)

    Chavaillaz, Yann; Joussaume, Sylvie; Bony, Sandrine; Braconnot, Pascale

    2016-08-01

    Precipitation projections are usually presented as the change in precipitation between a fixed current baseline and a particular time in the future. However, upcoming generations will be affected in a way probably more related to the moving trend in precipitation patterns, i.e. to the rate and the persistence of regional precipitation changes from one generation to the next, than to changes relative to a fixed current baseline. In this perspective, we propose an alternative characterization of the future precipitation changes predicted by general circulation models, focusing on the precipitation difference between two subsequent 20-year periods. We show that in a business-as-usual emission pathway, the moistening and drying rates increase by 30-40 %, both over land and ocean. As we move further over the twenty-first century, more regions exhibit a significant rate of precipitation change, while the patterns become geographically stationary and the trends persistent. The stabilization of the geographical rate patterns that occurs despite the acceleration of global warming can be physically explained: it results from the increasing contribution of thermodynamic processes compared to dynamic processes in the control of precipitation change. We show that such an evolution is already noticeable over the last decades, and that it could be reversed if strong mitigation policies were quickly implemented. The combination of intensification and increasing persistence of precipitation rate patterns may affect the way human societies and natural ecosystems adapt to climate change, especially in the Mediterranean basin, in Central America, in South Asia and in the Arctic.

  1. Precipitation in the Karakoram-Himalaya: a CMIP5 view

    NASA Astrophysics Data System (ADS)

    Palazzi, Elisa; von Hardenberg, Jost; Terzago, Silvia; Provenzale, Antonello

    2015-07-01

    This work analyzes the properties of precipitation in the Hindu-Kush Karakoram Himalaya region as simulated by thirty-two state-of-the-art global climate models participating in the Coupled Model Intercomparison Project phase 5 (CMIP5). We separately consider the Hindu-Kush Karakoram (HKK) in the west and the Himalaya in the east. These two regions are characterized by different precipitation climatologies, which are associated with different circulation patterns. Historical model simulations are compared with the Climate Research Unit (CRU) and Global Precipitation Climatology Centre (GPCC) precipitation data in the period 1901-2005. Future precipitation is analyzed for the two representative concentration pathways (RCP) RCP 4.5 and RCP 8.5 scenarios. We find that the multi-model ensemble mean and most individual models exhibit a wet bias with respect to CRU and GPCC observations in both regions and for all seasons. The models differ greatly in the seasonal climatology of precipitation which they reproduce in the HKK. The CMIP5 models predict wetter future conditions in the Himalaya in summer, with a gradual precipitation increase throughout the 21st century. Wetter summer future conditions are also predicted by most models in the RCP 8.5 scenario for the HKK, while on average no significant change can be detected in winter precipitation for both regions. In general, no single model (or group of models) emerges as that providing the best results for all the statistics considered, and the large spread in the behavior of individual models suggests to consider multi-model ensemble means with extreme care.

  2. Requirement of the Mre11 complex and exonuclease 1 for activation of the Mec1 signaling pathway.

    PubMed

    Nakada, Daisuke; Hirano, Yukinori; Sugimoto, Katsunori

    2004-11-01

    The large protein kinases, ataxia-telangiectasia mutated (ATM) and ATM-Rad3-related (ATR), orchestrate DNA damage checkpoint pathways. In budding yeast, ATM and ATR homologs are encoded by TEL1 and MEC1, respectively. The Mre11 complex consists of two highly related proteins, Mre11 and Rad50, and a third protein, Xrs2 in budding yeast or Nbs1 in mammals. The Mre11 complex controls the ATM/Tel1 signaling pathway in response to double-strand break (DSB) induction. We show here that the Mre11 complex functions together with exonuclease 1 (Exo1) in activation of the Mec1 signaling pathway after DNA damage and replication block. Mec1 controls the checkpoint responses following UV irradiation as well as DSB induction. Correspondingly, the Mre11 complex and Exo1 play an overlapping role in activation of DSB- and UV-induced checkpoints. The Mre11 complex and Exo1 collaborate in producing long single-stranded DNA (ssDNA) tails at DSB ends and promote Mec1 association with the DSBs. The Ddc1-Mec3-Rad17 complex associates with sites of DNA damage and modulates the Mec1 signaling pathway. However, Ddc1 association with DSBs does not require the function of the Mre11 complex and Exo1. Mec1 controls checkpoint responses to stalled DNA replication as well. Accordingly, the Mre11 complex and Exo1 contribute to activation of the replication checkpoint pathway. Our results provide a model in which the Mre11 complex and Exo1 cooperate in generating long ssDNA tracts and thereby facilitate Mec1 association with sites of DNA damage or replication block.

  3. Duplex Heterogeneous Nucleation Behavior of Precipitates in C-Mn Steel Containing Sn

    NASA Astrophysics Data System (ADS)

    Sun, Guilin; Tao, Sufen

    2018-04-01

    The two successive heterogeneous nucleation behaviors of FeSn2-MnS-Al2O3 complex precipitates in ultrahigh Sn-bearing steel were investigated. First, Al2O3 was the nucleation site of the MnS at the end of solidification. Then, FeSn2 nucleated heterogeneously on the MnS particles that nucleated on the Al2O3 particles. The formation sequence of the precipitated phase caused the duplex heterogeneous nucleation to occur consecutively at most twice.

  4. Elucidating an Adverse Outcome Pathway of Microcephaly for use in Computational Toxicology (SOT Annual Meeting)

    EPA Science Inventory

    While evidence now supports a causal link between maternal Zika viral infection and microcephaly, genetic errors and chemical stressors may also precipitate this malformation through disruption of neuroprogenitor cell (NPC) proliferation, migration and differentiation in the earl...

  5. A ruthenium anticancer compound interacts with histones and impacts differently on epigenetic and death pathways compared to cisplatin

    PubMed Central

    Capuozzo, Antonelle; Ali, Moussa; Santamaria, Rita; Armant, Olivier; Delalande, Francois; Dorsselaer, Alain Van; Cianferani, Sarah; Spencer, John; Pfeffer, Michel; Mellitzer, Georg; Gaiddon, Christian

    2017-01-01

    Ruthenium complexes are considered as potential replacements for platinum compounds in oncotherapy. Their clinical development is handicapped by a lack of consensus on their mode of action. In this study, we identify three histones (H3.1, H2A, H2B) as possible targets for an anticancer redox organoruthenium compound (RDC11). Using purified histones, we confirmed an interaction between the ruthenium complex and histones that impacted on histone complex formation. A comparative study of the ruthenium complex versus cisplatin showed differential epigenetic modifications on histone H3 that correlated with differential expression of histone deacetylase (HDAC) genes. We then characterized the impact of these epigenetic modifications on signaling pathways employing a transcriptomic approach. Clustering analyses showed gene expression signatures specific for cisplatin (42%) and for the ruthenium complex (30%). Signaling pathway analyses pointed to specificities distinguishing the ruthenium complex from cisplatin. For instance, cisplatin triggered preferentially p53 and folate biosynthesis while the ruthenium complex induced endoplasmic reticulum stress and trans-sulfuration pathways. To further understand the role of HDACs in these regulations, we used suberanilohydroxamic acid (SAHA) and showed that it synergized with cisplatin cytotoxicity while antagonizing the ruthenium complex activity. This study provides critical information for the characterization of signaling pathways differentiating both compounds, in particular, by the identification of a non-DNA direct target for an organoruthenium complex. PMID:27935863

  6. Projected Changes in the Annual Cycle of Precipitation over Central Asia by CMIP5 Models

    NASA Astrophysics Data System (ADS)

    Yu, X.; Zhao, Y.

    2017-12-01

    Future changes in the annual cycle of the precipitation in central Asia (CA) were estimated based on the historical and Representative Concentration Pathway 8.5 (RCP8.5) experiments from 25 models of the Coupled Model Intercomparison Project phase 5 (CMIP5). Compared with the Global Precipitation Climatology Project (GPCP) observations, the historical (1979-1999) experiments showed that most models can capture the migration of rainfall centers, but remarkable discrepancies exist in the location and intensity of rainfall centers between simulations and observations. Considering the skill scores of precipitation and pattern correlations of circulations, which are closely related to the precipitation for each month, for the 25 models, the four best models (e.g., CanESM2, CMCC-CMS, MIROC5 and MPI-ESM-LR) with relatively good performance were selected. The four models' ensemble mean indicated that the migration and location of the precipitation centers were better reproduced, except the intensity of the centers was overestimated, compared with the result that only considered precipitation. Based on the four best models' ensemble mean under RCP8.5 scenarios, precipitation was projected to increase dramatically over most of the CA region in the boreal cold seasons (November, December, January, February, March, April and May) with the maximum in December in the end of twenty-first century (2079-2099), and several positive centers were located in the Pamirs Plateau and the Tianshan Mountains. By contrast, the precipitation changes were weak in the boreal warm seasons (June, July, August, September and October), with a wet center located in the northern Himalayas. Furthermore, there remain some uncertainties in the projected precipitation regions and periods obtained by comparing models' ensemble results of this paper and the results of previous studies. These uncertainties should be investigated in future work.

  7. Effects of Drought Manipulation on Soil Nitrogen Cycling: A Meta-Analysis

    NASA Astrophysics Data System (ADS)

    Homyak, Peter M.; Allison, Steven D.; Huxman, Travis E.; Goulden, Michael L.; Treseder, Kathleen K.

    2017-12-01

    Many regions on Earth are expected to become drier with climate change, which may impact nitrogen (N) cycling rates and availability. We used a meta-analytical approach on the results of field experiments that reduced precipitation and measured N supply (i.e., indices of N mineralization), soil microbial biomass, inorganic N pools (ammonium (NH4+) and nitrate (NO3-)), and nitrous oxide (N2O) emissions. We hypothesized that N supply and N2O emissions would be relatively insensitive to precipitation reduction and that reducing precipitation would increase extractable NH4+ and NO3- concentrations because microbial processes continue, whereas plant N uptake diminishes with drought. In support of this hypothesis, extractable NH4+ increased by 25% overall with precipitation reduction; NH4+ also increased significantly with increasing magnitude of precipitation reduction. In contrast, N supply and extractable NO3- did not change and N2O emissions decreased with reduced precipitation. Across studies microbial biomass appeared unchanged, yet from the diversity of studies, it was clear that proportionally smaller precipitation reductions increased microbial biomass, whereas larger proportional reductions in rainfall reduced microbial biomass; there was a positive intercept (P = 0.005) and a significant negative slope (P = 0.0002) for the regression of microbial biomass versus % precipitation reduction (LnR = -0.009 × (% precipitation reduction) + 0.4021). Our analyses imply that relative to other N variables, N supply is less sensitive to reduced precipitation, whereas processes producing N2O decline. Drought intensity and duration, through sustained N supply, may control how much N becomes vulnerable to loss via hydrologic and gaseous pathways upon rewetting dry soils.

  8. Precipitate shape fitting and reconstruction by means of 3D Zernike functions

    NASA Astrophysics Data System (ADS)

    Callahan, P. G.; De Graef, M.

    2012-01-01

    3D Zernike functions are defined and used for the reconstruction of precipitate shapes. These functions are orthogonal over the unit ball and allow for an arbitrary shape, scaled to fit inside an embedding sphere, to be decomposed into 3D harmonics. Explicit expressions are given for the general Zernike moments, correcting typographical errors in the literature. Explicit expressions of the Zernike moments for the ellipsoid and the cube are given. The 3D Zernike functions and moments are applied to the reconstruction of γ' precipitate shapes in two Ni-based superalloys, one with nearly cuboidal precipitate shapes, and one with more complex dendritic shapes.

  9. Applying complex networks to evaluate precipitation patterns over South America

    NASA Astrophysics Data System (ADS)

    Ciemer, Catrin; Boers, Niklas; Barbosa, Henrique; Kurths, Jürgen; Rammig, Anja

    2016-04-01

    The climate of South America exhibits pronounced differences between the wet- and the dry-season, which are accompanied by specific synoptic events like changes in the location of the South American Low Level Jet (SALLJ) and the establishment of the South American Convergence Zone (SACZ). The onset of these events can be related to the presence of typical large-scale precipitation patterns over South America, as previous studies have shown[1,2]. The application of complex network methods to precipitation data recently received increased scientific attention for the special case of extreme events, as it is possible with such methods to analyze the spatiotemporal correlation structure as well as possible teleconnections of these events[3,4]. In these approaches the correlation between precipitation datasets is calculated by means of Event Synchronization which restricts their applicability to extreme precipitation events. In this work, we propose a method which is able to consider not only extreme precipitation but complete time series. A direct application of standard similarity measures in order to correlate precipitation time series is impossible due to their intricate statistical properties as the large amount of zeros. Therefore, we introduced and evaluated a suitable modification of Pearson's correlation coefficient to construct spatial correlation networks of precipitation. By analyzing the characteristics of spatial correlation networks constructed on the basis of this new measure, we are able to determine coherent areas of similar precipitation patterns, spot teleconnections of correlated areas, and detect central regions for precipitation correlation. By analyzing the change of the network over the year[5], we are also able to determine local and global changes in precipitation correlation patterns. Additionally, global network characteristics as the network connectivity yield indications for beginning and end of wet- and dry season. In order to identify large-scale synoptic events like the SACZ and SALLJ onset, detecting the changes of correlation over time between certain regions is of significant relevance. [1] Nieto-Ferreira et al. Quarterly Journal of the Royal Meteorological Society (2011) [2] Vera et al. Bulletin of the American Meteorological Society (2006) [3] Quiroga et al. Physical review E (2002) [4] Boers et al. nature communications (2014) [5] Radebach et al. Physical review E (2013)

  10. Orographic Impacts on Liquid and Ice-Phase Precipitation Processes during OLYMPEX

    NASA Astrophysics Data System (ADS)

    Petersen, W. A.; Hunzinger, A.; Gatlin, P. N.; Wolff, D. B.

    2017-12-01

    The Global Precipitation Measurement (GPM) mission Olympic Mountains Experiment (OLYMPEX) focused on physical validation of GPM products in cold-season, mid-latitude frontal precipitation occurring over the Olympic Mountains of Washington State. Herein, we use data collected by the NASA S-band polarimetric radar (NPOL) to quantify and examine ice (IWP), liquid (LWP) and total water paths (TWP) relative to surface precipitation rates and column hydrometeor types for several cases occurring in different synoptic and/or Froude number regimes. These quantities are compared to coincident precipitation properties measured or estimated by GPM's Microwave Imager (GMI) and Dual-frequency Precipitation Radar (DPR). Because ice scattering is the dominant radiometric signature used by the GMI for estimating precipitation over land, and because the DPR is greatly affected by ground clutter in the lowest 1 - 2 km above ground, measurement limitations combined with orographic forcing may impact the degree to which DPR and/or GMI algorithms are able to adequately observe and estimate precipitation over and around orography.Preliminary case results suggest: 1) as expected, the Olympic Mountains force robust enhancements in the liquid and ice microphysical processes on windward slopes, especially in atmospheric river events; 2) localized orographic enhancements alter the balance of liquid and frozen precipitation contributions (IWP/TWP, LWP/TWP) to near surface rain rate, and for two cases examined thus far the balance seems to be sensitive to flow direction at specific intersections with the terrain orientation; and 3) GPM measurement limitations related to the depth of surface clutter impact for the DPR, and degree to which ice processes are coupled to the orographic rainfall process (DPR and GMI), especially along windward mountain slopes, may constrain the ability of retrieval algorithms to properly estimate near-surface precipitation quantities over complex terrain. Ongoing analysis of the OLMPEX dataset will better isolate controls on the orographic precipitation process, better define uncertainties in GPM measurements, and contribute to physically-based approaches for mitigating errors in estimation due to measurement and/or algorithm limitations over complex terrain.

  11. Contemporary Model Fidelity over the Maritime Continent: Examination of the Diurnal Cycle, Synoptic, Intraseasonal and Seasonal Variability

    NASA Astrophysics Data System (ADS)

    Baranowski, D.; Waliser, D. E.; Jiang, X.

    2016-12-01

    One of the key challenges in subseasonal weather forecasting is the fidelity in representing the propagation of the Madden-Julian Oscillation (MJO) across the Maritime Continent (MC). In reality both propagating and non-propagating MJO events are observed, but in numerical forecast the latter group largely dominates. For this study, comprehensive model performances are evaluated using metrics that utilize the mean precipitation pattern and the amplitude and phase of the diurnal cycle, with a particular focus on the linkage between a model's local MC variability and its fidelity in representing propagation of the MJO and equatorial Kelvin waves across the MC. Subseasonal to seasonal variability of mean precipitation and its diurnal cycle in 20 year long climate simulations from over 20 general circulation models (GCMs) is examined to benchmark model performance. Our results show that many models struggle to represent the precipitation pattern over complex Maritime Continent terrain. Many models show negative biases of mean precipitation and amplitude of its diurnal cycle; these biases are often larger over land than over ocean. Furthermore, only a handful of models realistically represent the spatial variability of the phase of the diurnal cycle of precipitation. Models tend to correctly simulate the timing of the diurnal maximum of precipitation over ocean during local solar time morning, but fail to acknowledge influence of the land, with the timing of the maximum of precipitation there occurring, unrealistically, at the same time as over ocean. The day-to-day and seasonal variability of the mean precipitation follows observed patterns, but is often unrealistic for the diurnal cycle amplitude. The intraseasonal variability of the amplitude of the diurnal cycle of precipitation is mainly driven by model's ability (or lack of) to produce eastward propagating MJO-like signal. Our results show that many models tend to decrease apparent air-sea contrast in the mean precipitation and diurnal cycle of precipitation patterns over the Maritime Continent. As a result, the complexity of those patterns is heavily smoothed, to such an extent in some models that the Maritime Continent features and imprint is almost unrecognizable relative to the eastern Indian Ocean or Western Pacific.

  12. Uranium Biominerals Precipitated by an Environmental Isolate of Serratia under Anaerobic Conditions.

    PubMed

    Newsome, Laura; Morris, Katherine; Lloyd, Jonathan R

    2015-01-01

    Stimulating the microbially-mediated precipitation of uranium biominerals may be used to treat groundwater contamination at nuclear sites. The majority of studies to date have focussed on the reductive precipitation of uranium as U(IV) by U(VI)- and Fe(III)-reducing bacteria such as Geobacter and Shewanella species, although other mechanisms of uranium removal from solution can occur, including the precipitation of uranyl phosphates via bacterial phosphatase activity. Here we present the results of uranium biomineralisation experiments using an isolate of Serratia obtained from a sediment sample representative of the Sellafield nuclear site, UK. When supplied with glycerol phosphate, this Serratia strain was able to precipitate 1 mM of soluble U(VI) as uranyl phosphate minerals from the autunite group, under anaerobic and fermentative conditions. Under phosphate-limited anaerobic conditions and with glycerol as the electron donor, non-growing Serratia cells could precipitate 0.5 mM of uranium supplied as soluble U(VI), via reduction to nano-crystalline U(IV) uraninite. Some evidence for the reduction of solid phase uranyl(VI) phosphate was also observed. This study highlights the potential for Serratia and related species to play a role in the bioremediation of uranium contamination, via a range of different metabolic pathways, dependent on culturing or in situ conditions.

  13. Uranium Biominerals Precipitated by an Environmental Isolate of Serratia under Anaerobic Conditions

    PubMed Central

    Newsome, Laura; Morris, Katherine; Lloyd, Jonathan. R.

    2015-01-01

    Stimulating the microbially-mediated precipitation of uranium biominerals may be used to treat groundwater contamination at nuclear sites. The majority of studies to date have focussed on the reductive precipitation of uranium as U(IV) by U(VI)- and Fe(III)-reducing bacteria such as Geobacter and Shewanella species, although other mechanisms of uranium removal from solution can occur, including the precipitation of uranyl phosphates via bacterial phosphatase activity. Here we present the results of uranium biomineralisation experiments using an isolate of Serratia obtained from a sediment sample representative of the Sellafield nuclear site, UK. When supplied with glycerol phosphate, this Serratia strain was able to precipitate 1 mM of soluble U(VI) as uranyl phosphate minerals from the autunite group, under anaerobic and fermentative conditions. Under phosphate-limited anaerobic conditions and with glycerol as the electron donor, non-growing Serratia cells could precipitate 0.5 mM of uranium supplied as soluble U(VI), via reduction to nano-crystalline U(IV) uraninite. Some evidence for the reduction of solid phase uranyl(VI) phosphate was also observed. This study highlights the potential for Serratia and related species to play a role in the bioremediation of uranium contamination, via a range of different metabolic pathways, dependent on culturing or in situ conditions. PMID:26132209

  14. Inhibition of precipitation of carbonate apatite by trisodium citrate analysed in base of the formation of chemical complexes in growth solution

    NASA Astrophysics Data System (ADS)

    Prywer, Jolanta; Olszynski, Marcin; Mielniczek-Brzóska, Ewa

    2015-11-01

    Effect of trisodium citrate on the precipitation of carbonate apatite is studied. The experimental series are performed in the solution of artificial urine. The investigations are related to infectious urinary stones formation as carbonate apatite is one of the main components of this kind of stones. To mimic a real infection in urinary tract the aqueous ammonia solution was added to the solution of artificial urine. The spectrophotometric results demonstrate that trisodium citrate increases induction time with respect to carbonate apatite formation and decreases the efficiency of carbonate apatite precipitation. The inhibitory effect of trisodium citrate on the precipitation of carbonate apatite is explained in base of chemical speciation analysis. Such an analysis demonstrates that the inhibitory effect is mainly related with the fact that trisodium citrate binds Ca2+ ions and causes the formation of CaCit- and Ca10(PO4)6CO3 complexes. Trisodium citrate binds Ca2+ ions in the range of pH from 6 to 9.5 for which carbonate apatite is favored to be formed.

  15. Prognostic Significance of Circulating Immune Complexes in Cancer Patients

    PubMed Central

    Dass, Tushar Kanti; Ashok, Ashok

    1991-01-01

    Circulating immune complexes (CIC) were estimated in 100 cancer patients and 25 healthy control volunteers by means of the polyethylene glycol (PEG) precipitation test and latex agglutination inhibition (LAI) test. Pathological levels of CIC were found in 47% of the patients by PEG precipitation test and in 59% of the patients by LAI test; both tests were positive in 33% of the patients. Consequently, the use of the two assays resulted in 73% seropositivity for CIC. The PEG precipitation test detects antigen‐antibody complexes formed in the ratio of 2:1 (Ag2Ab), while the LAI test could detect immune complexes formed over an extended range of antigen‐antibody ratio including complexes as small as SS. CIC values were significantly higher by combined assays (P < 0.001) as compared to individual assays (P < 0.01) when compared with the control group. It was found that 75% of post‐operative follow‐up patients became seronegative for CIC in the combined assays, whereas the 25% of post‐operative patients who remained seropositive for CIC showed recurrence within three months after surgery. Immune‐complex deposition was demonstrated on malignant cells in vitro by direct immunofluorescence studies in 73.3% of patients, while 60% of patients revealed complement‐fixing antigen‐antibody complexes. It was found that 20% of patients showing positive immunofluorescence with anti‐C3‐antisera had decreased levels of CIC. Complement‐mediated cytotoxic injury results in reduction of tumor cell mass and subsequent decrease in CIC. Necrotizing and leucocytoclastic vasculitis in the tumor mass was initiated by raised CIC levels in vivo in 71% of patients. Necrosis of malignant tumors was seen in 58% of patients, and hemorrhage in 36% of patients. These changes were considered to be an aftermath of immuno‐complex vasculitis initiated by CIC. PMID:1752784

  16. WRF Improves Downscaled Precipitation During El Niño Events over Complex Terrain in Northern South America: Implications for Deforestation Studies

    NASA Astrophysics Data System (ADS)

    Rendón, A.; Posada, J. A.; Salazar, J. F.; Mejia, J.; Villegas, J.

    2016-12-01

    Precipitation in the complex terrain of the tropical Andes of South America can be strongly reduced during El Niño events, with impacts on numerous societally-relevant services, including hydropower generation, the main electricity source in Colombia. Simulating rainfall patterns and behavior in such areas of complex terrain has remained a challenge for regional climate models. Current data products such as ERA-Interim and other reanalysis and modelling products generally fail to correctly represent processes at scales that are relevant for these processes. Here we assess the added value to ERA-Interim by dynamical downscaling using the WRF regional climate model, including a comparison of different cumulus parameterization schemes. We found that WRF improves the representation of precipitation during the dry season of El Niño (DJF) events using a 1996-2014 observation period. Further, we use these improved capability to simulate an extreme deforestation scenario under El Niño conditions for an area in the central Andes of Colombia, where a big proportion of the country's hydropower is generated. Our results suggest that forests dampen the effects of El Niño on precipitation. In synthesis, our results illustrate the utility of regional modelling to improve data sources, as well as their potential for predicting the local-to-regional effects of global-change-type processes in regions with limited data availability.

  17. Ultrafast time-resolved carotenoid to-bacteriochlorophyll energy transfer in LH2 complexes from photosynthetic bacteria.

    PubMed

    Cong, Hong; Niedzwiedzki, Dariusz M; Gibson, George N; LaFountain, Amy M; Kelsh, Rhiannon M; Gardiner, Alastair T; Cogdell, Richard J; Frank, Harry A

    2008-08-28

    Steady-state and ultrafast time-resolved optical spectroscopic investigations have been carried out at 293 and 10 K on LH2 pigment-protein complexes isolated from three different strains of photosynthetic bacteria: Rhodobacter (Rb.) sphaeroides G1C, Rb. sphaeroides 2.4.1 (anaerobically and aerobically grown), and Rps. acidophila 10050. The LH2 complexes obtained from these strains contain the carotenoids, neurosporene, spheroidene, spheroidenone, and rhodopin glucoside, respectively. These molecules have a systematically increasing number of pi-electron conjugated carbon-carbon double bonds. Steady-state absorption and fluorescence excitation experiments have revealed that the total efficiency of energy transfer from the carotenoids to bacteriochlorophyll is independent of temperature and nearly constant at approximately 90% for the LH2 complexes containing neurosporene, spheroidene, spheroidenone, but drops to approximately 53% for the complex containing rhodopin glucoside. Ultrafast transient absorption spectra in the near-infrared (NIR) region of the purified carotenoids in solution have revealed the energies of the S1 (2(1)Ag-)-->S2 (1(1)Bu+) excited-state transitions which, when subtracted from the energies of the S0 (1(1)Ag-)-->S2 (1(1)Bu+) transitions determined by steady-state absorption measurements, give precise values for the positions of the S1 (2(1)Ag-) states of the carotenoids. Global fitting of the ultrafast spectral and temporal data sets have revealed the dynamics of the pathways of de-excitation of the carotenoid excited states. The pathways include energy transfer to bacteriochlorophyll, population of the so-called S* state of the carotenoids, and formation of carotenoid radical cations (Car*+). The investigation has found that excitation energy transfer to bacteriochlorophyll is partitioned through the S1 (1(1)Ag-), S2 (1(1)Bu+), and S* states of the different carotenoids to varying degrees. This is understood through a consideration of the energies of the states and the spectral profiles of the molecules. A significant finding is that, due to the low S1 (2(1)Ag-) energy of rhodopin glucoside, energy transfer from this state to the bacteriochlorophylls is significantly less probable compared to the other complexes. This work resolves a long-standing question regarding the cause of the precipitous drop in energy transfer efficiency when the extent of pi-electron conjugation of the carotenoid is extended from ten to eleven conjugated carbon-carbon double bonds in LH2 complexes from purple photosynthetic bacteria.

  18. Impacts of aerosols on seasonal precipitation and snowpack in California based on convection-permitting WRF-Chem simulations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wu, Longtao; Gu, Yu; Jiang, Jonathan H.

    Here, a version of the WRF-Chem model with fully coupled aerosol–meteorology–snowpack is employed to investigate the impacts of various aerosol sources on precipitation and snowpack in California. In particular, the impacts of locally emitted anthropogenic and dust aerosols, and aerosols transported from outside California are studied. We differentiate three pathways of aerosol effects: aerosol–radiation interaction (ARI), aerosol–snow interaction (ASI), and aerosol–cloud interaction (ACI). The convection-permitting model simulations show that precipitation, snow water equivalent (SWE), and surface air temperature averaged over the whole domain (34–42° N, 117–124° W, not including ocean points) are reduced when aerosols are included, therefore reducing largemore » biases in these variables due to the absence of aerosol effects in the model. Aerosols affect California water resources through the warming of mountaintops and the reduction of precipitation; however, different aerosol sources play different roles in changing surface temperature, precipitation, and snowpack in California by means of various weights of the three pathways. ARI by all aerosols mainly cools the surface, leading to slightly increased SWE over the mountains. Locally emitted dust aerosols warm the surface of mountaintops through ASI, in which the reduced snow albedo associated with dusty snow leads to more surface absorption of solar radiation and reduced SWE. Transported aerosols and local anthropogenic aerosols play a dominant role in increasing nonprecipitating clouds but reducing precipitation through ACI, leading to reduced SWE and runoff on the Sierra Nevada, as well as the warming of mountaintops associated with decreased SWE and hence lower surface albedo. The average changes in surface temperature from October 2012 to June 2013 are about –0.19 and 0.22 K for the whole domain and over mountaintops, respectively. Overall, the averaged reduction during October to June is about 7 % for precipitation, 3 % for SWE, and 7 % for surface runoff for the whole domain, while the corresponding numbers are 12, 10, and 10 % for the mountaintops. The reduction in SWE is more significant in a dry year, with 9 % for the whole domain and 16 % for the mountaintops. The maximum reduction of ~20 % in precipitation occurs in May and is associated with the maximum aerosol loading, leading to the largest decrease in SWE and surface runoff over that period. It is also found that dust aerosols can cause early snowmelt on the mountaintops and reduced surface runoff after April.« less

  19. Impacts of aerosols on seasonal precipitation and snowpack in California based on convection-permitting WRF-Chem simulations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wu, Longtao; Gu, Yu; Jiang, Jonathan H.

    A version of the WRF-Chem model with fully coupled aerosol–meteorology–snowpack is employed to investigate the impacts of various aerosol sources on precipitation and snowpack in California. In particular, the impacts of locally emitted anthropogenic and dust aerosols, and aerosols transported from outside California are studied. We differentiate three pathways of aerosol effects: aerosol–radiation interaction (ARI), aerosol–snow interaction (ASI), and aerosol–cloud interaction (ACI). The convection-permitting model simulations show that precipitation, snow water equivalent (SWE), and surface air temperature averaged over the whole domain (34–42° N, 117–124° W, not including ocean points) are reduced when aerosols are included, therefore reducing large biasesmore » in these variables due to the absence of aerosol effects in the model. Aerosols affect California water resources through the warming of mountaintops and the reduction of precipitation; however, different aerosol sources play different roles in changing surface temperature, precipitation, and snowpack in California by means of various weights of the three pathways. ARI by all aerosols mainly cools the surface, leading to slightly increased SWE over the mountains. Locally emitted dust aerosols warm the surface of mountaintops through ASI, in which the reduced snow albedo associated with dusty snow leads to more surface absorption of solar radiation and reduced SWE. Transported aerosols and local anthropogenic aerosols play a dominant role in increasing nonprecipitating clouds but reducing precipitation through ACI, leading to reduced SWE and runoff on the Sierra Nevada, as well as the warming of mountaintops associated with decreased SWE and hence lower surface albedo. The average changes in surface temperature from October 2012 to June 2013 are about -0.19 and 0.22 K for the whole domain and over mountaintops, respectively. Overall, the averaged reduction during October to June is about 7% for precipitation, 3% for SWE, and 7% for surface runoff for the whole domain, while the corresponding numbers are 12, 10, and 10% for the mountaintops. The reduction in SWE is more significant in a dry year, with 9% for the whole domain and 16% for the mountaintops. The maximum reduction of -20% in precipitation occurs in May and is associated with the maximum aerosol loading, leading to the largest decrease in SWE and surface runoff over that period. It is also found that dust aerosols can cause early snowmelt on the mountaintops and reduced surface runoff after April.« less

  20. Impacts of aerosols on seasonal precipitation and snowpack in California based on convection-permitting WRF-Chem simulations

    NASA Astrophysics Data System (ADS)

    Wu, Longtao; Gu, Yu; Jiang, Jonathan H.; Su, Hui; Yu, Nanpeng; Zhao, Chun; Qian, Yun; Zhao, Bin; Liou, Kuo-Nan; Choi, Yong-Sang

    2018-04-01

    A version of the WRF-Chem model with fully coupled aerosol-meteorology-snowpack is employed to investigate the impacts of various aerosol sources on precipitation and snowpack in California. In particular, the impacts of locally emitted anthropogenic and dust aerosols, and aerosols transported from outside California are studied. We differentiate three pathways of aerosol effects: aerosol-radiation interaction (ARI), aerosol-snow interaction (ASI), and aerosol-cloud interaction (ACI). The convection-permitting model simulations show that precipitation, snow water equivalent (SWE), and surface air temperature averaged over the whole domain (34-42° N, 117-124° W, not including ocean points) are reduced when aerosols are included, therefore reducing large biases in these variables due to the absence of aerosol effects in the model. Aerosols affect California water resources through the warming of mountaintops and the reduction of precipitation; however, different aerosol sources play different roles in changing surface temperature, precipitation, and snowpack in California by means of various weights of the three pathways. ARI by all aerosols mainly cools the surface, leading to slightly increased SWE over the mountains. Locally emitted dust aerosols warm the surface of mountaintops through ASI, in which the reduced snow albedo associated with dusty snow leads to more surface absorption of solar radiation and reduced SWE. Transported aerosols and local anthropogenic aerosols play a dominant role in increasing nonprecipitating clouds but reducing precipitation through ACI, leading to reduced SWE and runoff on the Sierra Nevada, as well as the warming of mountaintops associated with decreased SWE and hence lower surface albedo. The average changes in surface temperature from October 2012 to June 2013 are about -0.19 and 0.22 K for the whole domain and over mountaintops, respectively. Overall, the averaged reduction during October to June is about 7 % for precipitation, 3 % for SWE, and 7 % for surface runoff for the whole domain, while the corresponding numbers are 12, 10, and 10 % for the mountaintops. The reduction in SWE is more significant in a dry year, with 9 % for the whole domain and 16 % for the mountaintops. The maximum reduction of ˜ 20 % in precipitation occurs in May and is associated with the maximum aerosol loading, leading to the largest decrease in SWE and surface runoff over that period. It is also found that dust aerosols can cause early snowmelt on the mountaintops and reduced surface runoff after April.

  1. Impacts of aerosols on seasonal precipitation and snowpack in California based on convection-permitting WRF-Chem simulations

    DOE PAGES

    Wu, Longtao; Gu, Yu; Jiang, Jonathan H.; ...

    2018-04-23

    Here, a version of the WRF-Chem model with fully coupled aerosol–meteorology–snowpack is employed to investigate the impacts of various aerosol sources on precipitation and snowpack in California. In particular, the impacts of locally emitted anthropogenic and dust aerosols, and aerosols transported from outside California are studied. We differentiate three pathways of aerosol effects: aerosol–radiation interaction (ARI), aerosol–snow interaction (ASI), and aerosol–cloud interaction (ACI). The convection-permitting model simulations show that precipitation, snow water equivalent (SWE), and surface air temperature averaged over the whole domain (34–42° N, 117–124° W, not including ocean points) are reduced when aerosols are included, therefore reducing largemore » biases in these variables due to the absence of aerosol effects in the model. Aerosols affect California water resources through the warming of mountaintops and the reduction of precipitation; however, different aerosol sources play different roles in changing surface temperature, precipitation, and snowpack in California by means of various weights of the three pathways. ARI by all aerosols mainly cools the surface, leading to slightly increased SWE over the mountains. Locally emitted dust aerosols warm the surface of mountaintops through ASI, in which the reduced snow albedo associated with dusty snow leads to more surface absorption of solar radiation and reduced SWE. Transported aerosols and local anthropogenic aerosols play a dominant role in increasing nonprecipitating clouds but reducing precipitation through ACI, leading to reduced SWE and runoff on the Sierra Nevada, as well as the warming of mountaintops associated with decreased SWE and hence lower surface albedo. The average changes in surface temperature from October 2012 to June 2013 are about –0.19 and 0.22 K for the whole domain and over mountaintops, respectively. Overall, the averaged reduction during October to June is about 7 % for precipitation, 3 % for SWE, and 7 % for surface runoff for the whole domain, while the corresponding numbers are 12, 10, and 10 % for the mountaintops. The reduction in SWE is more significant in a dry year, with 9 % for the whole domain and 16 % for the mountaintops. The maximum reduction of ~20 % in precipitation occurs in May and is associated with the maximum aerosol loading, leading to the largest decrease in SWE and surface runoff over that period. It is also found that dust aerosols can cause early snowmelt on the mountaintops and reduced surface runoff after April.« less

  2. Design of Adaptive Policy Pathways under Deep Uncertainties

    NASA Astrophysics Data System (ADS)

    Babovic, Vladan

    2013-04-01

    The design of large-scale engineering and infrastructural systems today is growing in complexity. Designers need to consider sociotechnical uncertainties, intricacies, and processes in the long- term strategic deployment and operations of these systems. In this context, water and spatial management is increasingly challenged not only by climate-associated changes such as sea level rise and increased spatio-temporal variability of precipitation, but also by pressures due to population growth and particularly accelerating rate of urbanisation. Furthermore, high investment costs and long term-nature of water-related infrastructure projects requires long-term planning perspective, sometimes extending over many decades. Adaptation to such changes is not only determined by what is known or anticipated at present, but also by what will be experienced and learned as the future unfolds, as well as by policy responses to social and water events. As a result, a pathway emerges. Instead of responding to 'surprises' and making decisions on ad hoc basis, exploring adaptation pathways into the future provide indispensable support in water management decision-making. In this contribution, a structured approach for designing a dynamic adaptive policy based on the concepts of adaptive policy making and adaptation pathways is introduced. Such an approach provides flexibility which allows change over time in response to how the future unfolds, what is learned about the system, and changes in societal preferences. The introduced flexibility provides means for dealing with complexities of adaptation under deep uncertainties. It enables engineering systems to change in the face of uncertainty to reduce impacts from downside scenarios while capitalizing on upside opportunities. This contribution presents comprehensive framework for development and deployment of adaptive policy pathway framework, and demonstrates its performance under deep uncertainties on a case study related to urban water catchment in Singapore. Ingredients of this approach are: (a) transient scenarios (time series of various uncertain developments such as climate change, economic developments, societal changes), (b) a methodology for exploring many options and sequences of these options across different futures, and (c) a stepwise policy analysis. The strategy is applied on case of flexible deployment of novel, so-called Next Generation Infrastructure, and assessed in context of the proposed. Results of the study show that flexible design alternatives deliver much enhanced performance compared to systems optimized under deterministic forecasts of the future. The work also demonstrates that explicit incorporation of uncertainty and flexibility into decision-making process reduces capital expenditures while allowing decision makers to learn about system evolution throughout the lifetime of the project.

  3. OLYMPEX: A Global Precipitation Mission (GPM) Ground Validation Campaign on the Olympic Peninsula in the Pacific Northwest

    NASA Astrophysics Data System (ADS)

    McMurdie, L. A.; Houze, R.; Lundquist, J. D.; Mass, C.; Petersen, W. A.; Schwaller, M.

    2014-12-01

    The Global Precipitation Measurement (GPM) Mission was successfully launched at 1837 UTC 27 February 2014 with the first space-borne Ku/Ka band Dual Frequency Precipitation Radar and a passive microwave radiometer (channels ranging from 10-183 GHz). The primary objective of the Core satellite is to measure rain and snow globally, determine its 3D structure, and act as the calibration satellite for a constellation of GPM passive microwave satellites. In order to assess how remotely sensed precipitation can be applied to a range of data applications, ground validation (GV) field campaigns are crucial. As such, the Olympic Mountains Experiment (OLYMPEX) is planned for November 2015 - February 2016. The Olympic Peninsula in Washington State is an ideal location to conduct a GV campaign. It is situated within an active mid-latitude winter storm track and receives among the highest annual precipitation amounts in North America. In one compact area, the Olympic peninsula ranges from ocean to coast to land to mountains. It contains a permanent snowfield and numerous associated river basins. This unique venue will enable the field campaign to monitor both upstream precipitation characteristics and processes over the ocean and their modification over complex terrain. The scientific goals of the OLYMPEX field campaign include physical validation of satellite algorithms, precipitation mechanisms in complex terrain, hydrological applications, and modeling studies. In order to address these goals, a wide variety of existing and new observations are planned. These include surface observing networks of meteorological stations, rain and snow gauges, surface microphysical measurements, and snowpack surveys. Several radars will be deployed including the NASA S-Band dual-polarimetric and NASA Dual-Frequency Dual-Polarimetric Doppler radars, the Canadian x-band radar, and other mobile radars. Several instrumented aircraft are likely to participate such as the NASA DC-8 and the University of North Dakota Citation. The aircraft measurements will determine upstream thermodynamic and moisture conditions, sample particle types and sizes, and act as a proxy for the satellite itself. The ground-based measurements will test how well the satellite proxy measurements determine the rain and snow over complex terrain.

  4. A Top-Down Pathway to Secondary Eyewall Formation in Simulated Tropical Cyclones

    NASA Astrophysics Data System (ADS)

    Tyner, Bryce; Zhu, Ping; Zhang, Jun A.; Gopalakrishnan, Sundararaman; Marks, Frank; Tallapragada, Vijay

    2018-01-01

    Idealized and real-case simulations conducted using the Hurricane Weather Research and Forecasting (HWRF) model demonstrate a "top-down" pathway to secondary eyewall formation (SEF) for tropical cyclones (TCs). For the real-case simulations of Hurricane Rita (2005) and Hurricane Edouard (2014), a comparison to observations reveals the timing and overall characteristics of the simulated SEF appear realistic. An important control of the top-down pathway to SEF is the amount and radial-height distribution of hydrometeors at outer radii. Examination into the simulated hydrometeor particle fall speed distribution reveals that the HWRF operational microphysics scheme is not producing the lightest hydrometeors, which are likely present in observed TCs and are most conducive to being advected from the primary eyewall to the outer rainband region of the TC. Triggering of SEF begins with the fallout of hydrometeors at the outer radii from the TC primary eyewall, where penetrative downdrafts resulting from evaporative cooling of precipitation promote the development of local convection. As the convection-induced radial convergence that is initially located in the midtroposphere extends downward into the boundary layer, it results in the eruption of high entropy air out of the boundary layer. This leads to the rapid development of rainband convection and subsequent SEF via a positive feedback among precipitation, convection, and boundary layer processes.

  5. Formation of Hg(II) tetrathiolate complexes with cysteine at neutral pH

    DOE PAGES

    Warner, Thomas; Jalilehvand, Farideh

    2016-01-04

    Mercury(II) ions precipitate from aqueous cysteine (H 2Cys) solutions containing H 2Cys/Hg(II) mole ratio ≥ 2.0 as Hg( S-HCys) 2. In absence of additional cysteine, the precipitate dissolves at pH ~12 with the [Hg( S, N-Cys) 2] 2- complex dominating. With excess cysteine (H 2Cys/Hg(II) mole ratio ≥ 4.0), higher complexes form and the precipitate dissolves at lower pH values. Previously, we found that tetrathiolate [Hg( S-Cys) 4] 6- complexes form at pH = 11.0; in this work we extend the investigation to pH values of physiological interest. We examined two series of Hg(II)-cysteine solutions in which C Hg(II) variedmore » between 8 – 9 mM and 80 – 100 mM, respectively, with H 2Cys/Hg(II) mole ratios from 4 to ~20. The solutions were prepared in the pH range 7.1 – 8.8, at the pH at which the initial Hg( S-HCys) 2 precipitate dissolved. The variations in the Hg(II) speciation were followed by 199Hg NMR, X-ray absorption and Raman spectroscopic techniques. Our results show that in the dilute solutions (C Hg(II) = 8 – 9 mM), mixtures of di-, tri- (major) and tetrathiolate complexes exist at moderate cysteine excess (C H2Cys ~ 0.16 M) at pH 7.1. In the more concentrated solutions (C Hg(II) = 80 – 100 mM) with high cysteine excess (C H2Cys > 0.9 M), tetrathiolate [Hg( S-cysteinate) 4] m-6 ( m = 0 – 4) complexes dominate in the pH range 7.3 – 7.8, with lower charge than for the [Hg( S-Cys) 4] 6- complex due to protonation of some ( m) of the amino groups of the coordinated cysteine ligands. In conclusion, the results of this investigation could provide a key to the mechanism of biosorption and accumulation of Hg(II) ions in biological / environmental systems.« less

  6. Synergistic effects of the components of global change: Increased vegetation dynamics in open, forest-steppe grasslands driven by wildfires and year-to-year precipitation differences

    PubMed Central

    Aszalós, Réka; Lengyel, Attila

    2017-01-01

    Climate change and land use change are two major elements of human-induced global environmental change. In temperate grasslands and woodlands, increasing frequency of extreme weather events like droughts and increasing severity of wildfires has altered the structure and dynamics of vegetation. In this paper, we studied the impact of wildfires and the year-to-year differences in precipitation on species composition changes in semi-arid grasslands of a forest-steppe complex ecosystem which has been partially disturbed by wildfires. Particularly, we investigated both how long-term compositional dissimilarity changes and species richness are affected by year-to-year precipitation differences on burnt and unburnt areas. Study sites were located in central Hungary, in protected areas characterized by partially-burnt, juniper-poplar forest-steppe complexes of high biodiversity. Data were used from two long-term monitoring sites in the Kiskunság National Park, both characterized by the same habitat complex. We investigated the variation in species composition as a function of time using distance decay methodology. In each sampling area, compositional dissimilarity increased with the time elapsed between the sampling events, and species richness differences increased with increasing precipitation differences between consecutive years. We found that both the long-term compositional dissimilarity, and the year-to-year changes in species richness were higher in the burnt areas than in the unburnt ones. The long-term compositional dissimilarities were mostly caused by perennial species, while the year-to-year changes of species richness were driven by annual and biennial species. As the effect of the year-to-year variation in precipitation was more pronounced in the burnt areas, we conclude that canopy removal by wildfires and extreme inter-annual variability of precipitation, two components of global environmental change, act in a synergistic way. They enhance the effect of one another, resulting in greater long-term and year-to-year changes in the composition of grasslands. PMID:29149208

  7. Synergistic effects of the components of global change: Increased vegetation dynamics in open, forest-steppe grasslands driven by wildfires and year-to-year precipitation differences.

    PubMed

    Kertész, Miklós; Aszalós, Réka; Lengyel, Attila; Ónodi, Gábor

    2017-01-01

    Climate change and land use change are two major elements of human-induced global environmental change. In temperate grasslands and woodlands, increasing frequency of extreme weather events like droughts and increasing severity of wildfires has altered the structure and dynamics of vegetation. In this paper, we studied the impact of wildfires and the year-to-year differences in precipitation on species composition changes in semi-arid grasslands of a forest-steppe complex ecosystem which has been partially disturbed by wildfires. Particularly, we investigated both how long-term compositional dissimilarity changes and species richness are affected by year-to-year precipitation differences on burnt and unburnt areas. Study sites were located in central Hungary, in protected areas characterized by partially-burnt, juniper-poplar forest-steppe complexes of high biodiversity. Data were used from two long-term monitoring sites in the Kiskunság National Park, both characterized by the same habitat complex. We investigated the variation in species composition as a function of time using distance decay methodology. In each sampling area, compositional dissimilarity increased with the time elapsed between the sampling events, and species richness differences increased with increasing precipitation differences between consecutive years. We found that both the long-term compositional dissimilarity, and the year-to-year changes in species richness were higher in the burnt areas than in the unburnt ones. The long-term compositional dissimilarities were mostly caused by perennial species, while the year-to-year changes of species richness were driven by annual and biennial species. As the effect of the year-to-year variation in precipitation was more pronounced in the burnt areas, we conclude that canopy removal by wildfires and extreme inter-annual variability of precipitation, two components of global environmental change, act in a synergistic way. They enhance the effect of one another, resulting in greater long-term and year-to-year changes in the composition of grasslands.

  8. Patterns of precipitation and soil moisture extremes in Texas, US: A complex network analysis

    NASA Astrophysics Data System (ADS)

    Sun, Alexander Y.; Xia, Youlong; Caldwell, Todd G.; Hao, Zengchao

    2018-02-01

    Understanding of the spatial and temporal dynamics of extreme precipitation not only improves prediction skills, but also helps to prioritize hazard mitigation efforts. This study seeks to enhance the understanding of spatiotemporal covariation patterns embedded in precipitation (P) and soil moisture (SM) by using an event-based, complex-network-theoretic approach. Events concurrences are quantified using a nonparametric event synchronization measure, and spatial patterns of hydroclimate variables are analyzed by using several network measures and a community detection algorithm. SM-P coupling is examined using a directional event coincidence analysis measure that takes the order of event occurrences into account. The complex network approach is demonstrated for Texas, US, a region possessing a rich set of hydroclimate features and is frequented by catastrophic flooding. Gridded daily observed P data and simulated SM data are used to create complex networks of P and SM extremes. The uncovered high degree centrality regions and community structures are qualitatively in agreement with the overall existing knowledge of hydroclimate extremes in the study region. Our analyses provide new visual insights on the propagation, connectivity, and synchronicity of P extremes, as well as the SM-P coupling, in this flood-prone region, and can be readily used as a basis for event-driven predictive analytics for other regions.

  9. A study of the influence of soil moisture on future precipitation

    NASA Technical Reports Server (NTRS)

    Fennessy, M. J.; Sud, Y. C.

    1983-01-01

    Forty years of precipitation and surface temperature data observed over 261 Local Climatic Data (LCD) stations in the Continental United States was utilized in a ground hydrology model to yield soil moisture time series at each station. A month-by-month soil moisture dataset was constructed for each year. The monthly precipitation was correlated with antecedent monthly precipitation, soil moisture and vapotranspiration separately. The maximum positive correlation is found to be in the drought prone western Great Plains region during the latter part of summer. There is also some negative correlation in coastal regions. The correlations between soil moisture and precipitation particularly in the latter part of summer, suggest that large scale droughts over extended periods may be partially maintained by the feedback influence of soil moisture on rainfall. In many other regions the lack of positive correlation shows that there is no simple answer such as higher land-surface evapotranspiration leads to more precipitation, and points out the complexity of the influence of soil moisture on the ensuring precipitation.

  10. Nanoscale precipitation in a maraging steel studied by APFIM.

    PubMed

    Stiller, Krystyna; Hättestrand, Mats

    2004-06-01

    This article summarizes findings from our previous investigations and recent studies concerning precipitation in a maraging steel of type 13Cr-9Ni-2Mo-2Cu (at.%) with small additions of Ti (1 at.%) and Al (0.7 at.%). The material was investigated after aging at 475 degrees C up to 400 h using both conventional and three-dimensional atom-probe analyses. The process of phase decomposition in the steel proved to be complicated. It consisted of precipitation of several phases with different chemistry. A Cu-rich phase was first to precipitate and Mo was last in the precipitation sequence. The influence of the complex precipitation path on the material properties is discussed. The investigation clearly demonstrated the usefulness of the applied techniques for investigation of nanoscale precipitation. It is also shown that, complementary methods (such as TEM and EFTEM) giving structural and chemical information on a larger scale must be applied to explain the good properties of the steel after prolonged aging.

  11. Spatial Extent of Charge Repulsion Regulates Assembly Pathways for Lysozyme Amyloid Fibrils

    PubMed Central

    Hill, Shannon E.; Miti, Tatiana; Richmond, Tyson; Muschol, Martin

    2011-01-01

    Formation of large protein fibrils with a characteristic cross β-sheet architecture is the key indicator for a wide variety of systemic and neurodegenerative amyloid diseases. Recent experiments have strongly implicated oligomeric intermediates, transiently formed during fibril assembly, as critical contributors to cellular toxicity in amyloid diseases. At the same time, amyloid fibril assembly can proceed along different assembly pathways that might or might not involve such oligomeric intermediates. Elucidating the mechanisms that determine whether fibril formation proceeds along non-oligomeric or oligomeric pathways, therefore, is important not just for understanding amyloid fibril assembly at the molecular level but also for developing new targets for intervening with fibril formation. We have investigated fibril formation by hen egg white lysozyme, an enzyme for which human variants underlie non-neuropathic amyloidosis. Using a combination of static and dynamic light scattering, atomic force microscopy and circular dichroism, we find that amyloidogenic lysozyme monomers switch between three different assembly pathways: from monomeric to oligomeric fibril assembly and, eventually, disordered precipitation as the ionic strength of the solution increases. Fibril assembly only occurred under conditions of net repulsion among the amyloidogenic monomers while net attraction caused precipitation. The transition from monomeric to oligomeric fibril assembly, in turn, occurred as salt-mediated charge screening reduced repulsion among individual charged residues on the same monomer. We suggest a model of amyloid fibril formation in which repulsive charge interactions are a prerequisite for ordered fibril assembly. Furthermore, the spatial extent of non-specific charge screening selects between monomeric and oligomeric assembly pathways by affecting which subset of denatured states can form suitable intermolecular bonds and by altering the energetic and entropic requirements for the initial intermediates emerging along the monomeric vs. oligomeric assembly path. PMID:21483680

  12. Imaging hydrological processes in headwater riparian seeps with time-lapse electrical resistivity

    USDA-ARS?s Scientific Manuscript database

    The activation of subsurface seepage in response to precipitation events represents a potentially important pathway of nitrogen (N) delivery to streams in agricultural catchments. We used electrical resistivity imaging (ERI) and shallow piezometers to elucidate how seep and non-seep areas within the...

  13. Methods for estimating litter decomposition. Chapter 8

    Treesearch

    Noah J. Karberg; Neal A. Scott; Christian P. Giardina

    2008-01-01

    Litterfall in terrestrial ecosystems represents the primary pathway for nutrient return to soil. Heterotrophic metabolism, facilitated through comminution by small insects and leaching during precipitation events, results in the release of plant litter carbon as CO2 into the atmosphere. The balance between litter inputs and heterotrophic litter...

  14. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Catalano, Jeffrey G.; Giammar, Daniel E.; Wang, Zheming

    Phosphate addition is an in situ remediation approach that may enhance the sequestration of uranium without requiring sustained reducing conditions. However, the geochemical factors that determine the dominant immobilization mechanisms upon phosphate addition are insufficiently understood to design efficient remediation strategies or accurately predict U(VI) transport. The overall objective of our project is to determine the dominant mechanisms of U(VI)-phosphate reactions in subsurface environments. Our research approach seeks to determine the U(VI)-phosphate solid that form in the presence of different groundwater cations, characterize the effects of phosphate on U(VI) adsorption and precipitation on smectite and iron oxide minerals, examples ofmore » two major reactive mineral phases in contaminated sediments, and investigate how phosphate affects U(VI) speciation and fate during water flow through sediments from contaminated sites. The research activities conducted for this project have generated a series of major findings. U(VI) phosphate solids from the autunite mineral family are the sole phases to form during precipitation, with uranyl orthophosphate not occurring despite its predicted greater stability. Calcium phosphates may take up substantial quantities of U(VI) through three different removal processes (adsorption, coprecipitation, and precipitation) but the dominance of each process varies with the pathway of reaction. Phosphate co-adsorbs with U(VI) onto smectite mineral surfaces, forming a mixed uranium-phosphate surface complex over a wide range of conditions. However, this molecular-scale association of uranium and phosphate has not effect on the overall extent of uptake. In contrast, phosphate enhanced U(VI) adsorption to iron oxide minerals at acidic pH conditions but suppresses such adsorption at neutral and alkaline pH, despite forming mixed uranium-phosphate surface complexes during adsorption. Nucleation barriers exist that inhibit U(VI) phosphate solids from precipitating in the presence of smectite and iron oxide minerals as well as sediments from contaminated sites. Phosphate addition enhances retention of U(VI) by sediments from the Rifle, CO and Hanford, WA field research sites, areas containing substantial uranium contamination of groundwater. This enhanced retention is through adsorption processes. Both fast and slow uptake and release behavior is observed, indicating that diffusion of uranium between sediment grains has a substantial effect of U(VI) fate in flowing groundwater systems. This project has revealed the complexity of U(VI)-phosphate reactions in subsurface systems. Distinct chemical processes occur in acidic and alkaline groundwater systems. For the latter, calcium phosphate formation, solution complexation, and competition between phosphate and uranium for adsorption sites may serve to either enhance or inhibit U(VI) removal from groundwater. Under the groundwater conditions present at many contaminated sites in the U.S., phosphate appears to general enhance U(VI) retention and limit transport. However, formation of low-solubility uranium phosphate solids does not occur under field-relevant conditions, despite this being the desired product of phosphate-based remediation approaches. In addition, simple equilibrium approaches fail to well-predict uranium fate in contaminated sediments amended with phosphate, with reactive transport models that include reaction rates and mass transport through occluded domains needed to properly describe the system. Phosphate addition faces challenges to being effective as a stand-alone groundwater treatment approach but would prove beneficial as an add-on to other treatment methods that will further limit uranium migration in the subsurface.« less

  15. Electrostatic Interactions in the Binding Pathway of a Transient Protein Complex Studied by NMR and Isothermal Titration Calorimetry*

    PubMed Central

    Meneses, Erick; Mittermaier, Anthony

    2014-01-01

    Much of our knowledge of protein binding pathways is derived from extremely stable complexes that interact very tightly, with lifetimes of hours to days. Much less is known about weaker interactions and transient complexes because these are challenging to characterize experimentally. Nevertheless, these types of interactions are ubiquitous in living systems. The combination of NMR relaxation dispersion Carr–Purcell–Meiboom–Gill (CPMG) experiments and isothermal titration calorimetry allows the quantification of rapid binding kinetics for complexes with submillisecond lifetimes that are difficult to study using conventional techniques. We have used this approach to investigate the binding pathway of the Src homology 3 (SH3) domain from the Fyn tyrosine kinase, which forms complexes with peptide targets whose lifetimes are on the order of about a millisecond. Long range electrostatic interactions have been shown to play a critical role in the binding pathways of tightly binding complexes. The role of electrostatics in the binding pathways of transient complexes is less well understood. Similarly to previously studied tight complexes, we find that SH3 domain association rates are enhanced by long range electrostatics, whereas short range interactions are formed late in the docking process. However, the extent of electrostatic association rate enhancement is several orders of magnitudes less, whereas the electrostatic-free basal association rate is significantly greater. Thus, the SH3 domain is far less reliant on electrostatic enhancement to achieve rapid association kinetics than are previously studied systems. This suggests that there may be overall differences in the role played by electrostatics in the binding pathways of extremely stable versus transient complexes. PMID:25122758

  16. Environmental influences on the occurrences of sepiolite and palygorskite: a brief review

    USGS Publications Warehouse

    Jones, Blair F.; Conko, Kathryn M.

    2011-01-01

    Sepiolite is a hydrous magnesium silicate formed by precipitation of near-surface brackish or saline waters, under semi-arid climatic conditions. Four major influences on the distribution of sepiolite are source materials, climate, physical parameters and associated phase relations. Two major pathways governing the occurrence of sepiolite and palygorskite are direct precipitation from solution, and the transformation of precursor phases by dissolution–precipitation. Sepiolite is most commonly found as a result of the former process, whereas palygorskite is often characterized as a product of the latter. Thus, sepiolite typically occurs in lacustrine, often saline, strata, while palygorskite is commonly found in conjunction with soils, alluvium, or most abundantly, calcretes. Here, we review briefly some examples of sepiolite deposits in Spain, Turkey, Argentina, USA, and the African countries of Kenya, Morocco, Tunisia, Senegal, Somalia and South Africa.

  17. Rainfall Across the Globe: Precipitation. The Role of Landmass in Monsoon Development. The Relationship Between Precipitation and Sea Surface Temperature on Decadal Time Scales

    NASA Technical Reports Server (NTRS)

    Chao, Winston; Schubert, Siegfried; Suarez, Max; Pegion, Philip

    2000-01-01

    The numerical simulation of precipitation helps scientists understand the complex mechanisms that determine how and why rainfall is distributed across the globe. Simulation aids in the development of forecastin,g efforts that inform policies regarding the management of water resources. Precipitation modeling also provides short-term warnings, for emergencies such as flash floods and mudslides. Just as precipitation modeling can warn of an impending abundance of rainfall, it can help anticipate the absence of rainfall in drought. What constitutes a drought? A meteorological drought simply means that an area is getting a significantly lower amount of rain than usual over a prolonged period of time and an agricultural drought is based on the level of soil moisture.

  18. Removal of antimony (Sb(V)) from Sb mine drainage: biological sulfate reduction and sulfide oxidation-precipitation.

    PubMed

    Wang, Huawei; Chen, Fulong; Mu, Shuyong; Zhang, Daoyong; Pan, Xiangliang; Lee, Duu-Jong; Chang, Jo-Shu

    2013-10-01

    Antimony (Sb(V)) in Sb mine drainage has adverse effects on the receiving water environments. This study for the first time demonstrated the feasibility of using sulfate-reducing bacteria (SRB) to convert sulfate ions in SMD into sulfides that reduce Sb(V) to Sb(III) and to form complex with Sb(III) as precipitate. The principal compound in the precipitate was stibnite (Sb2S3) at pH 7 and pH 9. The Sb(V) removal mechanism is sulfate-reduction and sulfide oxidization-precipitation, different from the conventional SRB-precipitation processes for heavy metals. The Sb(V)/sulfate ratio is noted an essential parameter affecting the Sb removal efficiency from SMD. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. Controlling the strontium-doping in calcium phosphate microcapsules through yeast-regulated biomimetic mineralization.

    PubMed

    Huang, Miaojun; Li, Tianjie; Pan, Ting; Zhao, Naru; Yao, Yongchang; Zhai, Zhichen; Zhou, Jiaan; Du, Chang; Wang, Yingjun

    2016-10-01

    Yeast cells have controllable biosorption on metallic ions during metabolism. However, few studies were dedicated to using yeast-regulated biomimetic mineralization process to control the strontium-doped positions in calcium phosphate microcapsules. In this study, the yeast cells were allowed to pre-adsorb strontium ions metabolically and then served as sacrificing template for the precipitation and calcination of mineral shell. The pre-adsorption enabled the microorganism to enrich of strontium ions into the inner part of the microcapsules, which ensured a slow-release profile of the trace element from the microcapsule. The co-culture with human marrow stromal cells showed that gene expressions of alkaline phosphatase and Collagen-I were promoted. The promotion of osteogenic differentiation was further confirmed in the 3D culture of cell-material complexes. The strategy using living microorganism as 'smart doping apparatus' to control incorporation of trace element into calcium phosphate paved a pathway to new functional materials for hard tissue regeneration.

  20. AgMIP Climate Data and Scenarios for Integrated Assessment. Chapter 3

    NASA Technical Reports Server (NTRS)

    Ruane, Alexander C.; Winter, Jonathan M.; McDermid, Sonali P.; Hudson, Nicholas I.

    2015-01-01

    Climate change presents a great challenge to the agricultural sector as changes in precipitation, temperature, humidity, and circulation patterns alter the climatic conditions upon which many agricultural systems rely. Projections of future climate conditions are inherently uncertain owing to a lack of clarity on how society will develop, policies that may be implemented to reduce greenhouse-gas (GHG) emissions, and complexities in modeling the atmosphere, ocean, land, cryosphere, and biosphere components of the climate system. Global climate models (GCMs) are based on well-established physics of each climate component that enable the models to project climate responses to changing GHG concentration scenarios (Stocker et al., 2013).The most recent iteration of the Coupled Model Intercomparison Project (CMIP5; Taylor et al., 2012) utilized representative concentration pathways (RCPs) to cover the range of plausible GHG concentrations out past the year 2100, with RCP8.5 representing an extreme scenario and RCP4.5 representing a lower concentrations scenario (Moss et al., 2010).

  1. Performance study of magnesium-sulfur battery using a graphene based sulfur composite cathode electrode and a non-nucleophilic Mg electrolyte.

    PubMed

    Vinayan, B P; Zhao-Karger, Zhirong; Diemant, Thomas; Chakravadhanula, Venkata Sai Kiran; Schwarzburger, Nele I; Cambaz, Musa Ali; Behm, R Jürgen; Kübel, Christian; Fichtner, Maximilian

    2016-02-14

    Here we report for the first time the development of a Mg rechargeable battery using a graphene-sulfur nanocomposite as the cathode, a Mg-carbon composite as the anode and a non-nucleophilic Mg based complex in tetraglyme solvent as the electrolyte. The graphene-sulfur nanocomposites are prepared through a new pathway by the combination of thermal and chemical precipitation methods. The Mg/S cell delivers a higher reversible capacity (448 mA h g(-1)), a longer cyclability (236 mA h g(-1) at the end of the 50(th) cycle) and a better rate capability than previously described cells. The dissolution of Mg polysulfides to the anode side was studied by X-ray photoelectron spectroscopy. The use of a graphene-sulfur composite cathode electrode, with the properties of a high surface area, a porous morphology, a very good electronic conductivity and the presence of oxygen functional groups, along with a non-nucleophilic Mg electrolyte gives an improved battery performance.

  2. Migration history of air-breathing fishes reveals Neogene atmospheric circulation patterns

    NASA Astrophysics Data System (ADS)

    Böhme, M.

    2004-05-01

    The migration history of an air-breathing fish group (Channidae; snakehead fishes) is used for reconstructing Neogene Eurasian precipitation and atmospheric circulation patterns. The study shows that snakeheads are sensitive indicators of summer precipitation maxima in subtropical and temperate regions, and are present regularly if the wettest month exceeds 150 mm precipitation and 20 °C mean temperature. The analysis of 515 fossil freshwater fish deposits of the past 50 m.y. from Africa and Eurasia shows two continental-scale migration events from the snakeheads' center of origin in the south Himalayan region, events that can be related to changes in the Northern Hemisphere circulation pattern. The first migration, ca. 17.5 Ma, into western and central Eurasia may have been caused by a northward shift of the Intertropical Convergence Zone that brought western Eurasia under the influence of trade winds that produced a zonal and meridional precipitation gradient in Europe. During the second migration, between 8 and 4 Ma, into Africa and East Asia, snakeheads reached their present-day distribution. This migration could have been related to the intensification of the Asian monsoon that brought summer precipitation to their migratory pathways in East Africa Arabia and East Asia.

  3. Reactive solute transport in streams: A surface complexation approach for trace metal sorption

    USGS Publications Warehouse

    Runkel, Robert L.; Kimball, Briant A.; McKnight, Diane M.; Bencala, Kenneth E.

    1999-01-01

    A model for trace metals that considers in-stream transport, metal oxide precipitation-dissolution, and pH-dependent sorption is presented. Linkage between a surface complexation submodel and the stream transport equations provides a framework for modeling sorption onto static and/or dynamic surfaces. A static surface (e.g., an iron- oxide-coated streambed) is defined as a surface with a temporally constant solid concentration. Limited contact between solutes in the water column and the static surface is considered using a pseudokinetic approach. A dynamic surface (e.g., freshly precipitated metal oxides) has a temporally variable solid concentration and is in equilibrium with the water column. Transport and deposition of solute mass sorbed to the dynamic surface is represented in the stream transport equations that include precipitate settling. The model is applied to a pH-modification experiment in an acid mine drainage stream. Dissolved copper concentrations were depressed for a 3 hour period in response to the experimentally elevated pH. After passage of the pH front, copper was desorbed, and dissolved concentrations returned to ambient levels. Copper sorption is modeled by considering sorption to aged hydrous ferric oxide (HFO) on the streambed (static surface) and freshly precipitated HFO in the water column (dynamic surface). Comparison of parameter estimates with reported values suggests that naturally formed iron oxides may be more effective in removing trace metals than synthetic oxides used in laboratory studies. The model's ability to simulate pH, metal oxide precipitation-dissolution, and pH-dependent sorption provides a means of evaluating the complex interactions between trace metal chemistry and hydrologic transport at the field scale.

  4. Spatio-temporal precipitation climatology over complex terrain using a censored additive regression model.

    PubMed

    Stauffer, Reto; Mayr, Georg J; Messner, Jakob W; Umlauf, Nikolaus; Zeileis, Achim

    2017-06-15

    Flexible spatio-temporal models are widely used to create reliable and accurate estimates for precipitation climatologies. Most models are based on square root transformed monthly or annual means, where a normal distribution seems to be appropriate. This assumption becomes invalid on a daily time scale as the observations involve large fractions of zero observations and are limited to non-negative values. We develop a novel spatio-temporal model to estimate the full climatological distribution of precipitation on a daily time scale over complex terrain using a left-censored normal distribution. The results demonstrate that the new method is able to account for the non-normal distribution and the large fraction of zero observations. The new climatology provides the full climatological distribution on a very high spatial and temporal resolution, and is competitive with, or even outperforms existing methods, even for arbitrary locations.

  5. Study on the mechanism of copper-ammonia complex decomposition in struvite formation process and enhanced ammonia and copper removal.

    PubMed

    Peng, Cong; Chai, Liyuan; Tang, Chongjian; Min, Xiaobo; Song, Yuxia; Duan, Chengshan; Yu, Cheng

    2017-01-01

    Heavy metals and ammonia are difficult to remove from wastewater, as they easily combine into refractory complexes. The struvite formation method (SFM) was applied for the complex decomposition and simultaneous removal of heavy metal and ammonia. The results indicated that ammonia deprivation by SFM was the key factor leading to the decomposition of the copper-ammonia complex ion. Ammonia was separated from solution as crystalline struvite, and the copper mainly co-precipitated as copper hydroxide together with struvite. Hydrogen bonding and electrostatic attraction were considered to be the main surface interactions between struvite and copper hydroxide. Hydrogen bonding was concluded to be the key factor leading to the co-precipitation. In addition, incorporation of copper ions into the struvite crystal also occurred during the treatment process. Copyright © 2016. Published by Elsevier B.V.

  6. Mapping extreme rainfall in the Northwest Portugal region: statistical analysis and spatial modelling

    NASA Astrophysics Data System (ADS)

    Santos, Monica; Fragoso, Marcelo

    2010-05-01

    Extreme precipitation events are one of the causes of natural hazards, such as floods and landslides, making its investigation so important, and this research aims to contribute to the study of the extreme rainfall patterns in a Portuguese mountainous area. The study area is centred on the Arcos de Valdevez county, located in the northwest region of Portugal, the rainiest of the country, with more than 3000 mm of annual rainfall at the Peneda-Gerês mountain system. This work focus on two main subjects related with the precipitation variability on the study area. First, a statistical analysis of several precipitation parameters is carried out, using daily data from 17 rain-gauges with a complete record for the 1960-1995 period. This approach aims to evaluate the main spatial contrasts regarding different aspects of the rainfall regime, described by ten parameters and indices of precipitation extremes (e.g. mean annual precipitation, the annual frequency of precipitation days, wet spells durations, maximum daily precipitation, maximum of precipitation in 30 days, number of days with rainfall exceeding 100 mm and estimated maximum daily rainfall for a return period of 100 years). The results show that the highest precipitation amounts (from annual to daily scales) and the higher frequency of very abundant rainfall events occur in the Serra da Peneda and Gerês mountains, opposing to the valleys of the Lima, Minho and Vez rivers, with lower precipitation amounts and less frequent heavy storms. The second purpose of this work is to find a method of mapping extreme rainfall in this mountainous region, investigating the complex influence of the relief (e.g. elevation, topography) on the precipitation patterns, as well others geographical variables (e.g. distance from coast, latitude), applying tested geo-statistical techniques (Goovaerts, 2000; Diodato, 2005). Models of linear regression were applied to evaluate the influence of different geographical variables (altitude, latitude, distance from sea and distance to the highest orographic barrier) on the rainfall behaviours described by the studied variables. The techniques of spatial interpolation evaluated include univariate and multivariate methods: cokriging, kriging, IDW (inverse distance weighted) and multiple linear regression. Validation procedures were used, assessing the estimated errors in the analysis of descriptive statistics of the models. Multiple linear regression models produced satisfactory results in relation to 70% of the rainfall parameters, suggested by lower average percentage of error. However, the results also demonstrates that there is no an unique and ideal model, depending on the rainfall parameter in consideration. Probably, the unsatisfactory results obtained in relation to some rainfall parameters was motivated by constraints as the spatial complexity of the precipitation patterns, as well as to the deficient spatial coverage of the territory by the rain-gauges network. References Diodato, N. (2005). The influence of topographic co-variables on the spatial variability of precipitation over small regions of complex terrain. Internacional Journal of Climatology, 25(3), 351-363. Goovaerts, P. (2000). Geostatistical approaches for incorporating elevation into the spatial interpolation of rainfall. Journal of Hydrology, 228, 113 - 129.

  7. Rainfall-Runoff Dynamics Following Wildfire in Mountainous Headwater Catchments, Alberta, Canada.

    NASA Astrophysics Data System (ADS)

    Williams, C.; Silins, U.; Bladon, K. D.; Martens, A. M.; Wagner, M. J.; Anderson, A.

    2015-12-01

    Severe wildfire has been shown to increase the magnitude and advance the timing of rainfall-generated stormflows across a range of hydro-climate regions. Loss of canopy and forest floor interception results in increased net precipitation which, along with the removal of forest organic layers and increased shorter-term water repellency, can result in strongly increased surface flow pathways and efficient routing of precipitation to streams. These abrupt changes have the potential to exacerbate flood impacts and alter the timing of runoff delivery to streams. However, while these effects are well documented in drier temperate mountain regions, changes in post-fire rainfall-runoff processes are less well understood in colder, more northern, snowfall dominated regimes. The objectives of this study are to explore longer term precipitation and runoff dynamics of burned and unburned (reference) watersheds from the Southern Rockies Watershed Project (SRWP) after the 2003 Lost Creek wildfire in the front-range Rocky Mountains of southwestern Alberta, Canada. Streamflow and precipitation were measured in 5 watersheds (3.7 - 10.4 km2) for 10 years following the wildfire (2005-2014). Measurements were collected from a dense network of meteorological and hydrometric stations. Stormflow volume, peak flow, time to peak flow, and total annual streamflow were compared between burned and reference streams. Event-based data were separated into 3 post-fire periods to detect changes in rainfall-runoff dynamics as vegetation regenerated. Despite large increases in post-fire snowpacks and net summer rainfall, rainfall-generated runoff from fire-affected watersheds was not large in comparison to that reported from more temperate snowfall-dominated Rocky Mountain hydrologic settings. High proportions of groundwater contribution to annual runoff regimes (as opposed to surface flow pathways) and groundwater storage were likely contributors to greater watershed resistance to wildfire effects in these northern Rocky Mountain catchments.

  8. Modelling hydrological responses of Nerbioi River Basin to Climate Change

    NASA Astrophysics Data System (ADS)

    Mendizabal, Maddalen; Moncho, Roberto; Chust, Guillem; Torp, Peter

    2010-05-01

    Future climate change will affect aquatic systems on various pathways. Regarding the hydrological cycle, which is a very important pathway, changes in hydrometeorological variables (air temperature, precipitation, evapotranspiration) in first order impact discharges. The fourth report assessment of the Intergovernmental Panel for Climate Change indicates there is evidence that the recent warming of the climate system would result in more frequent extreme precipitation events, increased winter flood likelihoods, increased and widespread melting of snow and ice, longer and more widespread droughts, and rising sea level. Available research and climate model outputs indicate a range of hydrological impacts with likely to very likely probabilities (67 to 99%). For example, it is likely that up to 20% of the world population will live in areas where river flood potential could increase by the 2080s. In Spain, within the Atlantic basin, the hydrological variability will increase in the future due to the intensification of the positive phase of the North Atlantic Oscillation (NAO) index. This might cause flood frequency decreases, but its magnitude does not decrease. The generation of flood, its duration and magnitude are closely linked to changes in winter precipitation. The climatic conditions and relief of the Iberian Peninsula favour the generation of floods. In Spain, floods had historically strong socio-economic impacts, with more than 1525 victims in the past five decades. This upward trend of hydrological variability is expected to remain in the coming decades (medium uncertainty) when the intensification of the positive phase of the NAO index (MMA, 2006) is considered. In order to adapt or minimize climate change impacts in water resources, it is necessary to use climate projections as well as hydrological modelling tools. The main objective of this paper is to evaluate and assess the hydrological response to climate changes in flow conditions in Nerbioi river basin (Basque Country, North of Spain). So that adaptation strategies can be defined. In order to fulfil this objective four subobjectives are defined: (1)selection of the future climate projections for the case study area from a wide spectrum of possibilities; (2) model the hydrological processes of the basin with a physically distributed complex hydrological model; (3) validation of the hydrological model with observation data; and (4) runoff simulation introducing regional climate model data selected. The analysis of climate models suggests that extreme precipitation in the Basque Country increased by about 10% during the twenty-first century. This increase of extreme precipitations raised discharge and water level in Nerbioi river basin. That is why in the 21st century it is expected that the flood-prone area will expand for precipitation with a return period of 50 years. In this context, it is necessary to define and evaluate different adaptation options which are already in practice or conceivable according to the current scientific knowledge. As well as evaluate the adaptation measures in terms of their ability to lower the vulnerability of water resources to climate change. For example, land use change could be a useful tool to adapt our basin systems. The land use plays an important role on the water balance of a river by varying the proportion of precipitation that runs off and the fraction that is lost by evapotranspiration. Therefore, both climate change and adaptation strategies will have an impact on the hydrodynamic conditions of rivers; particularly the changes in flow conditions will have a severe ecological, economical and social impact. As future work, adaptation measures will introduce in the future runoff simulation in order to evaluate the effectiveness and as a decision-making tool to operational organisations.

  9. A Lamellar Complex of Lecithin and Poly-l-Tyrosine

    PubMed Central

    Giannoni, G.; Padden, F. J.; Roe, R. J.

    1971-01-01

    Complexes of poly-L-tyrosine (PT) with dipalmitoyllecithin, synthetic, (DPL) and with egg lecithin (EL) have been obtained by precipitation from methanol-water solutions. Chemical analysis indicates that both lecithins bind PT up to a limiting ratio of about 4 tyrosine residues/lecithin molecule. DPL-PT complexes have a lamellar structure closely resembling lecithin itself. In fact, DPL and DPL-PT lamellae have very nearly the same thickness as precipitated from methanol-water, although their swelling behavior on resuspension in pure water is different. The complexes crystallize in the form of hexagonal platelets, some monolayers and some with terraced spiral growths, with a thickness of 50-55 A. In X-ray and electron diffraction they yield sharp reflections at 4.14 A which are characteristic of hexagonal packing of phospholipid paraffinic chains. The order-disorder transition temperature of this crystalline lattice, determined by differential scanning calorimetry, is somewhat higher in the complex than in pure DPL. Physical models consistent with these observations are discussed. ImagesFIGURE 1 aFIGURE 1 b PMID:5134208

  10. Superconductor precursor mixtures made by precipitation method

    DOEpatents

    Bunker, Bruce C.; Lamppa, Diana L.; Voigt, James A.

    1989-01-01

    Method and apparatus for preparing highly pure homogeneous precursor powder mixtures for metal oxide superconductive ceramics. The mixes are prepared by instantaneous precipitation from stoichiometric solutions of metal salts such as nitrates at controlled pH's within the 9 to 12 range, by addition of solutions of non-complexing pyrolyzable cations, such as alkyammonium and carbonate ions.

  11. Short-Chain 3-Hydroxyacyl-Coenzyme A Dehydrogenase Associates with a Protein Super-Complex Integrating Multiple Metabolic Pathways

    PubMed Central

    Narayan, Srinivas B.; Master, Stephen R.; Sireci, Anthony N.; Bierl, Charlene; Stanley, Paige E.; Li, Changhong; Stanley, Charles A.; Bennett, Michael J.

    2012-01-01

    Proteins involved in mitochondrial metabolic pathways engage in functionally relevant multi-enzyme complexes. We previously described an interaction between short-chain 3-hydroxyacyl-coenzyme A dehydrogenase (SCHAD) and glutamate dehydrogenase (GDH) explaining the clinical phenotype of hyperinsulinism in SCHAD-deficient patients and adding SCHAD to the list of mitochondrial proteins capable of forming functional, multi-pathway complexes. In this work, we provide evidence of SCHAD's involvement in additional interactions forming tissue-specific metabolic super complexes involving both membrane-associated and matrix-dwelling enzymes and spanning multiple metabolic pathways. As an example, in murine liver, we find SCHAD interaction with aspartate transaminase (AST) and GDH from amino acid metabolic pathways, carbamoyl phosphate synthase I (CPS-1) from ureagenesis, other fatty acid oxidation and ketogenesis enzymes and fructose-bisphosphate aldolase, an extra-mitochondrial enzyme of the glycolytic pathway. Most of the interactions appear to be independent of SCHAD's role in the penultimate step of fatty acid oxidation suggesting an organizational, structural or non-enzymatic role for the SCHAD protein. PMID:22496890

  12. North Atlantic Oscillation influence and weather types associated with winter total and extreme precipitation events in Spain

    NASA Astrophysics Data System (ADS)

    Queralt, S.; Hernández, E.; Barriopedro, D.; Gallego, D.; Ribera, P.; Casanova, C.

    2009-12-01

    An analysis of winter intensity and frequency of precipitation is presented, based on 102 daily precipitation stations over Spain and the Balearic Islands for the 1997-2006 decade. Precipitation stations have been merged in the eight different regions which compose the analyzed area by the use of an EOF analysis. NAO influence on the intensity and frequency of precipitation of each region is described in terms of mean precipitation, mean rain frequency, the number of extreme events, changes in the precipitation distribution and the prevalent synoptic configuration. Results indicate a non-stationary response; NAO signal being more evident in mid-late winter. Strong regional differences in the response to NAO are also found, which vary according to the specific character of the precipitation under analysis. Thus, NAO exerts a clear effect on the intensity of total and extreme precipitation rates in northern and westernmost Spanish regions, whereas the frequency of precipitation is clearly affected by NAO in central and southwestern areas. While the correlation between NAO and precipitation is negative for most of the analyzed area, two regions reveal positive responses to NAO in total precipitation occurrence and intensity for specific months. Further analyses reveal asymmetric responses to opposite phases of NAO in the precipitation distributions of some regions. The complex regional relationship between NAO and precipitation is also revealed through the modulation of the former in the preferred Circulation Weather Types associated to precipitation in each region. This spatially non-homogeneous NAO signal stresses the need of caution when employing Iberian precipitation as a proxy for NAO.

  13. Changes in the structural composition and reactivity of Acer rubrum leaf litter tannins exposed to warming and altered precipitation: climatic stress-induced tannins are more reactive.

    PubMed

    Tharayil, Nishanth; Suseela, Vidya; Triebwasser, Daniella J; Preston, Caroline M; Gerard, Patrick D; Dukes, Jeffrey S

    2011-07-01

    • Climate change could increase the frequency with which plants experience abiotic stresses, leading to changes in their metabolic pathways. These stresses may induce the production of compounds that are structurally and biologically different from constitutive compounds. • We studied how warming and altered precipitation affected the composition, structure, and biological reactivity of leaf litter tannins in Acer rubrum at the Boston-Area Climate Experiment, in Massachusetts, USA. • Warmer and drier climatic conditions led to higher concentrations of protective compounds, including flavonoids and cutin. The abundance and structure of leaf tannins also responded consistently to climatic treatments. Drought and warming in combination doubled the concentration of total tannins, which reached 30% of leaf-litter DW. This treatment also produced condensed tannins with lower polymerization and a greater proportion of procyanidin units, which in turn reduced sequestration of tannins by litter fiber. Furthermore, because of the structural flexibility of these tannins, litter from this treatment exhibited five times more enzyme (β-glucosidase) complexation capacity on a per-weight basis. Warmer and wetter conditions decreased the amount of foliar condensed tannins. • Our finding that warming and drought result in the production of highly reactive tannins is novel, and highly relevant to climate change research as these tannins, by immobilizing microbial enzymes, could slow litter decomposition and thus carbon and nutrient cycling in a warmer, drier world. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

  14. Vertical structure and microphysical characteristics of precipitation on the high terrain and lee side of the Olympic Mountains

    NASA Astrophysics Data System (ADS)

    Zagrodnik, J. P.; McMurdie, L. A.; Houze, R.

    2017-12-01

    As mid-latitude cyclones pass over coastal mountain ranges, the processes producing their clouds and precipitation are modified when they encounter complex terrain, leading to a maximum in precipitation fallout on the windward slopes and a minimum on the lee side. The precipitation that does reach the high terrain and lee side of a mountain range can be theoretically determined by a complex interaction between the dynamics of air lifting over the terrain, the thermodynamics of moist air, and the microphysical time required to grow particles large enough to fall out. To date, there have been few observational studies that have focused on the nonlinear microphysical processes contributing to the variability of precipitation that is received on the lee side slopes of a mountain range such as the Olympic Mountains. The 2015-16 Olympic Mountains Experiment (OLYMPEX) collected unprecedented observations on the high terrain and lee side of the Olympic Mountains including frequent soundings on Vancouver Island, dual-polarization Doppler radar, multi-frequency airborne radar, and ground-based particle size and crystal habit observations at the higher elevation Hurricane Ridge site. We utilize these observations to examine the evolution of the vertical structure and microphysical precipitation characteristics over the high terrain and leeside within the context of large-scale dynamic and thermodynamic conditions that evolve during the passage of cold season mid-latitude cyclones. The primary goal is to determine the degree to which the observed variability in lee side precipitation amount and microphysical properties are controlled by variations in temperature, flow speed and direction, shear, and stability associated with characteristic synoptic storm sectors and frontal passages.

  15. Thermodynamic and dynamic contributions to future changes in summer precipitation over Northeast Asia and Korea: a multi-RCM study

    NASA Astrophysics Data System (ADS)

    Lee, Donghyun; Min, Seung-Ki; Jin, Jonghun; Lee, Ji-Woo; Cha, Dong-Hyun; Suh, Myoung-Seok; Ahn, Joong-Bae; Hong, Song-You; Kang, Hyun-Suk; Joh, Minsu

    2017-12-01

    This study examines future changes in precipitation over Northeast Asia and Korea using five regional climate model (RCM) simulations driven by single global climate model (GCM) under two representative concentration pathway (RCP) emission scenarios. Focusing on summer season (June-July-August) when heavy rains dominate in this region, future changes in precipitation and associated variables including temperature, moisture, and winds are analyzed by comparing future conditions (2071-2100) with a present climate (1981-2005). Physical mechanisms are examined by analyzing moisture flux convergence at 850 hPa level, which is found to have a close relationship to precipitation and by assessing contribution of thermodynamic effect (TH, moisture increase due to warming) and dynamic effect (DY, atmospheric circulation change) to changes in the moisture flux convergence. Overall background warming and moistening are projected over the Northeast Asia with a good inter-RCM agreement, indicating dominant influence of the driving GCM. Also, RCMs consistently project increases in the frequency of heavy rains and the intensification of extreme precipitation over South Korea. Analysis of moisture flux convergence reveals competing impacts between TH and DY. The TH effect contributes to the overall increases in mean precipitation over Northeast Asia and in extreme precipitation over South Korea, irrespective of models and scenarios. However, DY effect is found to induce local-scale precipitation decreases over the central part of the Korean Peninsula with large inter-RCM and inter-scenario differences. Composite analysis of daily anomaly synoptic patterns indicates that extreme precipitation events are mainly associated with the southwest to northeast evolution of large-scale low-pressure system in both present and future climates.

  16. 21st Century Changes in Precipitation Extremes Over the United States: Can Climate Analogues Help or Hinder?

    NASA Astrophysics Data System (ADS)

    Gao, X.; Schlosser, C. A.

    2013-12-01

    Global warming is expected to alter the frequency and/or magnitude of extreme precipitation events. Such changes could have substantial ecological, economic, and sociological consequences. However, climate models in general do not correctly reproduce the frequency and intensity distribution of precipitation, especially at the regional scale. In this study, gridded data from a dense network of surface precipitation gauges and a global atmospheric analysis at a coarser scale are combined to develop a diagnostic framework for the large-scale meteorological conditions (i.e. flow features, moisture supply) that dominate during extreme precipitation. Such diagnostic framework is first evaluated with the late 20th century simulations from an ensemble of climate models participating in the Coupled Model Intercomparison Project Phase 5 (CMIP5), and is found to produce more consistent (and less uncertain) total and interannaul number of extreme days with the observations than the model-based precipitation over the south-central United States and the Western United States examined in this study. The framework is then applied to the CMIP5 multi-model projections for two radiative forcing scenarios (Representative Concentration Pathways 4.5 and 8.5) to assess the potential future changes in the probability of precipitation extremes over the same study regions. We further analyze the accompanying circulation features and their changes that may be responsible for shifts in extreme precipitation in response to changed climate. The results from this study may guide hazardous weather watches and help society develop adaptive strategies for preventing catastrophic losses.

  17. Effects of watershed topography, soils, land use, and climate on baseflow hydrology in humid regions: A review

    EPA Science Inventory

    Baseflow is the portion of streamflow that is sustained between precipitation events, fed to stream channels by delayed (usually subsurface) pathways. Understanding baseflow processes is critical to issues of water quality, supply, and habitat. This review synthesizes the body of...

  18. Complexes of mismatched and complementary DNA with minor groove binders. Structures at nucleotide resolution via an improved hydroxyl radical cleavage methodology

    PubMed Central

    Bialonska, Dobroslawa; Song, Kenneth; Bolton, Philip H.

    2011-01-01

    Tumor cell lines can replicate faster than normal cells and many also have defective DNA repair pathways. This has lead to the investigation of the inhibition of DNA repair proteins as a means of therapeutic intervention. An alternative approach is to hide or mask damaged DNA from the repair systems. We have developed a protocol to investigate the structures of the complexes of damaged DNA with drug like molecules. Nucleotide resolution structural information can be obtained using an improved hydroxyl radical cleavage protocol. The use of a dTn tail increases the length of the smallest fragments of interest and allows efficient co-precipitation of the fragments with poly(A). The use of a fluorescent label, on the 5′ end of the dTn tail, in conjunction with modified cleavage reaction conditions, avoids the lifetime and other problems with 32P labeling. The structures of duplex DNAs containing AC and CC mismatches in the presence and absence of minor groove binders have been investigated as have those of the fully complementary DNA. The results indicate that the structural perturbations of the mismatches are localized, are sequence dependent and that the presence of a mismatch can alter the binding of drug like molecules. PMID:21893212

  19. Polymersomes containing iron sulfide (FeS) as primordial cell model : for the investigation of energy providing redox reactions.

    PubMed

    Alpermann, Theodor; Rüdel, Kristin; Rüger, Ronny; Steiniger, Frank; Nietzsche, Sandor; Filiz, Volkan; Förster, Stephan; Fahr, Alfred; Weigand, Wolfgang

    2011-04-01

    According to Wächtershäuser's "Iron-Sulfur-World" one major requirement for the development of life on the prebiotic Earth is compartmentalization. Vesicles spontaneously formed from amphiphilic components containing a specific set of molecules including sulfide minerals may have lead to the first autotrophic prebiotic units. The iron sulfide minerals may have been formed by geological conversions in the environment of deep-sea volcanos (black smokers), which can be observed even today. Wächtershäuser postulated the evolution of chemical pathways as fundamentals of the origin of life on earth. In contrast to the classical Miller-Urey experiment, depending on external energy sources, the "Iron-Sulfur-World" is based on the catalytic and energy reproducing redox system FeS+H2S-->FeS2+H2. The energy release out of this redox reaction (∆RG°=-38 kJ/mol, pH 0) could be the cause for the subsequent synthesis of complex organic molecules and the precondition for the development of more complex units similar to cells known today. Here we show the possibility for precipitating iron sulfide inside vesicles composed of amphiphilic block-copolymers as a model system for a first prebiotic unit. Our findings could be an indication for a chemoautotrophic FeS based origin of life.

  20. Ranking streamflow model performance based on Information theory metrics

    NASA Astrophysics Data System (ADS)

    Martinez, Gonzalo; Pachepsky, Yakov; Pan, Feng; Wagener, Thorsten; Nicholson, Thomas

    2016-04-01

    The accuracy-based model performance metrics not necessarily reflect the qualitative correspondence between simulated and measured streamflow time series. The objective of this work was to use the information theory-based metrics to see whether they can be used as complementary tool for hydrologic model evaluation and selection. We simulated 10-year streamflow time series in five watersheds located in Texas, North Carolina, Mississippi, and West Virginia. Eight model of different complexity were applied. The information-theory based metrics were obtained after representing the time series as strings of symbols where different symbols corresponded to different quantiles of the probability distribution of streamflow. The symbol alphabet was used. Three metrics were computed for those strings - mean information gain that measures the randomness of the signal, effective measure complexity that characterizes predictability and fluctuation complexity that characterizes the presence of a pattern in the signal. The observed streamflow time series has smaller information content and larger complexity metrics than the precipitation time series. Watersheds served as information filters and and streamflow time series were less random and more complex than the ones of precipitation. This is reflected the fact that the watershed acts as the information filter in the hydrologic conversion process from precipitation to streamflow. The Nash Sutcliffe efficiency metric increased as the complexity of models increased, but in many cases several model had this efficiency values not statistically significant from each other. In such cases, ranking models by the closeness of the information-theory based parameters in simulated and measured streamflow time series can provide an additional criterion for the evaluation of hydrologic model performance.

  1. PROCESS OF RECOVERING URANIUM

    DOEpatents

    Price, T.D.; Jeung, N.M.

    1958-06-17

    An improved precipitation method is described for the recovery of uranium from aqueous solutions. After removal of all but small amounts of Ni or Cu, and after complexing any iron present, the uranium is separated as the peroxide by adding H/sub 2/O/sub 2/. The improvement lies in the fact that the addition of H/sub 2/O/sub 2/ and consequent precipitation are carried out at a temperature below the freezing; point of the solution, so that minute crystals of solvent are present as seed crystals for the precipitation.

  2. Contamination of estuaries from failing septic tank systems: difficulties in scaling up from monitored individual systems to cumulative impact.

    PubMed

    Geary, Phillip; Lucas, Steven

    2018-02-03

    Aquaculture in many coastal estuaries is threatened by diffuse sources of runoff from different land use activities. The poor performance of septic tank systems (STS), as well as runoff from agriculture, may contribute to the movement of contaminants through ground and surface waters to estuaries resulting in oyster contamination, and following their consumption, impacts to human health. In monitoring individual STS in sensitive locations, it is possible to show that nutrients and faecal contaminants are transported through the subsurface in sandy soils off-site with little attenuation. At the catchment scale however, there are always difficulties in discerning direct linkages between failing STS and water contamination due to processes such as effluent dilution, adsorption, precipitation and vegetative uptake. There is often substantial complexity in detecting and tracing effluent pathways from diffuse sources to water bodies in field studies. While source tracking as well as monitoring using tracers may assist in identifying potential pathways from STS to surface waters and estuaries, there are difficulties in scaling up from monitored individual systems to identify their contribution to the cumulative impact which may be apparent at the catchment scale. The processes which may be obvious through monitoring and dominate at the individual scale may be masked and not readily discernible at the catchment scale due to impacts from other land use activities.

  3. Exploring New Pathways in Precipitation Assimilation

    NASA Technical Reports Server (NTRS)

    Hou, Arthur; Zhang, Sara Q.

    2004-01-01

    Precipitation assimilation poses a special challenge in that the forward model for rain in a global forecast system is based on parameterized physics, which can have large systematic errors that must be rectified to use precipitation data effectively within a standard statistical analysis framework. We examine some key issues in precipitation assimilation and describe several exploratory studies in assimilating rainfall and latent heating information in NASA's global data assimilation systems using the forecast model as a weak constraint. We present results from two research activities. The first is the assimilation of surface rainfall data using a time-continuous variational assimilation based on a column model of the full moist physics. The second is the assimilation of convective and stratiform latent heating retrievals from microwave sensors using a variational technique with physical parameters in the moist physics schemes as a control variable. We will show the impact of assimilating these data on analyses and forecasts. Among the lessons learned are (1) that the time-continuous application of moisture/temperature tendency corrections to mitigate model deficiencies offers an effective strategy for assimilating precipitation information, and (2) that the model prognostic variables must be allowed to directly respond to an improved rain and latent heating field within an analysis cycle to reap the full benefit of assimilating precipitation information. of microwave radiances versus retrieval information in raining areas, and initial efforts in developing ensemble techniques such as Kalman filter/smoother for precipitation assimilation. Looking to the future, we discuss new research directions including the assimilation

  4. Projected change in East Asian summer monsoon by dynamic downscaling: Moisture budget analysis

    NASA Astrophysics Data System (ADS)

    Jung, Chun-Yong; Shin, Ho-Jeong; Jang, Chan Joo; Kim, Hyung-Jin

    2015-02-01

    The summer monsoon considerably affects water resource and natural hazards including flood and drought in East Asia, one of the world's most densely populated area. In this study, we investigate future changes in summer precipitation over East Asia induced by global warming through dynamical downscaling with the Weather Research and Forecast model. We have selected a global model from the Coupled Model Intercomparison Project Phase 5 based on an objective evaluation for East Asian summer monsoon and applied its climate change under Representative Concentration Pathway 4.5 scenario to a pseudo global warming method. Unlike the previous studies that focused on a qualitative description of projected precipitation changes over East Asia, this study tried to identify the physical causes of the precipitation changes by analyzing a local moisture budget. Projected changes in precipitation over the eastern foothills area of Tibetan Plateau including Sichuan Basin and Yangtze River displayed a contrasting pattern: a decrease in its northern area and an increase in its southern area. A local moisture budget analysis indicated the precipitation increase over the southern area can be mainly attributed to an increase in horizontal wind convergence and surface evaporation. On the other hand, the precipitation decrease over the northern area can be largely explained by horizontal advection of dry air from the northern continent and by divergent wind flow. Regional changes in future precipitation in East Asia are likely to be attributed to different mechanisms which can be better resolved by regional dynamical downscaling.

  5. Kynurenine Pathway Pathologies: do Nicotinamide and Other Pathway Co-Factors have a Therapeutic Role in Reduction of Symptom Severity, Including Chronic Fatigue Syndrome (CFS) and Fibromyalgia (FM)

    PubMed Central

    Blankfield, Adele

    2013-01-01

    The definition of dual tryptophan pathways has increased the understanding of the mind-body, body-mind dichotomy. The serotonergic pathway highlights the primary (endogenous) psychiatric disorders. The up-regulation of the kynurenine pathway by physical illnesses can cause neuropathic and immunological disorders1 associated with secondary neuropsychiatric symptoms. Tryptophan and nicotinamide deficiencies fall within the protein energy malnutrition (PEM) spectrum. They can arise if the kynurenine pathway is stressed by primary or secondary inflammatory conditions and the consequent imbalance of available catabolic/anabolic substrates may adversely influence convalescent phase efficiency. The replacement of depleted or reduced NAD+ levels and other cofactors can perhaps improve the clinical management of these disorders. Chronic fatigue syndrome (CFS) and fibromyalgia (FM) appear to meet the criteria of a tryptophan-kynurenine pathway disorder with potential neuroimmunological sequelae. Aspects of some of the putative precipitating factors have been previously outlined.2,3 An analysis of the areas of metabolic dysfunction will focus on future directions for research and management. PMID:23922501

  6. Future changes of precipitation characteristics in China

    NASA Astrophysics Data System (ADS)

    Wu, S.; Wu, Y.; Wen, J.

    2017-12-01

    Global warming has the potential to alter the hydrological cycle, with significant impacts on the human society, the environment and ecosystems. This study provides a detailed assessment of potential changes in precipitation characteristics in China using a suite of 12 high-resolution CMIP5 climate models under a medium and a high Representative Concentration Pathways: RCP4.5 and RCP8.5. We examine future changes over the entire distribution of precipitation, and identify any shift in the shape and/or scale of the distribution. In addition, we use extreme-value theory to evaluate the change in probability and magnitude for extreme precipitation events. Overall, China is going to experience an increase in total precipitation (by 8% under RCP4.5 and 12% under RCP8.5). This increase is uneven spatially, with more increase in the west and less increase in the east. Precipitation frequency is projected to increase in the west and decrease in the east. Under RCP4.5, the overall precipitation frequency for the entire China remains largely unchanged (0.08%). However, RCP8.5 projects a more significant decrease in frequency for large part of China, resulting in an overall decrease of 2.08%. Precipitation intensity is likely increase more uniformly, with an overall increase of 11% for RCP4.5 and 19% for RCP8.5. Precipitation increases for all parts of the distribution, but the increase is more for higher quantiles, i.e. strong events. The relative contribution of small quantiles is likely to decrease, whereas contribution from heavy events is likely to increase. Extreme precipitation increase at much higher rates than average precipitation, and high rates of increase are expected for more extreme events. 1-year events are likely to increase by 15%, but 20-year events are going to increase by 21% under RCP4.5, 26% and 40% respectively under RCP8.5. The increase of extreme events is likely to be more spatially uniform.

  7. Scale effects on information theory-based measures applied to streamflow patterns in two rural watersheds

    NASA Astrophysics Data System (ADS)

    Pan, Feng; Pachepsky, Yakov A.; Guber, Andrey K.; McPherson, Brian J.; Hill, Robert L.

    2012-01-01

    SummaryUnderstanding streamflow patterns in space and time is important for improving flood and drought forecasting, water resources management, and predictions of ecological changes. Objectives of this work include (a) to characterize the spatial and temporal patterns of streamflow using information theory-based measures at two thoroughly-monitored agricultural watersheds located in different hydroclimatic zones with similar land use, and (b) to elucidate and quantify temporal and spatial scale effects on those measures. We selected two USDA experimental watersheds to serve as case study examples, including the Little River experimental watershed (LREW) in Tifton, Georgia and the Sleepers River experimental watershed (SREW) in North Danville, Vermont. Both watersheds possess several nested sub-watersheds and more than 30 years of continuous data records of precipitation and streamflow. Information content measures (metric entropy and mean information gain) and complexity measures (effective measure complexity and fluctuation complexity) were computed based on the binary encoding of 5-year streamflow and precipitation time series data. We quantified patterns of streamflow using probabilities of joint or sequential appearances of the binary symbol sequences. Results of our analysis illustrate that information content measures of streamflow time series are much smaller than those for precipitation data, and the streamflow data also exhibit higher complexity, suggesting that the watersheds effectively act as filters of the precipitation information that leads to the observed additional complexity in streamflow measures. Correlation coefficients between the information-theory-based measures and time intervals are close to 0.9, demonstrating the significance of temporal scale effects on streamflow patterns. Moderate spatial scale effects on streamflow patterns are observed with absolute values of correlation coefficients between the measures and sub-watershed area varying from 0.2 to 0.6 in the two watersheds. We conclude that temporal effects must be evaluated and accounted for when the information theory-based methods are used for performance evaluation and comparison of hydrological models.

  8. Formation of lactoferrin/sodium caseinate complexes and their adsorption behaviour at the air/water interface.

    PubMed

    Li, Quanyang; Zhao, Zhengtao

    2017-10-01

    This research investigated the complexation behaviour between lactoferrin (Lf) and sodium caseinate (NaCas) before and after heat treatment. The results showed that heating facilitated their interaction and different complexes were formed at different Lf/NaCas ratios. The presence of low concentrations of NaCas resulted in the rapid precipitation of Lf, while no precipitation was observed at the NaCas concentrations higher than Lf/NaCas ratio of 2:1. The formed complexes at the ratio of 2:1 have an average diameter of 194±9.0nm and they exhibited a great capacity in lowering the air/water interfacial tension. Further increase of NaCas concentration to ratios of 1:1 and 1:2 resulted in the formation of smaller complexes with average diameters of 60±2.5nm. The complexes formed at these two ratios showed similar adsorption behaviour at the air/water interface and they exhibited lower capacity in decreasing the interfacial tension than the ratio of 2:1. Copyright © 2017 Elsevier Ltd. All rights reserved.

  9. Tetratricopeptide-motif-mediated interaction of FANCG with recombination proteins XRCC3 and BRCA2.

    PubMed

    Hussain, Shobbir; Wilson, James B; Blom, Eric; Thompson, Larry H; Sung, Patrick; Gordon, Susan M; Kupfer, Gary M; Joenje, Hans; Mathew, Christopher G; Jones, Nigel J

    2006-05-10

    Fanconi anaemia is an inherited chromosomal instability disorder characterised by cellular sensitivity to DNA interstrand crosslinkers, bone-marrow failure and a high risk of cancer. Eleven FA genes have been identified, one of which, FANCD1, is the breast cancer susceptibility gene BRCA2. At least eight FA proteins form a nuclear core complex required for monoubiquitination of FANCD2. The BRCA2/FANCD1 protein is connected to the FA pathway by interactions with the FANCG and FANCD2 proteins, both of which co-localise with the RAD51 recombinase, which is regulated by BRCA2. These connections raise the question of whether any of the FANC proteins of the core complex might also participate in other complexes involved in homologous recombination repair. We therefore tested known FA proteins for direct interaction with RAD51 and its paralogs XRCC2 and XRCC3. FANCG was found to interact with XRCC3, and this interaction was disrupted by the FA-G patient derived mutation L71P. FANCG was co-immunoprecipitated with both XRCC3 and BRCA2 from extracts of human and hamster cells. The FANCG-XRCC3 and FANCG-BRCA2 interactions did not require the presence of other FA proteins from the core complex, suggesting that FANCG also participates in a DNA repair complex that is downstream and independent of FANCD2 monoubiquitination. Additionally, XRCC3 and BRCA2 proteins co-precipitate in both human and hamster cells and this interaction requires FANCG. The FANCG protein contains multiple tetratricopeptide repeat motifs (TPRs), which function as scaffolds to mediate protein-protein interactions. Mutation of one or more of these motifs disrupted all of the known interactions of FANCG. We propose that FANCG, in addition to stabilising the FA core complex, may have a role in building multiprotein complexes that facilitate homologous recombination repair.

  10. Cause Resolving of Typhoon Precipitation Using Principle Component Analysis under Complex Interactive Effect of Terrain, Monsoon and Typhoon Vortex

    NASA Astrophysics Data System (ADS)

    Huang, C. L.; Hsu, N. S.

    2015-12-01

    This study develops a novel methodology to resolve the cause of typhoon-induced precipitation using principle component analysis (PCA) and to develop a long lead-time precipitation prediction model. The discovered spatial and temporal features of rainfall are utilized to develop a state-of-the-art descriptive statistical model which can be used to predict long lead-time precipitation during typhoons. The time series of 12-hour precipitation from different types of invasive moving track of typhoons are respectively precede the signal analytical process to qualify the causes of rainfall and to quantify affected degree of each induced cause. The causes include: (1) interaction between typhoon rain band and terrain; (2) co-movement effect induced by typhoon wind field with monsoon; (3) pressure gradient; (4) wind velocity; (5) temperature environment; (6) characteristic distance between typhoon center and surface target station; (7) distance between grade 7 storm radius and surface target station; and (8) relative humidity. The results obtained from PCA can detect the hidden pattern of the eight causes in space and time and can understand the future trends and changes of precipitation. This study applies the developed methodology in Taiwan Island which is constituted by complex diverse terrain formation and height. Results show that: (1) for the typhoon moving toward the direction of 245° to 330°, Causes (1), (2) and (6) are the primary ones to generate rainfall; and (2) for the direction of 330° to 380°, Causes (1), (4) and (6) are the primary ones. Besides, the developed precipitation prediction model by using PCA with the distributed moving track approach (PCA-DMT) is 32% more accurate by that of PCA without distributed moving track approach, and the former model can effectively achieve long lead-time precipitation prediction with an average predicted error of 13% within average 48 hours of forecasted lead-time.

  11. Characterizing the Trade Space Between Capability and Complexity in Next Generation Cloud and Precipitation Observing Systems Using Markov Chain Monte Carlos Techniques

    NASA Astrophysics Data System (ADS)

    Xu, Z.; Mace, G. G.; Posselt, D. J.

    2017-12-01

    As we begin to contemplate the next generation atmospheric observing systems, it will be critically important that we are able to make informed decisions regarding the trade space between scientific capability and the need to keep complexity and cost within definable limits. To explore this trade space as it pertains to understanding key cloud and precipitation processes, we are developing a Markov Chain Monte Carlo (MCMC) algorithm suite that allows us to arbitrarily define the specifications of candidate observing systems and then explore how the uncertainties in key retrieved geophysical parameters respond to that observing system. MCMC algorithms produce a more complete posterior solution space, and allow for an objective examination of information contained in measurements. In our initial implementation, MCMC experiments are performed to retrieve vertical profiles of cloud and precipitation properties from a spectrum of active and passive measurements collected by aircraft during the ACE Radiation Definition Experiments (RADEX). Focusing on shallow cumulus clouds observed during the Integrated Precipitation and Hydrology EXperiment (IPHEX), observing systems in this study we consider W and Ka-band radar reflectivity, path-integrated attenuation at those frequencies, 31 and 94 GHz brightness temperatures as well as visible and near-infrared reflectance. By varying the sensitivity and uncertainty of these measurements, we quantify the capacity of various combinations of observations to characterize the physical properties of clouds and precipitation.

  12. The role of ocean fluxes and radiative forcings in determining tropical rainfall shifts in RCP8.5 simulations

    NASA Astrophysics Data System (ADS)

    McFarlane, Ashly Ann; Frierson, Dargan M. W.

    2017-08-01

    We use Coupled Model Intercomparison Project global climate models forced with the Representative Concentration Pathway (RCP) 8.5 scenario to attribute tropical precipitation shifts under global warming scenarios and changes in cross-equatorial atmosphere heat transport (c-eq AHT) to changes in ocean and radiative fluxes. We find that the models tend to agree on the sign of c-eq AHT and change in precipitation asymmetry induced by each forcing, but not the magnitude. The ice-albedo feedback and aerosol emission reduction lead to the Northern Hemisphere warming, but this is countered by a reduction to the Atlantic Meridional Overturning Circulation northward heat transport and increased longwave leading to the multimodel mean change in precipitation asymmetry being approximately zero. None of the forcings considered, including aerosol cleanup, can account for more than 20% of the multimodel mean change in c-eq AHT alone.

  13. Preventing iron(ii) precipitation in aqueous systems using polyacrylic acid: some molecular insights.

    PubMed

    Artola, Pierre-Arnaud; Rousseau, Bernard; Clavaguéra, Carine; Roy, Marion; You, Dominique; Plancque, Gabriel

    2018-06-22

    We present molecular dynamics simulations of aqueous iron(ii) systems in the presence of polyacrylic acid (PAA) under the extreme conditions that take place in the secondary coolant circuit of a nuclear power plant. The aim of this work is to understand how the oligomer can prevent iron(ii) deposits, and to provide molecular interpretation. We show how, to this end, not only the complexant ability is necessary, but also the chain length compared to iron(ii) concentration. When the chain is long enough, a hyper-complexation phenomenon occurs that can explain the specific capacity of the polymer to prevent iron(ii) precipitation.

  14. Effect of phosphate on U(VI) sorption to montmorillonite: Ternary complexation and precipitation barriers

    NASA Astrophysics Data System (ADS)

    Troyer, Lyndsay D.; Maillot, Fabien; Wang, Zheming; Wang, Zimeng; Mehta, Vrajesh S.; Giammar, Daniel E.; Catalano, Jeffrey G.

    2016-02-01

    Phosphate addition is a potential treatment method to lower the solubility of U(VI) in soil and groundwater systems by causing U(VI) phosphate precipitation as well as enhancing adsorption. Previous work has shown that iron oxide surfaces may facilitate the nucleation of U(VI) phosphate minerals and, that under weakly acidic conditions, phosphate also enhances U(VI) adsorption to such phases. Like iron oxides, clays are important reactive phases in the subsurface but little is known about the interaction of U(VI) and phosphate with these minerals. The effect of aqueous phosphate on U(VI) binding to Wyoming montmorillonite (SWy-2) in air-equilibrated systems was investigated. Equilibrium U(VI) uptake to montmorillonite was determined at pH 4, 6 and 8 at discrete initial phosphate concentrations between 0 and 100 μM. The observed behavior of U(VI) indicates a transition from adsorption to precipitation with increasing total uranium and phosphate concentrations at all pH values. At the highest phosphate concentration examined at each pH value, a barrier to U(VI) phosphate nucleation is observed. At lower concentrations, phosphate has no effect on macroscopic U(VI) adsorption. To assess the mechanisms of U(VI)-phosphate interactions on smectite surfaces, U(VI) speciation was investigated under selected conditions using laser-induced fluorescence spectroscopy (LIFS) and extended X-ray absorption fine-structure (EXAFS) spectroscopy. Samples above the precipitation threshold display EXAFS and LIFS spectral signatures consistent with the autunite family of U(VI) phosphate minerals. However, at lower U(VI) concentrations, changes in LIFS spectra upon phosphate addition suggest that U(VI)-phosphate ternary surface complexes form on the montmorillonite surface at pH 4 and 6 despite the lack of a macroscopic effect on adsorption. The speciation of solid-associated U(VI) below the precipitation threshold at pH 8 is dominated by U(VI)-carbonate surface complexes. This work reveals that ternary complexation may occur without a macroscopic signature, which is attributed to phosphate not appreciably binding to smectite in the absence of U(VI), with U(VI) surface complexes serving as the sole reactive surface sites for phosphate. This study shows that phosphate does not enhance U(VI) adsorption to smectite clay minerals, unlike oxide phases, and that a barrier to homogeneous nucleation of U(VI) phosphates was not affected by the presence of the smectite surface.

  15. Predominance Diagrams, a Useful Tool for the Correlation of the Precipitation-Solubility Equilibrium with Other Ionic Equilibria

    ERIC Educational Resources Information Center

    Pereira, Constantino Fernandez; Alcalde, Manuel; Villegas, Rosario; Vale, Jose

    2007-01-01

    The four types of ionic equilibria--acid-base, redox, precipitation, and complexation--have certain similarities, which has led some authors to develop a unified treatment of them. These authors have highlighted the common aspects and tried to find a systemization of the equilibria that would facilitate learning them. In this unified treatment,…

  16. The sensitivity of precipitation simulations to the soot aerosol presence

    NASA Astrophysics Data System (ADS)

    Palamarchuk, Iuliia; Ivanov, Sergiy; Mahura, Alexander; Ruban, Igor

    2016-04-01

    The role of aerosols in nonlinear feedbacks on atmospheric processes is in a focus of many researches. Particularly, the importance of black carbon particles for evolution of physical weather including precipitation formation and release is investigated by numerical modelling as well as observation networks. However, certain discrepancies between results obtained by different methods are remained. The increasing of complexity in numerical weather modelling systems leads to enlarging a volume of output data and promises to reveal new aspects in complexity of interactions and feedbacks. The Harmonie-38h1.2 model with the AROME physical package is used to study changes in precipitation life-cycle under black carbon polluted conditions. A model configuration includes a radar data assimilation procedure on a high resolution domain covering the Scandinavia region. Model results show that precipitation rate and distribution as well as other variables of atmospheric dynamics and physics over the domain are sensitive to aerosol concentrations. The attention should also be paid to numerical aspects, such as a list of observation types involved in assimilation. The use of high resolution radar information allows to include mesoscale features in initial conditions and to decrease the growth rate of a model error with the lead time.

  17. Effects of Tantalum on the Temporal Evolution of a Model Ni-Al-Cr Superalloy During Phase Decomposition

    NASA Technical Reports Server (NTRS)

    Booth, Morrison, Christopher; Seidman, David N.; Noebe, Ronald D.

    2009-01-01

    The effects of a 2.0 at.% addition of Ta to a model Ni-10.0Al-8.5Cr (at.%) superalloy aged at 1073 K are assessed using scanning electron microscopy and atom-probe tomography. The gamma'(Ll2)-precipitate morphology that develops as a result of gamma-(fcc)matrix phase decomposition is found to evolve from a bimodal distribution of spheroidal precipitates, to {001}-faceted cuboids and parallelepipeds aligned along the elastically soft {001}-type directions. The phase compositions and the widths of the gamma'-precipitate/gamma-matrix heterophase interfaces evolve temporally as the Ni-Al-Cr-Ta alloy undergoes quasi-stationary state coarsening after 1 h of aging. Tantalum is observed to partition preferentially to the gamma'-precipitate phase, and suppresses the mobility of Ni in the gamma-matrix sufficiently to cause an accumulation of Ni on the gamma-matrix side of the gamma'/gamma interface. Additionally, computational modeling, employing Thermo-Calc, Dictra and PrecipiCalc, is employed to elucidate the kinetic pathways that lead to phase decomposition in this concentrated Ni-Al-Cr-Ta alloy.

  18. DNA double-strand-break complexity levels and their possible contributions to the probability for error-prone processing and repair pathway choice.

    PubMed

    Schipler, Agnes; Iliakis, George

    2013-09-01

    Although the DNA double-strand break (DSB) is defined as a rupture in the double-stranded DNA molecule that can occur without chemical modification in any of the constituent building blocks, it is recognized that this form is restricted to enzyme-induced DSBs. DSBs generated by physical or chemical agents can include at the break site a spectrum of base alterations (lesions). The nature and number of such chemical alterations define the complexity of the DSB and are considered putative determinants for repair pathway choice and the probability that errors will occur during this processing. As the pathways engaged in DSB processing show distinct and frequently inherent propensities for errors, pathway choice also defines the error-levels cells opt to accept. Here, we present a classification of DSBs on the basis of increasing complexity and discuss how complexity may affect processing, as well as how it may cause lethal or carcinogenic processing errors. By critically analyzing the characteristics of DSB repair pathways, we suggest that all repair pathways can in principle remove lesions clustering at the DSB but are likely to fail when they encounter clusters of DSBs that cause a local form of chromothripsis. In the same framework, we also analyze the rational of DSB repair pathway choice.

  19. Characterization of Uranium Tolerance and Biomineralization Potential of Caulobacter crescentus

    NASA Astrophysics Data System (ADS)

    Park, D.

    2015-12-01

    Due to its high toxicity and mobility, U(VI) poses a major environmental threat to ecosystems. The ubiquitous aerobic bacterium Caulobacter cresecentus is an attractive candidate for U(VI) bioremediation because of its ability to survive in low-nutrient environments (5, 6), tolerate high U concentrations and mineralize U(VI) aerobically through the formation of uranyl phosphate (U-Pi) precipitates. Despite these attractive environmental properties, both a systems level understanding of the adaptive response pathways involved in U tolerance and the environmental conditions affecting the biomineralization process and stability of biogenic U-Pi minerals remain limited. By measuring changes in both mRNA and protein expression during exposure to high U levels, we have identified the core stress response pathways involved in U tolerance. Pathways associated with heat shock, lipospolysaccharide biosynthesis and transport, outer membrane lipoprotein transport and outermembrane assembly were highly induced at both the RNA and protein levels. Correspondingly, removal of integral components of proteolysis pathways including clpA, clpS and degP significantly reduced U tolerance under biomineralization conditions. Surprisingly, in contrast to many other heavy metals, U did not cause oxidative stress or DNA damage. Together, these analyses indicate that U predominately targets the outermembrane and causes mis-folding of both cytoplasmic and extracytoplasmic proteins. Efforts are currently underway to characterize the morphological and structural properties of biogenic U-Pi minerals and the environmental factors that influence their production and stability. Preliminary AFM studies suggest that U-Pi minerals formed under biomineralization conditions appear morphologically distinct from those formed abiotically between U(VI) and inorganic phosphate. Additionally, we observed that biomineralization tolerates a wide pH range (pH 6-9). Our long-range goal is the development of a conceptual model of the role of microbes in U cycling under oxidizing conditions across the DOE complex, and ultimately, provide DOE with the scientific basis to support decisions for the remediation of legacy sites.

  20. How will climate change pathways and mitigation options alter incidence of vector-borne diseases? A framework for leishmaniasis in South and Meso-America

    PubMed Central

    Masante, Dario; Golding, Nicholas; Pigott, David; Day, John C.; Ibañez-Bernal, Sergio; Kolb, Melanie; Jones, Laurence

    2017-01-01

    The enormous global burden of vector-borne diseases disproportionately affects poor people in tropical, developing countries. Changes in vector-borne disease impacts are often linked to human modification of ecosystems as well as climate change. For tropical ecosystems, the health impacts of future environmental and developmental policy depend on how vector-borne disease risks trade off against other ecosystem services across heterogeneous landscapes. By linking future socio-economic and climate change pathways to dynamic land use models, this study is amongst the first to analyse and project impacts of both land use and climate change on continental-scale patterns in vector-borne diseases. Models were developed for cutaneous and visceral leishmaniasis in the Americas—ecologically complex sand fly borne infections linked to tropical forests and diverse wild and domestic mammal hosts. Both diseases were hypothesised to increase with available interface habitat between forest and agricultural or domestic habitats and with mammal biodiversity. However, landscape edge metrics were not important as predictors of leishmaniasis. Models including mammal richness were similar in accuracy and predicted disease extent to models containing only climate and land use predictors. Overall, climatic factors explained 80% and land use factors only 20% of the variance in past disease patterns. Both diseases, but especially cutaneous leishmaniasis, were associated with low seasonality in temperature and precipitation. Since such seasonality increases under future climate change, particularly under strong climate forcing, both diseases were predicted to contract in geographical extent to 2050, with cutaneous leishmaniasis contracting by between 35% and 50%. Whilst visceral leishmaniasis contracted slightly more under strong than weak management for carbon, biodiversity and ecosystem services, future cutaneous leishmaniasis extent was relatively insensitive to future alternative socio-economic pathways. Models parameterised at narrower geographical scales may be more sensitive to land use pattern and project more substantial changes in disease extent under future alternative socio-economic pathways. PMID:29020041

  1. How will climate change pathways and mitigation options alter incidence of vector-borne diseases? A framework for leishmaniasis in South and Meso-America.

    PubMed

    Purse, Bethan V; Masante, Dario; Golding, Nicholas; Pigott, David; Day, John C; Ibañez-Bernal, Sergio; Kolb, Melanie; Jones, Laurence

    2017-01-01

    The enormous global burden of vector-borne diseases disproportionately affects poor people in tropical, developing countries. Changes in vector-borne disease impacts are often linked to human modification of ecosystems as well as climate change. For tropical ecosystems, the health impacts of future environmental and developmental policy depend on how vector-borne disease risks trade off against other ecosystem services across heterogeneous landscapes. By linking future socio-economic and climate change pathways to dynamic land use models, this study is amongst the first to analyse and project impacts of both land use and climate change on continental-scale patterns in vector-borne diseases. Models were developed for cutaneous and visceral leishmaniasis in the Americas-ecologically complex sand fly borne infections linked to tropical forests and diverse wild and domestic mammal hosts. Both diseases were hypothesised to increase with available interface habitat between forest and agricultural or domestic habitats and with mammal biodiversity. However, landscape edge metrics were not important as predictors of leishmaniasis. Models including mammal richness were similar in accuracy and predicted disease extent to models containing only climate and land use predictors. Overall, climatic factors explained 80% and land use factors only 20% of the variance in past disease patterns. Both diseases, but especially cutaneous leishmaniasis, were associated with low seasonality in temperature and precipitation. Since such seasonality increases under future climate change, particularly under strong climate forcing, both diseases were predicted to contract in geographical extent to 2050, with cutaneous leishmaniasis contracting by between 35% and 50%. Whilst visceral leishmaniasis contracted slightly more under strong than weak management for carbon, biodiversity and ecosystem services, future cutaneous leishmaniasis extent was relatively insensitive to future alternative socio-economic pathways. Models parameterised at narrower geographical scales may be more sensitive to land use pattern and project more substantial changes in disease extent under future alternative socio-economic pathways.

  2. Impact of moderate and extreme climate change scenarios on growth, morphological features, photosynthesis, and fruit production of hot pepper.

    PubMed

    Lee, Sang Gyu; Kim, Sung Kyeom; Lee, Hee Ju; Lee, Hee Su; Lee, Jin Hyoung

    2018-01-01

    Horticultural crop production and changes in physiological aspects during the growing season may be affected by climate change factors (CC), which include increased temperature and the associated doubling or tripling of atmospheric CO 2 concentrations. However, the potential effects are complex and many parameters might impact on the observed effects. To evaluate the effects of CC, the growth, yield, fruit characteristics, photosynthetic traits, and morphological characteristics of hot peppers were investigated. The hot peppers were grown under two CC scenarios, with the Representative Concentration Pathway (RCP) of 4.5 (Temp.; +3.4°C, CO 2 conc.; 540 μmol/mol, Precipitation +17.3%) and RCP 8.5 (Temp.; +6.0°C and CO 2 conc.; 940 μmol/mol, Precipitation +20.3%), respectively, using extreme weather simulators. This was compared with existing weather conditions occurring in Jeonju, South Korea in terms of air temperature, relative humidity, radiation, and precipitation. Overall, the plant height showed the highest under moderate CC conditions (RCP 4.5) among all the treatments tested. The number of leaves in the RCP 8.5 condition showed 7,739/plants, which was 2.2 times higher than that of the control. In addition, fruit shape was shortened and percentage dry matter was also the highest. The yield of hot pepper in the CC RCP 4.5 and 8.5 conditions were decreased by 21.5% and 89.2% when compared with that of the control, respectively. The days to harvest in the condition of CC scenarios were shortened from 5 to 13 compared with that of control, predominantly due to the increased air temperature. The results indicated that the severe RCP CC scenarios made reduction in the yields and negative affection on the fruit qualities. Overall, hot pepper was tolerant of mild CC scenarios of temperature × CO 2 but was significantly affected by more extreme CC interacting parameter concentrations (or similar).

  3. Climate projections and extremes in dynamically downscaled CMIP5 model outputs over the Bengal delta: a quartile based bias-correction approach with new gridded data

    NASA Astrophysics Data System (ADS)

    Hasan, M. Alfi; Islam, A. K. M. Saiful; Akanda, Ali Shafqat

    2017-11-01

    In the era of global warning, the insight of future climate and their changing extremes is critical for climate-vulnerable regions of the world. In this study, we have conducted a robust assessment of Regional Climate Model (RCM) results in a monsoon-dominated region within the new Coupled Model Intercomparison Project Phase 5 (CMIP5) and the latest Representative Concentration Pathways (RCP) scenarios. We have applied an advanced bias correction approach to five RCM simulations in order to project future climate and associated extremes over Bangladesh, a critically climate-vulnerable country with a complex monsoon system. We have also generated a new gridded product that performed better in capturing observed climatic extremes than existing products. The bias-correction approach provided a notable improvement in capturing the precipitation extremes as well as mean climate. The majority of projected multi-model RCMs indicate an increase of rainfall, where one model shows contrary results during the 2080s (2071-2100) era. The multi-model mean shows that nighttime temperatures will increase much faster than daytime temperatures and the average annual temperatures are projected to be as hot as present-day summer temperatures. The expected increase of precipitation and temperature over the hilly areas are higher compared to other parts of the country. Overall, the projected extremities of future rainfall are more variable than temperature. According to the majority of the models, the number of the heavy rainy days will increase in future years. The severity of summer-day temperatures will be alarming, especially over hilly regions, where winters are relatively warm. The projected rise of both precipitation and temperature extremes over the intense rainfall-prone northeastern region of the country creates a possibility of devastating flash floods with harmful impacts on agriculture. Moreover, the effect of bias-correction, as presented in probable changes of both bias-corrected and uncorrected extremes, can be considered in future policy making.

  4. Catastrophic precipitation-triggered lahar at Casita volcano, Nicaragua: Occurrence, bulking and transformation

    USGS Publications Warehouse

    Scott, K.M.; Vallance, J.W.; Kerle, N.; Macias, J.L.; Strauch, W.; Devoli, G.

    2005-01-01

    A catastrophic lahar began on 30 October 1998, as hurricane precipitation triggered a small flank collapse of Casita volcano, a complex and probably dormant stratovolcano. The initial rockslide-debris avalanche evolved on the flank to yield a watery debris flood with a sediment concentration less than 60 per cent by volume at the base of the volcano. Within 2-5 km, however, the watery flow entrained (bulked) enough sediment to transform entirely to a debris flow. The debris flow, 6 km downstream and 1??2 km wide and 3 to 6 m deep, killed 2500 people, nearly the entire populations of the communities of El Porvenir and Rolando Rodriguez. These 'new towns' were developed in a prehistoric lahar pathway: at least three flows of similar size since 8330 14C years BP are documented by stratigraphy in the same 30-degree sector. Travel time between perception of the flow and destruction of the towns was only 2??5-3??0 minutes. The evolution of the flow wave occurred with hydraulic continuity and without pause or any extraordinary addition of water. The precipitation trigger of the Casita lahar emphasizes the nee d, in volcano hazard assessments, for including the potential for non-eruption-related collapse lahars with the more predictable potential of their syneruption analogues. The flow behaviour emphasizes that volcano collapses can yield not only volcanic debris avalanches with restricted runouts, but also mobile lahars that enlarge by bulking as they flow. Volumes and hence inundation areas of collapse-runout lahars can increase greatly beyond their sources: the volume of the Casita lahar bulked to at least 2??6 times the contributing volume of the flank collapse and 4??2 times that of the debris flood. At least 78 per cent of the debris flow matrix (sediment < -1??0??; 2 mm) was entrained during flow. Copyright c 2004 John Wiley & Sons, Ltd.

  5. Curcumin-β-cyclodextrin inclusion complex: stability, solubility, characterisation by FT-IR, FT-Raman, X-ray diffraction and photoacoustic spectroscopy, and food application.

    PubMed

    Mangolim, Camila Sampaio; Moriwaki, Cristiane; Nogueira, Ana Claudia; Sato, Francielle; Baesso, Mauro Luciano; Neto, Antônio Medina; Matioli, Graciette

    2014-06-15

    Curcumin was complexed with β-CD using co-precipitation, freeze-drying and solvent evaporation methods. Co-precipitation enabled complex formation, as indicated by the FT-IR and FT-Raman techniques via the shifts in the peaks that were assigned to the aromatic rings of curcumin. In addition, photoacoustic spectroscopy and X-ray diffraction, with the disappearance of the band related to aromatic rings, by Gaussian fitting, and modifications in the spectral lines, respectively, also suggested complex formation. The possible complexation had an efficiency of 74% and increased the solubility of the pure colourant 31-fold. Curcumin-β-CD complex exhibited a sunlight stability 18% higher than the pure colourant. This material was stable to pH variations and storage at -15 and 4°C. With an isothermal heating at 100 and 150°C for 2h, the material exhibited a colour retention of approximately 99%. The application of curcumin-β-CD complex in vanilla ice creams intensified the colour of the products and produced a great sensorial acceptance. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Morphology and formation mechanism in precipitation of calcite induced by Curvibacter lanceolatus strain HJ-1

    NASA Astrophysics Data System (ADS)

    Zhang, Chonghong; Li, Fuchun; Lv, Jiejie

    2017-11-01

    Precipitation of calcium carbobate induced by microbial activities is common occurrence in controlled solution, but the formation mechanism and morphology in precipitation of calcite in solution systems is unclear, and the role of microbes is disputed. Here, culture experiment was performed for 50 days using the Curvibacter lanceolatus strain HJ-1 in a M2 culture medium, and the phase composition and morphology of the precipitates were characterized by the X-ray diffraction (XRD), Fourier transform infrared (FT-IR), and scanning electron microscopy (SEM) techniques. We show that the precipitation processes in our experiment lead to unusual morphologies of crystals corresponding to different growth stages, and the morphologies of the precipitated crystal aggregates ranging from the main rod-, cross-, star-, cauliflower-like morphologies to spherulitic structure. The complex and unusual morphologies of the precipitated calcite by strain HJ-1 may provide a reference point for better understanding the biomineralization mechanism of calcite, moreover, morphological transition of minerals revealed that the multi-ply crystals-aggregation mechanism for calcite growth in crystallisation media.

  7. Semimicrodetermination of combined tantalum and niobium with selenous acid

    USGS Publications Warehouse

    Grimaldi, F.S.; Schnepfe, M.

    1959-01-01

    Tantalum and niobium are separated and determined gravimetrically by precipitation with selenous acid from highly acidic solutions in the absence of complexing agents. Hydrogen peroxide is used in the preparation of the solution and later catalytically destroyed during digestion of the precipitate. From 0.2 to 30 mg., separately or in mixtures, of niobium or tantalum pentoxide can be separated from mixtures containing 100 mg. each of the oxides of scandium, yttrium, cerium, vanadium, molybdenum, iron, aluminum, tin, lead, and bismuth with a single precipitation; and from 30 mg. of titanium dioxide, and 50 mg. each of the oxides of antimony and thorium, when present separately, with three precipitations. At least 50 mg. of uranium(VI) oxide can be separated with a single precipitation when present alone; otherwise, three precipitations may be needed. Zirconium does not interfere when the tantalum and niobium contents of the sample are small, but in general, zirconium as well as tungsten interfere. The method is applied to the determination of the earth acids in tantaloniobate ores.

  8. A hybrid orographic plus statistical model for downscaling daily precipitation in Northern California

    USGS Publications Warehouse

    Pandey, G.R.; Cayan, D.R.; Dettinger, M.D.; Georgakakos, K.P.

    2000-01-01

    A hybrid (physical-statistical) scheme is developed to resolve the finescale distribution of daily precipitation over complex terrain. The scheme generates precipitation by combining information from the upper-air conditions and from sparsely distributed station measurements; thus, it proceeds in two steps. First, an initial estimate of the precipitation is made using a simplified orographic precipitation model. It is a steady-state, multilayer, and two-dimensional model following the concepts of Rhea. The model is driven by the 2.5?? ?? 2.5?? gridded National Oceanic and Atmospheric Administration-National Centers for Environmental Prediction upper-air profiles, and its parameters are tuned using the observed precipitation structure of the region. Precipitation is generated assuming a forced lifting of the air parcels as they cross the mountain barrier following a straight trajectory. Second, the precipitation is adjusted using errors between derived precipitation and observations from nearby sites. The study area covers the northern half of California, including coastal mountains, central valley, and the Sierra Nevada. The model is run for a 5-km rendition of terrain for days of January-March over the period of 1988-95. A jackknife analysis demonstrates the validity of the approach. The spatial and temporal distributions of the simulated precipitation field agree well with the observed precipitation. Further, a mapping of model performance indices (correlation coefficients, model bias, root-mean-square error, and threat scores) from an array of stations from the region indicates that the model performs satisfactorily in resolving daily precipitation at 5-km resolution.

  9. Surface complexation and precipitate geometry for aqueous Zn(II) sorption on ferrihydrite: II. XANES analysis and simulation

    USGS Publications Warehouse

    Waychunas, G.A.; Fuller, C.C.; Davis, J.A.; Rehr, J.J.

    2003-01-01

    X-ray absorption near-edge spectroscopy (XANES) analysis of sorption complexes has the advantages of high sensitivity (10- to 20-fold greater than extended X-ray absorption fine structure [EXAFS] analysis) and relative ease and speed of data collection (because of the short k-space range). It is thus a potentially powerful tool for characterization of environmentally significant surface complexes and precipitates at very low surface coverages. However, quantitative analysis has been limited largely to "fingerprint" comparison with model spectra because of the difficulty of obtaining accurate multiple-scattering amplitudes for small clusters with high confidence. In the present work, calculations of the XANES for 50- to 200-atom clusters of structure from Zn model compounds using the full multiple-scattering code Feff 8.0 accurately replicate experimental spectra and display features characteristic of specific first-neighbor anion coordination geometry and second-neighbor cation geometry and number. Analogous calculations of the XANES for small molecular clusters indicative of precipitation and sorption geometries for aqueous Zn on ferrihydrite, and suggested by EXAFS analysis, are in good agreement with observed spectral trends with sample composition, with Zn-oxygen coordination and with changes in second-neighbor cation coordination as a function of sorption coverage. Empirical analysis of experimental XANES features further verifies the validity of the calculations. The findings agree well with a complete EXAFS analysis previously reported for the same sample set, namely, that octahedrally coordinated aqueous Zn2+ species sorb as a tetrahedral complex on ferrihydrite with varying local geometry depending on sorption density. At significantly higher densities but below those at which Zn hydroxide is expected to precipitate, a mainly octahedral coordinated Zn2+ precipitate is observed. An analysis of the multiple scattering paths contributing to the XANES demonstrates the importance of scattering paths involving the anion sublattice. We also describe the specific advantages of complementary quantitative XANES and EXAFS analysis and estimate limits on the extent of structural information obtainable from XANES analysis. ?? 2003 Elsevier Science Ltd.

  10. An isotopic view of water and nitrate transport through the vadose zone in Oregon's southern Willamette Valley's Groundwater Management Area

    NASA Astrophysics Data System (ADS)

    Brooks, J. R.; Pearlstein, S.; Hutchins, S.; Faulkner, B. R.; Rugh, W.; Willard, K.; Coulombe, R.; Compton, J.

    2017-12-01

    Groundwater nitrate contamination affects thousands of households in Oregon's southern Willamette Valley and many more across the USA. The southern Willamette Valley Groundwater Management Area (GWMA) was established in 2004 due to nitrate levels in the groundwater exceeding the human health standard of 10 mg nitrate-N L-1. Much of the nitrogen (N) inputs to the GWMA comes from agricultural fertilizers, and thus efforts to reduce N inputs to groundwater are focused upon improving N management. However, the effectiveness of these improvements on groundwater quality is unclear because of the complexity of nutrient transport through the vadose zone and long groundwater residence times. Our objective was to focus on vadose zone transport and understand the dynamics and timing of N and water movement below the rooting zone in relation to N management and water inputs. Stable isotopes are a powerful tool for tracking water movement, and understanding N transformations. In partnership with local farmers and state agencies, we established lysimeters and groundwater wells in multiple agricultural fields in the GWMA, and have monitored nitrate, nitrate isotopes, and water isotopes weekly for multiple years. Our results indicate that vadose zone transport is highly complex, and the residence time of water collected in lysimeters was much longer than expected. While input precipitation water isotopes were highly variable over time, lysimeter water isotopes were surprisingly consistent, more closely resembling long-term precipitation isotope means rather than recent precipitation isotopic signatures. However, some particularly large precipitation events with unique isotopic signatures revealed high spatial variability in transport, with some lysimeters showing greater proportions of recent precipitation inputs than others. In one installation where we have groundwater wells and lysimeters at multiple depths, nitrate/nitrite concentrations decreased with depth. N concentrations and δ15N values indicated leaching at 1 m and denitrification at 3 m depth. However, these relationships showed spatial and temporal complexity. We are exploring how these vadose zone complexities can be incorporated into practical understanding of the impacts of N management on groundwater inputs.

  11. Evolution of the phenazine biosynthesis pathway and diversity of phenazine-producing Pseudomonas spp. in dryland wheat-producing areas of Washington state

    USDA-ARS?s Scientific Manuscript database

    Phenazines are versatile secondary metabolites of bacterial origin that function as signaling compounds and contribute to the ecological fitness and pathogenicity of the producing strains. A 2007-2008 survey of commercial dryland fields in central Washington State (annual precipitation <15 in) revea...

  12. Characterization of complex carbide–silicide precipitates in a Ni–Cr–Mo–Fe–Si alloy modified by welding

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bhattacharyya, D., E-mail: dhb@ansto.gov.au; Davis, J.; Drew, M.

    2015-07-15

    Nickel based alloys of the type Hastelloy-N™ are ideal candidate materials for molten salt reactors, as well as for applications such as pressure vessels, due to their excellent resistance to creep, oxidation and corrosion. In this work, the authors have attempted to understand the effects of welding on the morphology, chemistry and crystal structure of the precipitates in the heat affected zone (HAZ) and the weld zone of a Ni–Cr–Mo–Fe–Si alloy similar to Hastelloy-N™ in composition, by using characterization techniques such as scanning and transmission electron microscopy. Two plates of a Ni–Cr–Mo–Fe–Si alloy GH-3535 were welded together using a TiGmore » welding process without filler material to achieve a joint with a curved molten zone with dendritic structure. It is evident that the primary precipitates have melted in the HAZ and re-solidified in a eutectic-like morphology, with a chemistry and crystal structure only slightly different from the pre-existing precipitates, while the surrounding matrix grains remained unmelted, except for the zones immediately adjacent to the precipitates. In the molten zone, the primary precipitates were fully melted and dissolved in the matrix, and there was enrichment of Mo and Si in the dendrite boundaries after solidification, and re-precipitation of the complex carbides/silicides at some grain boundaries and triple points. The nature of the precipitates in the molten zone varied according to the local chemical composition. - Graphical abstract: Display Omitted - Highlights: • Ni-based alloy with Cr, Mo, Si, Fe and C was welded, examined with SEM, EBSD, and TEM. • Original Ni{sub 2}(Mo,Cr){sub 4}(Si,C) carbides changed from equiaxed to lamellar shape in HAZ. • Composition and crystal structure remained almost unchanged in HAZ. • Original carbides changed to lamellar Ni{sub 3}(Mo,Cr){sub 3}(Si,C) in some cases in weld metal. • Precipitates were mostly incoherent, but semi-coherent in some cases in weld metal.« less

  13. Do competitors modulate rare plant response to precipitation change?

    USGS Publications Warehouse

    Levine, J.M.; Kathryn, Mceachern A.; Cowan, C.

    2010-01-01

    Ecologists increasingly suspect that climate change will directly impact species physiology, demography, and phenology, but also indirectly affect these measures via changes to the surrounding community. Unfortunately, few studies examine both the direct and indirect pathways of impact. Doing so is important because altered competitive pressures can reduce or magnify the direct responses of a focal species to climate change. Here, we examine the effects of changing rainfall on three rare annual plant species in the presence and absence of competition on the California Channel Islands. We used rain-out shelters and hand watering to exclude and augment early, late, and season-long rainfall, spanning the wide range of precipitation change forecast for the region. In the absence of competition, droughts reduced the population growth rates of two of three focal annuals, while increased rainfall was only sometimes beneficial, As compared to the focal species, the dominant competitors were more sensitive to the precipitation treatments, benefiting from increased season-long precipitation and harmed by droughts. Importantly, the response of two of three competitors to the precipitation treatments tended to be positively correlated with those of the focal annuals. Although this leads to the expectation that increased competition will counter the direct benefits of favorable conditions, such indirect effects of precipitation change proved weak to nonexistent in our experiment. Competitors had little influence on the precipitation response of two focal species, due to their low sensitivity to competition and highly variable precipitation responses. Competition did affect how our third focal species responded to precipitation change, but this effect only approached significance, and whether it truly resulted from competitor response to precipitation change was unclear. Our work suggests that even when competitors respond to climate change, these responses may have little effect on the focal species. Ultimately, the strength of the indirect effect depends on how strongly climate change alters competition, and how sensitive focal species are to changes in competition. ?? 2010 by the Ecological Society of America.

  14. Dissolution-Driven Permeability Reduction of a Fractured Carbonate Caprock

    PubMed Central

    Ellis, Brian R.; Fitts, Jeffrey P.; Bromhal, Grant S.; McIntyre, Dustin L.; Tappero, Ryan; Peters, Catherine A.

    2013-01-01

    Abstract Geochemical reactions may alter the permeability of leakage pathways in caprocks, which serve a critical role in confining CO2 in geologic carbon sequestration. A caprock specimen from a carbonate formation in the Michigan sedimentary Basin was fractured and studied in a high-pressure core flow experiment. Inflowing brine was saturated with CO2 at 40°C and 10 MPa, resulting in an initial pH of 4.6, and had a calcite saturation index of −0.8. Fracture permeability decreased during the experiment, but subsequent analyses did not reveal calcite precipitation. Instead, experimental observations indicate that calcite dissolution along the fracture pathway led to mobilization of less soluble mineral particles that clogged the flow path. Analyses of core sections via electron microscopy, synchrotron-based X-ray diffraction imaging, and the first application of microbeam Ca K-edge X-ray absorption near edge structure, provided evidence that these occlusions were fragments from the host rock rather than secondary precipitates. X-ray computed tomography showed a significant loss of rock mass within preferential flow paths, suggesting that dissolution also removed critical asperities and caused mechanical closure of the fracture. The decrease in fracture permeability despite a net removal of material along the fracture pathway demonstrates a nonintuitive, inverse relationship between dissolution and permeability evolution in a fractured carbonate caprock. PMID:23633894

  15. High-resolution dynamically downscaled projections of precipitation in the mid and late 21st century over North America: DYNAMICAL DOWNSCALING AT 12 KM

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, Jiali; Kotamarthi, Veerabhadra R.

    This study performs high spatial resolution (12 km) Weather Research and Forecasting (WRF) simulations over a very large domain (7200 × 6180 km2, covering much of North America) to explore changes in mean and extreme precipitation in the mid and late 21st century under Representative Concentration Pathways 4.5 (RCP 4.5) and 8.5 (RCP 8.5). We evaluate WRF model performance for a historical simulation and future projections when applying the Community Climate System Model version 4 (CCSM4) as initial and boundary conditions with and without a bias correction. WRF simulations using boundary and initial conditions from both versions of CCSM4, showmore » smaller biases versus evaluation data sets than does CCSM4 over western North America. WRF simulations also improve spatial details of precipitation over much of North America. However, driving the WRF with the bias corrected CCSM4 does not always reduce the bias. WRF-projected changes in precipitation include decreasing intensity over the U.S. Southwest, increasing intensity over the eastern United Sates and most of Canada, and an increase in the number of days with heavy precipitation over much of NA. Projected precipitation changes are more evident in the late 21st century than the mid 21st century, and they are more evident under RCP 8.5 than RCP 4.5 in the late 21st century. Uncertainties in the projected changes in precipitation due to different warming scenarios are non-negligible. Differences in summer precipitation changes between WRF and CCSM4 are significant over most of the United States.« less

  16. High-resolution dynamically downscaled projections of precipitation in the mid and late 21st century over North America

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    None, None

    This study performs high-spatial-resolution (12 km) Weather Research and Forecasting (WRF) simulations over a very large domain (7200 km × 6180 km, covering much of North America) to explore changes in mean and extreme precipitation in the mid and late 21st century under Representative Concentration Pathways 4.5 (RCP 4.5) and 8.5 (RCP 8.5). We evaluate WRF model performance for a historical simulation and future projections, applying the Community Climate System Model version 4 (CCSM4) as initial and boundary conditions with and without a bias correction. WRF simulations using boundary and initial conditions from both versions of CCSM4 show smaller biasesmore » versus evaluation data sets than does CCSM4 over western North America. WRF simulations also improve spatial details of precipitation over much of North America. However, driving the WRF with the bias-corrected CCSM4 does not always reduce the bias. WRF-projected changes in precipitation include decreasing intensity over the southwestern United States, increasing intensity over the eastern United States and most of Canada, and an increase in the number of days with heavy precipitation over much of North America. Projected precipitation changes are more evident in the late 21st century than the mid 21st century, and they are more evident under RCP 8.5 than under RCP 4.5 in the late 21st century. Uncertainties in the projected changes in precipitation due to different warming scenarios are non-negligible. Differences in summer precipitation changes between WRF and CCSM4 are significant over most of the United States.« less

  17. Exploring the Biotic Pump Hypothesis along Non-linear Transects in Tropical South America

    NASA Astrophysics Data System (ADS)

    Molina, R.; Bettin, D. M.; Salazar, J. F.; Villegas, J. C.

    2014-12-01

    Forests might actively transport atmospheric moisture from the oceans, according to the biotic pump of atmospheric moisture (BiPAM) hypothesis. The BiPAM hypothesis appears to be supported by the fact that precipitation drops exponentially with distance from ocean along non-forested land transects, but not on their forested counterparts. Yet researchers have discussed the difficulty in defining proper transects for BiPAM studies. Previous studies calculate precipitation gradients either along linear transects maximizing distance to the ocean, or along polylines following specific atmospheric pathways (e.g., aerial rivers). In this study we analyzed precipitation gradients along curvilinear streamlines of wind in tropical South America. Wind streamlines were computed using long-term quarterly averages of meridional and zonal wind components from the ERA-Interim and NCEP/NCAR reanalyses. Total precipitation along streamlines was obtained from four data sources: TRMM, UDEL, ERA-Interim, and NCEP/NCAR. Precipitation on land versus distance from the ocean was analyzed along selected streamlines for each data source. As predicted by BiPAM, precipitation gradients did not decrease exponentially along streamlines in the vicinity of the Amazon forest, but dropped rapidly as distance from the forest increased. Remarkably, precipitation along streamlines in some areas outside the Amazon forest did not decrease exponentially either. This was possibly owing to convergence of moisture conveyed by low level jets (LLJs) in those areas (e.g., streamlines driven by the Caribbean and CHOCO jets on the Pacific coast of Colombia). Significantly, BiPAM held true even along long transects displaying strong sinuosity. In fact, the general conclusions of previous studies remain valid. Yet effects of LLJs on precipitation gradients need to be thoroughly considered in future BiPAM studies.

  18. Future changes in regional precipitation simulated by a half-degree coupled climate model: Sensitivity to horizontal resolution

    DOE PAGES

    Shields, Christine A.; Kiehl, Jeffrey T.; Meehl, Gerald A.

    2016-06-02

    The global fully coupled half-degree Community Climate System Model Version 4 (CCSM4) was integrated for a suite of climate change ensemble simulations including five historical runs, five Representative Concentration Pathway 8.5 [RCP8.5) runs, and a long Pre-Industrial control run. This study focuses on precipitation at regional scales and its sensitivity to horizontal resolution. The half-degree historical CCSM4 simulations are compared to observations, where relevant, and to the standard 1° CCSM4. Both the halfdegree and 1° resolutions are coupled to a nominal 1° ocean. North American and South Asian/Indian monsoon regimes are highlighted because these regimes demonstrate improvements due to highermore » resolution, primarily because of better-resolved topography. Agriculturally sensitive areas are analyzed and include Southwest, Central, and Southeast U.S., Southern Europe, and Australia. Both mean and extreme precipitation is discussed for convective and large-scale precipitation processes. Convective precipitation tends to decrease with increasing resolution and large-scale precipitation tends to increase. Improvements for the half-degree agricultural regions can be found for mean and extreme precipitation in the Southeast U.S., Southern Europe, and Australian regions. Climate change responses differ between the model resolutions for the U.S. Southwest/Central regions and are seasonally dependent in the Southeast and Australian regions. Both resolutions project a clear drying signal across Southern Europe due to increased greenhouse warming. As a result, differences between resolutions tied to the representation of convective and large-scale precipitation play an important role in the character of the climate change and depend on regional influences.« less

  19. High-resolution dynamically downscaled projections of precipitation in the mid and late 21st century over North America

    DOE PAGES

    None, None

    2015-07-29

    This study performs high-spatial-resolution (12 km) Weather Research and Forecasting (WRF) simulations over a very large domain (7200 km × 6180 km, covering much of North America) to explore changes in mean and extreme precipitation in the mid and late 21st century under Representative Concentration Pathways 4.5 (RCP 4.5) and 8.5 (RCP 8.5). We evaluate WRF model performance for a historical simulation and future projections, applying the Community Climate System Model version 4 (CCSM4) as initial and boundary conditions with and without a bias correction. WRF simulations using boundary and initial conditions from both versions of CCSM4 show smaller biasesmore » versus evaluation data sets than does CCSM4 over western North America. WRF simulations also improve spatial details of precipitation over much of North America. However, driving the WRF with the bias-corrected CCSM4 does not always reduce the bias. WRF-projected changes in precipitation include decreasing intensity over the southwestern United States, increasing intensity over the eastern United States and most of Canada, and an increase in the number of days with heavy precipitation over much of North America. Projected precipitation changes are more evident in the late 21st century than the mid 21st century, and they are more evident under RCP 8.5 than under RCP 4.5 in the late 21st century. Uncertainties in the projected changes in precipitation due to different warming scenarios are non-negligible. Differences in summer precipitation changes between WRF and CCSM4 are significant over most of the United States.« less

  20. Lowering Low-Density Lipoprotein Particles in Plasma Using Dextran Sulphate Co-Precipitates Procoagulant Extracellular Vesicles.

    PubMed

    Wang, Jiong-Wei; Zhang, Ya-Nan; Sze, Siu Kwan; van de Weg, Sander M; Vernooij, Flora; Schoneveld, Arjan H; Tan, Sock-Hwee; Versteeg, Henri H; Timmers, Leo; Lam, Carolyn S P; de Kleijn, Dominique P V

    2017-12-29

    Plasma extracellular vesicles (EVs) are lipid membrane vesicles involved in several biological processes including coagulation. Both coagulation and lipid metabolism are strongly associated with cardiovascular events. Lowering very-low- and low-density lipoprotein ((V)LDL) particles via dextran sulphate LDL apheresis also removes coagulation proteins. It remains unknown, however, how coagulation proteins are removed in apheresis. We hypothesize that plasma EVs that contain high levels of coagulation proteins are concomitantly removed with (V)LDL particles by dextran sulphate apheresis. For this, we precipitated (V)LDL particles from human plasma with dextran sulphate and analyzed the abundance of coagulation proteins and EVs in the precipitate. Coagulation pathway proteins, as demonstrated by proteomics and a bead-based immunoassay, were over-represented in the (V)LDL precipitate. In this precipitate, both bilayer EVs and monolayer (V)LDL particles were observed by electron microscopy. Separation of EVs from (V)LDL particles using density gradient centrifugation revealed that almost all coagulation proteins were present in the EVs and not in the (V)LDL particles. These EVs also showed a strong procoagulant activity. Our study suggests that dextran sulphate used in LDL apheresis may remove procoagulant EVs concomitantly with (V)LDL particles, leading to a loss of coagulation proteins from the blood.

  1. Emergent Behavior of Arctic Precipitation in Response to Enhanced Arctic Warming

    NASA Astrophysics Data System (ADS)

    Anderson, Bruce T.; Feldl, Nicole; Lintner, Benjamin R.

    2018-03-01

    Amplified warming of the high latitudes in response to human-induced emissions of greenhouse gases has already been observed in the historical record and is a robust feature evident across a hierarchy of model systems, including the models of the Coupled Model Intercomparison Project Phase 5 (CMIP5). The main aims of this analysis are to quantify intermodel differences in the Arctic amplification (AA) of the global warming signal in CMIP5 RCP8.5 (Representative Concentration Pathway 8.5) simulations and to diagnose these differences in the context of the energy and water cycles of the region. This diagnosis reveals an emergent behavior between the energetic and hydrometeorological responses of the Arctic to warming: in particular, enhanced AA and its associated reduction in dry static energy convergence is balanced to first order by latent heating via enhanced precipitation. This balance necessitates increasing Arctic precipitation with increasing AA while at the same time constraining the magnitude of that precipitation increase. The sensitivity of the increase, 1.25 (W/m2)/K ( 240 (km3/yr)/K), is evident across a broad range of historical and projected AA values. Accounting for the energetic constraint on Arctic precipitation, as a function of AA, in turn informs understanding of both the sign and magnitude of hydrologic cycle changes that the Arctic may experience.

  2. New insights on strain energies in hexagonal systems

    NASA Astrophysics Data System (ADS)

    Thuinet, Ludovic; Besson, Rémy

    2012-06-01

    The preferential habit planes of coherent precipitates, strongly influencing alloy properties, can be investigated by direct-space elasticity methods, providing new insight into delicate issues such as elastic inhomogeneities or anharmonicity. Focusing on the poorly known hexagonal system, this work enlightens important trends overlooked hitherto, such as the critical role of C44, leading to the identification of distinct families of hexagonal alloys for precipitation. Moreover, it demonstrates the complex influence of inhomogeneities for real, finite-thickness morphologies. Finally, it provides the missing material required for atomic-scale studies of precipitation in low-symmetry systems with long-range interactions.

  3. Diversity of bile salts in fish and amphibians: evolution of a complex biochemical pathway.

    PubMed

    Hagey, Lee R; Møller, Peter R; Hofmann, Alan F; Krasowski, Matthew D

    2010-01-01

    Bile salts are the major end metabolites of cholesterol and are also important in lipid and protein digestion, as well as shaping of the gut microflora. Previous studies had demonstrated variation of bile salt structures across vertebrate species. We greatly extend prior surveys of bile salt variation in fish and amphibians, particularly in analysis of the biliary bile salts of Agnatha and Chondrichthyes. While there is significant structural variation of bile salts across all fish orders, bile salt profiles are generally stable within orders of fish and do not correlate with differences in diet. This large data set allowed us to infer evolutionary changes in the bile salt synthetic pathway. The hypothesized ancestral bile salt synthetic pathway, likely exemplified in extant hagfish, is simpler and much shorter than the pathway of most teleost fish and terrestrial vertebrates. Thus, the bile salt synthetic pathway has become longer and more complex throughout vertebrate evolution. Analysis of the evolution of bile salt synthetic pathways provides a rich model system for the molecular evolution of a complex biochemical pathway in vertebrates.

  4. Fracture sealing caused by mineral precipitation: The role of aperture and mineral heterogeneity on precipitation-induced permeability loss

    NASA Astrophysics Data System (ADS)

    Jones, T.; Detwiler, R. L.

    2017-12-01

    Fractures act as dominant pathways for fluid flow in low-permeability rocks. However, in many subsurface environments, fluid rock reactions can lead to mineral precipitation, which alters fracture surface geometry and reduces fracture permeability. In natural fractures, surface mineralogy and roughness are often heterogeneous, leading to variations in both velocity and reactive surface area. The combined effects of surface roughness and mineral heterogeneity can lead to large disparities in local precipitation rates that are difficult to predict due to the strong coupling between dissolved mineral transport and reactions at the fracture surface. Recent experimental observations suggest that mineral precipitation in a heterogeneous fracture may promote preferential flow and focus large dissolved ion concentrations into regions with limited reactive surface area. Here, we build on these observations using reactive transport simulations. Reactive transport is simulated with a quasi-steady-state 2D model that uses a depth-averaged mass-transfer relationship to describe dissolved mineral transport across the fracture aperture and local precipitation reactions. Mineral precipitation-induced changes to fracture surface geometry are accounted for using two different approaches: (1) by only allowing reactive minerals to grow vertically, and (2) by allowing three-dimensional mineral growth at reaction sites. Preliminary results from simulations using (1) suggest that precipitation-induced aperture reduction focuses flow into thin flow paths. This flow focusing causes a reduction in the fracture-scale precipitation rate, and precipitation ceases when the reaction zone extends the entire length of the fracture. This approach reproduces experimental observations at early time reasonably well, but as precipitation proceeds, reaction sites can grow laterally along the fracture surfaces, which is not predicted by (1). To account for three-dimensional mineral growth (2), we have incorporated a level-set-method based approach for tracking the mineral interfaces in three dimensions. This provides a mechanistic approach for simulating the dynamics of the formation, and eventual closing, of preferential flow paths by precipitation-induced aperture alteration, that do not occur using (1).

  5. Evaluation of wintertime precipitation forecasts over the Australian Snowy Mountains

    NASA Astrophysics Data System (ADS)

    Huang, Yi; Chubb, Thomas; Sarmadi, Fahimeh; Siems, Steven T.; Manton, Michael J.; Franklin, Charmaine N.; Ebert, Elizabeth

    2018-07-01

    This study evaluates the Australian Community Climate and Earth-System Simulator (ACCESS) Numerical Weather Prediction system in forecasting precipitation across the Australian Snowy Mountains for two cool seasons. Metrics based on seasonal accumulated and daily precipitation show that the model is able to reproduce the observed domain-mean accumulated precipitation reasonably well (with a slight overestimation), but this is, in part, due to a compensation of various errors. Both the frequency and intensity of the heavy precipitation days (domain-mean daily precipitation >5 mm day-1) are overrepresented, particularly over the complex terrain and high-elevation areas, whereas the frequency of the very light precipitation days (domain-mean daily precipitation <1 mm day-1) is underestimated, primarily over lower-elevation areas both upwind and downwind of the mountains. Most of the precipitation is forecasted by the grid-scale precipitation scheme, with appreciable snowfalls predicted over the high elevations. The model also demonstrates appreciable skill in reproducing the synoptic regimes. The proportion of the forecast precipitation for each regime is comparable to the observations, although the orographic enhancement over the western slopes of the mountains is more pronounced in the forecasts, particularly for the wetter regimes. An examination on the effect of the lower-atmosphere stability suggests that most of the precipitation (50-70% over the high elevations) is produced under the "unblocked" condition, which is diagnosed 31% of the time. The remainder is produced under the "blocked" condition. Combined with a case study, potential sources of error associated with the forecast precipitation biases are also discussed.

  6. Comparative Analysis of Argonaute-dependent Small RNA Pathways in Drosophila

    PubMed Central

    Zhou, Rui; Hotta, Ikuko; Denli, Ahmet M.; Hong, Pengyu; Perrimon, Norbert; Hannon, Gregory J.

    2008-01-01

    Summary The specificity of RNAi pathways is determined by several classes of small RNAs, which include siRNAs, piRNAs, endo-siRNAs, and microRNAs (miRNAs). These small RNAs are invariably incorporated into large Argonaute (Ago)-containing effector complexes known as RNA-induced silencing complexes (RISCs), which they guide to silencing targets. Both genetic and biochemical strategies have yielded conserved molecular components of small RNA biogenesis and effector machineries. However, given the complexity of these pathways, there are likely to be additional components and regulators that remain to be uncovered. We have undertaken a comparative and comprehensive RNAi screen to identify genes that impact three major Ago-dependent small RNA pathways that operate in Drosophila S2 cells. We identify subsets of candidates that act positively or negatively in siRNA, endo-siRNA and miRNA pathways. Our studies indicate that many components are shared among all three Argonaute-dependent silencing pathways, though each is also impacted by discrete sets of genes. PMID:19026789

  7. Deep Soil Recharge in Arid and Semi-Arid Regions: New Evidences in MU-US Sandy Land of China

    NASA Astrophysics Data System (ADS)

    Cheng, Y.; Yang, W.; Zhan, H.

    2017-12-01

    Precipitation induced recharge is an important source of groundwater budget but it is very difficult to quantify in arid and semiarid regions. In this study, a newly invented lysimeter was used to monitor deep soil recharge (DSR) under 200 cm depth in MU-US sandy land in western China under three kinds of landforms (mobile dune, semi-fixed dune, and fixed dune). We found that the annual DSRs in such three different kinds of landforms varied significantly. Specifically, the annual DSRs were 224.1 mm (50.5% of the annual precipitation), 71.1 mm (50.5% of the annual precipitation), and 1.3 mm (0.3% of the annual precipitation) in mobile dune, semi-fixed dune, and fixed dune, respectively. We also found that vegetation coverage and precipitation pattern significantly affected DSR. A 24-hr precipitation event with the precipitation amount greater than 8 mm was able to infiltrate soil deeper than 200 cm and contributed to ground water recharge directly. Vegetation was a dominant factor influencing infiltration in the fixed sand dune. Our research revealed that precipitation induced DSR in arid and semi-arid regions was a complex process that required long-term monitoring and innovative system analysis of interrelated factors such as precipitation strength and pattern, meteorological parameters, and dynamic soil moisture. Key words: Precipitation pattern, sand dune groundwater, deep soil recharge, infiltration.

  8. Total C and N Pools and fluxes vary with time, soil temperature, and moisture along an elevation, precipitation, and vegetation gradient in southern Appalachian Forests

    Treesearch

    Jennifer D. Knoepp; Craig R. See; James M. Vose; Chelcy F. Miniat; James S. Clark

    2018-01-01

    The interactions of terrestrial C pools and fluxes with spatial and temporal variation in climate are not well understood. We conducted this study in the southern Appalachian Mountains where complex topography provides variability in temperature, precipitation, and forest communities. In 1990, we established five large plots across an elevation gradient...

  9. Flexible Reactive Berm (FRBerm) for Removal of Heavy Metals from Runoff Water

    DTIC Science & Technology

    2016-03-01

    FRTR) include precipitation and flocculation, treatment with ion exchange resins, and phytoremediation . The costs of these technologies are driven by... phytoremediation (http://www.frtr.gov, accessed 11 November 2015). The costs of these technologies are driven by the size and complexity of the site...precipitation and flocculation, treatment with ion exchange resins, and phytoremediation (http://www.frtr.gov, accessed 11 November 2015). The

  10. IMPROVEMENT UPON THE CARRIER PRECIPITATION OF PLUTONIUM IONS FROM NITRIC ACID SOLUTIONS

    DOEpatents

    James, R.A.; Thompson, S.G.

    1958-12-23

    A process is reported for improving the removal of plutonlum by carrier precipitation by the addition of nitrite ions to a nitrlc acid solutlon of neutronirradiated unanium so as to destroy any hydrazine that may be present in the solution since the hydrazine tends to complex the tetravalent plutonium and prevents removal by the carrier precipltate, such as bismuth phospbate.

  11. Incorporating reaction-rate dependence in reaction-front models of wellbore-cement/carbonated-brine systems

    DOE PAGES

    Iyer, Jaisree; Walsh, Stuart D. C.; Hao, Yue; ...

    2017-03-08

    Contact between wellbore cement and carbonated brine produces reaction zones that alter the cement's chemical composition and its mechanical properties. The reaction zones have profound implications on the ability of wellbore cement to serve as a seal to prevent the flow of carbonated brine. Under certain circumstances, the reactions may cause resealing of leakage pathways within the cement or at cement-interfaces; either due to fracture closure in response to mechanical weakening or due to the precipitation of calcium carbonate within the fracture. In prior work, we showed how mechanical sealing can be simulated using a diffusion-controlled reaction-front model that linksmore » the growth of the cement reaction zones to the mechanical response of the fracture. Here, we describe how such models may be extended to account for the effects of the calcite reaction-rate. We discuss how the relative rates of reaction and diffusion within the cement affect the precipitation of calcium carbonate within narrow leakage pathways, and how such behavior relates to the formation of characteristic reaction modes in the direction of flow. In addition, we compare the relative impact of precipitation and mechanical deformation on fracture sealing for a range of flow conditions and fracture apertures. Here, we conclude by considering how the prior leaching of calcium from cement may influence the sealing behavior of fractures, and the implication of prior leaching on the ability of laboratory tests to predict long-term sealing.« less

  12. The selective phosphorylation of a guanine nucleotide-binding regulatory protein

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carlson, K.E.

    1989-01-01

    Receptor-activated signal transduction pathways regulate the responsiveness of cells to external stimuli. These transduction pathways themselves are subject to regulation, most commonly by phosphorylation. Guanine nucleotide-binding regulatory proteins (G Proteins), as requisite signal transducing elements for many plasma membrane receptors, are considered likely targets for regulation by phosphorylation. Protein kinase C (PKC) has been shown to phosphorylate the {alpha} subunit of G{sub i} and other G proteins in solution. However, the occurrence of the phosphorylation of G{sub 1} within intact cells in response to activation of PKC has not been rigorously demonstrated. In this thesis, the extent to which themore » {alpha} subunits of G{sub i} undergo phosphorylation within human platelets in response to activation of PKC was examined by means of radiolabeling and immunoprecipitation. Incubation of platelets with phorbol-12-myristate-13-acetate (PMA), a potent activator of PKC, promoted the phosphorylation of several proteins within saponin-permeabilized and intact platelets incubated with ({gamma}{sup 32}P)ATP and ({sup 32}P)H{sub 3}PO{sub 4}, respectively. None of the phosphoproteins, however, were precipitated by either of two antisera containing antibodies differing in specificities for epitopes within G{sub i{alpha}}-despite precipitation of a substantial fraction of the subunit itself. In contrast, other antisera, containing antibodies specific for the recently describe G{sub z{alpha}}, or antibodies for both G{sub z{alpha}} and G{sub i{alpha}}, precipitated a 40-kDa phosphoprotein.« less

  13. Incorporating reaction-rate dependence in reaction-front models of wellbore-cement/carbonated-brine systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Iyer, Jaisree; Walsh, Stuart D. C.; Hao, Yue

    Contact between wellbore cement and carbonated brine produces reaction zones that alter the cement's chemical composition and its mechanical properties. The reaction zones have profound implications on the ability of wellbore cement to serve as a seal to prevent the flow of carbonated brine. Under certain circumstances, the reactions may cause resealing of leakage pathways within the cement or at cement-interfaces; either due to fracture closure in response to mechanical weakening or due to the precipitation of calcium carbonate within the fracture. In prior work, we showed how mechanical sealing can be simulated using a diffusion-controlled reaction-front model that linksmore » the growth of the cement reaction zones to the mechanical response of the fracture. Here, we describe how such models may be extended to account for the effects of the calcite reaction-rate. We discuss how the relative rates of reaction and diffusion within the cement affect the precipitation of calcium carbonate within narrow leakage pathways, and how such behavior relates to the formation of characteristic reaction modes in the direction of flow. In addition, we compare the relative impact of precipitation and mechanical deformation on fracture sealing for a range of flow conditions and fracture apertures. Here, we conclude by considering how the prior leaching of calcium from cement may influence the sealing behavior of fractures, and the implication of prior leaching on the ability of laboratory tests to predict long-term sealing.« less

  14. A novel approach to select differential pathways associated with hypertrophic cardiomyopathy based on gene co‑expression analysis.

    PubMed

    Chen, Xiao-Min; Feng, Ming-Jun; Shen, Cai-Jie; He, Bin; Du, Xian-Feng; Yu, Yi-Bo; Liu, Jing; Chu, Hui-Min

    2017-07-01

    The present study was designed to develop a novel method for identifying significant pathways associated with human hypertrophic cardiomyopathy (HCM), based on gene co‑expression analysis. The microarray dataset associated with HCM (E‑GEOD‑36961) was obtained from the European Molecular Biology Laboratory‑European Bioinformatics Institute database. Informative pathways were selected based on the Reactome pathway database and screening treatments. An empirical Bayes method was utilized to construct co‑expression networks for informative pathways, and a weight value was assigned to each pathway. Differential pathways were extracted based on weight threshold, which was calculated using a random model. In order to assess whether the co‑expression method was feasible, it was compared with traditional pathway enrichment analysis of differentially expressed genes, which were identified using the significance analysis of microarrays package. A total of 1,074 informative pathways were screened out for subsequent investigations and their weight values were also obtained. According to the threshold of weight value of 0.01057, 447 differential pathways, including folding of actin by chaperonin containing T‑complex protein 1 (CCT)/T‑complex protein 1 ring complex (TRiC), purine ribonucleoside monophosphate biosynthesis and ubiquinol biosynthesis, were obtained. Compared with traditional pathway enrichment analysis, the number of pathways obtained from the co‑expression approach was increased. The results of the present study demonstrated that this method may be useful to predict marker pathways for HCM. The pathways of folding of actin by CCT/TRiC and purine ribonucleoside monophosphate biosynthesis may provide evidence of the underlying molecular mechanisms of HCM, and offer novel therapeutic directions for HCM.

  15. Projections of Future Precipitation Extremes Over Europe: A Multimodel Assessment of Climate Simulations

    NASA Astrophysics Data System (ADS)

    Rajczak, Jan; Schär, Christoph

    2017-10-01

    Projections of precipitation and its extremes over the European continent are analyzed in an extensive multimodel ensemble of 12 and 50 km resolution EURO-CORDEX Regional Climate Models (RCMs) forced by RCP2.6, RCP4.5, and RCP8.5 (Representative Concentration Pathway) aerosol and greenhouse gas emission scenarios. A systematic intercomparison with ENSEMBLES RCMs is carried out, such that in total information is provided for an unprecedentedly large data set of 100 RCM simulations. An evaluation finds very reasonable skill for the EURO-CORDEX models in simulating temporal and geographical variations of (mean and heavy) precipitation at both horizontal resolutions. Heavy and extreme precipitation events are projected to intensify across most of Europe throughout the whole year. All considered models agree on a distinct intensification of extremes by often more than +20% in winter and fall and over central and northern Europe. A reduction of rainy days and mean precipitation in summer is simulated by a large majority of models in the Mediterranean area, but intermodel spread between the simulations is large. In central Europe and France during summer, models project decreases in precipitation but more intense heavy and extreme rainfalls. Comparison to previous RCM projections from ENSEMBLES reveals consistency but slight differences in summer, where reductions in southern European precipitation are not as pronounced as previously projected. The projected changes of the European hydrological cycle may have substantial impact on environmental and anthropogenic systems. In particular, the simulations indicate a rising probability of summertime drought in southern Europe and more frequent and intense heavy rainfall across all of Europe.

  16. Changes of Climate Extremes in Urmia Lake Basin: Observations and Multimodel Ensemble Projections

    NASA Astrophysics Data System (ADS)

    Ashraf, B.; AghaKouchak, A.

    2017-12-01

    This study presents an analysis of the changes in temperature and precipitation extremes in Urmia Lake Basin, in Iran in 21th century. The latest observations in the past three decades and multimodel ensemble projections from eleven General Circulation Models (GCMs) under the three Representative Concentration Pathways (RCPs) 2.6, 4.5 and 8.5 scenarios are employed for analysis in this study. The twenty-seven indicative temperature and precipitation indices recommended by the joint World Meteorological Organization CCL/CLIVAR/JCOMM Expert Team on Climate Change Detection and Indices (ETCCDI) were used for assessing changes in extremes. Results indicate that most warm (cold) extreme temperature indices have shown significantly positive (negative) trends in the Urmia Lake Basin in past three decades, while only slight changes in precipitation extremes can be observed. Ensemble projection from Bayesian Model Averaging (BMA) of Phase 5 of the Coupled Model Intercomparison Project (CMIP5) suggests that the increasing consecutive dry days (CDD), together with the decreasing frost day (FD) and increasing warm nights frequency (TN90) contribute to more frequent/severe droughts in Urmia Lake Basin. Meanwhile, the results show slight increase of annual count of days with precipitation of more than 10 mm (R10), maximum 5-day precipitation total (R5D), simple daily intensity index (SDII), and annual total precipitation with precipitation >95th percentile (R95) in projections. Our finding provides information on how extremes might change in the future from a wide range of scenarios that can potentially be sued for water resource and eco-environmental planning and adaptation strategies.

  17. Carbon storage potential of Columbia River flood basalt

    NASA Astrophysics Data System (ADS)

    Wells, R. K.; Xiong, W.; Giammar, D.; Skemer, P. A.

    2017-12-01

    Basalt reservoirs are an important option for sequestering carbon through dissolution of host rock and precipitation of stable carbonate minerals. This study seeks to understand the nature of dissolution and surface roughening processes and their influence on the timing and spatial distribution of carbonation, in static experiments at 150 °C and 100 bar CO2. Intact samples and cores with milled pathways from Ca-rich and Fe-rich Columbia River flood basalt formations were reacted for up to 40 weeks. Experimental specimens were analyzed using SEM-EDS, microprobe, and μCT scanning, Raman spectroscopy, and 2D profilometer to characterize changes in composition and surface roughness. ICP-MS was used to examine bulk fluid chemistry. Initial dissolution of olivine grains results in higher Mg2+ and Fe2+ concentrations within the bulk solution in the first week of reaction. However, once available olivine grains are gone, Ca-rich pyroxene becomes the primary contributor of Ca2+, Mg2+, and Fe2+ within the bulk solution. The complete dissolution of olivine grains resulted in pits up to 200 μm deep. Dissolution of other minerals resulted in the formation of microscale textures, primarily along grain boundaries and fractures. The surface roughness increased by factors of up to 42, while surface area increased 20%. Based on these results, pyroxene is the sustaining contributor of divalent metal cations during dissolution of basalt, and the limited connectivity of olivine and pyroxene grains limits the exposure of new reactive surface areas. Within 6 weeks, aragonite precipitated in Ca-rich basalt samples, while Fe-rich samples precipitated of siderite. The highest concentration of carbonates occurs 1/3 into milled pathways, which simulate dead-end fractures, in low porosity basalts, and near the fracture tip in high porosity basalts. Even at elevated temperatures, the fractures are not blocked nor filled within 40 weeks of reaction. When vesicles are present, carbonates can precipitate within these pores even when the pores do not appear to connect to the main fracture pathway. Based on our experimental results, we estimate the carbon storage potential of the Ca-rich formations within the Columbia River flood basalt to be 47 kg CO2/m3, which could be reached in 38 years at a constant carbonation rate of 1.24 ± 0.54 kg CO2/m3yr.

  18. Effect of temperature on the reaction pathway of calcium carbonate formation via precursor phases

    NASA Astrophysics Data System (ADS)

    Purgstaller, Bettina; Mavromatis, Vasileios; Konrad, Florian; Dietzel, Martin

    2016-04-01

    It has been earlier postulated that some biogenic and sedimentary calcium carbonate (CaCO3) minerals (e.g. calcite and aragonite) are secondary in origin and have originally formed via a metastable calcium carbonate precursor phase (e.g. amorphous CaCO3, [1-2]). Such formation pathways are likely affected by various physicochemical parameters including aqueous Mg and temperature. In an effort to improve our understanding on the formation mechanism of CaCO3 minerals, precipitation experiments were carried out by the addition of a 0.6 M (Ca,Mg)Cl2 solution at distinct Mg/Ca ratios (1/4 and 1/8) into a 1 M NaHCO3 solution under constant pH conditions(8.3 ±0.1). The formation of CaCO3 was systematically examined as a function of temperature (6, 12, 18 and 25 ±0.3° C). During the experimental runs mineral precipitation was monitored by in situ Raman spectroscopy as well as by continuous sampling and analyzing of precipitates and reactive solutions. The results revealed two pathways of CaCO3 formation depending on the initial Mg/Ca ratio and temperature: (i) In experiments with a Mg/Ca ratio of 1/4 at ≤ 12° C as well as in experiments with a Mg/Ca ratio of 1/8 at ≤ 18° C, ikaite (CaCO3 6H2O) acts as a precursor phase for aragonite formation. (ii) In contrast higher temperatures induced the formation of Mg-rich amorphous CaCO3 (Mg-ACC) which was subsequently transformed to Mg-rich calcite. In situ Raman spectra showed that the transformation of Mg-ACC to Mg-calcite occurs at a higher rate (˜ 8 min) compared to that of ikaite to aragonite (> 2 h). Thus, the formation of aragonite rather than of Mg-calcite occurs due to the slower release of Ca2+and CO32- ions into the Mg-rich reactive solution during retarded ikaite dissolution. This behavior is generally consistent with the observation that calcite precipitation is inhibited at elevated aqueous Mg/Ca ratios. [1] Addadi L., Raz S. and Weiner S. (2003) Advanced Materials 15, 959-970. [2] Rodriguez-Blanco J. D., Shaw S., Bots P., Roncal-Herrero T. and Benning L. G (2014) Geochimica et Cosmochimica Acta 127, 204-220

  19. Projected changes of extreme precipitation over Contiguous United States with Nested regional climate model (NRCM)

    NASA Astrophysics Data System (ADS)

    Wang, J.

    2013-12-01

    Extreme weather events have already significantly influenced North America. During 2005-2011, the extreme events have increased by 250 %, from four or fewer events occurring in 2005, while 14 events occurring in 2011 (www.ncdc.noaa.gov/billions/). In addition, extreme rainfall amounts, frequency, and intensity were all expected to increase under greenhouse warming scenarios (Wehner 2005; Kharin et al. 2007; Tebaldi et al. 2006). Global models are powerful tools to investigate the climate and climate change on large scales. However, such models do not represent local terrain and mesoscale weather systems well owing to their coarse horizontal resolution (150-300 km). To capture the fine-scale features of extreme weather events, regional climate models (RCMs) with a more realistic representation of the complex terrain and heterogeneous land surfaces are needed (Mass et al. 2002). This study uses the Nested Regional Climate model (NRCM) to perform regional scale climate simulations on a 12-km × 12-km high resolution scale over North America (including Alaska; with 600 × 515 grid cells at longitude and latitude), known as CORDEX_North America, instead of small regions as studied previously (eg., Dominguez et al. 2012; Gao et al. 2012). The performance and the biases of the NRCM extreme precipitation calculations (2000-2010) have been evaluated with PRISM precipitation (Daly et al. 1997) by Wang and Kotamarthi (2013): the NRCM replicated very well the monthly amount of extreme precipitation with less than 3% overestimation over East CONUS, and the frequency of extremes over West CONUS and upper Mississippi River Basin. The Representative Concentration Pathway (RCP) 8.5 and RCP 4.5 from the new Community Earth System Model version 1.0 (CESM v1.0) are dynamically downscaled to predict the extreme rainfall events at the end-of-century (2085-2095) and to explore the uncertainties of future extreme precipitation induced by different scenarios over distinct regions. We have corrected the CO2 atmospheric concentration in the longwave/shortwave radiation schemes of the NRCM according to the recommended datasets by CMIP5 (Clarke et al. 2007; Riahi et al. 2007). We have also corrected an inconsistency in skin temperature during the downscaling process by modifying the land/sea mask of CLM 4.0 as mentioned by Gao et al. (2012). Acknowledgements: This work was supported under a military interdepartmental purchase request from the SERDP, RC-2242, through U.S. Department of Energy contract DE-AC02-06CH11357.

  20. Supramolecular assemblies of a nitrogen-embedded buckybowl dimer with C60† †Electronic supplementary information (ESI) available. CCDC 1579079 and 1579080. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c7sc04453d

    PubMed Central

    Yokoi, Hiroki; Sakamaki, Daisuke; Seki, Shu

    2017-01-01

    A directly connected azabuckybowl dimer was synthesized via a palladium-catalysed C–H/C–Br coupling. The electron-donating nature of the pyrrolic nitrogen atoms of the azabuckybowl enabled a strong complexation with pristine C60. In the presence of two equivalents of C60, the azabuckybowl dimer formed crystals with a 1 : 2 stoichiometry. Conversely, in diluted solution, complexes with a 1 : 1 stoichiometry of the dimer and C60 were detected predominantly, and these precipitated upon increasing the concentration of C60. Scanning electron microscopy images of the precipitate showed fibre-like aggregates, indicating the formation of supramolecular assemblies with 1D chain structures. A variable-temperature 1H NMR analysis revealed that the precipitate consists of the dimer and C60 in a 1 : 1 ratio. PMID:29629149

  1. Retardation of iron-cyanide complexes in the soil of a former manufactured gas plant site.

    PubMed

    Sut, Magdalena; Repmann, Frank; Raab, Thomas

    2015-01-01

    The soil in the vicinities of former Manufactured Gas Plant (MGP) sites is commonly contaminated with iron-cyanide complexes (ferric ferrocyanide). The phenomenon of cyanide mobility in soil, according to the literature, is mainly governed by the dissolution and precipitation of ferric ferrocyanide, which is only slightly soluble (<1 mg L(-1)) under acidic conditions. In this paper, retention properties of the sandy loam soil and the potential vertical movement of the solid iron-cyanide complexes, co-existing with the dissolution, sorption and precipitation reactions were investigated. Preliminary research conducted on a former MGP site implied colloidal transport of ferric ferricyanide from the initial deposition in the wastes layer towards the sandy loam material (secondary accumulation), which possibly retarded the mobility of cyanide (CN). A series of batch and column experiments were applied in order to investigate the retardation of iron-cyanide complexes by the sandy loam soil. Batch experiments revealed that in circumneutral pH conditions sandy loam material decreases the potassium ferro- and ferricyanide concentration. In column experiments a minor reduction in CN concentration was observed prior to addition of iron sulfide (FeS) layer, which induced the formation of the Prussian blue colloids in circumneutral pH conditions. Precipitated solid iron-cyanide complexes were mechanically filtered by the coherent structure of the investigated soil. Additionally, the reduction of the CN concentration of the percolation solutions by the sandy loam soil was presumably induced due to the formation of potassium manganese iron-cyanide (K2Mn[Fe(CN)6]).

  2. FAAP20: a novel ubiquitin-binding FA nuclear core-complex protein required for functional integrity of the FA-BRCA DNA repair pathway

    PubMed Central

    Ali, Abdullah Mahmood; Pradhan, Arun; Singh, Thiyam Ramsingh; Du, Changhu; Li, Jie; Wahengbam, Kebola; Grassman, Elke; Auerbach, Arleen D.; Pang, Qishen

    2012-01-01

    Fanconi anemia (FA) nuclear core complex is a multiprotein complex required for the functional integrity of the FA-BRCA pathway regulating DNA repair. This pathway is inactivated in FA, a devastating genetic disease, which leads to hematologic defects and cancer in patients. Here we report the isolation and characterization of a novel 20-kDa FANCA-associated protein (FAAP20). We show that FAAP20 is an integral component of the FA nuclear core complex. We identify a region on FANCA that physically interacts with FAAP20, and show that FANCA regulates stability of this protein. FAAP20 contains a conserved ubiquitin-binding zinc-finger domain (UBZ), and binds K-63–linked ubiquitin chains in vitro. The FAAP20-UBZ domain is not required for interaction with FANCA, but is required for DNA-damage–induced chromatin loading of FANCA and the functional integrity of the FA pathway. These findings reveal critical roles for FAAP20 in the FA-BRCA pathway of DNA damage repair and genome maintenance. PMID:22343915

  3. Validation of High Resolution Orbital Precipitation Over Upper Mahanadi River Basin, India

    NASA Astrophysics Data System (ADS)

    Gautam, A. K.; Pandey, A.

    2016-12-01

    Precipitation is one of the most important component of hydrologic cycle and used for various applications i.e. hydrological modeling, structure design to water management policy. Satellite based precipitation, radar rainfall and rain-gauge networks are supporting to each other, in relation to their spatial coverage and ability of observing precipitation. In the absence of rainfall data, satellite precipitation products can be used in the developing countries and over complex terrain where precipitation observations are either sparse or not available. However, satellite precipitation estimates are affected by different errors (AghaKouchak, et al., 2012.). Therefore, ground validation of satellite precipitation estimates is essential. In this study, the upper Mahanadi River Basin (A Part of Central India), has been selected for evaluation of the TRMM multi-satellite precipitation analysis (TMPA) and IMERG (Integrated Multi-satellite Retrievals for GPM) satellite Based Precipitation Products for the period of April 2014 - December 2015. The TMPA (3B42V7) and IMERG (late run) precipitation estimates were evaluated using statistical, contingency table and volumetric method for available 112 rain gauge stations in the study area. Results indicated that, both IMERG and TMPA precipitation overestimated the daily precipitation. The results also revealed that IMERG precipitation estimates provide better accuracy than TMPA precipitation estimates for very light rain (0.1-2.5 mm day-1), light rain (2.5-7.5 mm day-1), moderate rain (7.5-35.5 mm day-1), heavy rain (35.5-64.5 mm day-1) and very heavy rain (>64.5 mm day-1). Although, the detection capability of daily TMPA precipitation performed better in heavy rain. The results showed a good correlation (as high as 0.84) and poor correlation (as low as 0.012) with GPM satellite data over the most parts of the study area. The analyses suggest that, there is a need for improvement in precipitation estimation algorithm and accuracy verification against raingauge precipitation measurement to capture the rain events reliably in the study area.

  4. Come rain or shine: Multi-model Projections of Climate Hazards affecting Transportation in the South Central United States

    NASA Astrophysics Data System (ADS)

    Mullens, E.; Mcpherson, R. A.

    2016-12-01

    This work develops detailed trends in climate hazards affecting the Department of Transportation's Region 6, in the South Central U.S. Firstly, a survey was developed to gather information regarding weather and climate hazards in the region from the transportation community, identifying key phenomena and thresholds to evaluate. Statistically downscaled datasets were obtained from the Multivariate Adaptive Constructed Analogues (MACA) project, and the Asynchronous Regional Regression Model (ARRM), for a total of 21 model projections, two coupled model intercomparisons (CMIP3, and CMIP5), and four emissions pathways (A1Fi, B1, RCP8.5, RCP4.5). Specific hazards investigated include winter weather, freeze-thaw cycles, hot and cold extremes, and heavy precipitation. Projections for each of these variables were calculated for the region, utilizing spatial mapping, and time series analysis at the climate division level. The results indicate that cold-season phenomena such as winter weather, freeze-thaw, and cold extremes, decrease in intensity and frequency, particularly with the higher emissions pathways. Nonetheless, specific model and downscaling method yields variability in magnitudes, with the most notable decreasing trends late in the 21st century. Hot days show a pronounced increase, particularly with greater emissions, producing annual mean 100oF day frequencies by late 21st century analogous to the 2011 heatwave over the central Southern Plains. Heavy precipitation, evidenced by return period estimates and counts-over-thresholds, also show notable increasing trends, particularly between the recent past through mid-21st Century. Conversely, mean precipitation does not show significant trends and is regionally variable. Precipitation hazards (e.g., winter weather, extremes) diverge between downscaling methods and their associated model samples much more substantially than temperature, suggesting that the choice of global model and downscaled data is particularly important when considering region-specific impacts for precipitation. These results are intended to inform region transportation professionals of the susceptibility of the area to climate extremes, and to be a resource for assessing and incorporating changing risk probabilities into their planning processes.

  5. Time-fractional characterization of brine reaction and precipitation in porous media

    NASA Astrophysics Data System (ADS)

    Xu, Jianping; Jiang, Guancheng

    2018-04-01

    Brine reaction and precipitation in porous media sometimes occur in the presence of a strong fluid flowing field, which induces the mobilization of the precipitated salts and distorts their spatial distribution. It is interesting to investigate how the distribution responds to such mobilization. We view these precipitates as random walkers in the complex inner space of the porous media, where they make stochastic jumps among locations and possibly wait between successive transitions. In consideration of related experimental results, the waiting time of the precipitates at a particular position is allowed to range widely from short sojourn to permanent residence. Through the model of a continuous-time random walk, a class of time-fractional equations for the precipitate's concentration profile is derived, including that in the Riemann-Liouville formalism and the Prabhakar formalism. The solutions to these equations show the general pattern of the precipitate's spatiotemporal evolution: a coupling of mass accumulation and mass transport. And the degree to which the mass is mobilized turns out to be monotonically correlated to the fractional exponent α . Moreover, to keep the completeness of the model, we further discuss how the interaction among the precipitates influences the precipitation process. In doing so, a time-fractional non-linear Fokker-Planck equation with source term is introduced and solved. It is shown that the interaction among the precipitates slightly perturbs their spatial distribution. This distribution is largely dominated by the brine reaction itself and the interaction between the precipitates and the porous media.

  6. Estimating mountain basin-mean precipitation from streamflow using Bayesian inference

    NASA Astrophysics Data System (ADS)

    Henn, Brian; Clark, Martyn P.; Kavetski, Dmitri; Lundquist, Jessica D.

    2015-10-01

    Estimating basin-mean precipitation in complex terrain is difficult due to uncertainty in the topographical representativeness of precipitation gauges relative to the basin. To address this issue, we use Bayesian methodology coupled with a multimodel framework to infer basin-mean precipitation from streamflow observations, and we apply this approach to snow-dominated basins in the Sierra Nevada of California. Using streamflow observations, forcing data from lower-elevation stations, the Bayesian Total Error Analysis (BATEA) methodology and the Framework for Understanding Structural Errors (FUSE), we infer basin-mean precipitation, and compare it to basin-mean precipitation estimated using topographically informed interpolation from gauges (PRISM, the Parameter-elevation Regression on Independent Slopes Model). The BATEA-inferred spatial patterns of precipitation show agreement with PRISM in terms of the rank of basins from wet to dry but differ in absolute values. In some of the basins, these differences may reflect biases in PRISM, because some implied PRISM runoff ratios may be inconsistent with the regional climate. We also infer annual time series of basin precipitation using a two-step calibration approach. Assessment of the precision and robustness of the BATEA approach suggests that uncertainty in the BATEA-inferred precipitation is primarily related to uncertainties in hydrologic model structure. Despite these limitations, time series of inferred annual precipitation under different model and parameter assumptions are strongly correlated with one another, suggesting that this approach is capable of resolving year-to-year variability in basin-mean precipitation.

  7. DNA double-strand–break complexity levels and their possible contributions to the probability for error-prone processing and repair pathway choice

    PubMed Central

    Schipler, Agnes; Iliakis, George

    2013-01-01

    Although the DNA double-strand break (DSB) is defined as a rupture in the double-stranded DNA molecule that can occur without chemical modification in any of the constituent building blocks, it is recognized that this form is restricted to enzyme-induced DSBs. DSBs generated by physical or chemical agents can include at the break site a spectrum of base alterations (lesions). The nature and number of such chemical alterations define the complexity of the DSB and are considered putative determinants for repair pathway choice and the probability that errors will occur during this processing. As the pathways engaged in DSB processing show distinct and frequently inherent propensities for errors, pathway choice also defines the error-levels cells opt to accept. Here, we present a classification of DSBs on the basis of increasing complexity and discuss how complexity may affect processing, as well as how it may cause lethal or carcinogenic processing errors. By critically analyzing the characteristics of DSB repair pathways, we suggest that all repair pathways can in principle remove lesions clustering at the DSB but are likely to fail when they encounter clusters of DSBs that cause a local form of chromothripsis. In the same framework, we also analyze the rational of DSB repair pathway choice. PMID:23804754

  8. High-resolution projections of mean and extreme precipitations over China through PRECIS under RCPs

    NASA Astrophysics Data System (ADS)

    Zhu, Jinxin; Huang, Gordon; Wang, Xiuquan; Cheng, Guanhui; Wu, Yinghui

    2018-06-01

    The impact of global warming on the characteristics of mean and extreme precipitations over China is investigated by using the Providing REgional Climate Impacts for Studies (PRECIS) model. The PRECIS model was driven by the Hadley Centre Global Environment Model version 2 with Earth System components and coupling (HadGEM2-ES). The results of both models are analyzed in terms of mean precipitation and indices of precipitation extremes (R95p, R99p, SDII, WDF, and CWD) over China at the resolution of 25 km under the Representative Concentration Pathways 4.5 and 8.5 (RCP4.5 and RCP8.5) scenarios for the baseline period (1976-2005) and two future periods (2036-2065 and 2070-2099). With improved resolution, the PRECIS model is able to better represent the fine-scale physical process than HadGEM2-ES. It can provide reliable spatial patterns of precipitation and its related extremes with high correlations to observations. Moreover, there is a notable improvement in temporal patterns simulation through the PRECIS model. The PRECIS model better reproduces the regional annual cycle and frequencies of daily precipitation intensity than its driving GCM. Under RCP4.5 and RCP8.5, both the HadGEM2-ES and the precis project increasing annual precipitation over the entire country for two future periods. Precipitation increase in winter is greater than the increase in summer. The results suggest that increased radiative forcing from RCP4.5 to RCP8.5 would further intensify the magnitude of projected precipitation changes by both PRECIS and HadGEM2-ES. For example, some parts of south China with decreased precipitation under RCP4.5 would expect even less precipitation under RCP8.5; regions (northwest, northcentral and northeast China) with increased precipitation under RCP4.5 would expect more precipitation under RCP8.5. Apart from the projected increase in annual total precipitation, the results also suggest that there will be an increase in the days with precipitation higher than 15 mm and a decrease in the days with precipitation less than 5 mm. Under both RCPs, there would be an increasing trend in the magnitude of changes in precipitation extremes indices (R95p, R99p, and SDII) over China, while an opposite trend is projected for CWD and no apparent trend is projected for WDF from 2036-2065 to 2070-2099. Increased extreme precipitation amounts accompanied with decreased frequencies of extreme precipitation suggest that the future daily extreme precipitation intensity is likely to become large in northeast China and south China.

  9. A new type of polymeric heavy metal complexing precipitant used as fishery disinfectant and antiparasitic drug

    NASA Astrophysics Data System (ADS)

    Liu, Y. C.; Zhang, A. N.; Wang, X. B.; Xu, J.; Zeng, X. H.; Wang, H. M.

    2017-08-01

    This paper presents a technique to produce a new kind of fishery drug that is water emulsion suspending agent containing polymeric calcium-iron-dithiocarbamate with heavy metal complexing precipitate ability, good disinfection and auxiliary insecticidal efficacy. The product has good dispersion, high efficiency and low toxicity, as well as no pollution and no harmful residues. It not only can be used in the pond waters and ornamental waters, but also can meet the high requirements of the aquaculture waters. There is non-pollutant emission in the production, which is a green environment-friendly technique without three waste discharges. This technology belongs to the ecological and environmental protection.

  10. A System-Level Pathway-Phenotype Association Analysis Using Synthetic Feature Random Forest

    PubMed Central

    Pan, Qinxin; Hu, Ting; Malley, James D.; Andrew, Angeline S.; Karagas, Margaret R.; Moore, Jason H.

    2015-01-01

    As the cost of genome-wide genotyping decreases, the number of genome-wide association studies (GWAS) has increased considerably. However, the transition from GWAS findings to the underlying biology of various phenotypes remains challenging. As a result, due to its system-level interpretability, pathway analysis has become a popular tool for gaining insights on the underlying biology from high-throughput genetic association data. In pathway analyses, gene sets representing particular biological processes are tested for significant associations with a given phenotype. Most existing pathway analysis approaches rely on single-marker statistics and assume that pathways are independent of each other. As biological systems are driven by complex biomolecular interactions, embracing the complex relationships between single-nucleotide polymorphisms (SNPs) and pathways needs to be addressed. To incorporate the complexity of gene-gene interactions and pathway-pathway relationships, we propose a system-level pathway analysis approach, synthetic feature random forest (SF-RF), which is designed to detect pathway-phenotype associations without making assumptions about the relationships among SNPs or pathways. In our approach, the genotypes of SNPs in a particular pathway are aggregated into a synthetic feature representing that pathway via Random Forest (RF). Multiple synthetic features are analyzed using RF simultaneously and the significance of a synthetic feature indicates the significance of the corresponding pathway. We further complement SF-RF with pathway-based Statistical Epistasis Network (SEN) analysis that evaluates interactions among pathways. By investigating the pathway SEN, we hope to gain additional insights into the genetic mechanisms contributing to the pathway-phenotype association. We apply SF-RF to a population-based genetic study of bladder cancer and further investigate the mechanisms that help explain the pathway-phenotype associations using SEN. The bladder cancer associated pathways we found are both consistent with existing biological knowledge and reveal novel and plausible hypotheses for future biological validations. PMID:24535726

  11. Evaluation of the WRF model for precipitation downscaling on orographic complex islands

    NASA Astrophysics Data System (ADS)

    Díaz, Juan P.; González, Albano; Expósito, Francisco; Pérez, Juan C.

    2010-05-01

    General Circulation Models (GCMs) have proven to be an effective tool to simulate many aspects of large-scale and global climate. However, their applicability to climate impact studies is limited by their capabilities to resolve regional scale situations. In this sense, dynamical downscaling techniques are an appropriate alternative to estimate high resolution regional climatologies. In this work, the Weather Research and Forecasting model (WRF) has been used to simulate precipitations over the Canary Islands region during 2009. The precipitation patterns over Canary Islands, located at North Atlantic region, show large gradients over a relatively small geographical area due to large scale factors such as Trade Winds regime predominant in the area and mesoscale factors mainly due to the complex terrain. Sensitivity study of simulated WRF precipitations to variations in model setup and parameterizations was carried out. Thus, WRF experiments were performed using two way nesting at 3 km horizontal grid spacing and 28 vertical levels in the Canaries inner domain. The initial and lateral and lower boundary conditions for the outer domain were provided at 6 hourly intervals by NCEP FNL (Final) Operational Global Analysis data on 1.0x1.0 degree resolution interpolated onto the WRF model grid. Numerous model options have been tested, including different microphysics schemes, cumulus parameterizations and nudging configuration Positive-definite moisture advection condition was also checked. Two integration approaches were analyzed: a 1-year continuous long-term integration and a consecutive short-term monthly reinitialized integration. To assess the accuracy of our simulations, model results are compared against observational datasets obtained from a network of meteorological stations in the region. In general, we can observe that the regional model is able to reproduce the spatial distribution of precipitation, but overestimates rainfall, mainly during strong precipitation events.

  12. An Investigation of Topography Modulated Low Level Moisture Convergence Patterns in the Southern Appalachians Using WRF

    NASA Astrophysics Data System (ADS)

    Wilson, A. M.; Duan, Y.; Barros, A.

    2015-12-01

    The Southern Appalachian Mountains (SAM) region is a biodiversity hot-spot that is vulnerable to land use/land cover changes due to its proximity to the rapidly growing population in the Southeast U.S. Persistent near surface moisture and associated microclimates observed in this region have been documented since the colonization of the area. The landform in this area, in particular in the inner mountain region, is highly complex with nested valleys and ridges. The geometry of the terrain causes distinct diurnal and seasonal local flow patterns that result in highly complex interactions of this low level moisture with meso- and synoptic-scale cyclones passing through the region. The Weather Research and Forecasting model (WRF) was used to conduct high resolution simulations of several case studies of warm season precipitation in the SAM with different synoptic-scale conditions to investigate this interaction between local and larger-scale flow patterns. The aim is to elucidate the microphysical interactions among these shallow orographic clouds and preexisting precipitating cloud systems and identify uncertainties in the model microphysics using in situ measurements. Findings show that ridge-valley precipitation gradients, in particular the "reverse" to the classical orographic effect observed in inner mountain valleys, is linked to horizontal heterogeneity in the vertical structure of low level cloud and precipitation promoted through landform controls on local flow. Moisture convergence patterns follow the peaks and valleys as represented by WRF terrain, and the topography effectively controls their timing and spatial structure. The simulations support the hypothesis that ridge-valley precipitation gradients, and in particular the reverse orographic enhancement effect in inner mountain valleys, is linked to horizontal heterogeneity in the vertical structure of low level clouds and precipitation promoted through landform controls on moisture convergence.

  13. The influence of subsurface hydrodynamics on convective precipitation

    NASA Astrophysics Data System (ADS)

    Rahman, A. S. M. M.; Sulis, M.; Kollet, S. J.

    2014-12-01

    The terrestrial hydrological cycle comprises complex processes in the subsurface, land surface, and atmosphere, which are connected via complex non-linear feedback mechanisms. The influence of subsurface hydrodynamics on land surface mass and energy fluxes has been the subject of previous studies. Several studies have also investigated the soil moisture-precipitation feedback, neglecting however the connection with groundwater dynamics. The objective of this study is to examine the impact of subsurface hydrodynamics on convective precipitation events via shallow soil moisture and land surface processes. A scale-consistent Terrestrial System Modeling Platform (TerrSysMP) that consists of an atmospheric model (COSMO), a land surface model (CLM), and a three-dimensional variably saturated groundwater-surface water flow model (ParFlow), is used to simulate hourly mass and energy fluxes over days with convective rainfall events over the Rur catchment, Germany. In order to isolate the effect of groundwater dynamics on convective precipitation, two different model configurations with identical initial conditions are considered. The first configuration allows the groundwater table to evolve through time, while a spatially distributed, temporally constant groundwater table is prescribed as a lower boundary condition in the second configuration. The simulation results suggest that groundwater dynamics influence land surface soil moisture, which in turn affects the atmospheric boundary layer (ABL) height by modifying atmospheric thermals. It is demonstrated that because of this sensitivity of ABL height to soil moisture-temperature feedback, the onset and magnitude of convective precipitation is influenced by subsurface hydrodynamics. Thus, the results provide insight into the soil moisture-precipitation feedback including groundwater dynamics in a physically consistent manner by closing the water cycle from aquifers to the atmosphere.

  14. Linear and nonlinear characteristics of the runoff response to regional climate factors in the Qira River basin, Xinjiang, Northwest China.

    PubMed

    Xue, Jie; Gui, Dongwei

    2015-01-01

    The inland river watersheds of arid Northwest China represent an example of how, in recent times, climatic warming has increased the complexity of Earth's hydrological processes. In the present study, the linear and nonlinear characteristics of the runoff response to temperature and precipitation were investigated in the Qira River basin, located on the northern slope of the Kunlun Mountains. The results showed that average temperature on annual and seasonal scales has displayed a significantly increasing trend, but this has not been reflected in accumulated precipitation and runoff. Using path analysis, a positive link between precipitation and runoff was found both annually and in the summer season. Conversely, it was found that the impact of temperature on runoff has been negative since the 1960s, attributable to higher evaporation and infiltration in the Qira River basin. Over the past 50 years, abrupt changes in annual temperature, precipitation and runoff occurred in 1997, 1987 and 1995, respectively. Combined with analysis using the correlation dimension method, it was found that the temperature, precipitation and runoff, both annually and seasonally, possessed chaotic dynamic characteristics, implying that complex hydro-climatic processes must be introduced into other variables within models to describe the dynamics. In addition, as determined via rescaled range analysis, a consistent annual and seasonal decreasing trend in runoff under increasing temperature and precipitation conditions in the future should be taken into account. This work may provide a theoretical perspective that can be applied to the proper use and management of oasis water resources in the lower reaches of river basins like that of the Qira River.

  15. Linear and nonlinear characteristics of the runoff response to regional climate factors in the Qira River basin, Xinjiang, Northwest China

    PubMed Central

    Xue, Jie

    2015-01-01

    The inland river watersheds of arid Northwest China represent an example of how, in recent times, climatic warming has increased the complexity of Earth’s hydrological processes. In the present study, the linear and nonlinear characteristics of the runoff response to temperature and precipitation were investigated in the Qira River basin, located on the northern slope of the Kunlun Mountains. The results showed that average temperature on annual and seasonal scales has displayed a significantly increasing trend, but this has not been reflected in accumulated precipitation and runoff. Using path analysis, a positive link between precipitation and runoff was found both annually and in the summer season. Conversely, it was found that the impact of temperature on runoff has been negative since the 1960s, attributable to higher evaporation and infiltration in the Qira River basin. Over the past 50 years, abrupt changes in annual temperature, precipitation and runoff occurred in 1997, 1987 and 1995, respectively. Combined with analysis using the correlation dimension method, it was found that the temperature, precipitation and runoff, both annually and seasonally, possessed chaotic dynamic characteristics, implying that complex hydro-climatic processes must be introduced into other variables within models to describe the dynamics. In addition, as determined via rescaled range analysis, a consistent annual and seasonal decreasing trend in runoff under increasing temperature and precipitation conditions in the future should be taken into account. This work may provide a theoretical perspective that can be applied to the proper use and management of oasis water resources in the lower reaches of river basins like that of the Qira River. PMID:26244113

  16. Characterization of extreme precipitation within atmospheric river events over California

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jeon, S.; Prabhat,; Byna, S.

    Atmospheric rivers (ARs) are large, spatially coherent weather systems with high concentrations of elevated water vapor. These systems often cause severe downpours and flooding over the western coastal United States – and with the availability of more atmospheric moisture in the future under global warming we expect ARs to play an important role as potential causes of extreme precipitation changes. Therefore, we aim to investigate changes in extreme precipitation properties correlated with AR events in a warmer climate, which are large-scale meteorological patterns affecting the weather and climate of California. We have recently developed the TECA (Toolkit for Extreme Climatemore » Analysis) software for automatically identifying and tracking features in climate data sets. Specifically, we can now identify ARs that make landfall on the western coast of North America. Based on this detection procedure, we can investigate the impact of ARs by exploring the spatial extent of AR precipitation using climate model (CMIP5) simulations and characterize spatial patterns of dependence for future projections between AR precipitation extremes under climate change within the statistical framework. Our results show that AR events in the future RCP (Representative Concentration Pathway)8.5 scenario (2076–2100) tend to produce heavier rainfall with higher frequency and longer days than events from the historical run (1981–2005). We also find that the dependence between extreme precipitation events has a shorter spatial range, within localized areas in California, under the high future emissions scenario than under the historical run.« less

  17. Characterization of extreme precipitation within atmospheric river events over California

    DOE PAGES

    Jeon, S.; Prabhat,; Byna, S.; ...

    2015-11-17

    Atmospheric rivers (ARs) are large, spatially coherent weather systems with high concentrations of elevated water vapor. These systems often cause severe downpours and flooding over the western coastal United States – and with the availability of more atmospheric moisture in the future under global warming we expect ARs to play an important role as potential causes of extreme precipitation changes. Therefore, we aim to investigate changes in extreme precipitation properties correlated with AR events in a warmer climate, which are large-scale meteorological patterns affecting the weather and climate of California. We have recently developed the TECA (Toolkit for Extreme Climatemore » Analysis) software for automatically identifying and tracking features in climate data sets. Specifically, we can now identify ARs that make landfall on the western coast of North America. Based on this detection procedure, we can investigate the impact of ARs by exploring the spatial extent of AR precipitation using climate model (CMIP5) simulations and characterize spatial patterns of dependence for future projections between AR precipitation extremes under climate change within the statistical framework. Our results show that AR events in the future RCP (Representative Concentration Pathway)8.5 scenario (2076–2100) tend to produce heavier rainfall with higher frequency and longer days than events from the historical run (1981–2005). We also find that the dependence between extreme precipitation events has a shorter spatial range, within localized areas in California, under the high future emissions scenario than under the historical run.« less

  18. Coprecipitation of thermal lysine-rich proteinoids with polyribonucleotides

    NASA Technical Reports Server (NTRS)

    Lacey, J. C., Jr.; Yuki, A.; Fox, S. W.

    1979-01-01

    An experimental study was conducted to determine whether the precipitation of thermal proteinoids with homopolynucleotides can serve as a tool for studying the specificities between proteins and polynucleotides. Attention is given to exploring the best means of quantitation of the precipitate and the effect of varying the lysine content and the amount of Mg(2+) on the results. The formation of microparticles was monitored both by turbidity and by the mass of precipitate formed. Only under certain conditions was the turbidity a reliable indication of the amount of precipitate. Increasing concentration of Mg(2+) tended to displace proteinoid from the complex with polynucleotide. The results indicate that the interaction of thermal proteinoids with polynucleotides appears to be a suitable tool for studying specificities of interactions between proteins and nucleic acids.

  19. A statistical intercomparison between "urban" and "rural" precipitation chemistry data from greater Manchester and two nearby secondary national network sites in the United Kingdom

    NASA Astrophysics Data System (ADS)

    Lee, David S.; Longhurst, James W. S.

    Precipitation chemistry data from a dense urban monitoring network in Greater Manchester, northwest England, were compared with interpolated values from the U.K. secondary national acid deposition monitoring network for the year 1988. Differences were found to be small. However, when data from individual sites from the Greater Manchester network were compared with data from the two nearest secondary national network sites, significant differences were found using simple and complex statistical analyses. Precipitation chemistry at rural sites could be similar to that at urban sites, but the sources of some ions were thought to be different. The synoptic-scale gradients of precipitation chemistry, as shown by the secondary national network, also accounted for some of the differences.

  20. Analysis of the historical precipitation in the South East Iberian Peninsula at different spatio-temporal scale. Study of the meteorological drought

    NASA Astrophysics Data System (ADS)

    Fernández-Chacón, Francisca; Pulido-Velazquez, David; Jiménez-Sánchez, Jorge; Luque-Espinar, Juan Antonio

    2017-04-01

    Precipitation is a fundamental climate variable that has a pronounced spatial and temporal variability on a global scale, as well as at regional and sub-regional scales. Due to its orographic complexity and its latitude the Iberian Peninsula (IP), located to the west of the Mediterranean Basin between the Atlantic Ocean and the Mediterranean Sea, has a complex climate. Over the peninsula there are strong north-south and east-west gradients, as a consequence of the different low-frequency atmospheric patterns, and he overlap of these over the year will be determinants in the variability of climatic variables. In the southeast of the Iberian Peninsula dominates a dry Mediterranean climate, the precipitation is characterized as being an intermittent and discontinuous variable. In this research information coming from the Spain02 v4 database was used to study the South East (SE) IP for the 1971-2010 period with a spatial resolution of 0.11 x 0.11. We analysed precipitation at different time scale (daily, monthly, seasonal, annual,…) to study the spatial distribution and temporal tendencies. The high spatial, intra-annual and inter-annual climatic variability observed makes it necessary to propose a climatic regionalization. In addition, for the identified areas and subareas of homogeneous climate we have analysed the evolution of the meteorological drought for the same period at different time scales. The standardized precipitation index has been used at 12, 24 and 48 month temporal scale. The climatic complexity of the area determines a high variability in the drought characteristics, duration, intensity and frequency in the different climatic areas. This research has been supported by the GESINHIMPADAPT project (CGL2013-48424-C2-2-R) with Spanish MINECO funds. We would also like to thank Spain02 project for the data provided for this study.

  1. Mineralogy controls on reactive transport of Marcellus Shale waters.

    PubMed

    Cai, Zhang; Wen, Hang; Komarneni, Sridhar; Li, Li

    2018-07-15

    Produced or flowback waters from Marcellus Shale gas extraction (MSWs) typically are highly saline and contain chemicals including trace metals, which pose significant concerns on water quality. The natural attenuation of MSW chemicals in groundwater is poorly understood due to the complex interactions between aquifer minerals and MSWs, limiting our capabilities to monitor and predict. Here we combine flow-through experiments and process-based reactive transport modeling to understand mechanisms and quantify the retention of MSW chemicals in a quartz (Qtz) column, a calcite-rich (Cal) column, and a clay-rich (Vrm, vermiculite) column. These columns were used to represent sand, carbonate, and clay-rich aquifers. Results show that the types and extent of water-rock interactions differ significantly across columns. Although it is generally known that clay-rich media retard chemicals and that quartz media minimize water-rock interactions, results here have revealed insights that differ from previous thoughts. We found that the reaction mechanisms are much more complex than merely sorption and mineral precipitation. In clay rich media, trace metals participate in both ion exchange and mineral precipitation. In fact, the majority of metals (~50-90%) is retained in the solid via mineral precipitation, which is surprising because we typically expect the dominance of sorption in clay-rich aquifers. In the Cal column, trace metals are retained not only through precipitation but also solid solution partitioning, leading to a total of 75-99% retention. Even in the Qtz column, trace metals are retained at unexpectedly high percentages (~20-70%) due to precipitation. The reactive transport model developed here quantitatively differentiates the relative importance of individual processes, and bridges a limited number of experiments to a wide range of natural conditions. This is particularly useful where relatively limited knowledge and data prevent the prediction of complex rock-contaminant interactions and natural attenuation. Copyright © 2018 Elsevier B.V. All rights reserved.

  2. Molecular architecture and function of the SEA complex, a modulator of the TORC1 pathway.

    PubMed

    Algret, Romain; Fernandez-Martinez, Javier; Shi, Yi; Kim, Seung Joong; Pellarin, Riccardo; Cimermancic, Peter; Cochet, Emilie; Sali, Andrej; Chait, Brian T; Rout, Michael P; Dokudovskaya, Svetlana

    2014-11-01

    The TORC1 signaling pathway plays a major role in the control of cell growth and response to stress. Here we demonstrate that the SEA complex physically interacts with TORC1 and is an important regulator of its activity. During nitrogen starvation, deletions of SEA complex components lead to Tor1 kinase delocalization, defects in autophagy, and vacuolar fragmentation. TORC1 inactivation, via nitrogen deprivation or rapamycin treatment, changes cellular levels of SEA complex members. We used affinity purification and chemical cross-linking to generate the data for an integrative structure modeling approach, which produced a well-defined molecular architecture of the SEA complex and showed that the SEA complex comprises two regions that are structurally and functionally distinct. The SEA complex emerges as a platform that can coordinate both structural and enzymatic activities necessary for the effective functioning of the TORC1 pathway. © 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

  3. Passive Microwave Precipitation Retrieval Uncertainty Characterized based on Field Campaign Data over Complex Terrain

    NASA Astrophysics Data System (ADS)

    Derin, Y.; Anagnostou, E. N.; Anagnostou, M.; Kalogiros, J. A.; Casella, D.; Marra, A. C.; Panegrossi, G.; Sanò, P.

    2017-12-01

    Difficulties in representation of high rainfall variability over mountainous areas using ground based sensors make satellite remote sensing techniques attractive for hydrologic studies over these regions. Even though satellite-based rainfall measurements are quasi global and available at high spatial resolution, these products have uncertainties that necessitate use of error characterization and correction procedures based upon more accurate in situ rainfall measurements. Such measurements can be obtained from field campaigns facilitated by research quality sensors such as locally deployed weather radar and in situ weather stations. This study uses such high quality and resolution rainfall estimates derived from dual-polarization X-band radar (XPOL) observations from three field experiments in Mid-Atlantic US East Coast (NASA IPHEX experiment), the Olympic Peninsula of Washington State (NASA OLYMPEX experiment), and the Mediterranean to characterize the error characteristics of multiple passive microwave (PMW) sensor retrievals. The study first conducts an independent error analysis of the XPOL radar reference rainfall fields against in situ rain gauges and disdrometer observations available by the field experiments. Then the study evaluates different PMW precipitation products using the XPOL datasets (GR) over the three aforementioned complex terrain study areas. We extracted matchups of PMW/GR rainfall based on a matching methodology that identifies GR volume scans coincident with PMW field-of-view sampling volumes, and scaled GR parameters to the satellite products' nominal spatial resolution. The following PMW precipitation retrieval algorithms are evaluated: the NASA Goddard PROFiling algorithm (GPROF), standard and climatology-based products (V 3, 4 and 5) from four PMW sensors (SSMIS, MHS, GMI, and AMSR2), and the precipitation products based on the algorithms Cloud Dynamics and Radiation Database (CDRD) for SSMIS and Passive microwave Neural network Precipitation Retrieval (PNPR) for AMSU/MHS, developed at ISAC-CNR within the EUMETSAT H-SAF. We will present error analysis results for the different PMW rainfall retrievals and discuss dependences on precipitation type, elevation and precipitation microphysics (derived from XPOL).

  4. Effects of watershed topography, soils, land use and climate on baseflow hydrology in humid regions: a review

    Treesearch

    Katie Price

    2011-01-01

    Baseflow is the portion of streamflow that is sustained between precipitation events, fed to stream channels by delayed (usually subsurface) pathways. Understanding baseflow processes is critical to issues of water quality, supply, and habitat. This review synthesizes the body of global literature investigating relationships between baseflow and watershed...

  5. Constraining Aerosol-Cloud-Precipitation Interactions of Orographic Mixed-Phase Clouds with Trajectory Budgets

    NASA Astrophysics Data System (ADS)

    Glassmeier, F.; Lohmann, U.

    2016-12-01

    Orographic precipitation is prone to strong aerosol-cloud-precipitation interactions because the time for precipitation development is limited to the ascending section of mountain flow. At the same time, cloud microphysical development is constraint by the strong dynamical forcing of the orography. In this contribution, we discuss how changes in the amount and composition of droplet- and ice-forming aerosols influence precipitation in idealized simulations of stratiform orographic mixed-phase clouds. We find that aerosol perturbations trigger compensating responses of different precipitation formation pathways. The effect of aerosols is thus buffered. We explain this buffering by the requirement to fulfill aerosol-independent dynamical constraints. For our simulations, we use the regional atmospheric model COSMO-ART-M7 in a 2D setup with a bell-shaped mountain. The model is coupled to a 2-moment warm and cold cloud microphysics scheme. Activation and freezing rates are parameterized based on prescribed aerosol fields that are varied in number, size and composition. Our analysis is based on the budget of droplet water along trajectories of cloud parcels. The budget equates condensation as source term with precipitation formation from autoconversion, accretion, riming and the Wegener-Bergeron-Findeisen process as sink terms. Condensation, and consequently precipitation formation, is determined by dynamics and largely independent of the aerosol conditions. An aerosol-induced change in the number of droplets or crystals perturbs the droplet budget by affecting precipitation formation processes. We observe that this perturbation triggers adjustments in liquid and ice water content that re-equilibrate the budget. As an example, an increase in crystal number triggers a stronger glaciation of the cloud and redistributes precipitation formation from collision-coalescence to riming and from riming to vapor deposition. We theoretically confirm the dominant effect of water content adjustments over number changes by estimating susceptibilities d ln P / d ln N of precipitation formation P to droplet or crystal number N from the budget equation. The susceptibility analysis also reveals that aerosol perturbations to droplet and crystal number compensate each other.

  6. Predicting mineral precipitation in fractures: The influence of local heterogeneity on the feedback between precipitation and permeability

    NASA Astrophysics Data System (ADS)

    Jones, T.; Detwiler, R. L.

    2016-12-01

    Long-term subsurface energy production and contaminant storage strategies often rely on induced-mineralization to control the transport of dissolved ions. In low-permeability rocks, precipitation is most likely to occur in fractures that act as leakage pathways for fluids that are in chemical disequilibrium with the formation minerals. These fractures are commonly idealized as parallel-plate channels with uniform surface mineralogy, and as a result, our predictions often suggest that precipitation leads to fast permeability reduction. However, natural fractures contain both heterogeneous mineralogy and three-dimensional surface roughness, and our understanding of how precipitation affects local permeability in these environments is limited. To examine the impacts of local heterogeneity on the feedback between mineral precipitation and permeability, we performed two long-term experiments in transparent analog fractures: (i) uniform-aperture and (ii) variable-aperture. We controlled the initial heterogeneous surface mineralogy in both experiments by seeding the bottom borosilicate fracture surfaces with randomly distributed clusters of CaCO3 crystals. Continuous flow ISCO pumps injected a well-mixed CaCl2-NaHCO3 solution, log(ΩCaCO3) = 1.44, into the fracture at 0.5 ml/min and transmitted-light techniques provided high-resolution (83 x 83 µm), direct measurements of aperture and fluid transport across the fracture. In experiment (i), precipitation decreased local aperture at discrete CaCO3 reaction sites near the fracture inlet, but transport variations across the fracture remained relatively small due to the initial lack of aperture heterogeneity. In contrast, the feedback between precipitation and aperture in experiment (ii) focused flow into large-aperture, preferential flow paths that contained significantly less CaCO3 area than the fracture scale average. Precipitation-induced aperture reduction in (ii) reduced dissolved ion transport into small-aperture regions of the fracture that were abundant with CaCO3 and led to a 72% decrease in measured precipitation rate. These results suggest that incorporating the effects of local heterogeneity may dramatically improve our ability to predict precipitation-induced permeability alterations in fractured rocks.

  7. Enhanced photophysics of conjugated polymers

    DOEpatents

    Chen, Liaohai [Argonne, IL; Xu, Su [Santa Clara, CA; McBranch, Duncan [Santa Fe, NM; Whitten, David [Santa Fe, NM

    2003-05-27

    The addition of oppositely charged surfactant to fluorescent ionic conjugated polymer forms a polymer-surfactant complex that exhibits at least one improved photophysical property. The conjugated polymer is a fluorescent ionic polymer that typically has at least one ionic side chain or moiety that interacts with the specific surfactant selected. The photophysical property improvements may include increased fluorescence quantum efficiency, wavelength-independent emission and absorption spectra, and more stable fluorescence decay kinetics. The complexation typically occurs in a solution of a polar solvent in which the polymer and surfactant are soluble, but it may also occur in a mixture of solvents. The solution is commonly prepared with a surfactant molecule:monomer repeat unit of polymer ratio ranging from about 1:100 to about 1:1. A polymer-surfactant complex precipitate is formed as the ratio approaches 1:1. This precipitate is recoverable and usable in many forms.

  8. Integrating a geographic information system, a scientific visualization system and an orographic precipitation model

    USGS Publications Warehouse

    Hay, L.; Knapp, L.

    1996-01-01

    Investigating natural, potential, and man-induced impacts on hydrological systems commonly requires complex modelling with overlapping data requirements, and massive amounts of one- to four-dimensional data at multiple scales and formats. Given the complexity of most hydrological studies, the requisite software infrastructure must incorporate many components including simulation modelling, spatial analysis and flexible, intuitive displays. There is a general requirement for a set of capabilities to support scientific analysis which, at this time, can only come from an integration of several software components. Integration of geographic information systems (GISs) and scientific visualization systems (SVSs) is a powerful technique for developing and analysing complex models. This paper describes the integration of an orographic precipitation model, a GIS and a SVS. The combination of these individual components provides a robust infrastructure which allows the scientist to work with the full dimensionality of the data and to examine the data in a more intuitive manner.

  9. The Convective and Orographically Induced Precipitation Study (COPS): The Scientific Strategy, the Field Phase, and Research Highlights

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wulfmeyer, Volker; Behrendt, Andreas; Kottmeir, Christoph

    2011-02-24

    Within the frame of the international field campaign COPS (Convective and Orographically-induced Precipitation Study), a large suite of state-of-the-art meteorological instrumentation was operated, partially combined for the first time. The COPS field phase was performed from 01 June - 31 August 2007 in a low-mountain area in southwestern Germany/eastern France covering the Vosges Mountains, the Rhine valley and the Black Forest Mountains. The collected data set covers the entire evolution of convective precipitation events in complex terrain from their initiation, to their development and mature phase up to their decay. 18 Intensive Operation Periods (IOPs) with 34 operation days andmore » 8 additional Special Observation Periods (SOPs) were performed providing a comprehensive data set covering different forcing conditions. In this paper an overview of the COPS scientific strategy, the field phase, and its first accomplishments is given. Some highlights of the campaign are illustrated with several measurement examples. It is demonstrated that COPS provided new insight in key processes leading to convection initiation and to the modification of precipitation by orography, in the improvement of QPF by the assimilation of new observations, and in the performance of ensembles of convection permitting models in complex terrain.« less

  10. Land-Climate Feedbacks in Indian Summer Monsoon Rainfall

    NASA Astrophysics Data System (ADS)

    Asharaf, Shakeel; Ahrens, Bodo

    2016-04-01

    In an attempt to identify how land surface states such as soil moisture influence the monsoonal precipitation climate over India, a series of numerical simulations including soil moisture sensitivity experiments was performed. The simulations were conducted with a nonhydrostatic regional climate model (RCM), the Consortium for Small-Scale Modeling (COSMO) in climate mode (CCLM) model, which was driven by the European Center for Medium-Range Weather Forecasts (ECMWF) Interim reanalysis (ERA-Interim) data. Results showed that pre-monsoonal soil moisture has a significant impact on monsoonal precipitation formation and large-scale atmospheric circulations. The analysis revealed that even a small change in the processes that influence precipitation via changes in local evapotranspiration was able to trigger significant variations in regional soil moisture-precipitation feedback. It was observed that these processes varied spatially from humid to arid regions in India, which further motivated an examination of soil-moisture memory variation over these regions and determination of the ISM seasonal forecasting potential. A quantitative analysis indicated that the simulated soil-moisture memory lengths increased with soil depth and were longer in the western region than those in the eastern region of India. Additionally, the subsequent precipitation variance explained by soil moisture increased from east to west. The ISM rainfall was further analyzed in two different greenhouse gas emission scenarios: the Special Report on Emissions Scenario (SRES: B1) and the new Representative Concentration Pathways (RCPs: RCP4.5). To that end, the CCLM and its driving global-coupled atmospheric-oceanic model (GCM), ECHAM/MPIOM were used in order to understand the driving processes of the projected inter-annual precipitation variability and associated trends. Results inferred that the projected rainfall changes were the result of two largely compensating processes: increase of remotely induced precipitation and decrease of precipitation efficiency. However, the complementing precipitation components and their simulation uncertainties rendered climate projections of the Indian summer monsoon rainfall as an ongoing, highly ambiguous challenge for both the GCM and the RCM.

  11. Weak hydrological sensitivity to temperature change over land, independent of climate forcing

    NASA Astrophysics Data System (ADS)

    Samset, Bjorn H.

    2017-04-01

    As the global surface temperature changes, so will patterns and rates of precipitation. Theoretically, these changes can be understood in terms of changes to the energy balance of the atmosphere, caused by introducing drivers of climate change such as greenhouse gases, aerosols and altered insolation. Climate models, however, disagree strongly in their prediction of precipitation changes, both for historical and future emission pathways, and per degree of surface warming in idealized experiments. The latter value, often termed the apparent hydrological sensitivity, has also been found to differ substantially between climate drivers. Here, we present the global and regional hydrological sensitivity (HS) to surface temperature changes, for perturbations to CO2, CH4, sulfate and black carbon concentrations, and solar irradiance. Based on results from 10 climate models participating in the Precipitation Driver and Response Model Intercomparison Project (PDRMIP), we show how modeled global mean precipitation increases by 2-3 % per kelvin of global mean surface warming, independent of driver, when the effects of rapid adjustments are removed. Previously reported differences in response between drivers are therefore mainly ascribable to rapid atmospheric adjustment processes. All models show a sharp contrast in behavior over land and over ocean, with a strong surface temperature driven (slow) ocean HS of 3-5 %/K, while the slow land HS is only 0-2 %/K. Separating the response into convective and large-scale cloud processes, we find larger inter-model differences, in particular over land regions. Large-scale precipitation changes are most relevant at high latitudes, while the equatorial HS is dominated by convective precipitation changes. Black carbon stands out as the driver with the largest inter-model slow HS variability, and also the strongest contrast between a weak land and strong sea response. Convective precipitation in the Arctic and large scale precipitation around the Equator are found to be topics where further model investigations and observational constraints may provide rapid improvements to modelling of the precipitation response to future, CO2 dominated climate change.

  12. Edouard's (2014) Intensification: An Investigation of Precipitation and Thermodynamic Symmetrization Using a Cloud-Resolving Ensemble

    NASA Astrophysics Data System (ADS)

    Alvey, G., III; Zipser, E. J.

    2017-12-01

    Literature over the past 10 years has provided conflicting views about the relative importance of precipitation symmetry and convective intensity for tropical cyclone intensification. While several modeling studies (Braun et al. 2006, Guimond et al. 2010, Molinari et al. 2013, Rogers et al. 2013, 2015) have favored intense deep convection, satellite-based composite studies, on the other hand, have offered a differing pathway towards tropical cyclone intensification emphasizing shallow to moderate precipitation (Zagrodnik and Jiang 2014, Tao and Jiang 2015, Alvey et al. 2015). This has left fundamental questions unanswered regarding the relationships between precipitation and TC intensity change: What are the dominant precipitation types, their spatial distributions, and the timing of these features with respect to intensification? And what causes precipitation to symmetrize and increase in the upshear quadrants? One potentially important process, the humidification of upshear quadrants, has been identified to occur nearly coincidental with increased precipitation symmetry prior to and during Edouard's (2014) intensification (Zawislak et al. 2016). While observations from the Global Hawk and P-3 provided important snapshots throughout the life cycle of Edouard (2014), numerical simulations complement and reveal, in more detail, the processes behind these relationships through filling an 48-hour airborne observational gap during a crucial period of intensification between 12-14 Sept. We use a high resolution, full physics ensemble of Edouard (2014) simulated by the Weather Research and Forecasting (WRF) model - Advanced Research WRF (ARW; Skamarock et al., 2008). We deem the quantification of azimuthal variations — with a focus on the shear-relative quadrants — as particularly important, especially early in intensification when thermodynamic and precipitation distributions tend to be more asymmetric. Using a water vapor budget and trajectories we examine whether precipitation is responsible for upshear humidification (moistening), or if an increase is due to advection from the environment, or simply a result of alignment (perhaps due to a decrease in vertical shear).

  13. Future efficiency of run of the river hydropower schemes based on climate change scenarios: case study in UK catchments

    NASA Astrophysics Data System (ADS)

    Pasten Zapata, Ernesto; Moggridge, Helen; Jones, Julie; Widmann, Martin

    2017-04-01

    Run-of-the-River (ROR) hydropower schemes are expected to be importantly affected by climate change as they rely in the availability of river flow to generate energy. As temperature and precipitation are expected to vary in the future, the hydrological cycle will also undergo changes. Therefore, climate models based on complex physical atmospheric interactions have been developed to simulate future climate scenarios considering the atmosphere's greenhouse gas concentrations. These scenarios are classified according to the Representative Concentration Pathways (RCP) that are generated according to the concentration of greenhouse gases. This study evaluates possible scenarios for selected ROR hydropower schemes within the UK, considering three different RCPs: 2.6, 4.5 and 8.5 W/m2 for 2100 relative to pre-industrial values. The study sites cover different climate, land cover, topographic and hydropower scheme characteristics representative of the UK's heterogeneity. Precipitation and temperature outputs from state-of-the-art Regional Climate Models (RCMs) from the Euro-CORDEX project are used as input for a HEC-HMS hydrological model to simulate the future river flow available. Both uncorrected and bias-corrected RCM simulations are analyzed. The results of this project provide an insight of the possible effects of climate change towards the generation of power from the ROR hydropower schemes according to the different RCP scenarios and contrasts the results obtained from uncorrected and bias-corrected RCMs. This analysis can aid on the adaptation to climate change as well as the planning of future ROR schemes in the region.

  14. Observed changes in extreme precipitation in Poland: 1991-2015 versus 1961-1990

    NASA Astrophysics Data System (ADS)

    Pińskwar, Iwona; Choryński, Adam; Graczyk, Dariusz; Kundzewicz, Zbigniew W.

    2018-01-01

    Several episodes of extreme precipitation excess and extreme precipitation deficit, with considerable economic and social impacts, have occurred in Europe and in Poland in the last decades. However, the changes of related indices exhibit complex variability. This paper analyses changes in indices related to observed abundance and deficit of precipitated water in Poland. Among studied indices are maximum seasonal 24-h precipitation for the winter half-year (Oct.-March) and the summer half-year (Apr.-Sept.), maximum 5-day precipitation, maximum monthly precipitation and number of days with intense or very intense precipitation (respectively, in excess of 10 mm or 20 mm per day). Also, the warm-seasonal maximum number of consecutive dry days (longest period with daily precipitation below 1 mm) was examined. Analysis of precipitation extremes showed that daily maximum precipitation for the summer half-year increased for many stations, and increases during the summer half-year are more numerous than those in the winter half-year. Also, analysis of 5-day and monthly precipitation sums show increases for many stations. Number of days with intense precipitation increases especially in the north-western part of Poland. The number of consecutive dry days is getting higher for many stations in the summer half-year. Comparison of these two periods: colder 1961-1990 and warmer 1991-2015, revealed that during last 25 years most of statistical indices, such as 25th and 75th percentiles, median, mean and maximum are higher. However, many changes discussed in this paper are weak and statistically insignificant. The findings reported in this paper challenge results based on earlier data that do not include 2007-2015.

  15. A Review of Global Precipitation Data Sets: Data Sources, Estimation, and Intercomparisons

    NASA Astrophysics Data System (ADS)

    Sun, Qiaohong; Miao, Chiyuan; Duan, Qingyun; Ashouri, Hamed; Sorooshian, Soroosh; Hsu, Kuo-Lin

    2018-03-01

    In this paper, we present a comprehensive review of the data sources and estimation methods of 30 currently available global precipitation data sets, including gauge-based, satellite-related, and reanalysis data sets. We analyzed the discrepancies between the data sets from daily to annual timescales and found large differences in both the magnitude and the variability of precipitation estimates. The magnitude of annual precipitation estimates over global land deviated by as much as 300 mm/yr among the products. Reanalysis data sets had a larger degree of variability than the other types of data sets. The degree of variability in precipitation estimates also varied by region. Large differences in annual and seasonal estimates were found in tropical oceans, complex mountain areas, northern Africa, and some high-latitude regions. Overall, the variability associated with extreme precipitation estimates was slightly greater at lower latitudes than at higher latitudes. The reliability of precipitation data sets is mainly limited by the number and spatial coverage of surface stations, the satellite algorithms, and the data assimilation models. The inconsistencies described limit the capability of the products for climate monitoring, attribution, and model validation.

  16. Selective Precipitation and Purification of Monovalent Proteins Using Oligovalent Ligands and Ammonium Sulfate

    PubMed Central

    Mirica, Katherine A.; Lockett, Matthew R.; Snyder, Phillip W.; Shapiro, Nathan D.; Mack, Eric T.; Nam, Sarah; Whitesides, George M.

    2012-01-01

    This paper describes a method for the selective precipitation and purification of a monovalent protein (carbonic anhydrase is used as a demonstration) from cellular lysate using ammonium sulfate and oligovalent ligands. The oligovalent ligands induce the formation of protein-ligand aggregates, and at an appropriate concentration of dissolved ammonium sulfate, these complexes precipitate. The purification involves three steps: i) the removal of high-molecular weight impurities through the addition of ammonium sulfate to the crude cell lysate; ii) the introduction of an oligovalent ligand and the selective precipitation of the target protein-ligand aggregates from solution; and iii) the removal of the oligovalent ligand from the precipitate by dialysis to release the target protein. The increase of mass and volume of the proteins upon aggregate formation reduces their solubility, and results in the selective precipitation of these aggregates. We recovered human carbonic anhydrase, from crude cellular lysate, in 82% yield and 95% purity with a trivalent benzene sulfonamide ligand. This method provides a chromatography-free strategy of purifying monovalent proteins—for which appropriate oligovalent ligands can be synthesized—and combines the selectivity of affinity-based purification with the convenience of salt-induced precipitation. PMID:22188202

  17. Selective precipitation and purification of monovalent proteins using oligovalent ligands and ammonium sulfate.

    PubMed

    Mirica, Katherine A; Lockett, Matthew R; Snyder, Phillip W; Shapiro, Nathan D; Mack, Eric T; Nam, Sarah; Whitesides, George M

    2012-02-15

    This paper describes a method for the selective precipitation and purification of a monovalent protein (carbonic anhydrase is used as a demonstration) from cellular lysate using ammonium sulfate and oligovalent ligands. The oligovalent ligands induce the formation of protein-ligand aggregates, and at an appropriate concentration of dissolved ammonium sulfate, these complexes precipitate. The purification involves three steps: (i) the removal of high-molecular-weight impurities through the addition of ammonium sulfate to the crude cell lysate; (ii) the introduction of an oligovalent ligand and the selective precipitation of the target protein-ligand aggregates from solution; and (iii) the removal of the oligovalent ligand from the precipitate by dialysis to release the target protein. The increase of mass and volume of the proteins upon aggregate formation reduces their solubility, and results in the selective precipitation of these aggregates. We recovered human carbonic anhydrase, from crude cellular lysate, in 82% yield and 95% purity with a trivalent benzene sulfonamide ligand. This method provides a chromatography-free strategy of purifying monovalent proteins--for which appropriate oligovalent ligands can be synthesized--and combines the selectivity of affinity-based purification with the convenience of salt-induced precipitation.

  18. Polyphenol-rich pomegranate juice reduces IgE binding to cashew nut allergens.

    PubMed

    Li, Yichen; Mattison, Christopher P

    2018-03-01

    Food allergy negatively impacts quality of life and can be life-threatening. Cashew nuts can cause severe reactions in very small amounts, and they are included in a group of foods most commonly responsible for causing food allergy. Polyphenols and polyphenol-rich juices have been demonstrated to complex with peanut allergens. Here, the interaction between cashew nut allergens and polyphenol-rich juices is evaluated biochemically and immunologically. Various juices, including pomegranate (POM), blueberry (BB), and concord grape (CG) juices, were evaluated for polyphenol content and formation of polyphenol-cashew allergen complexes. Among the various juices studied, POM juice showed a greater capacity to form complexes with cashew proteins. Dynamic light scattering (DLS) demonstrated a sharp increase in cashew protein extract particle size to around 3580 nm, and fewer cashew proteins were resolved by electrophoresis after treatment with POM juice. Immunoassays demonstrated reduced IgG and IgE binding to cashew allergens due to allergen precipitation by POM juice. These observations support the formation of complexes between polyphenol and cashew proteins that can prevent antibody recognition of cashew allergens through allergen precipitation. POM juice treatment of cashew extract effectively reduces antibody binding through allergen precipitation, and these findings could be applied to the development of less allergenic cashew nut products and oral immunotherapy. Published 2017. This article is a U.S. Government work and is in the public domain in the USA. Published 2017. This article is a U.S. Government work and is in the public domain in the USA.

  19. Numerical investigations with WRF about atmospheric features leading to heavy precipitation and flood events over the Central Andes' complex topography

    NASA Astrophysics Data System (ADS)

    Zamuriano, Marcelo; Brönnimann, Stefan

    2017-04-01

    It's known that some extremes such as heavy rainfalls, flood events, heatwaves and droughts depend largely on the atmospheric circulation and local features. Bolivia is no exception and while the large scale dynamics over the Amazon has been largely investigated, the local features driven by the Andes Cordillera and the Altiplano is still poorly documented. New insights on the regional atmospheric dynamics preceding heavy precipitation and flood events over the complex topography of the Andes-Amazon interface are added through numerical investigations of several case events: flash flood episodes over La Paz city and the extreme 2014 flood in south-western Amazon basin. Large scale atmospheric water transport is dynamically downscaled in order to take into account the complex topography forcing and local features as modulators of these events. For this purpose, a series of high resolution numerical experiments with the WRF-ARW model is conducted using various global datasets and parameterizations. While several mechanisms have been suggested to explain the dynamics of these episodes, they have not been tested yet through numerical modelling experiments. The simulations captures realistically the local water transport and the terrain influence over atmospheric circulation, even though the precipitation intensity is in general unrealistic. Nevertheless, the results show that Dynamical Downscaling over the tropical Andes' complex terrain provides useful meteorological data for a variety of studies and contributes to a better understanding of physical processes involved in the configuration of these events.

  20. The eClinical Care Pathway Framework: a novel structure for creation of online complex clinical care pathways and its application in the management of sexually transmitted infections.

    PubMed

    Gibbs, Jo; Sutcliffe, Lorna J; Gkatzidou, Voula; Hone, Kate; Ashcroft, Richard E; Harding-Esch, Emma M; Lowndes, Catherine M; Sadiq, S Tariq; Sonnenberg, Pam; Estcourt, Claudia S

    2016-07-22

    Despite considerable international eHealth impetus, there is no guidance on the development of online clinical care pathways. Advances in diagnostics now enable self-testing with home diagnosis, to which comprehensive online clinical care could be linked, facilitating completely self-directed, remote care. We describe a new framework for developing complex online clinical care pathways and its application to clinical management of people with genital chlamydia infection, the commonest sexually transmitted infection (STI) in England. Using the existing evidence-base, guidelines and examples from contemporary clinical practice, we developed the eClinical Care Pathway Framework, a nine-step iterative process. Step 1: define the aims of the online pathway; Step 2: define the functional units; Step 3: draft the clinical consultation; Step 4: expert review; Step 5: cognitive testing; Step 6: user-centred interface testing; Step 7: specification development; Step 8: software testing, usability testing and further comprehension testing; Step 9: piloting. We then applied the Framework to create a chlamydia online clinical care pathway (Online Chlamydia Pathway). Use of the Framework elucidated content and structure of the care pathway and identified the need for significant changes in sequences of care (Traditional: history, diagnosis, information versus Online: diagnosis, information, history) and prescribing safety assessment. The Framework met the needs of complex STI management and enabled development of a multi-faceted, fully-automated consultation. The Framework provides a comprehensive structure on which complex online care pathways such as those needed for STI management, which involve clinical services, public health surveillance functions and third party (sexual partner) management, can be developed to meet national clinical and public health standards. The Online Chlamydia Pathway's standardised method of collecting data on demographics and sexual behaviour, with potential for interoperability with surveillance systems, could be a powerful tool for public health and clinical management.

  1. Influence of Chemical, Mechanical, and Transport Processes on Wellbore Leakage from Geologic CO2 Storage Reservoirs.

    PubMed

    Carroll, Susan A; Iyer, Jaisree; Walsh, Stuart D C

    2017-08-15

    Wells are considered to be high-risk pathways for fluid leakage from geologic CO 2 storage reservoirs, because breaches in this engineered system have the potential to connect the reservoir to groundwater resources and the atmosphere. Given these concerns, a few studies have assessed leakage risk by evaluating regulatory records, often self-reported, documenting leakage in gas fields. Leakage is thought to be governed largely by initial well-construction quality and the method of well abandonment. The geologic carbon storage community has raised further concerns because acidic fluids in the CO 2 storage reservoir, alkaline cement meant to isolate the reservoir fluids from the overlying strata, and steel casings in wells are inherently reactive systems. This is of particular concern for storage of CO 2 in depleted oil and gas reservoirs with numerous legacy wells engineered to variable standards. Research suggests that leakage risks are not as great as initially perceived because chemical and mechanical alteration of cement has the capacity to seal damaged zones. Our work centers on defining the coupled chemical and mechanical processes governing flow in damaged zones in wells. We have developed process-based models, constrained by experiments, to better understand and forecast leakage risk. Leakage pathways can be sealed by precipitation of carbonate minerals in the fractures and deformation of the reacted cement. High reactivity of cement hydroxides releases excess calcium that can precipitate as carbonate solids in the fracture network under low brine flow rates. If the flow is fast, then the brine remains undersaturated with respect to the solubility of calcium carbonate minerals, and zones depleted in calcium hydroxides, enriched in calcium carbonate precipitates, and made of amorphous silicates leached of original cement minerals are formed. Under confining pressure, the reacted cement is compressed, which reduces permeability and lowers leakage risks. The broader context of this paper is to use our experimentally calibrated chemical, mechanical, and transport model to illustrate when, where, and in what conditions fracture pathways seal in CO 2 storage wells, to reduce their risk to groundwater resources. We do this by defining the amount of cement and the time required to effectively seal the leakage pathways associated with peak and postinjection overpressures, within the context of oil and gas industry standards for leak detection, mitigation, and repairs. Our simulations suggest that for many damage scenarios chemical and mechanical processes lower leakage risk by reducing or sealing fracture pathways. Leakage risk would remain high in wells with a large amount of damage, modeled here as wide fracture apertures, where fast flowing fluids are too dilute for carbonate precipitation and subsurface stress does not compress the altered cement. Fracture sealing is more likely as reservoir pressures decrease during the postinjection phase where lower fluxes aid chemical alteration and mechanical deformation of cement. Our results hold promise for the development of mitigation framework to avoid impacting groundwater resources above any geologic CO 2 storage reservoir by correlating operational pressures and barrier lengths.

  2. Influence of Chemical, Mechanical, and Transport Processes on Wellbore Leakage from Geologic CO 2 Storage Reservoirs

    DOE PAGES

    Carroll, Susan A.; Iyer, Jaisree; Walsh, Stuart D. C.

    2017-07-25

    Wells are considered to be high-risk pathways for fluid leakage from geologic CO 2 storage reservoirs, because breaches in this engineered system have the potential to connect the reservoir to groundwater resources and the atmosphere. Given these concerns, a few studies have assessed leakage risk by evaluating regulatory records, often self-reported, documenting leakage in gas fields. Leakage is thought to be governed largely by initial well-construction quality and the method of well abandonment. The geologic carbon storage community has raised further concerns because acidic fluids in the CO 2 storage reservoir, alkaline cement meant to isolate the reservoir fluids frommore » the overlying strata, and steel casings in wells are inherently reactive systems. This is of particular concern for storage of CO 2 in depleted oil and gas reservoirs with numerous legacy wells engineered to variable standards. Research suggests that leakage risks are not as great as initially perceived because chemical and mechanical alteration of cement has the capacity to seal damaged zones. Our work centers on defining the coupled chemical and mechanical processes governing flow in damaged zones in wells. We have developed process-based models, constrained by experiments, to better understand and forecast leakage risk. Leakage pathways can be sealed by precipitation of carbonate minerals in the fractures and deformation of the reacted cement. High reactivity of cement hydroxides releases excess calcium that can precipitate as carbonate solids in the fracture network under low brine flow rates. If the flow is fast, then the brine remains undersaturated with respect to the solubility of calcium carbonate minerals, and zones depleted in calcium hydroxides, enriched in calcium carbonate precipitates, and made of amorphous silicates leached of original cement minerals are formed. Under confining pressure, the reacted cement is compressed, which reduces permeability and lowers leakage risks. The broader context of this paper is to use our experimentally calibrated chemical, mechanical, and transport model to illustrate when, where, and in what conditions fracture pathways seal in CO 2 storage wells, to reduce their risk to groundwater resources. We do this by defining the amount of cement and the time required to effectively seal the leakage pathways associated with peak and postinjection overpressures, within the context of oil and gas industry standards for leak detection, mitigation, and repairs. Our simulations suggest that for many damage scenarios chemical and mechanical processes lower leakage risk by reducing or sealing fracture pathways. Leakage risk would remain high in wells with a large amount of damage, modeled here as wide fracture apertures, where fast flowing fluids are too dilute for carbonate precipitation and subsurface stress does not compress the altered cement. Fracture sealing is more likely as reservoir pressures decrease during the postinjection phase where lower fluxes aid chemical alteration and mechanical deformation of cement. Our results hold promise for the development of mitigation framework to avoid impacting groundwater resources above any geologic CO 2 storage reservoir by correlating operational pressures and barrier lengths.« less

  3. Influence of Chemical, Mechanical, and Transport Processes on Wellbore Leakage from Geologic CO 2 Storage Reservoirs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carroll, Susan A.; Iyer, Jaisree; Walsh, Stuart D. C.

    Wells are considered to be high-risk pathways for fluid leakage from geologic CO 2 storage reservoirs, because breaches in this engineered system have the potential to connect the reservoir to groundwater resources and the atmosphere. Given these concerns, a few studies have assessed leakage risk by evaluating regulatory records, often self-reported, documenting leakage in gas fields. Leakage is thought to be governed largely by initial well-construction quality and the method of well abandonment. The geologic carbon storage community has raised further concerns because acidic fluids in the CO 2 storage reservoir, alkaline cement meant to isolate the reservoir fluids frommore » the overlying strata, and steel casings in wells are inherently reactive systems. This is of particular concern for storage of CO 2 in depleted oil and gas reservoirs with numerous legacy wells engineered to variable standards. Research suggests that leakage risks are not as great as initially perceived because chemical and mechanical alteration of cement has the capacity to seal damaged zones. Our work centers on defining the coupled chemical and mechanical processes governing flow in damaged zones in wells. We have developed process-based models, constrained by experiments, to better understand and forecast leakage risk. Leakage pathways can be sealed by precipitation of carbonate minerals in the fractures and deformation of the reacted cement. High reactivity of cement hydroxides releases excess calcium that can precipitate as carbonate solids in the fracture network under low brine flow rates. If the flow is fast, then the brine remains undersaturated with respect to the solubility of calcium carbonate minerals, and zones depleted in calcium hydroxides, enriched in calcium carbonate precipitates, and made of amorphous silicates leached of original cement minerals are formed. Under confining pressure, the reacted cement is compressed, which reduces permeability and lowers leakage risks. The broader context of this paper is to use our experimentally calibrated chemical, mechanical, and transport model to illustrate when, where, and in what conditions fracture pathways seal in CO 2 storage wells, to reduce their risk to groundwater resources. We do this by defining the amount of cement and the time required to effectively seal the leakage pathways associated with peak and postinjection overpressures, within the context of oil and gas industry standards for leak detection, mitigation, and repairs. Our simulations suggest that for many damage scenarios chemical and mechanical processes lower leakage risk by reducing or sealing fracture pathways. Leakage risk would remain high in wells with a large amount of damage, modeled here as wide fracture apertures, where fast flowing fluids are too dilute for carbonate precipitation and subsurface stress does not compress the altered cement. Fracture sealing is more likely as reservoir pressures decrease during the postinjection phase where lower fluxes aid chemical alteration and mechanical deformation of cement. Our results hold promise for the development of mitigation framework to avoid impacting groundwater resources above any geologic CO 2 storage reservoir by correlating operational pressures and barrier lengths.« less

  4. Concerted action of Nrf2-ARE pathway, MRN complex, HMGB1 and inflammatory cytokines - Implication in modification of radiation damage

    PubMed Central

    Anuranjani; Bala, Madhu

    2014-01-01

    Whole body exposure to low linear energy transfer (LET) ionizing radiations (IRs) damages vital intracellular bio-molecules leading to multiple cellular and tissue injuries as well as pathophysiologies such as inflammation, immunosuppression etc. Nearly 70% of damage is caused indirectly by radiolysis of intracellular water leading to formation of reactive oxygen species (ROS) and free radicals and producing a state of oxidative stress. The damage is also caused by direct ionization of biomolecules. The type of radiation injuries is dependent on the absorbed radiation dose. Sub-lethal IR dose produces more of DNA base damages, whereas higher doses produce more DNA single strand break (SSBs), and double strand breaks (DSBs). The Nrf2-ARE pathway is an important oxidative stress regulating pathway. The DNA DSBs repair regulated by MRN complex, immunomodulation and inflammation regulated by HMGB1 and various types of cytokines are some of the key pathways which interact with each other in a complex manner and modify the radiation response. Because the majority of radiation damage is via oxidative stress, it is essential to gain in depth understanding of the mechanisms of Nrf2-ARE pathway and understand its interactions with MRN complex, HMGB1 and cytokines to increase our understanding on the radiation responses. Such information is of tremendous help in development of medical radiation countermeasures, radioprotective drugs and therapeutics. Till date no approved and safe countermeasure is available for human use. This study reviews the Nrf2-ARE pathway and its crosstalk with MRN-complex, HMGB1 and cytokines (TNF-a, IL-6, IFN-? etc.). An attempt is also made to review the modification of some of these pathways in presence of selected antioxidant radioprotective compounds or herbal extracts. PMID:25009785

  5. From ENSEMBLES to CORDEX: exploring the progress for hydrological impact research for the upper Danube basin

    NASA Astrophysics Data System (ADS)

    Stanzel, Philipp; Kling, Harald

    2017-04-01

    EURO-CORDEX Regional Climate Model (RCM) data are available as result of the latest initiative of the climate modelling community to provide ever improved simulations of past and future climate in Europe. The spatial resolution of the climate models increased from 25 x 25 km in the previous coordinated initiative, ENSEMBLES, to 12 x 12 km in the CORDEX EUR-11 simulations. This higher spatial resolution might yield improved representation of the historic climate, especially in complex mountainous terrain, improving applicability in impact studies. CORDEX scenario simulations are based on Representative Concentration Pathways, while ENSEMBLES applied the SRES greenhouse gas emission scenarios. The new emission scenarios might lead to different projections of future climate. In this contribution we explore these two dimensions of development from ENSEMBLES to CORDEX - representation of the past and projections for the future - in the context of a hydrological climate change impact study for the Danube River. We replicated previous hydrological simulations that used ENSEMBLES data of 21 RCM simulations under SRES A1B emission scenario as meteorological input data (Kling et al. 2012), and now applied CORDEX EUR-11 data of 16 RCM simulations under RCP4.5 and RCP8.5 emission scenarios. The climate variables precipitation and temperature were used to drive a monthly hydrological model of the upper Danube basin upstream of Vienna (100,000 km2). RCM data was bias corrected and downscaled to the scale of hydrological model units. Results with CORDEX data were compared with results with ENSEMBLES data, analysing both the driving meteorological input and the resulting discharge projections. Results with CORDEX data show no general improvement in the accuracy of representing historic climatic features, despite the increase in spatial model resolution. The tendency of ENSEMBLES scenario projections of increasing precipitation in winter and decreasing precipitation in summer is reproduced with the CORDEX RCMs, albeit with slightly higher precipitation in the CORDEX data. The distinct pattern of future change in discharge seasonality - increasing winter discharge and decreasing summer discharge - is confirmed with the new CORDEX data, with a range of projections very similar to the range projected by the ENSEMBLES RCMs. References: Kling, H., Fuchs, M., Paulin, M. 2012. Runoff conditions in the upper Danube basin under an ensemble of climate change scenarios. Journal of Hydrology 424-425, 264-277.

  6. Effects of organic solutes on chemical reactions of aluminum

    USGS Publications Warehouse

    Lind, Carol J.; Hem, John David

    1975-01-01

    Concentrations of organic matter in the general range of 1-10 milligrams per litre organic carbon are common in natural water, and many naturally occurrin7 organic compounds form aluminum complexes. The aluminum concentrations in near-neutral pH solutions may be 10-100 times higher than the values predicted from solubility data if formation of such organic complexes is ignored. The processes of polymerization of aluminum hydroxide and precipitation of gibbsite are inhibited by the presence of the organic flavone compound quercetin in concentrations as low as 10 x -5.3 mole per litre. Quercetin forms a complex, with a probable molar ratio of 1:2 aluminum to quercetin, that has a formation constant (f12) of about 10 12. A complex with a higher aluminum-quercetin ratio also was observed, but this material tends to evolve into a compound of low solubility that removes aluminum from solution. In the presence of both dissolved aluminum and aqueous silica, low concentrations of quercetin improved the yield of crystallized kaolinite and halloysite. Small amounts of well-shaped kaolinite and halloysite crystals were identified by electron microscopy in solutions with pH's in the range 6.5-8.5 after 155 days aging in one experimer t and 481 days aging in a repeated experiment. The bulk of the precipitated material was amorphous to X-rays, and crystalline material was too small a proportion of the total to give identifiable X-ray diffraction peaks. The precipitates had aluminum-silicon ratios near 1, and their solubility corresponded to that found by Hem, Roberson, Lind, and Polzer (1973) for similar aluminosilicate precipitated in the absence of organic solutes. The improved yield of crystalline material obtained in the presence of quercetin probably is the result of the influence of the organic compound on the aluminum hydroxide polymerization process. Natural water containing color imparted by organic material tends to be higher in aluminum than would be predicted by pH, silica concentrations, and solubility data for inorganic aluminum species.

  7. Ammonia release method for depositing metal oxides

    DOEpatents

    Silver, Gary L.; Martin, Frank S.

    1994-12-13

    A method of depositing metal oxides on substrates which is indifferent to the electrochemical properties of the substrates and which comprises forming ammine complexes containing metal ions and thereafter effecting removal of ammonia from the ammine complexes so as to permit slow precipitation and deposition of metal oxide on the substrates.

  8. Non-Gaussian spatiotemporal simulation of multisite daily precipitation: downscaling framework

    NASA Astrophysics Data System (ADS)

    Ben Alaya, M. A.; Ouarda, T. B. M. J.; Chebana, F.

    2018-01-01

    Probabilistic regression approaches for downscaling daily precipitation are very useful. They provide the whole conditional distribution at each forecast step to better represent the temporal variability. The question addressed in this paper is: how to simulate spatiotemporal characteristics of multisite daily precipitation from probabilistic regression models? Recent publications point out the complexity of multisite properties of daily precipitation and highlight the need for using a non-Gaussian flexible tool. This work proposes a reasonable compromise between simplicity and flexibility avoiding model misspecification. A suitable nonparametric bootstrapping (NB) technique is adopted. A downscaling model which merges a vector generalized linear model (VGLM as a probabilistic regression tool) and the proposed bootstrapping technique is introduced to simulate realistic multisite precipitation series. The model is applied to data sets from the southern part of the province of Quebec, Canada. It is shown that the model is capable of reproducing both at-site properties and the spatial structure of daily precipitations. Results indicate the superiority of the proposed NB technique, over a multivariate autoregressive Gaussian framework (i.e. Gaussian copula).

  9. How consistent are precipitation patterns predicted by GCMs in the absence of cloud radiative effects?

    NASA Astrophysics Data System (ADS)

    Popke, Dagmar; Bony, Sandrine; Mauritsen, Thorsten; Stevens, Bjorn

    2015-04-01

    Model simulations with state-of-the-art general circulation models reveal a strong disagreement concerning the simulated regional precipitation patterns and their changes with warming. The deviating precipitation response even persists when reducing the model experiment complexity to aquaplanet simulation with forced sea surface temperatures (Stevens and Bony, 2013). To assess feedbacks between clouds and radiation on precipitation responses we analyze data from 5 models performing the aquaplanet simulations of the Clouds On Off Klima Intercomparison Experiment (COOKIE), where the interaction of clouds and radiation is inhibited. Although cloud radiative effects are then disabled, the precipitation patterns among models are as diverse as with cloud radiative effects switched on. Disentangling differing model responses in such simplified experiments thus appears to be key to better understanding the simulated regional precipitation in more standard configurations. By analyzing the local moisture and moist static energy budgets in the COOKIE experiments we investigate likely causes for the disagreement among models. References Stevens, B. & S. Bony: What Are Climate Models Missing?, Science, 2013, 340, 1053-1054

  10. Trends in precipitation and stream-water chemistry in the northeastern United States, water years 1984-96

    USGS Publications Warehouse

    Clow, D.W.; Mast, M. Alisa

    1999-01-01

    Trends in precipitation and stream-water chemistry during water years 1984-96 were examined at eight precipitation monitoring sites and five nearby streams operated by the U.S. Geological Survey in the northeastern United States. The statistical analyses indicate the following: 1)Stream-water sulfate (SO4) concentrations decreased at seven of eight precipitation monitoring sites and in each of five streams. 2)Calcium plus magnesium (Ca + Mg) concentrations decreased at seven of eight precipitation monitoring sites and in three of five streams. 3)Precipitation acidity decreased at five of eight precipitation monitoring sites, but alkalinity increased in only one stream. These results indicate that decreases in atmospheric deposition of SO4 have resulted in decreased precipitation acidity. The chemical response of stream water to changes in precipitation chemistry was complex. Decreases in stream-water SO4 concentrations generally matched decreases of precipitation SO4. In stream water, increases in alkalinity were uncommon because decreases in SO4 concentrations often were accompanied by decreases in Ca + Mg concentrations. The decreases in Ca + Mg concentrations might be related to depletion of base cations from soil caused by long-term exposure to acidic deposition. Increases in streamwater alkalinity might not occur until rates of acidic deposition are reduced to substantially less than the rate of cation resupply by weathering and atmospheric deposition. In areas where forests are aggrading, recovery of stream-water alkalinity will be delayed further because of the acidifying effect of biomass accumulation.

  11. Functional Connectivity of Precipitation Networks in the Brazilian Rainforest-Savanna Transition Zone

    NASA Astrophysics Data System (ADS)

    Adera, S.; Larsen, L.; Levy, M. C.; Thompson, S. E.

    2016-12-01

    In the Brazilian rainforest-savanna transition zone, vegetation change has the potential to significantly affect precipitation patterns. Deforestation, in particular, can affect precipitation patterns by increasing land surface albedo, increasing aerosol loading to the atmosphere, changing land surface roughness, and reducing transpiration. Understanding land surface-precipitation couplings in this region is important not only for sustaining Amazon and Cerrado ecosystems, but also for cattle ranching and agriculture, hydropower generation, and drinking water management. Simulations suggest complex, scale-dependent interactions between precipitation and land cover. For example, the size and distribution of deforested patches has been found to affect precipitation patterns. We take an empirical approach to ask: (1) what are the dominant spatial and temporal length scales of precipitation coupling in the Brazilian rainforest-savanna transition zone? (2) How do these length scales change over time? (3) How does the connectivity of precipitation change over time? The answers to these questions will help address fundamental questions about the impacts of deforestation on precipitation. We use rain gauge data from 1100 rain gauges intermittently covering the period 1980 - 2013, a period of intensive land cover change in the region. The dominant spatial and temporal length scales of precipitation coupling are resolved using transfer entropy, a metric from information theory. Connectivity of the emergent network of couplings is quantified using network statistics. Analyses using transfer entropy and network statistics reveal the spatial and temporal interdependencies of rainfall events occurring in different parts of the study domain.

  12. Distribution of fission products palladium, silver, cerium and cesium in the un-corroded areas of the locally corroded SiC layer of a neutron irradiated TRISO fuel particle

    DOE PAGES

    Wen, Haiming; van Rooyen, Isabella J.

    2017-04-14

    Here, detailed electron microscopy studies were performed to investigate the distribution and composition of fission products in the SiC layer of a tristructural isotropic coated particle exhibiting localized corrosion. Previous studies on this particle indicated that pure carbon areas in the SiC layer, resulting from localized corrosion of SiC by Pd, provide pathways for Ag, Cd and Cs migration. This study reveals the presence of Ag- and/or Cd-containing precipitates in un-corroded SiC areas. Ag/Cd may exist by themselves or coexist with Pd. Ag/Cd mainly transport along SiC grain boundaries. An Ag-Pd-Cd precipitate was identified at a stacking fault inside amore » SiC grain, suggesting that intragranular transport of Ag/Cd is possible. Ce is present with Pd or Pd-U in some precipitates >50 nm. U and Ce frequently coexist with each other, whereas Ag/Cd usually does not coexist with U or Ce. No Cs was detected in any precipitates in the areas examined.« less

  13. Effect of Phosphate on U(VI) Sorption to Montmorillonite: Ternary Complexation and Precipitation Barriers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Troyer, Lyndsay D.; Maillot, Fabien; Wang, Zheming

    Phosphate addition is a potential treatment method to lower the solubility of U(VI) in soil and groundwater systems by causing U(VI) phosphate precipitation as well as enhancing adsorption. Previous work has shown that iron oxide surfaces may facilitate the nucleation of U(VI) phosphate minerals and, that under weakly acidic conditions, phosphate also enhances U(VI) adsorption to such phases. Like iron oxides, clays are important reactive phases in the subsurface but little is known about the interaction of U(VI) and phosphate with these minerals. The effect of aqueous phosphate on U(VI) binding to Wyoming montmorillonite (SWy-2) in air-equilibrated systems was investigated.more » Equilibrium U(VI) uptake to montmorillonite was determined at pH 4, 6 and 8 at discrete initial phosphate concentrations between 0 and 100 μM. The observed behavior of U(VI) indicates a transition from adsorption to precipitation with increasing total uranium and phosphate concentrations at all pH values. At the highest phosphate concentration examined at each pH value, a barrier to U(VI) phosphate nucleation is observed. At lower concentrations, phosphate has no effect on macroscopic U(VI) adsorption. To assess the mechanisms of U(VI)-phosphate interactions on smectite surfaces, U(VI) speciation was investigated under selected conditions using laser-induced fluorescence spectroscopy (LIFS) and extended X-ray absorption fine-structure (EXAFS) spectroscopy. Samples above the precipitation threshold display EXAFS and LIFS spectral signatures consistent with the autunite family of U(VI) phosphate minerals. However, at lower U(VI) concentrations, changes in LIFS spectra upon phosphate addition suggest that U(VI)-phosphate ternary surface complexes form on the montmorillonite surface at pH 4 and 6 despite the lack of a macroscopic effect on adsorption. The speciation of solid-associated U(VI) below the precipitation threshold at pH 8 is dominated by U(VI)-carbonate surface complexes. This work reveals that ternary complexation may occur without a macroscopic signature, which is attributed to phosphate not appreciably binding to smectite in the absence of U(VI), with U(VI) surface complexes serving as the sole reactive surface sites for phosphate. This study shows that phosphate does not enhance U(VI) adsorption to smectite clay minerals, unlike oxide phases, and that a barrier to homogeneous nucleation of U(VI) phosphates was not affected by the presence of the smectite surface« less

  14. Decomposition pathways in age hardening of Ti-Al-N films

    NASA Astrophysics Data System (ADS)

    Rachbauer, R.; Massl, S.; Stergar, E.; Holec, D.; Kiener, D.; Keckes, J.; Patscheider, J.; Stiefel, M.; Leitner, H.; Mayrhofer, P. H.

    2011-07-01

    The ability to increase the thermal stability of protective coatings under work load gives rise to scientific and industrial interest in age hardening of complex nitride coating systems such as ceramic-like Ti1-xAlxN. However, the decomposition pathway of these systems from single-phase cubic to the thermodynamically stable binary nitrides (cubic TiN and wurtzite AlN), which are essential for age hardening, are not yet fully understood. In particular, the role of decomposition kinetics still requires more detailed investigation. In the present work, the combined effect of annealing time and temperature upon the nano-structural development of Ti0.46Al0.54N thin films is studied, with a thermal exposure of either 1 min or 120 min in 100 °C steps from 500 °C to 1400 °C. The impact of chemical changes at the atomic scale on the development of micro-strain and mechanical properties is studied by post-annealing investigations using X-ray diffraction, nanoindentation, 3D-atom probe tomography and high-resolution transmission electron microscopy. The results clearly demonstrate that the spinodal decomposition process, triggering the increase of micro-strain and hardness, although taking place throughout the entire volume, is enhanced at high diffusivity paths such as grain or column boundaries and followed within the grains. Ab initio calculations further show that the early stages of wurtzite AlN precipitation are connected with increased strain formation, which is in excellent agreement with experimental observations.

  15. Review of iron-free Fenton-like systems for activating H2O2 in advanced oxidation processes.

    PubMed

    Bokare, Alok D; Choi, Wonyong

    2014-06-30

    Iron-catalyzed hydrogen peroxide decomposition for in situ generation of hydroxyl radicals (HO(•)) has been extensively developed as advanced oxidation processes (AOPs) for environmental applications. A variety of catalytic iron species constituting metal salts (in Fe(2+) or Fe(3+) form), metal oxides (e.g., Fe2O3, Fe3O4), and zero-valent metal (Fe(0)) have been exploited for chemical (classical Fenton), photochemical (photo-Fenton) and electrochemical (electro-Fenton) degradation pathways. However, the requirement of strict acidic conditions to prevent iron precipitation still remains the bottleneck for iron-based AOPs. In this article, we present a thorough review of alternative non-iron Fenton catalysts and their reactivity towards hydrogen peroxide activation. Elements with multiple redox states (like chromium, cerium, copper, cobalt, manganese and ruthenium) all directly decompose H2O2 into HO(•) through conventional Fenton-like pathways. The in situ formation of H2O2 and decomposition into HO(•) can be also achieved using electron transfer mechanism in zero-valent aluminum/O2 system. Although these Fenton systems (except aluminum) work efficiently even at neutral pH, the H2O2 activation mechanism is very specific to the nature of the catalyst and critically depends on its composition. This review describes in detail the complex mechanisms and emphasizes on practical limitations influencing their environmental applications. Copyright © 2014 Elsevier B.V. All rights reserved.

  16. Inscuteable Regulates the Pins-Mud Spindle Orientation Pathway

    PubMed Central

    Mauser, Jonathon F.; Prehoda, Kenneth E.

    2012-01-01

    During asymmetric cell division, alignment of the mitotic spindle with the cell polarity axis ensures that the cleavage furrow separates fate determinants into distinct daughter cells. The protein Inscuteable (Insc) is thought to link cell polarity and spindle positioning in diverse systems by binding the polarity protein Bazooka (Baz; aka Par-3) and the spindle orienting protein Partner of Inscuteable (Pins; mPins or LGN in mammals). Here we investigate the mechanism of spindle orientation by the Insc-Pins complex. Previously, we defined two Pins spindle orientation pathways: a complex with Mushroom body defect (Mud; NuMA in mammals) is required for full activity, whereas binding to Discs large (Dlg) is sufficient for partial activity. In the current study, we have examined the role of Inscuteable in mediating downstream Pins-mediated spindle orientation pathways. We find that the Insc-Pins complex requires Gαi for partial activity and that the complex specifically recruits Dlg but not Mud. In vitro competition experiments revealed that Insc and Mud compete for binding to the Pins TPR motifs, while Dlg can form a ternary complex with Insc-Pins. Our results suggest that Insc does not passively couple polarity and spindle orientation but preferentially inhibits the Mud pathway, while allowing the Dlg pathway to remain active. Insc-regulated complex assembly may ensure that the spindle is attached to the cortex (via Dlg) before activation of spindle pulling forces by Dynein/Dynactin (via Mud). PMID:22253744

  17. MIMO: an efficient tool for molecular interaction maps overlap

    PubMed Central

    2013-01-01

    Background Molecular pathways represent an ensemble of interactions occurring among molecules within the cell and between cells. The identification of similarities between molecular pathways across organisms and functions has a critical role in understanding complex biological processes. For the inference of such novel information, the comparison of molecular pathways requires to account for imperfect matches (flexibility) and to efficiently handle complex network topologies. To date, these characteristics are only partially available in tools designed to compare molecular interaction maps. Results Our approach MIMO (Molecular Interaction Maps Overlap) addresses the first problem by allowing the introduction of gaps and mismatches between query and template pathways and permits -when necessary- supervised queries incorporating a priori biological information. It then addresses the second issue by relying directly on the rich graph topology described in the Systems Biology Markup Language (SBML) standard, and uses multidigraphs to efficiently handle multiple queries on biological graph databases. The algorithm has been here successfully used to highlight the contact point between various human pathways in the Reactome database. Conclusions MIMO offers a flexible and efficient graph-matching tool for comparing complex biological pathways. PMID:23672344

  18. OLYMPEX: A Ground Validation Campaign on the Olympic Peninsula in the Pacific Northwest

    NASA Astrophysics Data System (ADS)

    McMurdie, L. A.; Houze, R.; Lettenmaier, D. P.; Lundquist, J. D.; Petersen, W. A.; Schwaller, M.

    2013-12-01

    The Global Precipitation Measurement (GPM) Mission is scheduled for launch in early 2014. It's primary objective is to measure rain and snow globally especially in areas lacking surface observations or ground-based radar coverage. The GPM satellites will need to be able to detect solid and liquid precipitation over a wide range of intensities, locations and regimes. The core satellite of GPM will carry a passive microwave radiometer, the GPM Microwave Imager (GMI) and the first space-borne Ku/Ka band Dual Frequency Precipitation Radar (DPR). To satisfy the GPM measurement requirements and to assess how remotely sensed precipitation can be applied to a range of data applications (e.g. determining storm structures and monitoring flooding events and droughts) ground validation (GV) field campaigns are vital. As such, the Olympic Mountains GV Experiment (OLYMPEX) is planned for November 2015 - February 2016. The Olympic Peninsula is an ideal location to conduct a GV campaign. It is situated in the northwest corner of Washington State within an active mid-latitude winter storm track. It receives among the highest annual precipitation amounts in North America ranging from over 2500 mm on the coast to 4000 mm in the mountainous interior. In one compact area, the Olympic peninsula ranges from ocean to coast to land to mountains. This unique venue will enable the field campaign to monitor both upstream precipitation characteristics and processes over the ocean and their modification over complex terrain. Measuring precipitation from space in coastal and mountainous regions is challenging; however, the unique characteristics of the Olympic Peninsula make OLYMPEX a unique and viable opportunity to address these challenges and quantify the sources of variability and uncertainty in coastal and complex terrain. The scientific goals of the OLYMPEX field campaign include physical validation of satellite algorithms, precipitation processes in complex terrain, hydrological applications and modeling studies. In order to address these goals, a wide variety of existing and new observations and instrumentation is planned. These include an in situ surface observing networks of meteorological stations, rain and snow gauges, surface microphysical measurements and snowpack surveys. Surface-based remote instrumentation will include the existing coastal radar at Langley, WA, the NOAA/ESRL Atmospheric River Observatory at Westport, WA, and planned additional radars such as the NASA N-Pol S-Band dual-polarimetric and NASA Dual-Frequency Dual-Polarimetric Doppler (D3R) scanning radars for PPI and RHI scanning over the west slopes of the Olympics, and other mobile vertically-pointing radars. Several instrumented aircraft are likely to participate. The NASA DC-8 will be equipped with a Ka-Ku band dual-frequency radar and passive microwave sensors that simulate those on the GPM Core satellite. The University of North Dakota Citation will measure in situ microphysics. The aircraft measurements will determine upstream thermodynamic and moisture conditions, sample particle types and sizes for comparison with those employed in the satellite algorithm, and act as a proxy for the satellite itself. The ground-based measurements will test how well the satellite proxy measurements determine the rain and snow over complex terrain.

  19. Complexes of mismatched and complementary DNA with minor groove binders. Structures at nucleotide resolution via an improved hydroxyl radical cleavage methodology.

    PubMed

    Bialonska, Dobroslawa; Song, Kenneth; Bolton, Philip H

    2011-11-27

    Tumor cell lines can replicate faster than normal cells and many also have defective DNA repair pathways. This has lead to the investigation of the inhibition of DNA repair proteins as a means of therapeutic intervention. An alternative approach is to hide or mask damaged DNA from the repair systems. We have developed a protocol to investigate the structures of the complexes of damaged DNA with drug like molecules. Nucleotide resolution structural information can be obtained using an improved hydroxyl radical cleavage protocol. The use of a dT(n) tail increases the length of the smallest fragments of interest and allows efficient co-precipitation of the fragments with poly(A). The use of a fluorescent label, on the 5' end of the dT(n) tail, in conjunction with modified cleavage reaction conditions, avoids the lifetime and other problems with (32)P labeling. The structures of duplex DNAs containing AC and CC mismatches in the presence and absence of minor groove binders have been investigated as have those of the fully complementary DNA. The results indicate that the structural perturbations of the mismatches are localized, are sequence dependent and that the presence of a mismatch can alter the binding of drug like molecules. Copyright © 2011 Elsevier B.V. All rights reserved.

  20. Metabolomic profiling of anionic metabolites by capillary electrophoresis mass spectrometry.

    PubMed

    Soga, Tomoyoshi; Igarashi, Kaori; Ito, Chiharu; Mizobuchi, Katsuo; Zimmermann, Hans-Peter; Tomita, Masaru

    2009-08-01

    We describe a sheath flow capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS) method in the negative mode using a platinum electrospray ionization (ESI) spray needle, which allows the comprehensive analysis of anionic metabolites. The material of the spray needle had significant effect on the measurement of anions. A stainless steel spray needle was oxidized and corroded at the anodic electrode due to electrolysis. The precipitation of iron oxides (rust) plugged the capillary outlet, resulting in shortened capillary lifetime. Many anionic metabolites also formed complexes with the iron oxides or migrating nickel ion, which was also generated by electrolysis and moved toward the cathode (the capillary inlet). The metal-anion complex formation significantly reduced detection sensitivity of the anionic compounds. The use of a platinum ESI needle prevented both oxidation of the metals and needle corrosion. Sensitivity using the platinum needle increased from several- to 63-fold, with the largest improvements for anions exhibiting high metal chelating properties such as carboxylic acids, nucleotides, and coenzyme A compounds. The detection limits for most anions were between 0.03 and 0.87 micromol/L (0.8 and 24 fmol) at a signal-to-noise ratio of 3. This method is quantitative, sensitive, and robust, and its utility was demonstrated by the analysis of the metabolites in the central metabolic pathways extracted from mouse liver.

  1. Two-dimensional correlation spectroscopic analysis on the interaction between humic acids and aluminum coagulant.

    PubMed

    Jin, Pengkang; Song, Jina; Wang, Xiaochang C; Jin, Xin

    2018-02-01

    In this study, two-dimensional correlation spectroscopy integrated with synchronous fluorescence and infrared absorption spectroscopy was employed to investigate the interaction between humic acids and aluminum coagulant at slightly acidic and neutral pH. Higher fluorescence quenching was produced for fulvic-like and humic-like fractions at pH5. At pH5, the humic-like fractions originating from the carboxylic acid, carboxyl and polysaccharide compounds were bound to aluminum first, followed by the fulvic-like fractions originating from the carboxyl and polysaccharide compounds. This finding also demonstrated that the activated functional groups of HA were involved in forming the Al-HA complex, which was accompanied by the removal of other groups by co-precipitation. Meanwhile, at pH7, almost no fluorescence quenching occurred, and surface complexation was observed to occur, in which the activated functional groups were absorbed on the amorphous Al(OH) 3 . Two-dimensional FT-IR correlation spectroscopy indicated the sequence of HA structural change during coagulation with aluminum, with IR bands affected in the order of COOH>COO - >NH deformation of amide II>aliphatic hydroxyl COH at pH5, and COO - >aliphatic hydroxyl COH at pH7. This study provides a promising pathway for analysis and insight into the priority of functional groups in the interaction between organic matters and metal coagulants. Copyright © 2017. Published by Elsevier B.V.

  2. Correlation analysis of targeted proteins and metabolites to assess and engineer microbial isopentenol production.

    PubMed

    George, Kevin W; Chen, Amy; Jain, Aakriti; Batth, Tanveer S; Baidoo, Edward E K; Wang, George; Adams, Paul D; Petzold, Christopher J; Keasling, Jay D; Lee, Taek Soon

    2014-08-01

    The ability to rapidly assess and optimize heterologous pathway function is critical for effective metabolic engineering. Here, we develop a systematic approach to pathway analysis based on correlations between targeted proteins and metabolites and apply it to the microbial production of isopentenol, a promising biofuel. Starting with a seven-gene pathway, we performed a correlation analysis to reduce pathway complexity and identified two pathway proteins as the primary determinants of efficient isopentenol production. Aided by the targeted quantification of relevant pathway intermediates, we constructed and subsequently validated a conceptual model of isopentenol pathway function. Informed by our analysis, we assembled a strain which produced isopentenol at a titer 1.5 g/L, or 46% of theoretical yield. Our engineering approach allowed us to accurately identify bottlenecks and determine appropriate pathway balance. Paired with high-throughput cloning techniques and analytics, this strategy should prove useful for the analysis and optimization of increasingly complex heterologous pathways. © 2014 Wiley Periodicals, Inc.

  3. An algorithm for modularization of MAPK and calcium signaling pathways: comparative analysis among different species.

    PubMed

    Nayak, Losiana; De, Rajat K

    2007-12-01

    Signaling pathways are large complex biochemical networks. It is difficult to analyze the underlying mechanism of such networks as a whole. In the present article, we have proposed an algorithm for modularization of signal transduction pathways. Unlike studying a signaling pathway as a whole, this enables one to study the individual modules (less complex smaller units) easily and hence to study the entire pathway better. A comparative study of modules belonging to different species (for the same signaling pathway) has been made, which gives an overall idea about development of the signaling pathways over the taken set of species of calcium and MAPK signaling pathways. The superior performance, in terms of biological significance, of the proposed algorithm over an existing community finding algorithm of Newman [Newman MEJ. Modularity and community structure in networks. Proc Natl Acad Sci USA 2006;103(23):8577-82] has been demonstrated using the aforesaid pathways of H. sapiens.

  4. Rapid Production of Internally Structured Colloids by Flash Nanoprecipitation of Block Copolymer Blends.

    PubMed

    Grundy, Lorena S; Lee, Victoria E; Li, Nannan; Sosa, Chris; Mulhearn, William D; Liu, Rui; Register, Richard A; Nikoubashman, Arash; Prud'homme, Robert K; Panagiotopoulos, Athanassios Z; Priestley, Rodney D

    2018-05-08

    Colloids with internally structured geometries have shown great promise in applications ranging from biosensors to optics to drug delivery, where the internal particle structure is paramount to performance. The growing demand for such nanomaterials necessitates the development of a scalable processing platform for their production. Flash nanoprecipitation (FNP), a rapid and inherently scalable colloid precipitation technology, is used to prepare internally structured colloids from blends of block copolymers and homopolymers. As revealed by a combination of experiments and simulations, colloids prepared from different molecular weight diblock copolymers adopt either an ordered lamellar morphology consisting of concentric shells or a disordered lamellar morphology when chain dynamics are sufficiently slow to prevent defect annealing during solvent exchange. Blends of homopolymer and block copolymer in the feed stream generate more complex internally structured colloids, such as those with hierarchically structured Janus and patchy morphologies, due to additional phase separation and kinetic trapping effects. The ability of the FNP process to generate such a wide range of morphologies using a simple and scalable setup provides a pathway to manufacturing internally structured colloids on an industrial scale.

  5. The fate of cyanide in leach wastes at gold mines: an environmental perspective

    USGS Publications Warehouse

    Johnson, Craig A.

    2015-01-01

    Cyanide-containing and cyanide-related species are subject to attenuation mechanisms that lead to dispersal to the atmosphere, chemical transformation to other carbon and nitrogen species, or sequestration as cyanometallic precipitates or adsorbed species on mineral surfaces. Dispersal to the atmosphere and chemical transformation amount to permanent elimination of cyanide, whereas sequestration amounts to storage of cyanide in locations from which it can potentially be remobilized by infiltrating waters if conditions change. From an environmental perspective, the most significant cyanide releases from gold leach operations involve catastrophic spills of process solutions or leakage of effluent to the unsaturated or saturated zones. These release pathways are unfavorable for two important cyanide attenuation mechanisms that tend to occur naturally: dispersal of free cyanide to the atmosphere and sunlight-catalyzed dissociation of strong cyanometallic complexes, which produces free cyanide that can then disperse to the atmosphere. The widest margins of environmental safety will be achieved where mineral processing operations are designed so that time for offgassing, aeration, and sunlight exposure are maximized in the event that cyanide-bearing solutions are released inadvertently.

  6. Protein aggregation as bacterial inclusion bodies is reversible.

    PubMed

    Carrió, M M; Villaverde, A

    2001-01-26

    Inclusion bodies are refractile, intracellular protein aggregates usually observed in bacteria upon targeted gene overexpression. Since their occurrence has a major economical impact in protein production bio-processes, in vitro refolding strategies are under continuous exploration. In this work, we prove spontaneous in vivo release of both beta-galactosidase and P22 tailspike polypeptides from inclusion bodies resulting in their almost complete disintegration and in the concomitant appearance of soluble, properly folded native proteins with full biological activity. Since, in particular, the tailspike protein exhibits an unusually slow and complex folding pathway involving deep interdigitation of beta-sheet structures, its in vivo refolding indicates that bacterial inclusion body proteins are not collapsed into an irreversible unfolded state. Then, inclusion bodies can be observed as transient deposits of folding-prone polypeptides, resulting from an unbalanced equilibrium between in vivo protein precipitation and refolding that can be actively displaced by arresting protein synthesis. The observation that the formation of big inclusion bodies is reversible in vivo can be also relevant in the context of amyloid diseases, in which deposition of important amounts of aggregated protein initiates the pathogenic process.

  7. Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase

    PubMed Central

    Fukuoh, Atsushi; Cannino, Giuseppe; Gerards, Mike; Buckley, Suzanne; Kazancioglu, Selena; Scialo, Filippo; Lihavainen, Eero; Ribeiro, Andre; Dufour, Eric; Jacobs, Howard T

    2014-01-01

    The machinery of mitochondrial DNA (mtDNA) maintenance is only partially characterized and is of wide interest due to its involvement in disease. To identify novel components of this machinery, plus other cellular pathways required for mtDNA viability, we implemented a genome-wide RNAi screen in Drosophila S2 cells, assaying for loss of fluorescence of mtDNA nucleoids stained with the DNA-intercalating agent PicoGreen. In addition to previously characterized components of the mtDNA replication and transcription machineries, positives included many proteins of the cytosolic proteasome and ribosome (but not the mitoribosome), three proteins involved in vesicle transport, some other factors involved in mitochondrial biogenesis or nuclear gene expression, > 30 mainly uncharacterized proteins and most subunits of ATP synthase (but no other OXPHOS complex). ATP synthase knockdown precipitated a burst of mitochondrial ROS production, followed by copy number depletion involving increased mitochondrial turnover, not dependent on the canonical autophagy machinery. Our findings will inform future studies of the apparatus and regulation of mtDNA maintenance, and the role of mitochondrial bioenergetics and signaling in modulating mtDNA copy number. PMID:24952591

  8. Vitiligo - Part 1*

    PubMed Central

    Tarlé, Roberto Gomes; do Nascimento, Liliane Machado; Mira, Marcelo Távora; de Castro, Caio Cesar Silva

    2014-01-01

    Vitiligo is a chronic stigmatizing disease, already known for millennia, which mainly affects melanocytes from epidermis basal layer, leading to the development of hypochromic and achromic patches. Its estimated prevalence is 0.5% worldwide. The involvement of genetic factors controlling susceptibility to vitiligo has been studied over the last decades, and results of previous studies present vitiligo as a complex, multifactorial and polygenic disease. In this context, a few genes, including DDR1, XBP1 and NLRP1 have been consistently and functionally associated with the disease. Notwithstanding, environmental factors that precipitate or maintain the disease are yet to be described. The pathogenesis of vitiligo has not been totally clarified until now and many theories have been proposed. Of these, the autoimmune hypothesis is now the most cited and studied among experts. Dysfunction in metabolic pathways, which could lead to production of toxic metabolites causing damage to melanocytes, has also been investigated. Melanocytes adhesion deficit in patients with vitiligo is mainly speculated by the appearance of Köebner phenomenon, recently, new genes and proteins involved in this deficit have been found. PMID:24937821

  9. Modeling winter precipitation over the Juneau Icefield, Alaska, using a linear model of orographic precipitation

    NASA Astrophysics Data System (ADS)

    Roth, Aurora; Hock, Regine; Schuler, Thomas V.; Bieniek, Peter A.; Pelto, Mauri; Aschwanden, Andy

    2018-03-01

    Assessing and modeling precipitation in mountainous areas remains a major challenge in glacier mass balance modeling. Observations are typically scarce and reanalysis data and similar climate products are too coarse to accurately capture orographic effects. Here we use the linear theory of orographic precipitation model (LT model) to downscale winter precipitation from a regional climate model over the Juneau Icefield, one of the largest ice masses in North America (>4000 km2), for the period 1979-2013. The LT model is physically-based yet computationally efficient, combining airflow dynamics and simple cloud microphysics. The resulting 1 km resolution precipitation fields show substantially reduced precipitation on the northeastern portion of the icefield compared to the southwestern side, a pattern that is not well captured in the coarse resolution (20 km) WRF data. Net snow accumulation derived from the LT model precipitation agrees well with point observations across the icefield. To investigate the robustness of the LT model results, we perform a series of sensitivity experiments varying hydrometeor fall speeds, the horizontal resolution of the underlying grid, and the source of the meteorological forcing data. The resulting normalized spatial precipitation pattern is similar for all sensitivity experiments, but local precipitation amounts vary strongly, with greatest sensitivity to variations in snow fall speed. Results indicate that the LT model has great potential to provide improved spatial patterns of winter precipitation for glacier mass balance modeling purposes in complex terrain, but ground observations are necessary to constrain model parameters to match total amounts.

  10. Validation of Satellite Precipitation (trmm 3B43) in Ecuadorian Coastal Plains, Andean Highlands and Amazonian Rainforest

    NASA Astrophysics Data System (ADS)

    Ballari, D.; Castro, E.; Campozano, L.

    2016-06-01

    Precipitation monitoring is of utmost importance for water resource management. However, in regions of complex terrain such as Ecuador, the high spatio-temporal precipitation variability and the scarcity of rain gauges, make difficult to obtain accurate estimations of precipitation. Remotely sensed estimated precipitation, such as the Multi-satellite Precipitation Analysis TRMM, can cope with this problem after a validation process, which must be representative in space and time. In this work we validate monthly estimates from TRMM 3B43 satellite precipitation (0.25° x 0.25° resolution), by using ground data from 14 rain gauges in Ecuador. The stations are located in the 3 most differentiated regions of the country: the Pacific coastal plains, the Andean highlands, and the Amazon rainforest. Time series, between 1998 - 2010, of imagery and rain gauges were compared using statistical error metrics such as bias, root mean square error, and Pearson correlation; and with detection indexes such as probability of detection, equitable threat score, false alarm rate and frequency bias index. The results showed that precipitation seasonality is well represented and TRMM 3B43 acceptably estimates the monthly precipitation in the three regions of the country. According to both, statistical error metrics and detection indexes, the coastal and Amazon regions are better estimated quantitatively than the Andean highlands. Additionally, it was found that there are better estimations for light precipitation rates. The present validation of TRMM 3B43 provides important results to support further studies on calibration and bias correction of precipitation in ungagged watershed basins.

  11. Macromolecular Transport between the Nucleus and the Cytoplasm: Advances in Mechanism and Emerging Links to Disease

    PubMed Central

    Tran, Elizabeth J.; King, Megan C.; Corbett, Anita H.

    2014-01-01

    Transport of macromolecules between the cytoplasm and the nucleus is critical for the function of all eukaryotic cells. Large macromolecular channels termed nuclear pore complexes that span the nuclear envelope mediate the bidirectional transport of cargoes between the nucleus and cytoplasm. However, the influence of macromolecular trafficking extends past the nuclear pore complex to transcription and RNA processing within the nucleus and signaling pathways that reach into the cytoplasm and beyond. At the Mechanisms of Nuclear Transport biennial meeting held from October 18-23, 2013 in Woods Hole, MA, researchers in the field met to report on their recent findings. The work presented highlighted significant advances in understanding nucleocytoplasmic trafficking including how transport receptors and cargoes pass through the nuclear pore complex, the many signaling pathways that impinge on transport pathways, interplay between the nuclear envelope, nuclear pore complexes, and transport pathways, and numerous links between transport pathways and human disease. The goal of this review is to highlight newly emerging themes in nuclear transport and underscore the major questions that are likely to be the focus of future research in the field. PMID:25116306

  12. High-resolution projections of 21st century climate over the Athabasca River Basin through an integrated evaluation-classification-downscaling-based climate projection framework

    NASA Astrophysics Data System (ADS)

    Cheng, Guanhui; Huang, Guohe; Dong, Cong; Zhu, Jinxin; Zhou, Xiong; Yao, Y.

    2017-03-01

    An evaluation-classification-downscaling-based climate projection (ECDoCP) framework is developed to fill a methodological gap of general circulation models (GCMs)-driven statistical-downscaling-based climate projections. ECDoCP includes four interconnected modules: GCM evaluation, climate classification, statistical downscaling, and climate projection. Monthly averages of daily minimum (Tmin) and maximum (Tmax) temperature and daily cumulative precipitation (Prec) over the Athabasca River Basin (ARB) at a 10 km resolution in the 21st century under four Representative Concentration Pathways (RCPs) are projected through ECDoCP. At the octodecadal scale, temperature and precipitation would increase; after bias correction, temperature would increase with a decreased increment, while precipitation would increase only under RCP 8.5. Interannual variability of climate anomalies would increase from RCPs 4.5, 2.6, 6.0 to 8.5 for temperature and from RCPs 2.6, 4.5, 6.0 to 8.5 for precipitation. Bidecadal averaged climate anomalies would decrease from December-January-February (DJF), March-April-May (MAM), September-October-November (SON) to June-July-August (JJA) for Tmin, from DJF, SON, MAM to JJA for Tmax, and from JJA, MAM, SON to DJF for Prec. Climate projection uncertainties would decrease in May to September for temperature and in November to April for precipitation. Spatial climatic variability would not obviously change with RCPs; climatic anomalies are highly correlated with climate-variable magnitudes. Climate anomalies would decrease from upstream to downstream for temperature, and precipitation would follow an opposite pattern. The north end and the other zones would have colder and warmer days, respectively; precipitation would decrease in the upstream and increase in the remaining region. Climate changes might lead to issues, e.g., accelerated glacier/snow melting, deserving attentions of researchers and the public.

  13. Precipitation intensity-duration-frequency curves for central Belgium with an ensemble of EURO-CORDEX simulations, and associated uncertainties

    NASA Astrophysics Data System (ADS)

    Hosseinzadehtalaei, Parisa; Tabari, Hossein; Willems, Patrick

    2018-02-01

    An ensemble of 88 regional climate model (RCM) simulations at 0.11° and 0.44° spatial resolutions from the EURO-CORDEX project is analyzed for central Belgium to investigate the projected impact of climate change on precipitation intensity-duration-frequency (IDF) relationships and extreme precipitation quantiles typically used in water engineering designs. The rate of uncertainty arising from the choice of RCM, driving GCM, and radiative concentration pathway (RCP4.5 & RCP8.5) is quantified using a variance decomposition technique after reconstruction of missing data in GCM × RCM combinations. A comparative analysis between the historical simulations of the EURO-CORDEX 0.11° and 0.44° RCMs shows higher precipitation intensities by the finer resolution runs, leading to a larger overestimation of the observations-based IDFs by the 0.11° runs. The results reveal that making a temporal stationarity assumption for the climate system may lead to underestimation of precipitation quantiles up to 70% by the end of this century. This projected increase is generally larger for the 0.11° RCMs compared with the 0.44° RCMs. The relative changes in extreme precipitation do depend on return period and duration, indicating an amplification for larger return periods and for smaller durations. The variance decomposition approach generally identifies RCM as the most dominant component of uncertainty in changes of more extreme precipitation (return period of 10 years) for both 0.11° and 0.44° resolutions, followed by GCM and RCP scenario. The uncertainties associated with cross-contributions of RCMs, GCMs, and RCPs play a non-negligible role in the associated uncertainties of the changes.

  14. Impacts of future changes in weather condition on U.S. transportation

    NASA Astrophysics Data System (ADS)

    Ashfaq, M.; Pagan, B. R.; Bonds, B. W.; Rastogi, D.

    2016-12-01

    High-resolution near-term climate projections suggest an intensification of the regional hydrological cycle over the U.S., leading to stronger and more frequent precipitation events. Increase in precipitation extremes is driven by both warm season convection driven rainstorms and frontal based cold season snowstorms. Results also indicate that future warming is driven more by hot extremes, as decrease in cold extremes is three times less than increase in hot extremes. While projected changes may likely impact the transportation system across the U.S., accurate estimation of such impacts requires knowledge of changes in precipitation types (rain, snow, ice, freezing rain). Here we apply four commonly used precipitation typing algorithms to determine different types of precipitation in an 11-memebr high-resolution (18 km) climate projections dataset that covers 40 years (1966-2005) in the baseline and 40 years (2011-2050) in the future period under Representative Concentration Pathway 8.5. The results are compared with the NARR-based precipitation classification in the historical period at the county level. Documented weather related county level fatal crash data for the CONUS and non-fatal crash data for selected states in the eastern half of the U.S. is compiled to develop the historical baseline for the impact of weather conditions on transportation. Further analysis is carried out to understand the ability of an ensemble of high-resolution simulations to produce different precipitation types in the baseline period, potential changes in the occurrence of each type of weather condition in the future period and that how such changes may impact road conditions, vehicle crashes and human fatalities. Additional analysis will also be explored to understand the impact of changes in winter weather conditions on the cost associated with road maintenance.

  15. Molecular interaction of the first 3 enzymes of the de novo pyrimidine biosynthetic pathway of Trypanosoma cruzi

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nara, Takeshi, E-mail: tnara@juntendo.ac.jp; Hashimoto, Muneaki; Hirawake, Hiroko

    2012-02-03

    Highlights: Black-Right-Pointing-Pointer An Escherichia coli strain co-expressing CPSII, ATC, and DHO of Trypanosoma cruzi was constructed. Black-Right-Pointing-Pointer Molecular interactions between CPSII, ATC, and DHO of T. cruzi were demonstrated. Black-Right-Pointing-Pointer CPSII bound with both ATC and DHO. Black-Right-Pointing-Pointer ATC bound with both CPSII and DHO. Black-Right-Pointing-Pointer A functional tri-enzyme complex might precede the establishment of the fused enzyme. -- Abstract: The first 3 reaction steps of the de novo pyrimidine biosynthetic pathway are catalyzed by carbamoyl-phosphate synthetase II (CPSII), aspartate transcarbamoylase (ATC), and dihydroorotase (DHO), respectively. In eukaryotes, these enzymes are structurally classified into 2 types: (1) a CPSII-DHO-ATC fusionmore » enzyme (CAD) found in animals, fungi, and amoebozoa, and (2) stand-alone enzymes found in plants and the protist groups. In the present study, we demonstrate direct intermolecular interactions between CPSII, ATC, and DHO of the parasitic protist Trypanosoma cruzi, which is the causative agent of Chagas disease. The 3 enzymes were expressed in a bacterial expression system and their interactions were examined. Immunoprecipitation using an antibody specific for each enzyme coupled with Western blotting-based detection using antibodies for the counterpart enzymes showed co-precipitation of all 3 enzymes. From an evolutionary viewpoint, the formation of a functional tri-enzyme complex may have preceded-and led to-gene fusion to produce the CAD protein. This is the first report to demonstrate the structural basis of these 3 enzymes as a model of CAD. Moreover, in conjunction with the essentiality of de novo pyrimidine biosynthesis in the parasite, our findings provide a rationale for new strategies for developing drugs for Chagas disease, which target the intermolecular interactions of these 3 enzymes.« less

  16. Influence of land-atmosphere feedbacks on temperature and precipitation extremes in the GLACE-CMIP5 ensemble

    NASA Astrophysics Data System (ADS)

    Lorenz, Ruth; Argüeso, Daniel; Donat, Markus G.; Pitman, Andrew J.; van den Hurk, Bart; Berg, Alexis; Lawrence, David M.; Chéruy, Frédérique; Ducharne, Agnès.; Hagemann, Stefan; Meier, Arndt; Milly, P. C. D.; Seneviratne, Sonia I.

    2016-01-01

    We examine how soil moisture variability and trends affect the simulation of temperature and precipitation extremes in six global climate models using the experimental protocol of the Global Land-Atmosphere Coupling Experiment of the Coupled Model Intercomparison Project, Phase 5 (GLACE-CMIP5). This protocol enables separate examinations of the influences of soil moisture variability and trends on the intensity, frequency, and duration of climate extremes by the end of the 21st century under a business-as-usual (Representative Concentration Pathway 8.5) emission scenario. Removing soil moisture variability significantly reduces temperature extremes over most continental surfaces, while wet precipitation extremes are enhanced in the tropics. Projected drying trends in soil moisture lead to increases in intensity, frequency, and duration of temperature extremes by the end of the 21st century. Wet precipitation extremes are decreased in the tropics with soil moisture trends in the simulations, while dry extremes are enhanced in some regions, in particular the Mediterranean and Australia. However, the ensemble results mask considerable differences in the soil moisture trends simulated by the six climate models. We find that the large differences between the models in soil moisture trends, which are related to an unknown combination of differences in atmospheric forcing (precipitation, net radiation), flux partitioning at the land surface, and how soil moisture is parameterized, imply considerable uncertainty in future changes in climate extremes.

  17. Hierarchical Cu precipitation in lamellated steel after multistage heat treatment

    NASA Astrophysics Data System (ADS)

    Liu, Qingdong; Gu, Jianfeng

    2017-09-01

    The hierarchical distribution of Cu-rich precipitates (CRPs) and related partitioning and segregation behaviours of solute atoms were investigated in a 1.54 Cu-3.51 Ni (wt.%) low-carbon high-strength low-alloy (HSLA) steel after multistage heat treatment by using the combination of electron backscatter diffraction (EBSD), transmission electron microscopy (TEM) and atom probe tomography (APT). Intercritical tempering at 725 °C of as-quenched lathlike martensitic structure leads to the coprecipitation of CRPs at the periphery of a carbide precipitate which is possibly in its paraequilibrium state due to distinct solute segregation at the interface. The alloyed carbide and CRPs provide constituent elements for each other and make the coprecipitation thermodynamically favourable. Meanwhile, austenite reversion occurs to form fresh secondary martensite (FSM) zone where is rich in Cu and pertinent Ni and Mn atoms, which gives rise to a different distributional morphology of CRPs with large size and high density. In addition, conventional tempering at 500 °C leads to the formation of nanoscale Cu-rich clusters in α-Fe matrix. As a consequence, three populations of CRPs are hierarchically formed around carbide precipitate, at FSM zone and in α-Fe matrix. The formation of different precipitated features can be turned by controlling diffusion pathways of related solute atoms and further to tailor mechanical properties via proper multistage heat treatments.

  18. Current challenges and future directions for bacterial self-healing concrete.

    PubMed

    Lee, Yun Suk; Park, Woojun

    2018-04-01

    Microbially induced calcium carbonate precipitation (MICP) has been widely explored and applied in the field of environmental engineering over the last decade. Calcium carbonate is naturally precipitated as a byproduct of various microbial metabolic activities. This biological process was brought into practical use to restore construction materials, strengthen and remediate soil, and sequester carbon. MICP has also been extensively examined for applications in self-healing concrete. Biogenic crack repair helps mitigate the high maintenance costs of concrete in an eco-friendly manner. In this process, calcium carbonate precipitation (CCP)-capable bacteria and nutrients are embedded inside the concrete. These bacteria are expected to increase the durability of the concrete by precipitating calcium carbonate in situ to heal cracks that develop in the concrete. However, several challenges exist with respect to embedding such bacteria; harsh conditions in concrete matrices are unsuitable for bacterial life, including high alkalinity (pH up to 13), high temperatures during manufacturing processes, and limited oxygen supply. Additionally, many biological factors, including the optimum conditions for MICP, the molecular mechanisms involved in MICP, the specific microorganisms suitable for application in concrete, the survival characteristics of the microorganisms embedded in concrete, and the amount of MICP in concrete, remain unclear. In this paper, metabolic pathways that result in conditions favorable for calcium carbonate precipitation, current and potential applications in concrete, and the remaining biological challenges are reviewed.

  19. A Rice Phenolic Efflux Transporter Is Essential for Solubilizing Precipitated Apoplasmic Iron in the Plant Stele*

    PubMed Central

    Ishimaru, Yasuhiro; Kakei, Yusuke; Shimo, Hugo; Bashir, Khurram; Sato, Yutaka; Sato, Yuki; Uozumi, Nobuyuki; Nakanishi, Hiromi; Nishizawa, Naoko K.

    2011-01-01

    Iron deficiency is one of the major agricultural problems, as 30% of the arable land of the world is too alkaline for optimal crop production, rendering plants short of available iron despite its abundance. To take up apoplasmic precipitated iron, plants secrete phenolics such as protocatechuic acid (PCA) and caffeic acid. The molecular pathways and genes of iron uptake strategies are already characterized, whereas the molecular mechanisms of phenolics synthesis and secretion have not been clarified, and no phenolics efflux transporters have been identified in plants yet. Here we describe the identification of a phenolics efflux transporter in rice. We identified a cadmium-accumulating rice mutant in which the amount of PCA and caffeic acid in the xylem sap was dramatically reduced and hence named it phenolics efflux zero 1 (pez1). PEZ1 localized to the plasma membrane and transported PCA when expressed in Xenopus laevis oocytes. PEZ1 localized mainly in the stele of roots. In the roots of pez1, precipitated apoplasmic iron increased. The growth of PEZ1 overexpression lines was severely restricted, and these lines accumulated more iron as a result of the high solubilization of precipitated apoplasmic iron in the stele. We show that PEZ1 is responsible for an increase of PCA concentration in the xylem sap and is essential for the utilization of apoplasmic precipitated iron in the stele. PMID:21602276

  20. A computational microscopy study of nanostructural evolution in irradiated pressure vessel steels

    NASA Astrophysics Data System (ADS)

    Odette, G. R.; Wirth, B. D.

    1997-11-01

    Nanostructural features that form in reactor pressure vessel steels under neutron irradiation at around 300°C lead to significant hardening and embrittlement. Continuum thermodynamic-kinetic based rate theories have been very successful in modeling the general characteristics of the copper and manganese nickel rich precipitate evolution, often the dominant source of embrittlement. However, a more detailed atomic scale understanding of these features is needed to interpret experimental measurements and better underpin predictive embrittlement models. Further, other embrittling features, believed to be subnanometer defect (vacancy)-solute complexes and small regions of modest enrichment of solutes are not well understood. A general approach to modeling embrittlement nanostructures, based on the concept of a computational microscope, is described. The objective of the computational microscope is to self-consistently integrate atomic scale simulations with other sources of information, including a wide range of experiments. In this work, lattice Monte Carlo (LMC) simulations are used to resolve the chemically and structurally complex nature of CuMnNiSi precipitates. The LMC simulations unify various nanoscale analytical characterization methods and basic thermodynamics. The LMC simulations also reveal that significant coupled vacancy and solute clustering takes place during cascade aging. The cascade clustering produces the metastable vacancy-cluster solute complexes that mediate flux effects. Cascade solute clustering may also play a role in the formation of dilute atmospheres of solute enrichment and enhance the nucleation of manganese-nickel rich precipitates at low Cu levels. Further, the simulations suggest that complex, highly correlated processes (e.g. cluster diffusion, formation of favored vacancy diffusion paths and solute scavenging vacancy cluster complexes) may lead to anomalous fast thermal aging kinetics at temperatures below about 450°C. The potential technical significance of these phenomena is described.

  1. A Global Assessment of Dissolved Organic Carbon in Precipitation

    NASA Astrophysics Data System (ADS)

    Safieddine, Sarah A.; Heald, Colette L.

    2017-11-01

    Precipitation is the largest physical removal pathway of atmospheric reactive organic carbon in the form of dissolved organic carbon (DOC). We present the first global DOC distribution simulated with a global model. A total of 85 and 188 Tg C yr-1 are deposited to the ocean and the land, respectively, with DOC ranging between 0.1 and 10 mg C L-1 in this GEOS-Chem simulation. We compare the 2010 simulated DOC to a 30 year synthesis of measurements. Despite limited measurements and imperfect temporal matching, the model is able to reproduce much of the spatial variability of DOC (r = 0.63), with a low bias of 35%. We present the global average carbon oxidation state (OSc>¯) as a simple metric for describing the chemical composition. In the atmosphere, -1.8≤OSc>¯≤-0.6, and the increase in solubility upon oxidation leads to a global increase in OSc>¯ in precipitation with -0.6≤OSc>¯DOC≤0.

  2. Water availability change in central Belgium for the late 21st century

    NASA Astrophysics Data System (ADS)

    Tabari, Hossein; Taye, Meron Teferi; Willems, Patrick

    2015-08-01

    We investigate the potential impact of climate change on water availability in central Belgium. Two water balance components being precipitation and potential evapotranspiration are initially projected for the late 21st century (2071-2100) based on 30 Coupled Models Intercomparison Project phase 5 (CMIP5) models relative to a baseline period of 1961-1990, assuming forcing by four representative concentration pathway emission scenarios (RCP2.6, RCP4.5, RCP6.0, RCP8.5). The future available water is then estimated as the difference between precipitation and potential evapotranspiration projections. The number of wet days and mean monthly precipitation for summer season is projected to decrease in most of the scenarios, while the projections show an increase in those variables for the winter months. Potential evapotranspiration is expected to increase during both winter and summer seasons. The results show a decrease in water availability for summer and an increase for winter, suggesting drier summers and wetter winters for the late 21st century in central Belgium.

  3. Observed and Projected Precipitation Changes over the Nine US Climate Regions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chylek, Petr; Dubey, Manvendra; Hengartner, Nicholas

    Here, we analyze the past (1900–2015) temperature and precipitation changes in nine separate US climate regions. We find that the temperature increased in a statistically significant (95% confidence level equivalent to alpha level of 0.05) manner in all of these regions. However, the variability in the observed precipitation was much more complex. In the eastern US (east of Rocky Mountains), the precipitation increased in all five climate regions and the increase was statistically significant in three of them. In contract, in the western US, the precipitation increased in two regions and decreased in two with no statistical significance in anymore » region. The CMIP5 climate models (an ensemble mean) were not able to capture properly either the large precipitation differences between the eastern and the western US, or the changes of precipitation between 1900 and 2015 in eastern US. The statistical regression model explains the differences between the eastern and western US precipitation as results of different significant predictors. The anthropogenic greenhouse gases and aerosol (GHGA) are the major forcing of the precipitation in the eastern part of US, while the Pacific Decadal Oscillation (PDO) has the major influence on precipitation in the western part of the US. This analysis suggests that the precipitation over the eastern US increased at an approximate rate of 6.7%/K, in agreement with the Clausius-Clapeyron equation, while the precipitation of the western US was approximately constant, independent of the temperature. Future precipitation over the western part of the US will depend on the behavior of the PDO, and how it (PDO) may be affected by future warming. Low hydrological sensitivity (percent increase of precipitation per one K of warming) projected by the CMIP5 models for the eastern US suggests either an underestimate of future precipitation or an overestimate of future warming.« less

  4. Observed and Projected Precipitation Changes over the Nine US Climate Regions

    DOE PAGES

    Chylek, Petr; Dubey, Manvendra; Hengartner, Nicholas; ...

    2017-10-25

    Here, we analyze the past (1900–2015) temperature and precipitation changes in nine separate US climate regions. We find that the temperature increased in a statistically significant (95% confidence level equivalent to alpha level of 0.05) manner in all of these regions. However, the variability in the observed precipitation was much more complex. In the eastern US (east of Rocky Mountains), the precipitation increased in all five climate regions and the increase was statistically significant in three of them. In contract, in the western US, the precipitation increased in two regions and decreased in two with no statistical significance in anymore » region. The CMIP5 climate models (an ensemble mean) were not able to capture properly either the large precipitation differences between the eastern and the western US, or the changes of precipitation between 1900 and 2015 in eastern US. The statistical regression model explains the differences between the eastern and western US precipitation as results of different significant predictors. The anthropogenic greenhouse gases and aerosol (GHGA) are the major forcing of the precipitation in the eastern part of US, while the Pacific Decadal Oscillation (PDO) has the major influence on precipitation in the western part of the US. This analysis suggests that the precipitation over the eastern US increased at an approximate rate of 6.7%/K, in agreement with the Clausius-Clapeyron equation, while the precipitation of the western US was approximately constant, independent of the temperature. Future precipitation over the western part of the US will depend on the behavior of the PDO, and how it (PDO) may be affected by future warming. Low hydrological sensitivity (percent increase of precipitation per one K of warming) projected by the CMIP5 models for the eastern US suggests either an underestimate of future precipitation or an overestimate of future warming.« less

  5. The preparation of large surface area lanthanum based perovskite supports for AuPt nanoparticles: tuning the glycerol oxidation reaction pathway by switching the perovskite B site

    PubMed Central

    Evans, Christopher D.; Smith, Paul J.; Manning, Troy D.; Miedziak, Peter J.; Brett, Gemma L.; Armstrong, Robert D.; Bartley, Jonathan K.; Taylor, Stuart H.; Rosseinsky, Matthew J.; Hutchings, Graham J.

    2016-01-01

    Gold and gold alloys, in the form of supported nanoparticles, have been shown over the last three decades to be highly effective oxidation catalysts. Mixed metal oxide perovskites, with their high structural tolerance, are ideal for investigating how changes in the chemical composition of supports affect the catalysts' properties, while retaining similar surface areas, morphologies and metal co-ordinations. However, a significant disadvantage of using perovskites as supports is their high crystallinity and small surface area. We report the use of a supercritical carbon dioxide anti-solvent precipitation methodology to prepare large surface area lanthanum based perovskites, making the deposition of 1 wt% AuPt nanoparticles feasible. These catalysts were used for the selective oxidation of glycerol. By changing the elemental composition of the perovskite B site, we dramatically altered the reaction pathway between a sequential oxidation route to glyceric or tartronic acid and a dehydration reaction pathway to lactic acid. Selectivity profiles were correlated to reported oxygen adsorption capacities of the perovskite supports and also to changes in the AuPt nanoparticle morphologies. Extended time on line analysis using the best oxidation catalyst (AuPt/LaMnO3) produced an exceptionally high tartronic acid yield. LaMnO3 produced from alternative preparation methods was found to have lower activities, but gave comparable selectivity profiles to that produced using the supercritical carbon dioxide anti-solvent precipitation methodology. PMID:27074316

  6. The preparation of large surface area lanthanum based perovskite supports for AuPt nanoparticles: tuning the glycerol oxidation reaction pathway by switching the perovskite B site.

    PubMed

    Evans, Christopher D; Kondrat, Simon A; Smith, Paul J; Manning, Troy D; Miedziak, Peter J; Brett, Gemma L; Armstrong, Robert D; Bartley, Jonathan K; Taylor, Stuart H; Rosseinsky, Matthew J; Hutchings, Graham J

    2016-07-04

    Gold and gold alloys, in the form of supported nanoparticles, have been shown over the last three decades to be highly effective oxidation catalysts. Mixed metal oxide perovskites, with their high structural tolerance, are ideal for investigating how changes in the chemical composition of supports affect the catalysts' properties, while retaining similar surface areas, morphologies and metal co-ordinations. However, a significant disadvantage of using perovskites as supports is their high crystallinity and small surface area. We report the use of a supercritical carbon dioxide anti-solvent precipitation methodology to prepare large surface area lanthanum based perovskites, making the deposition of 1 wt% AuPt nanoparticles feasible. These catalysts were used for the selective oxidation of glycerol. By changing the elemental composition of the perovskite B site, we dramatically altered the reaction pathway between a sequential oxidation route to glyceric or tartronic acid and a dehydration reaction pathway to lactic acid. Selectivity profiles were correlated to reported oxygen adsorption capacities of the perovskite supports and also to changes in the AuPt nanoparticle morphologies. Extended time on line analysis using the best oxidation catalyst (AuPt/LaMnO3) produced an exceptionally high tartronic acid yield. LaMnO3 produced from alternative preparation methods was found to have lower activities, but gave comparable selectivity profiles to that produced using the supercritical carbon dioxide anti-solvent precipitation methodology.

  7. Studying precipitation recycling over the Tibetan Plateau using evaporation-tagging and back-trajectory analysis

    NASA Astrophysics Data System (ADS)

    Gao, Y.

    2017-12-01

    Regional precipitation recycling (i.e., the contribution of local evaporation to local precipitation) is an important component of water cycle over the Tibetan Plateau (TP). Two methods were used to investigate regional precipitation recycling: 1) tracking of tagged atmospheric water parcels originating from evaporation in a source region (i.e., E-tagging), and 2) back-trajectory approach to track the evaporative sources contributed to precipitation in a specific region. These two methods were applied to Weather Research and Forecasting (WRF) regional climate simulations to quantify the precipitation recycling ratio in the TP for three selected years: climatologically normal, dry and wet year. The simulation region is characterized by high average elevation above 4000 m and complex terrain. The back-trajectory approach is also calculated over three sub-regions over the TP: namely western, northeastern and southeastern TP, and the E-tagging approach could provide recycling-ratio distributions over the whole TP. Three aspects are investigated to characterize the precipitation recycling: annual mean, seasonal variations and spatial distributions. Averaged over the TP, the precipitation recycling ratio estimated by the E-tagging approach is higher than that from the back-trajectory method. The back-trajectory approach uses a precipitation threshold as total precipitation in five days divided by a random number, and this number was set to 500 as a tread off between equilibrium and computational efficiency. Lower recycling ratio derived from the back-trajectory approach is related to the precipitation threshold used. The E-tagging, however, tracks every air parcel of evaporation regardless of the precipitation amount. There is no obvious seasonal variation in the recycling ratio using both methods. The E-tagging approach shows high recycling ratios in the center TP, indicating stronger land-atmospheric interactions than elsewhere.

  8. Sensitivity of WRF-ARW for Heavy Precipitation Event over the Eastern Black Sea Region

    NASA Astrophysics Data System (ADS)

    Doǧan, Onur Hakan; Önol, Barış

    2017-04-01

    In this study, we examined the extreme summer precipitation case over the Eastern Black Sea region of Turkey by using WRF-ARW. 11 people were killed by the flood and many buildings were damaged by the landslides in Artvin province. The flood caused by heavy precipitation between August 23 and 24, 2015 and the station observation is 255 mm total precipitation for the two days. We have also used satellite based observational data (Global Precipitation Measurement: GPM), which represents 150 mm total precipitation during case, to validate precipitation simulations. We designed three nested domains with 27-9-3 km resolutions for the simulations and the inner domain covers the all Black Sea and the surrounded coasts. The simulations have been driven by ECMWF ERA-Interim data and the initial conditions have been generated for 4 different simulations which are 3-days, 7-days, 15-days and 25-days long. WRF-ARW model physics parameters have been tested to improve simulation capability for extreme precipitation events. The microphysics (Kessler and New-Thompson) and PBL (YSU PBL and Mellor-Yamada-Janjic) options have been applied for each simulations separately, therefore 15 sensitivity simulation have been analyzed by using different parametrizations. In general, all simulations underestimated the two days extreme precipitation event which the large scale flow interact with warmer sea surface temperatures and complex topography over the eastern Black Sea region. The 3-days simulation with Kessler microphysics and YSU PBL predicts 148 mm precipitation which is highest simulated precipitation compare to all simulations for the corresponding station location. Moreover 25-days simulation represents better spatial coverage for precipitation pattern compare to the GPM data.

  9. The impacts of precipitation amount simulation on hydrological modeling in Nordic watersheds

    NASA Astrophysics Data System (ADS)

    Li, Zhi; Brissette, Fancois; Chen, Jie

    2013-04-01

    Stochastic modeling of daily precipitation is very important for hydrological modeling, especially when no observed data are available. Precipitation is usually modeled by two component model: occurrence generation and amount simulation. For occurrence simulation, the most common method is the first-order two-state Markov chain due to its simplification and good performance. However, various probability distributions have been reported to simulate precipitation amount, and spatiotemporal differences exist in the applicability of different distribution models. Therefore, assessing the applicability of different distribution models is necessary in order to provide more accurate precipitation information. Six precipitation probability distributions (exponential, Gamma, Weibull, skewed normal, mixed exponential, and hybrid exponential/Pareto distributions) are directly and indirectly evaluated on their ability to reproduce the original observed time series of precipitation amount. Data from 24 weather stations and two watersheds (Chute-du-Diable and Yamaska watersheds) in the province of Quebec (Canada) are used for this assessment. Various indices or statistics, such as the mean, variance, frequency distribution and extreme values are used to quantify the performance in simulating the precipitation and discharge. Performance in reproducing key statistics of the precipitation time series is well correlated to the number of parameters of the distribution function, and the three-parameter precipitation models outperform the other models, with the mixed exponential distribution being the best at simulating daily precipitation. The advantage of using more complex precipitation distributions is not as clear-cut when the simulated time series are used to drive a hydrological model. While the advantage of using functions with more parameters is not nearly as obvious, the mixed exponential distribution appears nonetheless as the best candidate for hydrological modeling. The implications of choosing a distribution function with respect to hydrological modeling and climate change impact studies are also discussed.

  10. Filterability of the suspension from germanium precipitation with aqueous tannin extract solution

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mikhailov, N.F.; Petropol'skii, V.M.; Semenenko, L.E.

    1978-01-01

    We have already described the use of a neutral aqueous solution of tannin extract to recover germanium from collecting-mains liquor in coking plants. Further pilot commercial trials have encountered problems with the poor filterability of the precipitate obtained when germanium is extracted with this reagent in alkaline media. There are published references to the colloidal nature of the precipitated tannin-germanium complex. It is also known that the alkalinity of the medium influences the degree of association in colloidal systems to a marked extent. Accordingly, special research was needed to establish the relationship between the pH of the precipitation medium andmore » the filterability of the germanium deposit. Samples of collecting-mains liquor were taken from one of the southern coking plants to determine the optimum filtration behavior. The collecting-mains liquor should first be purged of volatile ammonia and then adjusted to pH = 6.5 to 6.7 for precipitation.« less

  11. Non-Metallic Ti Oxides and MnS/FeS2 Complex Precipitation in Ti-Killed Steel

    NASA Astrophysics Data System (ADS)

    Chen, Jieyun; Zhao, Dan; Li, Huigai; Zheng, Shaobo

    Titanium deoxidized experiments can be carried in vacuum induction furnace by adding Ti-Fe alloy in molten steel to simulate strip casting. Sub-rapid solidification samples were obtained in the method of suing copper mold. The morphology, the chemical composition and the structures of nanometer precipitations were carried out to investigate by transmission electron microscope (TEM) with Energy Dispersive X ray Spectrum (EDX) and by collecting diffraction patterns with carbon extraction specimens. It has been found that titanium oxides were TiO monoclinic, Ti4O7 anorthic and TiO2 orthogonal structure in one nanometer inclusion, as the composite oxide was precipitated MnS/FeS2 cubic structure during sub-rapid solidification. Thermodynamic calculation analysis showed that it was possible to precipitate different kinds of nonstoichiometric TiOx. The solid solution between MnS/FeS2 will precipitate on the surface of titanium oxides because of good coherency relationship.

  12. Pediatric Status Epilepticus Management

    PubMed Central

    Abend, Nicholas S; Loddenkemper, Tobias

    2014-01-01

    Purpose of Review This review discusses management of status epilepticus in children including both anticonvulsant medications and overall management approaches. Recent Findings Rapid management of status epilepticus is associated with a greater likelihood of seizure termination and better outcomes, yet data indicate there are often management delays. This review discusses an overall management approach aiming to simultaneously identify and manage underlying precipitant etiologies, administer anticonvulsants in rapid succession until seizures have terminated, and identify and manage systemic complications. An example management pathway is provided. Summary Status epilepticus is a common neurologic emergency in children and requires rapid intervention. Having a predetermined status epilepticus management pathway can expedite management. PMID:25304961

  13. Fluid and gas expulsion on the northern Gulf of Mexico continental slope: Mud-prone to mineral-prone responses

    NASA Astrophysics Data System (ADS)

    Roberts, Harry H.

    In the northern Gulf of Mexico slope province, complex structural relationships resulting from dynamic adjustments between large volumes of sediments and salt provide numerous faulted pathways for deep subsurface fluids and gases to be transported to the modern seafloor. Geological response at the seafloor to these hydrocarbon-rich fluids and gases is highly variable and dependent largely on rate and duration of delivery as well as fluid and gas composition. In a qualitative framework, rapid expulsions of fluids (including fluidized sediment) and gases generally result in buildups of sediment in the form of cones (mud volcanoes) that vary from a few meters to several kilometers in diameter and/or sheet-like flows that may extend tens of kilometers downslope. Conversely, slow seepage promotes lithification of the seafloor through precipitation of a variety of mineral species. Most important is the microbial utilization of hydrocarbons and precipitation of 13C-depleted Ca-Mg carbonates as by-products. These carbonates have δ 13C values that range between -18% to -55% (PDB), suggesting mixed carbon sources from crude oil to biogenic methane. The 13C-depleted carbonates form mounds and hardgrounds that occur over the full depth range of the slope. Mounded carbonates can have relief of up to 30 m, but mounds of 5-10 m relief are most common at sites thus far investigated. Mound-building carbonates are mixed mineral phases of aragonite, Mg-calcite, and dolomite with Mg-calcite being the most common. Barite is another product that is precipitated from mineral-rich fluids that arrive at the seafloor in low-to-moderate seep rate settings. However, barite precipitation is not as pervasive as that of 13C-depleted carbonates. The Gulf's intermediate flux settings seem best exemplified by areas where gas hydrates occur at the seafloor or in the very shallow subsurface. Intermediate flux environments display considerable variability with regard to surficial geology and on a local scale have elements of both rapid and slow flux settings. However, the intermediate flux environments appear to have the unique set of conditions necessary to support and sustain densely populated communities of chemosynthetic organisms. Since most of these areas are associated with faulting at the edges of intraslope basins, surficial or shallow subsurface gas hydrates (accessible by piston coring) are oriented along these faults and not in broad areas characterized by distinct bottom simulating reflectors (BSRs) as is the case in many simpler geologic settings. These shallow gas hydrates are composed of a complex mixture of biogenic-thermogenic methane and other thermogenic gases. Slight variations in near-bottom water temperature resulting from a variety of natural oceanographic processes cause gas hydrate dissociation and out-gassing resulting in the degradation to disappearnace of surficial gas hydrate mounds.

  14. Rheb may complex with RASSF1A to coordinate Hippo and TOR signaling.

    PubMed

    Nelson, Nicholas; Clark, Geoffrey J

    2016-06-07

    The TOR pathway is a vital component of cellular homeostasis that controls the synthesis of proteins, nucleic acids and lipids. Its core is the TOR kinase. Activation of the TOR pathway suppresses autophagy, which plays a vital but complex role in tumorigenesis. The TOR pathway is regulated by activation of the Ras-related protein Rheb, which can bind mTOR. The Hippo pathway is a major growth control module that regulates cell growth, differentiation and apoptosis. Its core consists of an MST/LATS kinase cascade that can be activated by the RASSF1A tumor suppressor. The TOR and Hippo pathways may be coordinately regulated to promote cellular homeostasis. However, the links between the pathways remain only partially understood. We now demonstrate that in addition to mTOR regulation, Rheb also impacts the Hippo pathway by forming a complex with RASSF1A. Using stable clones of two human lung tumor cell lines (NCI-H1792 and NCI-H1299) with shRNA-mediated silencing or ectopic overexpression of RASSF1A, we show that activated Rheb stimulates the Hippo pathway, but is suppressed in its ability to stimulate the TOR pathway. Moreover, by selectively labeling autophagic vacuoles we show that RASSF1A inhibits the ability of Rheb to suppress autophagy and enhance cell growth. Thus, we identify a new connection that impacts coordination of Hippo and TOR signaling. As RASSF1A expression is frequently lost in human tumors, the RASSF1A status of a tumor may impact not just its Hippo pathway status, but also its TOR pathway status.

  15. Evaluation of Model Microphysics Within Precipitation Bands of Extratropical Cyclones

    NASA Technical Reports Server (NTRS)

    Colle, Brian A.; Yu, Ruyi; Molthan, Andrew L.; Nesbitt, Steven

    2014-01-01

    It is hypothesized microphysical predictions have greater uncertainties/errors when there are complex interactions that result from mixed phased processes like riming. Use Global Precipitation Measurement (GPM) Mission ground validation studies in Ontario, Canada to verify and improve parameterizations. The WRF realistically simulated the warm frontal snowband at relatively short lead times (1014 h). The snowband structire is sensitive to the microphysical parameterization used in WRF. The Goddard and SBUYLin most realistically predicted the band structure, but overpredicted snow content. The double moment Morrison scheme best produced the slope of the snow distribution, but it underpredicted the intercept. All schemes and the radar derived (which used dry snow ZR) underpredicted the surface precipitation amount, likely because there was more cloud water than expected. The Morrison had the most cloud water and the best precipitation prediction of all schemes.

  16. Habitat complexity influences fine scale hydrological processes and the incidence of stormwater runoff in managed urban ecosystems.

    PubMed

    Ossola, Alessandro; Hahs, Amy Kristin; Livesley, Stephen John

    2015-08-15

    Urban ecosystems have traditionally been considered to be pervious features of our cities. Their hydrological properties have largely been investigated at the landscape scale and in comparison with other urban land use types. However, hydrological properties can vary at smaller scales depending upon changes in soil, surface litter and vegetation components. Management practices can directly and indirectly affect each of these components and the overall habitat complexity, ultimately affecting hydrological processes. This study aims to investigate the influence that habitat components and habitat complexity have upon key hydrological processes and the implications for urban habitat management. Using a network of urban parks and remnant nature reserves in Melbourne, Australia, replicate plots representing three types of habitat complexity were established: low-complexity parks, high-complexity parks, and high-complexity remnants. Saturated soil hydraulic conductivity in low-complexity parks was an order of magnitude lower than that measured in the more complex habitat types, due to fewer soil macropores. Conversely, soil water holding capacity in low-complexity parks was significantly higher compared to the two more complex habitat types. Low-complexity parks would generate runoff during modest precipitation events, whereas high-complexity parks and remnants would be able to absorb the vast majority of rainfall events without generating runoff. Litter layers on the soil surface would absorb most of precipitation events in high-complexity parks and high-complexity remnants. To minimize the incidence of stormwater runoff from urban ecosystems, land managers could incrementally increase the complexity of habitat patches, by increasing canopy density and volume, preserving surface litter and maintaining soil macropore structure. Copyright © 2015 Elsevier Ltd. All rights reserved.

  17. PerSubs: A Graph-Based Algorithm for the Identification of Perturbed Subpathways Caused by Complex Diseases.

    PubMed

    Vrahatis, Aristidis G; Rapti, Angeliki; Sioutas, Spyros; Tsakalidis, Athanasios

    2017-01-01

    In the era of Systems Biology and growing flow of omics experimental data from high throughput techniques, experimentalists are in need of more precise pathway-based tools to unravel the inherent complexity of diseases and biological processes. Subpathway-based approaches are the emerging generation of pathway-based analysis elucidating the biological mechanisms under the perspective of local topologies onto a complex pathway network. Towards this orientation, we developed PerSub, a graph-based algorithm which detects subpathways perturbed by a complex disease. The perturbations are imprinted through differentially expressed and co-expressed subpathways as recorded by RNA-seq experiments. Our novel algorithm is applied on data obtained from a real experimental study and the identified subpathways provide biological evidence for the brain aging.

  18. Microbial response to modified precipitation patterns in tallgrass prairie soil: molecular mechanisms, activity rates and organic matter dynamics

    NASA Astrophysics Data System (ADS)

    Zeglin, L. H.; David, M.; Bottomley, P.; Hettich, R. L.; Jansson, J.; Jumpponen, A.; Rice, C. W.; Tringe, S.; VerBerkmoes, N. C.; Myrold, D.

    2011-12-01

    A significant amount of carbon (C) is processed and stored in prairie soils: grasslands cover 6.1-7.4% of the earth's land surface and hold 7.3-11.4% of global soil C. Global change models predict that the future precipitation regime across the North American Great Plains will entail less frequent but larger rainfall events. The response of prairie soil microbial C processing and allocation to this scenario of higher hydrologic variability is not known, but will be a key determiner of the future capacity for prairie soil C sequestration. We are approaching this problem by assessing soil microbial function (respiration, C utilization efficiency, extracellular enzyme activity) and molecular indicators of dominant C allocation pathways (soil transcriptome, proteome and metabolome) under ambient and experimentally modified precipitation regimes. The rainfall manipulation plots (RaMPs) at the Konza Prairie Long-Term Ecological Research (LTER) site in eastern Kansas, USA is a replicated field manipulation of the magnitude and frequency of natural precipitation that was established in 1998. We collected soil before, during and after a rainfall event in both ambient and modified precipitation treatments and measured the microbial response. Microbial respiration doubled in both treatments during the water addition, and cellobiohydrolase enzyme potential activity (a catalyst of cellulose hydrolysis) increased slightly, but no significant effect of altered precipitation treatment has emerged. The fungal and bacterial ribosomal gene composition was also similar between precipitation treatments. Although pools of genes and extracellular enzymes may be relatively static during short-term dynamic conditions, transcript and intracellular protein abundances may be more indicative of the active microbial metabolic response to rapid shifts in soil moisture. Thus, analysis of transcript and protein composition is underway. In addition, we have implemented a series of lab experiments to optimize and link transcript and protein recovery and analysis procedures using the model soil bacterium Arthrobacter chlorophenicolus strain A6 (ArtchA6). Konza prairie soil was inoculated with ArchA6 and incubated for 72 h with no supplemental C, with acetate or with 4-chlorophenol (a xenobiotic compound that ArtchA6 can utilize as its sole C source), then RNA and protein were extracted from the soil. Quantitatively representative recovery of ArtchA6 genes, rRNA, mRNA and protein was successful. The ratio of ArtchA6 isocitrate lyase (icl, indicative of 2-C metabolism) to succinyl CoA synthetase (suCAB, indicative of total respiratory activity) transcript was highest in soils amended with acetate. Proteomic signatures were distinct in soils with different supplemental C sources. This experiment confirms our capability of recovering transcript and protein from the study soil and of identifying the functional molecules representative of distinct C metabolism pathways.

  19. Oxygen Isotope Signatures of Biogenic Manganese(III/IV) Oxides

    NASA Astrophysics Data System (ADS)

    Sutherland, K. M.; Hansel, C. M.; Wankel, S. D.

    2015-12-01

    Manganese (Mn) oxide minerals are pervasive throughout a number of surface earth environments as rock varnishes, ferromanganese nodules, crusts around deep-sea vents, and cave deposits among many other marine, freshwater, and terrestrial deposits. Mn(III,IV) oxides are also among the strongest sorbents and oxidants in surface earth environments and are crucial to understanding the fate of organic matter in sedimentary environments. The precipitation of Mn oxide minerals proceeds via both abiotic and biotic oxidation pathways, the latter due to the indirect or direct activity of Mn(II)- oxidizing microorganisms, including bacteria and fungi. Although the precipitation of Mn oxides is believed to be primarily controlled by Mn(II)-oxidizing organisms in most surface earth environments, confirmation of this generally held notion has remained illusive and limits our understanding of their formation on Earth and beyond (e.g., Mars). Previous work provided evidence that O atom incorporation by specific Mn oxidation pathways may exhibit unique and predictable isotopic fractionation. In this study, we expand upon this evidence by measuring the oxygen isotope signature of several biogenic and abiogenic Mn oxide minerals synthesized under a range of oxygen-18 labeled water. These results allow us to determine the relative amount oxygen atoms derived from water and molecular oxygen that are incorporated in the oxide and shed light on corresponding isotope fractionation factors. Additionally, we show that, once precipitated, Mn oxide isotope signatures are robust with respect to aqueous oxygen isotope exchange. The study provides a foundation on which to study and interpret Mn oxides in natural environments and determine which environmental controls may govern Mn(II) oxidation.

  20. Formation, aggregation and reactivity of amorphous ferric oxyhydroxides on dissociation of Fe(III)-organic complexes in dilute aqueous suspensions

    NASA Astrophysics Data System (ADS)

    Bligh, Mark W.; Waite, T. David

    2010-10-01

    While chemical reactions that take place at the surface of amorphous ferric oxides (AFO) are known to be important in aquatic systems, incorporation of these reactions into kinetic models is hindered by a lack of ability to reliably quantify the reactivity of the surface and the changes in reactivity that occur over time. Long term decreases in the reactivity of iron oxides may be considered to result from changes in the molecular structure of the solid, however, over shorter time scales where substantial aggregation may occur, the mechanisms of reactivity loss are less clear. Precipitation of AFO may be described as a combination of homogeneous and heterogeneous reactions, however, despite its potentially significant role, the latter reaction is usually neglected in kinetic models of aquatic processes. Here, we investigate the role of AFO in scavenging dissolved inorganic ferric (Fe(III)) species (Fe') via the heterogeneous precipitation reaction during the net dissociation of organically complexed Fe(III) in seawater. Using sulfosalicylic acid (SSA) as a model ligand, AFO was shown to play a significant role in inducing the net dissociation of the Fe-SSA complexes with equations describing both the heterogeneous precipitation reaction and the aging of AFO being required to adequately describe the experimental data. An aggregation based mechanism provided a good description of AFO aging over the short time scale of the experiments. The behaviour of AFO described here has implications for the bioavailability of iron in natural systems as a result of reactions involving AFO which are recognised to occur over time scales of minutes, including adsorption of Fe' and AFO dissolution, precipitation and ageing.

  1. Kinetic and mechanism studies of the adsorption of lead onto waste cow bone powder (WCBP) surfaces.

    PubMed

    Cha, Jihoon; Cui, Mingcan; Jang, Min; Cho, Sang-Hyun; Moon, Deok Hyun; Khim, Jeehyeong

    2011-01-01

    This study examines the adsorption isotherms, kinetics and mechanisms of Pb²(+) sorption onto waste cow bone powder (WCBP) surfaces. The concentrations of Pb²(+) in the study range from 10 to 90 mg/L. Although the sorption data follow the Langmuir and Freundlich isotherm, a detailed examination reveals that surface sorption or complexation and co-precipitation are the most important mechanisms, along with possibly ion exchange and solid diffusion also contributing to the overall sorption process. The co-precipitation of Pb²(+) with the calcium hydroxyapatite (Ca-HAP) is implied by significant changes in Ca²(+) and PO₄³⁻ concentrations during the metal sorption processes. The Pb²(+) sorption onto the WCBP surface by metal complexation with surface functional groups such as ≡ POH. The major metal surface species are likely to be ≡ POPb(+). The sorption isotherm results indicated that Pb²(+) sorption onto the Langmuir and Freundlich constant q(max) and K( F ) is 9.52 and 8.18 mg g⁻¹, respectively. Sorption kinetics results indicated that Pb²(+) sorption onto WCBP was pseudo-second-order rate constants K₂ was 1.12 g mg⁻¹ h⁻¹. The main mechanism is adsorption or surface complexation (≡POPb(+): 61.6%), co-precipitation or ion exchange [Ca₃(.)₉₃ Pb₁(.)₀₇ (PO₄)₃ (OH): 21.4%] and other precipitation [Pb 50 mg L⁻¹ and natural pH: 17%). Sorption isotherms showed that WCBP has a much higher Pb²(+) removal rate in an aqueous solution; the greater capability of WCBP to remove aqueous Pb²(+) indicates its potential as another promising way to remediate Pb²(+)-contaminated media.

  2. Intercomparison of aerosol-cloud-precipitation interactions in stratiform orographic mixed-phase clouds

    NASA Astrophysics Data System (ADS)

    Muhlbauer, A.; Hashino, T.; Xue, L.; Teller, A.; Lohmann, U.; Rasmussen, R. M.; Geresdi, I.; Pan, Z.

    2010-04-01

    Anthropogenic aerosols serve as a source of both cloud condensation nuclei (CCN) and ice nuclei (IN) and affect microphysical properties of clouds. Increasing aerosol number concentrations is hypothesized to retard the cloud droplet collision/coalescence and the riming in mixed-phase clouds, thereby decreasing orographic precipitation. This study presents results from a model intercomparison of 2-D simulations of aerosol-cloud-precipitation interactions in stratiform orographic mixed-phase clouds. The sensitivity of orographic precipitation to changes in the aerosol number concentrations is analyzed and compared for various dynamical and thermodynamical situations. Furthermore, the sensitivities of microphysical processes such as collision/coalescence, aggregation and riming to changes in the aerosol number concentrations are evaluated and compared. The participating models are the Consortium for Small-Scale Modeling's (COSMO) model with bulk-microphysics, the Weather Research and Forecasting (WRF) model with bin-microphysics and the University of Wisconsin modeling system (UWNMS) with a spectral ice-habit prediction microphysics scheme. All models are operated on a cloud-resolving scale with 2 km horizontal grid spacing. The results of the model intercomparison suggest that the sensitivity of orographic precipitation to aerosol modifications varies greatly from case to case and from model to model. Neither a precipitation decrease nor a precipitation increase is found robustly in all simulations. Qualitative robust results can only be found for a subset of the simulations but even then quantitative agreement is scarce. Estimates of the second indirect aerosol effect on orographic precipitation are found to range from -19% to 0% depending on the simulated case and the model. Similarly, riming is shown to decrease in some cases and models whereas it increases in others which implies that a decrease in riming with increasing aerosol load is not a robust result. Furthermore, it is found that neither a decrease in cloud droplet coalescence nor a decrease in riming necessarily implies a decrease in precipitation due to compensation effects by other microphysical pathways. The simulations suggest that mixed-phase conditions play an important role in reducing the overall susceptibility of clouds and precipitation with respect to changes in the aerosols number concentrations. As a consequence the indirect aerosol effect on precipitation is suggested to be less pronounced or even inverted in regions with high terrain (e.g., the Alps or Rocky Mountains) or in regions where mixed-phase microphysics climatologically plays an important role for orographic precipitation.

  3. Variation of surficial soil hydraulic properties across land uses in the southern Blue Ridge Mountains, North Carolina, USA

    Treesearch

    Katie Price; C. Rhett Jackson; Albert J. Parker

    2010-01-01

    A full understanding of hydrologic response to human impact requires assessment of land-use impacts on key soil physical properties such as saturated hydraulic conductivity, bulk density, and moisture retention. Such properties have been shown to affect watershed hydrology by influencing pathways and transmission rates of precipitation to stream networks. Human land...

  4. Physical hydrology and the effects of forest harvesting in the Pacific Northwest: a review.

    Treesearch

    R. Dan Moore; S.M. Wondzell

    2005-01-01

    The Pacific Northwest encompasses a range of hydrologic regimes that can be broadly characterized as either coastal (where rain and rain on snow are dominant) or interior (where snowmelt is dominant). Forest harvesting generally increases the fraction of precipitation that is available to become streamflow, increases rates of snowmelt, and modifies the runoff pathways...

  5. Regional patterns of postwildfire streamflow response in the Western United States: The importance of scale-specific connectivity

    Treesearch

    Dennis W. Hallema; Ge Sun; Kevin D. Bladon; Steven P. Norman; Peter V. Caldwell; Yongqiang Liu; Steven G. McNulty

    2017-01-01

    Wildfires can impact streamflow by modifying net precipitation, infiltration, evapotranspiration, snowmelt, and hillslope run‐off pathways. Regional differences in fire trends and postwildfire streamflow responses across the conterminous United States have spurred concerns about the impact on streamflow in forests that serve as water resource areas. This is notably the...

  6. Reaction pathways towards the formation of dolomite-analogues at ambient conditions

    NASA Astrophysics Data System (ADS)

    Pimentel, Carlos; Pina, Carlos M.

    2016-04-01

    In this paper we present results of a study of the crystallisation behaviour of the dolomite-analogues norsethite and PbMg(CO3)2 at room temperature and atmospheric pressure. Whereas precipitation of norsethite was previously obtained by mixing solutions (Hood et al., 1974; Pimentel and Pina, 2014a,b), we report, for the first time, the synthesis of PbMg(CO3)2 by using the same method. The formation of both phases was promoted by ageing slurries for periods of time ranging from a few days (norsethite) up to 6 months (PbMg(CO3)2). The crystallisation of both norsethite and PbMg(CO3)2 occurs by sequences of dissolution-precipitation reactions involving several amorphous and crystalline precursor phases, which were identified and characterised by X-ray diffraction and scanning electron microscopy. Depending on the initial composition and Ba:Mg and Pb:Mg ratios in the slurries, different precursors and reaction kinetics were observed. This demonstrates the existence of different reaction pathways towards the formation of the investigated dolomite-analogues. Our experimental results provide new insights into the possible mechanisms of formation of dolomite and other double carbonates in nature.

  7. Possible Association of Ferrous Phosphates and Ferric Sulfates in S-rich Soil on Mars

    NASA Astrophysics Data System (ADS)

    Mao, J.; Schroeder, C.; Haderlein, S.

    2012-12-01

    NASA Mars Exploration Rover (MER) Spirit explored Gusev Crater to look for signs of ancient aqueous activity, assess past environmental conditions and suitability for life. Spirit excavated light-toned, S-rich soils at several locations. These are likely of hydrothermal, possibly fumarolic origin. At a location dubbed Paso Robles the light-toned soil was also rich in P - a signature from surrounding rock. While S is mainly bound in ferric hydrated sulfates [1], the mineralogy of P is ill-constrained [2]. P is a key element for life and its mineralogy constrains its availability. Ferrous phases observed in Paso Robles Mössbauer spectra may represent olivine and pyroxene from surrounding basaltic soil [1] or ferrous phosphate minerals [3]. Phosphate is well-known to complex and stabilize Fe 2+ against oxidation to Fe 3+ . Schröder et al. [3] proposed a formation pathway of ferrous phosphate/ferric sulfate associations: sulfuric acid reacts with basalt containing apatite, forming CaSO4 and phosphoric acid. The phosphoric and/or excess sulfuric acid reacts with olivine, forming Fe2+-phosphate and sulfate. The phosphate is less soluble and precipitates. Ferrous sulfate remains in solution and is oxidized as pH increases. To verify this pathway, we dissolved Fe2+-chloride and Na-phosphate salts in sulfuric acid inside an anoxic glovebox. The solution was titrated to pH 6 by adding NaOH when a first precipitate formed, which was ferrous phosphate according to Mössbauer spectroscopy (MB). At that point the solution was removed from the glovebox and allowed to evaporate in the presence of atmospheric oxygen, leading to the oxidation of Fe2+. The evaporation rate was controlled by keeping the suspensions at different temperatures; pH was monitored during the evaporation process. The final precipitates were analyzed by MB and X-Ray Fluorescence (XRF), comparable to MER MB and Alpha Particle X-ray Spectrometer instrument datasets, and complementary techniques such as X-ray diffraction. Fourier Transform Infrared spectroscopy measurements to compare to MER miniature thermal emission spectrometer data are planned. We observed differences depending on the heat source during evaporation. The closest match to Martian data on the basis of Mössbauer spectra was achieved with a suspension evaporated at 80°C on a hot plate, i.e. heated from below with a temperature gradient in the bottle. The Fe2+/FeT ratio matched, and ferrous phases were all phosphate. When heated in a water bath, i.e. without a temperature gradient in the bottle, Fe2+/FeT ratios increased and ferrous sulfates precipitated also. These results indicate that the Martian light-toned S-rich deposits formed by evaporation on the surface where temperature gradients would be expected rather than underground. They confirm that ferrous phosphate/ferric sulfate associations are possible on Mars and could be preserved in the oxygen-free Martian atmosphere. References: [1] Morris et al., J.Geophys. Res. 111 (2006) E02S13; [2] Ming et al., J. Geophys. Res. 111 (2006) E02S12; [3] Schröder et al., GSA Annual Meeting 2008, Paper No. 171-3.

  8. Enriched pathways for major depressive disorder identified from a genome-wide association study.

    PubMed

    Kao, Chung-Feng; Jia, Peilin; Zhao, Zhongming; Kuo, Po-Hsiu

    2012-11-01

    Major depressive disorder (MDD) has caused a substantial burden of disease worldwide with moderate heritability. Despite efforts through conducting numerous association studies and now, genome-wide association (GWA) studies, the success of identifying susceptibility loci for MDD has been limited, which is partially attributed to the complex nature of depression pathogenesis. A pathway-based analytic strategy to investigate the joint effects of various genes within specific biological pathways has emerged as a powerful tool for complex traits. The present study aimed to identify enriched pathways for depression using a GWA dataset for MDD. For each gene, we estimated its gene-wise p value using combined and minimum p value, separately. Canonical pathways from the Kyoto Encyclopedia of Genes and Genomes (KEGG) and BioCarta were used. We employed four pathway-based analytic approaches (gene set enrichment analysis, hypergeometric test, sum-square statistic, sum-statistic). We adjusted for multiple testing using Benjamini & Hochberg's method to report significant pathways. We found 17 significantly enriched pathways for depression, which presented low-to-intermediate crosstalk. The top four pathways were long-term depression (p⩽1×10-5), calcium signalling (p⩽6×10-5), arrhythmogenic right ventricular cardiomyopathy (p⩽1.6×10-4) and cell adhesion molecules (p⩽2.2×10-4). In conclusion, our comprehensive pathway analyses identified promising pathways for depression that are related to neurotransmitter and neuronal systems, immune system and inflammatory response, which may be involved in the pathophysiological mechanisms underlying depression. We demonstrated that pathway enrichment analysis is promising to facilitate our understanding of complex traits through a deeper interpretation of GWA data. Application of this comprehensive analytic strategy in upcoming GWA data for depression could validate the findings reported in this study.

  9. Phosphorylation of human INO80 is involved in DNA damage tolerance

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kato, Dai; Waki, Mayumi; Umezawa, Masaki

    Highlights: Black-Right-Pointing-Pointer Depletion of hINO80 significantly reduced PCNA ubiquitination. Black-Right-Pointing-Pointer Depletion of hINO80 significantly reduced nuclear dots intensity of RAD18 after UV irradiation. Black-Right-Pointing-Pointer Western blot analyses showed phosphorylated hINO80 C-terminus. Black-Right-Pointing-Pointer Overexpression of phosphorylation mutant hINO80 reduced PCNA ubiquitination. -- Abstract: Double strand breaks (DSBs) are the most serious type of DNA damage. DSBs can be generated directly by exposure to ionizing radiation or indirectly by replication fork collapse. The DNA damage tolerance pathway, which is conserved from bacteria to humans, prevents this collapse by overcoming replication blockages. The INO80 chromatin remodeling complex plays an important role in themore » DNA damage response. The yeast INO80 complex participates in the DNA damage tolerance pathway. The mechanisms regulating yINO80 complex are not fully understood, but yeast INO80 complex are necessary for efficient proliferating cell nuclear antigen (PCNA) ubiquitination and for recruitment of Rad18 to replication forks. In contrast, the function of the mammalian INO80 complex in DNA damage tolerance is less clear. Here, we show that human INO80 was necessary for PCNA ubiquitination and recruitment of Rad18 to DNA damage sites. Moreover, the C-terminal region of human INO80 was phosphorylated, and overexpression of a phosphorylation-deficient mutant of human INO80 resulted in decreased ubiquitination of PCNA during DNA replication. These results suggest that the human INO80 complex, like the yeast complex, was involved in the DNA damage tolerance pathway and that phosphorylation of human INO80 was involved in the DNA damage tolerance pathway. These findings provide new insights into the DNA damage tolerance pathway in mammalian cells.« less

  10. Controls on shallow landslide initiation: Diverse hydrologic pathways, 3D failure geometries, and unsaturated soil suctions

    NASA Astrophysics Data System (ADS)

    Reid, Mark; Iverson, Richard; Brien, Dianne; Iverson, Neal; LaHusen, Richard; Logan, Matthew

    2017-04-01

    Shallow landslides and ensuing debris flows are a common hazard worldwide, yet forecasting their initiation at a specific site is challenging. These challenges arise, in part, from diverse near-surface hydrologic pathways under different wetting conditions, 3D failure geometries, and the effects of suction in partially saturated soils. Simplistic hydrologic models typically used for regional hazard assessment disregard these complexities. As an alterative to field studies where the effects of these governing factors can be difficult to isolate, we used the USGS debris-flow flume to conduct controlled, field-scale landslide initiation experiments. Using overhead sprinklers or groundwater injectors on the flume bed, we triggered failures using three different wetting conditions: groundwater inflow from below, prolonged moderate-intensity precipitation, and bursts of high-intensity precipitation. Failures occurred in 6 m3 (0.65-m thick and 2-m wide) prisms of loamy sand on a 31° slope; these field-scale failures enabled realistic incorporation of nonlinear scale-dependent effects such as soil suction. During the experiments, we monitored soil deformation, variably saturated pore pressures, and moisture changes using ˜50 sensors sampling at 20 Hz. From ancillary laboratory tests, we determined shear strength, saturated hydraulic conductivities, and unsaturated moisture retention characteristics. The three different wetting conditions noted above led to different hydrologic pathways and influenced instrumental responses and failure timing. During groundwater injection, pore-water pressures increased from the bed of the flume upwards into the sediment, whereas prolonged moderate infiltration wet the sediment from the ground surface downward. In both cases, pore pressures acting on the impending failure surface slowly rose until abrupt failure. In contrast, a burst of intense sprinkling caused rapid failure without precursory development of widespread positive pore pressures. Using coupled 2D variably saturated groundwater flow modeling and 3D limit-equilibrium analyses, we simulated the observed hydrologic behaviors and the time evolution of changes in factors of safety. Our measured parameters successfully reproduced pore pressure observations without calibration. We also quantified the mechanical effects of 3D geometry and unsaturated soil suction on stability. Although suction effects appreciably increased the stability of drier sediment, they were dampened (to <10% increase) in wetted sediment. 3D geometry effects from the lateral margins consistently increased factors of safety by >20% in wet or dry sediment. Importantly, both 3D and suction effects enabled more accurate simulation of failure times. Without these effects, failure timing and/or back-calculated shear strengths would be markedly incorrect. Our results indicate that simplistic models could not consistently predict the timing of slope failure given diverse hydrologic pathways. Moreover, high frequency monitoring (with sampling periods < ˜60 s) would be required to measure and interpret the effects of rapid hydrologic triggers, such as intense rain bursts.

  11. Divergent pathways in the reaction of Fischer carbenes and palladium.

    PubMed

    López-Alberca, María P; Mancheño, María J; Fernandez, Israel; Gómez-Gallego, Mar; Sierra, Miguel A; Torres, Rosario

    2007-04-26

    [reaction: see text] The Pd-catalyzed reaction of beta-arylaminochromium(0) carbene complexes produces by transmetalation the first isolated and X-ray structurally characterized bis-Pd(II) carbene complex, as well as other alternative reaction pathways, such as the oxidative addition-transmetalation sequence, not seen before in this chemistry.

  12. Quantification of a greenhouse hydrologic cycle from equatorial to polar latitudes: The mid-Cretaceous water bearer revisited

    USGS Publications Warehouse

    Suarez, M.B.; Gonzalez, Luis A.; Ludvigson, Greg A.

    2011-01-01

    This study aims to investigate the global hydrologic cycle during the mid-Cretaceous greenhouse by utilizing the oxygen isotopic composition of pedogenic carbonates (calcite and siderite) as proxies for the oxygen isotopic composition of precipitation. The data set builds on the Aptian-Albian sphaerosiderite ??18O data set presented by Ufnar et al. (2002) by incorporating additional low latitude data including pedogenic and early meteoric diagenetic calcite ??18O. Ufnar et al. (2002) used the proxy data derived from the North American Cretaceous Western Interior Basin (KWIB) in a mass balance model to estimate precipitation-evaporation fluxes. We have revised this mass balance model to handle sphaerosiderite and calcite proxies, and to account for longitudinal travel by tropical air masses. We use empirical and general circulation model (GCM) temperature gradients for the mid-Cretaceous, and the empirically derived ??18O composition of groundwater as constraints in our mass balance model. Precipitation flux, evaporation flux, relative humidity, seawater composition, and continental feedback are adjusted to generate model calculated groundwater ??18O compositions (proxy for precipitation ??18O) that match the empirically-derived groundwater ??18O compositions to within ??0.5???. The model is calibrated against modern precipitation data sets.Four different Cretaceous temperature estimates were used: the leaf physiognomy estimates of Wolfe and Upchurch (1987) and Spicer and Corfield (1992), the coolest and warmest Cretaceous estimates compiled by Barron (1983) and model outputs from the GENESIS-MOM GCM by Zhou et al. (2008). Precipitation and evaporation fluxes for all the Cretaceous temperature gradients utilized in the model are greater than modern precipitation and evaporation fluxes. Balancing the model also requires relative humidity in the subtropical dry belt to be significantly reduced. As expected calculated precipitation rates are all greater than modern precipitation rates. Calculated global average precipitation rates range from 371mm/year to 1196mm/year greater than modern precipitation rates. Model results support the hypothesis that increased rainout produces ??18O-depleted precipitation.Sensitivity testing of the model indicates that the amount of water vapor in the air mass, and its origin and pathway, significantly affect the oxygen isotopic composition of precipitation. Precipitation ??18O is also sensitive to seawater ??18O and enriched tropical seawater was necessary to simulate proxy data (consistent with fossil and geologic evidence for a warmer and evaporatively enriched Tethys). Improved constraints in variables such as seawater ??18O can help improve boundary conditions for mid-Cretaceous climate simulations. ?? 2011 Elsevier B.V.

  13. New insights into hydrosilylation of unsaturated carbon-heteroatom (C═O, C═N) bonds by rhenium(V)-dioxo complexes.

    PubMed

    Huang, Liangfang; Wang, Wenmin; Wei, Xiaoqin; Wei, Haiyan

    2015-04-23

    The hydrosilylation of unsaturated carbon-heteroatom (C═O, C═N) bonds catalyzed by high-valent rhenium(V)-dioxo complex ReO2I(PPh3)2 (1) were studied computationally to determine the underlying mechanism. Our calculations revealed that the ionic outer-sphere pathway in which the organic substrate attacks the Si center in an η(1)-silane rhenium adduct to prompt the heterolytic cleavage of the Si-H bond is the most energetically favorable process for rhenium(V)-dioxo complex 1 catalyzed hydrosilylation of imines. The activation energy of the turnover-limiting step was calculated to be 22.8 kcal/mol with phenylmethanimine. This value is energetically more favorable than the [2 + 2] addition pathway by as much as 10.0 kcal/mol. Moreover, the ionic outer-sphere pathway competes with the [2 + 2] addition mechanism for rhenium(V)-dioxo complex 1 catalyzing the hydrosilylation of carbonyl compounds. Furthermore, the electron-donating group on the organic substrates would induce a better activity favoring the ionic outer-sphere mechanistic pathway. These findings highlight the unique features of high-valent transition-metal complexes as Lewis acids in activating the Si-H bond and catalyzing the reduction reactions.

  14. Ammonia release method for depositing metal oxides

    DOEpatents

    Silver, G.L.; Martin, F.S.

    1994-12-13

    A method is described for depositing metal oxides on substrates which is indifferent to the electrochemical properties of the substrates and which comprises forming ammine complexes containing metal ions and thereafter effecting removal of ammonia from the ammine complexes so as to permit slow precipitation and deposition of metal oxide on the substrates. 1 figure.

  15. PLUTONIUM-CUPFERRON COMPLEX AND METHOD OF REMOVING PLUTONIUM FROM SOLUTION

    DOEpatents

    Potratz, H.A.

    1959-01-13

    A method is presented for separating plutonium from fission products present in solutions of neutronirradiated uranium. The process consists in treating such acidic solutions with cupferron so that the cupferron reacts with the plutonium present to form an insoluble complex. This plutonium cupferride precipitates and may then be separated from the solution.

  16. Chemical mechanism of the Gram stain and synthesis of a new electron-opaque marker for electron microscopy which replaces the iodine mordant of the stain.

    PubMed Central

    Davies, J A; Anderson, G K; Beveridge, T J; Clark, H C

    1983-01-01

    Crystal violet (hexamethyl-para-rosaniline chloride) interacts with aqueous KI-I2 during the Gram stain via a simple metathetical anion exchange to produce a chemical precipitate. There is an apparent 1:1 stoichiometry between anion (I-) and cation (hexamethyl-para-rosaniline+) during the reaction and, since the small chloride anion is replaced by the bulkier iodide, the complex formed becomes insoluble in water. It is this same precipitate which forms in the cellular substance of bacteria (both gram-positive and gram-negative types) and which initiates the Gram reaction. Potassium trichloro(eta 2-ethylene)-platinum(II), as an electronopaque marker for electron microscopy, was chemically synthesized, and it produced an anion in aqueous solution which was compatible with crystal violet for the Gram stain. It interacted with crystal violet in a similar manner as iodide to produce an insoluble complex which was chemically and physically analogous to the dye-iodide precipitate. This platinum anion therefore allows the Gram staining mechanism to be followed by electron microscopy. Images PMID:6195147

  17. Rapid determination of tannins in tanning baths by adaptation of BSA method.

    PubMed

    Molinari, R; Buonomenna, M G; Cassano, A; Drioli, E

    2001-01-01

    A rapid and reproducible method for the determination of tannins in vegetable tanning baths is proposed as a modification of the BSA method for grain tannins existing in literature. The protein BSA was used instead of leather powder employed in the Filter Method, which is adopted in Italy and various others countries of Central Europe. In this rapid method the tannin contents is determined by means a spectrophotometric reading and not by means a gravimetric analysis of the Filter Method. The BSA method, which belongs to mixed methods (which use both precipitation and complexation of tannins), consists of selective precipitation of tannin from a solution containing also non tannins by BSA, the dissolution of precipitate and the quantification of free tannin amount by its complexation with Fe(III) in hydrochloric solutions. The absorbance values, read at 522 nm, have been expressed in terms of tannic acid concentration by using a calibration curve made with standard solutions of tannic acid; these have been correlated with the results obtained by using the Filter Method.

  18. Eu3+ complex of ligand4’-(4-carboxyphenyl)-2,2’:6’,2″-terpyridine as fluorosensor of heavy metals

    NASA Astrophysics Data System (ADS)

    Zulys, A.; Rachmawati, N.

    2017-04-01

    Ligand 4’-(4-carboxyphenyl)-2,2’:6’,2″-terpyridine (2-Hcptpy) has been synthesized by modification of Kröhnke method. The synthesize was performed using aldol condensation reaction. The white precipitate was collected and produced 62% yield (1.062 gr). Ligand 2-Hcptpy has been characterized by FTIR, Elemental analyzer, H-NMR, UV-vis, and UV-DRS spectrometer. It was then reacted with lanthanide group (Eu3+) to form a complex by hydrothermal process. The result of Eu3+ complex was 0.352 gr. of white yellowish precipitate. The application of this research is for the fluorosensor of heavy metals (Pb2+dan Cd2+). The data of fluorescence showed two types of fluorescence, either turn on or turn off fluorosensor. Ligand 2-Hcptpy has an on-off type with the addition of Pb2+ and Cd2+, while complex Eu3+ has two types of fluorosensor. The complex showed turn on-off and turn on-off by addition of Pb2+ and type of turn off by addition of Cd2+. Either ligand or complex, showed fluorescence intensity by adding heavy metals up to concentration 5×10-8 M.

  19. Regional climate change over South Korea projected by the HadGEM2-AO and WRF model chain under RCP emission scenarios

    NASA Astrophysics Data System (ADS)

    Ahn, Joong-Bae; Im, Eun-Soon; Jo, Sera

    2017-04-01

    This study assesses the regional climate projection newly projected within the framework of the national downscaling project in South Korea. The fine-scale climate information (12.5 km) is produced by dynamical downscaling of the HadGEM2-AO global projections forced by the representative concentration pathway (RCP4.5 and 8.5) scenarios using the Weather Research and Forecasting (WRF) modeling system. Changes in temperature and precipitation in terms of long-term trends, daily characteristics and extremes are presented by comparing two 30 yr periods (2041-2070 vs. 2071-2100). The temperature increase presents a relevant trend, but the degree of warming varies in different periods and emission scenarios. While the temperature distribution from the RCP8.5 projection is continuously shifted toward warmer conditions by the end of the 21st century, the RCP4.5 projection appears to stabilize warming in accordance with emission forcing. This shift in distribution directly affects the magnitude of extremes, which enhances extreme hot days but reduces extreme cold days. Precipitation changes, however, do not respond monotonically to emission forcing, as they exhibit less sensitivity to different emission scenarios. An enhancement of high intensity precipitation and a reduction of weak intensity precipitation are discernible, implying an intensified hydrologic cycle. Changes in return levels of annual maximum precipitation suggest an increased probability of extreme precipitation with 20 yr and 50 yr return periods. Acknowledgement : This work was funded by the Korea Meteorological Administration Research and Development Program under grant KMIPA 2015-2081

  20. Transient Climate Impacts for Scenarios of Aerosol Emissions from Asia: A Story of Coal versus Gas

    NASA Astrophysics Data System (ADS)

    Grandey, B. S.; Cheng, H.; Wang, C.

    2014-12-01

    Projections of anthropogenic aerosol emissions are uncertain. In Asia, it is possible that emissions may increase if business continues as usual, with economic growth driving an increase in coal burning. But it is also possible that emissions may decrease rapidly due to the widespread adoption of cleaner technology or a shift towards non-coal fuels, such as natural gas. In this study, the transient climate impacts of three aerosol emissions scenarios are investigated: an RCP4.5 (Representative Concentration Pathway 4.5) control; a scenario with reduced Asian anthropogenic aerosol emissions; and a scenario with enhanced Asian anthropogenic aerosol emissions. A coupled atmosphere-ocean configuration of CESM (Community Earth System Model), including CAM5 (Community Atmosphere Model version 5), is used. Enhanced Asian aerosol emissions are found to delay global mean warming by one decade at the end of the century. Aerosol-induced suppression of the East Asian and South Asian summer monsoon precipitation occurs. The enhanced Asian aerosol emissions also remotely impact precipitation in other parts of the world: over the Sahel, West African monsoon precipitation is suppressed; and over Australia, austral summer monsoon precipitation is enhanced. These remote impacts on precipitation are associated with a southward shift of the ITCZ. The aerosol-induced sea surface temperature (SST) response appears to play an important role in the precipitation changes over South Asia and Australia, but not over East Asia. These results indicate that energy production in Asia, through the consequent aerosol emissions and associated radiative effects, might significantly influence future climate both locally and globally.

  1. The Effect of Spatial Aggregation on the Skill of Seasonal Precipitation Forecasts.

    NASA Astrophysics Data System (ADS)

    Gong, Xiaofeng; Barnston, Anthony G.; Ward, M. Neil

    2003-09-01

    Skillful forecasts of 3-month total precipitation would be useful for decision making in hydrology, agriculture, public health, and other sectors of society. However, with some exceptions, the skill of seasonal precipitation outlooks is modest, leaving uncertainty in how to best make use of them. Seasonal precipitation forecast skill is generally lower than the skill of forecasts for temperature or atmospheric circulation patterns for the same location and time. This is attributable to the smaller-scale, more complex physics of precipitation, resulting in its `noisier' and hence less predictable character. By contrast, associated temperature and circulation patterns are larger scale, in keeping with the anomalous boundary conditions (e.g., sea surface temperature) that often give rise to them.Using two atmospheric general circulation models forced by observed sea surface temperature anomalies, the skill of simulations of total seasonal precipitation is examined as a function of the size of the spatial domain over which the precipitation total is averaged. Results show that spatial aggregation increases skill and, by the skill measures used here, does so to a greater extent for precipitation than for temperature. Corroborative results are presented in an observational framework at smaller spatial scales for gauge rainfalls in northeast Brazil.The findings imply that when seasonal forecasts for precipitation are issued, the accompanying guidance on their expected skills should explicitly specify to which spatial aggregation level the skills apply. Information about skills expected at other levels of aggregation should be supplied for users who may work at such levels.

  2. Analysis of long term trends of precipitation estimates acquired using radar network in Turkey

    NASA Astrophysics Data System (ADS)

    Tugrul Yilmaz, M.; Yucel, Ismail; Kamil Yilmaz, Koray

    2016-04-01

    Precipitation estimates, a vital input in many hydrological and agricultural studies, can be obtained using many different platforms (ground station-, radar-, model-, satellite-based). Satellite- and model-based estimates are spatially continuous datasets, however they lack the high resolution information many applications often require. Station-based values are actual precipitation observations, however they suffer from their nature that they are point data. These datasets may be interpolated however such end-products may have large errors over remote locations with different climate/topography/etc than the areas stations are installed. Radars have the particular advantage of having high spatial resolution information over land even though accuracy of radar-based precipitation estimates depends on the Z-R relationship, mountain blockage, target distance from the radar, spurious echoes resulting from anomalous propagation of the radar beam, bright band contamination and ground clutter. A viable method to obtain spatially and temporally high resolution consistent precipitation information is merging radar and station data to take advantage of each retrieval platform. An optimally merged product is particularly important in Turkey where complex topography exerts strong controls on the precipitation regime and in turn hampers observation efforts. There are currently 10 (additional 7 are planned) weather radars over Turkey obtaining precipitation information since 2007. This study aims to optimally merge radar precipitation data with station based observations to introduce a station-radar blended precipitation product. This study was supported by TUBITAK fund # 114Y676.

  3. Estimation of equilibrium surface precipitation constants for trivalent metal sorption onto hydrous ferric oxide and calcite

    NASA Astrophysics Data System (ADS)

    Ragavan, Anpalaki J.; Adams, Dean V.

    2009-06-01

    Equilibrium constants for modeling surface precipitation of trivalent metal cations ( M) onto hydrous ferric oxide and calcite were estimated from linear correlations of standard state Gibbs free energies of formation, ( ΔGf,MvX(ss)0) of the surface precipitates. The surface precipitation reactions were derived from Farley et. al. [K.J. Farley, D.A. Dzombak, F.M.M. Morel, J. Colloid Interface Sci. 106 (1985) 226] surface precipitation model, which are based on surface complexation model coupled with solid solution representation for surface precipitation on the solid surface. The ΔGf,MvX(ss)0 values were correlated through the following linear free energy relations ΔGf,M(OH)3(ss)0-791.70r=0.1587ΔGn,M0-1273.07 and ΔGf,M2(CO3)3(ss)0-197.241r=0.278ΔGn,M0-1431.27 where 'ss' stands for the end-member solid component of surface precipitate, ΔGf,MvX(ss)0 is in kJ/mol, r is the Shannon-Prewitt radius of M in a given coordination state (nm), and ΔGn,M0 is the non-solvation contribution to the Gibbs free energy of formation of the aqueous M ion. Results indicate that the above surface precipitation correlations are useful tools where experimental data are not available.

  4. Climatology of extreme daily precipitation in Colorado and its diverse spatial and seasonal variability

    USGS Publications Warehouse

    Mahoney, Kelly M.; Ralph, F. Martin; Walter, Klaus; Doesken, Nolan; Dettinger, Michael; Gottas, Daniel; Coleman, Timothy; White, Allen

    2015-01-01

    The climatology of Colorado’s historical extreme precipitation events shows a remarkable degree of seasonal and regional variability. Analysis of the largest historical daily precipitation totals at COOP stations across Colorado by season indicates that the largest recorded daily precipitation totals have ranged from less than 60 mm day−1 in some areas to more than 250 mm day−1 in others. East of the Continental Divide, winter events are rarely among the top 10 events at a given site, but spring events dominate in and near the foothills; summer events are most common across the lower-elevation eastern plains, while fall events are most typical for the lower elevations west of the Divide. The seasonal signal in Colorado’s central mountains is complex; high-elevation intense precipitation events have occurred in all months of the year, including summer, when precipitation is more likely to be liquid (as opposed to snow), which poses more of an instantaneous flood risk. Notably, the historic Colorado Front Range daily rainfall totals that contributed to the damaging floods in September 2013 occurred outside of that region’s typical season for most extreme precipitation (spring–summer). That event and many others highlight the fact that extreme precipitation in Colorado has occurred historically during all seasons and at all elevations, emphasizing a year-round statewide risk.

  5. Potential of commercial microwave link network derived rainfall for river runoff simulations

    NASA Astrophysics Data System (ADS)

    Smiatek, Gerhard; Keis, Felix; Chwala, Christian; Fersch, Benjamin; Kunstmann, Harald

    2017-03-01

    Commercial microwave link networks allow for the quantification of path integrated precipitation because the attenuation by hydrometeors correlates with rainfall between transmitter and receiver stations. The networks, operated and maintained by cellphone companies, thereby provide completely new and country wide precipitation measurements. As the density of traditional precipitation station networks worldwide is significantly decreasing, microwave link derived precipitation estimates receive increasing attention not only by hydrologists but also by meteorological and hydrological services. We investigate the potential of microwave derived precipitation estimates for streamflow prediction and water balance analyses, exemplarily shown for an orographically complex region in the German Alps (River Ammer). We investigate the additional value of link derived rainfall estimations combined with station observations compared to station and weather radar derived values. Our river runoff simulation system employs a distributed hydrological model at 100 × 100 m grid resolution. We analyze the potential of microwave link derived precipitation estimates for two episodes of 30 days with typically moderate river flow and an episode of extreme flooding. The simulation results indicate the potential of this novel precipitation monitoring method: a significant improvement in hydrograph reproduction has been achieved in the extreme flooding period that was characterized by a large number of local strong precipitation events. The present rainfall monitoring gauges alone were not able to correctly capture these events.

  6. Knotting fingerprints resolve knot complexity and knotting pathways in ideal knots.

    PubMed

    Hyde, David A B; Henrich, Joshua; Rawdon, Eric J; Millett, Kenneth C

    2015-09-09

    We use disk matrices to define knotting fingerprints that provide fine-grained insights into the local knotting structure of ideal knots. These knots have been found to have spatial properties that highly correlate with those of interesting macromolecules. From this fine structure and an analysis of the associated planar graph, one can define a measure of knot complexity using the number of independent unknotting pathways from the global knot type as the knot is trimmed progressively to a short arc unknot. A specialization of the Cheeger constant provides a measure of constraint on these independent unknotting pathways. Furthermore, the structure of the knotting fingerprint supports a comparison of the tight knot pathways to the unconstrained unknotting pathways of comparable length.

  7. Supramolecular organization of cytochrome c oxidase- and alternative oxidase-dependent respiratory chains in the filamentous fungus Podospora anserina.

    PubMed

    Krause, Frank; Scheckhuber, Christian Q; Werner, Alexandra; Rexroth, Sascha; Reifschneider, Nicole H; Dencher, Norbert A; Osiewacz, Heinz D

    2004-06-18

    To elucidate the molecular basis of the link between respiration and longevity, we have studied the organization of the respiratory chain of a wild-type strain and of two long-lived mutants of the filamentous fungus Podospora anserina. This established aging model is able to respire by either the standard or the alternative pathway. In the latter pathway, electrons are directly transferred from ubiquinol to the alternative oxidase and thus bypass complexes III and IV. We show that the cytochrome c oxidase pathway is organized according to the mammalian "respirasome" model (Schägger, H., and Pfeiffer, K. (2000) EMBO J. 19, 1777-1783). In contrast, the alternative pathway is composed of distinct supercomplexes of complexes I and III (i.e. I(2) and I(2)III(2)), which have not been described so far. Enzymatic analysis reveals distinct functional properties of complexes I and III belonging to either cytochrome c oxidase- or alternative oxidase-dependent pathways. By a gentle colorless-native PAGE, almost all of the ATP synthases from mitochondria respiring by either pathway were preserved in the dimeric state. Our data are of significance for the understanding of both respiratory pathways as well as lifespan control and aging.

  8. Association of Seasonal Climate Variability and Age-Specific Mortality in Northern Sweden before the Onset of Industrialization

    PubMed Central

    Rocklöv, Joacim; Edvinsson, Sören; Arnqvist, Per; de Luna, Sara Sjöstedt; Schumann, Barbara

    2014-01-01

    Background and aims: Little is known about health impacts of climate in pre-industrial societies. We used historical data to investigate the association of temperature and precipitation with total and age-specific mortality in Skellefteå, northern Sweden, between 1749 and 1859. Methods: We retrieved digitized aggregated population data of the Skellefteå parish, and monthly temperature and precipitation measures. A generalized linear model was established for year to year variability in deaths by annual and seasonal average temperature and cumulative precipitation using a negative binomial function, accounting for long-term trends in population size. The final full model included temperature and precipitation of all four seasons simultaneously. Relative risks (RR) with 95% confidence intervals (CI) were calculated for total, sex- and age-specific mortality. Results: In the full model, only autumn precipitation proved statistically significant (RR 1.02; CI 1.00–1.03, per 1cm increase of autumn precipitation), while winter temperature (RR 0.98; CI 0.95–1.00, per 1 °C increase in temperature) and spring precipitation (RR 0.98; CI 0.97–1.00 per 1 cm increase in precipitation) approached significance. Similar effects were observed for men and women. The impact of climate variability on mortality was strongest in children aged 3–9, and partly also in older children. Infants, on the other hand, appeared to be less affected by unfavourable climate conditions. Conclusions: In this pre-industrial rural region in northern Sweden, higher levels of rain during the autumn increased the annual number of deaths. Harvest quality might be one critical factor in the causal pathway, affecting nutritional status and susceptibility to infectious diseases. Autumn rain probably also contributed to the spread of air-borne diseases in crowded living conditions. Children beyond infancy appeared most vulnerable to climate impacts. PMID:25003551

  9. PROCESS FOR THE RECOVERY OF PLUTONIUM

    DOEpatents

    Ritter, D.M.

    1959-01-13

    An improvement is presented in the process for recovery and decontamination of plutonium. The carrier precipitate containing plutonium is dissolved and treated with an oxidizing agent to place the plutonium in a hexavalent oxidation state. A lanthanum fluoride precipitate is then formed in and removed from the solution to carry undesired fission products. The fluoride ions in the reniaining solution are complexed by addition of a borate sueh as boric acid, sodium metaborate or the like. The plutonium is then reduced and carried from the solution by the formation of a bismuth phosphate precipitate. This process effects a better separation from unwanted flssion products along with conccntration of the plutonium by using a smaller amount of carrier.

  10. Simulated precipitation diurnal cycles over East Asia using different CAPE-based convective closure schemes in WRF model

    NASA Astrophysics Data System (ADS)

    Yang, Ben; Zhou, Yang; Zhang, Yaocun; Huang, Anning; Qian, Yun; Zhang, Lujun

    2018-03-01

    Closure assumption in convection parameterization is critical for reasonably modeling the precipitation diurnal variation in climate models. This study evaluates the precipitation diurnal cycles over East Asia during the summer of 2008 simulated with three convective available potential energy (CAPE) based closure assumptions, i.e. CAPE-relaxing (CR), quasi-equilibrium (QE), and free-troposphere QE (FTQE) and investigates the impacts of planetary boundary layer (PBL) mixing, advection, and radiation on the simulation by using the weather research and forecasting model. The sensitivity of precipitation diurnal cycle to PBL vertical resolution is also examined. Results show that the precipitation diurnal cycles simulated with different closures all exhibit large biases over land and the simulation with FTQE closure agrees best with observation. In the simulation with QE closure, the intensified PBL mixing after sunrise is responsible for the late-morning peak of convective precipitation, while in the simulation with FTQE closure, convective precipitation is mainly controlled by advection cooling. The relative contributions of different processes to precipitation formation are functions of rainfall intensity. In the simulation with CR closure, the dynamical equilibrium in the free troposphere still can be reached, implying the complex cause-effect relationship between atmospheric motion and convection. For simulations in which total CAPE is consumed for the closures, daytime precipitation decreases with increased PBL resolution because thinner model layer produces lower convection starting layer, leading to stronger downdraft cooling and CAPE consumption. The sensitivity of the diurnal peak time of precipitation to closure assumption can also be modulated by changes in PBL vertical resolution. The results of this study help us better understand the impacts of various processes on the precipitation diurnal cycle simulation.

  11. Thermally promoted evolution of open-volume defects and Cu precipitates in the deformed FeCu alloys

    NASA Astrophysics Data System (ADS)

    Jin, Shuoxue; Cao, Xingzhong; Cheng, Guodong; Lian, Xiangyu; Zhu, Te; Zhang, Peng; Yu, Runsheng; Wang, Baoyi

    2018-04-01

    We have studied the effect of isothermal annealing on the evolution of the open-volume defect and the Cu precipitate in deformed Fe0.15Cu, Fe0.3Cu and Fe0.6Cu alloys. Using the coincidence Doppler broadening, positron annihilation lifetime and the S-W couples, the evolution of local electronic circumstance around the annihilation sites, open-volume defects and interaction between open-volume defects and Cu precipitates were measured as a function of the isothermal annealing temperatures. Cold rolling deformation induced an obvious increment in S parameters due to the formation of open-volume defects. Annealing not only resulted in gradual recovery of open-volume defects and Cu thermal precipitation, but also promoted the combination and interaction between defects and Cu precipitates. The interaction between open-volume defects and Cu precipitates was revealed clearly by the view point of S-W relationship. The S-W interaction for the different CumVn complexes was also calculated theoretically by MIKA-Doppler, which supports our experimental observations qualitatively. The results indicate that open-volume defects were formed first after cold rolling, followed by the Cu precipitation and recovery of open-volume defects, Cu precipitates recovered at the end. It is interesting that the trajectory of (S, W) points with increasing annealing temperature formed a similar closed "Parallelogram" shape. It is benefit for revealing the behavior of Cu thermal precipitation and their evolution in various Cu-bearing steels under thermal treatment. In addition, we also investigated the Cu content effect on the Cu precipitation in FeCu alloys, and the Cu precipitate phenomenon was enhanced in higher Cu content alloys.

  12. Path lumping: An efficient algorithm to identify metastable path channels for conformational dynamics of multi-body systems

    NASA Astrophysics Data System (ADS)

    Meng, Luming; Sheong, Fu Kit; Zeng, Xiangze; Zhu, Lizhe; Huang, Xuhui

    2017-07-01

    Constructing Markov state models from large-scale molecular dynamics simulation trajectories is a promising approach to dissect the kinetic mechanisms of complex chemical and biological processes. Combined with transition path theory, Markov state models can be applied to identify all pathways connecting any conformational states of interest. However, the identified pathways can be too complex to comprehend, especially for multi-body processes where numerous parallel pathways with comparable flux probability often coexist. Here, we have developed a path lumping method to group these parallel pathways into metastable path channels for analysis. We define the similarity between two pathways as the intercrossing flux between them and then apply the spectral clustering algorithm to lump these pathways into groups. We demonstrate the power of our method by applying it to two systems: a 2D-potential consisting of four metastable energy channels and the hydrophobic collapse process of two hydrophobic molecules. In both cases, our algorithm successfully reveals the metastable path channels. We expect this path lumping algorithm to be a promising tool for revealing unprecedented insights into the kinetic mechanisms of complex multi-body processes.

  13. Rates of nickel(II) capture from complexes with NTA, EDDA, and related tetradentate chelating agents by the hexadentate chelating agents EDTA and CDTA: Evidence of a "semijunctive" ligand exchange pathway

    NASA Astrophysics Data System (ADS)

    Boland, Nathan E.; Stone, Alan T.

    2017-09-01

    Many siderophores and metallophores produced by soil organisms, as well as anthropogenic chelating agent soil amendments, rely upon amine and carboxylate Lewis base groups for metal ion binding. UV-visible spectra of metal ion-chelating agent complexes are often similar and, as a consequence, whole-sample absorbance measurements are an unreliable means of monitoring the progress of exchange reactions. In the present work, we employ capillary electrophoresis to physically separate Ni(II)-tetradentate chelating agent complexes (NiL) from Ni(II)-hexadentate chelating agent complexes (NiY) prior to UV detection, such that progress of the reaction NiL + Y → NiY + L can be conveniently monitored. Rates of ligand exchange for Ni(II) are lower than for other +II transition metal ions. Ni(II) speciation in environmental media is often under kinetic rather than equilibrium control. Nitrilotriacetic acid (NTA), with three carboxylate groups all tethered to a central amine Lewis base group, ethylenediamine-N,N‧-diacetic acid (EDDA), with carboxylate-amine-amine-carboxylate groups arranged linearly, plus four structurally related compounds, are used as tetradentate chelating agents. Ethylenediaminetetraacetic acid (EDTA) and the structurally more rigid analog trans-cyclohexaneethylenediaminetetraacetic acid (CDTA) are used as hexadentate chelating agents. Effects of pH and reactant concentration are explored. Ni(II) capture by EDTA was consistently more than an order of magnitude faster than capture by CDTA, and too fast to quantify using our capillary electrophoresis-based technique. Using NiNTA as a reactant, Ni(II) capture by CDTA is independent of CDTA concentration and greatly enhanced by a proton-catalyzed pathway at low pH. Using NiEDDA as reactant, Ni(II) capture by CDTA is first order with respect to CDTA concentration, and the contribution from the proton-catalyzed pathway diminished by CDTA protonation. While the convention is to assign either a disjunctive pathway or adjunctive pathway to multidentate ligand exchange reactions, our results indicate that a third "semijunctive" pathway is necessary to account for slow reactions progressing through Lsbnd Nisbnd Y ternary complexes. Ligand exchange pathways with NTA-type chelating agents are assigned a disjunctive pathway, while pathways with EDDA-type chelating agents are assigned a semijunctive pathway. Based upon operative mechanism(s), magnitudes of exchange rates and effects of ambient geochemical conditions can be predicted.

  14. Mechanisms of boron removal from hydraulic fracturing wastewater by aluminum electrocoagulation.

    PubMed

    Sari, Mutiara Ayu; Chellam, Shankararaman

    2015-11-15

    Boron uptake from highly saline hydraulic fracturing wastewater by freshly precipitated amorphous Al(OH)3 precipitates is due to ligand exchange and complexation with surface hydroxyl groups. Consequently, aluminum electrocoagulation can be a feasible approach to remove boron from flowback/produced water. Actual hydraulic fracturing wastewater containing ∼120mg/L boron from the Eagle Ford shale play was employed. Electrocoagulation was performed over a range of aluminum dosages (0-1350mg/L), pH 6.4 and 8, and high current densities (20-80mA/cm(2)) using a cylindrical aluminum anode encompassed by a porous cylindrical 316-stainless steel cathode. Direct measurements of boron uptake along with its chemical state and coordination were made using Attenuated Total Reflection-Fourier Transform Infrared spectroscopy (ATR-FTIR) and X-Ray Photoelectron Spectroscopy. Boron removal increased monotonically with aluminum dosage and was higher at pH 8, but remained relatively constant at ⩾20mA/cm(2). Chloride ions induced anodic pitting and super-Faradaic (131% efficiency) aluminum dissolution and their electrooxidation produced free chlorine. ATR-FTIR suggested outer-sphere and inner-sphere complexation of trigonal B(OH)3 with Al(OH)3, which was confirmed by the BO bond shifting toward lower binding energies in XPS. Severe AlO interferences precluded evidence for tetrahedral B(OH)4(-) complexation. No evidence for co-precipitation was obtained. Copyright © 2015 Elsevier Inc. All rights reserved.

  15. A systematic genetic screen for genes involved in sensing inorganic phosphate availability in Saccharomyces cerevisiae

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Choi, Joonhyuk; Rajagopal, Abbhirami; Xu, Yi -Fan

    Saccharomyces cerevisiae responds to changes in extracellular inorganic phosphate (Pi) availability by regulating the activity of the phosphate-responsive (PHO) signaling pathway, enabling cells to maintain intracellular levels of the essential nutrient P i. P i-limitation induces upregulation of inositol heptakisphosphate (IP 7) synthesized by the inositol hexakisphosphate kinase Vip1, triggering inhibition of the Pho80/Pho85 cyclin-cyclin dependent kinase (CDK) complex by the CDK inhibitor Pho81, which upregulates the PHO regulon through the CDK target and transcription factor Pho4. To identify genes that are involved in signaling upstream of the Pho80/Pho85/Pho81 complex and how they interact with each other to regulate themore » PHO pathway, we performed genome-wide screens with the synthetic genetic array method. We identified more than 300 mutants with defects in signaling upstream of the Pho80/Pho85/Pho81 complex, including AAH1, which encodes an adenine deaminase that negatively regulates the PHO pathway in a Vip1-dependent manner. Moreover, we showed that even in the absence of VIP1, the PHO pathway can be activated under prolonged periods of P i starvation, suggesting complexity in the mechanisms by which the PHO pathway is regulated.« less

  16. A systematic genetic screen for genes involved in sensing inorganic phosphate availability in Saccharomyces cerevisiae

    DOE PAGES

    Choi, Joonhyuk; Rajagopal, Abbhirami; Xu, Yi -Fan; ...

    2017-05-17

    Saccharomyces cerevisiae responds to changes in extracellular inorganic phosphate (Pi) availability by regulating the activity of the phosphate-responsive (PHO) signaling pathway, enabling cells to maintain intracellular levels of the essential nutrient P i. P i-limitation induces upregulation of inositol heptakisphosphate (IP 7) synthesized by the inositol hexakisphosphate kinase Vip1, triggering inhibition of the Pho80/Pho85 cyclin-cyclin dependent kinase (CDK) complex by the CDK inhibitor Pho81, which upregulates the PHO regulon through the CDK target and transcription factor Pho4. To identify genes that are involved in signaling upstream of the Pho80/Pho85/Pho81 complex and how they interact with each other to regulate themore » PHO pathway, we performed genome-wide screens with the synthetic genetic array method. We identified more than 300 mutants with defects in signaling upstream of the Pho80/Pho85/Pho81 complex, including AAH1, which encodes an adenine deaminase that negatively regulates the PHO pathway in a Vip1-dependent manner. Moreover, we showed that even in the absence of VIP1, the PHO pathway can be activated under prolonged periods of P i starvation, suggesting complexity in the mechanisms by which the PHO pathway is regulated.« less

  17. Aluminum in Precipitation, Streams, and Shallow Groundwater in the New Jersey Pine Barrens

    NASA Astrophysics Data System (ADS)

    Budd, W. W.; Johnson, A. H.; Huss, J. B.; Turner, R. S.

    1981-08-01

    Total (acid reactive) aluminum deposited in bulk precipitation in the McDonalds Branch (New Jersey) basin was 140 mg m-2 yr-1 for the period May 1978-May 1980. Stream and groundwater outputs for the same period were 149 and 110 mg m-2 yr-1, respectively. Aluminum inputs and outputs were highest during summer months because of elevated concentrations coupled with increased precipitation and streamflow. Median acid reactive Al concentrations in precipitation, stream water, and groundwater were 100, 350, and 230 μg 1-1, respectively. In streams, acid reactive Al concentration is correlated with dissolved organic matter concentration, suggesting that Al is transported as an organometallic complex. Shallow groundwater Al concentration is apparently controlled by gibbsite solubility in mineral soils and thus is pH dependent. The relatively high Al concentrations are attributable to acid conditions and mobile organic matter.

  18. Foveational Complexity in Single Word Identification: Contralateral Visual Pathways Are Advantaged over Ipsilateral Pathways

    ERIC Educational Resources Information Center

    Obregon, Mateo; Shillcock, Richard

    2012-01-01

    Recognition of a single word is an elemental task in innumerable cognitive psychology experiments, but involves unexpected complexity. We test a controversial claim that the human fovea is vertically divided, with each half projecting to either the contralateral or ipsilateral hemisphere, thereby influencing foveal word recognition. We report a…

  19. AJUBA LIM Proteins Limit Hippo Activity in Proliferating Cells by Sequestering the Hippo Core Kinase Complex in the Cytosol.

    PubMed

    Jagannathan, Radhika; Schimizzi, Gregory V; Zhang, Kun; Loza, Andrew J; Yabuta, Norikazu; Nojima, Hitoshi; Longmore, Gregory D

    2016-10-15

    The Hippo pathway controls organ growth and is implicated in cancer development. Whether and how Hippo pathway activity is limited to sustain or initiate cell growth when needed is not understood. The members of the AJUBA family of LIM proteins are negative regulators of the Hippo pathway. In mammalian epithelial cells, we found that AJUBA LIM proteins limit Hippo regulation of YAP, in proliferating cells only, by sequestering a cytosolic Hippo kinase complex in which LATS kinase is inhibited. At the plasma membranes of growth-arrested cells, AJUBA LIM proteins do not inhibit or associate with the Hippo kinase complex. The ability of AJUBA LIM proteins to inhibit YAP regulation by Hippo and to associate with the kinase complex directly correlate with their capacity to limit Hippo signaling during Drosophila wing development. AJUBA LIM proteins did not influence YAP activity in response to cell-extrinsic or cell-intrinsic mechanical signals. Thus, AJUBA LIM proteins limit Hippo pathway activity in contexts where cell proliferation is needed. Copyright © 2016 Jagannathan et al.

  20. AJUBA LIM Proteins Limit Hippo Activity in Proliferating Cells by Sequestering the Hippo Core Kinase Complex in the Cytosol

    PubMed Central

    Jagannathan, Radhika; Schimizzi, Gregory V.; Zhang, Kun; Loza, Andrew J.; Yabuta, Norikazu; Nojima, Hitoshi

    2016-01-01

    The Hippo pathway controls organ growth and is implicated in cancer development. Whether and how Hippo pathway activity is limited to sustain or initiate cell growth when needed is not understood. The members of the AJUBA family of LIM proteins are negative regulators of the Hippo pathway. In mammalian epithelial cells, we found that AJUBA LIM proteins limit Hippo regulation of YAP, in proliferating cells only, by sequestering a cytosolic Hippo kinase complex in which LATS kinase is inhibited. At the plasma membranes of growth-arrested cells, AJUBA LIM proteins do not inhibit or associate with the Hippo kinase complex. The ability of AJUBA LIM proteins to inhibit YAP regulation by Hippo and to associate with the kinase complex directly correlate with their capacity to limit Hippo signaling during Drosophila wing development. AJUBA LIM proteins did not influence YAP activity in response to cell-extrinsic or cell-intrinsic mechanical signals. Thus, AJUBA LIM proteins limit Hippo pathway activity in contexts where cell proliferation is needed. PMID:27457617

  1. BLM and the FANC proteins collaborate in a common pathway in response to stalled replication forks

    PubMed Central

    Pichierri, Pietro; Franchitto, Annapaola; Rosselli, Filippo

    2004-01-01

    Fanconi anaemia (FA) and Bloom syndrome (BS) are autosomal recessive diseases characterised by chromosome fragility and cancer proneness. Here, we report that BLM and the FA pathway are activated in response to both crosslinked DNA and replication fork stall. We provide evidence that BLM and FANCD2 colocalise and co-immunoprecipitate following treatment with either DNA crosslinkers or agents inducing replication arrest. We also find that the FA core complex is necessary for BLM phosphorylation and assembly in nuclear foci in response to crosslinked DNA. Moreover, we show that knock-down of the MRE11 complex, whose function is also under the control of the FA core complex, enhances cellular and chromosomal sensitivity to DNA interstrand crosslinks in BS cells. These findings suggest the existence of a functional link between BLM and the FA pathway and that BLM and the MRE11 complex are in two separated branches of a pathway resulting in S-phase checkpoint activation, chromosome integrity and cell survival in response to crosslinked DNA. PMID:15257300

  2. Illuminating the Reaction Pathways of Viromimetic Assembly.

    PubMed

    Cingil, Hande E; Boz, Emre B; Biondaro, Giovanni; de Vries, Renko; Cohen Stuart, Martien A; Kraft, Daniela J; van der Schoot, Paul; Sprakel, Joris

    2017-04-05

    The coassembly of well-defined biological nanostructures relies on a delicate balance between attractive and repulsive interactions between biomolecular building blocks. Viral capsids are a prototypical example, where coat proteins exhibit not only self-interactions but also interact with the cargo they encapsulate. In nature, the balance between antagonistic and synergistic interactions has evolved to avoid kinetic trapping and polymorphism. To date, it has remained a major challenge to experimentally disentangle the complex kinetic reaction pathways that underlie successful coassembly of biomolecular building blocks in a noninvasive approach with high temporal resolution. Here we show how macromolecular force sensors, acting as a genome proxy, allow us to probe the pathways through which a viromimetic protein forms capsids. We uncover the complex multistage process of capsid assembly, which involves recruitment and complexation, followed by allosteric growth of the proteinaceous coat. Under certain conditions, the single-genome particles condense into capsids containing multiple copies of the template. Finally, we derive a theoretical model that quantitatively describes the kinetics of recruitment and growth. These results shed new light on the origins of the pathway complexity in biomolecular coassembly.

  3. Evaluation of global fine-resolution precipitation products and their uncertainty quantification in ensemble discharge simulations

    NASA Astrophysics Data System (ADS)

    Qi, W.; Zhang, C.; Fu, G.; Sweetapple, C.; Zhou, H.

    2016-02-01

    The applicability of six fine-resolution precipitation products, including precipitation radar, infrared, microwave and gauge-based products, using different precipitation computation recipes, is evaluated using statistical and hydrological methods in northeastern China. In addition, a framework quantifying uncertainty contributions of precipitation products, hydrological models, and their interactions to uncertainties in ensemble discharges is proposed. The investigated precipitation products are Tropical Rainfall Measuring Mission (TRMM) products (TRMM3B42 and TRMM3B42RT), Global Land Data Assimilation System (GLDAS)/Noah, Asian Precipitation - Highly-Resolved Observational Data Integration Towards Evaluation of Water Resources (APHRODITE), Precipitation Estimation from Remotely Sensed Information using Artificial Neural Networks (PERSIANN), and a Global Satellite Mapping of Precipitation (GSMAP-MVK+) product. Two hydrological models of different complexities, i.e. a water and energy budget-based distributed hydrological model and a physically based semi-distributed hydrological model, are employed to investigate the influence of hydrological models on simulated discharges. Results show APHRODITE has high accuracy at a monthly scale compared with other products, and GSMAP-MVK+ shows huge advantage and is better than TRMM3B42 in relative bias (RB), Nash-Sutcliffe coefficient of efficiency (NSE), root mean square error (RMSE), correlation coefficient (CC), false alarm ratio, and critical success index. These findings could be very useful for validation, refinement, and future development of satellite-based products (e.g. NASA Global Precipitation Measurement). Although large uncertainty exists in heavy precipitation, hydrological models contribute most of the uncertainty in extreme discharges. Interactions between precipitation products and hydrological models can have the similar magnitude of contribution to discharge uncertainty as the hydrological models. A better precipitation product does not guarantee a better discharge simulation because of interactions. It is also found that a good discharge simulation depends on a good coalition of a hydrological model and a precipitation product, suggesting that, although the satellite-based precipitation products are not as accurate as the gauge-based products, they could have better performance in discharge simulations when appropriately combined with hydrological models. This information is revealed for the first time and very beneficial for precipitation product applications.

  4. Self-Irradiation Effects on 99Mo Reagents and Products

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carson, S.D.; Garcia, M.J.; McDonald, M.J.

    1998-10-07

    produced in 1996 and shipped to pharmaceutical houses for evaluation of compatibility with oxime solution used to precipitate `?vfo as the oxime complex is both air and light-sensitive, and containing a black precipitate that forms during shipment, presumably as a result of self- irradiation. Addition of sodium hypochlorite to the product solution prior to shipment prevents precipitate formation, indicating the precipitate is a reduced form of `%lo. to remove any precipitate. Duplicate aliquots of the filtered samples were titrated to a phenolphthalein irradiation and afler standing at room temperature for 86.4 hours. Precipitates were washed to a FTIR analysis ofmore » the white precipitate showed it to be alpha benzoin oxime. Since the basic After 86.4 hours, no precipitate had formed in bottles containing sodium hypochlorite. Black precipitate had formed in all bottles that did not contain sodium hypochlorite after 14.4 hours. The precipitate appeared to initially form on the surface of the HDPE sample bottles and Black precipitate was first noticed in sample set 1 after 28.8 hrs' irradiation. No visible sample containing precipitate was kept at room temperature in the original bottle. Precipitate in sample sets 2 and 3. Since no precipitate formed in these bottles, this was equivalent to duplicate samples. Once the precipitate in the 20-mL aliquots that had been set aside had returned to sample sets 1 through 3 and the samples with redissolved precipitate all experienced an average decrease in base strength of 0.013 meq mL-l. Sample 1-C had a decrease of 0.004 meq mL-l and sample 1-D had returned to the initial value of 0.198 meq mL-l. Raman spectra for the black precipitate from samples l-C, 1-D and supplemental sample set 1 Fig. 2. Raman spectra of the black precipitate formed in 9%40 product solutions after 28.8,43.2, 72 and 86.4 hours of `oCo irradiation in Sandia's Gamma Irradiation Facility. increase with time, as seen in the titration of 1-C and 1-D samples. The precipitate does not expect to see precipitate in the glass bottles. The fact that no precipitate is observed when the no precipitate is observed in a glass container is an indication that the rates of molybdenum that precipitate does not form when the solution is in a glass bottle. A hydrogen source other« less

  5. The Canadian Precipitation Analysis (CaPA): Evaluation of the statistical interpolation scheme

    NASA Astrophysics Data System (ADS)

    Evans, Andrea; Rasmussen, Peter; Fortin, Vincent

    2013-04-01

    CaPA (Canadian Precipitation Analysis) is a data assimilation system which employs statistical interpolation to combine observed precipitation with gridded precipitation fields produced by Environment Canada's Global Environmental Multiscale (GEM) climate model into a final gridded precipitation analysis. Precipitation is important in many fields and applications, including agricultural water management projects, flood control programs, and hydroelectric power generation planning. Precipitation is a key input to hydrological models, and there is a desire to have access to the best available information about precipitation in time and space. The principal goal of CaPA is to produce this type of information. In order to perform the necessary statistical interpolation, CaPA requires the estimation of a semi-variogram. This semi-variogram is used to describe the spatial correlations between precipitation innovations, defined as the observed precipitation amounts minus the GEM forecasted amounts predicted at the observation locations. Currently, CaPA uses a single isotropic variogram across the entire analysis domain. The present project investigates the implications of this choice by first conducting a basic variographic analysis of precipitation innovation data across the Canadian prairies, with specific interest in identifying and quantifying potential anisotropy within the domain. This focus is further expanded by identifying the effect of storm type on the variogram. The ultimate goal of the variographic analysis is to develop improved semi-variograms for CaPA that better capture the spatial complexities of precipitation over the Canadian prairies. CaPA presently applies a Box-Cox data transformation to both the observations and the GEM data, prior to the calculation of the innovations. The data transformation is necessary to satisfy the normal distribution assumption, but introduces a significant bias. The second part of the investigation aims at devising a bias correction scheme based on a moving-window averaging technique. For both the variogram and bias correction components of this investigation, a series of trial runs are conducted to evaluate the impact of these changes on the resulting CaPA precipitation analyses.

  6. Towards a better Understanding and reducing of the Groundwater Contamination in Saint Katherine area, Sinai, Egypt; Using Remote Sensing and Chemical Analyses

    NASA Astrophysics Data System (ADS)

    Fekri, A.; Mohamed, L.

    2017-12-01

    Egypt has a big water shortage problem because of the high population density and the lack of the surface water resources. So it was necessary to identify additional clean water resources and among all of the other alternative water resources, groundwater should be the most appropriate choice for Egyptians to explore and develop. Saint Katherine area is located in the highest mountainous area of southern Sinai including parallel ridges separated by deep wadis which have been cut along faults and fractures and enlarged through intense precipitation events during the old pluvial periods. Katherina volcanics and the surrounding granitic rocks in Saint Katherine area, which are generally impermeable except through fractures such as faults, joints and shear zones, are recharged with 50 mm annual precipitation. The groundwater recharge find a way through sets of interconnected joints to feed the existing wells in the low-lying fault zones. After the St. Katherine Protectorate was activated in 1996, public awareness of the possible harmful impact of the existing inadequate sewage disposal increased. The groundwater contamination (nitrates and coliform bacteria) in St. Katherine area causes health problems such as diarrhea and skin infections due to the use of well water for household purposes. This study will focus on; monitoring, evaluating and cleaning up the contaminant distribution in St. Katherine groundwater, using a conceptual model for the fault control on the groundwater flow in fractured basement aquifers to understand the possible pathways for the contaminated groundwater (using remote sensing data), and by preparing disinfectant tracers. It is known that Coliform bacteria could be treated by using Sulfanilamide drug, but in this study we will modify the Sulfanilamide compounds which are considered as ligands containing N, O, S donor atoms that could be used to uptake the transition metals, and produce a colored complex. The produced complex will work as a tracer to follow and understand the water path and disinfect water from Coliform bacteria. Moreover, such ligands could be loaded over Natural Polymeric Material or algae to remove nitrates by reducing it into its elemental state of N2.

  7. Flow Through Cement Fracture Under Geological Carbon Sequestration Conditions: Critical Residence Time as a Unifying Parameter for Fracture Opening or Self-Sealing Behavior

    NASA Astrophysics Data System (ADS)

    Li, L.; Brunet, J. P. L.; Karpyn, Z.; Huerta, N. J.

    2016-12-01

    During geological carbon sequestration (GCS) large quantities of CO2 are injected in underground formations. Cement fractures represent preferential leakage pathways in abandoned wells upon exposure to CO2-rich fluid. Contrasting self- healing and fracture opening behavior have been observed while a unifying framework is still missing. The modelling of this process is challenging as it involves complex chemical, mechanical and transport interactions. We developed a process-based reactive transport model that explicitly simulates flow and multi-component reactive transport in fractured cement by reproducing experimental observations of sharp flow rate reduction during exposure to carbonated water. Mechanical interactions have not been included. The simulation shows a similar reaction network as in diffusion-controlled systems without flow. That is, CO2-rich water induced portlandite dissolution, releasing calcium that further reacted with carbonate to form calcite. This created localized changes in porosity and permeability inducing large differences in the long term response of the system through a complex positive feedback loop (e.g., a decrease in local permeability induces a decrease in flow that in turn amplifies the precipitation of calcite through a reduced acidic brine flow). The calibrated model was used to generate 250 numerical experiments of CO2-flooding in cement fractures with varying initial hydraulic apertures (b) and residence times (τ) defined as the ratio of fracture volume over flow rate. A long τ leads to slow replenishment of carbonated water, calcite precipitation, and self-sealing. The opposite occurs when τ is small with short fractures and fast flow rates. Simulation results indicate that a critical residence time τc - the minimum τ required for self-sealing -divides the conditions that trigger the diverging opening and self-sealing behavior. The τc value depends on the initial aperture size (see figure). Among the 250 simulated fracture cases, significant changes in effective permeability - self-healing or opening - typically occurs within hours to a day, thus providing a supporting argument for the extrapolation of short-term laboratory observations (hours to months) to long-term predictions at relevant GCS time scales (years to hundreds of years).

  8. Multi-functional regulation of 4E-BP gene expression by the Ccr4-Not complex.

    PubMed

    Okada, Hirokazu; Schittenhelm, Ralf B; Straessle, Anna; Hafen, Ernst

    2015-01-01

    The mechanistic target of rapamycin (mTOR) signaling pathway is highly conserved from yeast to humans. It senses various environmental cues to regulate cellular growth and homeostasis. Deregulation of the pathway has been implicated in many pathological conditions including cancer. Phosphorylation cascades through the pathway have been extensively studied but not much is known about the regulation of gene expression of the pathway components. Here, we report that the mRNA level of eukaryotic translation initiation factor (eIF) subunit 4E-binding protein (4E-BP) gene, one of the key mTOR signaling components, is regulated by the highly conserved Ccr4-Not complex. RNAi knockdown of Not1, a putative scaffold protein of this protein complex, increases the mRNA level of 4E-BP in Drosophila Kc cells. Examination of the gene expression mechanism using reporter swap constructs reveals that Not1 depletion increases reporter mRNAs with the 3'UTR of 4E-BP gene, but decreases the ones with the 4E-BP promoter region, suggesting that Ccr4-Not complex regulates both degradation and transcription of 4E-BP mRNA. These results indicate that the Ccr4-Not complex controls expression of a single gene at multiple levels and adjusts the magnitude of the total effect. Thus, our study reveals a novel regulatory mechanism of a key component of the mTOR signaling pathway at the level of gene expression.

  9. Environmental variability and acoustic signals: a multi-level approach in songbirds.

    PubMed

    Medina, Iliana; Francis, Clinton D

    2012-12-23

    Among songbirds, growing evidence suggests that acoustic adaptation of song traits occurs in response to habitat features. Despite extensive study, most research supporting acoustic adaptation has only considered acoustic traits averaged for species or populations, overlooking intraindividual variation of song traits, which may facilitate effective communication in heterogeneous and variable environments. Fewer studies have explicitly incorporated sexual selection, which, if strong, may favour variation across environments. Here, we evaluate the prevalence of acoustic adaptation among 44 species of songbirds by determining how environmental variability and sexual selection intensity are associated with song variability (intraindividual and intraspecific) and short-term song complexity. We show that variability in precipitation can explain short-term song complexity among taxonomically diverse songbirds, and that precipitation seasonality and the intensity of sexual selection are related to intraindividual song variation. Our results link song complexity to environmental variability, something previously found for mockingbirds (Family Mimidae). Perhaps more importantly, our results illustrate that individual variation in song traits may be shaped by both environmental variability and strength of sexual selection.

  10. Gene Transfer in Eukaryotic Cells Using Activated Dendrimers

    NASA Astrophysics Data System (ADS)

    Dennig, Jörg

    Gene transfer into eukaryotic cells plays an important role in cell biology. Over the last 30 years a number of transfection methods have been developed to mediate gene transfer into eukaryotic cells. Classical methods include co-precipitation of DNA with calcium phosphate, charge-dependent precipitation of DNA with DEAE-dextran, electroporation of nucleic acids, and formation of transfection complexes between DNA and cationic liposomes. Gene transfer technologies based on activated PAMAM-dendrimers provide another class of transfection reagents. PAMAM-dendrimers are highly branched, spherical molecules. Activation of newly synthesized dendrimers involves hydrolytic removal of some of the branches, and results in a molecule with a higher degree of flexibility. Activated dendrimers assemble DNA into compact structures via charge interactions. Activated dendrimer - DNA complexes bind to the cell membrane of eukaryotic cells, and are transported into the cell by non-specific endocytosis. A structural model of the activated dendrimer - DNA complex and a potential mechanism for its uptake into cells will be discussed.

  11. A study on the inhibitory mechanism for cholesterol absorption by α-cyclodextrin administration

    PubMed Central

    Furune, Takahiro; Ikuta, Naoko; Ishida, Yoshiyuki; Okamoto, Hinako; Nakata, Daisuke; Terao, Keiji

    2014-01-01

    Summary Background: Micelle formation of cholesterol with lecithin and bile salts is a key process for intestinal absorption of lipids. Some dietary fibers commonly used to reduce the lipid content in the body are thought to inhibit lipid absorption by binding to bile salts and decreasing the lipid solubility. Amongst these, α-cyclodextrin (α-CD) is reportedly one of the most powerful dietary fibers for decreasing blood cholesterol. However, it is difficult to believe that α-CD directly removes cholesterol because it has a very low affinity for cholesterol and its mechanism of action is less well understood than those of other dietary fibers. To identify this mechanism, we investigated the interaction of α-CD with lecithin and bile salts, which are essential components for the dissolution of cholesterol in the small intestine, and the effect of α-CD on micellar solubility of cholesterol. Results: α-CD was added to Fed-State Simulated Intestinal Fluid (FeSSIF), and precipitation of a white solid was observed. Analytical data showed that the precipitate was a lecithin and α-CD complex with a molar ratio of 1:4 or 1:5. The micellar solubility of cholesterol in the mixture of FeSSIF and α-CD was investigated, and found to decrease through lecithin precipitation caused by the addition of α-CD, in a dose-dependent manner. Furthermore, each of several other water-soluble dietary fibers was added to the FeSSIF, and no precipitate was generated. Conclusion: This study suggests that α-CD decreases the micellar solubility of cholesterol in the lumen of the small intestine via the precipitation of lecithin from bile salt micelles by complex formation with α-CD. It further indicates that the lecithin precipitation effect on the bile salt micelles by α-CD addition clearly differs from addition of other water-soluble dietary fibers. The decrease in micellar cholesterol solubility in the FeSSIF was the strongest with α-CD addition. PMID:25550749

  12. Therapeutic affect reduction, emotion regulation, and emotional memory reconsolidation: A neuroscientific quandary.

    PubMed

    LaBar, Kevin S

    2015-01-01

    Lane et al. emphasize the role of emotional arousal as a precipitating factor for successful psychotherapy. However, as therapy ensues, the arousal diminishes. How can the unfolding therapeutic process generate long-term memories for reconsolidated emotional material without the benefit of arousal? Studies investigating memory for emotionally regulated material provide some clues regarding the neural pathways that may underlie therapy-based memory reconsolidation.

  13. Long-distance dispersal of spruce budworm (Choristoneura fumiferana Clemens) in Minnesota (USA) and Ontario (Canada) via the atmospheric pathway

    Treesearch

    Brian R. Sturtevant; Gary L. Achtemeier; Joseph J. Charney; Dean P. Anderson; Barry J. Cooke; Phillip A. Townsend

    2013-01-01

    Dispersal can play an important role in the population dynamics of forest insects, but the role of long-distance immigration and emigration remains unclear due to the difficulty of quantifying dispersal distance and direction. We designed an agent-based spruce budworm flight behavior model that, when interfaced with temperature, wind speed, and precipitation output...

  14. Disdrometer-based C-Band Radar Quantitative Precipitation Estimation (QPE) in a highly complex terrain region in tropical Colombia.

    NASA Astrophysics Data System (ADS)

    Sepúlveda, J.; Hoyos Ortiz, C. D.

    2017-12-01

    An adequate quantification of precipitation over land is critical for many societal applications including agriculture, hydroelectricity generation, water supply, and risk management associated with extreme events. The use of rain gauges, a traditional method for precipitation estimation, and an excellent one, to estimate the volume of liquid water during a particular precipitation event, does not allow to fully capture the highly spatial variability of the phenomena which is a requirement for almost all practical applications. On the other hand, the weather radar, an active remote sensing sensor, provides a proxy for rainfall with fine spatial resolution and adequate temporary sampling, however, it does not measure surface precipitation. In order to fully exploit the capabilities of the weather radar, it is necessary to develop quantitative precipitation estimation (QPE) techniques combining radar information with in-situ measurements. Different QPE methodologies are explored and adapted to local observations in a highly complex terrain region in tropical Colombia using a C-Band radar and a relatively dense network of rain gauges and disdrometers. One important result is that the expressions reported in the literature for extratropical locations are not representative of the conditions found in the tropical region studied. In addition to reproducing the state-of-the-art techniques, a new multi-stage methodology based on radar-derived variables and disdrometer data is proposed in order to achieve the best QPE possible. The main motivation for this new methodology is based on the fact that most traditional QPE methods do not directly take into account the different uncertainty sources involved in the process. The main advantage of the multi-stage model compared to traditional models is that it allows assessing and quantifying the uncertainty in the surface rain rate estimation. The sub-hourly rainfall estimations using the multi-stage methodology are realistic compared to observed data in spite of the many sources of uncertainty including the sampling volume, the different physical principles of the sensors, the incomplete understanding of the microphysics of precipitation and, the most important, the rapidly varying droplet size distribution.

  15. Geophysical monitoring and reactive transport modeling of ureolytically-driven calcium carbonate precipitation

    PubMed Central

    2011-01-01

    Ureolytically-driven calcium carbonate precipitation is the basis for a promising in-situ remediation method for sequestration of divalent radionuclide and trace metal ions. It has also been proposed for use in geotechnical engineering for soil strengthening applications. Monitoring the occurrence, spatial distribution, and temporal evolution of calcium carbonate precipitation in the subsurface is critical for evaluating the performance of this technology and for developing the predictive models needed for engineering application. In this study, we conducted laboratory column experiments using natural sediment and groundwater to evaluate the utility of geophysical (complex resistivity and seismic) sensing methods, dynamic synchrotron x-ray computed tomography (micro-CT), and reactive transport modeling for tracking ureolytically-driven calcium carbonate precipitation processes under site relevant conditions. Reactive transport modeling with TOUGHREACT successfully simulated the changes of the major chemical components during urea hydrolysis. Even at the relatively low level of urea hydrolysis observed in the experiments, the simulations predicted an enhanced calcium carbonate precipitation rate that was 3-4 times greater than the baseline level. Reactive transport modeling results, geophysical monitoring data and micro-CT imaging correlated well with reaction processes validated by geochemical data. In particular, increases in ionic strength of the pore fluid during urea hydrolysis predicted by geochemical modeling were successfully captured by electrical conductivity measurements and confirmed by geochemical data. The low level of urea hydrolysis and calcium carbonate precipitation suggested by the model and geochemical data was corroborated by minor changes in seismic P-wave velocity measurements and micro-CT imaging; the latter provided direct evidence of sparsely distributed calcium carbonate precipitation. Ion exchange processes promoted through NH4+ production during urea hydrolysis were incorporated in the model and captured critical changes in the major metal species. The electrical phase increases were potentially due to ion exchange processes that modified charge structure at mineral/water interfaces. Our study revealed the potential of geophysical monitoring for geochemical changes during urea hydrolysis and the advantages of combining multiple approaches to understand complex biogeochemical processes in the subsurface. PMID:21943229

  16. A review on the kinetics of microbially induced calcium carbonate precipitation by urea hydrolysis

    NASA Astrophysics Data System (ADS)

    van Paassen, L. A.

    2017-12-01

    In this study the kinetics of calcium carbonate precipitation induced by the ureolytic bacteria are reviewed based on experiments and mathematical modelling. The study shows how urea hydrolysis rate depends on the amount of bacteria and the conditions during growth, storage, hydrolysis and precipitation. The dynamics of Microbially Induced Carbonate Precipitation has been monitored in non-seeded liquid batch experiments. Results show that particulary for a fast hydrolysis of urea (>1 M-urea day-1) in a highly concentrated equimolar solution with calcium chloride (>0.25 M) the solubility product of CaCO3 is exceeded within a short period (less than 30 minutes), the supersaturation remains high for an exended period, resulting in prolonged periods of nucleation and crystal growth and extended growth of metastable precursor mineral phases. The pH, being a result of the speciation, quickly rises until critical supersaturation is reached and precipitation is initiated. Then pH drops (sometimes showing oscillating behaviour) to about neutral where it stays until all substrates are depleted. Higher hydrolysis rates lead to higher supersaturation and pH and relatively many small crystals, whereas higher concentrations of urea and calcium chloride mainly lead to lower pH values. The conversion can be reasonably monitored by electrical conductivity and reasonably predicted, using a simplified model based on a single reaction as long as the urea hydrolysis rate is known. Complex geochemical models, which include chemical speciciation through acid-base equilibria and kinetic equations to describe mineral precipitation, do not show significant difference from the simplified model regarding the bulk chemistry and the total amount of precipitates. However, experiments show that ureolytic MICP can result in a highly variable crystal morphologies with large variation in the affected hydraulic properties when applied in a porous medium. In order to calculate the number, size and type of crystals, use of these more complex models is essential. Quantitative prediction to a level at which the pH and conductivity are simulated accurately is not yet possible as experimental data regarding the interaction between existing mineral surfaces are the surface interaction between ions and micro-organisms is still lacking.

  17. The Role of Reticulate Evolution in Creating Innovation and Complexity

    PubMed Central

    Swithers, Kristen S.; Soucy, Shannon M.; Gogarten, J. Peter

    2012-01-01

    Reticulate evolution encompasses processes that conflict with traditional Tree of Life efforts. These processes, horizontal gene transfer (HGT), gene and whole-genome duplications through allopolyploidization, are some of the main driving forces for generating innovation and complexity. HGT has a profound impact on prokaryotic and eukaryotic evolution. HGTs can lead to the invention of new metabolic pathways and the expansion and enhancement of previously existing pathways. It allows for organismal adaptation into new ecological niches and new host ranges. Although many HGTs appear to be selected for because they provide some benefit to their recipient lineage, other HGTs may be maintained by chance through random genetic drift. Moreover, some HGTs that may initially seem parasitic in nature can cause complexity to arise through pathways of neutral evolution. Another mechanism for generating innovation and complexity, occurring more frequently in eukaryotes than in prokaryotes, is gene and genome duplications, which often occur through allopolyploidizations. We discuss how these different evolutionary processes contribute to generating innovation and complexity. PMID:22844638

  18. Sorting of a multi-subunit ubiquitin ligase complex in the endolysosome system

    PubMed Central

    Yang, Xi; Arines, Felichi Mae; Zhang, Weichao

    2018-01-01

    The yeast Dsc E3 ligase complex has long been recognized as a Golgi-specific protein ubquitination system. It shares a striking sequence similarity to the Hrd1 complex that plays critical roles in the ER-associated degradation pathway. Using biochemical purification and mass spectrometry, we identified two novel Dsc subunits, which we named as Gld1 and Vld1. Surprisingly, Gld1 and Vld1 do not coexist in the same complex. Instead, they compete with each other to form two functionally independent Dsc subcomplexes. The Vld1 subcomplex takes the AP3 pathway to reach the vacuole membrane, whereas the Gld1 subcomplex travels through the VPS pathway and is cycled between Golgi and endosomes by the retromer. Thus, instead of being Golgi-specific, the Dsc complex can regulate protein levels at three distinct organelles, namely Golgi, endosome, and vacuole. Our study provides a novel model of achieving multi-tasking for transmembrane ubiquitin ligases with interchangeable trafficking adaptors. PMID:29355480

  19. A novel noncovalent complex of chorismate mutase and DAHP synthase from Mycobacterium tuberculosis: protein purification, crystallization and X-ray diffraction analysis

    PubMed Central

    Ökvist, Mats; Sasso, Severin; Roderer, Kathrin; Kast, Peter; Krengel, Ute

    2009-01-01

    Chorismate mutase catalyzes a key step in the shikimate-biosynthetic pathway and hence is an essential enzyme in bacteria, plants and fungi. Mycobacterium tuberculosis contains two chorismate mutases, a secreted and an intracellular one, the latter of which (MtCM; Rv0948c; 90 amino-acid residues; 10 kDa) is the subject of this work. Here are reported the gene expression, purification and crystallization of MtCM alone and of its complex with another shikimate-pathway enzyme, DAHP synthase (MtDS; Rv2178c; 472 amino-acid residues; 52 kDa), which has been shown to enhance the catalytic efficiency of MtCM. The MtCM–MtDS complex represents the first noncovalent enzyme complex from the common shikimate pathway to be structurally characterized. Soaking experiments with a transition-state analogue are also reported. The crystals of MtCM and the MtCM–MtDS complex diffracted to 1.6 and 2.1 Å resolution, respectively. PMID:19851019

  20. Does antecedent precipitation play a role for floods in (small) Swiss catchments?

    NASA Astrophysics Data System (ADS)

    Froidevaux, Paul; Schwanbeck, Jan; Weingartner, Rolf; Chevalier, Clément; Romppainen-Martius, Olivia

    2014-05-01

    River flooding is one of the most devastating natural hazards worldwide. In Switzerland, like in many other regions, the building of flood protection infrastructures is complicated by difficulties in assessing flood risk due to: - The large year-to-year variability in flood losses. The variations amount to several orders of magnitude (see for ex. Hilker et al., 2009). - The non-stationarity of the flood risk at longer time scales. A pronounced decadal variability in flood risk has been observed by Schmocker-Fackel and Naef (2010) and Köplin et al. (2013) show that climate change will induce diverse and complex regional changes in flood risk. A better understanding of flood processes is therefore required in order to better predict changes in flood frequency. It has been hypothesized that flood frequency variations are linked to changes in the atmospheric circulation. Consequently, the whole mechanism chain starting from atmospheric circulation patterns triggering severe precipitation weather and ending with extreme river discharge must be considered. In a step in that direction we characterize precipitation events that triggered observed annual maximum discharges at 120 discharge stations during the last 53 years in Switzerland. The precipitation dataset is a temporally-homogeneous complex interpolation of daily rain gauge data on a 1 by 1 km grid covering the Swiss territory (MeteoSwiss, 2011). We test the relationship between different catchment-averaged precipitation indices and flood occurrence. We explicitly separate antecedent and event-associated precipitation. The preliminary results show that antecedent precipitation (weekly to monthly sums ending 3 days before the event) are no significant flood predictors for most of the catchments. On the other hand, a very strong signal is found for the 1-3 days precipitation sums. Lessons for flood modeling in Swiss catchments is that a strong effort is required in order to represent the flood-associated weather events correctly over a 1-3 day period -particularly the precipitation amounts- whereas antecedent precipitation is not a necessary precondition for flood building. In that sense, flood processes in Switzerland might contrast with extreme drought processes for which longer term precipitation statistics are expected to be important. Hilker, N., A. Badoux, and C. Hegg. 2009. The swiss flood and landslide damage database 1972-2007. Natural Hazards and Earth System Sciences 9, 913-925. Schmocker-Fackel, P., and F. Naef. 2010. More frequent flooding? changes in flood frequency in switzerland since 1850. Journal of hydrology 381, 1-8. 1,3 Köplin, N., Schädler, B., Viviroli, D. and Weingartner, R. 2013. Seasonality and magnitude of floods in Switzerland under future climate change. Hydrol. Process.. doi: 10.1002/hyp.9757 MeteoSwiss. 2011. Documentation of meteoswiss grid-data products. daily precipitation (final analysis): Rhiresd. available online at http://www.meteosuisse.admin.ch/web/de/services/datenportal/gitterdaten/precip.html.

Some links on this page may take you to non-federal websites. Their policies may differ from this site.
Top