Fast generation of complex modulation video holograms using temporal redundancy compression and hybrid point-source/wave-field approaches

NASA Astrophysics Data System (ADS)

Gilles, Antonin; Gioia, Patrick; Cozot, Rémi; Morin, Luce

2015-09-01

The hybrid point-source/wave-field method is a newly proposed approach for Computer-Generated Hologram (CGH) calculation, based on the slicing of the scene into several depth layers parallel to the hologram plane. The complex wave scattered by each depth layer is then computed using either a wave-field or a point-source approach according to a threshold criterion on the number of points within the layer. Finally, the complex waves scattered by all the depth layers are summed up in order to obtain the final CGH. Although outperforming both point-source and wave-field methods without producing any visible artifact, this approach has not yet been used for animated holograms, and the possible exploitation of temporal redundancies has not been studied. In this paper, we propose a fast computation of video holograms by taking into account those redundancies. Our algorithm consists of three steps. First, intensity and depth data of the current 3D video frame are extracted and compared with those of the previous frame in order to remove temporally redundant data. Then the CGH pattern for this compressed frame is generated using the hybrid point-source/wave-field approach. The resulting CGH pattern is finally transmitted to the video output and stored in the previous frame buffer. Experimental results reveal that our proposed method is able to produce video holograms at interactive rates without producing any visible artifact.

Complex vibratory patterns in an elephant larynx.

PubMed

Herbst, Christian T; Svec, Jan G; Lohscheller, Jörg; Frey, Roland; Gumpenberger, Michaela; Stoeger, Angela S; Fitch, W Tecumseh

2013-11-01

Elephants' low-frequency vocalizations are produced by flow-induced self-sustaining oscillations of laryngeal tissue. To date, little is known in detail about the vibratory phenomena in the elephant larynx. Here, we provide a first descriptive report of the complex oscillatory features found in the excised larynx of a 25 year old female African elephant (Loxodonta africana), the largest animal sound generator ever studied experimentally. Sound production was documented with high-speed video, acoustic measurements, air flow and sound pressure level recordings. The anatomy of the larynx was studied with computed tomography (CT) and dissections. Elephant CT vocal anatomy data were further compared with the anatomy of an adult human male. We observed numerous unusual phenomena, not typically reported in human vocal fold vibrations. Phase delays along both the inferior-superior and anterior-posterior (A-P) dimension were commonly observed, as well as transverse travelling wave patterns along the A-P dimension, previously not documented in the literature. Acoustic energy was mainly created during the instant of glottal opening. The vestibular folds, when adducted, participated in tissue vibration, effectively increasing the generated sound pressure level by 12 dB. The complexity of the observed phenomena is partly attributed to the distinct laryngeal anatomy of the elephant larynx, which is not simply a large-scale version of its human counterpart. Travelling waves may be facilitated by low fundamental frequencies and increased vocal fold tension. A travelling wave model is proposed, to account for three types of phenomena: A-P travelling waves, 'conventional' standing wave patterns, and irregular vocal fold vibration.

Spatio-temporal dynamics induced by competing instabilities in two asymmetrically coupled nonlinear evolution equations.

PubMed

Schüler, D; Alonso, S; Torcini, A; Bär, M

2014-12-01

Pattern formation often occurs in spatially extended physical, biological, and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and their characteristic length scales. However, patterns resulting from the simultaneous occurrence of instabilities cannot be expected to be simple superposition of the patterns associated with the considered instabilities. To address this issue, we design two simple models composed by two asymmetrically coupled equations of non-conserved (Swift-Hohenberg equations) or conserved (Cahn-Hilliard equations) order parameters with different characteristic wave lengths. The patterns arising in these systems range from coexisting static patterns of different wavelengths to traveling waves. A linear stability analysis allows to derive a two parameter phase diagram for the studied models, in particular, revealing for the Swift-Hohenberg equations, a co-dimension two bifurcation point of Turing and wave instability and a region of coexistence of stationary and traveling patterns. The nonlinear dynamics of the coupled evolution equations is investigated by performing accurate numerical simulations. These reveal more complex patterns, ranging from traveling waves with embedded Turing patterns domains to spatio-temporal chaos, and a wide hysteretic region, where waves or Turing patterns coexist. For the coupled Cahn-Hilliard equations the presence of a weak coupling is sufficient to arrest the coarsening process and to lead to the emergence of purely periodic patterns. The final states are characterized by domains with a characteristic length, which diverges logarithmically with the coupling amplitude.

Clustering of Synoptic Pattern over the Korean Peninsula from Meteorological Models

NASA Astrophysics Data System (ADS)

Kim, Jinah; Heo, Kiyoung; Choi, Jungwoon; Jung, Sanghoon

2017-04-01

Numerical modeling data on meteorological and ocean science is one of example of big geographic data sources. The properties of the data including the volume, variety, and dynamic aspects pose new challenges for geographic visualization, and visual geoanalytics using big data analysis using machine learning method. A combination of algorithmic and visual approaches that make sense of large volumes of various types of spatiotemporal data are required to gain knowledge about complex phenomena. In the East coast of Korea, it is suffering from property damages and human causalities due to abnormal high waves (swell-like high-height waves). It is known to be caused by local meteorological conditions on the East Sea of Korean Peninsula in previous research and they proposed three kinds of pressure patterns that generate abnormal high waves. However, they cannot describe all kinds of pressure patterns that generate abnormal high waves. In our study, we propose unsupervised machine learning method for pattern clustering and applied it to classify a pattern which has occurred abnormal high waves using numerical meteorological model's reanalysis data from 2000 to 2015 and past historical records of accidents by abnormal high waves. About 25,000 patterns of total spatial distribution of sea surface pressure are clustered into 30 patterns and they are classified into seasonal sea level pressure patterns based on meteorological characteristics of Korean peninsula. Moreover, in order to determine the representative patterns which occurs abnormal high waves, we classified it again using historical accidents cases among the winter season pressure patterns. In this work, we clustered synoptic pattern over the Korean Peninsula in meteorological modeling reanalysis data and we could understand a seasonal variation through identifying the occurrence of clustered synoptic pattern. For the future work, we have to identify the relationship of wave modeling data for better understanding of abnormal high waves and we will develop pattern decision system to predict abnormal high waves in advances. This research was a part of the project titled "Development of Korea Operational Oceanographic System (KOOS), Phase 2" and "Investigation of Large Swell Waves and Rip currents and Development of The Disaster Response System," funded by the Ministry of Oceans & Fisheries Korea (Grant PM59691 and PM59240).

Module Based Complexity Formation: Periodic Patterning in Feathers and Hairs

PubMed Central

Chuong, Cheng-Ming; Yeh, Chao-Yuan; Jiang, Ting-Xin; Widelitz, Randall

2012-01-01

Patterns describe order which emerges from homogeneity. Complex patterns on the integument are striking because of their visibility throughout an organism's lifespan. Periodic patterning is an effective design because the ensemble of hair or feather follicles (modules) allows the generation of complexity, including regional variations and cyclic regeneration, giving the skin appendages a new lease on life. Spatial patterns include the arrangements of feathers and hairs in specified number, size, and spacing. We explore how a field of equivalent progenitor cells can generate periodically arranged modules based on genetic information, physical-chemical rules and developmental timing. Reconstitution experiments suggest a competitive equilibrium regulated by activators / inhibitors involving Turing reaction-diffusion. Temporal patterns result from oscillating stem cell activities within each module (micro-environment regulation), reflected as growth (anagen) and resting (telogen) phases during the cycling of feather and hair follicles. Stimulating modules with activators initiates the spread of regenerative hair waves, while global inhibitors outside each module (macro-environment) prevent this. Different wave patterns can be simulated by Cellular Automata principles. Hormonal status and seasonal changes can modulate appendage phenotypes, leading to “organ metamorphosis”, with multiple ectodermal organ phenotypes generated from the same precursors. We discuss potential evolutionary novel steps using this module based complexity in several amniote integument organs, exemplified by the spectacular peacock feather pattern. We thus explore the application of the acquired knowledge of patterning in tissue engineering. New hair follicles can be generated after wounding. Hairs and feathers can be reconstituted through self-organization of dissociated progenitor cells. PMID:23539312

Module-based complexity formation: periodic patterning in feathers and hairs.

PubMed

Chuong, Cheng-Ming; Yeh, Chao-Yuan; Jiang, Ting-Xin; Widelitz, Randall

2013-01-01

Patterns describe order which emerges from homogeneity. Complex patterns on the integument are striking because of their visibility throughout an organism’s lifespan. Periodic patterning is an effective design because the ensemble of hair or feather follicles (modules) allows the generation of complexity, including regional variations and cyclic regeneration, giving the skin appendages a new lease on life. Spatial patterns include the arrangements of feathers and hairs in specific number, size, and spacing.We explorehowa field of equivalent progenitor cells can generate periodically arranged modules based on genetic information, physical–chemical rules and developmental timing. Reconstitution experiments suggest a competitive equilibrium regulated by activators/inhibitors involving Turing reaction-diffusion. Temporal patterns result from oscillating stem cell activities within each module (microenvironment regulation), reflected as growth (anagen) and resting (telogen) phases during the cycling of feather and hair follicles. Stimulating modules with activators initiates the spread of regenerative hair waves, while global inhibitors outside each module (macroenvironment) prevent this. Different wave patterns can be simulated by cellular automata principles. Hormonal status and seasonal changes can modulate appendage phenotypes, leading to ‘organ metamorphosis’, with multiple ectodermal organ phenotypes generated from the same precursors. We discuss potential novel evolutionary steps using this module-based complexity in several amniote integument organs, exemplified by the spectacular peacock feather pattern. We thus explore the application of the acquired knowledge of patterning in tissue engineering. New hair follicles can be generated after wounding. Hairs and feathers can be reconstituted through self-organization of dissociated progenitor cells. © 2012 Wiley Periodicals, Inc.

Surface Acoustic Waves Grant Superior Spatial Control of Cells Embedded in Hydrogel Fibers.

PubMed

Lata, James P; Guo, Feng; Guo, Jinshan; Huang, Po-Hsun; Yang, Jian; Huang, Tony Jun

2016-10-01

By exploiting surface acoustic waves and a coupling layer technique, cells are patterned within a photosensitive hydrogel fiber to mimic physiological cell arrangement in tissues. The aligned cell-polymer matrix is polymerized with short exposure to UV light and the fiber is extracted. These patterned cell fibers are manipulated into simple and complex architectures, demonstrating feasibility for tissue-engineering applications. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Nonlinear ring resonator: spatial pattern generation

NASA Astrophysics Data System (ADS)

Ivanov, Vladimir Y.; Lachinova, Svetlana L.; Irochnikov, Nikita G.

2000-03-01

We consider theoretically spatial pattern formation processes in a unidirectional ring cavity with thin layer of Kerr-type nonlinear medium. Our method is based on studying of two coupled equations. The first is a partial differential equation for temporal dynamics of phase modulation of light wave in the medium. It describes nonlinear interaction in the Kerr-type lice. The second is a free propagation equation for the intracavity field complex amplitude. It involves diffraction effects of light wave in the cavity.

Self-Organization of Embryonic Genetic Oscillators into Spatiotemporal Wave Patterns

PubMed Central

Tsiairis, Charisios D.; Aulehla, Alexander

2016-01-01

Summary In vertebrate embryos, somites, the precursor of vertebrae, form from the presomitic mesoderm (PSM), which is composed of cells displaying signaling oscillations. Cellular oscillatory activity leads to periodic wave patterns in the PSM. Here, we address the origin of such complex wave patterns. We employed an in vitro randomization and real-time imaging strategy to probe for the ability of cells to generate order from disorder. We found that, after randomization, PSM cells self-organized into several miniature emergent PSM structures (ePSM). Our results show an ordered macroscopic spatial arrangement of ePSM with evidence of an intrinsic length scale. Furthermore, cells actively synchronize oscillations in a Notch-signaling-dependent manner, re-establishing wave-like patterns of gene activity. We demonstrate that PSM cells self-organize by tuning oscillation dynamics in response to surrounding cells, leading to collective synchronization with an average frequency. These findings reveal emergent properties within an ensemble of coupled genetic oscillators. PMID:26871631

Noise reduction in digital holography based on a filtering algorithm

NASA Astrophysics Data System (ADS)

Zhang, Wenhui; Cao, Liangcai; Zhang, Hua; Jin, Guofan; Brady, David

2018-02-01

Holography is a tool to record the object wavefront by interference. Complex amplitude of the object wave is coded into a two dimensional hologram. Unfortunately, the conjugate wave and background wave would also appear at the object plane during reconstruction, as noise, which blurs the reconstructed object. From the perspective of wave, we propose a filtering algorithm to get a noise-reduced reconstruction. Due to the fact that the hologram is a kind of amplitude grating, three waves would appear when reconstruction, which are object wave, conjugate wave and background wave. The background is easy to eliminate by frequency domain filtering. The object wave and conjugate wave are signals to be dealt with. These two waves, as a whole, propagate in the space. However, when detected at the original object plane, the object wave would diffract into a sparse pattern while the conjugate wave would diffract into a diffused pattern forming the noise. Hence, the noise can be reduced based on these difference with a filtering algorithm. Both amplitude and phase distributions are truthfully retrieved in our simulation and experimental demonstration.

Links of the significant wave height distribution in the Mediterranean sea with the Northern Hemisphere teleconnection patterns

NASA Astrophysics Data System (ADS)

Lionello, P.; Galati, M. B.

2008-06-01

This study analyzes the link between the SWH (Significant Wave Height) distribution in the Mediterranean Sea during the second half of the 20th century and the Northern Hemisphere SLP (Sea Level Pressure) teleconnection patterns. The SWH distribution is computed using the WAM (WAve Model) forced by the surface wind fields provided by the ERA-40 reanalysis for the period 1958-2001. The time series of mid-latitude teleconnection patterns are downloaded from the NOAA web site. This study shows that several mid-latitude patterns are linked to the SWH field in the Mediterranean, especially in its western part during the cold season: East Atlantic Pattern (EA), Scandinavian Pattern (SCA), North Atlantic Oscillation (NAO), East Atlantic/West Russia Pattern (EA/WR) and East Pacific/ North Pacific Pattern (EP/NP). Though the East Atlantic pattern exerts the largest influence, it is not sufficient to characterize the dominant variability. NAO, though relevant, has an effect smaller than EA and comparable to other patterns. Some link results from possibly spurious structures. Patterns which have a very different global structure are associated to similar spatial features of the wave variability in the Mediterranean Sea. These two problems are, admittedly, shortcomings of this analysis, which shows the complexity of the response of the Mediterranean SWH to global scale SLP teleconnection patterns.

Alternans and Spiral Breakup in an Excitable Reaction-Diffusion System: A Simulation Study

PubMed Central

Gani, M. Osman; Ogawa, Toshiyuki

2014-01-01

The determination of the mechanisms of spiral breakup in excitable media is still an open problem for researchers. In the context of cardiac electrophysiological activities, spiral breakup exhibits complex spatiotemporal pattern known as ventricular fibrillation. The latter is the major cause of sudden cardiac deaths all over the world. In this paper, we numerically study the instability of periodic planar traveling wave solution in two dimensions. The emergence of stable spiral pattern is observed in the considered model. This pattern occurs when the heart is malfunctioning (i.e., ventricular tachycardia). We show that the spiral wave breakup is a consequence of the transverse instability of the planar traveling wave solutions. The alternans, that is, the oscillation of pulse widths, is observed in our simulation results. Moreover, we calculate the widths of spiral pulses numerically and observe that the stable spiral pattern bifurcates to an oscillatory wave pattern in a one-parameter family of solutions. The spiral breakup occurs far below the bifurcation when the maximum and the minimum excited states become more distinct, and hence the alternans becomes more pronounced. PMID:27379274

Alternans and Spiral Breakup in an Excitable Reaction-Diffusion System: A Simulation Study.

PubMed

Gani, M Osman; Ogawa, Toshiyuki

2014-01-01

The determination of the mechanisms of spiral breakup in excitable media is still an open problem for researchers. In the context of cardiac electrophysiological activities, spiral breakup exhibits complex spatiotemporal pattern known as ventricular fibrillation. The latter is the major cause of sudden cardiac deaths all over the world. In this paper, we numerically study the instability of periodic planar traveling wave solution in two dimensions. The emergence of stable spiral pattern is observed in the considered model. This pattern occurs when the heart is malfunctioning (i.e., ventricular tachycardia). We show that the spiral wave breakup is a consequence of the transverse instability of the planar traveling wave solutions. The alternans, that is, the oscillation of pulse widths, is observed in our simulation results. Moreover, we calculate the widths of spiral pulses numerically and observe that the stable spiral pattern bifurcates to an oscillatory wave pattern in a one-parameter family of solutions. The spiral breakup occurs far below the bifurcation when the maximum and the minimum excited states become more distinct, and hence the alternans becomes more pronounced.

Spectral singularities and Bragg scattering in complex crystals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Longhi, S.

2010-02-15

Spectral singularities that spoil the completeness of Bloch-Floquet states may occur in non-Hermitian Hamiltonians with complex periodic potentials. Here an equivalence is established between spectral singularities in complex crystals and secularities that arise in Bragg diffraction patterns. Signatures of spectral singularities in a scattering process with wave packets are elucidated for a PT-symmetric complex crystal.

Local control of globally competing patterns in coupled Swift-Hohenberg equations

NASA Astrophysics Data System (ADS)

Becker, Maximilian; Frenzel, Thomas; Niedermayer, Thomas; Reichelt, Sina; Mielke, Alexander; Bär, Markus

2018-04-01

We present analytical and numerical investigations of two anti-symmetrically coupled 1D Swift-Hohenberg equations (SHEs) with cubic nonlinearities. The SHE provides a generic formulation for pattern formation at a characteristic length scale. A linear stability analysis of the homogeneous state reveals a wave instability in addition to the usual Turing instability of uncoupled SHEs. We performed weakly nonlinear analysis in the vicinity of the codimension-two point of the Turing-wave instability, resulting in a set of coupled amplitude equations for the Turing pattern as well as left- and right-traveling waves. In particular, these complex Ginzburg-Landau-type equations predict two major things: there exists a parameter regime where multiple different patterns are stable with respect to each other and that the amplitudes of different patterns interact by local mutual suppression. In consequence, different patterns can coexist in distinct spatial regions, separated by localized interfaces. We identified specific mechanisms for controlling the position of these interfaces, which distinguish what kinds of patterns the interface connects and thus allow for global pattern selection. Extensive simulations of the original SHEs confirm our results.

Spatio-temporal dynamics induced by competing instabilities in two asymmetrically coupled nonlinear evolution equations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schüler, D.; Alonso, S.; Bär, M.

2014-12-15

Pattern formation often occurs in spatially extended physical, biological, and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and their characteristic length scales. However, patterns resulting from the simultaneous occurrence of instabilities cannot be expected to be simple superposition of the patterns associated with the considered instabilities. To address this issue, we design two simple models composed by two asymmetrically coupled equations of non-conserved (Swift-Hohenberg equations) or conserved (Cahn-Hilliard equations) order parameters with different characteristic wave lengths. The patterns arising in these systems range from coexistingmore » static patterns of different wavelengths to traveling waves. A linear stability analysis allows to derive a two parameter phase diagram for the studied models, in particular, revealing for the Swift-Hohenberg equations, a co-dimension two bifurcation point of Turing and wave instability and a region of coexistence of stationary and traveling patterns. The nonlinear dynamics of the coupled evolution equations is investigated by performing accurate numerical simulations. These reveal more complex patterns, ranging from traveling waves with embedded Turing patterns domains to spatio-temporal chaos, and a wide hysteretic region, where waves or Turing patterns coexist. For the coupled Cahn-Hilliard equations the presence of a weak coupling is sufficient to arrest the coarsening process and to lead to the emergence of purely periodic patterns. The final states are characterized by domains with a characteristic length, which diverges logarithmically with the coupling amplitude.« less

Wave reflection in a reaction-diffusion system: breathing patterns and attenuation of the echo.

PubMed

Tsyganov, M A; Ivanitsky, G R; Zemskov, E P

2014-05-01

Formation and interaction of the one-dimensional excitation waves in a reaction-diffusion system with the piecewise linear reaction functions of the Tonnelier-Gerstner type are studied. We show that there exists a parameter region where the established regime of wave propagation depends on initial conditions. Wave phenomena with a complex behavior are found: (i) the reflection of waves at a growing distance (the remote reflection) upon their collision with each other or with no-flux boundaries and (ii) the periodic transformation of waves with the jumping from one regime of wave propagation to another (the periodic trigger wave).

Wave reflection in a reaction-diffusion system: Breathing patterns and attenuation of the echo

NASA Astrophysics Data System (ADS)

Tsyganov, M. A.; Ivanitsky, G. R.; Zemskov, E. P.

2014-05-01

Formation and interaction of the one-dimensional excitation waves in a reaction-diffusion system with the piecewise linear reaction functions of the Tonnelier-Gerstner type are studied. We show that there exists a parameter region where the established regime of wave propagation depends on initial conditions. Wave phenomena with a complex behavior are found: (i) the reflection of waves at a growing distance (the remote reflection) upon their collision with each other or with no-flux boundaries and (ii) the periodic transformation of waves with the jumping from one regime of wave propagation to another (the periodic trigger wave).

Nonlinear amplification of coherent waves in media with soliton-type refractive index pattern.

PubMed

Bugaychuk, S; Conte, R

2012-08-01

We derive the complex Ginzburg-Landau equation for the dynamical self-diffraction of optical waves in a nonlinear cavity. The case of the reflection geometry of wave interaction as well as a medium that possesses the cubic nonlinearity (including a local and a nonlocal nonlinear responses) and the relaxation is considered. A stable localized spatial structure in the form of a "dark" dissipative soliton is formed in the cavity in the steady state. The envelope of the intensity pattern, as well as of the dynamical grating amplitude, takes the shape of a tanh function. The obtained complex Ginzburg-Landau equation describes the dynamics of this envelope; at the same time, the evolution of this spatial structure changes the parameters of the output waves. New effects are predicted in this system due to the transformation of the dissipative soliton which takes place during the interaction of a pulse with a continuous wave, such as retention of the pulse shape during the transmission of impulses in a long nonlinear cavity, and giant amplification of a seed pulse, which takes energy due to redistribution of the pump continuous energy into the signal.

Application of Dynamic Logic Algorithm to Inverse Scattering Problems Related to Plasma Diagnostics

NASA Astrophysics Data System (ADS)

Perlovsky, L.; Deming, R. W.; Sotnikov, V.

2010-11-01

In plasma diagnostics scattering of electromagnetic waves is widely used for identification of density and wave field perturbations. In the present work we use a powerful mathematical approach, dynamic logic (DL), to identify the spectra of scattered electromagnetic (EM) waves produced by the interaction of the incident EM wave with a Langmuir soliton in the presence of noise. The problem is especially difficult since the spectral amplitudes of the noise pattern are comparable with the amplitudes of the scattered waves. In the past DL has been applied to a number of complex problems in artificial intelligence, pattern recognition, and signal processing, resulting in revolutionary improvements. Here we demonstrate its application to plasma diagnostic problems. [4pt] Perlovsky, L.I., 2001. Neural Networks and Intellect: using model-based concepts. Oxford University Press, New York, NY.

An experimental investigation of the impingement of a planar shock wave on an axisymmetric body at Mach 3

NASA Technical Reports Server (NTRS)

Brosh, A.; Kussoy, M. I.

1983-01-01

An experimental study of the flow caused by a planar shock wave impinging obliquely on a cylinder is presented. The complex three dimensional shock wave and boundary layer interaction occurring in practical problems, such as the shock wave impingement from the shuttle nose on an external fuel tank, and store carriage interference on a supersonic tactical aircraft were investigated. A data base for numerical computations of complex flows was also investigated. The experimental techniques included pressure measurements and oil flow patterns on the surface of the cylinder, and shadowgraphs and total and static pressure surveys on the leeward and windward planes of symmetry. The complete data is presented in tabular form. The results reveal a highly complex flow field with two separation zones, regions of high crossflow, and multiple reflected shocks and expansion fans.

Nonlinear periodic wavetrains in thin liquid films falling on a uniformly heated horizontal plate

NASA Astrophysics Data System (ADS)

Issokolo, Remi J. Noumana; Dikandé, Alain M.

2018-05-01

A thin liquid film falling on a uniformly heated horizontal plate spreads into fingering ripples that can display a complex dynamics ranging from continuous waves, nonlinear spatially localized periodic wave patterns (i.e., rivulet structures) to modulated nonlinear wavetrain structures. Some of these structures have been observed experimentally; however, conditions under which they form are still not well understood. In this work, we examine profiles of nonlinear wave patterns formed by a thin liquid film falling on a uniformly heated horizontal plate. For this purpose, the Benney model is considered assuming a uniform temperature distribution along the film propagation on the horizontal surface. It is shown that for strong surface tension but a relatively small Biot number, spatially localized periodic-wave structures can be analytically obtained by solving the governing equation under appropriate conditions. In the regime of weak nonlinearity, a multiple-scale expansion combined with the reductive perturbation method leads to a complex Ginzburg-Landau equation: the solutions of which are modulated periodic pulse trains which amplitude and width and period are expressed in terms of characteristic parameters of the model.

Dynamic Skin Patterns in Cephalopods

PubMed Central

How, Martin J.; Norman, Mark D.; Finn, Julian; Chung, Wen-Sung; Marshall, N. Justin

2017-01-01

Cephalopods are unrivaled in the natural world in their ability to alter their visual appearance. These mollusks have evolved a complex system of dermal units under neural, hormonal, and muscular control to produce an astonishing variety of body patterns. With parallels to the pixels on a television screen, cephalopod chromatophores can be coordinated to produce dramatic, dynamic, and rhythmic displays, defined collectively here as “dynamic patterns.” This study examines the nature, context, and potential functions of dynamic patterns across diverse cephalopod taxa. Examples are presented for 21 species, including 11 previously unreported in the scientific literature. These range from simple flashing or flickering patterns, to highly complex passing wave patterns involving multiple skin fields. PMID:28674500

Calcium spikes, waves and oscillations in a large, patterned epithelial tissue

PubMed Central

Balaji, Ramya; Bielmeier, Christina; Harz, Hartmann; Bates, Jack; Stadler, Cornelia; Hildebrand, Alexander; Classen, Anne-Kathrin

2017-01-01

While calcium signaling in excitable cells, such as muscle or neurons, is extensively characterized, calcium signaling in epithelial tissues is little understood. Specifically, the range of intercellular calcium signaling patterns elicited by tightly coupled epithelial cells and their function in the regulation of epithelial characteristics are little explored. We found that in Drosophila imaginal discs, a widely studied epithelial model organ, complex spatiotemporal calcium dynamics occur. We describe patterns that include intercellular waves traversing large tissue domains in striking oscillatory patterns as well as spikes confined to local domains of neighboring cells. The spatiotemporal characteristics of intercellular waves and oscillations arise as emergent properties of calcium mobilization within a sheet of gap-junction coupled cells and are influenced by cell size and environmental history. While the in vivo function of spikes, waves and oscillations requires further characterization, our genetic experiments suggest that core calcium signaling components guide actomyosin organization. Our study thus suggests a possible role for calcium signaling in epithelia but importantly, introduces a model epithelium enabling the dissection of cellular mechanisms supporting the initiation, transmission and regeneration of long-range intercellular calcium waves and the emergence of oscillations in a highly coupled multicellular sheet. PMID:28218282

Lamina-specific contribution of glutamatergic and GABAergic potentials to hippocampal sharp wave-ripple complexes.

PubMed

Schönberger, Jan; Draguhn, Andreas; Both, Martin

2014-01-01

The mammalian hippocampus expresses highly organized patterns of neuronal activity which form a neuronal correlate of spatial memories. These memory-encoding neuronal ensembles form on top of different network oscillations which entrain neurons in a state- and experience-dependent manner. The mechanisms underlying activation, timing and selection of participating neurons are incompletely understood. Here we studied the synaptic mechanisms underlying one prominent network pattern called sharp wave-ripple complexes (SPW-R) which are involved in memory consolidation during sleep. We recorded SPW-R with extracellular electrodes along the different layers of area CA1 in mouse hippocampal slices. Contribution of glutamatergic excitation and GABAergic inhibition, respectively, was probed by local application of receptor antagonists into s. radiatum, pyramidale and oriens. Laminar profiles of field potentials show that GABAergic potentials contribute substantially to sharp waves and superimposed ripple oscillations in s. pyramidale. Inhibitory inputs to s. pyramidale and s. oriens are crucial for action potential timing by ripple oscillations, as revealed by multiunit-recordings in the pyramidal cell layer. Glutamatergic afferents, on the other hand, contribute to sharp waves in s. radiatum where they also evoke a fast oscillation at ~200 Hz. Surprisingly, field ripples in s. radiatum are slightly slower than ripples in s. pyramidale, resulting in a systematic shift between dendritic and somatic oscillations. This complex interplay between dendritic excitation and perisomatic inhibition may be responsible for the precise timing of discharge probability during the time course of SPW-R. Together, our data illustrate a complementary role of spatially confined excitatory and inhibitory transmission during highly ordered network patterns in the hippocampus.

The response of plasma density to breaking inertial gravity wave in the lower regions of ionosphere

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, Wenbo, E-mail: Wenbo.Tang@asu.edu; Mahalov, Alex, E-mail: Alex.Mahalov@asu.edu

2014-04-15

We present a three-dimensional numerical study for the E and lower F region ionosphere coupled with the neutral atmosphere dynamics. This model is developed based on a previous ionospheric model that examines the transport patterns of plasma density given a prescribed neutral atmospheric flow. Inclusion of neutral dynamics in the model allows us to examine the charge-neutral interactions over the full evolution cycle of an inertial gravity wave when the background flow spins up from rest, saturates and eventually breaks. Using Lagrangian analyses, we show the mixing patterns of the ionospheric responses and the formation of ionospheric layers. The correspondingmore » plasma density in this flow develops complex wave structures and small-scale patches during the gravity wave breaking event.« less

Correlation of field seismic refraction data with 3-D laboratory ultrasonic sounding data during exploration of a dimension stone deposit

NASA Astrophysics Data System (ADS)

Přikryl, Richard; Vilhelm, Jan; Lokajíček, Tomáš; Pros, Zdeněk; Klíma, Karel

2004-05-01

Multidirectional field seismic refraction data have been combined with 3-D laboratory ultrasonic sounding data in a preliminary exploration of a new dimension stone deposit in the Czech Republic. Rock fabric was interpreted from a detailed laboratory analysis of a 3-D P-wave velocity pattern and can be classified as pronounced orthorhombic due to a complex tectonometamorphic history of the rock. The P-wave velocity pattern recorded from laboratory measurements can be satisfactorily correlated with the anisotropy of P-wave velocity data acquired from field seismic refraction data. Rock fabric anisotropy also contributes to the observed anisotropy of strength and static deformational properties.

Electromagnetic scattering by impedance structures

NASA Technical Reports Server (NTRS)

Balanis, Constantine A.; Griesser, Timothy

1987-01-01

The scattering of electromagnetic waves from impedance structures is investigated, and current work on antenna pattern calculation is presented. A general algorithm for determining radiation patterns from antennas mounted near or on polygonal plates is presented. These plates are assumed to be of a material which satisfies the Leontovich (or surface impedance) boundary condition. Calculated patterns including reflection and diffraction terms are presented for numerious geometries, and refinements are included for antennas mounted directly on impedance surfaces. For the case of a monopole mounted on a surface impedance ground plane, computed patterns are compared with experimental measurements. This work in antenna pattern prediction forms the basis of understanding of the complex scattering mechanisms from impedance surfaces. It provides the foundation for the analysis of backscattering patterns which, in general, are more problematic than calculation of antenna patterns. Further proposed study of related topics, including surface waves, corner diffractions, and multiple diffractions, is outlined.

Major dust storms and westward traveling waves on Mars

NASA Astrophysics Data System (ADS)

Wang, Huiqun

2017-04-01

Westward traveling waves are observed during major dust storm periods in northern fall and winter. The close correlation in timing makes westward traveling wave one of the signature responses of the Martian atmosphere to major dust storms. Westward traveling waves are dominated by zonal wave number m = 1 in the middle atmosphere and are typically characterized by long wave period. They are associated with significant temperature perturbations near the edge of the north polar vortex. Their wind signals extend to the low latitudes and the southern hemisphere. Their eddy momentum and heat fluxes exhibit complex patterns on a global scale in the middle atmosphere.

Morphodynamics of an eroding beach and foredune in the Mekong River delta: Implications for deltaic shoreline change

NASA Astrophysics Data System (ADS)

Anthony, E. J.; Dussouillez, P.; Dolique, F.; Besset, M.; Brunier, G.; Nguyen, V. L.; Goichot, M.

2017-09-01

River delta shorelines composed of sand may be characterized by complex spatial and temporal patterns of erosion and accretion even when sand supply is readily available. This is especially the case for deltas with multiple mouths subject to significant wave and tide influence. High-resolution topographical and wave and current measurements were conducted from 2010 to 2012 at Ba Dông beach, a popular resort located on the largest of the multiple inter-distributary plains of the Mekong River delta. Ba Dông beach is a mesotidal, multiple bar-trough system. The upper beach corresponds to the current active beach ridge in the sequence of ridges that have marked the progradation of the inter-distributary delta plains, and is capped by a low foredune that protects villages and agricultural land from marine flooding. During the low river-flow season, the beach is characterized by Northeast monsoon waves and strong longshore currents that transport sediment towards the southwest. Weaker longshore currents towards the northeast are generated by Southwest monsoon waves during the high river-flow season. Ba Dông beach underwent strong erosion between 2010 and 2012, following a phase of massive accretion. In 2012, this erosion resulted in breaching of the foredune, contributing to concerns that the Mekong delta had become vulnerable to retreat. The local erosion at Ba Dông needs to be considered, however, in the broader context of delta shoreline morphodynamics, which involves space- and time-varying patterns of beach accretion and erosion. These patterns are the present expressions of plan-view beach-ridge morphology in the delta, which is characterized by flaring and truncations that reflect changing beach morphodynamics in the course of deltaic progradation. We surmise that these patterns are related to complex interactions involving river water and sediment discharge, waves and wave-generated longshore currents, tidal currents, and shoreline orientation.

Family structure, nonresident father involvement, and adolescent eating patterns.

PubMed

Stewart, Susan D; Menning, Chadwick L

2009-08-01

To examine the relationship between family structure, nonresident father involvement, and adolescent eating patterns. Analyses were performed on data from Waves 1 and 2 of the National Longitudinal Study of Adolescent Health (Wave 1, N = approximately 15,550; Wave 2, N = approximately 11,540), and a subsample of adolescents from each wave who had a nonresident father (Wave 1, N = approximately 3,745; Wave 2, N = 2,358). Multivariate regression provides estimates of the independent effects of family structure and nonresident father involvement on adolescent eating patterns while controlling for potentially confounding sociodemographic characteristics. Compared with children in traditional households (i.e., two biological or adoptive parents), adolescents in nontraditional family households (single parent, step-parent, no parent) were more likely to display unhealthy eating habits such as skipping breakfast and lunch, eating fewer vegetables, consuming more fast food, and had less parental monitoring of meals. Nonresident father involvement was associated with an increased frequency of eating breakfast and lunch and increased consumption of vegetables (Wave 1) but did not affect adolescents' consumption of fast food. Child support was positively associated with the odds that adolescents would consume dinner. Adolescents in living in nontraditional families were more likely than adolescents living with two biological/adoptive parents to display unhealthy eating habits. Nonresident father involvement was generally associated with healthier eating patterns. Health professionals should keep in mind that children's and adolescents' living arrangements can be complex and have the potential to affect what and how they eat.

A Continuum Model of Actin Waves in Dictyostelium discoideum

PubMed Central

Khamviwath, Varunyu; Hu, Jifeng; Othmer, Hans G.

2013-01-01

Actin waves are complex dynamical patterns of the dendritic network of filamentous actin in eukaryotes. We developed a model of actin waves in PTEN-deficient Dictyostelium discoideum by deriving an approximation of the dynamics of discrete actin filaments and combining it with a signaling pathway that controls filament branching. This signaling pathway, together with the actin network, contains a positive feedback loop that drives the actin waves. Our model predicts the structure, composition, and dynamics of waves that are consistent with existing experimental evidence, as well as the biochemical dependence on various protein partners. Simulation suggests that actin waves are initiated when local actin network activity, caused by an independent process, exceeds a certain threshold. Moreover, diffusion of proteins that form a positive feedback loop with the actin network alone is sufficient for propagation of actin waves at the observed speed of . Decay of the wave back can be caused by scarcity of network components, and the shape of actin waves is highly dependent on the filament disassembly rate. The model allows retraction of actin waves and captures formation of new wave fronts in broken waves. Our results demonstrate that a delicate balance between a positive feedback, filament disassembly, and local availability of network components is essential for the complex dynamics of actin waves. PMID:23741312

Excito-oscillatory dynamics as a mechanism of ventricular fibrillation.

PubMed

Gray, Richard A; Huelsing, Delilah J

2008-04-01

The instabilities associated with reentrant spiral waves are of paramount importance to the initiation and maintenance of tachyarrhythmias, especially ventricular fibrillation (VF). In addition to tissue heterogeneities, there are only a few basic purported mechanisms of spiral wave breakup, most notably restitution. We test the hypothesis that oscillatory membrane properties act to destabilize spiral waves. We recorded transmembrane potential (V(m)) from isolated rabbit myocytes using a constant current stimulation protocol. We developed a mathematical model that included both the stable excitable equilibrium point at resting V(m) (-80 mV) and the unstable oscillatory equilibrium point at elevated V(m) (-10 mV). Spiral wave dynamics were studied in 2-dimensional grids using variants of the model. All models showed restitution and reproduced the experimental values of transmembrane resistance at rest and during the action potential plateau. Stable spiral waves were observed when the model showed only 1 equilibrium point. However, spatio-temporal complexity was observed if the model showed both excitable and oscillatory equilibrium points (i.e., excito-oscillatory models). The initial wave breaks resulted from oscillatory waves expanding in all directions; after a few beats, the patterns were characterized by a combination of unstable spiral waves and target patterns consistent with the patterns observed on the heart surface during VF. In our model, this VF-like activity only occurred when the single cell period of V(m) oscillations was within a specific range. The VF-like patterns observed in our excito-oscillatory models could not be explained by the existing proposed instability mechanisms. Our results introduce the important suggestion that membrane dynamics responsible for V(m) oscillations at elevated V(m) levels can destabilize spiral waves and thus may be a novel therapeutic target for preventing VF.

Consciousness and Complexity during Unresponsiveness Induced by Propofol, Xenon, and Ketamine.

PubMed

Sarasso, Simone; Boly, Melanie; Napolitani, Martino; Gosseries, Olivia; Charland-Verville, Vanessa; Casarotto, Silvia; Rosanova, Mario; Casali, Adenauer Girardi; Brichant, Jean-Francois; Boveroux, Pierre; Rex, Steffen; Tononi, Giulio; Laureys, Steven; Massimini, Marcello

2015-12-07

A common endpoint of general anesthetics is behavioral unresponsiveness, which is commonly associated with loss of consciousness. However, subjects can become disconnected from the environment while still having conscious experiences, as demonstrated by sleep states associated with dreaming. Among anesthetics, ketamine is remarkable in that it induces profound unresponsiveness, but subjects often report "ketamine dreams" upon emergence from anesthesia. Here, we aimed at assessing consciousness during anesthesia with propofol, xenon, and ketamine, independent of behavioral responsiveness. To do so, in 18 healthy volunteers, we measured the complexity of the cortical response to transcranial magnetic stimulation (TMS)--an approach that has proven helpful in assessing objectively the level of consciousness irrespective of sensory processing and motor responses. In addition, upon emergence from anesthesia, we collected reports about conscious experiences during unresponsiveness. Both frontal and parietal TMS elicited a low-amplitude electroencephalographic (EEG) slow wave corresponding to a local pattern of cortical activation with low complexity during propofol anesthesia, a high-amplitude EEG slow wave corresponding to a global, stereotypical pattern of cortical activation with low complexity during xenon anesthesia, and a wakefulness-like, complex spatiotemporal activation pattern during ketamine anesthesia. Crucially, participants reported no conscious experience after emergence from propofol and xenon anesthesia, whereas after ketamine they reported long, vivid dreams unrelated to the external environment. These results are relevant because they suggest that brain complexity may be sensitive to the presence of disconnected consciousness in subjects who are considered unconscious based on behavioral responses. Copyright © 2015 Elsevier Ltd. All rights reserved.

Wave Forcing of Saturn's Equatorial Oscillation

NASA Technical Reports Server (NTRS)

Flasar, F. M.; Schlinder, P. J.; Guerlet, S.; Fouchet, T.

2011-01-01

Ground-based measurements and Cassini data from CIRS thermal-infrared spectra and radio-occultation soundings have characterized the spatial structure and temporal behavior of a 15-year equatorial oscillation in Saturn's stratosphere. The equatorial region displays a vertical pattern of alternating warm and cold anomalies and, concomitantly, easterly and westerly winds relative to the cloud-top winds, with a peak-to-peak amplitude of 200 m/s. Comparison of the Cassini data over a four-year period has established that the pattern of mean zonal winds and temperatures descends at a rate of roughly I scale height over 4 years. This behavior is reminiscent of the equatorial oscillations in Earth's middle atmosphere. Here the zonal-mean spatial structure and descending pattern are driven by the absorption of vertically propagating waves. The maximum excursions in the pattern of easterly and westerly winds is determined by the limits of the zonal phase velocities of the waves. Here we report on the characterization of the waves seen in the temperature profiles retrieved from the Cassini radio-occultation soundings. The equatorial profiles exhibit a complex pattern of wavelike structure with dimensions one pressure scale height and smaller. We combine a spectral decomposition with a WKBJ analysis, where the vertical wavelength is assumed to vary slowly with the ambient static stability and doppler-shifted phase velocity of the wave. Use of the temperature and zonal wind maps from CIRS makes this approach viable. On Earth, the wave forcing associated with the equatorial oscillations generates secondary meridional circulations that affect the mean flow and planetary wave ducting well away from the equator. This may relate to the triggering of the recently reported mid-latitude storms on Saturn.

Field coupling-induced pattern formation in two-layer neuronal network

NASA Astrophysics Data System (ADS)

Qin, Huixin; Wang, Chunni; Cai, Ning; An, Xinlei; Alzahrani, Faris

2018-07-01

The exchange of charged ions across membrane can generate fluctuation of membrane potential and also complex effect of electromagnetic induction. Diversity in excitability of neurons induces different modes selection and dynamical responses to external stimuli. Based on a neuron model with electromagnetic induction, which is described by magnetic flux and memristor, a two-layer network is proposed to discuss the pattern control and wave propagation in the network. In each layer, gap junction coupling is applied to connect the neurons, while field coupling is considered between two layers of the network. The field coupling is approached by using coupling of magnetic flux, which is associated with distribution of electromagnetic field. It is found that appropriate intensity of field coupling can enhance wave propagation from one layer to another one, and beautiful spatial patterns are formed. The developed target wave in the second layer shows some difference from target wave triggered in the first layer of the network when two layers are considered by different excitabilities. The potential mechanism could be pacemaker-like driving from the first layer will be encoded by the second layer.

Complex seismic anisotropy beneath Germany from shear wave splitting and surface wave models

NASA Astrophysics Data System (ADS)

Campbell, L.; Long, M. D.; Becker, T. W.; Lebedev, S.

2013-12-01

Seismic anisotropy beneath stable continental interiors likely reflects a host of processes, including deformation in the lower crust, frozen anisotropy from past deformation processes in the lithospheric mantle, and present-day mantle flow in the asthenosphere. Because the anisotropic structure beneath continental interiors is generally complicated and often exhibits heterogeneity both laterally and with depth, a complete characterization of anisotropy and its interpretation in terms of deformational processes is challenging. In this study, we aim to expand our understanding of continental anisotropy by characterizing in detail the geometry and strength of azimuthal anisotropy beneath Germany and the surrounding region, using a combination of shear wave splitting and surface wave constraints. We utilize data from long-running broadband stations in and around Germany, collected from a variety of national and temporary European networks. We measure the splitting of SKS, SKKS, and PKS phases, with the aim of obtaining the best possible backazimuthal coverage. Preliminary results indicate that anisotropy beneath Germany is generally complex; we observe shear wave splitting patterns that are complicated and are inconsistent with a single horizontal layer of anisotropy beneath the station. Observed delay times are generally small (<1 sec), and there is a preponderance of null *KS arrivals in the dataset, with null measurements detected over a fairly large range of backazimuths. We also observe dramatic differences in splitting patterns over relatively short horizontal distances. Although we note backazimuthal variations in splitting at several stations, we do not observe a clear 90-degree periodicity that one would expect for the case of multiple anisotropic layers. We are currently carrying out comparisons between our observed splitting patterns and those predicted from tomographic models of azimuthal anisotropy derived from surface wave observations. The ultimate goal of this work is to combine different types of observations (shear wave splitting, surface wave models, and eventually anisotropic receiver function analysis) to place precise constraints on the anisotropic structure beneath Germany, and to interpret this structure in terms of on-going and past deformational processes in the crust and mantle.

Influences of Mood Variability, Negative Moods, and Depression on Adolescent Cigarette Smoking

PubMed Central

Weinstein, Sally M.; Mermelstein, Robin J.

2013-01-01

Understanding the emotional risk factors for cigarette smoking in adolescence can greatly inform prevention efforts. The current study examined prospective relationships between three affective dimensions – negative mood variability, overall negative mood, and depression, affect-related smoking motives, and future smoking patterns among adolescents. The current study expands on prior research by using real-time methods to assess mood and by focusing on a key developmental transition in smoking behavior: the progression from experimentation or low level, infrequent use to higher use. Ninth and 10th grade students (N = 461; 55% girls) provided data on cigarette use at a baseline and follow-up 15-month wave, and also provided ecological momentary assessments of negative moods via palmtop computers for one week at each wave. Negative mood was examined via the means of negative mood reports at each wave, and mood variability was examined via the intraindividual standard deviations of negative mood reports at each wave. Depressive symptoms and smoking motives were also assessed. Findings supported a complex self-medication model of smoking escalation in adolescence whereby mood-smoking relationships differed by affect dimension and gender. For girls, greater negative mood variability at baseline significantly predicted rapid escalation in smoking over time, whereas depressive symptoms and overall negative mood were unrelated to girls’ smoking patterns. In contrast, overall negative mood significantly predicted boys’ smoking escalation among those with affect-related motives for smoking. Results thus suggest that inconsistent mood-smoking relations in past work may be driven by the complex interrelationships among affect vulnerabilities, gender, and smoking patterns. PMID:23438244

Intelligent feature selection techniques for pattern classification of Lamb wave signals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hinders, Mark K.; Miller, Corey A.

2014-02-18

Lamb wave interaction with flaws is a complex, three-dimensional phenomenon, which often frustrates signal interpretation schemes based on mode arrival time shifts predicted by dispersion curves. As the flaw severity increases, scattering and mode conversion effects will often dominate the time-domain signals, obscuring available information about flaws because multiple modes may arrive on top of each other. Even for idealized flaw geometries the scattering and mode conversion behavior of Lamb waves is very complex. Here, multi-mode Lamb waves in a metal plate are propagated across a rectangular flat-bottom hole in a sequence of pitch-catch measurements corresponding to the double crossholemore » tomography geometry. The flaw is sequentially deepened, with the Lamb wave measurements repeated at each flaw depth. Lamb wave tomography reconstructions are used to identify which waveforms have interacted with the flaw and thereby carry information about its depth. Multiple features are extracted from each of the Lamb wave signals using wavelets, which are then fed to statistical pattern classification algorithms that identify flaw severity. In order to achieve the highest classification accuracy, an optimal feature space is required but it’s never known a priori which features are going to be best. For structural health monitoring we make use of the fact that physical flaws, such as corrosion, will only increase over time. This allows us to identify feature vectors which are topologically well-behaved by requiring that sequential classes “line up” in feature vector space. An intelligent feature selection routine is illustrated that identifies favorable class distributions in multi-dimensional feature spaces using computational homology theory. Betti numbers and formal classification accuracies are calculated for each feature space subset to establish a correlation between the topology of the class distribution and the corresponding classification accuracy.« less

Optical proximity correction (OPC) in near-field lithography with pixel-based field sectioning time modulation

NASA Astrophysics Data System (ADS)

Oh, Seonghyeon; Han, Dandan; Shim, Hyeon Bo; Hahn, Jae W.

2018-01-01

Subwavelength features have been successfully demonstrated in near-field lithography. In this study, the point spread function (PSF) of a near-field beam spot from a plasmonic ridge nanoaperture is discussed with regard to the complex decaying characteristic of a non-propagating wave and the asymmetry of the field distribution for pattern design. We relaxed the shape complexity of the field distribution with pixel-based optical proximity correction (OPC) for simplifying the pattern image distortion. To enhance the pattern fidelity for a variety of arbitrary patterns, field-sectioning structures are formulated via convolutions with a time-modulation function and a transient PSF along the near-field dominant direction. The sharpness of corners and edges, and line shortening can be improved by modifying the original target pattern shape using the proposed approach by considering both the pattern geometry and directionality of the field decay for OPC in near-field lithography.

Optical proximity correction (OPC) in near-field lithography with pixel-based field sectioning time modulation.

PubMed

Oh, Seonghyeon; Han, Dandan; Shim, Hyeon Bo; Hahn, Jae W

2018-01-26

Subwavelength features have been successfully demonstrated in near-field lithography. In this study, the point spread function (PSF) of a near-field beam spot from a plasmonic ridge nanoaperture is discussed with regard to the complex decaying characteristic of a non-propagating wave and the asymmetry of the field distribution for pattern design. We relaxed the shape complexity of the field distribution with pixel-based optical proximity correction (OPC) for simplifying the pattern image distortion. To enhance the pattern fidelity for a variety of arbitrary patterns, field-sectioning structures are formulated via convolutions with a time-modulation function and a transient PSF along the near-field dominant direction. The sharpness of corners and edges, and line shortening can be improved by modifying the original target pattern shape using the proposed approach by considering both the pattern geometry and directionality of the field decay for OPC in near-field lithography.

Numerical Modeling of Geomorphic Change on Sandy Coasts as a Function of Changing Wave Climate

NASA Astrophysics Data System (ADS)

Adams, P. N.; McNamara, D.; Murray, A. B.; Lovering, J.

2009-12-01

Climate change is expected to affect sandy coast geomorphology through two principal mechanisms: (1) sea level rise, which affects cross-shore sediment transport tending to drive shoreline retreat, and (2) alteration of statistical distributions in ocean storm wave climate (deep water wave height, period, and direction), which affects longshore sediment transport gradients that result in shoreline erosion and accretion. To address potential climate change-driven effects on longshore sediment transport gradients, we are developing techniques to link various numerical models of wave transformation with several different longshore sediment transport formulae in accordance with the Community Surface Dynamics Modeling System (CSDMS) project. Results of the various wave transformation models are compared to field observations of cross-shelf wave transformation along the North Florida Atlantic coast for purposes of model verification and calibration. Initial comparisons between wave-transformation methods (assumption of shore-parallel contours, simple wave ray tracing, and the SWAN spectral wave model) on artificially constructed continental shelves reveal an increasing discrepancy of results for increasing complexity of shelf bathymetry. When the more advanced SWAN spectral wave model is coupled with a simple CERC-type formulation of longshore sediment transport and applied to a real coast with complex offshore shoals (Cape Canaveral region of the North Florida Atlantic Coast), the patterns of erosion and accretion agree with results of the simplest wave-propagation models for some wave conditions, but disagree in others. Model simulations in which wave height and period are held constant show that locations of divergence and convergence of sediment flux shift with deep water wave-approach angle in ways that would not always be predicted using less sophisticated wave propagation models. Thus, predicting long-term local shoreline change on actual coastlines featuring complex bathymetry requires the extra computational effort to run the more advanced model over a wide range of wave conditions.

Interferenceless coded aperture correlation holography-a new technique for recording incoherent digital holograms without two-wave interference.

PubMed

Vijayakumar, A; Rosen, Joseph

2017-06-12

Recording digital holograms without wave interference simplifies the optical systems, increases their power efficiency and avoids complicated aligning procedures. We propose and demonstrate a new technique of digital hologram acquisition without two-wave interference. Incoherent light emitted from an object propagates through a random-like coded phase mask and recorded directly without interference by a digital camera. In the training stage of the system, a point spread hologram (PSH) is first recorded by modulating the light diffracted from a point object by the coded phase masks. At least two different masks should be used to record two different intensity distributions at all possible axial locations. The various recorded patterns at every axial location are superposed in the computer to obtain a complex valued PSH library cataloged to its axial location. Following the training stage, an object is placed within the axial boundaries of the PSH library and the light diffracted from the object is once again modulated by the same phase masks. The intensity patterns are recorded and superposed exactly as the PSH to yield a complex hologram of the object. The object information at any particular plane is reconstructed by a cross-correlation between the complex valued hologram and the appropriate element of the PSH library. The characteristics and the performance of the proposed system were compared with an equivalent regular imaging system.

Characteristics of finite amplitude stationary gravity waves in the atmosphere of Venus

NASA Technical Reports Server (NTRS)

Young, Richard E.; Walterscheid, Richard L.; Schubert, Gerald; Pfister, Leonhard; Houben, Howard; Bindschadler, Duane L.

1994-01-01

This paper extends the study of stationary gravity waves generated near the surface of Venus reported previously by Young et al. to include finite amplitude effects associated with large amplitude waves. Waves are forced near the surface of Venus by periodic forcing. The height-dependent profiles of static stability and mean wind in the Venus atmosphere play a very important role in the evolution of the nonlinear behavior of the waves, just as they do in the linear wave solutions. Certain wave properties are qualitatively consistent with linear wave theory, such as wave trapping, resonance, and wave evanescence for short horizontal wavelenghts. However, the finite amplitude solutions also exhibit many other interesting features. In particular, for forcing amplitudes representative of those that could be expected in mountainous regions such as Aphrodite Terra, waves generated near the surface can reach large amplitudes at and above cloud levels, with clear signatures in the circulation pattern. At still higher levels, the waves can reach large enough amplitude to break, unless damping rates above the clouds are sufficient to limit wave amplitude growth. Well below cloud levels the waves develop complex flow patterns as the result of finite amplitude wave-wave interactions, and waves are generated having considerably shorter horizontal wavelenghts than that associated with the forcing near the surface. Nonlinear interactions can excite waves that are resonant with the background wind and static stability fields even when the primary surface forcing does not, and these waves can dominate the wave spectrum near cloud levels. A global map of Venus topographic slopes derived from Magellan altimetry data shows that slopes of magnitude comparable to or exceeding that used to force the model are ubiquitous over the surface.

Near-field tsunami edge waves and complex earthquake rupture

USGS Publications Warehouse

Geist, Eric L.

2013-01-01

The effect of distributed coseismic slip on progressive, near-field edge waves is examined for continental shelf tsunamis. Detailed observations of edge waves are difficult to separate from the other tsunami phases that are observed on tide gauge records. In this study, analytic methods are used to compute tsunami edge waves distributed over a finite number of modes and for uniformly sloping bathymetry. Coseismic displacements from static elastic theory are introduced as initial conditions in calculating the evolution of progressive edge-waves. Both simple crack representations (constant stress drop) and stochastic slip models (heterogeneous stress drop) are tested on a fault with geometry similar to that of the M w = 8.8 2010 Chile earthquake. Crack-like ruptures that are beneath or that span the shoreline result in similar longshore patterns of maximum edge-wave amplitude. Ruptures located farther offshore result in reduced edge-wave excitation, consistent with previous studies. Introduction of stress-drop heterogeneity by way of stochastic slip models results in significantly more variability in longshore edge-wave patterns compared to crack-like ruptures for the same offshore source position. In some cases, regions of high slip that are spatially distinct will yield sub-events, in terms of tsunami generation. Constructive interference of both non-trapped and trapped waves can yield significantly larger tsunamis than those that produced by simple earthquake characterizations.

Optical vortex knots – one photon at a time

PubMed Central

Tempone-Wiltshire, Sebastien J.; Johnstone, Shaun P.; Helmerson, Kristian

2016-01-01

Feynman described the double slit experiment as “a phenomenon which is impossible, absolutely impossible, to explain in any classical way and which has in it the heart of quantum mechanics”. The double-slit experiment, performed one photon at a time, dramatically demonstrates the particle-wave duality of quantum objects by generating a fringe pattern corresponding to the interference of light (a wave phenomenon) from two slits, even when there is only one photon (a particle) at a time passing through the apparatus. The particle-wave duality of light should also apply to complex three dimensional optical fields formed by multi-path interference, however, this has not been demonstrated. Here we observe particle-wave duality of a three dimensional field by generating a trefoil optical vortex knot – one photon at a time. This result demonstrates a fundamental physical principle, that particle-wave duality implies interference in both space (between spatially distinct modes) and time (through the complex evolution of the superposition of modes), and has implications for topologically entangled single photon states, orbital angular momentum multiplexing and topological quantum computing. PMID:27087642

Membrane-bound MinDE complex acts as a toggle switch that drives Min oscillation coupled to cytoplasmic depletion of MinD.

PubMed

Vecchiarelli, Anthony G; Li, Min; Mizuuchi, Michiyo; Hwang, Ling Chin; Seol, Yeonee; Neuman, Keir C; Mizuuchi, Kiyoshi

2016-03-15

The Escherichia coli Min system self-organizes into a cell-pole to cell-pole oscillator on the membrane to prevent divisions at the cell poles. Reconstituting the Min system on a lipid bilayer has contributed to elucidating the oscillatory mechanism. However, previous in vitro patterns were attained with protein densities on the bilayer far in excess of those in vivo and failed to recapitulate the standing wave oscillations observed in vivo. Here we studied Min protein patterning at limiting MinD concentrations reflecting the in vivo conditions. We identified "burst" patterns--radially expanding and imploding binding zones of MinD, accompanied by a peripheral ring of MinE. Bursts share several features with the in vivo dynamics of the Min system including standing wave oscillations. Our data support a patterning mechanism whereby the MinD-to-MinE ratio on the membrane acts as a toggle switch: recruiting and stabilizing MinD on the membrane when the ratio is high and releasing MinD from the membrane when the ratio is low. Coupling this toggle switch behavior with MinD depletion from the cytoplasm drives a self-organized standing wave oscillator.

Assessment of inflammatory response and sequestration of blood iron transferrin complexes in a rat model of lung injury resulting from exposure to low-frequency shock waves.

PubMed

Gorbunov, Nikolai V; McFaul, Steve J; Van Albert, Stephen; Morrissette, Craig; Zaucha, Gary M; Nath, Jayasree

2004-04-01

Impact of air blast overpressure waves (OPW), or shock wave, with the body wall or body armor produces two types of energy waves: high-frequency low-amplitude stress waves and long-duration low-frequency share waves. These types of energy waves are characterized by different mechanisms of primary tissue injury that mostly affect lung. Systemic inflammation and resultant acute respiratory distress syndrome are known major secondary causative agents of delayed multiple organ failure and subsequent death after OPW exposure. However, association of each pattern of the blast OPW-produced energy waves with postexposure inflammatory events has not yet been delineated. The objectives of the present research were a) establishment of a rat model for assessment of the inflammatory response following lung injury produced by exposure to medium-amplitude (approximately 120 kPa) low-frequency (260+/-5 Hz) OPWs; and b) assessment of the dynamics of alteration in polymorphonuclear leukocyte counts and expression of CD11b adhesion molecules on the surface of polymorphonuclear leukocytes and status of iron-transferrin complexes in peripheral blood after OPW exposure. This study focused on the OPW effects at different time periods, using a sequential approach to postexposure events. Lung injury in rat was induced by OPW generated in a laboratory shock tube. Animals were exposed to OPW (at peak overpressure of 118+/-7 kPa) that produced "moderate" lung injury. Military research institute. Twenty-seven CVF Sprague-Dawley rats were subjected to OPW exposures, and 17 sham-treated animals were used as control. Lung tissue and blood samples were collected at 1, 3, 6, 12, and 24 hrs following OPW exposures and compared with samples collected from nonexposed animals. OPW-induced lung injury caused a 2.7-fold increase in the number of circulatory polymorphonuclear leukocytes as early as 1 hr postexposure, which is indicative of mobilization of the pool of marginated polymorphonuclear leukocytes into the free circulation. Polymorphonuclear leukocyte counts increased through the following 3- and 6-hr periods, when they were, respectively, 5-fold and 3.5-fold higher than in controls. These effects were accompanied by a pronounced expression of CD11b in polymorphonuclear leukocytes and tissue sequestration of blood iron-transferrin complexes during the entire 24-hr period of observations. The increase in circulatory polymorphonuclear leukocytes was accompanied by a decrease in iron-transferrin complex concentrations that apparently reflected implication of blood plasma iron in the inflammatory cell response to OPW-induced injury. The observed dynamics in polymorphonuclear leukocyte alterations in peripheral blood after OPW exposure were similar to those found recently in clinical observations of nonpenetrating injury and in animal models of infectious insults. Therefore, our data suggest that the main pattern of proinflammatory alterations in the rat model of lung injury induced by exposure to long-duration shock wave is similar to patterns that are characteristic of major trauma. The data further suggest that the expression of polymorphonuclear leukocyte CD11b and the response of iron-transferrin complex can be considered as potential surrogate markers in blood for systemic alterations following OPW-induced injury and, therefore, warrant further investigation in a human pilot study.

Structured light generation by magnetic metamaterial half-wave plates at visible wavelength

NASA Astrophysics Data System (ADS)

Zeng, Jinwei; Luk, Ting S.; Gao, Jie; Yang, Xiaodong

2017-12-01

Metamaterial or metasurface unit cells functioning as half-wave plates play an essential role for realizing ideal Pancharatnam-Berry phase optical elements capable of tailoring light phase and polarization as desired. Complex light beam manipulation through these metamaterials or metasurfaces unveils new dimensions of light-matter interactions for many advances in diffraction engineering, beam shaping, structuring light, and holography. However, the realization of metamaterial or metasurface half-wave plates in visible spectrum range is still challenging mainly due to its specific requirements of strong phase anisotropy with amplitude isotropy in subwavelength scale. Here, we propose magnetic metamaterial structures which can simultaneously exploit the electric field and magnetic field of light for achieving the nanoscale half-wave plates at visible wavelength. We design and demonstrate the magnetic metamaterial half-wave plates in linear grating patterns with high polarization conversion purity in a deep subwavelength thickness. Then, we characterize the equivalent magnetic metamaterial half-wave plates in cylindrical coordinate as concentric-ring grating patterns, which act like an azimuthal half-wave plate and accordingly exhibit spatially inhomogeneous polarization and phase manipulations including spin-to-orbital angular momentum conversion and vector beam generation. Our results show potentials for realizing on-chip beam converters, compact holograms, and many other metamaterial devices for structured light beam generation, polarization control, and wavefront manipulation.

Self-Organized Lattices of Nonlinear Optochemical Waves in Photopolymerizable Fluids: The Spontaneous Emergence of 3-D Order in a Weakly Correlated System.

PubMed

Ponte, Matthew R; Hudson, Alexander D; Saravanamuttu, Kalaichelvi

2018-03-01

Many of the extraordinary three-dimensional architectures that pattern our physical world emerge from complex nonlinear systems or dynamic populations whose individual constituents are only weakly correlated to each other. Shoals of fish, murmuration behaviors in birds, congestion patterns in traffic, and even networks of social conventions are examples of spontaneous pattern formation, which cannot be predicted from the properties of individual elements alone. Pattern formation at a different scale has been observed or predicted in weakly correlated systems including superconductors, atomic gases near Bose Einstein condensation, and incoherent optical fields. Understanding pattern formation in nonlinear weakly correlated systems, which are often unified through mathematical expression, could pave intelligent self-organizing pathways to functional materials, architectures, and computing technologies. However, it is experimentally difficult to directly visualize the nonlinear dynamics of pattern formation in most populations-especially in three dimensions. Here, we describe the collective behavior of large populations of nonlinear optochemical waves, which are poorly correlated in both space and time. The optochemical waves-microscopic filaments of white light entrapped within polymer channels-originate from the modulation instability of incandescent light traveling in photopolymerizable fluids. By tracing the three-dimensional distribution of optical intensity in the nascent polymerizing system, we find that populations of randomly distributed, optochemical waves synergistically and collectively shift in space to form highly ordered lattices of specific symmetries. These, to our knowledge, are the first three-dimensionally periodic structures to emerge from a system of weakly correlated waves. Their spontaneous formation in an incoherent and effectively chaotic field is counterintuitive, but the apparent contradiction of known behaviors of light including the laws of optical interference can be explained through the soliton-like interactions of optochemical waves with nearest neighbors. Critically, this work casts fundamentally new insight into the collective behaviors of poorly correlated nonlinear waves in higher dimensions and provides a rare, accessible platform for further experimental studies of these previously unexplored behaviors. Furthermore, it defines a self-organization paradigm that, unlike conventional counterparts, could generate polymer microstructures with symmetries spanning all the Bravais lattices.

Propagating waves can explain irregular neural dynamics.

PubMed

Keane, Adam; Gong, Pulin

2015-01-28

Cortical neurons in vivo fire quite irregularly. Previous studies about the origin of such irregular neural dynamics have given rise to two major models: a balanced excitation and inhibition model, and a model of highly synchronized synaptic inputs. To elucidate the network mechanisms underlying synchronized synaptic inputs and account for irregular neural dynamics, we investigate a spatially extended, conductance-based spiking neural network model. We show that propagating wave patterns with complex dynamics emerge from the network model. These waves sweep past neurons, to which they provide highly synchronized synaptic inputs. On the other hand, these patterns only emerge from the network with balanced excitation and inhibition; our model therefore reconciles the two major models of irregular neural dynamics. We further demonstrate that the collective dynamics of propagating wave patterns provides a mechanistic explanation for a range of irregular neural dynamics, including the variability of spike timing, slow firing rate fluctuations, and correlated membrane potential fluctuations. In addition, in our model, the distributions of synaptic conductance and membrane potential are non-Gaussian, consistent with recent experimental data obtained using whole-cell recordings. Our work therefore relates the propagating waves that have been widely observed in the brain to irregular neural dynamics. These results demonstrate that neural firing activity, although appearing highly disordered at the single-neuron level, can form dynamical coherent structures, such as propagating waves at the population level. Copyright © 2015 the authors 0270-6474/15/351591-15$15.00/0.

Electrocardiography based prediction of hypertrophy pattern and fibrosis amount in hypertrophic cardiomyopathy: comparative study with cardiac magnetic resonance imaging.

PubMed

Park, Chul Hwan; Chung, Hyemoon; Kim, Yoonjung; Kim, Jong-Youn; Min, Pil-Ki; Lee, Kyung-A; Yoon, Young Won; Kim, Tae Hoon; Lee, Byoung Kwon; Hong, Bum-Kee; Rim, Se-Joong; Kwon, Hyuck Moon; Choi, Eui-Young

2018-05-04

Although, cardiac magnetic resonance imaging (CMR) is a gold standard for risk stratification of hypertrophic cardiomyopathy (HCM), is limited in some situations. We sought to evaluate the predictive power of quantitative electrocardiography in assessing hypertrophy pattern and fibrosis in HCM. Eighty-eight patients with HCM were studied. Voltage of R-S-T waves, number of fragmented QRS (fQRS) complexes, and T wave morphology were measured by 12-lead electrocardiography. Sixteen segmental thickness, late gadolinium enhancement (LGE), native T1, extracellular volume fraction (ECV), and T2, left ventricular (LV) mass and %LGE were measured by CMR. Patterns of LV hypertrophy were classified as pure apical, mixed, or asymmetrical septal hypertrophy. Positive and negative predictive values of biphasic T wave for pure apical type were 70.4 and 63.9%, and the predictive values of precordial negative T wave sums [Formula: see text] 12.5 mm were 69.2 and 79.6%. Precordial S waves, especially Cornell voltage index, were significantly correlated to LV mass index and maximal thickness (p [Formula: see text]0.001). The number of fQRS leads was significantly correlated to %LGE, average ECV, and T2 (all p [Formula: see text]0.001). More than one lead with fQRS could predict [Formula: see text]5% of LGE mass with 58% sensitivity and 63% specificity (p = 0.049, area under the curve = 0.627). However, degree of correlation between maximal thickness and precordial S was poor in cases with fQRS more two leads. T wave morphology and precordial S helps discriminate hypertrophy pattern and maximal hypertrophy, however, in cases with more than two leads of concomitant fQRS, CMR defines fibrosis amount and hypertrophy more accurately.

Invertible propagator for plane wave illumination of forward-scattering structures.

PubMed

Samelsohn, Gregory

2017-05-10

Propagation of directed waves in forward-scattering media is considered. It is assumed that the evolution of the wave field is governed by the standard parabolic wave equation. An efficient one-step momentum-space propagator, suitable for a tilted plane wave illumination of extended objects, is derived. It is expressed in terms of a propagation operator that transforms (the complex exponential of) a linogram of the illuminated object into a set of its diffraction patterns. The invertibility of the propagator is demonstrated, which permits a multiple-shot scatter correction to be performed, and makes the solution especially attractive for either projective or tomographic imaging. As an example, high-resolution tomograms are obtained in numerical simulations implemented for a synthetic phantom, with both refractive and absorptive inclusions.

Ionic wave propagation and collision in an excitable circuit model of microtubules

NASA Astrophysics Data System (ADS)

Guemkam Ghomsi, P.; Tameh Berinyoh, J. T.; Moukam Kakmeni, F. M.

2018-02-01

In this paper, we report the propensity to excitability of the internal structure of cellular microtubules, modelled as a relatively large one-dimensional spatial array of electrical units with nonlinear resistive features. We propose a model mimicking the dynamics of a large set of such intracellular dynamical entities as an excitable medium. We show that the behavior of such lattices can be described by a complex Ginzburg-Landau equation, which admits several wave solutions, including the plane waves paradigm. A stability analysis of the plane waves solutions of our dynamical system is conducted both analytically and numerically. It is observed that perturbed plane waves will always evolve toward promoting the generation of localized periodic waves trains. These modes include both stationary and travelling spatial excitations. They encompass, on one hand, localized structures such as solitary waves embracing bright solitons, dark solitons, and bisolitonic impulses with head-on collisions phenomena, and on the other hand, the appearance of both spatially homogeneous and spatially inhomogeneous stationary patterns. This ability exhibited by our array of proteinic elements to display several states of excitability exposes their stunning biological and physical complexity and is of high relevance in the description of the developmental and informative processes occurring on the subcellular scale.

Ionic wave propagation and collision in an excitable circuit model of microtubules.

PubMed

Guemkam Ghomsi, P; Tameh Berinyoh, J T; Moukam Kakmeni, F M

2018-02-01

In this paper, we report the propensity to excitability of the internal structure of cellular microtubules, modelled as a relatively large one-dimensional spatial array of electrical units with nonlinear resistive features. We propose a model mimicking the dynamics of a large set of such intracellular dynamical entities as an excitable medium. We show that the behavior of such lattices can be described by a complex Ginzburg-Landau equation, which admits several wave solutions, including the plane waves paradigm. A stability analysis of the plane waves solutions of our dynamical system is conducted both analytically and numerically. It is observed that perturbed plane waves will always evolve toward promoting the generation of localized periodic waves trains. These modes include both stationary and travelling spatial excitations. They encompass, on one hand, localized structures such as solitary waves embracing bright solitons, dark solitons, and bisolitonic impulses with head-on collisions phenomena, and on the other hand, the appearance of both spatially homogeneous and spatially inhomogeneous stationary patterns. This ability exhibited by our array of proteinic elements to display several states of excitability exposes their stunning biological and physical complexity and is of high relevance in the description of the developmental and informative processes occurring on the subcellular scale.

Cadmium stress assessment based on the electrocardiogram characteristics of zebra fish (Danio rerio): QRS complex could play an important role.

PubMed

Xing, Na; Ji, Lizhen; Song, Jie; Ma, Jingchun; Li, Shangge; Ren, Zongming; Xu, Fei; Zhu, Jianping

2017-10-01

The electrocardiogram (ECG) of zebra fish (Danio rerio) expresses cardiac features that are similar to humans. Here we use sharp microelectrode measurements to obtain ECG characteristics in adult zebra fish and analyze the effects of cadmium chloride (CdCl 2 ) on the heart. We observe the overall changes of ECG parameters in different treatments (0.1 TU, 0.5 TU and 1.0 TU CdCl 2 ), including P wave, Q wave, R wave, S wave, T wave, PR interval (atrial contraction), QRS complex (ventricular depolarization), ST segment, and QT interval (ventricular repolarization). The trends of the ECG parameters showed some responses to the concentration and exposure time of CdCl 2 , but it was difficult to obtain more information about the useful indicators in water quality assessment depending on tendency analysis alone. A self-organizing map (SOM) showed that P values, R values, and T values were similar; R wave and T wave amplitude were similar; and most important, QRS value was similar to the CdCl 2 stress according to the classified data patterns including CdCl 2 stress (E) and ECG components based on the Ward linkage. It suggested that the duration of QRS complex was related to environmental stress E directly. The specification and evaluation of ECG parameters in Cd 2+ pollution suggested that there is a markedly significant correlation between QRS complex and CdCl 2 stress with the highest r (0.729) and the smallest p (0.002) among all ECG characteristics. In this case, it is concluded that QRS complex can be used as an indicator in the CdCl 2 stress assessment due to the lowest AIC data abased on the linear regression model between the CdCl 2 stress and ECG parameters. Copyright © 2017 Elsevier B.V. All rights reserved.

Modeling Events in the Lower Imperial Valley Basin

NASA Astrophysics Data System (ADS)

Tian, X.; Wei, S.; Zhan, Z.; Fielding, E. J.; Helmberger, D. V.

2010-12-01

The Imperial Valley below the US-Mexican border has few seismic stations but many significant earthquakes. Many of these events, such as the recent El Mayor-Cucapah event, have complex mechanisms involving a mixture of strike-slip and normal slip patterns with now over 30 aftershocks with magnitude over 4.5. Unfortunately, many earthquake records from the Southern Imperial Valley display a great deal of complexity, ie., strong Rayleigh wave multipathing and extended codas. In short, regional recordings in the US are too complex to easily separate source properties from complex propagation. Fortunately, the Dec 30 foreshock (Mw=5.9) has excellent recordings teleseismically and regionally, and moreover is observed with InSAR. We use this simple strike-slip event to calibrate paths. In particular, we are finding record segments involving Pnl (including depth phases) and some surface waves (mostly Love waves) that appear well behaved, ie., can be approximated by synthetics from 1D local models and events modeled with the Cut-and-Paste (CAP) routine. Simple events can then be identified along with path calibration. Modeling the more complicated paths can be started with known mechanisms. We will report on both the aftershocks and historic events.

Interferometric imaging of nonlocal electromechanical power transduction in ferroelectric domains.

PubMed

Zheng, Lu; Dong, Hui; Wu, Xiaoyu; Huang, Yen-Lin; Wang, Wenbo; Wu, Weida; Wang, Zheng; Lai, Keji

2018-05-22

The electrical generation and detection of elastic waves are the foundation for acoustoelectronic and acoustooptic systems. For surface acoustic wave devices, microelectromechanical/nanoelectromechanical systems, and phononic crystals, tailoring the spatial variation of material properties such as piezoelectric and elastic tensors may bring significant improvements to the system performance. Due to the much slower speed of sound than speed of light in solids, it is desirable to study various electroacoustic behaviors at the mesoscopic length scale. In this work, we demonstrate the interferometric imaging of electromechanical power transduction in ferroelectric lithium niobate domain structures by microwave impedance microscopy. In sharp contrast to the traditional standing-wave patterns caused by the superposition of counterpropagating waves, the constructive and destructive fringes in microwave dissipation images exhibit an intriguing one-wavelength periodicity. We show that such unusual interference patterns, which are fundamentally different from the acoustic displacement fields, stem from the nonlocal interaction between electric fields and elastic waves. The results are corroborated by numerical simulations taking into account the sign reversal of piezoelectric tensor in oppositely polarized domains. Our work paves ways to probe nanoscale electroacoustic phenomena in complex structures by near-field electromagnetic imaging.

Complex activity patterns in arterial wall: results from a model of calcium dynamics.

PubMed

Buchner, Teodor; Pietkun, Jakub; Kuklik, Paweł

2012-03-01

Using a dynamical model of smooth muscle cells in an arterial wall, defined as a system of coupled five-dimensional nonlinear oscillators, on a grid with cylindrical symmetry, we compare the admissible activity patterns with those known from the heart tissue. We postulate on numerical basis the possibility to induce a stable spiral wave in the arterial wall. Such a spiral wave can inhibit the propagation of the axial calcium wave and effectively stop the vasomotion. We also discuss the dynamics of the circumferential calcium wave in comparison to rotors in venous ostia that are a common source of supraventricular ectopy. We show that the velocity and in consequence the frequency range of the circumferential calcium wave is by orders of magnitude too small compared to that of the rotors. The mechanism of the rotor is not likely to involve the calcium-related dynamics of the smooth muscle cells. The calcium-related dynamics which is voltage-independent and hard to be reset seems to actually protect the blood vessels against the electric activity of the atria. We also discuss the microreentry phenomenon, which was found in numerical experiments in the studied model.

Ablation of multi-wavelet re-entry: general principles and in silico analyses.

PubMed

Spector, Peter S; Correa de Sa, Daniel D; Tischler, Ethan S; Thompson, Nathaniel C; Habel, Nicole; Stinnett-Donnelly, Justin; Benson, Bryce E; Bielau, Philipp; Bates, Jason H T

2012-11-01

Catheter ablation strategies for treatment of cardiac arrhythmias are quite successful when targeting spatially constrained substrates. Complex, dynamic, and spatially varying substrates, however, pose a significant challenge for ablation, which delivers spatially fixed lesions. We describe tissue excitation using concepts of surface topology which provides a framework for addressing this challenge. The aim of this study was to test the efficacy of mechanism-based ablation strategies in the setting of complex dynamic substrates. We used a computational model of propagation through electrically excitable tissue to test the effects of ablation on excitation patterns of progressively greater complexity, from fixed rotors to multi-wavelet re-entry. Our results indicate that (i) focal ablation at a spiral-wave core does not result in termination; (ii) termination requires linear lesions from the tissue edge to the spiral-wave core; (iii) meandering spiral-waves terminate upon collision with a boundary (linear lesion or tissue edge); (iv) the probability of terminating multi-wavelet re-entry is proportional to the ratio of total boundary length to tissue area; (v) the efficacy of linear lesions varies directly with the regional density of spiral-waves. We establish a theoretical framework for re-entrant arrhythmias that explains the requirements for their successful treatment. We demonstrate the inadequacy of focal ablation for spatially fixed spiral-waves. Mechanistically guided principles for ablating multi-wavelet re-entry are provided. The potential to capitalize upon regional heterogeneity of spiral-wave density for improved ablation efficacy is described.

Slow Feature Analysis on Retinal Waves Leads to V1 Complex Cells

PubMed Central

Dähne, Sven; Wilbert, Niko; Wiskott, Laurenz

2014-01-01

The developing visual system of many mammalian species is partially structured and organized even before the onset of vision. Spontaneous neural activity, which spreads in waves across the retina, has been suggested to play a major role in these prenatal structuring processes. Recently, it has been shown that when employing an efficient coding strategy, such as sparse coding, these retinal activity patterns lead to basis functions that resemble optimal stimuli of simple cells in primary visual cortex (V1). Here we present the results of applying a coding strategy that optimizes for temporal slowness, namely Slow Feature Analysis (SFA), to a biologically plausible model of retinal waves. Previously, SFA has been successfully applied to model parts of the visual system, most notably in reproducing a rich set of complex-cell features by training SFA with quasi-natural image sequences. In the present work, we obtain SFA units that share a number of properties with cortical complex-cells by training on simulated retinal waves. The emergence of two distinct properties of the SFA units (phase invariance and orientation tuning) is thoroughly investigated via control experiments and mathematical analysis of the input-output functions found by SFA. The results support the idea that retinal waves share relevant temporal and spatial properties with natural visual input. Hence, retinal waves seem suitable training stimuli to learn invariances and thereby shape the developing early visual system such that it is best prepared for coding input from the natural world. PMID:24810948

Propagating wave and irregular dynamics: Spatiotemporal patterns of cholinergic theta oscillations in neocortex, in vitro

PubMed Central

Bao, Weili; Wu, Jian-young

2010-01-01

Neocortical “theta” oscillation (5- 12 Hz) has been observed in animals and human subjects but little is known about how the oscillation is organized in the cortical intrinsic networks. Here we use voltage-sensitive dye and optical imaging to study a carbachol/bicuculline induced theta (~8 Hz) oscillation in rat neocortical slices. The imaging has large signal-to-noise ratio, allowing us to map the phase distribution over the neocortical tissue during the oscillation. The oscillation was organized as spontaneous epochs and each epoch was composed of a “first spike”, a “regular” period (with relatively stable frequency and amplitude) and an “irregular” period (with variable frequency and amplitude) of oscillations. During each cycle of the regular oscillation one wave of activation propagated horizontally (parallel to the cortical lamina) across the cortical section at a velocity of ~50 mm/sec. Vertically the activity was synchronized through all cortical layers. This pattern of one propagating wave associated with one oscillation cycle was seen during all the regular cycles. The oscillation frequency varied noticeably at two neighboring horizontal locations (330 μm apart), suggesting that the oscillation is locally organized and each local oscillator is about equal or less than 300 μm wide horizontally. During irregular oscillations the spatiotemporal patterns were complex and sometimes the vertical synchronization decomposed, suggesting a de-coupling among local oscillators. Our data suggested that neocortical theta oscillation is sustained by multiple local oscillators. The coupling regime among the oscillators may determine the spatiotemporal pattern and switching between propagating waves and irregular patterns. PMID:12612003

Scanning wave photopolymerization enables dye-free alignment patterning of liquid crystals

PubMed Central

Hisano, Kyohei; Aizawa, Miho; Ishizu, Masaki; Kurata, Yosuke; Nakano, Wataru; Akamatsu, Norihisa; Barrett, Christopher J.; Shishido, Atsushi

2017-01-01

Hierarchical control of two-dimensional (2D) molecular alignment patterns over large areas is essential for designing high-functional organic materials and devices. However, even by the most powerful current methods, dye molecules that discolor and destabilize the materials need to be doped in, complicating the process. We present a dye-free alignment patterning technique, based on a scanning wave photopolymerization (SWaP) concept, that achieves a spatial light–triggered mass flow to direct molecular order using scanning light to propagate the wavefront. This enables one to generate macroscopic, arbitrary 2D alignment patterns in a wide variety of optically transparent polymer films from various polymerizable mesogens with sufficiently high birefringence (>0.1) merely by single-step photopolymerization, without alignment layers or polarized light sources. A set of 150,000 arrays of a radial alignment pattern with a size of 27.4 μm × 27.4 μm were successfully inscribed by SWaP, in which each individual pattern is smaller by a factor of 104 than that achievable by conventional photoalignment methods. This dye-free inscription of microscopic, complex alignment patterns over large areas provides a new pathway for designing higher-performance optical and mechanical devices. PMID:29152567

Studies in nonlinear problems of energy. Progress report, October 1, 1993--September 30, 1994

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matkowsky, B.J.

1994-09-01

The authors concentrate on modeling, analysis and large scale scientific computation of combustion and flame propagation phenomena, with emphasis on the transition from laminar to turbulent combustion. In the transition process a flame passed through a stages exhibiting increasingly complex spatial and temporal patterns which serve as signatures identifying each stage. Often the transitions arise via bifurcation. The authors investigate nonlinear dynamics, bifurcation and pattern formation in the successive stage of transition. They describe the stability of combustion waves, and transitions to combustion waves exhibiting progressively higher degrees of spatio-temporal complexity. One aspect of this research program is the systematicmore » derivation of appropriate, approximate models from the original models governing combustion. The approximate models are then analyzed. The authors are particularly interested in understanding the basic mechanisms affecting combustion, which is a prerequisite to effective control of the process. They are interested in determining the effects of varying various control parameters, such as Nusselt number, Lewis number, heat release, activation energy, Damkohler number, Reynolds number, Prandtl number, Peclet number, etc. The authors have also considered a number of problems in self-propagating high-temperature synthesis (SHS), in which combustion waves are employed to synthesize advanced materials. Efforts are directed toward understanding fundamental mechanisms. 167 refs.« less

Spatiotemporal chaos and two-dimensional dissipative rogue waves in Lugiato-Lefever model

NASA Astrophysics Data System (ADS)

Panajotov, Krassimir; Clerc, Marcel G.; Tlidi, Mustapha

2017-06-01

Driven nonlinear optical cavities can exhibit complex spatiotemporal dynamics. We consider the paradigmatic Lugiato-Lefever model describing driven nonlinear optical resonator. This model is one of the most-studied nonlinear equations in optics. It describes a large spectrum of nonlinear phenomena from bistability, to periodic patterns, localized structures, self-pulsating localized structures and to a complex spatiotemporal behavior. The model is considered also as prototype model to describe several optical nonlinear devices such as Kerr media, liquid crystals, left handed materials, nonlinear fiber cavity, and frequency comb generation. We focus our analysis on a spatiotemporal chaotic dynamics in one-dimension. We identify a route to spatiotemporal chaos through an extended quasiperiodicity. We have estimated the Kaplan-Yorke dimension that provides a measure of the strange attractor complexity. Likewise, we show that the Lugiato-Leferver equation supports rogues waves in two-dimensional settings. We characterize rogue-wave formation by computing the probability distribution of the pulse height. Contribution to the Topical Issue "Theory and Applications of the Lugiato-Lefever Equation", edited by Yanne K. Chembo, Damia Gomila, Mustapha Tlidi, Curtis R. Menyuk.

Nonlinear ion-acoustic cnoidal waves in a dense relativistic degenerate magnetoplasma.

PubMed

El-Shamy, E F

2015-03-01

The complex pattern and propagation characteristics of nonlinear periodic ion-acoustic waves, namely, ion-acoustic cnoidal waves, in a dense relativistic degenerate magnetoplasma consisting of relativistic degenerate electrons and nondegenerate cold ions are investigated. By means of the reductive perturbation method and appropriate boundary conditions for nonlinear periodic waves, a nonlinear modified Korteweg-de Vries (KdV) equation is derived and its cnoidal wave is analyzed. The various solutions of nonlinear ion-acoustic cnoidal and solitary waves are presented numerically with the Sagdeev potential approach. The analytical solution and numerical simulation of nonlinear ion-acoustic cnoidal waves of the nonlinear modified KdV equation are studied. Clearly, it is found that the features (amplitude and width) of nonlinear ion-acoustic cnoidal waves are proportional to plasma number density, ion cyclotron frequency, and direction cosines. The numerical results are applied to high density astrophysical situations, such as in superdense white dwarfs. This research will be helpful in understanding the properties of compact astrophysical objects containing cold ions with relativistic degenerate electrons.

Holographic metasurface systems for beam-forming and imaging (Conference Presentation)

NASA Astrophysics Data System (ADS)

Smith, David R.

2016-09-01

Metamaterials offer an alternative perspective for the design of new materials and devices. The advantage of the metamaterial description is that certain device solutions can more easily be recognized. Here, we discuss broadly the impact of the metamaterial design philosophy on quasi-optical apertures based on patterned holographic metasurfaces. In a guided wave format, in which radiating complementary metamaterial irises are patterned on the upper plate of a microstrip or parallel plate waveguide, the reference wave is equivalent to the guided wave and the entire structure becomes a compact, efficient holographic, aperture antenna. We have developed a millimeter-wave imaging system that makes use of a set of complementary metamaterial waveguide panels to form a frequency-diverse aperture. In this context, the metamaterial aperture produces a complex radiation pattern that varies spatially as a function of the driving frequency; a frequency sweep over a selected bandwidth thus illuminates a region of space with a set of distinct radiation patterns. Collecting the returned signal reflected by illuminated objects within the scene, a set of measurements can be made from which an image of the scene can be reconstructed. This imaging application provides a useful example of the introduction, integration and optimization of a metamaterial aperture into a complete system, where all other aspects of the system—including algorithms, calibration, software and electronics—must be tailored for the particulars of the metamaterial component. As metamaterials transition from science to technology, these aspects may prove just as challenging and interesting as the underlying metamaterial components.

Observations of storm morphodynamics using Coastal Lidar and Radar Imaging System (CLARIS): Importance of wave refraction and dissipation over complex surf-zone morphology at a shoreline erosional hotspot

NASA Astrophysics Data System (ADS)

Brodie, Katherine L.

Elevated water levels and large waves during storms cause beach erosion, overwash, and coastal flooding, particularly along barrier island coastlines. While predictions of storm tracks have greatly improved over the last decade, predictions of maximum water levels and variations in the extent of damage along a coastline need improvement. In particular, physics based models still cannot explain why some regions along a relatively straight coastline may experience significant erosion and overwash during a storm, while nearby locations remain seemingly unchanged. Correct predictions of both the timing of erosion and variations in the magnitude of erosion along the coast will be useful to both emergency managers and homeowners preparing for an approaching storm. Unfortunately, research on the impact of a storm to the beach has mainly been derived from "pre" and "post" storm surveys of beach topography and nearshore bathymetry during calm conditions. This has created a lack of data during storms from which to ground-truth model predictions and test hypotheses that explain variations in erosion along a coastline. We have developed Coastal Lidar and Radar Imaging System (CLARIS), a mobile system that combines a terrestrial scanning laser and an X-band marine radar system using precise motion and location information. CLARIS can operate during storms, measuring beach topography, nearshore bathymetry (from radar-derived wave speed measurements), surf-zone wave parameters, and maximum water levels remotely. In this dissertation, we present details on the development, design, and testing of CLARIS and then use CLARIS to observe a 10 km section of coastline in Kitty Hawk and Kill Devil Hills on the Outer Banks of North Carolina every 12 hours during a Nor'Easter (peak wave height in 8 m of water depth = 3.4 m). High decadal rates of shoreline change as well as heightened erosion during storms have previously been documented to occur within the field site. In addition, complex bathymetric features that traverse the surf-zone into the nearshore are present along the southern six kilometers of the field site. In addition to the CLARIS observations, we model wave propagation over the complex nearshore bathymetry for the same storm event. Data reveal that the complex nearshore bathymetry is mirrored by kilometer scale undulations in the shoreline, and that both morphologies persist during storms, contrary to common observations of shoreline and surf-zone linearization by large storm waves. We hypothesize that wave refraction over the complex nearshore bathymetry forces flow patterns which may enhance or stabilize the shoreline and surf-zone morphology during storms. In addition, our semi-daily surveys of the beach indicate that spatial and temporal patterns of erosion are strongly correlated to the steepness of the waves. Along more than half the study site, fifty percent or more of the erosion that occurred during the first 12 hours of the storm was recovered within 24 hours of the peak of the storm as waves remained large (>2.5 m), but transitioned to long period swell. In addition, spatial variations in the amount of beach volume change during the building portion of the storm were strongly correlated with observed wave dissipation within the inner surf zone, as opposed to predicted inundation elevations or alongshore variations in wave height.

Mechanochemical pattern formation in simple models of active viscoelastic fluids and solids

NASA Astrophysics Data System (ADS)

Alonso, Sergio; Radszuweit, Markus; Engel, Harald; Bär, Markus

2017-11-01

The cytoskeleton of the organism Physarum polycephalum is a prominent example of a complex active viscoelastic material wherein stresses induce flows along the organism as a result of the action of molecular motors and their regulation by calcium ions. Experiments in Physarum polycephalum have revealed a rich variety of mechanochemical patterns including standing, traveling and rotating waves that arise from instabilities of spatially homogeneous states without gradients in stresses and resulting flows. Herein, we investigate simple models where an active stress induced by molecular motors is coupled to a model describing the passive viscoelastic properties of the cellular material. Specifically, two models for viscoelastic fluids (Maxwell and Jeffrey model) and two models for viscoelastic solids (Kelvin-Voigt and Standard model) are investigated. Our focus is on the analysis of the conditions that cause destabilization of spatially homogeneous states and the related onset of mechano-chemical waves and patterns. We carry out linear stability analyses and numerical simulations in one spatial dimension for different models. In general, sufficiently strong activity leads to waves and patterns. The primary instability is stationary for all active fluids considered, whereas all active solids have an oscillatory primary instability. All instabilities found are of long-wavelength nature reflecting the conservation of the total calcium concentration in the models studied.

Ca2+ signalling and early embryonic patterning during zebrafish development.

PubMed

Webb, Sarah E; Miller, Andrew L

2007-09-01

1. It has been proposed that Ca2+ signalling, in the form of pulses, waves and steady gradients, may play a crucial role in key pattern-forming events during early vertebrate development. 2. With reference to the embryo of the zebrafish (Danio rerio), herein we review the Ca2+ transients reported from the cleavage to segmentation periods. This time-window includes most of the major pattern-forming events of early development, which transform a single-cell zygote into a complex multicellular embryo with established primary germ layers and body axes. 3. Data are presented to support our proposal that intracellular Ca2+ waves are an essential feature of embryonic cytokinesis and that propagating intercellular Ca2+ waves (both long and short range) may play a crucial role in: (i) the establishment of the embryonic periderm and the coordination of cell movements during epiboly, convergence and extension; (ii) the establishment of the basic embryonic axes and germ layers; and (iii) definition of the morphological boundaries of specific tissue domains and embryonic structures, including future organ anlagen. 4. The potential downstream targets of these Ca2+ transients are also discussed, as well as how they may integrate with other pattern-forming signalling pathways known to modulate early developmental events.

Local heterogeneities in cardiac systems suppress turbulence by generating multi-armed rotors

NASA Astrophysics Data System (ADS)

Zhang, Zhihui; Steinbock, Oliver

2016-05-01

Ventricular fibrillation is an extremely dangerous cardiac arrhythmia that is linked to rotating waves of electric activity and chaotically moving vortex lines. These filaments can pin to insulating, cylindrical heterogeneities which swiftly become the new rotation backbone of the local wave field. For thin cylinders, the stabilized rotation is sufficiently fast to repel the free segments of the turbulent filament tangle and annihilate them at the system boundaries. The resulting global wave pattern is periodic and highly ordered. Our cardiac simulations show that also thicker cylinders can establish analogous forms of tachycardia. This process occurs through the spontaneous formation of pinned multi-armed vortices. The observed number of wave arms N depends on the cylinder radius and is associated to stability windows that for N = 2, 3 partially overlap. For N = 1, 2, we find a small gap in which the turbulence is removed but the pinned rotor shows complex temporal dynamics. The relevance of our findings to human cardiology are discussed in the context of vortex pinning to more complex-shaped anatomical features and remodeled myocardium.

Frequency clusters in self-excited dust density waves

NASA Astrophysics Data System (ADS)

Menzel, Kristoffer O.; Arp, Oliver; Piel, Alexander

2010-11-01

Self-excited dust density waves were studied under microgravity conditions. Their non-sinusoidal shape and high degrees of modulation suggests that nonlinear effects play an important role in their spatio-temporal dynamics. The resulting complex wave pattern is analyzed in great detail by means of the Hilbert transform, which provides instantaneous wave attributes, such as the phase and the frequency. Our analysis showed that the spatial frequency distribution of the DDWs is usually not constant over the dust cloud. In contrast, the wave field is divided into regions of different but almost constant frequencies [1]. The boundaries of these so-called frequency clusters coincide with the locations of phase defects in the wave field. It is found that the size of the clusters depends on the strength of spatial gradients in the plasma parameters. We attribute the formation of frequency clusters to synchronization phenomena as a consequence of the nonlinear character of the wave.[1] K. O. Menzel, O. Arp, A.Piel, Phys. Rev. Lett. 104, 235002 (2010)

Postictal psychosis and its electrophysiological correlates in invasive EEG: a case report study and literature review.

PubMed

Kuba, Robert; Brázdil, Milan; Rektor, Ivan

2012-04-01

We identified two patients with medically refractory temporal lobe epilepsy, from whom intracranial EEG recordings were obtained at the time of postictal psychosis. Both patients had mesial temporal epilepsy associated with hippocampal sclerosis. In both patients, the postictal psychosis was associated with a continual "epileptiform" EEG pattern that differed from their interictal and ictal EEG findings (rhythmical slow wave and "abortive" spike-slow wave complex activity in the right hippocampus and lateral temporal cortex in case 1 and a periodic pattern of triphasic waves in the contacts recording activity from the left anterior cingulate gyrus). Some cases of postictal psychosis might be caused by the transient impairment of several limbic system structures due to the "continual epileptiform discharge" in some brain regions. Case 2 is the first report of a patient with TLE in whom psychotic symptoms were associated with the epileptiform impairment of the anterior cingulate gyrus. Copyright © 2012 Elsevier Inc. All rights reserved.

Membrane-bound MinDE complex acts as a toggle switch that drives Min oscillation coupled to cytoplasmic depletion of MinD

PubMed Central

Vecchiarelli, Anthony G.; Li, Min; Mizuuchi, Michiyo; Hwang, Ling Chin; Seol, Yeonee; Neuman, Keir C.; Mizuuchi, Kiyoshi

2016-01-01

The Escherichia coli Min system self-organizes into a cell-pole to cell-pole oscillator on the membrane to prevent divisions at the cell poles. Reconstituting the Min system on a lipid bilayer has contributed to elucidating the oscillatory mechanism. However, previous in vitro patterns were attained with protein densities on the bilayer far in excess of those in vivo and failed to recapitulate the standing wave oscillations observed in vivo. Here we studied Min protein patterning at limiting MinD concentrations reflecting the in vivo conditions. We identified “burst” patterns—radially expanding and imploding binding zones of MinD, accompanied by a peripheral ring of MinE. Bursts share several features with the in vivo dynamics of the Min system including standing wave oscillations. Our data support a patterning mechanism whereby the MinD-to-MinE ratio on the membrane acts as a toggle switch: recruiting and stabilizing MinD on the membrane when the ratio is high and releasing MinD from the membrane when the ratio is low. Coupling this toggle switch behavior with MinD depletion from the cytoplasm drives a self-organized standing wave oscillator. PMID:26884160

Scattering images from autocorrelation functions of P-wave seismic velocity images: the case of Tenerife Island (Canary Islands, Spain)

NASA Astrophysics Data System (ADS)

García-Yeguas, A.; Sánchez-Alzola, A.; De Siena, L.; Prudencio, J.; Díaz-Moreno, A.; Ibáñez, J. M.

2018-03-01

We present a P-wave scattering image of the volcanic structures under Tenerife Island using the autocorrelation functions of P-wave vertical velocity fluctuations. We have applied a cluster analysis to total quality factor attenuation ( {Q}_t^{-1} ) and scattering quality factor attenuation ( {Q}_{PSc}^{-1} ) images to interpret the structures in terms of intrinsic and scattering attenuation variations on a 2D plane, corresponding to a depth of 2000 m, and check the robustness of the scattering imaging. The results show that scattering patterns are similar to total attenuation patterns in the south of the island. There are two main areas where patterns differ: at Cañadas-Teide-Pico Viejo Complex, high total attenuation and average-to-low scattering values are observed. We interpret the difference as induced by intrinsic attenuation. In the Santiago Ridge Zone (SRZ) region, high scattering values correspond to average total attenuation. In our interpretation, the anomaly is induced by an extended scatterer, geometrically related to the surficial traces of Garachico and El Chinyero historical eruptions and the area of highest seismic activity during the 2004-2008 seismic crises.

Disappointment Reach, Australia as seen from STS-67 Endeavour

NASA Technical Reports Server (NTRS)

1995-01-01

A nearly vertical view of Disappointment Reach and surroundings. Ripple-like patterns extending at right angles to the tidal flow can be discerned on shoals. Relict sand dune patterns, crests unvegetated, are evident on the western side of the estuary. Red mud brought down the Mooramel River on the east side of the estuary does extend into the shallow water of the inter-tidal lagoons. Most of the light-colored water along the coast, represents shoals of lime sediment. Patterns of sediment distribution by tides, waves, streams, and wind combine to create a complex and colorful scene.

Disappointment Reach, Australia as seen from STS-67 Endeavour

NASA Image and Video Library

1995-03-14

A nearly vertical view of Disappointment Reach and surroundings. Ripple-like patterns extending at right angles to the tidal flow can be discerned on shoals. Relict sand dune patterns, crests unvegetated, are evident on the western side of the estuary. Red mud brought down the Mooramel River on the east side of the estuary does extend into the shallow water of the inter-tidal lagoons. Most of the light-colored water along the coast, represents shoals of lime sediment. Patterns of sediment distribution by tides, waves, streams, and wind combine to create a complex and colorful scene.

Spatiotemporal chaos involving wave instability.

PubMed

Berenstein, Igal; Carballido-Landeira, Jorge

2017-01-01

In this paper, we investigate pattern formation in a model of a reaction confined in a microemulsion, in a regime where both Turing and wave instability occur. In one-dimensional systems, the pattern corresponds to spatiotemporal intermittency where the behavior of the systems alternates in both time and space between stationary Turing patterns and traveling waves. In two-dimensional systems, the behavior initially may correspond to Turing patterns, which then turn into wave patterns. The resulting pattern also corresponds to a chaotic state, where the system alternates in both space and time between standing wave patterns and traveling waves, and the local dynamics may show vanishing amplitude of the variables.

Spatiotemporal chaos involving wave instability

NASA Astrophysics Data System (ADS)

Berenstein, Igal; Carballido-Landeira, Jorge

2017-01-01

In this paper, we investigate pattern formation in a model of a reaction confined in a microemulsion, in a regime where both Turing and wave instability occur. In one-dimensional systems, the pattern corresponds to spatiotemporal intermittency where the behavior of the systems alternates in both time and space between stationary Turing patterns and traveling waves. In two-dimensional systems, the behavior initially may correspond to Turing patterns, which then turn into wave patterns. The resulting pattern also corresponds to a chaotic state, where the system alternates in both space and time between standing wave patterns and traveling waves, and the local dynamics may show vanishing amplitude of the variables.

Observations and interpretation of fundamental mode Rayleigh wavefields recorded by the Transportable Array (USArray)

USGS Publications Warehouse

Pollitz, F.F.

2008-01-01

Broadband recordings of the dense Transportable Array (TA) in the western United States provide unparalleled detailed images of long-period seismic surface wavefields. With 400 stations spanning most of the western United States, wavefronts of fundamental mode Rayleigh waves may be visualized coherently across the array at periods ???40 s. In order to constrain the Rayleigh wave phase velocity structure in the western United States, I assemble a data set of vertical component seismograms from 53 teleseismic events recorded by the TA from April 2006 to October 2007. Complex amplitude spectra from these recordings at peni ods 27-100 s are interpreted using the multiplane wave tomographic method of Friederich and Wielandt (1995) and Pollitz (1999). This analysis yields detailed surface wave phase velocity and three-dimensional shear wave velocity patterns across the North American plate boundary zone, elucidating the active processes in the highly heterogeneous western U.S. upper mantle.

Acoustofluidic waveguides for localized control of acoustic wavefront in microfluidics

PubMed Central

Bian, Yusheng; Guo, Feng; Yang, Shujie; Mao, Zhangming; Bachman, Hunter; Tang, Shi-Yang; Ren, Liqiang; Zhang, Bin; Gong, Jianying; Guo, Xiasheng

2017-01-01

The precise manipulation of acoustic fields in microfluidics is of critical importance for the realization of many biomedical applications. Despite the tremendous efforts devoted to the field of acoustofluidics during recent years, dexterous control, with an arbitrary and complex acoustic wavefront, in a prescribed, microscale region is still out of reach. Here, we introduce the concept of acoustofluidic waveguide, a three-dimensional compact configuration that is capable of locally guiding acoustic waves into a fluidic environment. Through comprehensive numerical simulations, we revealed the possibility of forming complex field patterns with defined pressure nodes within a highly localized, pre-determined region inside the microfluidic chamber. We also demonstrated the tunability of the acoustic field profile through controlling the size and shape of the waveguide geometry, as well as the operational frequency of the acoustic wave. The feasibility of the waveguide concept was experimentally verified via microparticle trapping and patterning. Our acoustofluidic waveguiding structures can be readily integrated with other microfluidic configurations and can be further designed into more complex types of passive acoustofluidic devices. The waveguide platform provides a promising alternative to current acoustic manipulation techniques and is useful in many applications such as single-cell analysis, point-of-care diagnostics, and studies of cell–cell interactions. PMID:29358901

Effect of Velocity of Detonation of Explosives on Seismic Radiation

NASA Astrophysics Data System (ADS)

Stroujkova, A. F.; Leidig, M.; Bonner, J. L.

2014-12-01

We studied seismic body wave generation from four fully contained explosions of approximately the same yields (68 kg of TNT equivalent) conducted in anisotropic granite in Barre, VT. The explosions were detonated using three types of explosives with different velocities of detonation (VOD): Black Powder (BP), Ammonium Nitrate Fuel Oil/Emulsion (ANFO), and Composition B (COMP B). The main objective of the experiment was to study differences in seismic wave generation among different types of explosives, and to determine the mechanism responsible for these differences. The explosives with slow burn rate (BP) produced lower P-wave amplitude and lower corner frequency, which resulted in lower seismic efficiency (0.35%) in comparison with high burn rate explosives (2.2% for ANFO and 3% for COMP B). The seismic efficiency estimates for ANFO and COMP B agree with previous studies for nuclear explosions in granite. The body wave radiation pattern is consistent with an isotropic explosion with an added azimuthal component caused by vertical tensile fractures oriented along pre-existing micro-fracturing in the granite, although the complexities in the P- and S-wave radiation patterns suggest that more than one fracture orientation could be responsible for their generation. High S/P amplitude ratios and low P-wave amplitudes suggest that a significant fraction of the BP source mechanism can be explained by opening of the tensile fractures as a result of the slow energy release.

When holography meets coherent diffraction imaging.

PubMed

Latychevskaia, Tatiana; Longchamp, Jean-Nicolas; Fink, Hans-Werner

2012-12-17

The phase problem is inherent to crystallographic, astronomical and optical imaging where only the intensity of the scattered signal is detected and the phase information is lost and must somehow be recovered to reconstruct the object's structure. Modern imaging techniques at the molecular scale rely on utilizing novel coherent light sources like X-ray free electron lasers for the ultimate goal of visualizing such objects as individual biomolecules rather than crystals. Here, unlike in the case of crystals where structures can be solved by model building and phase refinement, the phase distribution of the wave scattered by an individual molecule must directly be recovered. There are two well-known solutions to the phase problem: holography and coherent diffraction imaging (CDI). Both techniques have their pros and cons. In holography, the reconstruction of the scattered complex-valued object wave is directly provided by a well-defined reference wave that must cover the entire detector area which often is an experimental challenge. CDI provides the highest possible, only wavelength limited, resolution, but the phase recovery is an iterative process which requires some pre-defined information about the object and whose outcome is not always uniquely-defined. Moreover, the diffraction patterns must be recorded under oversampling conditions, a pre-requisite to be able to solve the phase problem. Here, we report how holography and CDI can be merged into one superior technique: holographic coherent diffraction imaging (HCDI). An inline hologram can be recorded by employing a modified CDI experimental scheme. We demonstrate that the amplitude of the Fourier transform of an inline hologram is related to the complex-valued visibility, thus providing information on both, the amplitude and the phase of the scattered wave in the plane of the diffraction pattern. With the phase information available, the condition of oversampling the diffraction patterns can be relaxed, and the phase problem can be solved in a fast and unambiguous manner. We demonstrate the reconstruction of various diffraction patterns of objects recorded with visible light as well as with low-energy electrons. Although we have demonstrated our HCDI method using laser light and low-energy electrons, it can also be applied to any other coherent radiation such as X-rays or high-energy electrons.

The dynamics of folding instability in a constrained Cosserat medium

NASA Astrophysics Data System (ADS)

Gourgiotis, Panos A.; Bigoni, Davide

2017-04-01

Different from Cauchy elastic materials, generalized continua, and in particular constrained Cosserat materials, can be designed to possess extreme (near a failure of ellipticity) orthotropy properties and in this way to model folding in a three-dimensional solid. Following this approach, folding, which is a narrow zone of highly localized bending, spontaneously emerges as a deformation pattern occurring in a strongly anisotropic solid. How this peculiar pattern interacts with wave propagation in the time-harmonic domain is revealed through the derivation of an antiplane, infinite-body Green's function, which opens the way to integral techniques for anisotropic constrained Cosserat continua. Viewed as a perturbing agent, the Green's function shows that folding, emerging near a steadily pulsating source in the limit of failure of ellipticity, is transformed into a disturbance with wavefronts parallel to the folding itself. The results of the presented study introduce the possibility of exploiting constrained Cosserat solids for propagating waves in materials displaying origami patterns of deformation. This article is part of the themed issue 'Patterning through instabilities in complex media: theory and applications.'

Anisotropic dispersion and attenuation due to wave-induced fluid flow: Quasi-static finite element modeling in poroelastic solids

NASA Astrophysics Data System (ADS)

Wenzlau, F.; Altmann, J. B.; Müller, T. M.

2010-07-01

Heterogeneous porous media such as hydrocarbon reservoir rocks are effectively described as anisotropic viscoelastic solids. They show characteristic velocity dispersion and attenuation of seismic waves within a broad frequency band, and an explanation for this observation is the mechanism of wave-induced pore fluid flow. Various theoretical models quantify dispersion and attenuation of normal incident compressional waves in finely layered porous media. Similar models of shear wave attenuation are not known, nor do general theories exist to predict wave-induced fluid flow effects in media with a more complex distribution of medium heterogeneities. By using finite element simulations of poroelastic relaxation, the total frequency-dependent complex stiffness tensor can be computed for a porous medium with arbitrary internal heterogeneity. From the stiffness tensor, velocity dispersion and frequency-dependent attenuation are derived for compressional and shear waves as a function of the angle of incidence. We apply our approach to the case of layered media and to that of an ellipsoidal poroelastic inclusion. In the case of the ellipsoidal inclusion, compressional and shear wave modes show significant attenuation, and the characteristic frequency dependence of the effect is governed by the spatiotemporal scale of the pore fluid pressure relaxation. In our anisotropic examples, the angle dependence of the attenuation is stronger than that of the velocity dispersion. It becomes clear that the spatial attenuation patterns show specific characteristics of wave-induced fluid flow, implying that anisotropic attenuation measurements may contribute to the inversion of fluid transport properties in heterogeneous porous media.

Acoustic wave propagation in heterogeneous structures including experimental validation

NASA Technical Reports Server (NTRS)

Baumeister, Kenneth J.; Dahl, Milo D.

1989-01-01

A finite element model was developed to solve for the acoustic pressure and energy fields in a heterogeneous suppressor. The derivations from the governing equations assumed that the material properties could vary with position resulting in a heterogeneous variable property two-dimensional wave equation. This eliminated the necessity of finding the boundary conditions between different materials. For a two-media region consisting of part air and part bulk absorber, a model was used to describe the bulk absorber properties in two directions. Complex metallic structures inside the air duct are simulated by simply changing element properties from air to the structural material in a pattern to describe the desired shapes. To verify the numerical theory, experiments were conducted without flow in a rectangular duct with a single folded cavity mounted above the duct and absorbing material mounted inside a cavity. Changes in a nearly plane wave sound field were measured on the wall opposite the absorbing cavity. Fairly good agreement was found in the standing wave pattern upstream of the absorber and in the decay of pressure level opposite the absorber, as a function of distance along the duct. The finite element model provides a convenient method for evaluating the acoustic properties of bulk absorbers.

Material fabrication using acoustic radiation forces

DOEpatents

Sinha, Naveen N.; Sinha, Dipen N.; Goddard, Gregory Russ

2015-12-01

Apparatus and methods for using acoustic radiation forces to order particles suspended in a host liquid are described. The particles may range in size from nanometers to millimeters, and may have any shape. The suspension is placed in an acoustic resonator cavity, and acoustical energy is supplied thereto using acoustic transducers. The resulting pattern may be fixed by using a solidifiable host liquid, forming thereby a solid material. Patterns may be quickly generated; typical times ranging from a few seconds to a few minutes. In a one-dimensional arrangement, parallel layers of particles are formed. With two and three dimensional transducer arrangements, more complex particle configurations are possible since different standing-wave patterns may be generated in the resonator. Fabrication of periodic structures, such as metamaterials, having periods tunable by varying the frequency of the acoustic waves, on surfaces or in bulk volume using acoustic radiation forces, provides great flexibility in the creation of new materials. Periodicities may range from millimeters to sub-micron distances, covering a large portion of the range for optical and acoustical metamaterials.

Retinal Wave Patterns Are Governed by Mutual Excitation among Starburst Amacrine Cells and Drive the Refinement and Maintenance of Visual Circuits

PubMed Central

Xu, Hong-Ping; Burbridge, Timothy J.; Ye, Meijun; Chen, Minggang; Ge, Xinxin; Zhou, Z. Jimmy

2016-01-01

Retinal waves are correlated bursts of spontaneous activity whose spatiotemporal patterns are critical for early activity-dependent circuit elaboration and refinement in the mammalian visual system. Three separate developmental wave epochs or stages have been described, but the mechanism(s) of pattern generation of each and their distinct roles in visual circuit development remain incompletely understood. We used neuroanatomical, in vitro and in vivo electrophysiological, and optical imaging techniques in genetically manipulated mice to examine the mechanisms of wave initiation and propagation and the role of wave patterns in visual circuit development. Through deletion of β2 subunits of nicotinic acetylcholine receptors (β2-nAChRs) selectively from starburst amacrine cells (SACs), we show that mutual excitation among SACs is critical for Stage II (cholinergic) retinal wave propagation, supporting models of wave initiation and pattern generation from within a single retinal cell type. We also demonstrate that β2-nAChRs in SACs, and normal wave patterns, are necessary for eye-specific segregation. Finally, we show that Stage III (glutamatergic) retinal waves are not themselves necessary for normal eye-specific segregation, but elimination of both Stage II and Stage III retinal waves dramatically disrupts eye-specific segregation. This suggests that persistent Stage II retinal waves can adequately compensate for Stage III retinal wave loss during the development and refinement of eye-specific segregation. These experiments confirm key features of the “recurrent network” model for retinal wave propagation and clarify the roles of Stage II and Stage III retinal wave patterns in visual circuit development. SIGNIFICANCE STATEMENT Spontaneous activity drives early mammalian circuit development, but the initiation and patterning of activity vary across development and among modalities. Cholinergic “retinal waves” are initiated in starburst amacrine cells and propagate to retinal ganglion cells and higher-order visual areas, but the mechanism responsible for creating their unique and critical activity pattern is incompletely understood. We demonstrate that cholinergic wave patterns are dictated by recurrent connectivity within starburst amacrine cells, and retinal ganglion cells act as “readouts” of patterned activity. We also show that eye-specific segregation occurs normally without glutamatergic waves, but elimination of both cholinergic and glutamatergic waves completely disrupts visual circuit development. These results suggest that each retinal wave pattern during development is optimized for concurrently refining multiple visual circuits. PMID:27030771

Boundary-driven anomalous spirals in oscillatory media

NASA Astrophysics Data System (ADS)

Kessler, David A.; Levine, Herbert

2017-06-01

We study a heretofore ignored class of spiral patterns in oscillatory media as characterized by the complex Landau-Ginzburg model. These spirals emerge from modulating the growth rate as a function of r, thereby turning off the instability at large r. They are uniquely determined by matching to this outer condition, lifting a degeneracy in the set of steady-state solutions of the original equations. Unlike the well-studied spiral which acts as a wave source, has a simple core structure and is insensitive to the details of the boundary on which no-flux conditions are imposed, these new spirals are wave sinks, have non-monotonic wavefront curvature near the core, and can be patterned by the form of the spatial boundary. We predict that these anomalous spirals could be produced in nonlinear optics experiments via spatially modulating the gain of the medium.

Optical analysis of laser systems using interferometry

NASA Astrophysics Data System (ADS)

Viswanathan, V. K.; Liberman, I.; Lawrence, G.; Seery, B. D.

1980-06-01

It is noted that previous approaches of predicting focal spot parameters involved the digitization of interference patterns of the optical components and propagation of the complex amplitude and phase of the wave front throughout the system. The present paper describes an approach in which the computational procedure is extended to produce computer plots of the final emerging wave front. It is shown that this enables direct comparison with the experimentally produced wave front of the total system and makes possible the optical analysis, design, and possible optimization of laser systems. A description is given of the computational procedure and the Twyman-Green and Smartt IR interferometers constructed to verify this approach. Finally, consideration is given to the implications of the results.

Sources of and Remedies for Removing Unwanted Reflections in Millimeter Wave Images of Complex SOFI-Covered Space Shuttle Structures

NASA Technical Reports Server (NTRS)

Kharkovsky, S.; Zoughi, R.; Hepburn, Frank L.

2007-01-01

In the recent years, continuous-wave near-field and lens-focused millimeter wave imaging systems have been effectively used to demonstrate their utility for producing high-resolution images of metallic structures covered with spay on foam insulation (SOFI) such as the Space Shuttle external fuel tank. However, for some specific structures a certain interference -pattern may be superimposed on the produced images. There are methods by which the influence of this unwanted interference can be reduced, such as the incorporation of an incidence .angle and the proper use of signal polarization. This paper presents the basics of this problem and describes the use of the methods for reducing this unwanted influence through specific examples.

Retinal Wave Patterns Are Governed by Mutual Excitation among Starburst Amacrine Cells and Drive the Refinement and Maintenance of Visual Circuits.

PubMed

Xu, Hong-Ping; Burbridge, Timothy J; Ye, Meijun; Chen, Minggang; Ge, Xinxin; Zhou, Z Jimmy; Crair, Michael C

2016-03-30

Retinal waves are correlated bursts of spontaneous activity whose spatiotemporal patterns are critical for early activity-dependent circuit elaboration and refinement in the mammalian visual system. Three separate developmental wave epochs or stages have been described, but the mechanism(s) of pattern generation of each and their distinct roles in visual circuit development remain incompletely understood. We used neuroanatomical,in vitroandin vivoelectrophysiological, and optical imaging techniques in genetically manipulated mice to examine the mechanisms of wave initiation and propagation and the role of wave patterns in visual circuit development. Through deletion of β2 subunits of nicotinic acetylcholine receptors (β2-nAChRs) selectively from starburst amacrine cells (SACs), we show that mutual excitation among SACs is critical for Stage II (cholinergic) retinal wave propagation, supporting models of wave initiation and pattern generation from within a single retinal cell type. We also demonstrate that β2-nAChRs in SACs, and normal wave patterns, are necessary for eye-specific segregation. Finally, we show that Stage III (glutamatergic) retinal waves are not themselves necessary for normal eye-specific segregation, but elimination of both Stage II and Stage III retinal waves dramatically disrupts eye-specific segregation. This suggests that persistent Stage II retinal waves can adequately compensate for Stage III retinal wave loss during the development and refinement of eye-specific segregation. These experiments confirm key features of the "recurrent network" model for retinal wave propagation and clarify the roles of Stage II and Stage III retinal wave patterns in visual circuit development. Spontaneous activity drives early mammalian circuit development, but the initiation and patterning of activity vary across development and among modalities. Cholinergic "retinal waves" are initiated in starburst amacrine cells and propagate to retinal ganglion cells and higher-order visual areas, but the mechanism responsible for creating their unique and critical activity pattern is incompletely understood. We demonstrate that cholinergic wave patterns are dictated by recurrent connectivity within starburst amacrine cells, and retinal ganglion cells act as "readouts" of patterned activity. We also show that eye-specific segregation occurs normally without glutamatergic waves, but elimination of both cholinergic and glutamatergic waves completely disrupts visual circuit development. These results suggest that each retinal wave pattern during development is optimized for concurrently refining multiple visual circuits. Copyright © 2016 the authors 0270-6474/16/363872-16$15.00/0.

Validity of the Rapid Eating Assessment for Patients for assessing dietary patterns in NCAA athletes.

PubMed

Kurka, Jonathan M; Buman, Matthew P; Ainsworth, Barbara E

2014-01-01

Athletes may be at risk for developing adverse health outcomes due to poor eating behaviors during college. Due to the complex nature of the diet, it is difficult to include or exclude individual food items and specific food groups from the diet. Eating behaviors may better characterize the complex interactions between individual food items and specific food groups. The purpose was to examine the Rapid Eating Assessment for Patients survey (REAP) as a valid tool for analyzing eating behaviors of NCAA Division-I male and female athletes using pattern identification. Also, to investigate the relationships between derived eating behavior patterns and body mass index (BMI) and waist circumference (WC) while stratifying by sex and aesthetic nature of the sport. Two independent samples of male (n = 86; n = 139) and female (n = 64; n = 102) collegiate athletes completed the REAP in June-August 2011 (n = 150) and June-August 2012 (n = 241). Principal component analysis (PCA) determined possible factors using wave-1 athletes. Exploratory (EFA) and confirmatory factor analyses (CFA) determined factors accounting for error and confirmed model fit in wave-2 athletes. Wave-2 athletes' BMI and WC were recorded during a physical exam and sport participation determined classification in aesthetic and non-aesthetic sport. Mean differences in eating behavior pattern score were explored. Regression models examined interactions between pattern scores, participation in aesthetic or non-aesthetic sport, and BMI and waist circumference controlling for age and race. A 5-factor PCA solution accounting for 60.3% of sample variance determined fourteen questions for EFA and CFA. A confirmed solution revealed patterns of Desserts, Healthy food, Meats, High-fat food, and Dairy. Pattern score (mean ± SE) differences were found, as non-aesthetic sport males had a higher (better) Dessert score than aesthetic sport males (2.16 ± 0.07 vs. 1.93 ± 0.11). Female aesthetic athletes had a higher score compared to non-aesthetic female athletes for the Dessert (2.11 ± 0.11 vs. 1.88 ± 0.08), Meat (1.95 ± 0.10 vs. 1.72 ± 0.07), High-fat food (1.70 ± 0.08 vs. 1.46 ± 0.06), and Dairy (1.70 ± 0.11 vs. 1.43 ± 0.07) patterns. REAP is a construct valid tool to assess dietary patterns in college athletes. In light of varying dietary patterns, college athletes should be evaluated for healthful and unhealthful eating behaviors.

Upper mantle structure of shear-waves velocities and stratification of anisotropy in the Afar Hotspot region

NASA Astrophysics Data System (ADS)

Sicilia, D.; Montagner, J.-P.; Cara, M.; Stutzmann, E.; Debayle, E.; Lépine, J.-C.; Lévêque, J.-J.; Beucler, E.; Sebai, A.; Roult, G.; Ayele, A.; Sholan, J. M.

2008-12-01

The Afar area is one of the biggest continental hotspots active since about 30 Ma. It may be the surface expression of a mantle "plume" related to the African Superswell. Central Africa is also characterized by extensive intraplate volcanism. Around the same time (30 Ma), volcanic activity re-started in several regions of the African plate and hotspots such as Darfur, Tibesti, Hoggar and Mount Cameroon, characterized by a significant though modest volcanic production. The interactions of mantle upwelling with asthenosphere, lithosphere and crust remain unclear and seismic anisotropy might help in investigating these complex interactions. We used data from the global seismological permanent FDSN networks (GEOSCOPE, IRIS, MedNet, GEO- FON, etc.), from the temporary PASSCAL experiments in Tanzania and Saudi Arabia and a French deployment of 5 portable broadband stations surrounding the Afar Hotspot. A classical two-step tomographic inversion from surface waves performed in the Horn of Africa with selected Rayleigh wave and Love wave seismograms leads to a 3D-model of both S V velocities and azimuthal anisotropy, as well as radial SH/ SV anisotropy, with a lateral resolution of 500 km. The region is characterized by low shear-wave velocities beneath the Afar Hotspot, the Red Sea, the Gulf of Aden and East of the Tanzania Craton to 400 km depth. High velocities are present in the Eastern Arabia and the Tanzania Craton. The results of this study enable us to rule out a possible feeding of the Central Africa hotspots from the "Afar plume" above 150-200 km. The azimuthal anisotropy displays a complex pattern near the Afar Hotspot. Radial anisotropy, although poorly resolved laterally, exhibits S H slower than S V waves down to about 150 km depth, and a reverse pattern below. Both azimuthal and radial anisotropies show a stratification of anisotropy at depth, corresponding to different physical processes. These results suggest that the Afar hotspot has a different and deeper origin than the other African hotspots (Darfur, Tibesti, Hoggar). These latter hotspots can be traced down to 200 km from S-wave velocity but have no visible effect on radial and azimuthal anisotropy.

Neutrophils establish rapid and robust WAVE complex polarity in an actin-dependent fashion.

PubMed

Millius, Arthur; Dandekar, Sheel N; Houk, Andrew R; Weiner, Orion D

2009-02-10

Asymmetric intracellular signals enable cells to migrate in response to external cues. The multiprotein WAVE (also known as SCAR or WASF) complex activates the actin-nucleating Arp2/3 complex [1-4] and localizes to propagating "waves," which direct actin assembly during neutrophil migration [5, 6]. Here, we observe similar WAVE complex dynamics in other mammalian cells and analyze WAVE complex dynamics during establishment of neutrophil polarity. Earlier models proposed that spatially biased generation [7] or selection of protrusions [8] enables chemotaxis. These models require existing morphological polarity to control protrusions. We show that spatially biased generation and selection of WAVE complex recruitment also occur in morphologically unpolarized neutrophils during development of their first protrusions. Additionally, several mechanisms limit WAVE complex recruitment during polarization and movement: Intrinsic cues restrict WAVE complex distribution during establishment of polarity, and asymmetric intracellular signals constrain it in morphologically polarized cells. External gradients can overcome both intrinsic biases and control WAVE complex localization. After latrunculin-mediated inhibition of actin polymerization, addition and removal of agonist gradients globally recruits and releases the WAVE complex from the membrane. Under these conditions, the WAVE complex no longer polarizes, despite the presence of strong external gradients. Thus, actin polymer and the WAVE complex reciprocally interact during polarization.

Choline-mediated modulation of hippocampal sharp wave-ripple complexes in vitro.

PubMed

Fischer, Viktoria; Both, Martin; Draguhn, Andreas; Egorov, Alexei V

2014-06-01

The cholinergic system is critically involved in the modulation of cognitive functions, including learning and memory. Acetylcholine acts through muscarinic (mAChRs) and nicotinic receptors (nAChRs), which are both abundantly expressed in the hippocampus. Previous evidence indicates that choline, the precursor and degradation product of Acetylcholine, can itself activate nAChRs and thereby affects intrinsic and synaptic neuronal functions. Here, we asked whether the cellular actions of choline directly affect hippocampal network activity. Using mouse hippocampal slices we found that choline efficiently suppresses spontaneously occurring sharp wave-ripple complexes (SPW-R) and can induce gamma oscillations. In addition, choline reduces synaptic transmission between hippocampal subfields CA3 and CA1. Surprisingly, these effects are mediated by activation of both mAChRs and α7-containing nAChRs. Most nicotinic effects became only apparent after local, fast application of choline, indicating rapid desensitization kinetics of nAChRs. Effects were still present following block of choline uptake and are, therefore, likely because of direct actions of choline at the respective receptors. Together, choline turns out to be a potent regulator of patterned network activity within the hippocampus. These actions may be of importance for understanding state transitions in normal and pathologically altered neuronal networks. In this study we asked whether choline, the precursor and degradation product of acetylcholine, directly affects hippocampal network activity. Using mouse hippocampal slices we found that choline efficiently suppresses spontaneously occurring sharp wave-ripple complexes (SPW-R). In addition, choline reduces synaptic transmission between hippocampal subfields. These effects are mediated by direct activation of muscarinic as well as nicotinic cholinergic pathways. Together, choline turns out to be a potent regulator of patterned activity within hippocampal networks. © 2014 International Society for Neurochemistry.

Mesoscale Variability in SUCCESS Data

NASA Technical Reports Server (NTRS)

Eckermann, Stephen D.; Stewart, Richard W. (Technical Monitor)

1998-01-01

Analysis of meteorological, chemical and microphysical data from the airborne SUCCESS (SUbsonic aircraft Contrail and Cloud Effects Special Study) mission is reported. Careful analysis of the complex DC-8 flight pattern of May 2, 1996 reveals 19 linear flight segments within six main geographical areas, which we have analyzed. Significant mountain wave activity is revealed in the data from the MMS (Meteorology Measurement System) and MTP (Microwave Temperature Profiler) instruments on the DC-8, which resembles previous observations of mountain wave structures near Boulder, Colorado. Strong mountain-wave-induced upwelling downwind of the Rockies is noted. Turbulence is also noted in regions of the mountain wave consistent with overturning near the tropopause. Zonal winds recorded on the ER-2 are shown to be consistent with mountain wave breaking at or near critical levels in the stratosphere, consistent with the strong turbulence reported by the pilot during the ER-2 flight. These observations have been supported with spectral analyses and modeling studies. 'Postcasts' of mountain wave activity on May 2, 1996 using the Naval Research Laboratory Mountain Wave Forecast Model predicts both strong mountain wave activity near the tropopause and strong mountain-wave-induced turbulence in the stratosphere.

Two genetic loci control syllable sequences of ultrasonic courtship vocalizations in inbred mice

PubMed Central

2011-01-01

Background The ultrasonic vocalizations (USV) of courting male mice are known to possess a phonetic structure with a complex combination of several syllables. The genetic mechanisms underlying the syllable sequence organization were investigated. Results This study compared syllable sequence organization in two inbred strains of mice, 129S4/SvJae (129) and C57BL6J (B6), and demonstrated that they possessed two mutually exclusive phenotypes. The 129S4/SvJae (129) strain frequently exhibited a "chevron-wave" USV pattern, which was characterized by the repetition of chevron-type syllables. The C57BL/6J strain produced a "staccato" USV pattern, which was characterized by the repetition of short-type syllables. An F1 strain obtained by crossing the 129S4/SvJae and C57BL/6J strains produced only the staccato phenotype. The chevron-wave and staccato phenotypes reappeared in the F2 generations, following the Mendelian law of independent assortment. Conclusions These results suggest that two genetic loci control the organization of syllable sequences. These loci were occupied by the staccato and chevron-wave alleles in the B6 and 129 mouse strains, respectively. Recombination of these alleles might lead to the diversity of USV patterns produced by mice. PMID:22018021

Left atrial pressure pattern without a-wave in sinus rhythm after cardioversion affects the outcomes after catheter ablation for atrial fibrillation.

PubMed

Kishima, Hideyuki; Mine, Takanao; Takahashi, Satoshi; Ashida, Kenki; Ishihara, Masaharu; Masuyama, Tohru

2018-04-24

The a-wave in left atrial pressure (LAP) is often not observed after cardioversion (CV). We hypothesized that repeated atrial fibrillation (AF) occurs in patients who do not show a-wave pattern after CV. We investigated the impact of "LAP pattern without a-wave" on the outcome after catheter ablation (CA) for AF. We studied 100 patients (64 males, age 66 ± 8 years, 42 with non-paroxysmal AF) who underwent CA for AF. Sustained- or induced-AF were terminated with internal CV, and LAP was measured during sinus rhythm (SR) after CV. LAP pattern without a-wave was defined as absence of a-wave (the "a-wave" was defined as a protruding part by 0.2 mmHg or more from the baseline) in LAP wave form. AF was terminated with CV in all patients. Recurrent AF was detected in 35/100 (35%) during the follow-up period (13.1 ± 7.8 month). Univariate analysis revealed higher prevalence of LAP pattern without a-wave (71 vs. 17%, P < 0.0001), larger left atrial volume, elevated E wave, and decreased deceleration time as significant variables. On multivariate analysis, LAP pattern without a-wave was only independently associated with recurrent AF (P = 0.0014, OR 9.865, 95% CI 2.327-54.861). Moreover, patients with LAP pattern without a-wave had a higher risk of recurrent AF than patients with a-wave (25/36 patients, 69 vs. 10/64 patients, 16%, log-rank P < 0.0001). Left atrial pressure pattern without a-wave in sinus rhythm after cardioversion could predict recurrence after catheter ablation for AF.

Generation of Customizable Micro-wavy Pattern through Grayscale Direct Image Lithography

PubMed Central

He, Ran; Wang, Shunqiang; Andrews, Geoffrey; Shi, Wentao; Liu, Yaling

2016-01-01

With the increasing amount of research work in surface studies, a more effective method of producing patterned microstructures is highly desired due to the geometric limitations and complex fabricating process of current techniques. This paper presents an efficient and cost-effective method to generate customizable micro-wavy pattern using direct image lithography. This method utilizes a grayscale Gaussian distribution effect to model inaccuracies inherent in the polymerization process, which are normally regarded as trivial matters or errors. The measured surface profiles and the mathematical prediction show a good agreement, demonstrating the ability of this method to generate wavy patterns with precisely controlled features. An accurate pattern can be generated with customizable parameters (wavelength, amplitude, wave shape, pattern profile, and overall dimension). This mask-free photolithography approach provides a rapid fabrication method that is capable of generating complex and non-uniform 3D wavy patterns with the wavelength ranging from 12 μm to 2100 μm and an amplitude-to-wavelength ratio as large as 300%. Microfluidic devices with pure wavy and wavy-herringbone patterns suitable for capture of circulating tumor cells are made as a demonstrative application. A completely customized microfluidic device with wavy patterns can be created within a few hours without access to clean room or commercial photolithography equipment. PMID:26902520

High-order rogue waves of the Benjamin-Ono equation and the nonlocal nonlinear Schrödinger equation

NASA Astrophysics Data System (ADS)

Liu, Wei

2017-10-01

High-order rogue wave solutions of the Benjamin-Ono equation and the nonlocal nonlinear Schrödinger equation are derived by employing the bilinear method, which are expressed by simple polynomials. Typical dynamics of these high-order rogue waves are studied by analytical and graphical ways. For the Benjamin-Ono equation, there are two types of rogue waves, namely, bright rogue waves and dark rogue waves. In particular, the fundamental rogue wave pattern is different from the usual fundamental rogue wave patterns in other soliton equations. For the nonlocal nonlinear Schrödinger equation, the exact explicit rogue wave solutions up to the second order are presented. Typical rogue wave patterns such as Peregrine-type, triple and fundamental rogue waves are put forward. These high-order rogue wave patterns have not been shown before in the nonlocal Schrödinger equation.

Defects formation and spiral waves in a network of neurons in presence of electromagnetic induction.

PubMed

Rostami, Zahra; Jafari, Sajad

2018-04-01

Complex anatomical and physiological structure of an excitable tissue (e.g., cardiac tissue) in the body can represent different electrical activities through normal or abnormal behavior. Abnormalities of the excitable tissue coming from different biological reasons can lead to formation of some defects. Such defects can cause some successive waves that may end up to some additional reorganizing beating behaviors like spiral waves or target waves. In this study, formation of defects and the resulting emitted waves in an excitable tissue are investigated. We have considered a square array network of neurons with nearest-neighbor connections to describe the excitable tissue. Fundamentally, electrophysiological properties of ion currents in the body are responsible for exhibition of electrical spatiotemporal patterns. More precisely, fluctuation of accumulated ions inside and outside of cell causes variable electrical and magnetic field. Considering undeniable mutual effects of electrical field and magnetic field, we have proposed the new Hindmarsh-Rose (HR) neuronal model for the local dynamics of each individual neuron in the network. In this new neuronal model, the influence of magnetic flow on membrane potential is defined. This improved model holds more bifurcation parameters. Moreover, the dynamical behavior of the tissue is investigated in different states of quiescent, spiking, bursting and even chaotic state. The resulting spatiotemporal patterns are represented and the time series of some sampled neurons are displayed, as well.

Free-surface tracking of submerged features to infer hydrodynamic flow characteristics

NASA Astrophysics Data System (ADS)

Mandel, Tracy; Rosenzweig, Itay; Koseff, Jeffrey

2016-11-01

As sea level rise and stronger storm events threaten our coastlines, increased attention has been focused on coastal vegetation as a potentially resilient, financially viable tool to mitigate flooding and erosion. However, the actual effect of this "green infrastructure" on near-shore wave fields and flow patterns is not fully understood. For example, how do wave setup, wave nonlinearity, and canopy-generated instabilities change due to complex bottom roughness? Answering this question requires detailed knowledge of the free surface. We develop easy-to-use laboratory techniques to remotely measure physical processes by imaging the apparent distortion of the fixed features of a submerged cylinder array. Measurements of surface turbulence from a canopy-generated Kelvin-Helmholtz instability are possible with a single camera. A stereoscopic approach similar to Morris (2004) and Gomit et al. (2013) allows for measurement of waveform evolution and the effect of vegetation on wave steepness and nonlinearity.

Processing of simple and complex acoustic signals in a tonotopically organized ear

PubMed Central

Hummel, Jennifer; Wolf, Konstantin; Kössl, Manfred; Nowotny, Manuela

2014-01-01

Processing of complex signals in the hearing organ remains poorly understood. This paper aims to contribute to this topic by presenting investigations on the mechanical and neuronal response of the hearing organ of the tropical bushcricket species Mecopoda elongata to simple pure tone signals as well as to the conspecific song as a complex acoustic signal. The high-frequency hearing organ of bushcrickets, the crista acustica (CA), is tonotopically tuned to frequencies between about 4 and 70 kHz. Laser Doppler vibrometer measurements revealed a strong and dominant low-frequency-induced motion of the CA when stimulated with either pure tone or complex stimuli. Consequently, the high-frequency distal area of the CA is more strongly deflected by low-frequency-induced waves than by high-frequency-induced waves. This low-frequency dominance will have strong effects on the processing of complex signals. Therefore, we additionally studied the neuronal response of the CA to native and frequency-manipulated chirps. Again, we found a dominant influence of low-frequency components within the conspecific song, indicating that the mechanical vibration pattern highly determines the neuronal response of the sensory cells. Thus, we conclude that the encoding of communication signals is modulated by ear mechanics. PMID:25339727

View of atmospheric wave patterns by effect of island on wind currents

NASA Image and Video Library

1973-12-14

SL4-137-3632 (February 1974) --- A photograph taken from the Skylab space station in Earth orbit illustrating an atmospheric wave pattern by the affect of a small mountainous island on wind currents. Various patterns can be seen downwind of small islands. Often a Von Karmon vortex can be seen which appears as a spiral pattern. Multiple vortices have been photographed on previous missions. This photograph illustrates a "bow wave" pattern which extends for hundreds of miles downwind from the island. The island itself is often clear when a wave pattern is formed downstream. This particular pattern is very symmetrical. These wave patterns are most common in the South Pacific. This picture was taken by a Skylab 4 crewmen using a hand-held 70mm Hasselblad camera. Photo credit: NASA

Earth observations taken by the Expedition 14 crew

NASA Image and Video Library

2007-03-10

ISS014-E-16597 (10 March 2007) --- Isles of Scilly, United Kingdom is featured in this image photographed by an Expedition 14 crewmember on the International Space Station. The Isles of Scilly, an archipelago of approximately 150 islands, is located some 44 kilometers southwest of the westernmost point of England (Land's End). According to scientists, the islands are an erosional remnant of an ancient granite intrusion, and are notable because they have been inhabited for over 4000 years. Historical and geological evidence cited by NASA scientists on the Isles indicates that many of the islands were larger and/or connected in the recent past--this could be due to local subsidence, rising sea levels, or a combination of both factors. Even today, it is possible to walk between certain islands during low tides. The Isles have been designated a United Kingdom Area of Outstanding Natural Beauty due to their unique landscape, ecology, and historical significance. The potential effect of rising sea level on the Isles is a primary concern for both long-term ecosystem health and human habitability. This image illustrates the geographic configuration of the archipelago, and its effect on ocean wave patterns. Long linear swells oriented northeast-southwest and moving to the southeast (from upper left to lower right) are diffracted (bent) as they approach the coastlines and small shoals of the Isles. The wave diffraction forms complex interacting surface patterns--this is most clearly visible southwest of St. Mary's island (left). The dominant ocean wave pattern resumes to the southeast of St. Mary's, but with an additional northwest-southeast oriented pattern superimposed, possibly due to winds originating in the English channel to the east (not shown). Suspended, tan-colored sediments visible within and around the archipelago are locally derived from continuing wave erosion of the granite forming the islands and remobilization of beach sands. Bright white areas in the photograph are waves breaking on shoals.

Interannual variability of the Submonthly Wave Patterns over the Western North Pacific

NASA Astrophysics Data System (ADS)

Ko, K. C.

2017-12-01

This study examines the interannual variability of the 5-16 day wave patterns by separating them into active (A4mV) and inactive (I4mV) years on the basis of the 4-month (July-October) variance of a Japan-South China Sea (JSCS) circulation index from 1979 to 2013. The sea surface temperature for the A4mV years exhibited an ENSO pattern but a reversed anomaly pattern was observed in the I4mV years. Composite results indicate that tropical cyclone (TC) tracks are closely linked to the activity of the wave patterns. When the wave patterns were strong with a solid wave structure in the A4mV years, TCs would follow the propagation routes of the cyclonic anomalies of the wave patterns and separated into two types of tracks: straight-moving and recurving. However, in the I4mV years when the wave patterns were weak and poorly organized, the shapes of the cyclonic anomalies became irregular and sporadic. The weakening structure of the wave patterns in the I4mV years would induce the TCs to undergo more scattered routes near Taiwan and east coast of China. Therefore, Taiwan experienced more rainfall in the I4mV years.

Wave Phenomena in Reaction-Diffusion Systems

NASA Astrophysics Data System (ADS)

Steinbock, Oliver; Engel, Harald

2013-12-01

Pattern formation in excitable and oscillatory reaction-diffusion systems provides intriguing examples for the emergence of macroscopic order from molecular reaction events and Brownian motion. Here we review recent results on several aspects of excitation waves including anomalous dispersion, vortex pinning, and three-dimensional scroll waves. Anomalies in the speed-wavelength dependence of pulse trains include nonmonotonic behavior, bistability, and velocity gaps. We further report on the hysteresis effects during the pinning-depinning transition of twodimensional spiral waves. The pinning of three-dimensional scroll waves shows even richer dynamic complexity, partly due to the possibility of geometric and topological mismatches between the unexcitable, pinning heterogeneities and the one-dimensional rotation backbone of the vortex. As examples we present results on the pinning of scroll rings to spherical, C-shaped, and genus-2-type heterogeneities. We also review the main results of several experimental studies employing the Belousov-Zhabotinsky reaction and briefly discuss the biomedical relevance of this research especially in the context of cardiology.

Modeling multiscale evolution of numerous voids in shocked brittle material.

PubMed

Yu, Yin; Wang, Wenqiang; He, Hongliang; Lu, Tiecheng

2014-04-01

The influence of the evolution of numerous voids on macroscopic properties of materials is a multiscale problem that challenges computational research. A shock-wave compression model for brittle material, which can obtain both microscopic evolution and macroscopic shock properties, was developed using discrete element methods (lattice model). Using a model interaction-parameter-mapping procedure, qualitative features, as well as trends in the calculated shock-wave profiles, are shown to agree with experimental results. The shock wave splits into an elastic wave and a deformation wave in porous brittle materials, indicating significant shock plasticity. Void collapses in the deformation wave were the natural reason for volume shrinkage and deformation. However, media slippage and rotation deformations indicated by complex vortex patterns composed of relative velocity vectors were also confirmed as an important source of shock plasticity. With increasing pressure, the contribution from slippage deformation to the final plastic strain increased. Porosity was found to determine the amplitude of the elastic wave; porosity and shock stress together determine propagation speed of the deformation wave, as well as stress and strain on the final equilibrium state. Thus, shock behaviors of porous brittle material can be systematically designed for specific applications.

High-Frequency Normal Mode Propagation in Aluminum Cylinders

USGS Publications Warehouse

Lee, Myung W.; Waite, William F.

2009-01-01

Acoustic measurements made using compressional-wave (P-wave) and shear-wave (S-wave) transducers in aluminum cylinders reveal waveform features with high amplitudes and with velocities that depend on the feature's dominant frequency. In a given waveform, high-frequency features generally arrive earlier than low-frequency features, typical for normal mode propagation. To analyze these waveforms, the elastic equation is solved in a cylindrical coordinate system for the high-frequency case in which the acoustic wavelength is small compared to the cylinder geometry, and the surrounding medium is air. Dispersive P- and S-wave normal mode propagations are predicted to exist, but owing to complex interference patterns inside a cylinder, the phase and group velocities are not smooth functions of frequency. To assess the normal mode group velocities and relative amplitudes, approximate dispersion relations are derived using Bessel functions. The utility of the normal mode theory and approximations from a theoretical and experimental standpoint are demonstrated by showing how the sequence of P- and S-wave normal mode arrivals can vary between samples of different size, and how fundamental normal modes can be mistaken for the faster, but significantly smaller amplitude, P- and S-body waves from which P- and S-wave speeds are calculated.

Instabilities and spatiotemporal patterns behind predator invasions with nonlocal prey competition.

PubMed

Merchant, Sandra M; Nagata, Wayne

2011-12-01

We study the influence of nonlocal intraspecies prey competition on the spatiotemporal patterns arising behind predator invasions in two oscillatory reaction-diffusion integro-differential models. We use three common types of integral kernels as well as develop a caricature system, to describe the influence of the standard deviation and kurtosis of the kernel function on the patterns observed. We find that nonlocal competition can destabilize the spatially homogeneous state behind the invasion and lead to the formation of complex spatiotemporal patterns, including stationary spatially periodic patterns, wave trains and irregular spatiotemporal oscillations. In addition, the caricature system illustrates how large standard deviation and low kurtosis facilitate the formation of these spatiotemporal patterns. This suggests that nonlocal competition may be an important mechanism underlying spatial pattern formation, particularly in systems where the competition between individuals varies over space in a platykurtic manner. Copyright © 2011 Elsevier Inc. All rights reserved.

Electromechanical vortex filaments during cardiac fibrillation

NASA Astrophysics Data System (ADS)

Christoph, J.; Chebbok, M.; Richter, C.; Schröder-Schetelig, J.; Bittihn, P.; Stein, S.; Uzelac, I.; Fenton, F. H.; Hasenfuß, G.; Gilmour, R. F., Jr.; Luther, S.

2018-03-01

The self-organized dynamics of vortex-like rotating waves, which are also known as scroll waves, are the basis of the formation of complex spatiotemporal patterns in many excitable chemical and biological systems. In the heart, filament-like phase singularities that are associated with three-dimensional scroll waves are considered to be the organizing centres of life-threatening cardiac arrhythmias. The mechanisms that underlie the onset, maintenance and control of electromechanical turbulence in the heart are inherently three-dimensional phenomena. However, it has not previously been possible to visualize the three-dimensional spatiotemporal dynamics of scroll waves inside cardiac tissues. Here we show that three-dimensional mechanical scroll waves and filament-like phase singularities can be observed deep inside the contracting heart wall using high-resolution four-dimensional ultrasound-based strain imaging. We found that mechanical phase singularities co-exist with electrical phase singularities during cardiac fibrillation. We investigated the dynamics of electrical and mechanical phase singularities by simultaneously measuring the membrane potential, intracellular calcium concentration and mechanical contractions of the heart. We show that cardiac fibrillation can be characterized using the three-dimensional spatiotemporal dynamics of mechanical phase singularities, which arise inside the fibrillating contracting ventricular wall. We demonstrate that electrical and mechanical phase singularities show complex interactions and we characterize their dynamics in terms of trajectories, topological charge and lifetime. We anticipate that our findings will provide novel perspectives for non-invasive diagnostic imaging and therapeutic applications.

Proposed imaging of the ultrafast electronic motion in samples using x-ray phase contrast.

PubMed

Dixit, Gopal; Slowik, Jan Malte; Santra, Robin

2013-03-29

Tracing the motion of electrons has enormous relevance to understanding ubiquitous phenomena in ultrafast science, such as the dynamical evolution of the electron density during complex chemical and biological processes. Scattering of ultrashort x-ray pulses from an electronic wave packet would appear to be the most obvious approach to image the electronic motion in real time and real space with the notion that such scattering patterns, in the far-field regime, encode the instantaneous electron density of the wave packet. However, recent results by Dixit et al. [Proc. Natl. Acad. Sci. U.S.A. 109, 11636 (2012)] have put this notion into question and have shown that the scattering in the far-field regime probes spatiotemporal density-density correlations. Here, we propose a possible way to image the instantaneous electron density of the wave packet via ultrafast x-ray phase contrast imaging. Moreover, we show that inelastic scattering processes, which plague ultrafast scattering in the far-field regime, do not contribute in ultrafast x-ray phase contrast imaging as a consequence of an interference effect. We illustrate our general findings by means of a wave packet that lies in the time and energy range of the dynamics of valence electrons in complex molecular and biological systems. This present work offers a potential to image not only instantaneous snapshots of nonstationary electron dynamics, but also the laplacian of these snapshots which provide information about the complex bonding and topology of the charge distributions in the systems.

Proposed Imaging of the Ultrafast Electronic Motion in Samples using X-Ray Phase Contrast

NASA Astrophysics Data System (ADS)

Dixit, Gopal; Slowik, Jan Malte; Santra, Robin

2013-03-01

Tracing the motion of electrons has enormous relevance to understanding ubiquitous phenomena in ultrafast science, such as the dynamical evolution of the electron density during complex chemical and biological processes. Scattering of ultrashort x-ray pulses from an electronic wave packet would appear to be the most obvious approach to image the electronic motion in real time and real space with the notion that such scattering patterns, in the far-field regime, encode the instantaneous electron density of the wave packet. However, recent results by Dixit et al. [Proc. Natl. Acad. Sci. U.S.A. 109, 11 636 (2012)] have put this notion into question and have shown that the scattering in the far-field regime probes spatiotemporal density-density correlations. Here, we propose a possible way to image the instantaneous electron density of the wave packet via ultrafast x-ray phase contrast imaging. Moreover, we show that inelastic scattering processes, which plague ultrafast scattering in the far-field regime, do not contribute in ultrafast x-ray phase contrast imaging as a consequence of an interference effect. We illustrate our general findings by means of a wave packet that lies in the time and energy range of the dynamics of valence electrons in complex molecular and biological systems. This present work offers a potential to image not only instantaneous snapshots of nonstationary electron dynamics, but also the Laplacian of these snapshots which provide information about the complex bonding and topology of the charge distributions in the systems.

Characterization of Electrocardiogram Changes Throughout a Marathon

PubMed Central

Callaway, Clifton; Salcido, David; McEntire, Serina; Roth, Ronald; Hostler, David

2014-01-01

Purpose There are few data examining cardiovascular physiology throughout a marathon. This study was devised to characterize electrocardiographic activity continuously throughout a marathon. Methods Cardiac activity was recorded from 19 subjects wearing a Holter monitor during a marathon. The 19 subjects (14 men and 5 women) were aged 39 ± 16 years (mean ± SD) and completed a marathon in 4:32:16 ± 1:23:35. Heart rate (HR), heart rate variability (HRV), T-wave amplitude, T-wave amplitude variability, and T-wave alternans (TWA) were evaluated continuously throughout the marathon. Results Averaged across all subjects, HRV, T-wave amplitude variability, and TWA increased throughout the marathon. Increased variability in T-wave amplitude occurred in 86% of subjects, characterized by complex oscillatory patterns and TWA. Three minutes after the marathon, HR was elevated and HRV was suppressed relative to the pre-marathon state. Conclusion HRV and T-wave amplitude variability, especially in the form of TWA, increase throughout a marathon. Increasing TWA as a marathon progresses likely represents a physiologic process as no arrhythmias or cardiac events were observed. PMID:24832192

Mobility of maerl-siliciclastic mixtures: Impact of waves, currents and storm events

NASA Astrophysics Data System (ADS)

Joshi, Siddhi; Duffy, Garret Patrick; Brown, Colin

2017-04-01

Maerl beds are free-living, non-geniculate coralline algae habitats which form biogenic reefs with high micro-scale complexity supporting a diversity and abundance of rare epifauna and epiflora. These habitats are highly mobile in shallow marine environments where substantial maerl beds co-exist with siliciclastic sediment, exemplified by our study site of Galway Bay. Coupled hydrodynamic-wave-sediment transport models have been used to explore the transport patterns of maerl-siliciclastic sediment during calm summer conditions and severe winter storms. The sediment distribution is strongly influenced by storm waves even in water depths greater than 100 m. Maerl is present at the periphery of wave-induced residual current gyres during storm conditions. A combined wave-current Sediment Mobility Index during storm conditions shows correlation with multibeam backscatter and surficial sediment distribution. A combined wave-current Mobilization Frequency Index during storm conditions acts as a physical surrogate for the presence of maerl-siliciclastic mixtures in Galway Bay. Both indices can provide useful integrated oceanographic and sediment information to complement coupled numerical hydrodynamic, sediment transport and erosion-deposition models.

An in silico framework to analyze the anisotropic shear wave mechanics in cardiac shear wave elastography

NASA Astrophysics Data System (ADS)

Caenen, Annette; Pernot, Mathieu; Peirlinck, Mathias; Mertens, Luc; Swillens, Abigail; Segers, Patrick

2018-04-01

Shear wave elastography (SWE) is a potential tool to non-invasively assess cardiac muscle stiffness. This study focused on the effect of the orthotropic material properties and mechanical loading on the performance of cardiac SWE, as it is known that these factors contribute to complex 3D anisotropic shear wave propagation. To investigate the specific impact of these complexities, we constructed a finite element model with an orthotropic material law subjected to different uniaxial stretches to simulate SWE in the stressed cardiac wall. Group and phase speed were analyzed in function of tissue thickness and virtual probe rotation angle. Tissue stretching increased the group and phase speed of the simulated shear wave, especially in the direction of the muscle fiber. As the model provided access to the true fiber orientation and material properties, we assessed the accuracy of two fiber orientation extraction methods based on SWE. We found a higher accuracy (but lower robustness) when extracting fiber orientations based on the location of maximal shear wave speed instead of the angle of the major axis of the ellipsoidal group speed surface. Both methods had a comparable performance for the center region of the cardiac wall, and performed less well towards the edges. Lastly, we also assessed the (theoretical) impact of pathology on shear wave physics and characterization in the model. It was found that SWE was able to detect changes in fiber orientation and material characteristics, potentially associated with cardiac pathologies such as myocardial fibrosis. Furthermore, the model showed clearly altered shear wave patterns for the fibrotic myocardium compared to the healthy myocardium, which forms an initial but promising outcome of this modeling study.

Oceanic forcing of coral reefs.

PubMed

Lowe, Ryan J; Falter, James L

2015-01-01

Although the oceans play a fundamental role in shaping the distribution and function of coral reefs worldwide, a modern understanding of the complex interactions between ocean and reef processes is still only emerging. These dynamics are especially challenging owing to both the broad range of spatial scales (less than a meter to hundreds of kilometers) and the complex physical and biological feedbacks involved. Here, we review recent advances in our understanding of these processes, ranging from the small-scale mechanics of flow around coral communities and their influence on nutrient exchange to larger, reef-scale patterns of wave- and tide-driven circulation and their effects on reef water quality and perceived rates of metabolism. We also examine regional-scale drivers of reefs such as coastal upwelling, internal waves, and extreme disturbances such as cyclones. Our goal is to show how a wide range of ocean-driven processes ultimately shape the growth and metabolism of coral reefs.

Electroencephalography in the Diagnosis of Genetic Generalized Epilepsy Syndromes

PubMed Central

Seneviratne, Udaya; Cook, Mark J.; D’Souza, Wendyl Jude

2017-01-01

Genetic generalized epilepsy (GGE) consists of several syndromes diagnosed and classified on the basis of clinical features and electroencephalographic (EEG) abnormalities. The main EEG feature of GGE is bilateral, synchronous, symmetric, and generalized spike-wave complex. Other classic EEG abnormalities are polyspikes, epileptiform K-complexes and sleep spindles, polyspike-wave discharges, occipital intermittent rhythmic delta activity, eye-closure sensitivity, fixation-off sensitivity, and photoparoxysmal response. However, admixed with typical changes, atypical epileptiform discharges are also commonly seen in GGE. There are circadian variations of generalized epileptiform discharges. Sleep, sleep deprivation, hyperventilation, intermittent photic stimulation, eye closure, and fixation-off are often used as activation techniques to increase the diagnostic yield of EEG recordings. Reflex seizure-related EEG abnormalities can be elicited by the use of triggers such as cognitive tasks and pattern stimulation during the EEG recording in selected patients. Distinct electrographic abnormalities to help classification can be identified among different electroclinical syndromes. PMID:28993753

Dentate network activity is necessary for spatial working memory by supporting CA3 sharp-wave ripple generation and prospective firing of CA3 neurons.

PubMed

Sasaki, Takuya; Piatti, Verónica C; Hwaun, Ernie; Ahmadi, Siavash; Lisman, John E; Leutgeb, Stefan; Leutgeb, Jill K

2018-02-01

Complex spatial working memory tasks have been shown to require both hippocampal sharp-wave ripple (SWR) activity and dentate gyrus (DG) neuronal activity. We therefore asked whether DG inputs to CA3 contribute to spatial working memory by promoting SWR generation. Recordings from DG and CA3 while rats performed a dentate-dependent working memory task on an eight-arm radial maze revealed that the activity of dentate neurons and the incidence rate of SWRs both increased during reward consumption. We then found reduced reward-related CA3 SWR generation without direct input from dentate granule neurons. Furthermore, CA3 cells with place fields in not-yet-visited arms preferentially fired during SWRs at reward locations, and these prospective CA3 firing patterns were more pronounced for correct trials and were dentate-dependent. These results indicate that coordination of CA3 neuronal activity patterns by DG is necessary for the generation of neuronal firing patterns that support goal-directed behavior and memory.

A mathematical model of the chevron-like wave pattern on a weld piece

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dowden, J.; Kapadia, P.

1996-12-31

In welding processes in general the surface of a metallic weld displays a chevron-like pattern. Such a pattern is also clearly seen to be present if welding is carried out using a laser beam. In the welding process a laser beam is directed normally on the metal undergoing translation and usually penetrates it to form a keyhole. The keyhole is surrounded by a molten region, the weld pool. Even if a CO{sub 2} laser is used, there are numerous fluctuations and instabilities that occur, so that the keyhole imposes forcing frequencies on the molten weld pool, additional to vibrations attendantmore » on the process of translation. The weld pool in turn responds by supporting a spectrum of waves of different frequencies involving the natural frequency of the weld pool as well as various forcing frequencies. These waves are surface tension-type capillary waves and previous publications have attempted to model their behavior mathematically, although not all aspects of the problem have always been included. The wave pattern that is manifested in the chevron-like pattern seen on the weld piece is, however, not necessarily identical to the wave pattern present in the weld pool. This is because the chevron-like wave pattern forms as a result of several complicating effects that arise as the weld specimen cools on its surface immediately after the weld has been formed. This process involves the waves on the surface of the weld pool freezing to form the chevron-like wave pattern. A feature that is often ignored is the fact that the waves on the weld pool can only be regarded as irrotational if the translation speed is sufficiently low. This paper describes mathematically the formation of the chevron-like wave pattern based on suitable simplifying assumptions to model the process. The mathematical description of the way in which this chevron-like pattern forms is a step toward a more comprehensive understanding of this process.« less

Dynamical Signatures of Living Systems

NASA Technical Reports Server (NTRS)

Zak, M.

1999-01-01

One of the main challenges in modeling living systems is to distinguish a random walk of physical origin (for instance, Brownian motions) from those of biological origin and that will constitute the starting point of the proposed approach. As conjectured, the biological random walk must be nonlinear. Indeed, any stochastic Markov process can be described by linear Fokker-Planck equation (or its discretized version), only that type of process has been observed in the inanimate world. However, all such processes always converge to a stable (ergodic or periodic) state, i.e., to the states of a lower complexity and high entropy. At the same time, the evolution of living systems directed toward a higher level of complexity if complexity is associated with a number of structural variations. The simplest way to mimic such a tendency is to incorporate a nonlinearity into the random walk; then the probability evolution will attain the features of diffusion equation: the formation and dissipation of shock waves initiated by small shallow wave disturbances. As a result, the evolution never "dies:" it produces new different configurations which are accompanied by an increase or decrease of entropy (the decrease takes place during formation of shock waves, the increase-during their dissipation). In other words, the evolution can be directed "against the second law of thermodynamics" by forming patterns outside of equilibrium in the probability space. Due to that, a specie is not locked up in a certain pattern of behavior: it still can perform a variety of motions, and only the statistics of these motions is constrained by this pattern. It should be emphasized that such a "twist" is based upon the concept of reflection, i.e., the existence of the self-image (adopted from psychology). The model consists of a generator of stochastic processes which represents the motor dynamics in the form of nonlinear random walks, and a simulator of the nonlinear version of the diffusion equation which represents the mental dynamics. It has been demonstrated that coupled mental-motor dynamics can simulate emerging self-organization, prey-predator games, collaboration and competition, "collective brain," etc.

Earthquake Source Parameters Inferred from T-Wave Observations

NASA Astrophysics Data System (ADS)

Perrot, J.; Dziak, R.; Lau, T. A.; Matsumoto, H.; Goslin, J.

2004-12-01

The seismicity of the North Atlantic Ocean has been recorded by two networks of autonomous hydrophones moored within the SOFAR channel on the flanks of the Mid-Atlantic Ridge (MAR). In February 1999, a consortium of U.S. investigators (NSF and NOAA) deployed a 6-element hydrophone array for long-term monitoring of MAR seismicity between 15o-35oN south of the Azores. In May 2002, an international collaboration of French, Portuguese, and U.S. researchers deployed a 6-element hydrophone array north of the Azores Plateau from 40o-50oN. The northern network (referred to as SIRENA) was recovered in September 2003. The low attenuation properties of the SOFAR channel for earthquake T-wave propagation results in a detection threshold reduction from a magnitude completeness level (Mc) of ˜ 4.7 for MAR events recorded by the land-based seismic networks to Mc=3.0 using hydrophone arrays. Detailed focal depth and mechanism information, however, remain elusive due to the complexities of seismo-acoustic propagation paths. Nonetheless, recent analyses (Dziak, 2001; Park and Odom, 2001) indicate fault parameter information is contained within the T-wave signal packet. We investigate this relationship further by comparing an earthquake's T-wave duration and acoustic energy to seismic magnitude (NEIC) and radiation pattern (for events M>5) from the Harvard moment-tensor catalog. First results show earthquake energy is well represented by the acoustic energy of the T-waves, however T-wave codas are significantly influenced by acoustic propagation effects and do not allow a direct determination of the seismic magnitude of the earthquakes. Second, there appears to be a correlation between T-wave acoustic energy, azimuth from earthquake source to the hydrophone, and the radiation pattern of the earthquake's SH waves. These preliminary results indicate there is a relationship between the T-wave observations and earthquake source parameters, allowing for additional insights into T-wave propagation.

Patterns of spiral wave attenuation by low-frequency periodic planar fronts

NASA Astrophysics Data System (ADS)

de la Casa, Miguel A.; de la Rubia, F. Javier; Ivanov, Plamen Ch.

2007-03-01

There is evidence that spiral waves and their breakup underlie mechanisms related to a wide spectrum of phenomena ranging from spatially extended chemical reactions to fatal cardiac arrhythmias [A. T. Winfree, The Geometry of Biological Time (Springer-Verlag, New York, 2001); J. Schutze, O. Steinbock, and S. C. Muller, Nature 356, 45 (1992); S. Sawai, P. A. Thomason, and E. C. Cox, Nature 433, 323 (2005); L. Glass and M. C. Mackey, From Clocks to Chaos: The Rhythms of Life (Princeton University Press, Princeton, 1988); R. A. Gray et al., Science 270, 1222 (1995); F. X. Witkowski et al., Nature 392, 78 (1998)]. Once initiated, spiral waves cannot be suppressed by periodic planar fronts, since the domains of the spiral waves grow at the expense of the fronts [A. N. Zaikin and A. M. Zhabotinsky, Nature 225, 535 (1970); A. T. Stamp, G. V. Osipov, and J. J. Collins, Chaos 12, 931 (2002); I. Aranson, H. Levine, and L. Tsimring, Phys. Rev. Lett. 76, 1170 (1996); K. J. Lee, Phys. Rev. Lett. 79, 2907 (1997); F. Xie, Z. Qu, J. N. Weiss, and A. Garfinkel, Phys. Rev. E 59, 2203 (1999)]. Here, we show that introducing periodic planar waves with long excitation duration and a period longer than the rotational period of the spiral can lead to spiral attenuation. The attenuation is not due to spiral drift and occurs periodically over cycles of several fronts, forming a variety of complex spatiotemporal patterns, which fall into two distinct general classes. Further, we find that these attenuation patterns only occur at specific phases of the descending fronts relative to the rotational phase of the spiral. We demonstrate these dynamics of phase-dependent spiral attenuation by performing numerical simulations of wave propagation in the excitable medium of myocardial cells. The effect of phase-dependent spiral attenuation we observe can lead to a general approach to spiral control in physical and biological systems with relevance for medical applications.

Deformation fabrics of natural blueschists and implications for seismic anisotropy in subducting oceanic crust

NASA Astrophysics Data System (ADS)

Kim, Daeyeong; Katayama, Ikuo; Michibayashi, Katsuyoshi; Tsujimori, Tatsuki

2013-09-01

Investigations of microstructures are crucial if we are to understand the seismic anisotropy of subducting oceanic crust, and here we report on our systematic fabric analyses of glaucophane, lawsonite, and epidote in naturally deformed blueschists from the Diablo Range and Franciscan Complex in California, and the Hida Mountains in Japan. Glaucophanes in the analyzed samples consist of very fine grains that are well aligned along the foliation and have high aspect ratios and strong crystal preferred orientations (CPOs) characterized by a (1 0 0)[0 0 1] pattern. These characteristics, together with a bimodal distribution of grain sizes from some samples, possibly indicate the occurrence of dynamic recrystallization for glaucophane. Although lawsonite and epidote display high aspect ratios and a strong CPO of (0 0 1)[0 1 0], the occurrence of straight grain boundaries and euhedral crystals indicates that rigid body rotation was the dominant deformation mechanism. The P-wave (AVP) and S-wave (AVS) seismic anisotropies of glaucophane (AVP = 20.4%, AVS = 11.5%) and epidote (AVP = 9.0%, AVS = 8.0%) are typical of the crust; consequently, the fastest propagation of P-waves is parallel to the [0 0 1] maxima, and the polarization of S-waves parallel to the foliation can form a trench-parallel seismic anisotropy owing to the slowest VS polarization being normal to the subducting slab. The seismic anisotropy of lawsonite (AVP = 9.6%, AVS = 19.9%) is characterized by the fast propagation of P-waves subnormal to the lawsonite [0 0 1] maxima and polarization of S-waves perpendicular to the foliation and lineation, which can generate a trench-normal anisotropy. The AVS of lawsonite blueschist (5.6-9.2%) is weak compared with that of epidote blueschist (8.4-11.1%). Calculations of the thickness of the anisotropic layer indicate that glaucophane and lawsonite contribute to the trench-parallel and trench-normal seismic anisotropy beneath NE Japan, but not to that beneath the Ryukyu arc. Our results demonstrate, therefore, that lawsonite has a strong influence on seismic velocities in the oceanic crust, and that lawsonite might be the cause of complex anisotropic patterns in subduction zones.

Two-dimensional wave patterns of spreading depolarization: Retracting, re-entrant, and stationary waves

NASA Astrophysics Data System (ADS)

Dahlem, Markus A.; Graf, Rudolf; Strong, Anthony J.; Dreier, Jens P.; Dahlem, Yuliya A.; Sieber, Michaela; Hanke, Wolfgang; Podoll, Klaus; Schöll, Eckehard

2010-06-01

We present spatio-temporal characteristics of spreading depolarizations (SD) in two experimental systems: retracting SD wave segments observed with intrinsic optical signals in chicken retina, and spontaneously occurring re-entrant SD waves that repeatedly spread across gyrencephalic feline cortex observed by laser speckle flowmetry. A mathematical framework of reaction-diffusion systems with augmented transmission capabilities is developed to explain the emergence and transitions between these patterns. Our prediction is that the observed patterns are reaction-diffusion patterns controlled and modulated by weak nonlocal coupling such as long-range, time-delayed, and global coupling. The described spatio-temporal characteristics of SD are of important clinical relevance under conditions of migraine and stroke. In stroke, the emergence of re-entrant SD waves is believed to worsen outcome. In migraine, retracting SD wave segments cause neurological symptoms and transitions to stationary SD wave patterns may cause persistent symptoms without evidence from noninvasive imaging of infarction.

Interactions of side (left and right ovary) with the number of follicles per ovary and with the intraovarian relationships between dominant follicle and corpus luteum in heifers.

PubMed

Ginther, O J; Hoffman, M M

2016-09-01

The interactions between side of ovary (left ovary [LO] and right ovary [RO]) and number of follicles per ovary and between side and intraovarian patterns were studied in heifers with two follicular waves (anovulatory wave 1 and ovulatory wave 2). Intraovarian patterns were on the basis of location of the dominant follicle (DF) and corpus luteum (CL) and were termed DF-CL, DF, CL, and devoid. The frequency of the DF-CL intraovarian pattern was greater for the RO than for the LO in wave 1 (80 of 121; P < 0.0004) and in wave 2 (54 of 83; P < 0.006). For each wave, the DF of the DF-CL and DF patterns was more often in the RO for the ipsilateral relationship (e.g., wave 1: 66% vs. 48%; P < 0.01) and in the LO for the contralateral relationship (52% vs. 34%; P < 0.01). An interaction between side and pattern (P < 0.05) for number of follicles in wave 2 that attained 6 mm was from a greater number in RO than in LO when a DF was present (DF-CL and DF patterns). An interaction of side and pattern for the number of wave 2 regressing subordinate follicles that recovered (increased in diameter) and became part of the subsequent wave 1 was greater (P < 0.05) for LO than for RO for the DF pattern but not for the CL pattern. An effect of side or an interaction that involved side was not found for the greater dimensions and blood flow for both the DF and CL of the DF-CL pattern. Results indicated that side interacted with ovarian pattern for number of DF-CL patterns, side of DF, number of follicles per ovary, and recovery of regressing wave 2 follicles. The hypothesis was supported that some aspects of follicle dynamics reflect an interaction of side and intraovarian pattern. Future studies on the effect of side on luteal or follicle dynamics could be incomplete or misleading if intraovarian patterns are ignored. Copyright © 2016 Elsevier Inc. All rights reserved.

Mesoscale Variability in SUCCESS Data

NASA Technical Reports Server (NTRS)

Eckermann, Stephen D.

1998-01-01

Analysis of meteorological, chemical, and microphysical data from the airborne SUCCESS mission is reported. Careful analysis of the complex DC-8 flight pattern of May 2, 1996 reveals 19 linear or nearly linear flight segments within six main geographical areas, which we have analyzed. Significant mountain wave activity is revealed in the data from the MMS and MTP instruments on the DC-8, which resembles previous observations of mountain wave structures near Boulder, CO. Strong mountain-wave-induced upwelling downwind of the Rockies is noted. Turbulence is also noted in regions of the mountain wave consistent with overturning near the tropopause. Zonal winds recorded on the ER-2 are shown to consistent with mountain wave breaking at or near critical levels in the stratosphere, consistent with the strong turbulence reported by the pilot during the ER-2 flight. Those observations have been supported with spectral analyses and modeling studies. "Postcasts" of mountain wave activity on May 2, 1996, using the Naval Research Laboratory Mountain Wave Forecast Model (NRL/MWFM) predicts both strong mountain wave activity near the tropopause (as measured by the DC-8) and strong mountain-wave-induced turbulence in the stratosphere (as encountered by the ER-2). Two-dimensional simulations of fluid flow over topography reveal similar isentropic structures to observations.

Diffusion, capture and recycling of SCAR/WAVE and Arp2/3 complexes observed in cells by single-molecule imaging.

PubMed

Millius, Arthur; Watanabe, Naoki; Weiner, Orion D

2012-03-01

The SCAR/WAVE complex drives lamellipodium formation by enhancing actin nucleation by the Arp2/3 complex. Phosphoinositides and Rac activate the SCAR/WAVE complex, but how SCAR/WAVE and Arp2/3 complexes converge at sites of nucleation is unknown. We analyzed the single-molecule dynamics of WAVE2 and p40 (subunits of the SCAR/WAVE and Arp2/3 complexes, respectively) in XTC cells. We observed lateral diffusion of both proteins and captured the transition of p40 from diffusion to network incorporation. These results suggest that a diffusive 2D search facilitates binding of the Arp2/3 complex to actin filaments necessary for nucleation. After nucleation, the Arp2/3 complex integrates into the actin network and undergoes retrograde flow, which results in its broad distribution throughout the lamellipodium. By contrast, the SCAR/WAVE complex is more restricted to the cell periphery. However, with single-molecule imaging, we also observed WAVE2 molecules undergoing retrograde motion. WAVE2 and p40 have nearly identical speeds, lifetimes and sites of network incorporation. Inhibition of actin retrograde flow does not prevent WAVE2 association and disassociation with the membrane but does inhibit WAVE2 removal from the actin cortex. Our results suggest that membrane binding and diffusion expedites the recruitment of nucleation factors to a nucleation site independent of actin assembly, but after network incorporation, ongoing actin polymerization facilitates recycling of SCAR/WAVE and Arp2/3 complexes.

Diffusion, capture and recycling of SCAR/WAVE and Arp2/3 complexes observed in cells by single-molecule imaging

PubMed Central

Millius, Arthur; Watanabe, Naoki; Weiner, Orion D.

2012-01-01

The SCAR/WAVE complex drives lamellipodium formation by enhancing actin nucleation by the Arp2/3 complex. Phosphoinositides and Rac activate the SCAR/WAVE complex, but how SCAR/WAVE and Arp2/3 complexes converge at sites of nucleation is unknown. We analyzed the single-molecule dynamics of WAVE2 and p40 (subunits of the SCAR/WAVE and Arp2/3 complexes, respectively) in XTC cells. We observed lateral diffusion of both proteins and captured the transition of p40 from diffusion to network incorporation. These results suggest that a diffusive 2D search facilitates binding of the Arp2/3 complex to actin filaments necessary for nucleation. After nucleation, the Arp2/3 complex integrates into the actin network and undergoes retrograde flow, which results in its broad distribution throughout the lamellipodium. By contrast, the SCAR/WAVE complex is more restricted to the cell periphery. However, with single-molecule imaging, we also observed WAVE2 molecules undergoing retrograde motion. WAVE2 and p40 have nearly identical speeds, lifetimes and sites of network incorporation. Inhibition of actin retrograde flow does not prevent WAVE2 association and disassociation with the membrane but does inhibit WAVE2 removal from the actin cortex. Our results suggest that membrane binding and diffusion expedites the recruitment of nucleation factors to a nucleation site independent of actin assembly, but after network incorporation, ongoing actin polymerization facilitates recycling of SCAR/WAVE and Arp2/3 complexes. PMID:22349699

Optimization of WAVE2 complex-induced actin polymerization by membrane-bound IRSp53, PIP(3), and Rac.

PubMed

Suetsugu, Shiro; Kurisu, Shusaku; Oikawa, Tsukasa; Yamazaki, Daisuke; Oda, Atsushi; Takenawa, Tadaomi

2006-05-22

WAVE2 activates the actin-related protein (Arp) 2/3 complex for Rac-induced actin polymerization during lamellipodium formation and exists as a large WAVE2 protein complex with Sra1/PIR121, Nap1, Abi1, and HSPC300. IRSp53 binds to both Rac and Cdc42 and is proposed to link Rac to WAVE2. We found that the knockdown of IRSp53 by RNA interference decreased lamellipodium formation without a decrease in the amount of WAVE2 complex. Localization of WAVE2 at the cell periphery was retained in IRSp53 knockdown cells. Moreover, activated Cdc42 but not Rac weakened the association between WAVE2 and IRSp53. When we measured Arp2/3 activation in vitro, the WAVE2 complex isolated from the membrane fraction of cells was fully active in an IRSp53-dependent manner but WAVE2 isolated from the cytosol was not. Purified WAVE2 and purified WAVE2 complex were activated by IRSp53 in a Rac-dependent manner with PIP(3)-containing liposomes. Therefore, IRSp53 optimizes the activity of the WAVE2 complex in the presence of activated Rac and PIP(3).

Parametrization study of the land multiparameter VTI elastic waveform inversion

NASA Astrophysics Data System (ADS)

He, W.; Plessix, R.-É.; Singh, S.

2018-06-01

Multiparameter inversion of seismic data remains challenging due to the trade-off between the different elastic parameters and the non-uniqueness of the solution. The sensitivity of the seismic data to a given subsurface elastic parameter depends on the source and receiver ray/wave path orientations at the subsurface point. In a high-frequency approximation, this is commonly analysed through the study of the radiation patterns that indicate the sensitivity of each parameter versus the incoming (from the source) and outgoing (to the receiver) angles. In practice, this means that the inversion result becomes sensitive to the choice of parametrization, notably because the null-space of the inversion depends on this choice. We can use a least-overlapping parametrization that minimizes the overlaps between the radiation patterns, in this case each parameter is only sensitive in a restricted angle domain, or an overlapping parametrization that contains a parameter sensitive to all angles, in this case overlaps between the radiation parameters occur. Considering a multiparameter inversion in an elastic vertically transverse isotropic medium and a complex land geological setting, we show that the inversion with the least-overlapping parametrization gives less satisfactory results than with the overlapping parametrization. The difficulties come from the complex wave paths that make difficult to predict the areas of sensitivity of each parameter. This shows that the parametrization choice should not only be based on the radiation pattern analysis but also on the angular coverage at each subsurface point that depends on geology and the acquisition layout.

Spin flip statistics and spin wave interference patterns in Ising ferromagnetic films: A Monte Carlo study.

PubMed

Acharyya, Muktish

2017-07-01

The spin wave interference is studied in two dimensional Ising ferromagnet driven by two coherent spherical magnetic field waves by Monte Carlo simulation. The spin waves are found to propagate and interfere according to the classic rule of interference pattern generated by two point sources. The interference pattern of spin wave is observed in one boundary of the lattice. The interference pattern is detected and studied by spin flip statistics at high and low temperatures. The destructive interference is manifested as the large number of spin flips and vice versa.

Electromagnetic Modeling of Human Body Using High Performance Computing

NASA Astrophysics Data System (ADS)

Ng, Cho-Kuen; Beall, Mark; Ge, Lixin; Kim, Sanghoek; Klaas, Ottmar; Poon, Ada

Realistic simulation of electromagnetic wave propagation in the actual human body can expedite the investigation of the phenomenon of harvesting implanted devices using wireless powering coupled from external sources. The parallel electromagnetics code suite ACE3P developed at SLAC National Accelerator Laboratory is based on the finite element method for high fidelity accelerator simulation, which can be enhanced to model electromagnetic wave propagation in the human body. Starting with a CAD model of a human phantom that is characterized by a number of tissues, a finite element mesh representing the complex geometries of the individual tissues is built for simulation. Employing an optimal power source with a specific pattern of field distribution, the propagation and focusing of electromagnetic waves in the phantom has been demonstrated. Substantial speedup of the simulation is achieved by using multiple compute cores on supercomputers.

Abi1 is essential for the formation and activation of a WAVE2 signalling complex.

PubMed

Innocenti, Metello; Zucconi, Adriana; Disanza, Andrea; Frittoli, Emanuela; Areces, Liliana B; Steffen, Anika; Stradal, Theresia E B; Di Fiore, Pier Paolo; Carlier, Marie-France; Scita, Giorgio

2004-04-01

WAVE2 belongs to a family of proteins that mediates actin reorganization by relaying signals from Rac to the Arp2/3 complex, resulting in lamellipodia protrusion. WAVE2 displays Arp2/3-dependent actin nucleation activity in vitro, and does not bind directly to Rac. Instead, it forms macromolecular complexes that have been reported to exert both positive and negative modes of regulation. How these complexes are assembled, localized and activated in vivo remains to be established. Here we use tandem mass spectrometry to identify an Abi1-based complex containing WAVE2, Nap1 (Nck-associated protein) and PIR121. Abi1 interacts directly with the WHD domain of WAVE2, increases WAVE2 actin polymerization activity and mediates the assembly of a WAVE2-Abi1-Nap1-PIR121 complex. The WAVE2-Abi1-Nap1-PIR121 complex is as active as the WAVE2-Abi1 sub-complex in stimulating Arp2/3, and after Rac activation it is re-localized to the leading edge of ruffles in vivo. Consistently, inhibition of Abi1 by RNA interference (RNAi) abrogates Rac-dependent lamellipodia protrusion. Thus, Abi1 orchestrates the proper assembly of the WAVE2 complex and mediates its activation at the leading edge in vivo.

Complex space monofilar approximation of diffraction currents on a conducting half plane

NASA Technical Reports Server (NTRS)

Lindell, I. V.

1987-01-01

Simple approximation of diffraction surface currents on a conducting half plane, due to an incoming plane wave, is obtained with a line current (monofile) in complex space. When compared to an approximating current at the edge, the diffraction pattern is seen to improve by an order of magnitude for a minimal increase of computation effort. Thus, the inconvient Fresnel integral functions can be avoided for quick calculations of diffracted fields and the accuracy is good in other directions than along the half plane. The method can be applied to general problems involving planar metal edges.

HOMER: the Holographic Optical Microscope for Education and Research

NASA Astrophysics Data System (ADS)

Luviano, Anali

Holography was invented in 1948 by Dennis Gabor and has undergone major advancements since the 2000s leading to the development of commercial digital holographic microscopes (DHM). This noninvasive form of microscopy produces a three-dimensional (3-D) digital model of a sample without altering or destroying the sample, thus allowing the same sample to be studied multiple times. HOMER-the Holographic Optical Microscope for Education and Research-produces a 3-D image from a two-dimensional (2-D) interference pattern captured by a camera that is then put through reconstruction software. This 2-D pattern is created when a reference wave interacts with the sample to produce a secondary wave that interferes with the unaltered part of the reference wave. I constructed HOMER to be an efficient, portable in-line DHM using inexpensive material and free reconstruction software. HOMER uses three different-colored LEDs as light sources. I am testing the performance of HOMER with the goal of producing tri-color images of samples. I'm using small basic biological samples to test the effectiveness of HOMER and plan to transition to complex cellular and biological specimens as I pursue my interest in biophysics. Norwich University.

Benchmark Modeling of the Near-Field and Far-Field Wave Effects of Wave Energy Arrays

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rhinefrank, Kenneth E; Haller, Merrick C; Ozkan-Haller, H Tuba

2013-01-26

This project is an industry-led partnership between Columbia Power Technologies and Oregon State University that will perform benchmark laboratory experiments and numerical modeling of the near-field and far-field impacts of wave scattering from an array of wave energy devices. These benchmark experimental observations will help to fill a gaping hole in our present knowledge of the near-field effects of multiple, floating wave energy converters and are a critical requirement for estimating the potential far-field environmental effects of wave energy arrays. The experiments will be performed at the Hinsdale Wave Research Laboratory (Oregon State University) and will utilize an array ofmore » newly developed Buoys' that are realistic, lab-scale floating power converters. The array of Buoys will be subjected to realistic, directional wave forcing (1:33 scale) that will approximate the expected conditions (waves and water depths) to be found off the Central Oregon Coast. Experimental observations will include comprehensive in-situ wave and current measurements as well as a suite of novel optical measurements. These new optical capabilities will include imaging of the 3D wave scattering using a binocular stereo camera system, as well as 3D device motion tracking using a newly acquired LED system. These observing systems will capture the 3D motion history of individual Buoys as well as resolve the 3D scattered wave field; thus resolving the constructive and destructive wave interference patterns produced by the array at high resolution. These data combined with the device motion tracking will provide necessary information for array design in order to balance array performance with the mitigation of far-field impacts. As a benchmark data set, these data will be an important resource for testing of models for wave/buoy interactions, buoy performance, and far-field effects on wave and current patterns due to the presence of arrays. Under the proposed project we will initiate high-resolution (fine scale, very near-field) fluid/structure interaction simulations of buoy motions, as well as array-scale, phase-resolving wave scattering simulations. These modeling efforts will utilize state-of-the-art research quality models, which have not yet been brought to bear on this complex problem of large array wave/structure interaction problem.« less

Superficial simplicity of the 2010 El Mayorg-Cucapah earthquake of Baja California in Mexico

USGS Publications Warehouse

Wei, S.; Fielding, E.; Leprince, S.; Sladen, A.; Avouac, J.-P.; Helmberger, D.; Hauksson, E.; Chu, R.; Simons, M.; Hudnut, K.; Herring, T.; Briggs, R.

2011-01-01

The geometry of faults is usually thought to be more complicated at the surface than at depth and to control the initiation, propagation and arrest of seismic ruptures1-6. The fault system that runs from southern California into Mexico is a simple strike-slip boundary: the west side of California and Mexico moves northwards with respect to the east. However, the Mw 7.2 2010 El Mayorg-Cucapah earthquake on this fault system produced a pattern of seismic waves that indicates a far more complex source than slip on a planar strike-slip fault. Here we use geodetic, remote-sensing and seismological data to reconstruct the fault geometry and history of slip during this earthquake. We find that the earthquake produced a straight 120-km-long fault trace that cut through the Cucapah mountain range and across the Colorado River delta. However, at depth, the fault is made up of two different segments connected by a small extensional fault. Both segments strike N130 ??E, but dip in opposite directions. The earthquake was initiated on the connecting extensional fault and 15s later ruptured the two main segments with dominantly strike-slip motion. We show that complexities in the fault geometry at depth explain well the complex pattern of radiated seismic waves. We conclude that the location and detailed characteristics of the earthquake could not have been anticipated on the basis of observations of surface geology alone. ?? 2011 Macmillan Publishers Limited. All rights reserved.

Direct-to-digital holography reduction of reference hologram noise and fourier space smearing

DOEpatents

Voelkl, Edgar

2006-06-27

Systems and methods are described for reduction of reference hologram noise and reduction of Fourier space smearing, especially in the context of direct-to-digital holography (off-axis interferometry). A method of reducing reference hologram noise includes: recording a plurality of reference holograms; processing the plurality of reference holograms into a corresponding plurality of reference image waves; and transforming the corresponding plurality of reference image waves into a reduced noise reference image wave. A method of reducing smearing in Fourier space includes: recording a plurality of reference holograms; processing the plurality of reference holograms into a corresponding plurality of reference complex image waves; transforming the corresponding plurality of reference image waves into a reduced noise reference complex image wave; recording a hologram of an object; processing the hologram of the object into an object complex image wave; and dividing the complex image wave of the object by the reduced noise reference complex image wave to obtain a reduced smearing object complex image wave.

Bound vector solitons and soliton complexes for the coupled nonlinear Schrödinger equations.

PubMed

Sun, Zhi-Yuan; Gao, Yi-Tian; Yu, Xin; Liu, Wen-Jun; Liu, Ying

2009-12-01

Dynamic features describing the collisions of the bound vector solitons and soliton complexes are investigated for the coupled nonlinear Schrödinger (CNLS) equations, which model the propagation of the multimode soliton pulses under some physical situations in nonlinear fiber optics. Equations of such type have also been seen in water waves and plasmas. By the appropriate choices of the arbitrary parameters for the multisoliton solutions derived through the Hirota bilinear method, the periodic structures along the propagation are classified according to the relative relations of the real wave numbers. Furthermore, parameters are shown to control the intensity distributions and interaction patterns for the bound vector solitons and soliton complexes. Transformations of the soliton types (shape changing with intensity redistribution) during the collisions of those stationary structures with the regular one soliton are discussed, in which a class of inelastic properties is involved. Discussions could be expected to be helpful in interpreting such structures in the multimode nonlinear fiber optics and equally applied to other systems governed by the CNLS equations, e.g., the plasma physics and Bose-Einstein condensates.

Thermospheric Extension of the Quasi 6-day Wave Observed by the TIMED Satellite

NASA Astrophysics Data System (ADS)

Gan, Q.; Oberheide, J.

2017-12-01

The quasi 6-day wave is one of the most prevailing planetary waves in the mesosphere and lower thermosphere (MLT) region. Its peak amplitude can attain 20-30 m/s in low-latitude zonal winds at around equinoxes. Consequently, it is anticipated that the 6-day wave can induce not only significantly dynamic effects (via wave-mean flow and wave-wave interactions) in the MLT, but also have significant impacts on the Thermosphere and Ionosphere (T-I). The understanding of the 6-day wave impact on the T-I system has been advanced a lot due to the recent development of whole atmosphere models and new satellite observations. Three pathways were widely proposed to explain the upward coupling due to the 6-day wave: E-region dynamo modulation, dissipation and nonlinear interaction with thermal tides. The current work aims to show a comprehensive pattern of the 6-day wave from the mesosphere up to the thermosphere/ionosphere in neutral fields (temperature, 3-D winds and density) and plasma drifts. To achieve this goal, we carry out the 6-day wave diagnostics by two different means. Firstly, the output of a one-year WACCM+DART run with data assimilation is analyzed to show the global structure of the 6-day wave in the MLT, followed by E-P flux diagnostics to elucidate the 6-day wave source and wave-mean flow interactions. Secondly, we produce observation-based 6-day wave patterns throughout the whole thermosphere by constraining modeled (TIME-GCM) 6-day wave patterns with observed 6-day wave patterns from SABER and TIDI in the MLT region. This allows us to fill the 110-400 km gap between remote sensing and in-situ satellites, and to obtain more realistic 6-day wave plasma drift patterns.

Splits or waves? Trees or webs? How divergence measures and network analysis can unravel language histories.

PubMed

Heggarty, Paul; Maguire, Warren; McMahon, April

2010-12-12

Linguists have traditionally represented patterns of divergence within a language family in terms of either a 'splits' model, corresponding to a branching family tree structure, or the wave model, resulting in a (dialect) continuum. Recent phylogenetic analyses, however, have tended to assume the former as a viable idealization also for the latter. But the contrast matters, for it typically reflects different processes in the real world: speaker populations either separated by migrations, or expanding over continuous territory. Since history often leaves a complex of both patterns within the same language family, ideally we need a single model to capture both, and tease apart the respective contributions of each. The 'network' type of phylogenetic method offers this, so we review recent applications to language data. Most have used lexical data, encoded as binary or multi-state characters. We look instead at continuous distance measures of divergence in phonetics. Our output networks combine branch- and continuum-like signals in ways that correspond well to known histories (illustrated for Germanic, and particularly English). We thus challenge the traditional insistence on shared innovations, setting out a new, principled explanation for why complex language histories can emerge correctly from distance measures, despite shared retentions and parallel innovations.

Splits or waves? Trees or webs? How divergence measures and network analysis can unravel language histories

PubMed Central

Heggarty, Paul; Maguire, Warren; McMahon, April

2010-01-01

Linguists have traditionally represented patterns of divergence within a language family in terms of either a ‘splits’ model, corresponding to a branching family tree structure, or the wave model, resulting in a (dialect) continuum. Recent phylogenetic analyses, however, have tended to assume the former as a viable idealization also for the latter. But the contrast matters, for it typically reflects different processes in the real world: speaker populations either separated by migrations, or expanding over continuous territory. Since history often leaves a complex of both patterns within the same language family, ideally we need a single model to capture both, and tease apart the respective contributions of each. The ‘network’ type of phylogenetic method offers this, so we review recent applications to language data. Most have used lexical data, encoded as binary or multi-state characters. We look instead at continuous distance measures of divergence in phonetics. Our output networks combine branch- and continuum-like signals in ways that correspond well to known histories (illustrated for Germanic, and particularly English). We thus challenge the traditional insistence on shared innovations, setting out a new, principled explanation for why complex language histories can emerge correctly from distance measures, despite shared retentions and parallel innovations. PMID:21041208

Lommel modes

NASA Astrophysics Data System (ADS)

Kovalev, Alexey A.; Kotlyar, Victor V.

2015-03-01

We study a non-paraxial family of nondiffracting laser beams whose complex amplitude is proportional to an n-th order Lommel function of two variables. These beams are referred to as Lommel modes. Explicit analytical relations for the angular spectrum of plane waves and orbital angular momentum of the Lommel beams have been derived. The even (n=2p) and odd (n=2p+1) Lommel modes are mutually orthogonal, as are the Lommel modes characterized by different projections of the wave vector on the optical axis. At a definite parameter, the Lommel modes change to conventional Bessel beams. Asymmetry of the Lommel modes depends on a complex parameter с, with its modulus in the polar notation defining the intensity pattern in the beam‧s cross-section and the argument defining the angle of rotation of the intensity pattern about the optical axis. If the parameter с is real or purely imaginary, the transverse intensity component of the Lommel modes is specularly symmetric about the Cartesian coordinate axes. Besides, with the modulus of the с parameter increasing from 0 to 1, the orbital angular momentum of the Lommel modes increases from a finite value proportional to the topological charge n to infinity. The orbital angular momentum of the Lommel modes undergoes continuous variations, in contrast to its discrete changes in the Bessel modes.

Rotating spiral waves in fertilized ascidian eggs.

PubMed

Ballarò, Benedetto; Reas, Pier Giorgio

2002-01-01

Excitable systems modelled by reaction-diffusion equation may be expected to produce quite complex spatial patterns. Winfree [1974] demonstrated experimentally, in the Belousov-Zhabotinskii reaction, the existence of particular waves called rotating spiral waves. Later Keener and Tyson [1986] presented a thorough analysis of these waves in excitable systems. Spiral waves can also be observed in brain tissue (Shibata and Bures [1974]), while it seems that the precursor to cardiac fibrillation is the appearance of rotating waves of electrical impulses (Winfree [1983]). In this work we suppose the appearance of Ca++ spiral waves in the vegetal pole of ascidian egg cells after the first ooplasmic segregation. Previously we observed that (Ballarò and Reas [2000a]), when the myoplasm is completely localized in the vegetal region (excitable stage) and the ascidian egg cell is perturbed by an increase of Ca++ concentration in the culture medium, the cell reacts by showing persistent mechanical waves of contraction which exist as long as the cell is perturbed. Experimentally we observed the production of a polar lobe located in the vegetal region and the change of the inclination of mitotic furrow, after the appearance of a myoplasmic spiral wave in the vegetal pole. So we suppose that the myoplasmic spiral wave is due to a Ca++ spiral wave, and the myoplasmic spiral wave then causes the changes in the shape of the cell (polar lobe, inclination of mitotic furrow, etc.). Moreover we give a simple geometrical description of a spiral wave.

Possible disruption of remote viewing by complex weak magnetic fields around the stimulus site and the possibility of accessing real phase space: a pilot study.

PubMed

Koren, S A; Persinger, M A

2002-12-01

In 2002 Persinger, Roll, Tiller, Koren, and Cook considered whether there are physical processes by which recondite information exists within the space and time of objects or events. The stimuli that compose this information might be directly detected within the whole brain without being processed by the typical sensory modalities. We tested the artist Ingo Swann who can reliably draw and describe randomly selected photographs sealed in envelopes in another room. In the present experiment the photographs were immersed continuously in repeated presentations (5 times per sec.) of one of two types of computer-generated complex magnetic field patterns whose intensities were less than 20 nT over most of the area. WINDOWS-generated but not DOS-generated patterns were associated with a marked decrease in Mr. Swann's accuracy. Whereas the DOS software generated exactly the same pattern, WINDOWS software phase-modulated the actual wave form resulting in an infinite bandwidth and complexity. We suggest that information obtained by processes attributed to "paranormal" phenomena have physical correlates that can be masked by weak, infinitely variable magnetic fields.

Complex earthquake rupture and local tsunamis

USGS Publications Warehouse

Geist, E.L.

2002-01-01

In contrast to far-field tsunami amplitudes that are fairly well predicted by the seismic moment of subduction zone earthquakes, there exists significant variation in the scaling of local tsunami amplitude with respect to seismic moment. From a global catalog of tsunami runup observations this variability is greatest for the most frequently occuring tsunamigenic subduction zone earthquakes in the magnitude range of 7 < Mw < 8.5. Variability in local tsunami runup scaling can be ascribed to tsunami source parameters that are independent of seismic moment: variations in the water depth in the source region, the combination of higher slip and lower shear modulus at shallow depth, and rupture complexity in the form of heterogeneous slip distribution patterns. The focus of this study is on the effect that rupture complexity has on the local tsunami wave field. A wide range of slip distribution patterns are generated using a stochastic, self-affine source model that is consistent with the falloff of far-field seismic displacement spectra at high frequencies. The synthetic slip distributions generated by the stochastic source model are discretized and the vertical displacement fields from point source elastic dislocation expressions are superimposed to compute the coseismic vertical displacement field. For shallow subduction zone earthquakes it is demonstrated that self-affine irregularities of the slip distribution result in significant variations in local tsunami amplitude. The effects of rupture complexity are less pronounced for earthquakes at greater depth or along faults with steep dip angles. For a test region along the Pacific coast of central Mexico, peak nearshore tsunami amplitude is calculated for a large number (N = 100) of synthetic slip distribution patterns, all with identical seismic moment (Mw = 8.1). Analysis of the results indicates that for earthquakes of a fixed location, geometry, and seismic moment, peak nearshore tsunami amplitude can vary by a factor of 3 or more. These results indicate that there is substantially more variation in the local tsunami wave field derived from the inherent complexity subduction zone earthquakes than predicted by a simple elastic dislocation model. Probabilistic methods that take into account variability in earthquake rupture processes are likely to yield more accurate assessments of tsunami hazards.

The picosecond structure of ultra-fast rogue waves

NASA Astrophysics Data System (ADS)

Klein, Avi; Shahal, Shir; Masri, Gilad; Duadi, Hamootal; Sulimani, Kfir; Lib, Ohad; Steinberg, Hadar; Kolpakov, Stanislav A.; Fridman, Moti

2018-02-01

We investigated ultrafast rogue waves in fiber lasers and found three different patterns of rogue waves: single- peaks, twin-peaks, and triple-peaks. The statistics of the different patterns as a function of the pump power of the laser reveals that the probability for all rogue waves patterns increase close to the laser threshold. We developed a numerical model which prove that the ultrafast rogue waves patterns result from both the polarization mode dispersion in the fiber and the non-instantaneous nature of the saturable absorber. This discovery reveals that there are three different types of rogue waves in fiber lasers: slow, fast, and ultrafast, which relate to three different time-scales and are governed by three different sets of equations: the laser rate equations, the nonlinear Schrodinger equation, and the saturable absorber equations, accordingly. This discovery is highly important for analyzing rogue waves and other extreme events in fiber lasers and can lead to realizing types of rogue waves which were not possible so far such as triangular rogue waves.

Sand-wave movement on Little Georges Bank

USGS Publications Warehouse

Twichell, David C.

1983-01-01

A 1-x-1.5-km area on Little Georges Bank (centered at 41?08?N., 68?04?W.) was mapped three times during a ten-month period by sidescan sonar and echo-sounding techniques to assess the morphology and mobility of sand waves on Georges Bank. Sand-wave amplitudes in the survey area ranged from 1-11 m although most were 5-7 m. Wavelengths were not constant as the crests were sinuous and in places, even bifurcated. The sand waves are asymmetrical with their steepest sides facing northwest; however, gradients of their steep sides mostly are 4?-10? which is well below the angle of repose for sand in water. Sand waves tended to have greater relief and a sharper asymmetry during the survey in September than during those in June or April. During the survey period the sand waves moved but the direction and rate of motion was variable. Even along an individual sand wave some parts moved as much as 60 m between surveys while other parts apparently remained stationary. The sand waves were asymmetrical, but movement was not consistently in the direction that the steep sides faced. Along the same sand wave, parts moved to the northwest while other parts moved to the southeast. Despite the complex pattern of sand motion, the mean displacement of the sand waves was below the resolution of the survey technique; to resolve it, a longer survey is needed.

Complex deformation in western Tibet revealed by anisotropic tomography

NASA Astrophysics Data System (ADS)

Zhang, Heng; Zhao, Junmeng; Zhao, Dapeng; Yu, Chunquan; Liu, Hongbing; Hu, Zhaoguo

2016-10-01

The mechanism and pattern of deformation beneath western Tibet are still an issue of debate. In this work we present 3-D P- and S-wave velocity tomography as well as P-wave radial and azimuthal anisotropy along the ANTILOPE-I profile and surrounding areas in western Tibet, which are determined by using a large number of P and S arrival-time data of local earthquakes and teleseismic events. Our results show that low-velocity (low-V) zones exist widely in the middle crust, whereas low-V zones are only visible in the lower crust beneath northwestern Tibet, indicating the existence of significant heterogeneities and complex flow there. In the upper mantle, a distinct low-V gap exists between the Indian and Asian plates. Considering the P- and S-wave tomography and P-wave azimuthal and radial anisotropy results, we interpret the gap to be caused mainly by shear heating. Depth-independent azimuthal anisotropy and high-velocity zones exist beneath the northern part of the study region, suggesting a vertically coherent deformation beneath the Tarim Basin. In contrast, tomographic and anisotropic features change with depth beneath the central and southern parts of the study region, which reflects depth-dependent (or decoupled) deformations there. At the northern edge of the Indian lithospheric mantle (ILM), P-wave azimuthal anisotropy shows a nearly east-west fast-velocity direction, suggesting that the ILM was re-built by mantle materials flowing to the north.

The effect of traveling wave shapes in the maneuver control and efficiency of an underwater robot propelled by an undulating fin

NASA Astrophysics Data System (ADS)

Liu, Hanlin; Curet, Oscar

2016-11-01

Effective control of propulsive undulating fins has the potential to enhance the maneuverability and efficiency of underwater vehicles allowing them to navigate in more complex environments. Aquatic animals using this type of propulsion are able to perform complex maneuvers by sending different traveling waves along one or multiple elongated fins. Recent work has investigated the propulsive forces, the hydrodynamics and the efficiency of an undulating ribbon fin. However, it is still not understood how different traveling wave shapes along the fin can be used to control the hydrodynamic forces and torques to perform different maneuvers. In this work, we study the effect of traveling wave shapes on the hydrodynamic forces and torques, swimming speed, maneuver control and propulsive performance of an underwater vehicle propelled by an undulating fin. The underwater robot propels by actuating a fin that is composed of sixteen independent rays interconnected with a flexible membrane. The hull contains all the electronics, batteries, motors and sensors. The underwater vehicle was tested in a water tank-flume facility. In a series of experiments, we measured the motion of the vessel and the power consumption for different traveling wave patterns. In addition, we measured the flow around the fin using Particle Image Velocimetry. We present the results concerning the power distribution along the fin, propulsive efficiency, free-swimming speed and pitch control based on different fin kinematics. National Science Foundation under Grant No. 1420774.

Experimental investigation of door dynamic opening caused by impinging shock wave

NASA Astrophysics Data System (ADS)

Biamino, L.; Jourdan, G.; Mariani, C.; Igra, O.; Massol, A.; Houas, L.

2011-02-01

To prevent damage caused by accidental overpressure inside a closed duct (e.g. jet engine) safety valves are introduced. The present study experimentally investigates the dynamic opening of such valves by employing a door at the end of a shock tube driven section. The door is hung on an axis and is free to rotate, thereby opening the tube. The evolved flow and wave pattern due to a collision of an incident shock wave with the door, causing the door opening, is studied by employing a high speed schlieren system and recording pressures at different places inside the tube as well as on the rotating door. Analyzing this data sheds light on the air flow evolution and the behavior of the opening door. In the present work, emphasis is given to understanding the complex, unsteady flow developed behind the transmitted shock wave as it diffracts over the opening door. It is shown that both the door inertia and the shock wave strength influence the opening dynamic evolution, but not in the proportions that might be expected.

Evidence for {100}<011> slip in ferropericlase in Earth's lower mantle from high-pressure/high-temperature experiments

NASA Astrophysics Data System (ADS)

Immoor, J.; Marquardt, H.; Miyagi, L.; Lin, F.; Speziale, S.; Merkel, S.; Buchen, J.; Kurnosov, A.; Liermann, H.-P.

2018-05-01

Seismic anisotropy in Earth's lowermost mantle, resulting from Crystallographic Preferred Orientation (CPO) of elastically anisotropic minerals, is among the most promising observables to map mantle flow patterns. A quantitative interpretation, however, is hampered by the limited understanding of CPO development in lower mantle minerals at simultaneously high pressures and temperatures. Here, we experimentally determine CPO formation in ferropericlase, one of the elastically most anisotropic deep mantle phases, at pressures of the lower mantle and temperatures of up to 1400 K using a novel experimental setup. Our data reveal a significant contribution of slip on {100} to ferropericlase CPO in the deep lower mantle, contradicting previous inferences based on experimental work at lower mantle pressures but room temperature. We use our results along with a geodynamic model to show that deformed ferropericlase produces strong shear wave anisotropy in the lowermost mantle, where horizontally polarized shear waves are faster than vertically polarized shear waves, consistent with seismic observations. We find that ferropericlase alone can produce the observed seismic shear wave splitting in D″ in regions of downwelling, which may be further enhanced by post-perovskite. Our model further shows that the interplay between ferropericlase (causing VSH > VSV) and bridgmanite (causing VSV > VSH) CPO can produce a more complex anisotropy patterns as observed in regions of upwelling at the margin of the African Large Low Shear Velocity Province.

Seismic noise frequency dependent P and S wave sources

NASA Astrophysics Data System (ADS)

Stutzmann, E.; Schimmel, M.; Gualtieri, L.; Farra, V.; Ardhuin, F.

2013-12-01

Seismic noise in the period band 3-10 sec is generated in the oceans by the interaction of ocean waves. Noise signal is dominated by Rayleigh waves but body waves can be extracted using a beamforming approach. We select the TAPAS array deployed in South Spain between June 2008 and September 2009 and we use the vertical and horizontal components to extract noise P and S waves, respectively. Data are filtered in narrow frequency bands and we select beam azimuths and slownesses that correspond to the largest continuous sources per day. Our procedure automatically discard earthquakes which are localized during short time durations. Using this approach, we detect many more noise P-waves than S-waves. Source locations are determined by back-projecting the detected slowness/azimuth. P and S waves are generated in nearby areas and both source locations are frequency dependent. Long period sources are dominantly in the South Atlantic and Indian Ocean whereas shorter period sources are rather in the North Atlantic Ocean. We further show that the detected S-waves are dominantly Sv-waves. We model the observed body waves using an ocean wave model that takes into account all possible wave interactions including coastal reflection. We use the wave model to separate direct and multiply reflected phases for P and S waves respectively. We show that in the South Atlantic the complex source pattern can be explained by the existence of both coastal and pelagic sources whereas in the North Atlantic most body wave sources are pelagic. For each detected source, we determine the equivalent source magnitude which is compared to the model.

Optimization of WAVE2 complex–induced actin polymerization by membrane-bound IRSp53, PIP3, and Rac

PubMed Central

Suetsugu, Shiro; Kurisu, Shusaku; Oikawa, Tsukasa; Yamazaki, Daisuke; Oda, Atsushi; Takenawa, Tadaomi

2006-01-01

WAVE2 activates the actin-related protein (Arp) 2/3 complex for Rac-induced actin polymerization during lamellipodium formation and exists as a large WAVE2 protein complex with Sra1/PIR121, Nap1, Abi1, and HSPC300. IRSp53 binds to both Rac and Cdc42 and is proposed to link Rac to WAVE2. We found that the knockdown of IRSp53 by RNA interference decreased lamellipodium formation without a decrease in the amount of WAVE2 complex. Localization of WAVE2 at the cell periphery was retained in IRSp53 knockdown cells. Moreover, activated Cdc42 but not Rac weakened the association between WAVE2 and IRSp53. When we measured Arp2/3 activation in vitro, the WAVE2 complex isolated from the membrane fraction of cells was fully active in an IRSp53-dependent manner but WAVE2 isolated from the cytosol was not. Purified WAVE2 and purified WAVE2 complex were activated by IRSp53 in a Rac-dependent manner with PIP3-containing liposomes. Therefore, IRSp53 optimizes the activity of the WAVE2 complex in the presence of activated Rac and PIP3. PMID:16702231

Phase Imaging: A Compressive Sensing Approach

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schneider, Sebastian; Stevens, Andrew; Browning, Nigel D.

Since Wolfgang Pauli posed the question in 1933, whether the probability densities |Ψ(r)|² (real-space image) and |Ψ(q)|² (reciprocal space image) uniquely determine the wave function Ψ(r) [1], the so called Pauli Problem sparked numerous methods in all fields of microscopy [2, 3]. Reconstructing the complete wave function Ψ(r) = a(r)e-iφ(r) with the amplitude a(r) and the phase φ(r) from the recorded intensity enables the possibility to directly study the electric and magnetic properties of the sample through the phase. In transmission electron microscopy (TEM), electron holography is by far the most established method for phase reconstruction [4]. Requiring a highmore » stability of the microscope, next to the installation of a biprism in the TEM, holography cannot be applied to any microscope straightforwardly. Recently, a phase retrieval approach was proposed using conventional TEM electron diffractive imaging (EDI). Using the SAD aperture as reciprocal-space constraint, a localized sample structure can be reconstructed from its diffraction pattern and a real-space image using the hybrid input-output algorithm [5]. We present an alternative approach using compressive phase-retrieval [6]. Our approach does not require a real-space image. Instead, random complimentary pairs of checkerboard masks are cut into a 200 nm Pt foil covering a conventional TEM aperture (cf. Figure 1). Used as SAD aperture, subsequently diffraction patterns are recorded from the same sample area. Hereby every mask blocks different parts of gold particles on a carbon support (cf. Figure 2). The compressive sensing problem has the following formulation. First, we note that the complex-valued reciprocal-space wave-function is the Fourier transform of the (also complex-valued) real-space wave-function, Ψ(q) = F[Ψ(r)], and subsequently the diffraction pattern image is given by |Ψ(q)|2 = |F[Ψ(r)]|2. We want to find Ψ(r) given a few differently coded diffraction pattern measurements yn = |F[HnΨ(r)]|2, where the matrices Hn encode the mask structure of the aperture. This is a nonlinear inverse problem, but has been shown to be solvable even in the underdetermined case [6]. Since each diffraction pattern yn contains diffraction information from selected regions of the same sample, the differences in each pattern contain local phase information, which can be combined to form a full estimate of the real-space wave-function[7]. References: [1] W. Pauli in “Die allgemeinen Prinzipien der Wellenmechanik“, ed. H Geiger and W Scheel, (Julius Springer, Berlin). [2] A. Tonomura, Rev. Mod. Phys. 59 (1987), p. 639. [3] J. Miao et al, Nature 400 (1999), p. 342. [4] H. Lichte et al, Annu. Rev. Mater. Res. 37 (2007), p. 539. [5] J. Yamasaki et al, Appl. Phys. Lett. 101 (2012), 234105. [6] P Schniter and S Rangan. Signal Proc., IEEE Trans. on. 64(4), (2015), pp. 1043. [7] Supported by the Chemical Imaging, Signature Discovery, and Analytics in Motion initiatives at PNNL. PNNL is operated by Battelle Memorial Inst. for the US DOE; contract DE-AC05-76RL01830.« less

Disrupting neural activity related to awake-state sharp wave-ripple complexes prevents hippocampal learning.

PubMed

Nokia, Miriam S; Mikkonen, Jarno E; Penttonen, Markku; Wikgren, Jan

2012-01-01

Oscillations in hippocampal local-field potentials (LFPs) reflect the crucial involvement of the hippocampus in memory trace formation: theta (4-8 Hz) oscillations and ripples (~200 Hz) occurring during sharp waves are thought to mediate encoding and consolidation, respectively. During sharp wave-ripple complexes (SPW-Rs), hippocampal cell firing closely follows the pattern that took place during the initial experience, most likely reflecting replay of that event. Disrupting hippocampal ripples using electrical stimulation either during training in awake animals or during sleep after training retards spatial learning. Here, adult rabbits were trained in trace eyeblink conditioning, a hippocampus-dependent associative learning task. A bright light was presented to the animals during the inter-trial interval (ITI), when awake, either during SPW-Rs or irrespective of their neural state. Learning was particularly poor when the light was presented following SPW-Rs. While the light did not disrupt the ripple itself, it elicited a theta-band oscillation, a state that does not usually coincide with SPW-Rs. Thus, it seems that consolidation depends on neuronal activity within and beyond the hippocampus taking place immediately after, but by no means limited to, hippocampal SPW-Rs.

Are snakes particles or waves? Scattering of a limbless locomotor through a single slit

NASA Astrophysics Data System (ADS)

Qian, Feifei; Dai, Jin; Gong, Chaohui; Choset, Howie; Goldman, Daniel

Droplets on vertically vibrated fluid surfaces can walk and diffract through a single slit by a pilot wave hydrodynamic interaction [Couder, 2006; Bush, 2015]. Inspired by the correspondence between emergent macroscale dynamics and phenomena in quantum systems, we tested if robotic snakes, which resemble wave packets, behave emergently like particles or waves when interacting with an obstacle. In lab experiments and numerical simulations we measured how a multi-module snake-like robot swam through a single slit. We controlled the snake undulation gait as a fixed serpenoid traveling wave pattern with varying amplitude and initial phase, and we examined the snake trajectory as it swam through a slit with width d. Robot trajectories were straight before interaction with the slit, then exited at different scattering angle θ after the interaction due to a complex interaction of the body wave with the slit. For fixed amplitude and large d, the snake passed through the slit with minimal interaction and theta was ~ 0 . For sufficiently small d, θ was finite and bimodally distributed, depending on the initial phase. For intermediate d, θ was sensitive to initial phase, and the width of the distribution of θ increased with decreasing d.

Sedimentation Waves on the Martian North Polar Cap: Analogy with Megadunes in Antarctica

NASA Astrophysics Data System (ADS)

Herny, C.; Masse, M.; Bourgeois, O.; Carpy, S.; Le Mouelic, S.; Appéré, T.; Smith, I. B.; Spiga, A.; Perret, L.; Rodriguez, S.; Piquet, T.; Gaudin, D.; Le Menn, E.

2014-12-01

Complex feedbacks between katabatic winds and the cryosphere may lead to the development of sedimentation waves at the surface of ice sheets. These have been first described and named megadunes in Antarctica. Here we use topographic data, optical images, spectroscopic data and radar soundings, acquired by Mars orbiters, to show that the surface of the Martian North Polar Cap displays two superimposed sets of sedimentation waves with differing wavelengths. These sedimentation waves grow and migrate upwind in response to the development of periodic accumulation/ablation patterns controlled by katabatic winds. They have similarities with Antarctic megadunes regarding their surface morphology, texture, grain size, and internal stratigraphic architecture. Based on this analogy, we are currently developing a model of ice/wind interaction at the surface of ice sheets. In Antarctica the accumulation processes on megadunes fields is generally attributed to the wind-blown snow transport while on sedimentation waves of the North Polar Cap of Mars the accumulation seems to be dominated by sublimation/condensation processes at the surface. The model is designed to explore the implication of the water vapor mass transfer and heat transfer on the development of sedimentation waves both on Mars and Earth.

Seismic studies in the southern Puna plateau and the Peruvian Andes

NASA Astrophysics Data System (ADS)

Calixto Mory, Frank Jimmy

I present three studies in two regions, both within the Central Andes. In both regions it is clear that there are significant variations in the subduction geometry. I have used surface wave tomography to investigate the shear wave velocity structure beneath the southern Puna plateau and found evidence of widespread melting of the crust beneath the high elevations which correlates with a gap in intermediate depth seismicity and the recent eruptions of ignimbrite complexes. All of these observations can be explained by the delamination of the lithospheric mantle beneath it. I measured Rayleigh wave phase velocities as a function of frequency and inverted then to obtain shear wave velocities as a function of depth. The results show a high velocity body sitting above the subducting Nazca plate beneath the northern edge of the Cerro Galan ignimbrite. This high velocity body is interpreted to be the delaminated piece of lithosphere that detached and sank leading to a localized upwelling of asthenosphere that, in turn, caused widespread crustal melting leading to the eruption of the most recent ignimbrite complexes. Furthermore it is possible that this upwelling also thermally eroded the slab in this region. It is apparent that there is a significant slab gap or hole where there are very few intermediate depth earthquakes. In addition, I have used shear wave splitting analysis and shear wave splitting tomography in the southern Puna plateau to investigate the patterns of seismic anisotropy and mantle flow. The results show very complex shear wave splitting and seismic anisotropy patterns throughout the southern Puna plateau. The observations suggest that different mechanisms are driving the mantle flow from region to region. The subslab mantle outside the region where delamination took place is mostly driven by slab roll back and small degree of coupling between the subducting slab and the mantle below it. In the region apparently dominated by delamination, the subslab mantle outlines a rotation pattern of a-axis and small strength of anisotropy, suggesting that a slab gap or heated slab is regionally driving the mantle flow. In the mantle wedge, there is evidence for vertical a-axis suggesting vertical flow. This is observed beneath the main ignimbrite complexes and above the delaminated block imaged in the first study. Anisotropy in the western edge of the region above the slab is driven by compression of the South American lithosphere, which leads to trench parallel a-axis orientation. Finally, I have studied the attenuation of high frequency seismic waves in Southern Peru using the two-station and reverse two station methods. I have focused on the largest regional phase Lg which is a wave that is entirely guided in the crust and travels mostly as an S-wave. This study allowed me to investigate the correlation of attenuation measurements with topography and regions of high heat flow. Furthermore, this study is important as it can be used to distinguish regions with higher seismic hazard from distance earthquakes. Low attenuation, or high quality factor (Q), usually leads to high stronger ground shaking even at larger distances from the epicenter. Our attenuation model should determine whether the attenuation is intrinsic or cause by scattering. The western cordillera in northern Peru is characterized by high attenuation. I have also found that most regions with high attenuation (low LgQ) in southern Peru correlated very well with location of volcanoes. However, we have also found regions with high attenuation where there is very little active volcanism. We believe the high level of attenuation is associated with scattering attenuation caused by a thick crustal root. The Altiplano plateau, where Lake Titicaca is located, shows intermediate values of attenuation. The city of Pisco shows the highest values of Q in Peru (˜1500) associated with a high degree of site effect which makes this region potentially more susceptible to strong ground motion from regional earthquakes. Most of southern Peru tends to exhibit high intrinsic attenuation but scattering attenuation is also observed to dominate in regions where the topography changes drastically over small distances such as the northern edge of the Altiplano plateau.

Identification of Inhibitory Premotor Interneurons Activated at a Late Phase in a Motor Cycle during Drosophila Larval Locomotion

PubMed Central

Itakura, Yuki; Kohsaka, Hiroshi; Ohyama, Tomoko; Zlatic, Marta

2015-01-01

Rhythmic motor patterns underlying many types of locomotion are thought to be produced by central pattern generators (CPGs). Our knowledge of how CPG networks generate motor patterns in complex nervous systems remains incomplete, despite decades of work in a variety of model organisms. Substrate borne locomotion in Drosophila larvae is driven by waves of muscular contraction that propagate through multiple body segments. We use the motor circuitry underlying crawling in larval Drosophila as a model to try to understand how segmentally coordinated rhythmic motor patterns are generated. Whereas muscles, motoneurons and sensory neurons have been well investigated in this system, far less is known about the identities and function of interneurons. Our recent study identified a class of glutamatergic premotor interneurons, PMSIs (period-positive median segmental interneurons), that regulate the speed of locomotion. Here, we report on the identification of a distinct class of glutamatergic premotor interneurons called Glutamatergic Ventro-Lateral Interneurons (GVLIs). We used calcium imaging to search for interneurons that show rhythmic activity and identified GVLIs as interneurons showing wave-like activity during peristalsis. Paired GVLIs were present in each abdominal segment A1-A7 and locally extended an axon towards a dorsal neuropile region, where they formed GRASP-positive putative synaptic contacts with motoneurons. The interneurons expressed vesicular glutamate transporter (vGluT) and thus likely secrete glutamate, a neurotransmitter known to inhibit motoneurons. These anatomical results suggest that GVLIs are premotor interneurons that locally inhibit motoneurons in the same segment. Consistent with this, optogenetic activation of GVLIs with the red-shifted channelrhodopsin, CsChrimson ceased ongoing peristalsis in crawling larvae. Simultaneous calcium imaging of the activity of GVLIs and motoneurons showed that GVLIs’ wave-like activity lagged behind that of motoneurons by several segments. Thus, GVLIs are activated when the front of a forward motor wave reaches the second or third anterior segment. We propose that GVLIs are part of the feedback inhibition system that terminates motor activity once the front of the motor wave proceeds to anterior segments. PMID:26335437

Identification of Inhibitory Premotor Interneurons Activated at a Late Phase in a Motor Cycle during Drosophila Larval Locomotion.

PubMed

Itakura, Yuki; Kohsaka, Hiroshi; Ohyama, Tomoko; Zlatic, Marta; Pulver, Stefan R; Nose, Akinao

2015-01-01

Rhythmic motor patterns underlying many types of locomotion are thought to be produced by central pattern generators (CPGs). Our knowledge of how CPG networks generate motor patterns in complex nervous systems remains incomplete, despite decades of work in a variety of model organisms. Substrate borne locomotion in Drosophila larvae is driven by waves of muscular contraction that propagate through multiple body segments. We use the motor circuitry underlying crawling in larval Drosophila as a model to try to understand how segmentally coordinated rhythmic motor patterns are generated. Whereas muscles, motoneurons and sensory neurons have been well investigated in this system, far less is known about the identities and function of interneurons. Our recent study identified a class of glutamatergic premotor interneurons, PMSIs (period-positive median segmental interneurons), that regulate the speed of locomotion. Here, we report on the identification of a distinct class of glutamatergic premotor interneurons called Glutamatergic Ventro-Lateral Interneurons (GVLIs). We used calcium imaging to search for interneurons that show rhythmic activity and identified GVLIs as interneurons showing wave-like activity during peristalsis. Paired GVLIs were present in each abdominal segment A1-A7 and locally extended an axon towards a dorsal neuropile region, where they formed GRASP-positive putative synaptic contacts with motoneurons. The interneurons expressed vesicular glutamate transporter (vGluT) and thus likely secrete glutamate, a neurotransmitter known to inhibit motoneurons. These anatomical results suggest that GVLIs are premotor interneurons that locally inhibit motoneurons in the same segment. Consistent with this, optogenetic activation of GVLIs with the red-shifted channelrhodopsin, CsChrimson ceased ongoing peristalsis in crawling larvae. Simultaneous calcium imaging of the activity of GVLIs and motoneurons showed that GVLIs' wave-like activity lagged behind that of motoneurons by several segments. Thus, GVLIs are activated when the front of a forward motor wave reaches the second or third anterior segment. We propose that GVLIs are part of the feedback inhibition system that terminates motor activity once the front of the motor wave proceeds to anterior segments.

Dynamically reconfigurable holographic metasurface aperture for a Mills-Cross monochromatic microwave camera.

PubMed

Yurduseven, Okan; Marks, Daniel L; Fromenteze, Thomas; Smith, David R

2018-03-05

We present a reconfigurable, dynamic beam steering holographic metasurface aperture to synthesize a microwave camera at K-band frequencies. The aperture consists of a 1D printed microstrip transmission line with the front surface patterned into an array of slot-shaped subwavelength metamaterial elements (or meta-elements) dynamically tuned between "ON" and "OFF" states using PIN diodes. The proposed aperture synthesizes a desired radiation pattern by converting the waveguide-mode to a free space radiation by means of a binary modulation scheme. This is achieved in a holographic manner; by interacting the waveguide-mode (reference-wave) with the metasurface layer (hologram layer). It is shown by means of full-wave simulations that using the developed metasurface aperture, the radiated wavefronts can be engineered in an all-electronic manner without the need for complex phase-shifting circuits or mechanical scanning apparatus. Using the dynamic beam steering capability of the developed antenna, we synthesize a Mills-Cross composite aperture, forming a single-frequency all-electronic microwave camera.

Wave of chaos in a spatial eco-epidemiological system: Generating realistic patterns of patchiness in rabbit-lynx dynamics.

PubMed

Upadhyay, Ranjit Kumar; Roy, Parimita; Venkataraman, C; Madzvamuse, A

2016-11-01

In the present paper, we propose and analyze an eco-epidemiological model with diffusion to study the dynamics of rabbit populations which are consumed by lynx populations. Existence, boundedness, stability and bifurcation analyses of solutions for the proposed rabbit-lynx model are performed. Results show that in the presence of diffusion the model has the potential of exhibiting Turing instability. Numerical results (finite difference and finite element methods) reveal the existence of the wave of chaos and this appears to be a dominant mode of disease dispersal. We also show the mechanism of spatiotemporal pattern formation resulting from the Hopf bifurcation analysis, which can be a potential candidate for understanding the complex spatiotemporal dynamics of eco-epidemiological systems. Implications of the asymptotic transmission rate on disease eradication among rabbit population which in turn enhances the survival of Iberian lynx are discussed. Crown Copyright © 2016. Published by Elsevier Inc. All rights reserved.

Meteorologic, oceanographic, and geomorphic controls on circulation and residence time in a coral reef-lined embayment: Faga'alu Bay, American Samoa

NASA Astrophysics Data System (ADS)

Storlazzi, C. D.; Cheriton, O. M.; Messina, A. M.; Biggs, T. W.

2018-06-01

Water circulation over coral reefs can determine the degree to which reef organisms are exposed to the overlying waters, so understanding circulation is necessary to interpret spatial patterns in coral health. Because coral reefs often have high geomorphic complexity, circulation patterns and the duration of exposure, or "local residence time" of a water parcel, can vary substantially over small distances. Different meteorologic and oceanographic forcings can further alter residence time patterns over reefs. Here, spatially dense Lagrangian surface current drifters and Eulerian current meters were used to characterize circulation patterns and resulting residence times over different regions of the reefs in Faga'alu Bay, American Samoa, during three distinct forcing periods: calm, strong winds, and large waves. Residence times varied among different geomorphic zones of the reef and were reflected in the spatially varying health of the corals across the embayment. The relatively healthy, seaward fringing reef consistently had the shortest residence times, as it was continually flushed by wave breaking at the reef crest, whereas the degraded, sheltered, leeward fringing reef consistently had the longest residence times, suggesting this area is more exposed to land-based sources of pollution. Strong wind forcing resulted in the longest residence times by pinning the water in the bay, whereas large wave forcing flushed the bay and resulted in the shortest residence times. The effect of these different forcings on residence times was fairly consistent across all reef geomorphic zones, with the shift from wind to wave forcing shortening mean residence times by approximately 50%. Although ecologically significant to the coral organisms in the nearshore reef zones, these shortened residence times were still 2-3 times longer than those associated with the seaward fringing reef across all forcing conditions, demonstrating how the geomorphology of a reef environment sets a first-order control on reef health.

It's the Physics: Organized Complexity in the Arctic/Midlatitude Weather Controversy

NASA Astrophysics Data System (ADS)

Overland, J. E.; Francis, J. A.; Wang, M.

2017-12-01

There is intense scientific and public interest in whether major Arctic changes can and will impact mid-latitude weather. Despite numerous workshops and a growing literature, convergence of understanding is lacking, with major objections about possible large impacts within the scientific community. Yet research on the Arctic as a new potential driver in improving subseasonal forecasting at midlatitudes remains a priority. A recent review laid part of the controversy on shortcomings in experimental design and ill-suited metrics, such as examining the influence of only sea-ice loss rather than overall Arctic temperature amplification, and/or calculating averages over large regions, long time periods, or many ensemble members that would tend to obscure event-like Arctic connections. The present analysis lays the difficulty at a deeper level owing to the inherently complex physics. Jet-stream dynamics and weather linkages on the scale of a week to months has characteristics of an organized complex system, with large-scale processes that operate in patterned, quasi-geostrophic ways but whose component feedbacks are continually changing. Arctic linkages may be state dependent, i.e., relationships may be more robust in one atmospheric wave pattern than another, generating intermittency. The observational network is insufficient to fully initialize such a system and the inherent noise obscures linkage signals, leading to an underdetermined problem; often more than one explanation can fit the data. Further, the problem may be computationally irreducible; the only way to know the result of these interactions is to trace out their path over time. Modeling is a suggested approach, but at present it is unclear whether previous model studies fully resolve anticipated complexity. The jet stream from autumn to early winter is characterized by non-linear interactions among enhanced atmospheric planetary waves, irregular transitions between the zonal and meridional flows, and the maintenance of atmospheric blocks (near stationary large amplitude atmospheric waves). For weather forecast improvement, but not necessarily to elucidate mechanism of linkages, a Numerical Weather Prediction (NWP) approach is appropriate; such is the plan for the upcoming Year of Polar Prediction (YOPP).

Clustering of Ca2+ transients in interstitial cells of Cajal defines slow wave duration

PubMed Central

Drumm, Bernard T.; Hennig, Grant W.; Battersby, Matthew J.; Sung, Tae Sik

2017-01-01

Interstitial cells of Cajal (ICC) in the myenteric plexus region (ICC-MY) of the small intestine are pacemakers that generate rhythmic depolarizations known as slow waves. Slow waves depend on activation of Ca2+-activated Cl− channels (ANO1) in ICC, propagate actively within networks of ICC-MY, and conduct to smooth muscle cells where they generate action potentials and phasic contractions. Thus, mechanisms of Ca2+ regulation in ICC are fundamental to the motor patterns of the bowel. Here, we characterize the nature of Ca2+ transients in ICC-MY within intact muscles, using mice expressing a genetically encoded Ca2+ sensor, GCaMP3, in ICC. Ca2+ transients in ICC-MY display a complex firing pattern caused by localized Ca2+ release events arising from multiple sites in cell somata and processes. Ca2+ transients are clustered within the time course of slow waves but fire asynchronously during these clusters. The durations of Ca2+ transient clusters (CTCs) correspond to slow wave durations (plateau phase). Simultaneous imaging and intracellular electrical recordings revealed that the upstroke depolarization of slow waves precedes clusters of Ca2+ transients. Summation of CTCs results in relatively uniform Ca2+ responses from one slow wave to another. These Ca2+ transients are caused by Ca2+ release from intracellular stores and depend on ryanodine receptors as well as amplification from IP3 receptors. Reduced extracellular Ca2+ concentrations and T-type Ca2+ channel blockers decreased the number of firing sites and firing probability of Ca2+ transients. In summary, the fundamental electrical events of small intestinal muscles generated by ICC-MY depend on asynchronous firing of Ca2+ transients from multiple intracellular release sites. These events are organized into clusters by Ca2+ influx through T-type Ca2+ channels to sustain activation of ANO1 channels and generate the plateau phase of slow waves. PMID:28592421

Chimera states in complex networks: interplay of fractal topology and delay

NASA Astrophysics Data System (ADS)

Sawicki, Jakub; Omelchenko, Iryna; Zakharova, Anna; Schöll, Eckehard

2017-06-01

Chimera states are an example of intriguing partial synchronization patterns emerging in networks of identical oscillators. They consist of spatially coexisting domains of coherent (synchronized) and incoherent (desynchronized) dynamics. We analyze chimera states in networks of Van der Pol oscillators with hierarchical connectivities, and elaborate the role of time delay introduced in the coupling term. In the parameter plane of coupling strength and delay time we find tongue-like regions of existence of chimera states alternating with regions of existence of coherent travelling waves. We demonstrate that by varying the time delay one can deliberately stabilize desired spatio-temporal patterns in the system.

Multifrequency synthesis and extraction using square wave projection patterns for quantitative tissue imaging.

PubMed

Nadeau, Kyle P; Rice, Tyler B; Durkin, Anthony J; Tromberg, Bruce J

2015-11-01

We present a method for spatial frequency domain data acquisition utilizing a multifrequency synthesis and extraction (MSE) method and binary square wave projection patterns. By illuminating a sample with square wave patterns, multiple spatial frequency components are simultaneously attenuated and can be extracted to determine optical property and depth information. Additionally, binary patterns are projected faster than sinusoids typically used in spatial frequency domain imaging (SFDI), allowing for short (millisecond or less) camera exposure times, and data acquisition speeds an order of magnitude or more greater than conventional SFDI. In cases where sensitivity to superficial layers or scattering is important, the fundamental component from higher frequency square wave patterns can be used. When probing deeper layers, the fundamental and harmonic components from lower frequency square wave patterns can be used. We compared optical property and depth penetration results extracted using square waves to those obtained using sinusoidal patterns on an in vivo human forearm and absorbing tube phantom, respectively. Absorption and reduced scattering coefficient values agree with conventional SFDI to within 1% using both high frequency (fundamental) and low frequency (fundamental and harmonic) spatial frequencies. Depth penetration reflectance values also agree to within 1% of conventional SFDI.

Multifrequency synthesis and extraction using square wave projection patterns for quantitative tissue imaging

PubMed Central

Nadeau, Kyle P.; Rice, Tyler B.; Durkin, Anthony J.; Tromberg, Bruce J.

2015-01-01

Abstract. We present a method for spatial frequency domain data acquisition utilizing a multifrequency synthesis and extraction (MSE) method and binary square wave projection patterns. By illuminating a sample with square wave patterns, multiple spatial frequency components are simultaneously attenuated and can be extracted to determine optical property and depth information. Additionally, binary patterns are projected faster than sinusoids typically used in spatial frequency domain imaging (SFDI), allowing for short (millisecond or less) camera exposure times, and data acquisition speeds an order of magnitude or more greater than conventional SFDI. In cases where sensitivity to superficial layers or scattering is important, the fundamental component from higher frequency square wave patterns can be used. When probing deeper layers, the fundamental and harmonic components from lower frequency square wave patterns can be used. We compared optical property and depth penetration results extracted using square waves to those obtained using sinusoidal patterns on an in vivo human forearm and absorbing tube phantom, respectively. Absorption and reduced scattering coefficient values agree with conventional SFDI to within 1% using both high frequency (fundamental) and low frequency (fundamental and harmonic) spatial frequencies. Depth penetration reflectance values also agree to within 1% of conventional SFDI. PMID:26524682

Nodal portraits of quantum billiards: Domains, lines, and statistics

NASA Astrophysics Data System (ADS)

Jain, Sudhir Ranjan; Samajdar, Rhine

2017-10-01

This is a comprehensive review of the nodal domains and lines of quantum billiards, emphasizing a quantitative comparison of theoretical findings to experiments. The nodal statistics are shown to distinguish not only between regular and chaotic classical dynamics but also between different geometric shapes of the billiard system itself. How a random superposition of plane waves can model chaotic eigenfunctions is discussed and the connections of the complex morphology of the nodal lines thereof to percolation theory and Schramm-Loewner evolution are highlighted. Various approaches to counting the nodal domains—using trace formulas, graph theory, and difference equations—are also illustrated with examples. The nodal patterns addressed pertain to waves on vibrating plates and membranes, acoustic and electromagnetic modes, wave functions of a "particle in a box" as well as to percolating clusters, and domains in ferromagnets, thus underlining the diversity and far-reaching implications of the problem.

Clinical significance of J-wave in elite athletes.

PubMed

Pelliccia, Antonio; Quattrini, Filippo M

2015-01-01

The J-wave pattern on 12-lead ECG is traditionally defined as a positive deflection at junction between the end of the QRS and the beginning of the ST-segment. This pattern has recently been associated with increased risk for idiopathic ventricular fibrillation in the absence of cardiovascular disease. The interest for the clinical significance of J-wave pattern as a potential ECG hallmark of high risk for cardiac arrest has recently been reinforced by the growing practice of ECG screening, such as occurs in large population of young competitive athletes. The available scientific evidence shows that the J-wave pattern is relatively common in trained athletes (ranging from 14% to 44%) and, differently from subjects who suffered from ventricular fibrillation, commonly localized in lateral leads while it is relatively rare to be found in inferior leads. Furthermore the J-wave pattern has been demonstrated to be a dynamic phenomenon related to the training status, with the larger prominence at the peak of training and with an inverse relation between magnitude of J-wave and heart rate. In addition the J-wave pattern is usually associated with other ECG changes, such as increased QRS voltages and ST-segment elevation, as well as LV remodeling, suggesting that it likely represents another expression of the physiologic athlete's heart. Finally the scientific data available demonstrated that during a medium follow-up period the J-wave pattern does not convey risk for adverse cardiac events, including sudden death or ventricular tachyarrhythmias. Copyright © 2015 Elsevier Inc. All rights reserved.

Night and day variations of sleep in patients with disorders of consciousness.

PubMed

Wislowska, Malgorzata; Del Giudice, Renata; Lechinger, Julia; Wielek, Tomasz; Heib, Dominik P J; Pitiot, Alain; Pichler, Gerald; Michitsch, Gabriele; Donis, Johann; Schabus, Manuel

2017-03-21

Brain injuries substantially change the entire landscape of oscillatory dynamics and render detection of typical sleep patterns difficult. Yet, sleep is characterized not only by specific EEG waveforms, but also by its circadian organization. In the present study we investigated whether brain dynamics of patients with disorders of consciousness systematically change between day and night. We recorded ~24 h EEG at the bedside of 18 patients diagnosed to be vigilant but unaware (Unresponsive Wakefulness Syndrome) and 17 patients revealing signs of fluctuating consciousness (Minimally Conscious State). The day-to-night changes in (i) spectral power, (ii) sleep-specific oscillatory patterns and (iii) signal complexity were analyzed and compared to 26 healthy control subjects. Surprisingly, the prevalence of sleep spindles and slow waves did not systematically vary between day and night in patients, whereas day-night changes in EEG power spectra and signal complexity were revealed in minimally conscious but not unaware patients.

Seismic anisotropy and the state of stress in volcanic systems

NASA Astrophysics Data System (ADS)

Kendall, Michael

2017-04-01

The active magmatic and hydrothermal systems of volcanoes can lead to complicated stress patterns that can vary over short spatial and temporal scales. An attractive approach to studying the state of stress in such systems is to investigate seismic anisotropy using shear-wave splitting in upper-crustal earthquakes. Anisotropy can be caused by a range of mechanisms, including crystal preferred orientation and fine scale layering, but the dominant mechanism in volcanic systems is likely the preferred alignment of fluid-filled cracks and fractures. In general, cracks and fractures in the near surface tend to align parallel to the dominant direction of maximum horizontal stress. However, the observed patterns in volcanoes indicate more complicated stress patterns, which sometimes even change in time. A challenge is to untangle the magmatic versus hydrothermal control on stress. Here I summarise observations of seismic anisotropy across several volcanoes in different settings. Seismic anisotropy of the upper crust in the vicinity of the Soufrière Hills volcano - on the island of Montserrat in the Lesser Antilles - has been studied using shear wave splitting (SWS) analysis of shallow volcano-tectonic events. Clear spatial variations in anisotropy are observed, which are consistent with structurally controlled anisotropy resulting from a left-lateral transtensional array of faults that crosses the volcanic complex. Corbetti and Aluto are two volcanoes located roughly 100 km apart in the Main Ethiopian Rift. Their evolution is strongly controlled by pre-existing structural trends. In the case of Aluto, the anisotropy follows the Wonji fault belt in a rift parallel nearly N-S direction, but significantly oblique to the older border faults. In contrast, the shear-wave splitting at Corbetti is more complicated and supports ideas of the influence of a much-older pre-existing cross-rift structure known as the Goba-Bonga fault. Ontake volcano in Japan is another arc volcano. It exhibits a complicated stress system, as revealed by earthquake source mechanisms and patterns of shear-wave splitting. Ontake has seen two recent eruptions, a minor phreatic eruption in 2007 and a more significant eruption in 2014. The pattern of seismic anisotropy shows no temporal variation with the first eruption. However, with the second eruption there is a clear change in both the magnitude of the shear-wave splitting and the orientation of the fast shear-wave, suggesting that there is a critical stress threshold where the anisotropy changes. In summary, with a good seismic network, shear-wave splitting measurements are relatively easy to make. They capture details of changes in the stress system across a volcano, which may be a useful monitoring tool. Furthermore, they also provide a good reconnaissance tool that provides insights into structural controls on the formation of volcanoes.

Phase-resolved analysis of the susceptibility of pinned spiral waves to far-field pacing in a two-dimensional model of excitable media

PubMed Central

Bittihn, Philip; Squires, Amgad; Luther, Gisa; Bodenschatz, Eberhard; Krinsky, Valentin; Parlitz, Ulrich; Luther, Stefan

2010-01-01

Life-threatening cardiac arrhythmias are associated with the existence of stable and unstable spiral waves. Termination of such complex spatio-temporal patterns by local control is substantially limited by anchoring of spiral waves at natural heterogeneities. Far-field pacing (FFP) is a new local control strategy that has been shown to be capable of unpinning waves from obstacles. In this article, we investigate in detail the FFP unpinning mechanism for a single rotating wave pinned to a heterogeneity. We identify qualitatively different phase regimes of the rotating wave showing that the concept of vulnerability is important but not sufficient to explain the failure of unpinning in all cases. Specifically, we find that a reduced excitation threshold can lead to the failure of unpinning, even inside the vulnerable window. The critical value of the excitation threshold (below which no unpinning is possible) decreases for higher electric field strengths and larger obstacles. In contrast, for a high excitation threshold, the success of unpinning is determined solely by vulnerability, allowing for a convenient estimation of the unpinning success rate. In some cases, we also observe phase resetting in discontinuous phase intervals of the spiral wave. This effect is important for the application of multiple stimuli in experiments. PMID:20368243

Magnetic antenna excitation of whistler modes. IV. Receiving antennas and reciprocity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stenzel, R. L., E-mail: stenzel@physics.ucla.edu; Urrutia, J. M.

Antenna radiation patterns are an important property of antennas. Reciprocity holds in free space and the radiation patterns for exciting and receiving antennas are the same. In anisotropic plasmas, radiation patterns are complicated by the fact that group and phase velocities differ and certain wave properties like helicity depend on the direction of wave propagation with respect to the background magnetic field B{sub 0}. Interference and wave focusing effects are different than in free space. Reciprocity does not necessarily hold in a magnetized plasma. The present work considers the properties of various magnetic antennas used for receiving whistler modes. Itmore » is based on experimental data from exciting low frequency whistler modes in a large uniform laboratory plasma. By superposition of linear waves from different antennas, the radiation patterns of antenna arrays are derived. Plane waves are generated and used to determine receiving radiation patterns of different receiving antennas. Antenna arrays have radiation patterns with narrow lobes, whose angular position can be varied by physical rotation or electronic phase shifting. Reciprocity applies to broadside antenna arrays but not to end fire arrays which can have asymmetric lobes with respect to B{sub 0}. The effect of a relative motion between an antenna and the plasma has been modeled by the propagation of a short wave packet moving along a linear antenna array. An antenna moving across B{sub 0} has a radiation pattern characterized by an oscillatory “whistler wing.” A receiving antenna in motion can detect any plane wave within the group velocity resonance cone. The radiation pattern also depends on loop size relative to the wavelength. Motional effects prevent reciprocity. The concept of the radiation pattern loses its significance for wave packets since the received signal does not only depend on the antenna but also on the properties of the wave packet. The present results are of fundamental interest and of relevance to loop antennas in space.« less

Integrability of the coupled cubic-quintic complex Ginzburg-Landau equations and multiple-soliton solutions via mathematical methods

NASA Astrophysics Data System (ADS)

Selima, Ehab S.; Seadawy, Aly R.; Yao, Xiaohua; Essa, F. A.

2018-02-01

This paper is devoted to study the (1+1)-dimensional coupled cubic-quintic complex Ginzburg-Landau equations (cc-qcGLEs) with complex coefficients. This equation can be used to describe the nonlinear evolution of slowly varying envelopes of periodic spatial-temporal patterns in a convective binary fluid. Dispersion relation and properties of cc-qcGLEs are constructed. Painlevé analysis is used to check the integrability of cc-qcGLEs and to establish the Bäcklund transformation form. New traveling wave solutions and a general form of multiple-soliton solutions of cc-qcGLEs are obtained via the Bäcklund transformation and simplest equation method with Bernoulli, Riccati and Burgers’ equations as simplest equations.

Measurement of tidal and residual currents in the Strait of Hormuz

NASA Astrophysics Data System (ADS)

Azizpour, Jafar; Siadatmousavi, Seyed Mostafa; Chegini, Vahid

2016-09-01

Quantifying the current in the Strait of Hormuz (SH) is vital for understanding the circulation in the Persian Gulf. To measure the current in the strait, four subsurface moorings were deployed at four different stations close to SH from early November 2012 to the end of January 2013. Tidal current were dominant in the SH. The tides in the SH were complex partially standing waves and the dominant pattern varied from being primarily semi-diurnal to diurnal. The phase difference between tidal constituents of current and sea level elevation time series was used as an index to show the partially progressive wave pattern inside the study area. At mooring positions 3 and 4, located to the left of SH, the phase differences were close to 160° and 100°, respectively. It indicates partially progressive waves in opposite direction at these stations. K1 and M2 were the two main constituents at all stations inside the study area. At surface, the magnitude of semi-major axis of ellipses for M2 constituent was larger than corresponding value for K1 whereas at the bottom layer, the opposite pattern was observed. The M2 rotary coefficients at mooring 1 illustrated that current vector at the bottom layer rotated in opposite direction compared to current vectors at the middle and surface layers. The rotation was counterclockwise in the bottom layer, while it was clockwise in the surface and middle layers.

On the shelf resonances of the Gulf of Carpentaria and the Arafura Sea

NASA Astrophysics Data System (ADS)

Webb, D. J.

2012-09-01

A numerical model is used to investigate the resonances of the Gulf of Carpentaria and the Arafura Sea, and the additional insights that come from extending the analysis into the complex angular velocity plane. When the model is forced at the shelf edge with physically realistic real values of the angular velocity, the response functions at points within the region show maxima and other behaviour which imply that resonances are involved but provide little additional information. The study is then extended to complex angular velocities, and the results then show a clear pattern of gravity wave and Rossby wave like resonances. The properties of the resonances are investigated and used to reinterpret the response at real values of angular velocity. It is found that in some regions the response is dominated by modes trapped between the shelf edge and the coast or between opposing coastlines. In other regions the resonances show cooperative behaviour, possibly indicating the importance of other physical processes.

Emergent dynamics of spatio-temporal chaos in a heterogeneous excitable medium.

PubMed

Bittihn, Philip; Berg, Sebastian; Parlitz, Ulrich; Luther, Stefan

2017-09-01

Self-organized activation patterns in excitable media such as spiral waves and spatio-temporal chaos underlie dangerous cardiac arrhythmias. While the interaction of single spiral waves with different types of heterogeneity has been studied extensively, the effect of heterogeneity on fully developed spatio-temporal chaos remains poorly understood. We investigate how the complexity and stability properties of spatio-temporal chaos in the Bär-Eiswirth model of excitable media depend on the heterogeneity of the underlying medium. We employ different measures characterizing the chaoticity of the system and find that the spatial arrangement of multiple discrete lower excitability regions has a strong impact on the complexity of the dynamics. Varying the number, shape, and spatial arrangement of the heterogeneities, we observe strong emergent effects ranging from increases in chaoticity to the complete cessation of chaos, contrasting the expectation from the homogeneous behavior. The implications of our findings for the development and treatment of arrhythmias in the heterogeneous cardiac muscle are discussed.

Emergent dynamics of spatio-temporal chaos in a heterogeneous excitable medium

NASA Astrophysics Data System (ADS)

Bittihn, Philip; Berg, Sebastian; Parlitz, Ulrich; Luther, Stefan

2017-09-01

Self-organized activation patterns in excitable media such as spiral waves and spatio-temporal chaos underlie dangerous cardiac arrhythmias. While the interaction of single spiral waves with different types of heterogeneity has been studied extensively, the effect of heterogeneity on fully developed spatio-temporal chaos remains poorly understood. We investigate how the complexity and stability properties of spatio-temporal chaos in the Bär-Eiswirth model of excitable media depend on the heterogeneity of the underlying medium. We employ different measures characterizing the chaoticity of the system and find that the spatial arrangement of multiple discrete lower excitability regions has a strong impact on the complexity of the dynamics. Varying the number, shape, and spatial arrangement of the heterogeneities, we observe strong emergent effects ranging from increases in chaoticity to the complete cessation of chaos, contrasting the expectation from the homogeneous behavior. The implications of our findings for the development and treatment of arrhythmias in the heterogeneous cardiac muscle are discussed.

The electrocardiogram signal of Seba's short-tailed bat, Carollia perspicillata.

PubMed

Mihova, Diana; Hechavarría, Julio C

2016-07-01

A number of studies have successfully used electrocardiogram (ECG) signals to characterize complex physiological phenomena such as associative learning in bats. However, at present, no thorough characterization of the structure of ECG signals is available for these animals. The aim of the present study was to quantitatively characterize features of the ECG signals in the bat species Carollia perspicillata, a species that is commonly used in neuroethology studies. Our results show that the ECG signals of C. perspicillata follow the typical mammalian pattern, in that they are composed by a P wave, QRS complex and a T wave. Peak-to-peak amplitudes in the bats' ECG signals were larger in measuring configurations in which one of the electrodes was attached to the right thumb. In addition, large differences in the instantaneous heart rate (HR) distributions were observed between ketamine/xylazine anesthetized and awake bats. Ketamine/xylazine might target the neural circuits that control HR, therefore, instantaneous HR measurements should only be used as physiological marker in awake animals.

Jet and Vortex Projectile Flows in Shock/bubble-on-wall Configuration

NASA Astrophysics Data System (ADS)

Peng, Gaozhu; Zabusky, Norman

2001-11-01

We observe intense coaxial upstream and radial flow structures from a shock in air interacting with a SF6 half-bubble placed against an ideally reflecting wall. Our axisymmetric numerical simulations were done with PPM and models a spherical bubble struck symmetrically by two identical approaching shocks . A "dual" vorticity deposition arises at early time and a coaxial upstream moving primary jet and radial vortex ring flow appears. A coherent vortex ring or vortex projectile (VP), with entrained shocklets originates from the vortex layer produced at the Mach stem (which arises from the primary reflected shock). This VP moves ahead of the jet. The original transmitted wave and other trapped waves in the expanding axial jet causes a collapsing and expanding cavity and other instabilities on the complex bubble interface. We present and analyze our results with different diagnostics: vorticity, density, divergence of velocity, and numerical shadowgraph patterns; global quantification of circulation, enstrophy and r-integrated vorticity; etc. We also discuss data projection and filtering for quantifying and validating complex flows.

Significant seismic anisotropy beneath southern Tibet inferred from splitting of direct S-waves

NASA Astrophysics Data System (ADS)

Singh, Arun; Eken, Tuna; Mohanty, Debasis D.; Saikia, Dipankar; Singh, Chandrani; Ravi Kumar, M.

2016-01-01

This study presents a total of 12008 shear wave splitting measurements obtained using the reference-station technique applied to direct S-waves from 106 earthquakes recorded at 143 seismic stations of the Hi-CLIMB seismic network. The results reveal significant anisotropy in regions of southern Tibet where null or negligible anisotropy has been hitherto reported from SK(K)S measurements. While the individual fast polarization direction (FPD) at each station are found to be consistent, the splitting time delays (TDs) exhibit deviations particularly at stations located south of the Indus-Tsangpo Suture Zone. The fast polarization directions (FPDs) are oriented (a) NE-SW to E-W to the south of the Indus-Tsangpo Suture Zone (b) NE-SW to ENE-SSW between Bangong-Nujiang Suture Zone and the Indus-Tsangpo Suture Zone (ITSZ) and (c) E-W to the extreme north of the profile. The splitting time delays (δt) vary between 0.45 and 1.3 s south of the ITSZ (<30°N latitude), while they range from 0.9 to 1.4 s north of it. The overall trends are similar to SKS/SKKS results. However, the differences may be due to the not so near vertical paths of direct S waves which may sample the anisotropy in a different way in comparison to SKS waves, or insufficient number of SKS observations. The significant anisotropy (∼ 0.8 s) observed beneath Himalaya reveals a complex deformation pattern in the region and can be best explained by the combined effects of deformation related to shear at the base of the lithosphere and subduction related flows with possible contributions from the crust. Additional measurements obtained using direct S-waves provide new constraints in regions with complex anisotropy.

c-Abl interacts with the WAVE2 signaling complex to induce membrane ruffling and cell spreading.

PubMed

Stuart, Jeremy R; Gonzalez, Francis H; Kawai, Hidehiko; Yuan, Zhi-Min

2006-10-20

The Wiskott-Aldrich syndrome-related protein WAVE2 promotes Arp2/3-dependent actin polymerization downstream of Rho-GTPase activation. The Abelson-interacting protein-1 (Abi-1) forms the core of the WAVE2 complex and is necessary for proper stimulation of WAVE2 activity. Here we have shown that the Abl-tyrosine kinase interacts with the WAVE2 complex and that Abl kinase activity facilitates interaction between Abl and WAVE2 complex members. We have characterized various interactions between Abl and members of the WAVE2 complex and revealed that Abi-1 promotes interaction between Abl and WAVE2 members. We have demonstrated that Abl-dependent phosphorylation of WAVE2 is necessary for its activation in vivo, which is highlighted by the findings that RNA interference of WAVE2 expression in Abl/Arg-/- cells has no additive effect on the amount of membrane ruffling. Furthermore, Abl phosphorylates WAVE2 on tyrosine 150, and WAVE2-deficient cells rescued with a Y150F mutant fail to regain their ability to ruffle and form microspikes, unlike cells rescued with wild-type WAVE2. Together, these data show that c-Abl activates WAVE2 via tyrosine phosphorylation to promote actin remodeling in vivo and that Abi-1 forms the crucial link between these two factors.

Functional significance of the pattern of renal sympathetic nerve activation.

PubMed

Dibona, G F; Sawin, L L

1999-08-01

To assess the renal functional significance of the pattern of renal sympathetic nerve activation, computer-generated stimulus patterns (delivered at constant integrated voltage) were applied to the decentralized renal sympathetic nerve bundle and renal hemodynamic and excretory responses determined in anesthetized rats. When delivered at the same integrated voltage, stimulus patterns resembling those observed in in vivo multifiber recordings of renal sympathetic nerve activity (diamond-wave patterns) produced greater renal vasoconstrictor responses than conventional square-wave patterns. Within diamond-wave patterns, increasing integrated voltage by increasing amplitude produced twofold greater renal vasoconstrictor responses than by increasing duration. With similar integrated voltages that were subthreshold for renal vasoconstriction, neither diamond- nor square-wave pattern altered glomerular filtration rate, whereas diamond- but not square-wave pattern reversibly decreased urinary sodium excretion by 25 +/- 3%. At the same number of pulses per second, intermittent stimulation produced faster and greater renal vasoconstriction than continuous stimulation. At the same number of pulses per second, increases in rest period during intermittent stimulation proportionally augmented the renal vasoconstrictor response compared with that observed with continuous stimulation; the maximum augmentation of 55% occurred at a rest period of 500 ms. These results indicate that the pattern of renal sympathetic nerve stimulation (activity) significantly influences the rapidity, magnitude, and selectivity of the renal vascular and tubular responses.

WAVE2 signaling mediates invasion of polarized epithelial cells by Salmonella typhimurium.

PubMed

Shi, Jing; Scita, Giorgio; Casanova, James E

2005-08-19

The bacterial pathogen Salmonella penetrates the intestinal epithelium by inducing its own phagocytosis into epithelial cells. The dramatic reorganization of the actin cytoskeleton required for internalization is driven by bacterial manipulation of host signaling pathways, including activation of the Rho family GTPase Rac1 and subsequent activation of the Arp2/3 complex. However, the mechanisms linking these two events remain poorly understood. Rac1 is thought to promote activation of the Arp2/3 complex through its interaction with suppressor of cAMP receptor/WASP family verprolin-homologous (SCAR/WAVE) family proteins, but this interaction is apparently indirect. Two different Rac1 effectors have been shown to bind WAVE2: IRSp53, the SH3 domain of which binds the WAVE2 proline-rich domain, and PIR121/Sra-1, which forms a pentameric complex containing WAVE, Abi1, Nap1, and HSPC300. However, the extent to which each of these complexes contributes to Arp2/3 complex activation in the context of Salmonella infection is unclear. Here, we show that WAVE2 is necessary for efficient invasion of epithelial cells by Salmonella typhimurium. We found that although Salmonella infection strongly promotes the formation of an IRSp53/WAVE2 complex, IRSp53 is not necessary for bacterial internalization. In contrast, disruption of the PIR121/Nap1/Abi1/WAVE2/HSPC300 complex potently inhibits bacterial uptake. These results indicate that WAVE2 is an important component in signaling pathways leading to Salmonella invasion. Although infection leads to the formation of an IRSp53/WAVE2 complex, it is the association of WAVE2 with the Abi1/Nap1/PIR121/HSPC300 complex that regulates bacterial internalization.

Optical study of interactions among propagation waves of neural excitation in the rat somatosensory cortex evoked by forelimb and hindlimb stimuli.

PubMed

Hama, Noriyuki; Kawai, Minako; Ito, Shin-Ichi; Hirota, Akihiko

2018-05-01

Multisite optical recording has revealed that the neural excitation wave induced by a sensory stimulation begins at a focus and propagates in the cortex. This wave is considered to be important for computation in the sensory cortex, particularly the integration of sensory information; however, the nature of this wave remains largely unknown. In the present study, we examined the interaction between two waves in the rat sensory cortex induced by hindlimb and forelimb stimuli with different interstimulus intervals. We classified the resultant patterns as follows: 1) the collision of two waves, 2) the hindlimb response being evoked while the forelimb-induced wave is passing the hindlimb focus, and 3) the hindlimb response being evoked after the forelimb-induced wave has passed the hindlimb focus. In pattern 1, the two waves fused into a single wave, but the propagation pattern differed from that predicted by the superimposition of two singly induced propagation courses. In pattern 2, the state of the interaction between the two waves varied depending on the phase of optical signals constituting the forelimb-induced wave around the hindlimb focus. Although no hindlimb-induced wave was observed in the rising phase, the propagating velocity of the forelimb-induced wave increased. At the peak, neither the hindlimb-induced response nor a modulatory effect on the forelimb-induced wave was detected. In pattern 3, the hindlimb-induced wave showed a reduced amplitude and spatial extent. These results indicate that the state of the interaction between waves was strongly influenced by the relative timing of sensory inputs. NEW & NOTEWORTHY Sensory stimulation-induced cortical excitation propagates as a wave and spreads over a wide area of the sensory cortex. To elucidate the characteristics of this relatively unknown phenomenon, we examined the interaction between two individually induced waves in the somatosensory cortex. Either the waves collided or the preceding wave affected the emergence of the following one. Our results indicate that the state of the interaction was strongly influenced by the relative timing of sensory inputs.

Sorted bed forms as self-organized patterns: 2. complex forcing scenarios

USGS Publications Warehouse

Coco, Giovanni; Murray, A. Brad; Green, Malcom O.; Thieler, E. Robert; Hume, T.M.

2007-01-01

We employ a numerical model to study the development of sorted bed forms under a variety of hydrodynamic and sedimentary conditions. Results indicate that increased variability in wave height decreases the growth rate of the features and can potentially give rise to complicated, a priori unpredictable, behavior. This happens because the system responds to a change in wave characteristics by attempting to self-organize into a patterned seabed of different geometry and spacing. The new wavelength might not have enough time to emerge before a new change in wave characteristics occurs, leading to less regular seabed configurations. The new seabed configuration is also highly dependent on the preexisting morphology, which further limits the possibility of predicting future behavior. For the same reasons, variability in the mean current magnitude and direction slows down the growth of features and causes patterns to develop that differ from classical sorted bed forms. Spatial variability in grain size distribution and different types of net sediment aggradation/degradation can also result in the development of sorted bed forms characterized by a less regular shape. Numerical simulations qualitatively agree with observed geometry (spacing and height) of sorted bed forms. Also in agreement with observations is that at shallower depths, sorted bed forms are more likely to be affected by changes in the forcing conditions, which might also explain why, in shallow waters, sorted bed forms are described as ephemeral features. Finally, simulations indicate that the different sorted bed form shapes and patterns observed in the field might not necessarily be related to diverse physical mechanisms. Instead, variations in sorted bed form characteristics may result from variations in local hydrodynamic and/or sedimentary conditions.

Acoustic holograms of active regions

NASA Astrophysics Data System (ADS)

Chou, Dean-Yi

2008-10-01

We propose a method to study solar magnetic regions in the solar interior with the principle of optical holography. A magnetic region in the solar interior scatters the solar background acoustic waves. The scattered waves and background waves could form an interference pattern on the solar surface. We investigate the feasibility of detecting this interference pattern on the solar surface, and using it to construct the three-dimensional scattered wave from the magnetic region with the principle of optical holography. In solar acoustic holography, the background acoustic waves play the role of reference wave; the magnetic region plays the role of the target object; the interference pattern, acoustic power map, on the solar surface plays the role of the hologram.

Classification of epileptiform and wicket spike of EEG pattern using backpropagation neural network

NASA Astrophysics Data System (ADS)

Puspita, Juni Wijayanti; Jaya, Agus Indra; Gunadharma, Suryani

2017-03-01

Epilepsy is characterized by recurrent seizures that is resulted by permanent brain abnormalities. One of tools to support the diagnosis of epilepsy is Electroencephalograph (EEG), which describes the recording of brain electrical activity. Abnormal EEG patterns in epilepsy patients consist of Spike and Sharp waves. While both waves, there is a normal pattern that sometimes misinterpreted as epileptiform by electroenchepalographer (EEGer), namely Wicket Spike. The main difference of the three waves are on the time duration that related to the frequency. In this study, we proposed a method to classify a EEG wave into Sharp wave, Spike wave or Wicket spike group using Backpropagation Neural Network based on the frequency and amplitude of each wave. The results show that the proposed method can classifies the three group of waves with good accuracy.

Effects of refraction by means flow velocity gradients on the standing wave pattern in three-dimensional, rectangular waveguides

NASA Technical Reports Server (NTRS)

Hersh, A. S.

1979-01-01

The influence of a mean vortical flow on the connection between the standing wave pattern in a rectangular three dimensional waveguide and the corresponding duct axial impedance was determined analytically. The solution was derived using a perturbation scheme valid for low mean flow Mach numbers and plane wave sound frequencies. The results show that deviations of the standing wave pattern due to refraction by the mean flow gradients are small.

Probability of US Heat Waves Affected by a Subseasonal Planetary Wave Pattern

NASA Technical Reports Server (NTRS)

Teng, Haiyan; Branstator, Grant; Wang, Hailan; Meehl, Gerald A.; Washington, Warren M.

2013-01-01

Heat waves are thought to result from subseasonal atmospheric variability. Atmospheric phenomena driven by tropical convection, such as the Asian monsoon, have been considered potential sources of predictability on subseasonal timescales. Mid-latitude atmospheric dynamics have been considered too chaotic to allow significant prediction skill of lead times beyond the typical 10-day range of weather forecasts. Here we use a 12,000-year integration of an atmospheric general circulation model to identify a pattern of subseasonal atmospheric variability that can help improve forecast skill for heat waves in the United States. We find that heat waves tend to be preceded by 15-20 days by a pattern of anomalous atmospheric planetary waves with a wavenumber of 5. This circulation pattern can arise as a result of internal atmospheric dynamics and is not necessarily linked to tropical heating.We conclude that some mid-latitude circulation anomalies that increase the probability of heat waves are predictable beyond the typical weather forecast range.

Limitations of one-dimensional mesoscale PBL parameterizations in reproducing mountain-wave flows

DOE PAGES

Munoz-Esparza, Domingo; Sauer, Jeremy A.; Linn, Rodman R.; ...

2015-12-08

In this study, mesoscale models are considered to be the state of the art in modeling mountain-wave flows. Herein, we investigate the role and accuracy of planetary boundary layer (PBL) parameterizations in handling the interaction between large-scale mountain waves and the atmospheric boundary layer. To that end, we use recent large-eddy simulation (LES) results of mountain waves over a symmetric two-dimensional bell-shaped hill [Sauer et al., J. Atmos. Sci. (2015)], and compare them to four commonly used PBL schemes. We find that one-dimensional PBL parameterizations produce reasonable agreement with the LES results in terms of vertical wavelength, amplitude of velocitymore » and turbulent kinetic energy distribution in the downhill shooting flow region. However, the assumption of horizontal homogeneity in PBL parameterizations does not hold in the context of these complex flow configurations. This inappropriate modeling assumption results in a vertical wavelength shift producing errors of ≈ 10 m s–1 at downstream locations due to the presence of a coherent trapped lee wave that does not mix with the atmospheric boundary layer. In contrast, horizontally-integrated momentum flux derived from these PBL schemes displays a realistic pattern. Therefore results from mesoscale models using ensembles of one-dimensional PBL schemes can still potentially be used to parameterize drag effects in general circulation models. Nonetheless, three-dimensional PBL schemes must be developed in order for mesoscale models to accurately represent complex-terrain and other types of flows where one-dimensional PBL assumptions are violated.« less

Spatial coherence resonance and spatial pattern transition induced by the decrease of inhibitory effect in a neuronal network

NASA Astrophysics Data System (ADS)

Tao, Ye; Gu, Huaguang; Ding, Xueli

2017-10-01

Spiral waves were observed in the biological experiment on rat brain cortex with the application of carbachol and bicuculline which can block inhibitory coupling from interneurons to pyramidal neurons. To simulate the experimental spiral waves, a two-dimensional neuronal network composed of pyramidal neurons and inhibitory interneurons was built. By decreasing the percentage of active inhibitory interneurons, the random-like spatial patterns change to spiral waves and to random-like spatial patterns or nearly synchronous behaviors. The spiral waves appear at a low percentage of inhibitory interneurons, which matches the experimental condition that inhibitory couplings of the interneurons were blocked. The spiral waves exhibit a higher order or signal-to-noise ratio (SNR) characterized by spatial structure function than both random-like spatial patterns and nearly synchronous behaviors, which shows that changes of the percentage of active inhibitory interneurons can induce spatial coherence resonance-like behaviors. In addition, the relationship between the coherence degree and the spatial structures of the spiral waves is identified. The results not only present a possible and reasonable interpretation to the spiral waves observed in the biological experiment on the brain cortex with disinhibition, but also reveal that the spiral waves exhibit more ordered degree in spatial patterns.

Basilar-membrane interference patterns from multiple internal reflection of cochlear traveling waves.

PubMed

Shera, Christopher A; Cooper, Nigel P

2013-04-01

At low stimulus levels, basilar-membrane (BM) mechanical transfer functions in sensitive cochleae manifest a quasiperiodic rippling pattern in both amplitude and phase. Analysis of the responses of active cochlear models suggests that the rippling is a mechanical interference pattern created by multiple internal reflection within the cochlea. In models, the interference arises when reverse-traveling waves responsible for stimulus-frequency otoacoustic emissions (SFOAEs) reflect off the stapes on their way to the ear canal, launching a secondary forward-traveling wave that combines with the primary wave produced by the stimulus. Frequency-dependent phase differences between the two waves then create the rippling pattern measurable on the BM. Measurements of BM ripples and SFOAEs in individual chinchilla ears demonstrate that the ripples are strongly correlated with the acoustic interference pattern measured in ear-canal pressure, consistent with a common origin involving the generation of SFOAEs. In BM responses to clicks, the ripples appear as temporal fine structure in the response envelope (multiple lobes, waxing and waning). Analysis of the ripple spacing and response phase gradients provides a test for the role of fast- and slow-wave modes of reverse energy propagation within the cochlea. The data indicate that SFOAE delays are consistent with reverse slow-wave propagation but much too long to be explained by fast waves.

Generation mechanisms of fundamental rogue wave spatial-temporal structure.

PubMed

Ling, Liming; Zhao, Li-Chen; Yang, Zhan-Ying; Guo, Boling

2017-08-01

We discuss the generation mechanism of fundamental rogue wave structures in N-component coupled systems, based on analytical solutions of the nonlinear Schrödinger equation and modulational instability analysis. Our analysis discloses that the pattern of a fundamental rogue wave is determined by the evolution energy and growth rate of the resonant perturbation that is responsible for forming the rogue wave. This finding allows one to predict the rogue wave pattern without the need to solve the N-component coupled nonlinear Schrödinger equation. Furthermore, our results show that N-component coupled nonlinear Schrödinger systems may possess N different fundamental rogue wave patterns at most. These results can be extended to evaluate the type and number of fundamental rogue wave structure in other coupled nonlinear systems.

Circadian pattern of fibrillatory events in non-Brugada-type idiopathic ventricular fibrillation with a focus on J waves.

PubMed

Aizawa, Yoshiyasu; Sato, Masahito; Ohno, Seiko; Horie, Minoru; Takatsuki, Seiji; Fukuda, Keiichi; Chinushi, Masaomi; Usui, Tatsuya; Aonuma, Kazutaka; Hosaka, Yukio; Haissaguerre, Michel; Aizawa, Yoshifusa

2014-12-01

The circadian pattern of ventricular fibrillation (VF) episodes in patients with idiopathic ventricular fibrillation (IVF) is poorly understood. The purpose of this study was to assess the circadian pattern of VF occurrence in patients with IVF. Excluding Brugada syndrome and other primary electrical diseases, the circadian pattern of VF occurrence was determined in 64 patients with IVF. The clinical and electrocardiographic characteristics were compared among patients with nocturnal (midnight to 6:00 AM) VF and nonnocturnal VF in relation to J waves. A J wave was defined as either notching or a slur at the QRS terminal >0.1 mV above the isoelectric line in contiguous leads. The overall distribution pattern of VF occurrence showed 2 peaks at approximately 6:00 AM and around 8:00 PM. Nocturnal VF was observed in 20 patients (31.3%), and J waves were present in 14 of these 20 individuals (70.0%), whereas J waves were less frequent in the 44 nonnocturnal patients with VF: 16 (36.4%) (P = .0117). Among patients with J waves, nocturnal VF was observed in 46.7% with a peak at approximately 4:00 AM. Nocturnal VF was less common in patients without J waves, occurring in only 17.6% (P = .0124). Both the type and location of J waves and the pattern of the ST segment were similar between the nocturnal and nonnocturnal VF groups. J waves were associated with a VF storm and long-term arrhythmia recurrence. In IVF, the presence of J waves may characterize a higher nocturnal incidence of VF and a higher acute and chronic risk of recurrence. Copyright © 2014 Heart Rhythm Society. Published by Elsevier Inc. All rights reserved.

Evolution of stationary wave patterns in mesospheric water vapor due to climate change

NASA Astrophysics Data System (ADS)

Demirhan Barı, Deniz; Gabriel, Axel; Sezginer Ünal, Yurdanur

2016-07-01

The variability in the observed stationary wave patterns of the mesospheric water vapor (H2O) is investigated using CMIP5 RCP 4.5 and RCP 8.5 projections. The change in the vertical and meridional wave structure at northern mid- and polar latitudes associated to the zonal and meridional eddy heat fluxes is discussed by analyzing the advection of H2O due to residual wind components. The alteration in the characteristics of the stationary wave-1 pattern of the lower mesospheric H2O (up to about 75km) related to change in the projected radiative forcing is observed for the years from 2006 to 2100. Additionally the remarkable effect of the increase in global temperature on the zonal asymmetries in small-scale transient waves and parameterized gravity waves, which largely contribute to the observed stationary wave patterns of H2O in the upper mesosphere, is analyzed. For validation purposes, the derived stratospheric patterns are verified against the eddy heat fluxes and residual advection terms derived from Aura/MLS satellite data between 2004-2010 and the reference period of the CMIP5 MPI dataset (1976-2005) providing confidence in the applied method.

Computer-aided diagnosis of splenic enlargement using wave pattern of spleen in abdominal CT images

NASA Astrophysics Data System (ADS)

Seong, Won; Cho, June-Sik; Noh, Seung-Moo; Park, Jong Won

2006-03-01

It is known that the spleen accompanied by liver cirrhosis is hypertrophied or enlarged. We have examined a wave pattern at the left boundary of spleen on the abdominal CT images having liver cirrhosis, and found that they are different from those on the images having a normal liver. It is noticed that the abdominal CT images of patient with liver cirrhosis shows strong bending in the wave pattern. In the case of normal liver, the images may also have a wave pattern, but its bends are not strong. Therefore, the total waving area of the spleen with liver cirrhosis is found to be greater than that of the spleen with a normal liver. Moreover, we found that the waves of the spleen from the image with liver cirrhosis have the higher degree of circularity compared to the normal liver case. Based on the two observations above, we propose an automatic method to diagnose splenic enlargement by using the wave pattern of the spleen in abdominal CT images. The proposed automatic method improves the diagnostic performance compared with the conventional process based on the size of spleen.

Membrane-targeted WAVE mediates photoreceptor axon targeting in the absence of the WAVE complex in Drosophila

PubMed Central

Stephan, Raiko; Gohl, Christina; Fleige, Astrid; Klämbt, Christian; Bogdan, Sven

2011-01-01

A tight spatial-temporal coordination of F-actin dynamics is crucial for a large variety of cellular processes that shape cells. The Abelson interactor (Abi) has a conserved role in Arp2/3-dependent actin polymerization, regulating Wiskott-Aldrich syndrome protein (WASP) and WASP family verprolin-homologous protein (WAVE). In this paper, we report that Abi exerts nonautonomous control of photoreceptor axon targeting in the Drosophila visual system through WAVE. In abi mutants, WAVE is unstable but restored by reexpression of Abi, confirming that Abi controls the integrity of the WAVE complex in vivo. Remarkably, expression of a membrane-tethered WAVE protein rescues the axonal projection defects of abi mutants in the absence of the other subunits of the WAVE complex, whereas cytoplasmic WAVE only slightly affects the abi mutant phenotype. Thus complex formation not only stabilizes WAVE, but also provides further membrane-recruiting signals, resulting in an activation of WAVE. PMID:21900504

Soldier-in-the-Loop Target Acquisition Performance Prediction Through 2001: Integration of Perceptual and Cognitive Models

DTIC Science & Technology

2006-07-01

parameters such as motion (e.g., Meitzler, Kistner et al ., 1998), multiple observers (Rotman, 1989), scene obscurants (Rotman, Gordan, & Kowalczyk...1989), clutter (Tidhar et al ., 1994), and multiple targets (Rotman, Gordan, & Kowalczyk, 1989) and selective visual attention2. As such, it is...resolvable cycles, N, of a bar pattern (i.e., a square wave) on a target (Johnson, 1958), or complexity (e.g., Tidhar et al ., 1994). Such metrics

Huygens-Fresnel Acoustic Interference and the Development of Robust Time-Averaged Patterns from Traveling Surface Acoustic Waves

NASA Astrophysics Data System (ADS)

Devendran, Citsabehsan; Collins, David J.; Ai, Ye; Neild, Adrian

2017-04-01

Periodic pattern generation using time-averaged acoustic forces conventionally requires the intersection of counterpropagating wave fields, where suspended micro-objects in a microfluidic system collect along force potential minimizing nodal or antinodal lines. Whereas this effect typically requires either multiple transducer elements or whole channel resonance, we report the generation of scalable periodic patterning positions without either of these conditions. A single propagating surface acoustic wave interacts with the proximal channel wall to produce a knife-edge effect according to the Huygens-Fresnel principle, where these cylindrically propagating waves interfere with classical wave fronts emanating from the substrate. We simulate these conditions and describe a model that accurately predicts the lateral spacing of these positions in a robust and novel approach to acoustic patterning.

Asynchronous ripple oscillations between left and right hippocampi during slow-wave sleep

PubMed Central

Villalobos, Claudio

2017-01-01

Spatial memory, among many other brain processes, shows hemispheric lateralization. Most of the published evidence suggests that the right hippocampus plays a leading role in the manipulation of spatial information. Concurrently in the hippocampus, memory consolidation during sleep periods is one of the key steps in the formation of newly acquired spatial memory traces. One of the most characteristic oscillatory patterns in the hippocampus are sharp-wave ripple (SWR) complexes. Within this complex, fast-field oscillations or ripples have been demonstrated to be instrumental in the memory consolidation process. Since these ripples are relevant for the consolidation of memory traces associated with spatial navigation, and this process appears to be lateralized, we hypothesize that ripple events between both hippocampi would exhibit different temporal dynamics. We tested this idea by using a modified "split-hyperdrive" that allows us to record simultaneous LFPs from both right and left hippocampi of Sprague-Dawley rats during sleep. We detected individual events and found that during sleep periods these ripples exhibited a different occurrence patterns between hemispheres. Most ripple events were synchronous between intra- rather than inter-hemispherical recordings, suggesting that ripples in the hippocampus are independently generated and locally propagated within a specific hemisphere. In this study, we propose the ripples’ lack of synchrony between left and right hippocampi as the putative physiological mechanism underlying lateralization of spatial memory. PMID:28158285

Asynchronous ripple oscillations between left and right hippocampi during slow-wave sleep.

PubMed

Villalobos, Claudio; Maldonado, Pedro E; Valdés, José L

2017-01-01

Spatial memory, among many other brain processes, shows hemispheric lateralization. Most of the published evidence suggests that the right hippocampus plays a leading role in the manipulation of spatial information. Concurrently in the hippocampus, memory consolidation during sleep periods is one of the key steps in the formation of newly acquired spatial memory traces. One of the most characteristic oscillatory patterns in the hippocampus are sharp-wave ripple (SWR) complexes. Within this complex, fast-field oscillations or ripples have been demonstrated to be instrumental in the memory consolidation process. Since these ripples are relevant for the consolidation of memory traces associated with spatial navigation, and this process appears to be lateralized, we hypothesize that ripple events between both hippocampi would exhibit different temporal dynamics. We tested this idea by using a modified "split-hyperdrive" that allows us to record simultaneous LFPs from both right and left hippocampi of Sprague-Dawley rats during sleep. We detected individual events and found that during sleep periods these ripples exhibited a different occurrence patterns between hemispheres. Most ripple events were synchronous between intra- rather than inter-hemispherical recordings, suggesting that ripples in the hippocampus are independently generated and locally propagated within a specific hemisphere. In this study, we propose the ripples' lack of synchrony between left and right hippocampi as the putative physiological mechanism underlying lateralization of spatial memory.

[The extraction and analysis of a- and b- wave from electroretinogram in human].

PubMed

Chen, Zi-he; Zheng, Chang-wei; Lei, Bo

2013-12-01

To determine the frequency range of a-b wave complex in the dark- and light-adapted electroretinogram (ERG) and to isolate the pure a- and b- waves. Case series study. Full-field ERGs were recorded in 16 eyes of 8 normal volunteers from October to November 2011. Digital filtering technique was used to extract the a- and b-waves from dark- and light-adapted ERG responses. The timings of a- and b-wave were measured to determine the frequency range of a-b wave complex. Major frequency components were determined from power spectra using fast Fourier transform (FFT). The effect of different order settings in the digital filter were compared to investigate the optimum condition, where the oscillatory potential (OP) was completely removed while the amplitudes and phases of the a- and b- waves were less affected. The Student-t test was used to compare the frequency range of a-b wave complex in dark- and light-adapted ERG. The averaged frequency range of the dark-adapted a-b wave complex was from (14.99 ± 2.39) to (25.35 ± 3.77) Hz, compared with (25.22 ± 6.56) to (32.47 ± 3.68) Hz for the light-adapted a-b wave complex, respectively, indicating the frequency range of the dark-adapted a-b wave complex was significantly less than the light-adapted a-b wave complex (t = 7.910, 7.693; both P < 0.01). The third order of the digital filter and a passband of 1 to 45 Hz was the best choice in term of removing the high frequency OP from the waveform of ERG and keeping the amplitude and phase of the a- and b- waves. The frequency of a-b wave complex is lower than that of OP. Therefore the a- and b- waves can be isolated from OP using different digital filter settings in human ERG. A third order and a passband of 1 to 45 Hz is the best choice to extract pure a- and b- waves from the original ERG.

Cortical pyramidal cells as non-linear oscillators: experiment and spike-generation theory.

PubMed

Brumberg, Joshua C; Gutkin, Boris S

2007-09-26

Cortical neurons are capable of generating trains of action potentials in response to current injections. These discharges can take different forms, e.g., repetitive firing that adapts during the period of current injection or bursting behaviors. We have used a combined experimental and computational approach to characterize the dynamics leading to action potential responses in single neurons. Specifically we investigated the origin of complex firing patterns in response to sinusoidal current injections. Using a reduced model, the theta-neuron, alongside recordings from cortical pyramidal cells we show that both real and simulated neurons show phase-locking to sine wave stimuli up to a critical frequency, above which period skipping and 1-to-x phase-locking occurs. The locking behavior follows a complex "devil's staircase" phenomena, where locked modes are interleaved with irregular firing. We further show that the critical frequency depends on the time scale of spike generation and on the level of spike frequency adaptation. These results suggest that phase-locking of neuronal responses to complex input patterns can be explained by basic properties of the spike-generating machinery.

Surface waves on floating liquids induced by ultrasound field

NASA Astrophysics Data System (ADS)

Geng, D. L.; Xie, W. J.; Yan, N.; Wei, B.

2013-01-01

We demonstrate a kind of wave pattern on the surface of floating liquids in a modulated ultrasound field. The waves are related to the liquid/solid phase transformation process. The nucleation sites of the eutectics locate at the center of these waves, and the eutectic growth direction is parallel to the propagation direction of the waves. It is revealed that such wave phenomenon can be ascribed to the interaction between ultrasound and eutectic growth at the liquid/solid interface. This result may provide a potential method for fabricating wave patterned surfaces on eutectic alloys.

Patterns in the bubble-free Belousov-Zhabotinsky reaction dissolved in a microemulsion

NASA Astrophysics Data System (ADS)

Dähmlow, P.; Almeida, J.; Müller, S. C.

2016-12-01

A newly created system, namely a bubble-free Belousov-Zhabotinsky reaction embedded in a microemulsion is experimentally studied, with 1,4-cyclohexanedione used as substrate. Initially, this system shows oscillations or waves. After some minutes, waves do not form a refractory state in their wake, but the system remains excited. However, within this excited regime, a new wave emerges directly behind the initial one, causing an acceleration of the latter. The excited state lasts for several minutes. Subsequently, three different types of patterns emerge, depending on the initial chemical concentrations: wave turbulence, transient lines (TL) and an intermediate state. TL are neither Turing structures nor excitation waves. The intermediate state is a mixed pattern of TL and wave turbulence.

Paradoxical ictal EEG lateralization in children with unilateral encephaloclastic lesions.

PubMed

Garzon, Eliana; Gupta, Ajay; Bingaman, William; Sakamoto, Americo C; Lüders, Hans

2009-09-01

Describe an ictal EEG pattern of paradoxical lateralization in children with unilateral encephaloclastic hemispheric lesion acquired early in life. Of 68 children who underwent hemispherectomy during 2003-2005, scalp video-EEG and brain MRI of six children with an ictal scalp EEG pattern discordant to the clinical and imaging data were reanalyzed. Medical charts were reviewed for clinical findings and seizure outcome. Age of seizure onset was 1 day-4 years. The destructive MRI lesion was an ischemic stroke in 2, a post-infectious encephalomalacia in 2, and a perinatal trauma and hemiconvulsive-hemiplegic syndrome in one patient each. Ictal EEG pattern was characterized by prominent ictal rhythms with either 3-7 Hz spike and wave complexes or beta frequency sharp waves (paroxysmal fast) over the unaffected (contralesional) hemisphere. Scalp video-EEG was discordant, however, other findings of motor deficits (hemiparesis; five severe, one mild), seizure semiology (4/6), interictal EEG abnormalities (3/6), and unilateral burden of MRI lesion guided the decision for hemispherectomy. After 12-39 months of post-surgery follow up, five of six patients were seizure free and one has brief staring spells. We describe a paradoxical lateralization of the EEG to the "good" hemisphere in children with unihemispheric encephaloclastic lesions. This EEG pattern is compatible with seizure free outcome after surgery, provided other clinical findings and tests are concordant with origin from the abnormal hemisphere.

Coupling nonlinear optical waves to photoreactive and phase-separating soft matter: Current status and perspectives

NASA Astrophysics Data System (ADS)

Biria, Saeid; Morim, Derek R.; An Tsao, Fu; Saravanamuttu, Kalaichelvi; Hosein, Ian D.

2017-10-01

Nonlinear optics and polymer systems are distinct fields that have been studied for decades. These two fields intersect with the observation of nonlinear wave propagation in photoreactive polymer systems. This has led to studies on the nonlinear dynamics of transmitted light in polymer media, particularly for optical self-trapping and optical modulation instability. The irreversibility of polymerization leads to permanent capture of nonlinear optical patterns in the polymer structure, which is a new synthetic route to complex structured soft materials. Over time more intricate polymer systems are employed, whereby nonlinear optical dynamics can couple to nonlinear chemical dynamics, opening opportunities for self-organization. This paper discusses the work to date on nonlinear optical pattern formation processes in polymers. A brief overview of nonlinear optical phenomenon is provided to set the stage for understanding their effects. We review the accomplishments of the field on studying nonlinear waveform propagation in photopolymerizable systems, then discuss our most recent progress in coupling nonlinear optical pattern formation to polymer blends and phase separation. To this end, perspectives on future directions and areas of sustained inquiry are provided. This review highlights the significant opportunity in exploiting nonlinear optical pattern formation in soft matter for the discovery of new light-directed and light-stimulated materials phenomenon, and in turn, soft matter provides a platform by which new nonlinear optical phenomenon may be discovered.

Mimickers of generalized spike and wave discharges.

PubMed

Azzam, Raed; Bhatt, Amar B

2014-06-01

Overinterpretation of benign EEG variants is a common problem that can lead to the misdiagnosis of epilepsy. We review four normal patterns that mimic generalized spike and wave discharges: phantom spike-and-wave, hyperventilation hypersynchrony, hypnagogic/ hypnopompic hypersynchrony, and mitten patterns.

Thirty-four years of Hawaii wave hindcast from downscaling of climate forecast system reanalysis

NASA Astrophysics Data System (ADS)

Li, Ning; Cheung, Kwok Fai; Stopa, Justin E.; Hsiao, Feng; Chen, Yi-Leng; Vega, Luis; Cross, Patrick

2016-04-01

The complex wave climate of Hawaii includes a mix of seasonal swells and wind waves from all directions across the Pacific. Numerical hindcasting from surface winds provides essential space-time information to complement buoy and satellite observations for studies of the marine environment. We utilize WAVEWATCH III and SWAN (Simulating WAves Nearshore) in a nested grid system to model basin-wide processes as well as high-resolution wave conditions around the Hawaiian Islands from 1979 to 2013. The wind forcing includes the Climate Forecast System Reanalysis (CFSR) for the globe and downscaled regional winds from the Weather Research and Forecasting (WRF) model. Long-term in-situ buoy measurements and remotely-sensed wind speeds and wave heights allow thorough assessment of the modeling approach and data products for practical application. The high-resolution WRF winds, which include orographic and land-surface effects, are validated with QuickSCAT observations from 2000 to 2009. The wave hindcast reproduces the spatial patterns of swell and wind wave events detected by altimeters on multiple platforms between 1991 and 2009 as well as the seasonal variations recorded at 16 offshore and nearshore buoys around the Hawaiian Islands from 1979 to 2013. The hindcast captures heightened seas in interisland channels and around prominent headlands, but tends to overestimate the heights of approaching northwest swells and give lower estimates in sheltered areas. The validated high-resolution hindcast sets a baseline for future improvement of spectral wave models.

Linking source region and ocean wave parameters with the observed primary microseismic noise

NASA Astrophysics Data System (ADS)

Juretzek, C.; Hadziioannou, C.

2017-12-01

In previous studies, the contribution of Love waves to the primary microseismic noise field was found to be comparable to those of Rayleigh waves. However, so far only few studies analysed both wave types present in this microseismic noise band, which is known to be generated in shallow water and the theoretical understanding has mainly evolved for Rayleigh waves only. Here, we study the relevance of different source region parameters on the observed primary microseismic noise levels of Love and Rayleigh waves simultaneously. By means of beamforming and correlation of seismic noise amplitudes with ocean wave heights in the period band between 12 and 15 s, we analysed how source areas of both wave types compare with each other around Europe. The generation effectivity in different source regions was compared to ocean wave heights, peak ocean gravity wave propagation direction and bathymetry. Observed Love wave noise amplitudes correlate comparably well with near coastal ocean wave parameters as Rayleigh waves. Some coastal regions serve as especially effective sources for one or the other wave type. These coincide not only with locations of high wave heights but also with complex bathymetry. Further, Rayleigh and Love wave noise amplitudes seem to depend equally on the local ocean wave heights, which is an indication for a coupled variation with swell height during the generation of both wave types. However, the wave-type ratio varies directionally. This observation likely hints towards a spatially varying importance of different source mechanisms or structural influences. Further, the wave-type ratio is modulated depending on peak ocean wave propagation directions which could indicate a variation of different source mechanism strengths but also hints towards an imprint of an effective source radiation pattern. This emphasizes that the inclusion of both wave types may provide more constraints for the understanding of acting generation mechanisms.

The interaction of moderately strong shock waves with thick perforated walls of low porosity

NASA Technical Reports Server (NTRS)

Grant, D. J.

1972-01-01

A theoretical prediction is given of the flow through thick perforated walls of low porosity resulting from the impingement of a moderately strong traveling shock wave. The model was a flat plate positioned normal to the direction of the flow. Holes bored in the plate parallel to the direction of the flow provided nominal hole length-to-diameter ratios of 10:1 and an axial porosity of 25 percent of the flow channel cross section. The flow field behind the reflected shock wave was assumed to behave as a reservoir producing a quasi-steady duct flow through the model. Rayleigh and Fanno duct flow theoretical computations for each of three possible auxiliary wave patterns that can be associated with the transmitted shock (to satisfy contact surface compatibility) were used to provide bounding solutions as an alternative to the more complex influence coefficients method. Qualitative and quantitative behavior was verified in a 1.5- by 2.0-in. helium shock tube. High speed Schlieren photography, piezoelectric pressure-time histories, and electronic-counter wave speed measurements were used to assess the extent of correlation with the theoretical flow models. Reduced data indicated the adequacy of the bounding theory approach to predict wave phenomena and quantitative response.

Introgression Makes Waves in Inferred Histories of Effective Population Size.

PubMed

Hawks, John

2017-01-01

Human populations have a complex history of introgression and of changing population size. Human genetic variation has been affected by both these processes, so inference of past population size depends upon the pattern of gene flow and introgression among past populations. One remarkable aspect of human population history as inferred from genetics is a consistent "wave" of larger effective population sizes, found in both African and non-African populations, that appears to reflect events prior to the last 100,000 years. I carried out a series of simulations to investigate how introgression and gene flow from genetically divergent ancestral populations affect the inference of ancestral effective population size. Both introgression and gene flow from an extinct, genetically divergent population consistently produce a wave in the history of inferred effective population size. The time and amplitude of the wave reflect the time of origin of the genetically divergent ancestral populations and the strength of introgression or gene flow. These results demonstrate that even small fractions of introgression or gene flow from ancient populations may have visible effects on the inference of effective population size.

Multiple Spatial Coherence Resonances and Spatial Patterns in a Noise-Driven Heterogeneous Neuronal Network

NASA Astrophysics Data System (ADS)

Li, Yu-Ye; Ding, Xue-Li

2014-12-01

Heterogeneity of the neurons and noise are inevitable in the real neuronal network. In this paper, Gaussian white noise induced spatial patterns including spiral waves and multiple spatial coherence resonances are studied in a network composed of Morris—Lecar neurons with heterogeneity characterized by parameter diversity. The relationship between the resonances and the transitions between ordered spiral waves and disordered spatial patterns are achieved. When parameter diversity is introduced, the maxima of multiple resonances increases first, and then decreases as diversity strength increases, which implies that the coherence degrees induced by noise are enhanced at an intermediate diversity strength. The synchronization degree of spatial patterns including ordered spiral waves and disordered patterns is identified to be a very low level. The results suggest that the nervous system can profit from both heterogeneity and noise, and the multiple spatial coherence resonances are achieved via the emergency of spiral waves instead of synchronization patterns.

Sonoelastographic imaging of interference patterns for estimation of the shear velocity of homogeneous biomaterials

NASA Astrophysics Data System (ADS)

Wu, Zhe; Taylor, Lawrence S.; Rubens, Deborah J.; Parker, Kevin J.

2004-03-01

The shear wave velocity is one of a few important parameters that characterize the mechanical properties of bio-materials. In this paper, two noninvasive methods are proposed to measure the shear velocity by inspecting the shear wave interference patterns. In one method, two shear wave sources are placed on the opposite two sides of a sample, driven by the identical sinusoidal signals. The shear waves from the two sources interact to create interference patterns, which are visualized by the vibration sonoelastography technique. The spacing between the pattern bands equals half of the shear wavelength. The shear velocity can be obtained by taking the product of the wavelength and the frequency. An alternative method is to drive the two vibration sources at slightly different frequencies. In this case, the interference patterns no longer remain stationary. It is proved that the apparent velocity of the moving patterns is proportional to the shear velocity in the medium. Since the apparent velocity of the patterns can be measured by analysing the video sequence, the shear velocity can be obtained thereafter. These approaches are validated by a conventional shear wave time-of-flight approach, and they are accurate within 4% on various homogeneous tissue-mimicking phantoms.

Threshold raw retrieved contrast in coronagraphs is limited by internal polarization

NASA Astrophysics Data System (ADS)

Breckinridge, James

The objective of this work is to provide the exoplanet program with an accurate model of the coronagraph complex point spread function, methods to correct chromatic aberration in the presence of polarization aberrations, device requirements to minimize and compensate for these aberrations at levels needed for exoplanet coronagraphy, and exoplanet retrieval algorithms in the presence of polarizaiton aberrations. Currently, space based coronagraphs are designed and performance analyzed using scalar wave aberration theory. Breckinridge, Lam & Chipman (2015) PASP 127: 445-468 and Breckinridge & Oppenheimer (2004) ApJ 600: 1091-1098 showed that astronomical telescopes designed for exoplanet and precision astrometric science require polarization or vector-wave analysis. Internal instrument polarization limits both threshold raw contrast and measurements of the vector wave properties of the electromagnetic radiation from stars, exoplanets, gas and dust. The threshold raw contrast obtained using only scalar wave theory is much more optimistic than that obtained using the more hardware-realistic vector wave theory. Internal polarization reduces system contrast, increases scattered light, alters radiometric measurements, distorts diffraction-limited star images and reduces signal-to-noise ratio. For example, a vector-wave analysis shows that the WFIRST-CGI instrument will have a threshold raw contrast of 10-7 not the 10-8 forecasted using the scalar wave analysis given in the WFIRST-CGI 2015 report. The physical nature of the complex point spread function determines the exoplanet scientific yield of coronagraphs. We propose to use the Polaris-M polarization aberration ray-tracing software developed at the College of Optical Science of the University of Arizona to ray trace both a "typical" exoplanet coronagraph system as well as the WFIRST-CGI system. Threshold raw contrast and the field across the complex PSF will be calculated as a function of optical device vector E&M requirements on: 1. Lyot coronagraph mask and stop size, configuration, location and composition, 2. Uniformity of the complex reflectance of the highly reflecting metal mirrors with their dielectric overcoats, and 3. Opto-mechanical layout. Once these requirements are developed polarization aberration mitigation studies can begin to identify a practical solution to compensate polarization errors, not unlike the more developed technology of A/O compensates for pointing and manufacturing errors. Several methods to compensate for chromatic aberration in coronagraphs further compounds the complex PSF errors that require compensation to maximize the best retrieved raw contrast in the presence of exoplanets in the vicinity of stars. Internal instrument polarization introduces partial coherence into the wavefront to distort the speckle-pattern complex-field in the dark hole. An additional factor that determines retrieved raw contrast is our ability to effectively process the polarizationdistorted field within the dark hole. This study is essential to the correct calculation of exoplanet coronagraph science yield, development of requirements on subsystem devices (mirrors, stops, masks, spectrometers, wavefront error mitigation optics and opto-mechanical layout) and the development of exoplanet retrieval algorithms.

Performance Measurement Of Mel Frequency Ceptral Coefficient (MFCC) Method In Learning System Of Al- Qur’an Based In Nagham Pattern Recognition

NASA Astrophysics Data System (ADS)

Afrillia, Yesy; Mawengkang, Herman; Ramli, Marwan; Fadlisyah; Putra Fhonna, Rizky

2017-12-01

Most of research have used signal and speech processing in order to recognize makhraj pattern and tajwid reading in Al-Quran by exploring the mel frequency ceptral coefficient (MFCC). However, to our knowledge so far there is no research has been conducted to recognize the chanting of Al-Quran verse using MFCC. This term is also well-known as nagham Al-Quran. The characteristics of nagham Al-Quran pattern is much more complex then makhraj and tajwid pattern. In nagham the wave of the sound has more variation which implies the level of noice is much higher and has sound duration longer. The data testing in this research was taken term by real-time recording. The evaluation measurement in the system performance of nagham Al-Quran pattern is based on true and false detection parameter with accuracy 80%. To measure this accuracy it is necessary to modify the MFCC or to give more data learning process with more variation.

Orthogonal wave propagation of epileptiform activity in the planar mouse hippocampus in vitro.

PubMed

Kibler, Andrew B; Durand, Dominique M

2011-09-01

In vitro brain preparations have been used extensively to study the generation and propagation of epileptiform activity. Transverse and longitudinal slices of the rodent hippocampus have revealed various patterns of propagation. Yet intact connections between the transverse and longitudinal pathways should generate orthogonal (both transverse and longitudinal) propagation of seizures involving the entire hippocampus. This study utilizes the planar unfolded mouse hippocampus preparation to reveal simultaneous orthogonal epileptiform propagation and to test a method of arresting propagation. This study utilized an unfolded mouse hippocampus preparation. It was chosen due to its preservation of longitudinal neuronal processes, which are thought to play an important role in epileptiform hyperexcitability. 4-Aminopyridine (4-AP), microelectrodes, and voltage-sensitive dye imaging were employed to investigate tissue excitability. In 50-μm 4-AP, stimulation of the stratum radiatum induced transverse activation of CA3 cells but also induced a longitudinal wave of activity propagating along the CA3 region at a speed of 0.09 m/s. Without stimulation, a wave originated at the temporal CA3 and propagated in a temporal-septal direction could be suppressed with glutamatergic receptor antagonists. Orthogonal propagation traveled longitudinally along the CA3 pathway, secondarily invading the CA1 region at a velocity of 0.22 ± 0.024 m/s. Moreover, a local lesion restricted to the CA3 region could arrest wave propagation. These results reveal a complex two-dimensional epileptiform wave propagation pattern in the hippocampus that is generated by a combination of synaptic transmission and axonal propagation in the CA3 recurrent network. Epileptiform propagation block via a transverse selective CA3 lesion suggests a potential surgical technique for the treatment of temporal lobe epilepsy. Wiley Periodicals, Inc. © 2011 International League Against Epilepsy.

Orthogonal Wave Propagation of Epileptiform Activity in the Planar Mouse Hippocampus in vitro

PubMed Central

Kibler, Andrew B; Durand, Dominique M

2011-01-01

Purpose In vitro brain preparations have been used extensively to study the generation and propagation of epileptiform activity. Transverse and longitudinal slices of the rodent hippocampus have revealed various patterns of propagation. Yet intact connections between the transverse and longitudinal pathways should generate orthogonal (both transverse and longitudinal) propagation of seizures involving the entire hippocampus. This study utilizes the planar unfolded mouse hippocampus preparation to reveal simultaneous orthogonal epileptiform propagation and to test a method of arresting propagation. Methods This study utilized an unfolded mouse hippocampus preparation. It was chosen due to its preservation of longitudinal neuronal processes which are thought to play an important role in epileptiform hyper-excitability. 4-aminopyridine (4-AP), micro-electrodes, and voltage sensitive dye imaging were employed to investigate tissue excitability. Key Findings In 50 μM 4-AP, stimulation of the stratum radiatum induced transverse activation of CA3 cells but also induced a longitudinal wave of activity propagating along the CA3 region at a speed of 0.09 m/s. Without stimulation, a wave originated at the temporal CA3 and propagated in a temporal–septal direction and could be suppressed with glutamatergic antagonists. Orthogonal propagation traveled longitudinally along the CA3 pathway, secondarily invading the CA1 region at a velocity of 0.22±0.024 m/s. Moreover, a local lesion restricted to the CA3 region could arrest wave propagation. Significance These results reveal a complex two-dimensional epileptiform wave propagation pattern in the hippocampus that is generated by a combination of synaptic transmission and axonal propagation in the CA3 recurrent network. Epileptiform propagation block via a transverse selective CA3 lesion suggests a potential surgical technique for the treatment of temporal lobe epilepsy. PMID:21668440

Metabotropic glutamate receptors activate dendritic calcium waves and TRPM channels which drive rhythmic respiratory patterns in mice

PubMed Central

Mironov, S L

2008-01-01

Respiration in vertebrates is generated by a compact network which is located in the lower brainstem but cellular mechanisms which underlie persistent oscillatory activity of the respiratory network are yet unknown. Using two-photon imaging and patch-clamp recordings in functional brainstem preparations of mice containing pre-Bötzinger complex (preBötC), we examined the actions of metabotropic glutamate receptors (mGluR1/5) on the respiratory patterns. The agonist DHPG potentiated and antagonist LY367385 depressed respiration-related activities. In the inspiratory neurons, we observed rhythmic activation of non-selective channels which had a conductance of 24 pS. Their activity was enhanced with membrane depolarization and after elevation of calcium from the cytoplasmic side of the membrane. They were activated by a non-hydrolysable PIP2 analogue and blocked by flufenamate, ATP4− and Gd3+. All these properties correspond well to those of TRPM4 channels. Calcium imaging of functional slices revealed rhythmic transients in small clusters of neurons present in a network. Calcium transients in the soma were preceded by the waves in dendrites which were dependent on mGluR activation. Initiation and propagation of waves required calcium influx and calcium release from internal stores. Calcium waves activated TPRM4-like channels in the soma and promoted generation of inspiratory bursts. Simulations of activity of neurons communicated via dendritic calcium waves showed emerging activity within neuronal clusters and its synchronization between the clusters. The experimental and theoretical data provide a subcellular basis for a recently proposed group-pacemaker hypothesis and describe a novel mechanism of rhythm generation in neuronal networks. PMID:18308826

New Patterns of the Two-Dimensional Rogue Waves: (2+1)-Dimensional Maccari System

NASA Astrophysics Data System (ADS)

Wang, Gai-Hua; Wang, Li-Hong; Rao, Ji-Guang; He, Jing-Song

2017-06-01

The ocean rogue wave is one kind of puzzled destructive phenomenon that has not been understood thoroughly so far. The two-dimensional nature of this wave has inspired the vast endeavors on the recognizing new patterns of the rogue waves based on the dynamical equations with two-spatial variables and one-temporal variable, which is a very crucial step to prevent this disaster event at the earliest stage. Along this issue, we present twelve new patterns of the two-dimensional rogue waves, which are reduced from a rational and explicit formula of the solutions for a (2+1)-dimensional Maccari system. The extreme points (lines) of the first-order lumps (rogue waves) are discussed according to their analytical formulas. For the lower-order rogue waves, we show clearly in formula that parameter b 2 plays a significant role to control these patterns. Supported by the National Natural Science Foundation of China under Grant No. 11671219, the K. C. Wong Magna Fund in Ningbo University, Gai-Hua Wang is also supported by the Scientific Research Foundation of Graduate School of Ningbo University

Traveling waves in a magnetized Taylor-Couette flow.

PubMed

Liu, Wei; Goodman, Jeremy; Ji, Hantao

2007-07-01

We investigate numerically a traveling wave pattern observed in experimental magnetized Taylor-Couette flow at low magnetic Reynolds number. By accurately modeling viscous and magnetic boundaries in all directions, we reproduce the experimentally measured wave patterns and their amplitudes. Contrary to previous claims, the waves are shown to be transiently amplified disturbances launched by viscous boundary layers, rather than globally unstable magnetorotational modes.

Field patterns: a new mathematical object

PubMed Central

Mattei, Ornella

2017-01-01

Field patterns occur in space–time microstructures such that a disturbance propagating along a characteristic line does not evolve into a cascade of disturbances, but rather concentrates on a pattern of characteristic lines. This pattern is the field pattern. In one spatial direction plus time, the field patterns occur when the slope of the characteristics is, in a sense, commensurate with the space–time microstructure. Field patterns with different spatial shifts do not generally interact, but rather evolve as if they live in separate dimensions, as many dimensions as the number of field patterns. Alternatively one can view a collection as a multi-component potential, with as many components as the number of field patterns. Presumably, if one added a tiny nonlinear term to the wave equation one would then see interactions between these field patterns in the multi-dimensional space that one can consider them to live, or between the different field components of the multi-component potential if one views them that way. As a result of PT-symmetry many of the complex eigenvalues of an appropriately defined transfer matrix have unit norm and hence the corresponding eigenvectors correspond to propagating modes. There are also modes that blow up exponentially with time. PMID:28293143

Effect of WAVE2 phosphorylation on activation of the Arp2/3 complex.

PubMed

Nakanishi, Osamu; Suetsugu, Shiro; Yamazaki, Daisuke; Takenawa, Tadaomi

2007-03-01

Members of the family of WASP-family Verprolin homologous proteins (WAVEs) activate the Arp2/3 complex to induce actin polymerization. The WAVE family comprises three proteins, namely, WAVE1, WAVE2 and WAVE3. Among them, WAVE2 is crucial for activation of the Arp2/3 complex for the formation of branched actin filaments in lamellipodia. Activation of mitogen-activated protein (MAP) kinase signalling results in the phosphorylation of the WAVE family proteins; however, which of the three WAVE proteins is phosphorylated is unclear. We found that in vitro WAVE2 is directly phosphorylated by a MAP kinase, i.e. extracellular signal-regulated kinase (ERK) 2. The proline-rich region and the verprolin, cofilin and acidic (VCA) region of WAVE2 were phosphorylated. Interestingly, the phosphorylated VCA region had a higher affinity for the Arp2/3 complex. However, the phosphorylation of the VCA region resulted in reduced induction of Arp2/3-mediated actin polymerization in vitro. The role of the phosphorylation of the proline-rich region was not determined.

Spatiotemporal Patterns of Noise-Driven Confined Actin Waves in Living Cells.

PubMed

Bernitt, Erik; Döbereiner, Hans-Günther

2017-01-27

Cells utilize waves of polymerizing actin to reshape their morphologies, which is central to physiological and pathological processes alike. Here, we force dorsal actin waves to propagate on one-dimensional domains with periodic boundary conditions, which results in striking spatiotemporal patterns with a clear signature of noise-driven dynamics. We show that these patterns can be very closely reproduced with a noise-driven active medium at coherence resonance.

Spatial patterns of fasting and fed antropyloric pressure waves in humans.

PubMed Central

Sun, W M; Hebbard, G S; Malbert, C H; Jones, K L; Doran, S; Horowitz, M; Dent, J

1997-01-01

1. Gastric mechanics were investigated by categorizing the temporal and spatial patterning of pressure waves associated with individual gastric contractions. 2. In twelve healthy volunteers, intraluminal pressures were monitored from nine side hole recording points spaced at 1.5 cm intervals along the antrum, pylorus and duodenum. 3. Pressure wave sequences that occurred during phase II fasting contractions (n = 221) and after food (n = 778) were evaluated. 4. The most common pattern of pressure wave onset along the antrum was a variable combination of antegrade, synchronous and retrograde propagation between side hole pairs. This variable pattern accounted for 42% of sequences after food, and 34% during fasting (P < 0.05). Other common pressure wave sequence patterns were: purely antegrade-29% after food and 42% during fasting (P < 0.05); purely synchronous-23% fed and 17% fasting; and purely retrograde-6% fed and 8% fasting. The length of sequences was shorter after food (P < 0.05). Some sequences 'skipped' individual recording points. 5. The spatial patterning of gastric pressure wave sequences is diverse, and may explain the differing mechanical outcomes among individual gastric contractions. 6. Better understanding of gastric mechanics may be gained from temporally precise correlations of luminal flows and pressures and gastric wall motion during individual gastric contraction sequences. PMID:9306286

Thin-film Faraday patterns in three dimensions

NASA Astrophysics Data System (ADS)

Richter, Sebastian; Bestehorn, Michael

2017-04-01

We investigate the long time evolution of a thin fluid layer in three spatial dimensions located on a horizontal planar substrate. The substrate is subjected to time-periodic external vibrations in normal and in tangential direction with respect to the plane surface. The governing partial differential equation system of our model is obtained from the incompressible Navier-Stokes equations considering the limit of a thin fluid geometry and using the long wave lubrication approximation. It includes inertia and viscous friction. Numerical simulations evince the existence of persistent spatially complex surface patterns (periodic and quasiperiodic) for certain superpositions of two vertical excitations and initial conditions. Additional harmonic lateral excitations cause deformations but retain the basic structure of the patterns. Horizontal ratchet-shaped forces lead to a controllable lateral movement of the fluid. A Floquet analysis is used to determine the stability of the linearized system.

A global traveling wave on Venus

NASA Technical Reports Server (NTRS)

Smith, Michael D.; Gierasch, Peter J.; Schinder, Paul J.

1993-01-01

The dominant large-scale pattern in the clouds of Venus has been described as a 'Y' or 'Psi' and tentatively identified by earlier workers as a Kelvin wave. A detailed calculation of linear wave modes in the Venus atmosphere verifies this identification. Cloud feedback by infrared heating fluctuations is a plausible excitation mechanism. Modulation of the large-scale pattern by the wave is a possible explanation for the Y. Momentum transfer by the wave could contribute to sustaining the general circulation.

Arctic Climate and Atmospheric Planetary Waves

NASA Technical Reports Server (NTRS)

Cavalieri, D. J.; Haekkinen, S.

2000-01-01

Analysis of a fifty-year record (1946-1995) of monthly-averaged sea level pressure data provides a link between the phases of planetary-scale sea level pressure waves and Arctic Ocean and ice variability. Results of this analysis show: (1) a breakdown of the dominant wave I pattern in the late 1960's, (2) shifts in the mean phase of waves 1 and 2 since this breakdown, (3) an eastward shift in the phases of both waves 1 and 2 during the years of simulated cyclonic Arctic Ocean circulation relative to their phases during the years of anticyclonic circulation, (4) a strong decadal variability of wave phase associated with simulated Arctic Ocean circulation changes. Finally, the Arctic atmospheric circulation patterns that emerge when waves 1 and 2 are in their extreme eastern and western positions suggest an alternative approach to determine significant forcing patterns of sea ice and high-latitude variability.

Inducing rostrum interfacial waves by fluid-solid coupling in a Chinese river dolphin (Lipotes vexillifer )

NASA Astrophysics Data System (ADS)

Song, Zhongchang; Zhang, Yu; Wei, Chong; Wang, Xianyan

2016-01-01

Through numerically solving the appropriate wave equations, propagation of biosonar signals in a Chinese river dolphin (baiji) was studied. The interfacial waves along the rostrum-tissue interfaces, including both compressional (longitudinal) and shear (transverse) waves in the solid rostrum through fluid-solid coupling were examined. The baiji's rostrum was found to effect acoustic beam formation not only as an interfacial wave generator but also as a sound reflector. The wave propagation patterns in the solid rostrum were found to significantly change the wave movement through the bone. Vibrations in the rostrum, expressed in solid displacement, initially increased but eventually decreased from posterior to anterior sides, indicating a complex physical process. Furthermore, the comparisons among seven cases, including the combination of (1) the rostrum, melon, and air sacs; (2) rostrum-air sacs; (3) rostrum-melon; (4) only rostrum; (5) air sacs-melon; (6) only air sacs; and (7) only melon revealed that the cases including the rostrum were better able to approach the complete system by inducing rostrum-tissue interfacial waves and reducing the differences in main beam angle and -3 dB beam width. The interfacial waves in the rostrum were considered complementary with reflection to determine the obbligato role of the rostrum in the baiji's biosonar emission. The far-field beams formed from complete fluid-solid models and non-fluid-solid models were compared to reveal the effects brought by the consideration of shear waves of the solid structures of the baiji. The results may provide useful information for further understanding the role of the rostrum in this odontocete species.

Inducing rostrum interfacial waves by fluid-solid coupling in a Chinese river dolphin (Lipotesvexillifer).

PubMed

Song, Zhongchang; Zhang, Yu; Wei, Chong; Wang, Xianyan

2016-01-01

Through numerically solving the appropriate wave equations, propagation of biosonar signals in a Chinese river dolphin (baiji) was studied. The interfacial waves along the rostrum-tissue interfaces, including both compressional (longitudinal) and shear (transverse) waves in the solid rostrum through fluid-solid coupling were examined. The baiji's rostrum was found to effect acoustic beam formation not only as an interfacial wave generator but also as a sound reflector. The wave propagation patterns in the solid rostrum were found to significantly change the wave movement through the bone. Vibrations in the rostrum, expressed in solid displacement, initially increased but eventually decreased from posterior to anterior sides, indicating a complex physical process. Furthermore, the comparisons among seven cases, including the combination of (1) the rostrum, melon, and air sacs; (2) rostrum-air sacs; (3) rostrum-melon; (4) only rostrum; (5) air sacs-melon; (6) only air sacs; and (7) only melon revealed that the cases including the rostrum were better able to approach the complete system by inducing rostrum-tissue interfacial waves and reducing the differences in main beam angle and -3 dB beam width. The interfacial waves in the rostrum were considered complementary with reflection to determine the obbligato role of the rostrum in the baiji's biosonar emission. The far-field beams formed from complete fluid-solid models and non-fluid-solid models were compared to reveal the effects brought by the consideration of shear waves of the solid structures of the baiji. The results may provide useful information for further understanding the role of the rostrum in this odontocete species.

Optical fabrication of large area photonic microstructures by spliced lens

NASA Astrophysics Data System (ADS)

Jin, Wentao; Song, Meng; Zhang, Xuehua; Yin, Li; Li, Hong; Li, Lin

2018-05-01

We experimentally demonstrate a convenient approach to fabricate large area photorefractive photonic microstructures by a spliced lens device. Large area two-dimensional photonic microstructures are optically induced inside an iron-doped lithium niobate crystal. The experimental setups of our method are relatively compact and stable without complex alignment devices. It can be operated in almost any optical laboratories. We analyze the induced triangular lattice microstructures by plane wave guiding, far-field diffraction pattern imaging and Brillouin-zone spectroscopy. By designing the spliced lens appropriately, the method can be easily extended to fabricate other complex large area photonic microstructures, such as quasicrystal microstructures. Induced photonic microstructures can be fixed or erased and re-recorded in the photorefractive crystal.

Characteristics of seismic waves composing Hawaiian volcanic tremor and gas-piston events observed by a near-source array

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ferrazzini, V.; Aki, K.; Chouet, B.

1991-04-10

A correlation method, specifically designed for describing the characteristics of a complex wave field, is applied to volcanic tremor and gas-piston events recorded by a semicircular array of GEOS instruments set at the foot of the Puu Oo crater on the east rift of Kilauea volcano, Hawaii. The spatial patterns of correlation coefficients obtained as functions of frequency for the three components of motion over the entire array are similar for gas-piston events and tremor, and clearly depict dispersive waves propagating across the array from the direction of Puu Oo. The wave fields are composed of comparable amounts of Rayleighmore » and Love waves propagating with similar and extremely slow phase velocities ranging from 700 m/s at 2 Hz to 300 m/s at 8 Hz. The results from Puu Oo stand in sharp contrast to those obtained in an experiment conducted in 1976 on the partially solidified lava lake of Kilauea Iki. Rayleigh waves were not observed in Kilauea Iki, but well-developed trains of Love waves were seen to propagate there with velocities twice as high as those observed near Puu Oo. These differences in the propagation characteristics of surface waves at the two sites may be attributed to the presence of a soft horizontal layer of molten rock in Kilauea Iki, which may have lowered the phase velocity of Rayleigh waves more drastically than that of Love waves, resulting in severe scattering of the Rayleigh wave mode. On the other hand, the thin superficial pahoehoe flow under the array at Puu Oo may have favored the development of vertical columnar joints more extensively at this location than at Kilauea Iki, which may have reduced the shear moduli controlling Love wave mode.« less

Stress wave velocity patterns in the longitudinal-radial plane of trees for defect diagnosis

Treesearch

Guanghui Li; Xiang Weng; Xiaocheng Du; Xiping Wang; Hailin Feng

2016-01-01

Acoustic tomography for urban tree inspection typically uses stress wave data to reconstruct tomographic images for the trunk cross section using interpolation algorithm. This traditional technique does not take into account the stress wave velocity patterns along tree height. In this study, we proposed an analytical model for the wave velocity in the longitudinal–...

Predicting spiral wave patterns from cell properties in a model of biological self-organization.

PubMed

Geberth, Daniel; Hütt, Marc-Thorsten

2008-09-01

In many biological systems, biological variability (i.e., systematic differences between the system components) can be expected to outrank statistical fluctuations in the shaping of self-organized patterns. In principle, the distribution of single-element properties should thus allow predicting features of such patterns. For a mathematical model of a paradigmatic and well-studied pattern formation process, spiral waves of cAMP signaling in colonies of the slime mold Dictyostelium discoideum, we explore this possibility and observe a pronounced anticorrelation between spiral waves and cell properties (namely, the firing rate) and particularly a clustering of spiral wave tips in regions devoid of spontaneously firing (pacemaker) cells. Furthermore, we observe local inhomogeneities in the distribution of spiral chiralities, again induced by the pacemaker distribution. We show that these findings can be explained by a simple geometrical model of spiral wave generation.

Predicting spiral wave patterns from cell properties in a model of biological self-organization

NASA Astrophysics Data System (ADS)

Geberth, Daniel; Hütt, Marc-Thorsten

2008-09-01

In many biological systems, biological variability (i.e., systematic differences between the system components) can be expected to outrank statistical fluctuations in the shaping of self-organized patterns. In principle, the distribution of single-element properties should thus allow predicting features of such patterns. For a mathematical model of a paradigmatic and well-studied pattern formation process, spiral waves of cAMP signaling in colonies of the slime mold Dictyostelium discoideum, we explore this possibility and observe a pronounced anticorrelation between spiral waves and cell properties (namely, the firing rate) and particularly a clustering of spiral wave tips in regions devoid of spontaneously firing (pacemaker) cells. Furthermore, we observe local inhomogeneities in the distribution of spiral chiralities, again induced by the pacemaker distribution. We show that these findings can be explained by a simple geometrical model of spiral wave generation.

Patterns of Alloy Deformation by Pulsed Pressure

NASA Astrophysics Data System (ADS)

Chebotnyagin, L. M.; Potapov, V. V.; Lopatin, V. V.

2015-06-01

Patterns of alloy deformation for optimization of a welding regime are studied by the method of modeling and deformation profiles providing high deformation quality are determined. A model of stepwise kinetics of the alloy deformation by pulsed pressure from the expanding plasma channel inside of a deformable cylinder is suggested. The model is based on the analogy between the acoustic and electromagnetic wave processes in long lines. The shock wave pattern of alloy deformation in the presence of multiple reflections of pulsed pressure waves in the gap plasma channel - cylinder wall and the influence of unloading waves from free surfaces are confirmed.

Faraday wave lattice as an elastic metamaterial.

PubMed

Domino, L; Tarpin, M; Patinet, S; Eddi, A

2016-05-01

Metamaterials enable the emergence of novel physical properties due to the existence of an underlying subwavelength structure. Here, we use the Faraday instability to shape the fluid-air interface with a regular pattern. This pattern undergoes an oscillating secondary instability and exhibits spontaneous vibrations that are analogous to transverse elastic waves. By locally forcing these waves, we fully characterize their dispersion relation and show that a Faraday pattern presents an effective shear elasticity. We propose a physical mechanism combining surface tension with the Faraday structured interface that quantitatively predicts the elastic wave phase speed, revealing that the liquid interface behaves as an elastic metamaterial.

Hydrodynamics of Turning Flocks.

PubMed

Yang, Xingbo; Marchetti, M Cristina

2015-12-18

We present a hydrodynamic model of flocking that generalizes the familiar Toner-Tu equations to incorporate turning inertia of well-polarized flocks. The continuum equations controlled by only two dimensionless parameters, orientational inertia and alignment strength, are derived by coarse-graining the inertial spin model recently proposed by Cavagna et al. The interplay between orientational inertia and bend elasticity of the flock yields anisotropic spin waves that mediate the propagation of turning information throughout the flock. The coupling between spin-current density to the local vorticity field through a nonlinear friction gives rise to a hydrodynamic mode with angular-dependent propagation speed at long wavelengths. This mode becomes unstable as a result of the growth of bend and splay deformations augmented by the spin wave, signaling the transition to complex spatiotemporal patterns of continuously turning and swirling flocks.

Cross-diffusion-induced subharmonic spatial resonances in a predator-prey system

NASA Astrophysics Data System (ADS)

Gambino, G.; Lombardo, M. C.; Sammartino, M.

2018-01-01

In this paper we investigate the complex dynamics originated by a cross-diffusion-induced subharmonic destabilization of the fundamental subcritical Turing mode in a predator-prey reaction-diffusion system. The model we consider consists of a two-species Lotka-Volterra system with linear diffusion and a nonlinear cross-diffusion term in the predator equation. The taxis term in the search strategy of the predator is responsible for the onset of complex dynamics. In fact, our model does not exhibit any Hopf or wave instability, and on the basis of the linear analysis one should only expect stationary patterns; nevertheless, the presence of the nonlinear cross-diffusion term is able to induce a secondary instability: due to a subharmonic spatial resonance, the stationary primary branch bifurcates to an out-of-phase oscillating solution. Noticeably, the strong resonance between the harmonic and the subharmonic is able to generate the oscillating pattern albeit the subharmonic is below criticality. We show that, as the control parameter is varied, the oscillating solution (sub T mode) can undergo a sequence of secondary instabilities, generating a transition toward chaotic dynamics. Finally, we investigate the emergence of sub T -mode solutions on two-dimensional domains: when the fundamental mode describes a square pattern, subharmonic resonance originates oscillating square patterns. In the case of subcritical Turing hexagon solutions, the internal interactions with a subharmonic mode are able to generate the so-called "twinkling-eyes" pattern.

The quinary pattern of blast injury.

PubMed

Kluger, Yoram; Nimrod, Adi; Biderman, Philippe; Mayo, Ami; Sorkin, Patric

2007-01-01

Bombing is the primary weapon of global terrorism, and it results in a complicated, multidimensional injury pattern. It induces bodily injuries through the well-documented primary, secondary, tertiary, and quaternary mechanisms of blast. Their effects dictate special medical concern and timely implementation of diagnostic and management strategies. Our objective is to report on clinical observations of patients admitted to the Tel Aviv Medical Center following a terrorist bombing. The explosion injured 27 patients, and three died. Four survivors who had been in close proximity to the explosion, as indicated by their eardrum perforation and additional blast injuries, were exposed to the blast wave. They exhibited a unique and immediate hyperinflammatory state, two upon admission to the intensive care unit and two during surgery. This hyperinflammatory state manifested as hyperpyrexia, sweating, low central venous pressure, and positive fluid balance. This state did not correlate with the complexity of injuries sustained by any of the 67 patients admitted to the intensive care unit after previous bombings. The patients' hyperinflammatory behavior, unrelated to their injury complexity and severity of trauma, indicates a new injury pattern in explosions, termed the "quinary blast injury pattern." Unconventional materials used in the manufacture of the explosive can partly explain the observed early hyperinflammatory state. Medical personnel caring for blast victims should be aware of this new type of bombing injury.

On structural health monitoring of aircraft adhesively bonded repairs

NASA Astrophysics Data System (ADS)

Pavlopoulou, Sofia

The recent interest in life extension of ageing aircraft and the need to address the repair challenges in the new age composite ones, led to the investigation of new repair methodologies such as adhesively bonded repair patches. The present thesis focuses on structural health monitoring aspects of the repairs, evaluating their performance with guided ultrasonic waves aiming to develop a monitoring strategy which would eliminate unscheduled maintenance and unnecessary inspection costs. To address the complex nature of the wave propagation phenomena, a finite element based model identified the existing challenges by exploring the interaction of the excitation waves with different levels of damage. The damage sensitivity of the first anti-symmetric mode was numerically investigated. An external bonded patch and a scarf repair, were further tested in static and dynamic loadings, and their performance was monitored with Lamb waves, excited by surface-bonded piezoelectric transducers.. The response was processed by means of advanced pattern recognition and data dimension reduction techniques such as novelty detection and principal component analysis. An optimisation of these tools enabled an accurate damage detection under complex conditions. The phenomena of mode isolation and precise arrival time determination under a noisy environment and the problem of inadequate training data were investigated and solved through appropriate transducer arrangements and advanced signal processing respectively. The applicability of the established techniques was demonstrated on an aluminium repaired helicopter tail stabilizer. Each case study utilised alternative non-destructive techniques for validation such as 3D digital image correlation, X-ray radiography and thermography. Finally a feature selection strategy was developed through the analysis of the instantaneous properties of guided waves for damage detection purposes..

Excitation of nonlinear wave patterns in flowing complex plasmas

NASA Astrophysics Data System (ADS)

Jaiswal, S.; Bandyopadhyay, P.; Sen, A.

2018-01-01

We describe experimental observations of nonlinear wave structures excited by a supersonic mass flow of dust particles over an electrostatic potential hill in a dusty plasma medium. The experiments have been carried out in a Π- shaped experimental (DPEx) device in which micron sized Kaolin particles are embedded in a DC glow discharge Argon plasma. An equilibrium dust cloud is formed by maintaining the pumping speed and gas flow rate and the dust flow is induced either by suddenly reducing the height of a potential hill or by suddenly reducing the gas flow rate. For a supersonic flow of the dust fluid precursor solitons are seen to propagate in the upstream direction while wake structures propagate in the downstream direction. For flow speeds with a Mach number greater than 2 the dust particles flowing over the potential hill give rise to dispersive dust acoustic shock waves. The experimental results compare favorably with model theories based on forced K-dV and K-dV Burger's equations.

Free Motion Scanning System

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sword, Charles K.

The present invention relates to an ultrasonic scanner and method for the imaging of a part surface, the scanner comprising: a probe assembly spaced apart from the surface including at least two tracking signals for emitting electromagnetic radiation and a transmitter for emitting ultrasonic waves onto a surface in order to induce at least a portion of said waves to be reflected from the surface, at least one detector for receiving the electromagnetic radiation wherein the detector is positioned to receive said radiation from the tracking signals, an analyzing means for recognizing a three-dimensional location of the tracking signals basedmore » on said emitted electromagnetic radiation, a differential conversion means for generating an output signal representative of the waveform of the reflected waves, and a means for relating said tracking signal location with the output signal and projecting an image of the resulting data. The scanner and method are particularly useful to acquire ultrasonic inspection data by scanning the probe-over a complex part surface in an arbitrary scanning pattern.« less

Free motion scanning system

DOEpatents

Sword, Charles K.

2000-01-01

The present invention relates to an ultrasonic scanner system and method for the imaging of a part system, the scanner comprising: a probe assembly spaced apart from the surface of the part including at least two tracking signals for emitting radiation and a transmitter for emitting ultrasonic waves onto a surface in order to induce at least a portion of the waves to be reflected from the part, at least one detector for receiving the radiation wherein the detector is positioned to receive the radiation from the tracking signals, an analyzer for recognizing a three-dimensional location of the tracking signals based on the emitted radiation, a differential converter for generating an output signal representative of the waveform of the reflected waves, and a device such as a computer for relating said tracking signal location with the output signal and projecting an image of the resulting data. The scanner and method are particularly useful to acquire ultrasonic inspection data by scanning the probe over a complex part surface in an arbitrary scanning pattern.

Hydrocode and Molecular Dynamics modelling of uniaxial shock wave experiments on Silicon

NASA Astrophysics Data System (ADS)

Stubley, Paul; McGonegle, David; Patel, Shamim; Suggit, Matthew; Wark, Justin; Higginbotham, Andrew; Comley, Andrew; Foster, John; Rothman, Steve; Eggert, Jon; Kalantar, Dan; Smith, Ray

2015-06-01

Recent experiments have provided further evidence that the response of silicon to shock compression has anomalous properties, not described by the usual two-wave elastic-plastic response. A recent experimental campaign on the Orion laser in particular has indicated a complex multi-wave response. While Molecular Dynamics (MD) simulations can offer a detailed insight into the response of crystals to uniaxial compression, they are extremely computationally expensive. For this reason, we are adapting a simple quasi-2D hydrodynamics code to capture phase change under uniaxial compression, and the intervening mixed phase region, keeping track of the stresses and strains in each of the phases. This strain information is of such importance because a large number of shock experiments use diffraction as a key diagnostic, and these diffraction patterns depend solely on the elastic strains in the sample. We present here a comparison of the new hydrodynamics code with MD simulations, and show that the simulated diffraction taken from the code agrees qualitatively with measured diffraction from our recent Orion campaign.

Stability of Nonlinear Wave Patterns to the Bipolar Vlasov-Poisson-Boltzmann System

NASA Astrophysics Data System (ADS)

Li, Hailiang; Wang, Yi; Yang, Tong; Zhong, Mingying

2018-04-01

The main purpose of the present paper is to investigate the nonlinear stability of viscous shock waves and rarefaction waves for the bipolar Vlasov-Poisson-Boltzmann (VPB) system. To this end, motivated by the micro-macro decomposition to the Boltzmann equation in Liu and Yu (Commun Math Phys 246:133-179, 2004) and Liu et al. (Physica D 188:178-192, 2004), we first set up a new micro-macro decomposition around the local Maxwellian related to the bipolar VPB system and give a unified framework to study the nonlinear stability of the basic wave patterns to the system. Then, as applications of this new decomposition, the time-asymptotic stability of the two typical nonlinear wave patterns, viscous shock waves and rarefaction waves are proved for the 1D bipolar VPB system. More precisely, it is first proved that the linear superposition of two Boltzmann shock profiles in the first and third characteristic fields is nonlinearly stable to the 1D bipolar VPB system up to some suitable shifts without the zero macroscopic mass conditions on the initial perturbations. Then the time-asymptotic stability of the rarefaction wave fan to compressible Euler equations is proved for the 1D bipolar VPB system. These two results are concerned with the nonlinear stability of wave patterns for Boltzmann equation coupled with additional (electric) forces, which together with spectral analysis made in Li et al. (Indiana Univ Math J 65(2):665-725, 2016) sheds light on understanding the complicated dynamic behaviors around the wave patterns in the transportation of charged particles under the binary collisions, mutual interactions, and the effect of the electrostatic potential forces.

A novel role for WAVE1 in controlling actin network growth rate and architecture

PubMed Central

Sweeney, Meredith O.; Collins, Agnieszka; Padrick, Shae B.; Goode, Bruce L.

2015-01-01

Branched actin filament networks in cells are assembled through the combined activities of Arp2/3 complex and different WASP/WAVE proteins. Here we used TIRF and electron microscopy to directly compare for the first time the assembly kinetics and architectures of actin filament networks produced by Arp2/3 complex and dimerized VCA regions of WAVE1, WAVE2, or N-WASP. WAVE1 produced strikingly different networks from WAVE2 or N-WASP, which comprised unexpectedly short filaments. Further analysis showed that the WAVE1-specific activity stemmed from an inhibitory effect on filament elongation both in the presence and absence of Arp2/3 complex, which was observed even at low stoichiometries of WAVE1 to actin monomers, precluding an effect from monomer sequestration. Using a series of VCA chimeras, we mapped the elongation inhibitory effects of WAVE1 to its WH2 (“V”) domain. Further, mutating a single conserved lysine residue potently disrupted WAVE1's inhibitory effects. Taken together, our results show that WAVE1 has unique activities independent of Arp2/3 complex that can govern both the growth rates and architectures of actin filament networks. Such activities may underlie previously observed differences between the cellular functions of WAVE1 and WAVE2. PMID:25473116

Spatial Heterogeneity and Imperfect Mixing in Chemical Reactions: Visualization of Density-Driven Pattern Formation

DOE PAGES

Sobel, Sabrina G.; Hastings, Harold M.; Testa, Matthew

2009-01-01

Imore » mperfect mixing is a concern in industrial processes, everyday processes (mixing paint, bread machines), and in understanding salt water-fresh water mixing in ecosystems. The effects of imperfect mixing become evident in the unstirred ferroin-catalyzed Belousov-Zhabotinsky reaction, the prototype for chemical pattern formation. Over time, waves of oxidation (high ferriin concentration, blue) propagate into a background of low ferriin concentration (red); their structure reflects in part the history of mixing in the reaction vessel. However, it may be difficult to separate mixing effects from reaction effects. We describe a simpler model system for visualizing density-driven pattern formation in an essentially unmixed chemical system: the reaction of pale yellow Fe 3 + with colorless SCN − to form the blood-red Fe ( SCN ) 2 + complex ion in aqueous solution. Careful addition of one drop of Fe ( NO 3 ) 3 to KSCN yields striped patterns after several minutes. The patterns appear reminiscent of Rayleigh-Taylor instabilities and convection rolls, arguing that pattern formation is caused by density-driven mixing.« less

Spatial Heterogeneity and Imperfect Mixing in Chemical Reactions: Visualization of Density-Driven Pattern Formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sobel, Sabrina G.; Hastings, Harold M.; Testa, Matthew

Imore » mperfect mixing is a concern in industrial processes, everyday processes (mixing paint, bread machines), and in understanding salt water-fresh water mixing in ecosystems. The effects of imperfect mixing become evident in the unstirred ferroin-catalyzed Belousov-Zhabotinsky reaction, the prototype for chemical pattern formation. Over time, waves of oxidation (high ferriin concentration, blue) propagate into a background of low ferriin concentration (red); their structure reflects in part the history of mixing in the reaction vessel. However, it may be difficult to separate mixing effects from reaction effects. We describe a simpler model system for visualizing density-driven pattern formation in an essentially unmixed chemical system: the reaction of pale yellow Fe 3 + with colorless SCN − to form the blood-red Fe ( SCN ) 2 + complex ion in aqueous solution. Careful addition of one drop of Fe ( NO 3 ) 3 to KSCN yields striped patterns after several minutes. The patterns appear reminiscent of Rayleigh-Taylor instabilities and convection rolls, arguing that pattern formation is caused by density-driven mixing.« less

Self-Induced Switchings between Multiple Space-Time Patterns on Complex Networks of Excitable Units

NASA Astrophysics Data System (ADS)

Ansmann, Gerrit; Lehnertz, Klaus; Feudel, Ulrike

2016-01-01

We report on self-induced switchings between multiple distinct space-time patterns in the dynamics of a spatially extended excitable system. These switchings between low-amplitude oscillations, nonlinear waves, and extreme events strongly resemble a random process, although the system is deterministic. We show that a chaotic saddle—which contains all the patterns as well as channel-like structures that mediate the transitions between them—is the backbone of such a pattern-switching dynamics. Our analyses indicate that essential ingredients for the observed phenomena are that the system behaves like an inhomogeneous oscillatory medium that is capable of self-generating spatially localized excitations and that is dominated by short-range connections but also features long-range connections. With our findings, we present an alternative to the well-known ways to obtain self-induced pattern switching, namely, noise-induced attractor hopping, heteroclinic orbits, and adaptation to an external signal. This alternative way can be expected to improve our understanding of pattern switchings in spatially extended natural dynamical systems like the brain and the heart.

Feedbacks Between Wave Energy And Declining Coral Reef Structure: Implications For Coastal Morphodynamics

NASA Astrophysics Data System (ADS)

Grady, A. E.; Jenkins, C. J.; Moore, L. J.; Potts, D. C.; Burgess, P. M.; Storlazzi, C. D.; Elias, E.; Reidenbach, M. A.

2013-12-01

The incident wave energy dissipated by the structural complexity and bottom roughness of coral reef ecosystems, and the carbonate sediment produced by framework-building corals, provide natural shoreline protection and nourishment, respectively. Globally, coral reef ecosystems are in decline as a result of ocean warming and acidification, which is exacerbated by chronic regional stressors such as pollution and disease. As a consequence of declining reef health, many reef ecosystems are experiencing reduced coral cover and shifts to dominance by macroalgae, resulting in a loss of rugosity and thus hydrodynamic roughness. As coral reef architecture is compromised and carbonate skeletons are eroded, wave energy dissipation and sediment transport patterns--along with the carbonate sediment budget of the coastal environment--may be altered. Using a Delft3D numerical model of the south-central Molokai, Hawaii, fringing reef, we simulate the effects of changing reef states on wave energy and sediment transport. To determine the temporally-varying effects of biotic and abiotic stressors such as storms and bleaching on the reef structure and carbonate production, we couple Delft3D with CarboLOT, a model that simulates growth and competition of carbonate-producing organisms. CarboLOT is driven by the Lotka-Volterra population ecology equations and niche suitability principles, and accesses the CarboKB database for region-specific, carbonate-producing species information on growth rates, reproduction patterns, habitat suitability, as well as organism geometries. Simulations assess how changing reef states--which alter carbonate sediment production and reef morphology and thus hydrodynamic roughness--impact wave attenuation and sediment transport gradients along reef-fronted beaches. Initial results suggest that along fringing reefs having characteristics similar to the Molokai fringing reef, projected sea level rise will likely outpace coral reef accretion, and the increased residual wave energy transported to the coast may result in the alteration of alongshore sediment transport gradients and substantial changes to coastal morphology.

Coral reef structural complexity provides important coastal protection from waves under rising sea levels.

PubMed

Harris, Daniel L; Rovere, Alessio; Casella, Elisa; Power, Hannah; Canavesio, Remy; Collin, Antoine; Pomeroy, Andrew; Webster, Jody M; Parravicini, Valeriano

2018-02-01

Coral reefs are diverse ecosystems that support millions of people worldwide by providing coastal protection from waves. Climate change and human impacts are leading to degraded coral reefs and to rising sea levels, posing concerns for the protection of tropical coastal regions in the near future. We use a wave dissipation model calibrated with empirical wave data to calculate the future increase of back-reef wave height. We show that, in the near future, the structural complexity of coral reefs is more important than sea-level rise in determining the coastal protection provided by coral reefs from average waves. We also show that a significant increase in average wave heights could occur at present sea level if there is sustained degradation of benthic structural complexity. Our results highlight that maintaining the structural complexity of coral reefs is key to ensure coastal protection on tropical coastlines in the future.

Coral reef structural complexity provides important coastal protection from waves under rising sea levels

PubMed Central

Harris, Daniel L.; Rovere, Alessio; Casella, Elisa; Power, Hannah; Canavesio, Remy; Collin, Antoine; Pomeroy, Andrew; Webster, Jody M.; Parravicini, Valeriano

2018-01-01

Coral reefs are diverse ecosystems that support millions of people worldwide by providing coastal protection from waves. Climate change and human impacts are leading to degraded coral reefs and to rising sea levels, posing concerns for the protection of tropical coastal regions in the near future. We use a wave dissipation model calibrated with empirical wave data to calculate the future increase of back-reef wave height. We show that, in the near future, the structural complexity of coral reefs is more important than sea-level rise in determining the coastal protection provided by coral reefs from average waves. We also show that a significant increase in average wave heights could occur at present sea level if there is sustained degradation of benthic structural complexity. Our results highlight that maintaining the structural complexity of coral reefs is key to ensure coastal protection on tropical coastlines in the future. PMID:29503866

Hyperthermia apparatus

DOEpatents

Larsen, Lawrence E.

2000-01-01

A hyperthermia apparatus, suitable for transurethral application, has an energy radiating element comprising a leaky-wave antenna. The leaky wave antenna radiation pattern is characterized by a surface wave which propagates along an aperture formed by openings (small in comparison to a wavelength) in the outer conductor of a transmission line. Appropriate design of the leaky wave antenna produces a uniform, broadside pattern of temperature elevation that uniformly heats all or part of the periurethral tissues.

Factors Influencing Army Accessions.

DTIC Science & Technology

1982-12-01

partial autocorrelations were examined for significant lags or a recognizable pattern such as a damped exponential or a sine wave. The TSP prugrams...decreasing function indicating nonstation- *arity or a very long sine wave where only a small portion of the wave is plotted. The partial...plot of the raw data appeared (Appendix E-1) to be either the middle of a long sine wave or a linearly decreasing function. This pattern is recognized

ESR, electrochemical and cyclodextrin-inclusion studies of triazolopyridyl pyridyl ketones and dipyridyl ketones derivatives

NASA Astrophysics Data System (ADS)

Olea-Azar, C.; Abarca, B.; Norambuena, E.; Opazo, L.; Jullian, C.; Valencia, S.; Ballesteros, R.; Chadlaoui, M.

2008-11-01

The electron spin resonance (ESR) spectra of free radicals obtained by electrolytic reduction of triazolopyridyl pyridyl ketones and dipyridyl ketones derivatives were measured in dimethylsulfoxide (DMSO). The hyperfine patterns indicate that the spin density delocalization is dependent of the rings presented in the molecule. The electrochemistry of these compounds was characterized using cyclic voltammetry, in DMSO as solvent. When one carbonyl is present in the molecule one step in the reduction mechanism was observed while two carbonyl are present two steps were detected. The first wave was assigned to the generation of the correspondent free radical species, and the second wave was assigned to the dianion derivatives. The phase-solubility measurements indicated an interaction between molecules selected and cyclodextrins in water. These inclusion complexes are 1:1 with βCD, and HP-βCD. The values of Ks showed a different kind of complexes depending on which rings are included. AM1 and DFT calculations were performed to obtain the optimized geometries, theoretical hyperfine constants, and spin distributions, respectively. The theoretical results are in complete agreement with the experimental ones.

Ground motion in the presence of complex Topography II: Earthquake sources and 3D simulations

USGS Publications Warehouse

Hartzell, Stephen; Ramirez-Guzman, Leonardo; Meremonte, Mark; Leeds, Alena L.

2017-01-01

Eight seismic stations were placed in a linear array with a topographic relief of 222 m over Mission Peak in the east San Francisco Bay region for a period of one year to study topographic effects. Seventy‐two well‐recorded local earthquakes are used to calculate spectral amplitude ratios relative to a reference site. A well‐defined fundamental resonance peak is observed with individual station amplitudes following the theoretically predicted progression of larger amplitudes in the upslope direction. Favored directions of vibration are also seen that are related to the trapping of shear waves within the primary ridge dimensions. Spectral peaks above the fundamental one are also related to topographic effects but follow a more complex pattern. Theoretical predictions using a 3D velocity model and accurate topography reproduce many of the general frequency and time‐domain features of the data. Shifts in spectral frequencies and amplitude differences, however, are related to deficiencies of the model and point out the importance of contributing factors, including the shear‐wave velocity under the topographic feature, near‐surface velocity gradients, and source parameters.

Novel Fourier-domain constraint for fast phase retrieval in coherent diffraction imaging.

PubMed

Latychevskaia, Tatiana; Longchamp, Jean-Nicolas; Fink, Hans-Werner

2011-09-26

Coherent diffraction imaging (CDI) for visualizing objects at atomic resolution has been realized as a promising tool for imaging single molecules. Drawbacks of CDI are associated with the difficulty of the numerical phase retrieval from experimental diffraction patterns; a fact which stimulated search for better numerical methods and alternative experimental techniques. Common phase retrieval methods are based on iterative procedures which propagate the complex-valued wave between object and detector plane. Constraints in both, the object and the detector plane are applied. While the constraint in the detector plane employed in most phase retrieval methods requires the amplitude of the complex wave to be equal to the squared root of the measured intensity, we propose a novel Fourier-domain constraint, based on an analogy to holography. Our method allows achieving a low-resolution reconstruction already in the first step followed by a high-resolution reconstruction after further steps. In comparison to conventional schemes this Fourier-domain constraint results in a fast and reliable convergence of the iterative reconstruction process. © 2011 Optical Society of America

Mesoscale wake clouds in Skylab pictures.

NASA Technical Reports Server (NTRS)

Fujita, T. T.; Tecson, J. J.

1974-01-01

The recognition of cloud patterns formed in the wake of orographic obstacles was investigated using pictures from Skylab, for the purpose of estimating atmospheric motions. The existence of ship-wake-type wave clouds in contrast to vortex sheets were revealed during examination of the pictures, and an attempt was made to characterize the pattern of waves as well as the transition between waves and vortices. Examples of mesoscale cloud patterns which were analyzed photogrammetrically and meteorologically are presented.

Determinants of the spatiotemporal dynamics of the 2009 H1N1 pandemic in Europe: implications for real-time modelling.

PubMed

Merler, Stefano; Ajelli, Marco; Pugliese, Andrea; Ferguson, Neil M

2011-09-01

Influenza pandemics in the last century were characterized by successive waves and differences in impact and timing between different regions, for reasons not clearly understood. The 2009 H1N1 pandemic showed rapid global spread, but with substantial heterogeneity in timing within each hemisphere. Even within Europe substantial variation was observed, with the UK being unique in experiencing a major first wave of transmission in early summer and all other countries having a single major epidemic in the autumn/winter, with a West to East pattern of spread. Here we show that a microsimulation model, parameterised using data about H1N1pdm collected by the beginning of June 2009, explains the occurrence of two waves in UK and a single wave in the rest of Europe as a consequence of timing of H1N1pdm spread, fluxes of travels from US and Mexico, and timing of school vacations. The model provides a description of pandemic spread through Europe, depending on intra-European mobility patterns and socio-demographic structure of the European populations, which is in broad agreement with observed timing of the pandemic in different countries. Attack rates are predicted to depend on the socio-demographic structure, with age dependent attack rates broadly agreeing with available serological data. Results suggest that the observed heterogeneity can be partly explained by the between country differences in Europe: marked differences in school calendars, mobility patterns and sociodemographic structures. Moreover, higher susceptibility of children to infection played a key role in determining the epidemiology of the 2009 pandemic. Our work shows that it would have been possible to obtain a broad-brush prediction of timing of the European pandemic well before the autumn of 2009, much more difficult to achieve with simpler models or pre-pandemic parameterisation. This supports the use of models accounting for the structure of complex modern societies for giving insight to policy makers.

On the propagation and multiple reflections of a blast wave travelling through a dusty gas in a closed box

NASA Astrophysics Data System (ADS)

Lappa, Marcello; Drikakis, Dimitris; Kokkinakis, Ioannis

2017-03-01

This paper concerns the propagation of shock waves in an enclosure filled with dusty gas. The main motivation for this problem is to probe the effect on such dynamics of solid particles dispersed in the fluid medium. This subject, which has attracted so much attention over recent years given its important implications in the study of the structural stability of systems exposed to high-energy internal detonations, is approached here in the framework of a hybrid numerical two-way coupled Eulerian-Lagrangian methodology. In particular, insights are sought by considering a relatively simple archetypal setting corresponding to a shock wave originating from a small spherical region initialized on the basis of available analytic solutions. The response of the system is explored numerically with respect to several parameters, including the blast intensity (via the related value of the initial shock Mach number), the solid mass fraction (mass load), and the particle size (Stokes number). Results are presented in terms of pressure-load diagrams. Beyond practical applications, it is shown that a kaleidoscope of fascinating patterns is produced by the "triadic" relationships among multiple shock reflection events and particle-fluid and particle-wall interaction dynamics. These would be of great interest to researchers and scientists interested in fundamental problems relating to the general theory of pattern formation in complex nonlinear multiphase systems.

Weakly and strongly coupled Belousov-Zhabotinsky patterns.

PubMed

Weiss, Stephan; Deegan, Robert D

2017-02-01

We investigate experimentally and numerically the synchronization of two-dimensional spiral wave patterns in the Belousov-Zhabotinsky reaction due to point-to-point coupling of two separate domains. Different synchronization modalities appear depending on the coupling strength and the initial patterns in each domain. The behavior as a function of the coupling strength falls into two qualitatively different regimes. The weakly coupled regime is characterized by inter-domain interactions that distorted but do not break wave fronts. Under weak coupling, spiral cores are pushed around by wave fronts in the other domain, resulting in an effective interaction between cores in opposite domains. In the case where each domain initially contains a single spiral, the cores form a bound pair and orbit each other at quantized distances. When the starting patterns consist of multiple randomly positioned spiral cores, the number of cores decreases with time until all that remains are a few cores that are synchronized with a partner in the other domain. The strongly coupled regime is characterized by interdomain interactions that break wave fronts. As a result, the wave patterns in both domains become identical.

Weakly and strongly coupled Belousov-Zhabotinsky patterns

NASA Astrophysics Data System (ADS)

Weiss, Stephan; Deegan, Robert D.

2017-02-01

We investigate experimentally and numerically the synchronization of two-dimensional spiral wave patterns in the Belousov-Zhabotinsky reaction due to point-to-point coupling of two separate domains. Different synchronization modalities appear depending on the coupling strength and the initial patterns in each domain. The behavior as a function of the coupling strength falls into two qualitatively different regimes. The weakly coupled regime is characterized by inter-domain interactions that distorted but do not break wave fronts. Under weak coupling, spiral cores are pushed around by wave fronts in the other domain, resulting in an effective interaction between cores in opposite domains. In the case where each domain initially contains a single spiral, the cores form a bound pair and orbit each other at quantized distances. When the starting patterns consist of multiple randomly positioned spiral cores, the number of cores decreases with time until all that remains are a few cores that are synchronized with a partner in the other domain. The strongly coupled regime is characterized by interdomain interactions that break wave fronts. As a result, the wave patterns in both domains become identical.

A Fresh Look at Longitudinal Standing Waves on a Spring

NASA Astrophysics Data System (ADS)

Rutherford, Casey

2013-01-01

Transverse standing waves produced on a string, as shown in Fig. 1, are a common demonstration of standing wave patterns that have nodes at both ends. Longitudinal standing waves can be produced on a helical spring that is mounted vertically and attached to a speaker, as shown in Fig. 2, and used to produce both node-node (NN) and node-antinode (NA) standing waves. The resonant frequencies of the two standing wave patterns are related with theory that is accessible to students in algebra-based introductory physics courses, and actual measurements show good agreement with theoretical predictions.

The life-cycle of Riemann-Silberstein electromagnetic vortices

NASA Astrophysics Data System (ADS)

Nye, J. F.

2017-11-01

To study the singularities of a monochromatic electromagnetic wave field in free space, it is desirable to use a quantity that combines both the electric field E and the magnetic field B in equal measure. The Riemann-Silberstein (R-S) field is a way of doing this. It is based on the real physical E and B and one constructs from them the complex vector field {F}={E}+{{i}} {B}. Then, one constructs {F}\\cdot {F} and studies the optical vortices of this R-S complex scalar field. Unlike the better-known and much studied optical vortices of a monochromatic complex scalar field, which are stationary, these vortices are normally in continual motion; they oscillate at the optical frequency. We study their life cycle in the simplest model that is sufficiently generic, namely, fields generated by the interference of four randomly chosen plane elliptically polarised waves. The topological events in the life cycle do not repeat on a 3D space lattice in a stationary laboratory frame. In space-time, however, the R-S vortices are invariant under any Lorentz transformation, and because of this and the inherent time repetition there is a particular moving frame in space-time, reached by a Lorentz transformation, where there exists a repeating pattern of events in space. Its 4D unit cell constitutes, in effect, a description of the whole infinite pattern. Just because they are in constant motion, it is not surprising that the R-S vortex lines in the model make reconnections and appear as rings that either shrink to nothing or appear from nothing. However, these processes occur in groups of four, reflecting the fact that the unit cell is face-centred. What distinguishes the R-S field from the other complex scalar fields containing vortices is the existence of this face-centred repeating cell.

Coherence of river and ocean conditions along the US West Coast during storms

USGS Publications Warehouse

Kniskern, T.A.; Warrick, J.A.; Farnsworth, K.L.; Wheatcroft, R.A.; Goni, M.A.

2011-01-01

The majority of water and sediment discharge from the small, mountainous watersheds of the US West Coast occurs during and immediately following winter storms. The physical conditions (waves, currents, and winds) within and acting upon the proximal coastal ocean during these winter storms strongly influence dispersal patterns. We examined this river-ocean temporal coherence for four coastal river-shelf systems of the US West Coast (Umpqua, Eel, Salinas, and Santa Clara) to evaluate whether specific ocean conditions occur during floods that may influence coastal dispersal of sediment. Eleven years of corresponding river discharge, wind, and wave data were obtained for each river-shelf system from USGS and NOAA historical records, and each record was evaluated for seasonal and event-based patterns. Because near-bed shear stresses due to waves influence sediment resuspension and transport, we used spectral wave data to compute and evaluate wave-generated bottom-orbital velocities. The highest values of wave energy and discharge for all four systems were consistently observed between October 15 and March 15, and there were strong latitudinal patterns observed in these data with lower discharge and wave energies in the southernmost systems. During floods we observed patterns of river-ocean coherence that differed from the overall seasonal patterns. For example, downwelling winds generally prevailed during floods in the northern two systems (Umpqua and Eel), whereas winds in the southern systems (Salinas and Santa Clara) were generally downwelling before peak discharge and upwelling after peak discharge. Winds not associated with floods were generally upwelling on all four river-shelf systems. Although there are seasonal variations in river-ocean coherence, waves generally led floods in the three northern systems, while they lagged floods in the Santa Clara. Combined, these observations suggest that there are consistent river-ocean coherence patterns along the US West Coast during winter storms and that these patterns vary substantially with latitude. These results should assist with future evaluations of flood plume formation and sediment fate along this coast. ?? 2011 Elsevier Ltd.

Light-driven dynamic Archimedes spirals and periodic oscillatory patterns of topological solitons in anisotropic soft matter

DOE PAGES

Martinez, Angel; Smalyukh, Ivan I.

2015-02-12

Oscillatory and excitable systems very commonly exhibit formation of dynamic non-equilibrium patterns. For example, rotating spiral patterns are observed in biological, chemical, and physical systems ranging from organization of slime mold cells to Belousov-Zhabotinsky reactions, and to crystal growth from nuclei with screw dislocations. Here we describe spontaneous formation of spiral waves and a large variety of other dynamic patterns in anisotropic soft matter driven by low-intensity light. The unstructured ambient or microscope light illumination of thin liquid crystal films in contact with a self-assembled azobenzene monolayer causes spontaneous formation, rich spatial organization, and dynamics of twisted domains and topologicalmore » solitons accompanied by the dynamic patterning of azobenzene group orientations within the monolayer. Linearly polarized incident light interacts with the twisted liquid crystalline domains, mimicking their dynamics and yielding patterns in the polarization state of transmitted light, which can be transformed to similar dynamic patterns in its intensity and interference color. This shows that the delicate light-soft-matter interaction can yield complex self-patterning of both. Finally, we uncover underpinning physical mechanisms and discuss potential uses.« less

Rapid detection of malignant bio-species using digital holographic pattern recognition and nano-photonics

NASA Astrophysics Data System (ADS)

Sarkisov, Sergey S.; Kukhtareva, Tatiana; Kukhtarev, Nickolai V.; Curley, Michael J.; Edwards, Vernessa; Creer, Marylyn

2013-03-01

There is a great need for rapid detection of bio-hazardous species particularly in applications to food safety and biodefense. It has been recently demonstrated that the colonies of various bio-species could be rapidly detected using culture-specific and reproducible patterns generated by scattered non-coherent light. However, the method heavily relies on a digital pattern recognition algorithm, which is rather complex, requires substantial computational power and is prone to ambiguities due to shift, scale, or orientation mismatch between the analyzed pattern and the reference from the library. The improvement could be made, if, in addition to the intensity of the scattered optical wave, its phase would be also simultaneously recorded and used for the digital holographic pattern recognition. In this feasibility study the research team recorded digital Gabor-type (in-line) holograms of colonies of micro-organisms, such as Salmonella with a laser diode as a low-coherence light source and a lensless high-resolution (2.0x2.0 micron pixel pitch) digital image sensor. The colonies were grown in conventional Petri dishes using standard methods. The digitally recorded holograms were used for computational reconstruction of the amplitude and phase information of the optical wave diffracted on the colonies. Besides, the pattern recognition of the colony fragments using the cross-correlation between the digital hologram was also implemented. The colonies of mold fungi Altenaria sp, Rhizophus, sp, and Aspergillus sp have been also generating nano-colloidal silver during their growth in specially prepared matrices. The silver-specific plasmonic optical extinction peak at 410-nm was also used for rapid detection and growth monitoring of the fungi colonies.

A conformational change within the WAVE2 complex regulates its degradation following cellular activation

PubMed Central

Joseph, Noah; Biber, Guy; Fried, Sophia; Reicher, Barak; Levy, Omer; Sabag, Batel; Noy, Elad; Barda-Saad, Mira

2017-01-01

WASp family Verprolin-homologous protein-2 (WAVE2), a member of the Wiskott-Aldrich syndrome protein (WASp) family of actin nucleation promoting factors, is a central regulator of actin cytoskeleton polymerization and dynamics. Multiple signaling pathways operate via WAVE2 to promote the actin-nucleating activity of the actin-related protein 2/3 (Arp2/3) complex. WAVE2 exists as a part of a pentameric protein complex known as the WAVE regulatory complex (WRC), which is unstable in the absence of its individual proteins. While the involvement of WAVE2 in actin polymerization has been well documented, its negative regulation mechanism is poorly characterized to date. Here, we demonstrate that WAVE2 undergoes ubiquitylation in a T-cell activation dependent manner, followed by proteasomal degradation. The WAVE2 ubiquitylation site was mapped to lysine 45, located at the N-terminus where WAVE2 binds to the WRC. Using Förster resonance energy transfer (FRET), we reveal that the autoinhibitory conformation of the WRC maintains the stability of WAVE2 in resting cells; the release of autoinhibition following T-cell activation facilitates the exposure of WAVE2 to ubiquitylation, leading to its degradation. The dynamic conformational structures of WAVE2 during cellular activation dictate its degradation. PMID:28332566

A conformational change within the WAVE2 complex regulates its degradation following cellular activation.

PubMed

Joseph, Noah; Biber, Guy; Fried, Sophia; Reicher, Barak; Levy, Omer; Sabag, Batel; Noy, Elad; Barda-Saad, Mira

2017-03-23

WASp family Verprolin-homologous protein-2 (WAVE2), a member of the Wiskott-Aldrich syndrome protein (WASp) family of actin nucleation promoting factors, is a central regulator of actin cytoskeleton polymerization and dynamics. Multiple signaling pathways operate via WAVE2 to promote the actin-nucleating activity of the actin-related protein 2/3 (Arp2/3) complex. WAVE2 exists as a part of a pentameric protein complex known as the WAVE regulatory complex (WRC), which is unstable in the absence of its individual proteins. While the involvement of WAVE2 in actin polymerization has been well documented, its negative regulation mechanism is poorly characterized to date. Here, we demonstrate that WAVE2 undergoes ubiquitylation in a T-cell activation dependent manner, followed by proteasomal degradation. The WAVE2 ubiquitylation site was mapped to lysine 45, located at the N-terminus where WAVE2 binds to the WRC. Using Förster resonance energy transfer (FRET), we reveal that the autoinhibitory conformation of the WRC maintains the stability of WAVE2 in resting cells; the release of autoinhibition following T-cell activation facilitates the exposure of WAVE2 to ubiquitylation, leading to its degradation. The dynamic conformational structures of WAVE2 during cellular activation dictate its degradation.

Spike-like solitary waves in incompressible boundary layers driven by a travelling wave.

PubMed

Feng, Peihua; Zhang, Jiazhong; Wang, Wei

2016-06-01

Nonlinear waves produced in an incompressible boundary layer driven by a travelling wave are investigated, with damping considered as well. As one of the typical nonlinear waves, the spike-like wave is governed by the driven-damped Benjamin-Ono equation. The wave field enters a completely irregular state beyond a critical time, increasing the amplitude of the driving wave continuously. On the other hand, the number of spikes of solitary waves increases through multiplication of the wave pattern. The wave energy grows in a sequence of sharp steps, and hysteresis loops are found in the system. The wave energy jumps to different levels with multiplication of the wave, which is described by winding number bifurcation of phase trajectories. Also, the phenomenon of multiplication and hysteresis steps is found when varying the speed of driving wave as well. Moreover, the nature of the change of wave pattern and its energy is the stability loss of the wave caused by saddle-node bifurcation.

Comparison of in-situ and optical current-meter estimates of rip-current circulation

NASA Astrophysics Data System (ADS)

Moulton, M.; Chickadel, C. C.; Elgar, S.; Raubenheimer, B.

2016-12-01

Rip currents are fast, narrow, seaward flows that transport material from the shoreline to the shelf. Spatially and temporally complex rip current circulation patterns are difficult to resolve with in-situ instrument arrays. Here, high spatial-resolution estimates of rip current circulation from remotely sensed optical images of the sea surface are compared with in-situ estimates of currents in and near channels ( 1- to 2-m deep and 30-m wide) dredged across the surf zone. Alongshore flows are estimated using the optical current-meter method, and cross-shore flows are derived with the assumption of continuity. The observations span a range of wave conditions, tidal elevations, and flow patterns, including meandering alongshore currents near and in the channel, and 0.5 m/s alongshore flows converging at a 0.8 m/s rip jet in the channel. In addition, the remotely sensed velocities are used to investigate features of the spatially complex flow patterns not resolved by the spatially sparse in-situ sensors, including the spatial extent of feeder current zones and the width, alongshore position, and cross-shore extent of rip current jets. Funded by ASD(R&E) and NSF.

Multivariate statistical data analysis methods for detecting baroclinic wave interactions in the thermally driven rotating annulus

NASA Astrophysics Data System (ADS)

von Larcher, Thomas; Harlander, Uwe; Alexandrov, Kiril; Wang, Yongtai

2010-05-01

Experiments on baroclinic wave instabilities in a rotating cylindrical gap have been long performed, e.g., to unhide regular waves of different zonal wave number, to better understand the transition to the quasi-chaotic regime, and to reveal the underlying dynamical processes of complex wave flows. We present the application of appropriate multivariate data analysis methods on time series data sets acquired by the use of non-intrusive measurement techniques of a quite different nature. While the high accurate Laser-Doppler-Velocimetry (LDV ) is used for measurements of the radial velocity component at equidistant azimuthal positions, a high sensitive thermographic camera measures the surface temperature field. The measurements are performed at particular parameter points, where our former studies show that kinds of complex wave patterns occur [1, 2]. Obviously, the temperature data set has much more information content as the velocity data set due to the particular measurement techniques. Both sets of time series data are analyzed by using multivariate statistical techniques. While the LDV data sets are studied by applying the Multi-Channel Singular Spectrum Analysis (M - SSA), the temperature data sets are analyzed by applying the Empirical Orthogonal Functions (EOF ). Our goal is (a) to verify the results yielded with the analysis of the velocity data and (b) to compare the data analysis methods. Therefor, the temperature data are processed in a way to become comparable to the LDV data, i.e. reducing the size of the data set in such a manner that the temperature measurements would imaginary be performed at equidistant azimuthal positions only. This approach initially results in a great loss of information. But applying the M - SSA to the reduced temperature data sets enable us to compare the methods. [1] Th. von Larcher and C. Egbers, Experiments on transitions of baroclinic waves in a differentially heated rotating annulus, Nonlinear Processes in Geophysics, 2005, 12, 1033-1041, NPG Print: ISSN 1023-5809, NPG Online: ISSN 1607-7946 [2] U. Harlander, Th. von Larcher, Y. Wang and C. Egbers, PIV- and LDV-measurements of baroclinic wave interactions in a thermally driven rotating annulus, Experiments in Fluids, 2009, DOI: 10.1007/s00348-009-0792-5

Pattern dependence in high-speed Q-modulated distributed feedback laser.

PubMed

Zhu, Hongli; Xia, Yimin; He, Jian-Jun

2015-05-04

We investigate the pattern dependence in high speed Q-modulated distributed feedback laser based on its complete physical structure and material properties. The structure parameters of the gain section as well as the modulation and phase sections are all taken into account in the simulations based on an integrated traveling wave model. Using this model, we show that an example Q-modulated DFB laser can achieve an extinction ratio of 6.8dB with a jitter of 4.7ps and a peak intensity fluctuation of less than 15% for 40Gbps RZ modulation signal. The simulation method is proved very useful for the complex laser structure design and high speed performance optimization, as well as for providing physical insight of the operation mechanism.

Characteristics of the Japanese sea cucumber Apostichopus japonicus's population in the Sea of Japan (Kievka Bay)

NASA Astrophysics Data System (ADS)

Gavrilova, G. S.; Sukhin, I. Yu.

2011-06-01

In Kievka Bay of the Sea of Japan, the population of the Japanese sea cucumber Apostichopus japonicus inhabits the areas of coarse sediments and complex bottom topography. These distributional patterns are closely related to the species' ecology, i.e., to the demand for protection against the wave turbulence. The aggregationing coverage of the sea cucumber population is about 80 hectares, where ˜200 thousand animals were accounted for in the last years. The aggregation's area varies during the year, which is closely related to the species' biological peculiarities, such as their behavioral patterns and the redistribution of their food resources. A significant increase of the juvenile population occurred after the farm-reared sea cucumber spat were released in 2003.

Air pressure waves from Mount St. Helens eruptions

NASA Astrophysics Data System (ADS)

Reed, Jack W.

1987-10-01

Infrasonic recordings of the pressure wave from the Mount St. Helens (MSH) eruption on May 18, 1980, together with the weather station barograph records were used to estimate an equivalent explosion airblast yield for this eruption. Pressure wave amplitudes versus distance patterns were found to be comparable with patterns found for a small-scale nuclear explosion, the Krakatoa eruption, and the Tunguska comet impact, indicating that the MSH wave came from an explosion equivalent of about 5 megatons of TNT. The peculiar audibility pattern reported, with the blast being heard only at ranges beyond about 100 km, is explained by consideration of finite-amplitude shock propagation developments.

Quantitative locomotion study of freely swimming micro-organisms using laser diffraction.

PubMed

Magnes, Jenny; Susman, Kathleen; Eells, Rebecca

2012-10-25

Soil and aquatic microscopic organisms live and behave in a complex three-dimensional environment. Most studies of microscopic organism behavior, in contrast, have been conducted using microscope-based approaches, which limit the movement and behavior to a narrow, nearly two-dimensional focal field.(1) We present a novel analytical approach that provides real-time analysis of freely swimming C. elegans in a cuvette without dependence on microscope-based equipment. This approach consists of tracking the temporal periodicity of diffraction patterns generated by directing laser light through the cuvette. We measure oscillation frequencies for freely swimming nematodes. Analysis of the far-field diffraction patterns reveals clues about the waveforms of the nematodes. Diffraction is the process of light bending around an object. In this case light is diffracted by the organisms. The light waves interfere and can form a diffraction pattern. A far-field, or Fraunhofer, diffraction pattern is formed if the screen-to-object distance is much larger than the diffracting object. In this case, the diffraction pattern can be calculated (modeled) using a Fourier transform.(2) C. elegans are free-living soil-dwelling nematodes that navigate in three dimensions. They move both on a solid matrix like soil or agar in a sinusoidal locomotory pattern called crawling and in liquid in a different pattern called swimming.(3) The roles played by sensory information provided by mechanosensory, chemosensory, and thermosensory cells that govern plastic changes in locomotory patterns and switches in patterns are only beginning to be elucidated.(4) We describe an optical approach to measuring nematode locomotion in three dimensions that does not require a microscope and will enable us to begin to explore the complexities of nematode locomotion under different conditions.

Ultrasound Technologies for the Spatial Patterning of Cells and Extracellular Matrix Proteins and the Vascularization of Engineered Tissue

NASA Astrophysics Data System (ADS)

Garvin, Kelley A.

Technological advancements in the field of tissue engineering could save the lives of thousands of organ transplant patients who die each year while waiting for donor organs. Currently, two of the primary challenges preventing tissue engineers from developing functional replacement tissues and organs are the need to recreate complex cell and extracellular microenvironments and to vascularize the tissue to maintain cell viability and function. Ultrasound is a form of mechanical energy that can noninvasively and nondestructively interact with tissues at the cell and protein level. In this thesis, novel ultrasound-based technologies were developed for the spatial patterning of cells and extracellular matrix proteins and the vascularization of three-dimensional engineered tissue constructs. Acoustic radiation forces associated with ultrasound standing wave fields were utilized to noninvasively control the spatial organization of cells and cell-bound extracellular matrix proteins within collagen-based engineered tissue. Additionally, ultrasound induced thermal mechanisms were exploited to site-specifically pattern various extracellular matrix collagen microstructures within a single engineered tissue construct. Finally, ultrasound standing wave field technology was used to promote the rapid and extensive vascularization of three-dimensional tissue constructs. As such, the ultrasound technologies developed in these studies have the potential to provide the field of tissue engineering with novel strategies to spatially pattern cells and extracellular matrix components and to vascularize engineered tissue, and thus, could advance the fabrication of functional replacement tissues and organs in the field of tissue engineering.

Reduction and coding of synthetic aperture radar data with Fourier transforms

NASA Technical Reports Server (NTRS)

Tilley, David G.

1995-01-01

Recently, aboard the Space Radar Laboratory (SRL), the two roles of Fourier Transforms for ocean image synthesis and surface wave analysis have been implemented with a dedicated radar processor to significantly reduce Synthetic Aperture Radar (SAR) ocean data before transmission to the ground. The object was to archive the SAR image spectrum, rather than the SAR image itself, to reduce data volume and capture the essential descriptors of the surface wave field. SAR signal data are usually sampled and coded in the time domain for transmission to the ground where Fourier Transforms are applied both to individual radar pulses and to long sequences of radar pulses to form two-dimensional images. High resolution images of the ocean often contain no striking features and subtle image modulations by wind generated surface waves are only apparent when large ocean regions are studied, with Fourier transforms, to reveal periodic patterns created by wind stress over the surface wave field. Major ocean currents and atmospheric instability in coastal environments are apparent as large scale modulations of SAR imagery. This paper explores the possibility of computing complex Fourier spectrum codes representing SAR images, transmitting the coded spectra to Earth for data archives and creating scenes of surface wave signatures and air-sea interactions via inverse Fourier transformations with ground station processors.

Compression and reflection of visually evoked cortical waves

PubMed Central

Xu, Weifeng; Huang, Xiaoying; Takagaki, Kentaroh; Wu, Jian-young

2007-01-01

Summary Neuronal interactions between primary and secondary visual cortical areas are important for visual processing, but the spatiotemporal patterns of the interaction are not well understood. We used voltage-sensitive dye imaging to visualize neuronal activity in rat visual cortex and found novel visually evoked waves propagating from V1 to other visual areas. A primary wave originated in the monocular area of V1 and was “compressed” when propagating to V2. A reflected wave initiated after compression and propagated backward into V1. The compression occurred at the V1/V2 border, and local GABAA inhibition is important for the compression. The compression/reflection pattern provides a two-phase modulation: V1 is first depolarized by the primary wave and then V1 and V2 are simultaneously depolarized by the reflected and primary waves, respectively. The compression/reflection pattern only occurred for evoked but not for spontaneous waves, suggesting that it is organized by an internal mechanism associated with visual processing. PMID:17610821

Circumferential and functional re-entry of in vivo slow-wave activity in the porcine small intestine.

PubMed

Angeli, T R; O'Grady, G; Du, P; Paskaranandavadivel, N; Pullan, A J; Bissett, I P; Cheng, L K

2013-05-01

Slow-waves modulate the pattern of small intestine contractions. However, the large-scale spatial organization of intestinal slow-wave pacesetting remains uncertain because most previous studies have had limited resolution. This study applied high-resolution (HR) mapping to evaluate intestinal pacesetting mechanisms and propagation patterns in vivo. HR serosal mapping was performed in anesthetized pigs using flexible arrays (256 electrodes; 32 × 8; 4 mm spacing), applied along the jejunum. Slow-wave propagation patterns, frequencies, and velocities were calculated. Slow-wave initiation sources were identified and analyzed by animation and isochronal activation mapping. Analysis comprised 32 recordings from nine pigs (mean duration 5.1 ± 3.9 min). Slow-wave propagation was analyzed, and a total of 26 sources of slow-wave initiation were observed and classified as focal pacemakers (31%), sites of functional re-entry (23%) and circumferential re-entry (35%), or indeterminate sources (11%). The mean frequencies of circumferential and functional re-entry were similar (17.0 ± 0.3 vs 17.2 ± 0.4 cycle min(-1) ; P = 0.5), and greater than that of focal pacemakers (12.7 ± 0.8 cycle min(-1) ; P < 0.001). Velocity was anisotropic (12.9 ± 0.7 mm s(-1) circumferential vs 9.0 ± 0.7 mm s(-1) longitudinal; P < 0.05), contributing to the onset and maintenance of re-entry. This study has shown multiple patterns of slow-wave initiation in the jejunum of anesthetized pigs. These results constitute the first description and analysis of circumferential re-entry in the gastrointestinal tract and functional re-entry in the in vivo small intestine. Re-entry can control the direction, pattern, and frequency of slow-wave propagation, and its occurrence and functional significance merit further investigation. © 2013 Blackwell Publishing Ltd.

Tunable Nanowire Patterning Using Standing Surface Acoustic Waves

PubMed Central

Chen, Yuchao; Ding, Xiaoyun; Lin, Sz-Chin Steven; Yang, Shikuan; Huang, Po-Hsun; Nama, Nitesh; Zhao, Yanhui; Nawaz, Ahmad Ahsan; Guo, Feng; Wang, Wei; Gu, Yeyi; Mallouk, Thomas E.; Huang, Tony Jun

2014-01-01

Patterning of nanowires in a controllable, tunable manner is important for the fabrication of functional nanodevices. Here we present a simple approach for tunable nanowire patterning using standing surface acoustic waves (SSAW). This technique allows for the construction of large-scale nanowire arrays with well-controlled patterning geometry and spacing within 5 seconds. In this approach, SSAWs were generated by interdigital transducers (IDTs), which induced a periodic alternating current (AC) electric field on the piezoelectric substrate and consequently patterned metallic nanowires in suspension. The patterns could be deposited onto the substrate after the liquid evaporated. By controlling the distribution of the SSAW field, metallic nanowires were assembled into different patterns including parallel and perpendicular arrays. The spacing of the nanowire arrays could be tuned by controlling the frequency of the surface acoustic waves. Additionally, we observed 3D spark-shape nanowire patterns in the SSAW field. The SSAW-based nanowire-patterning technique presented here possesses several advantages over alternative patterning approaches, including high versatility, tunability, and efficiency, making it promising for device applications. PMID:23540330

WAVE2 forms a complex with PKA and is involved in PKA enhancement of membrane protrusions.

PubMed

Yamashita, Hiroshi; Ueda, Kazumitsu; Kioka, Noriyuki

2011-02-04

PKA contributes to many physiological processes, including glucose homeostasis and cell migration. The substrate specificity of PKA is low compared with other kinases; thus, complex formation with A-kinase-anchoring proteins is important for the localization of PKA in specific subcellular regions and the phosphorylation of specific substrates. Here, we show that PKA forms a complex with WAVE2 (Wiskott-Aldrich syndrome protein family verprolin-homologous protein 2) in MDA-MB-231 breast cancer cells and mouse brain extracts. Two separate regions of WAVE2 are involved in WAVE2-PKA complex formation. This complex localizes to the leading edge of MDA-MB-231 cells. PKA activation results in enlargement of the membrane protrusion. WAVE2 depletion impairs PKA localization at membrane protrusions and the enlargement of membrane protrusion induced by PKA activation. Together, these results suggest that WAVE2 works as an A-kinase-anchoring protein that recruits PKA at membrane protrusions and plays a role in the enlargement of membrane protrusions induced by PKA activation.

Animating streamlines with repeated asymmetric patterns for steady flow visualization

NASA Astrophysics Data System (ADS)

Yeh, Chih-Kuo; Liu, Zhanping; Lee, Tong-Yee

2012-01-01

Animation provides intuitive cueing for revealing essential spatial-temporal features of data in scientific visualization. This paper explores the design of Repeated Asymmetric Patterns (RAPs) in animating evenly-spaced color-mapped streamlines for dense accurate visualization of complex steady flows. We present a smooth cyclic variable-speed RAP animation model that performs velocity (magnitude) integral luminance transition on streamlines. This model is extended with inter-streamline synchronization in luminance varying along the tangential direction to emulate orthogonal advancing waves from a geometry-based flow representation, and then with evenly-spaced hue differing in the orthogonal direction to construct tangential flow streaks. To weave these two mutually dual sets of patterns, we propose an energy-decreasing strategy that adopts an iterative yet efficient procedure for determining the luminance phase and hue of each streamline in HSL color space. We also employ adaptive luminance interleaving in the direction perpendicular to the flow to increase the contrast between streamlines.

The effects of daily weather variables on psychosis admissions to psychiatric hospitals

NASA Astrophysics Data System (ADS)

McWilliams, Stephen; Kinsella, Anthony; O'Callaghan, Eadbhard

2013-07-01

Several studies have noted seasonal variations in admission rates of patients with psychotic illnesses. However, the changeable daily meteorological patterns within seasons have never been examined in any great depth in the context of admission rates. A handful of small studies have posed interesting questions regarding a potential link between psychiatric admission rates and meteorological variables such as environmental temperature (especially heat waves) and sunshine. In this study, we used simple non-parametric testing and more complex ARIMA and time-series regression analysis to examine whether daily meteorological patterns (wind speed and direction, barometric pressure, rainfall, sunshine, sunlight and temperature) exert an influence on admission rates for psychotic disorders across 12 regions in Ireland. Although there were some weak but interesting trends for temperature, barometric pressure and sunshine, the meteorological patterns ultimately did not exert a clinically significant influence over admissions for psychosis. Further analysis is needed.

Membrane transport of WAVE2 and lamellipodia formation require Pak1 that mediates phosphorylation and recruitment of stathmin/Op18 to Pak1-WAVE2-kinesin complex.

PubMed

Takahashi, Kazuhide; Suzuki, Katsuo

2009-05-01

Membrane transport of WAVE2 that leads to lamellipodia formation requires a small GTPase Rac1, the motor protein kinesin, and microtubules. Here we explore the possibility of whether the Rac1-dependent and kinesin-mediated WAVE2 transport along microtubules is regulated by a p21-activated kinase Pak as a downstream effector of Rac1. We find that Pak1 constitutively binds to WAVE2 and is transported with WAVE2 to the leading edge by stimulation with hepatocyte growth factor (HGF). Concomitantly, phosphorylation of tubulin-bound stathmin/Op18 at serine 25 (Ser25) and Ser38, microtubule growth, and stathmin/Op18 binding to kinesin-WAVE2 complex were induced. The HGF-induced WAVE2 transport, lamellipodia formation, stathmin/Op18 phosphorylation at Ser38 and binding to kinesin-WAVE2 complex, but not stathmin/Op18 phosphorylation at Ser25 and microtubule growth, were abrogated by Pak1 inhibitor IPA-3 and Pak1 depletion with small interfering RNA (siRNA). Moreover, stathmin/Op18 depletion with siRNA caused significant inhibition of HGF-induced WAVE2 transport and lamellipodia formation, with HGF-independent promotion of microtubule growth. Collectively, it is suggested that Pak1 plays a critical role in HGF-induced WAVE2 transport and lamellipodia formation by directing Pak1-WAVE2-kinesin complex toward the ends of growing microtubules through phosphorylation and recruitment of tubulin-bound stathmin/Op18 to the complex.

Ionospheric acoustic and gravity wave activity above low-latitude thunderstorms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lay, Erin Hoffmann

In this report, we study the correlation between thunderstorm activity and ionospheric gravity and acoustic waves in the low-latitude ionosphere. We use ionospheric total electron content (TEC) measurements from the Low Latitude Ionospheric Sensor Network (LISN) and lightning measurements from the World- Wide Lightning Location Network (WWLLN). We find that ionospheric acoustic waves show a strong diurnal pattern in summer, peaking in the pre-midnight time period. However, the peak magnitude does not correspond to thunderstorm area, and the peak time is significantly after the peak in thunderstorm activity. Wintertime acoustic wave activity has no discernable pattern in these data. Themore » coverage area of ionospheric gravity waves in the summer was found to increase with increasing thunderstorm activity. Wintertime gravity wave activity has an observable diurnal pattern unrelated to thunderstorm activity. These findings show that while thunderstorms are not the only, or dominant source of ionospheric perturbations at low-latitudes, they do have an observable effect on gravity wave activity and could be influential in acoustic wave activity.« less

Out-of-plane stretching for simultaneous generation of different morphological wrinkles on a soft matter

NASA Astrophysics Data System (ADS)

Li, Xin; Zhao, Zhi-Jun; Park, Sang-Hu

2016-07-01

This study demonstrates a simple and flexible out-of-plane induced mechanical stretching method for generating labyrinthic, waving, and straight orderly microscale directional wrinkles. Different complex wrinkling patterns were fabricated simultaneously using a UV-curable thin layer of resin NOA-68T that was coated on a soft foundation. Then an out-of-plane pre-straining deformation was applied by a specially designed punch to generate internal elastic instabilities. The surface wrinkling pattern characteristics (shapes and size) changed according to the amount of punch stroke (pre-strain) and the cross-sectional shape of the punch. This study confirms the usefulness of this method for controlling and generating local wrinkling patterns for diverse applications. As an example, the contact angles of a water droplet on a local area of the same pattern were measured to identify the change in wettability with respect to different wrinkling shapes. This method can be utilized in topographical tunable wrinkle fabrication for local surface modification.

Pattern formation in mass conserving reaction-diffusion systems

NASA Astrophysics Data System (ADS)

Brauns, Fridtjof; Halatek, Jacob; Frey, Erwin

We present a rigorous theoretical framework able to generalize and unify pattern formation for quantitative mass conserving reaction-diffusion models. Mass redistribution controls chemical equilibria locally. Separation of diffusive mass redistribution on the level of conserved species provides a general mathematical procedure to decompose complex reaction-diffusion systems into effectively independent functional units, and to reveal the general underlying bifurcation scenarios. We apply this framework to Min protein pattern formation and identify the mechanistic roles of both involved protein species. MinD generates polarity through phase separation, whereas MinE takes the role of a control variable regulating the existence of MinD phases. Hence, polarization and not oscillations is the generic core dynamics of Min proteins in vivo. This establishes an intrinsic mechanistic link between the Min system and a broad class of intracellular pattern forming systems based on bistability and phase separation (wave-pinning). Oscillations are facilitated by MinE redistribution and can be understood mechanistically as relaxation oscillations of the polarization direction.

Reflected GPS Power for the Detection of Surface Roughness Patterns in Coastal Water

NASA Technical Reports Server (NTRS)

Oertel, George, F.; Allen, Thomas R.

2000-01-01

Coastal bays formed by the barrier islands of Delaware, Maryland and Virginia are parts of a coastal region known as a "Coastal Compartment". The coastal compartment between the Chesapeake and Delaware Bays is actually the mosaic of landscapes on the headland of the interfluve that separates these large drainage basins. The coastal compartments form a variety of different-shaped waterways landward of the coastline. Shape differences along the boundaries produce differences in exposure to wind and waves. Different shoreface topographies seaward of the coastline also influence surface roughness by changing wave-refraction patterns. Surface-water roughness (caused by waves) is controlled by a number of parameters, including fetch, shielding, exposure corridors, water-mass boundary conditions, wetland vegetation and water depth in coastal bays. In the coastal ocean, surface roughness patterns are controlled by shoreface shoaling and inlet refraction patterns in the coastal ocean. Knowledge of wave phenomena in the nearshore and backbarrier areas is needed to understand how wave climate influences important ecosystems in estuaries and bays.

The polarization patterns of skylight reflected off wave water surface.

PubMed

Zhou, Guanhua; Xu, Wujian; Niu, Chunyue; Zhao, Huijie

2013-12-30

In this paper we propose a model to understand the polarization patterns of skylight when reflected off the surface of waves. The semi-empirical Rayleigh model is used to analyze the polarization of scattered skylight; the Harrison and Coombes model is used to analyze light radiance distribution; and the Cox-Munk model and Mueller matrix are used to analyze reflections from wave surface. First, we calculate the polarization patterns and intensity distribution of light reflected off wave surface. Then we investigate their relationship with incident radiation, solar zenith angle, wind speed and wind direction. Our results show that the polarization patterns of reflected skylight from waves and flat water are different, while skylight reflected on both kinds of water is generally highly polarized at the Brewster angle and the polarization direction is approximately parallel to the water's surface. The backward-reflecting Brewster zone has a relatively low reflectance and a high DOP in all observing directions. This can be used to optimally diminish the reflected skylight and avoid sunglint in ocean optics measurements.

SCAR/WAVE: A complex issue.

PubMed

Davidson, Andrew J; Insall, Robert H

2013-11-01

The SCAR/WAVE complex drives the actin polymerisation that underlies protrusion of the front of the cell and thus drives migration. However, it is not understood how the activity of SCAR/WAVE is regulated to generate the infinite range of cellular shape changes observed during cell motility. What are the relative roles of the subunits of the SCAR/WAVE complex? What signaling molecules do they interact with? And how does the complex integrate all this information in order to control the temporal and spatial polymerisation of actin during protrusion formation? Unfortunately, the interdependence of SCAR complex members has made genetic dissection hard. In our recent paper,(1) we describe stabilization of the Dictyostelium SCAR complex by a small fragment of Abi. Here we summarize the main findings and discuss how this approach can help reveal the inner workings of this impenetrable complex.

The Hem protein mediates neuronal migration by inhibiting WAVE degradation and functions opposite of Abelson tyrosine kinase

PubMed Central

Zhu, Zengrong; Bhat, Krishna Moorthi

2011-01-01

In the nervous system, neurons form in different regions, then they migrate and occupy specific positions. We have previously shown that RP2/sib, a well-studied neuronal pair in the Drosophila ventral nerve cord (VNC), has a complex migration route. Here, we show that the Hem protein, via the WAVE complex, regulates migration of GMC-1 and its progeny RP2 neuron. In Hem or WAVE mutants, RP2 neuron either abnormally migrates, crossing the midline from one hemisegment to the contralateral hemisegment, or does not migrate at al and fail to send out its axon projection. We report that Hem regulates neuronal migration through stabilizing WAVE. Since Hem and WAVE normally form a complex, our data argues that in the absence of Hem, WAVE, which is presumably no longer in a complex, becomes susceptible to degradation. We also find that Abelson Tyrosine kinase affects RP2 migration in a similar manner as Hem and WAVE, and appears to operate via WAVE. However, while Abl negatively regulates the levels of WAVE, it regulates migration via regulating the activity of WAVE. Our results also show that during the degradation of WAVE, Hem function is opposite to that of and downstream of Abl. PMID:21726548

Waves on Ice

Atmospheric Science Data Center

2013-04-16

article title:  Waves on White: Ice or Clouds?     View Larger ... like a wavy cloud pattern was actually a wavy pattern on the ice surface. One of MISR's cloud classification products, the Angular Signature ...

Rogue waves in the Davey-Stewartson I equation.

PubMed

Ohta, Yasuhiro; Yang, Jianke

2012-09-01

General rogue waves in the Davey-Stewartson-I equation are derived by the bilinear method. It is shown that the simplest (fundamental) rogue waves are line rogue waves which arise from the constant background with a line profile and then disappear into the constant background again. It is also shown that multirogue waves describe the interaction of several fundamental rogue waves. These multirogue waves also arise from the constant background and then decay back to it, but in the intermediate times, interesting curvy wave patterns appear. However, higher-order rogue waves exhibit different dynamics. Specifically, only part of the wave structure in the higher-order rogue waves rises from the constant background and then retreats back to it, and this transient wave possesses patterns such as parabolas. But the other part of the wave structure comes from the far distance as a localized lump, which decelerates to the near field and interacts with the transient rogue wave, and is then reflected back and accelerates to the large distance again.

Propagation of acoustic shock waves between parallel rigid boundaries and into shadow zones

DOE Office of Scientific and Technical Information (OSTI.GOV)

Desjouy, C., E-mail: cyril.desjouy@gmail.com; Ollivier, S.; Dragna, D.

2015-10-28

The study of acoustic shock propagation in complex environments is of great interest for urban acoustics, but also for source localization, an underlying problematic in military applications. To give a better understanding of the phenomenon taking place during the propagation of acoustic shocks, laboratory-scale experiments and numerical simulations were performed to study the propagation of weak shock waves between parallel rigid boundaries, and into shadow zones created by corners. In particular, this work focuses on the study of the local interactions taking place between incident, reflected, and diffracted waves according to the geometry in both regular or irregular – alsomore » called Von Neumann – regimes of reflection. In this latter case, an irregular reflection can lead to the formation of a Mach stem that can modify the spatial distribution of the acoustic pressure. Short duration acoustic shock waves were produced by a 20 kilovolts electric spark source and a schlieren optical method was used to visualize the incident shockfront and the reflection/diffraction patterns. Experimental results are compared to numerical simulations based on the high-order finite difference solution of the two dimensional Navier-Stokes equations.« less

Patterns of productive activity engagement as a longitudinal predictor of depressive symptoms among older adults in urban China.

PubMed

Liu, Huiying; Lou, Vivian W Q

2017-11-01

Using two waves of panel data from the China Health and Retirement Longitudinal Study, this study prospectively assessed whether four distinct patterns of productive activity engagement would predict depressive symptoms among older adults in urban China two years later. A sample of urban residents aged 60 or above at Wave 1 and who were interviewed in both waves (N = 2398) was used. Latent class analysis (LCA) was conducted to identify distinct patterns of productive activity engagement that occurred within the Wave 1 data. Next, the generalized estimating equations were used to assess whether identified patterns predicted the levels of depressive symptoms measured at Wave 2. Our use of LCA confirmed the existence of four distinct patterns of productive activity engagement among the study sample: Informal Helper/Carer, Working-Caring Engager, Civic Contributor, and Low/Spousal Carer. All of these three patterns exhibited significantly lower levels of depressive symptoms than that of Low/Spousal Carer two years later. Our use of individual-based categorization of productive engagement better captured the reality of older adults performing various productive activities than summative scales of productive activities did and, therefore, provided a more valid clarification of differential well-being outcomes among older adults.

Internal gravity-shear waves in the atmospheric boundary layer from acoustic remote sensing data

NASA Astrophysics Data System (ADS)

Lyulyukin, V. S.; Kallistratova, M. A.; Kouznetsov, R. D.; Kuznetsov, D. D.; Chunchuzov, I. P.; Chirokova, G. Yu.

2015-03-01

The year-round continuous remote sounding of the atmospheric boundary layer (ABL) by means of the Doppler acoustic radar (sodar) LATAN-3 has been performed at the Zvenigorod Scientific Station of the Obukhov Institute of Atmospheric Physics, Russian Academy of Sciences, since 2008. A visual analysis of sodar echograms for four years revealed a large number of wavelike patterns in the intensity field of a scattered sound signal. Similar patterns were occasionally identified before in sodar, radar, and lidar sounding data. These patterns in the form of quasi-periodic inclined stripes, or cat's eyes, arise under stable stratification and significant vertical wind shears and result from the loss of the dynamic stability of the flow. In the foreign literature, these patterns, which we call internal gravity-shear waves, are often associated with Kelvin-Helmholtz waves. In the present paper, sodar echograms are classified according to the presence or absence of wavelike patterns, and a statistical analysis of the frequency of their occurrence by the year and season was performed. A relationship between the occurrence of the patterns and wind shear and between the wave length and amplitude was investigated. The criteria for the identification of gravity-shear waves, meteorological conditions of their excitation, and issues related to their observations were discussed.

CDKL5 gene-related epileptic encephalopathy: electroclinical findings in the first year of life.

PubMed

Melani, Federico; Mei, Davide; Pisano, Tiziana; Savasta, Salvatore; Franzoni, Emilio; Ferrari, Anna Rita; Marini, Carla; Guerrini, Renzo

2011-04-01

Cyclin-dependent kinase-like 5 (CDKL5) gene abnormalities cause an early-onset epileptic encephalopathy. We performed video-electroencephalography (video-EEG) monitoring early in the course of CDKL5-related epileptic encephalopathy in order to examine the early electroclinical characteristics of the condition. We used video-EEG to monitor six infants (five females, one male) with CDKL5-related epileptic encephalopathy (five mutations; one deletion), at ages 45 days to 12 months and followed them up to the ages of 14 months to 5 years (mean age 23 mo). We focused our analysis on the first year of life. The results were evaluated against those of a comparison group of nine infants (aged below 1y) with epileptic encephalography who had tested negative for CDKL5 mutations and deletions. One infant exhibited normal background activity, three exhibited moderate slowing, and two exhibited a suppression burst pattern. Two participants had epileptic spasms and four had a stereotyped complex seizure pattern, which we defined as a 'prolonged' generalized tonic-clonic event consisting of a tonic-tonic/vibratory contraction, followed by a clonic phase with series of spasms, gradually translating into repetitive distal myoclonic jerks. Seizure duration ranged from 2 to 4 minutes. The EEG correlate of each clinical phase included an initial electrodecremental event (tonic vibratory phase), irregular series of sharp waves and spike slow waves (clonic phase with series of spasms), and bilateral rhythmic sharp waves (time locked with myoclonus). Infants with CDKL5-related early epileptic encephalopathy can present in the first year of life with an unusual electroclinical pattern of 'prolonged' generalized tonic-clonic seizures. © The Authors. Journal compilation © Mac Keith Press 2011.

Electrical storm in patients with brugada syndrome is associated with early repolarization.

PubMed

Kaneko, Yoshiaki; Horie, Minoru; Niwano, Shinichi; Kusano, Kengo F; Takatsuki, Seiji; Kurita, Takashi; Mitsuhashi, Takeshi; Nakajima, Tadashi; Irie, Tadanobu; Hasegawa, Kanae; Noda, Takashi; Kamakura, Shiro; Aizawa, Yoshiyasu; Yasuoka, Ryobun; Torigoe, Katsumi; Suzuki, Hiroshi; Ohe, Toru; Shimizu, Akihiko; Fukuda, Keiichi; Kurabayashi, Masahiko; Aizawa, Yoshifusa

2014-12-01

Electrical storms (ESs) in patients with Brugada syndrome (BrS) are rare though potentially lethal. We studied 22 men with BrS and ES, defined as ≥3 episodes/d of ventricular fibrillation (VF) and compared their characteristics with those of 110 age-matched, control men with BrS without ES. BrS was diagnosed by a spontaneous or drug-induced type 1 pattern on the ECG in the absence of structural heart disease. Early repolarization (ER) was diagnosed by J waves, ie, >0.1 mV notches or slurs of the terminal portion of the QRS complex. The BrS ECG pattern was provoked with pilsicainide. A spontaneous type I ECG pattern, J waves, and horizontal/descending ST elevation were found, respectively, in 77%, 36%, and 88% of patients with ES, versus 28% (P<0.0001), 9% (P=0.003), and 60% (P=0.06) of controls. The J-wave amplitude was significantly higher in patients with than without ES (P=0.03). VF occurred during undisturbed sinus rhythm in 14 of 19 patients (74%), and ES were controlled by isoproterenol administration. All patients with ES received an implantable cardioverter defibrillator and over a 6.0±5.4 years follow-up, the prognosis of patients with ES was significantly worse than that of patients without ES. Bepridil was effective in preventing VF in 6 patients. A high prevalence of ER was found in a subgroup of patients with BrS associated with ES. ES appeared to be suppressed by isoproterenol or quinidine, whereas bepridil and quinidine were effective in the long-term prevention of VF in the highest-risk patients. © 2014 American Heart Association, Inc.

Essential role for Abi1 in embryonic survival and WAVE2 complex integrity.

PubMed

Dubielecka, Patrycja M; Ladwein, Kathrin I; Xiong, Xiaoling; Migeotte, Isabelle; Chorzalska, Anna; Anderson, Kathryn V; Sawicki, Janet A; Rottner, Klemens; Stradal, Theresia E; Kotula, Leszek

2011-04-26

Abl interactor 1 (Abi1) plays a critical function in actin cytoskeleton dynamics through participation in the WAVE2 complex. To gain a better understanding of the specific role of Abi1, we generated a conditional Abi1-KO mouse model and MEFs lacking Abi1 expression. Abi1-KO cells displayed defective regulation of the actin cytoskeleton, and this dysregulation was ascribed to altered activity of the WAVE2 complex. Changes in motility of Abi1-KO cells were manifested by a decreased migration rate and distance but increased directional persistence. Although these phenotypes did not correlate with peripheral ruffling, which was unaffected, Abi1-KO cells exhibited decreased dorsal ruffling. Western blotting analysis of Abi1-KO cell lysates indicated reduced levels of the WAVE complex components WAVE1 and WAVE2, Nap1, and Sra-1/PIR121. Although relative Abi2 levels were more than doubled in Abi1-KO cells, the absolute Abi2 expression in these cells amounted only to a fifth of Abi1 levels in the control cell line. This finding suggests that the presence of Abi1 is critical for the integrity and stability of WAVE complex and that Abi2 levels are not sufficiently increased to compensate fully for the loss of Abi1 in KO cells and to restore the integrity and function of the WAVE complex. The essential function of Abi1 in WAVE complexes and their regulation might explain the observed embryonic lethality of Abi1-deficient embryos, which survived until approximately embryonic day 11.5 and displayed malformations in the developing heart and brain. Cells lacking Abi1 and the conditional Abi1-KO mouse will serve as critical models for defining Abi1 function.

Essential role for Abi1 in embryonic survival and WAVE2 complex integrity

PubMed Central

Dubielecka, Patrycja M.; Ladwein, Kathrin I.; Xiong, Xiaoling; Migeotte, Isabelle; Chorzalska, Anna; Anderson, Kathryn V.; Sawicki, Janet A.; Rottner, Klemens; Stradal, Theresia E.; Kotula, Leszek

2011-01-01

Abl interactor 1 (Abi1) plays a critical function in actin cytoskeleton dynamics through participation in the WAVE2 complex. To gain a better understanding of the specific role of Abi1, we generated a conditional Abi1-KO mouse model and MEFs lacking Abi1 expression. Abi1-KO cells displayed defective regulation of the actin cytoskeleton, and this dysregulation was ascribed to altered activity of the WAVE2 complex. Changes in motility of Abi1-KO cells were manifested by a decreased migration rate and distance but increased directional persistence. Although these phenotypes did not correlate with peripheral ruffling, which was unaffected, Abi1-KO cells exhibited decreased dorsal ruffling. Western blotting analysis of Abi1-KO cell lysates indicated reduced levels of the WAVE complex components WAVE1 and WAVE2, Nap1, and Sra-1/PIR121. Although relative Abi2 levels were more than doubled in Abi1-KO cells, the absolute Abi2 expression in these cells amounted only to a fifth of Abi1 levels in the control cell line. This finding suggests that the presence of Abi1 is critical for the integrity and stability of WAVE complex and that Abi2 levels are not sufficiently increased to compensate fully for the loss of Abi1 in KO cells and to restore the integrity and function of the WAVE complex. The essential function of Abi1 in WAVE complexes and their regulation might explain the observed embryonic lethality of Abi1-deficient embryos, which survived until approximately embryonic day 11.5 and displayed malformations in the developing heart and brain. Cells lacking Abi1 and the conditional Abi1-KO mouse will serve as critical models for defining Abi1 function. PMID:21482783

Backscatter analysis of dihedral corner reflectors using physical optics and the physical theory of diffraction

NASA Technical Reports Server (NTRS)

Griesser, Timothy; Balanis, Constantine A.

1987-01-01

The backscatter cross-sections of dihedral corner reflectors in the azimuthal plane are presently determined by both physical optics (PO) and the physical theory of diffraction (PTD), yielding results for the vertical and horizontal polarizations. In the first analysis method used, geometrical optics is used in place of PO at initial reflections in order to maintain the planar character of the reflected wave and reduce the complexity of the analysis. In the second method, PO is used at almost every reflection in order to maximize the accuracy of the PTD solution at the expense of a rapid increase in complexity. Induced surface current densities and resulting cross section patterns are illustrated for the two methods.

Antenna radiation patterns in the whistler wave regime measured in a large laboratory plasma

NASA Technical Reports Server (NTRS)

Stenzel, R. L.

1976-01-01

Antenna radiation patterns of balanced electric dipoles and shielded magnetic loop antennas are obtained by measuring the relative wave amplitude with a small receiver antenna scanned around the exciter in a large uniform collisionless magnetized laboratory plasma in the whistler wave regime. The boundary effects are assumed to be negligible even for many farfield patterns. Characteristic differences are observed between electrically short and long antennas, the former exhibiting resonance cones and the latter showing dipole-like antenna patterns along the magnetic field. Resonance cones due to small electric dipoles and magnetic loops are observed in both the near zone and the far zone. A self-focusing process is revealed which produces a pencil-shaped field-aligned radiation pattern.

Spontaneous long-range calcium waves in developing butterfly wings.

PubMed

Ohno, Yoshikazu; Otaki, Joji M

2015-03-25

Butterfly wing color patterns emerge as the result of a regular arrangement of scales produced by epithelial scale cells at the pupal stage. These color patterns and scale arrangements are coordinated throughout the wing. However, the mechanism by which the development of scale cells is controlled across the entire wing remains elusive. In the present study, we used pupal wings of the blue pansy butterfly, Junonia orithya, which has distinct eyespots, to examine the possible involvement of Ca(2+) waves in wing development. Here, we demonstrate that the developing pupal wing tissue of the blue pansy butterfly displayed spontaneous low-frequency Ca(2+) waves in vivo that propagated slowly over long distances. Some waves appeared to be released from the immediate peripheries of the prospective eyespot and discal spot, though it was often difficult to identify the specific origins of these waves. Physical damage, which is known to induce ectopic eyespots, led to the radiation of Ca(2+) waves from the immediate periphery of the damaged site. Thapsigargin, which is a specific inhibitor of Ca(2+)-ATPases in the endoplasmic reticulum, induced an acute increase in cytoplasmic Ca(2+) levels and halted the spontaneous Ca(2+) waves. Additionally, thapsigargin-treated wings showed incomplete scale development as well as other scale and color pattern abnormalities. We identified a novel form of Ca(2+) waves, spontaneous low-frequency slow waves, which travel over exceptionally long distances. Our results suggest that spontaneous Ca(2+) waves play a critical role in the coordinated development of scale arrangements and possibly in color pattern formation in butterflies.

Earth Observations taken by the Expedition 13 crew

NASA Image and Video Library

2006-05-09

ISS013-E-16599 (9 May 2006) --- Wave sets and tidal currents in the Gulf of California are featured in this image photographed by an Expedition 13 crewmember on the International Space Station. In this image, sunglint off the Gulf of California gives the water a silver-gray appearance rather than the usual azure blue color. The sunglint allows us to see several active features which would not be visible otherwise. In this view of Punta Perihuete, Mexico we can see three major features: biological or man-made oils floating on the surface; the out-going tidal current; and complex wave patterns. The oils on the surface are recognizable as light grey, curved and variable-width streamers shaped by the local winds and currents. Plankton, fish, natural oil seeps and boats dumping bilges are all potential sources for these oils.

Emergent thermodynamics in a system of macroscopic, chaotic surface waves

NASA Astrophysics Data System (ADS)

Welch, Kyle J.

The properties of conventional materials are inextricably linked with their molecular composition; to make water flow like wine would require changing its molecular identity. To circumvent this restriction, I have constructed and characterized a two-dimensional metafluid, so-called because its constitutive dynamics are derived not from atoms and molecules but from macroscopic, chaotic surface waves excited on a vertically agitated fluid. Unlike in conventional fluids, the viscosity and temperature of this metafluid are independently tunable. Despite this unconventional property, our system is surprisingly consistent with equilibrium thermodynamics, despite being constructed from macroscopic, non-equilibrium elements. As a programmable material, our metafluid represents a new platform on which to study complex phenomena such as self-assembly and pattern formation. We demonstrate one such application in our study of short-chain polymer analogs embedded in our system.

Modified plenoptic camera for phase and amplitude wavefront sensing

NASA Astrophysics Data System (ADS)

Wu, Chensheng; Davis, Christopher C.

2013-09-01

Shack-Hartmann sensors have been widely applied in wavefront sensing. However, they are limited to measuring slightly distorted wavefronts whose local tilt doesn't surpass the numerical aperture of its micro-lens array and cross talk of incident waves on the mrcro-lens array should be strictly avoided. In medium to strong turbulence cases of optic communication, where large jitter in angle of arrival and local interference caused by break-up of beam are common phenomena, Shack-Hartmann sensors no longer serve as effective tools in revealing distortions in a signal wave. Our design of a modified Plenoptic Camera shows great potential in observing and extracting useful information from severely disturbed wavefronts. Furthermore, by separating complex interference patterns into several minor interference cases, it may also be capable of telling regional phase difference of coherently illuminated objects.

Nonlinear modulation near the Lighthill instability threshold in 2+1 Whitham theory

NASA Astrophysics Data System (ADS)

Bridges, Thomas J.; Ratliff, Daniel J.

2018-04-01

The dispersionless Whitham modulation equations in 2+1 (two space dimensions and time) are reviewed and the instabilities identified. The modulation theory is then reformulated, near the Lighthill instability threshold, with a slow phase, moving frame and different scalings. The resulting nonlinear phase modulation equation near the Lighthill surfaces is a geometric form of the 2+1 two-way Boussinesq equation. This equation is universal in the same sense as Whitham theory. Moreover, it is dispersive, and it has a wide range of interesting multi-periodic, quasi-periodic and multi-pulse localized solutions. For illustration the theory is applied to a complex nonlinear 2+1 Klein-Gordon equation which has two Lighthill surfaces in the manifold of periodic travelling waves. This article is part of the theme issue `Stability of nonlinear waves and patterns and related topics'.

Complex social waves of giant honeybees provoked by a dummy wasp support the special-agent hypothesis.

PubMed

Kastberger, Gerald; Weihmann, Frank; Hoetzl, Thomas

2010-03-01

The social waves in giant honeybees termed as shimmering are more complex than mexican waves. it has been demonstrated1 that shimmering is triggered by special agents at the nest surface. in this paper, we have used a nest that originated by amalgamation of two previously separated nests and stimulated waves by a dummy wasp moved on a miniature cable car. we illustrate the plausibility of the special-agent hypothesis1 also for complex shimmering processes.

Complex social waves of giant honeybees provoked by a dummy wasp support the special-agent hypothesis

PubMed Central

Weihmann, Frank; Hoetzl, Thomas

2010-01-01

The social waves in giant honeybees termed as shimmering are more complex than mexican waves. it has been demonstrated1 that shimmering is triggered by special agents at the nest surface. in this paper, we have used a nest that originated by amalgamation of two previously separated nests and stimulated waves by a dummy wasp moved on a miniature cable car. we illustrate the plausibility of the special-agent hypothesis1 also for complex shimmering processes. PMID:20585516

Shear wave speed recovery using moving interference patterns obtained in sonoelastography experiments.

PubMed

McLaughlin, Joyce; Renzi, Daniel; Parker, Kevin; Wu, Zhe

2007-04-01

Two new experiments were created to characterize the elasticity of soft tissue using sonoelastography. In both experiments the spectral variance image displayed on a GE LOGIC 700 ultrasound machine shows a moving interference pattern that travels at a very small fraction of the shear wave speed. The goal of this paper is to devise and test algorithms to calculate the speed of the moving interference pattern using the arrival times of these same patterns. A geometric optics expansion is used to obtain Eikonal equations relating the moving interference pattern arrival times to the moving interference pattern speed and then to the shear wave speed. A cross-correlation procedure is employed to find the arrival times; and an inverse Eikonal solver called the level curve method computes the speed of the interference pattern. The algorithm is tested on data from a phantom experiment performed at the University of Rochester Center for Biomedical Ultrasound.

Gravity Wave Breaking over the Central Alps: Role of Complex Terrain.

NASA Astrophysics Data System (ADS)

Jiang, Qingfang; Doyle, James D.

2004-09-01

The characteristics of gravity waves excited by the complex terrain of the central Alps during the intensive observational period (IOP) 8 of the Mesoscale Alpine Programme (MAP) is studied through the analysis of aircraft in situ measurements, GPS dropsondes, radiosondes, airborne lidar data, and numerical simulations.Mountain wave breaking occurred over the central Alps on 21 October 1999, associated with wind shear, wind turning, and a critical level with Richardson number less than unity just above the flight level (5.7 km) of the research aircraft NCAR Electra. The Electra flew two repeated transverses across the Ötztaler Alpen, during which localized turbulence was sampled. The observed maximum vertical motion was 9 m s-1, corresponding to a turbulent kinetic energy (TKE) maximum of 10.5 m2 s-2. Spectrum analysis indicates an inertia subrange up to 5-km wavelength and multiple energy-containing spikes corresponding to a wide range of wavelengths.Manual analysis of GPS dropsonde data indicates the presence of strong flow descent and a downslope windstorm over the lee slope of the Ötztaler Alpen. Farther downstream, a transition occurs across a deep hydraulic jump associated with the ascent of isentropes and local wind reversal. During the first transverse, the turbulent region is convectively unstable as indicated by a positive sensible heat flux within the turbulent portion of the segment. The TKE derived from the flight-level data indicates multiple narrow spikes, which match the patterns shown in the diagnosed buoyancy production rate of TKE. The turbulence is nonisotropic with the major TKE contribution from the -wind component. The convectively unstable zone is advected downstream during the second transverse and the turbulence becomes much stronger and more isotropic.The downslope windstorm, flow descent, and transition to turbulence through a hydraulic jump are captured by a real-data Coupled Ocean Atmosphere Mesoscale Predition System (COAMPS) simulation. Several idealized simulations are performed motivated by the observations of multiscale waves forced by the complex terrain underneath. The simulations indicate that multiscale terrain promotes wave breaking, increases mountain drag, and enhances the downslope winds and TKE generation.

3D Deformation and Evolution of Mediterranean Basins: Insights From Crustal and Mantle Anisotropy

NASA Astrophysics Data System (ADS)

Lebedev, S.; Endrun, B.; Meier, T. M.; Adam, J.; Tirel, C.

2010-12-01

The slow convergence of Africa and Eurasia has been accompanied by spectacular tectonic activity within the Mediterranean. The evolution and retreat of multiple subduction zones has brought about pervasive deformation of continental back-arc basins. Continental deformation in the Mediterranean is at rates among the highest globally, and with diverse patterns and boundary conditions. Better understanding of this deformation promises important new insights into the dynamics of continents, and numerous competing models have been put forward. The lack of consensus to date is in large part due to the paucity of observational constraints on the deformation and flow within the deep crust and lithospheric mantle. Observations of seismic anisotropy provide constraints on deformation at depth. Array analysis of surface waves, in particular, can resolve variations in anisotropic fabric both laterally and as a function of depth. Analyses of other data types, including SKS splitting and Pn anisotropy, cross-validate and complement surface-wave constraints on anisotropy. Recent seismic-anisotropy imaging in the North Tyrrhenian and the Aegean indicates widespread diffuse deformation within the lithosphere, some of it with previously unknown patterns. Anisotropy shows the layering of finite strain in the crust and mantle. It reveals complex, depth-dependent flow patterns within the extending lithosphere and underlying asthenosphere. In the northern Aegean, fast shear-wave propagation directions within the mantle lithosphere are N-S, parallel to the direction of current extension. This indicates that the brittle upper crust, undergoing both stretching and bookshelf-like faulting on NE-SW trending faults, is underlain by a viscous mantle lithosphere that is flowing straight in the direction of the N-S extension. In the south-central Aegean, deforming weakly at present, anisotropic fabric in the lower crust trends parallel to the direction of paleo-extension in the Miocene; this fabric is a record of pervasive crustal flow that accompanied the exhumation of metamorphic core complexes at that time. In the North Tyrrhenian, extension over the last 10 m.y. has also caused exhumation of metamorphic rocks, with stretching lineations recording an E-W extension direction. Anisotropic fabric in both the lower crust and mantle lithosphere match this direction, confirming that viscous flow within both layers has accommodated the extension. Previously observed SKS-wave splitting in the northern and central Aegean shows predominantly NE-SW fast-propagation directions and is likely to indicate current and recent flow in the asthenosphere due to the rapid retreat of the Hellenic subduction zone. In the North Tyrrhenian, anisotropy also changes at the lithosphere-asthenosphere boundary. Whereas the lithosphere preserves the E-W trending fabric that is a record of recent extension, the asthenosphere shows NW-SE trending fabric that indicates asthenospheric flow parallel to the Apennines and the trench, probably related to the complex configuration of the subducting slabs beneath the Alps and the Apennines.

Textural and microstructural development of the Barro Alto Complex: implications for seismic anisotropy

NASA Astrophysics Data System (ADS)

Silveira, Camila; Lagoeiro, Leonardo; Barbosa, Paola; Cavalcante, Geane Carolina; Ferreira, Filippe; Suita, Marcos; Conte, Thailli

2017-04-01

Crustal rheology is associated with the behavior of its constituents in response to stress and strain, while the seismic anisotropy is a property that can correlate these parameters. Seismic properties are strongly related to the microstructures and crystallographic preferred orientation (CPO) of the rocks. In this work, we study CPO-derived seismic anisotropy of metamorphosed gabbro-norites from the Barro Alto (Brazil central) layered complex. The EBSD technique was employed to analyze the crystallographic orientation of the main mineral assembly, diopside and feldspar. The Barro Alto complex belongs to the Tocantins Structural Province, developed between the Amazon and São Francisco cratons, during the Neoproterozoic Brasiliano orogenic cycle. This complex was formed by a mafic-ultramafic layered intrusion mylonitized and metamorphosed under granulite facies conditions. The mylonitic foliation shows compositional segregation into felsic and mafic bands. The samples are composed of porphyroclasts of plagioclase and diopside in a fine matrix of plagioclase, clinopyroxene, orthopyroxene and, less commonly, amphibole and biotite. The plagioclase porphyroclasts exhibit undulose extinction and core-mantle structure. In fine matrix samples the poles to a(100), b(010) and c(001) are randomly distributed in both phases. However, for increasing matrix grain size plagioclase grains shows maxima of a(100) poles sub-parallel to the foliation and b(010) normal to the foliation. The low value of the J index (2.4 for plagioclase and 1.8 for diopside) indicates poorly developed fabric. Misorientation profiles showing high frequency of small angle boundaries are typical of recrystallization by subgrain rotation mechanisms. The microstructural and CPO analyses suggest deformation controlled by diffusive processes. The CPO models were compared to models described in the literature, based on the anorthite + diopside assembly, since these are the major phases, and thus control the seismic properties of the aggregate. The CPO of plagioclase can then be classified as Type P, intermediate between plastic deformation and magmatic flow. The seismic anisotropy patterns presented low value of P-wave velocity (Vp), being the fast velocity direction perpendicular to the foliation, while the S wave anisotropy is extremely low (1.1 to 3%). The mineral assembly and the deformation mechanisms played a major role in the resulting patterns of seismic propagation by reducing the anisotropic behavior of these rocks, creating patterns similar to those found in an isotropic media.

Dynamic three-dimensional phase-contrast technique in MRI: application to complex flow analysis around the artificial heart valve

NASA Astrophysics Data System (ADS)

Kim, Soo Jeong; Lee, Dong Hyuk; Song, Inchang; Kim, Nam Gook; Park, Jae-Hyeung; Kim, JongHyo; Han, Man Chung; Min, Byong Goo

1998-07-01

Phase-contrast (PC) method of magnetic resonance imaging (MRI) has bee used for quantitative measurements of flow velocity and volume flow rate. It is a noninvasive technique which provides an accurate two-dimensional velocity image. Moreover, Phase Contrast Cine magnetic resonance imaging combines the flow dependent contrast of PC-MRI with the ability of cardiac cine imaging to produce images throughout the cardiac cycle. However, the accuracy of the data acquired from the single through-plane velocity encoding can be reduced by the effect of flow direction, because in many practical cases flow directions are not uniform throughout the whole region of interest. In this study, we present dynamic three-dimensional velocity vector mapping method using PC-MRI which can visualize the complex flow pattern through 3D volume rendered images displayed dynamically. The direction of velocity mapping can be selected along any three orthogonal axes. By vector summation, the three maps can be combined to form a velocity vector map that determines the velocity regardless of the flow direction. At the same time, Cine method is used to observe the dynamic change of flow. We performed a phantom study to evaluate the accuracy of the suggested PC-MRI in continuous and pulsatile flow measurement. Pulsatile flow wave form is generated by the ventricular assistant device (VAD), HEMO-PULSA (Biomedlab, Seoul, Korea). We varied flow velocity, pulsatile flow wave form, and pulsing rate. The PC-MRI-derived velocities were compared with Doppler-derived results. The velocities of the two measurements showed a significant linear correlation. Dynamic three-dimensional velocity vector mapping was carried out for two cases. First, we applied to the flow analysis around the artificial heart valve in a flat phantom. We could observe the flow pattern around the valve through the 3-dimensional cine image. Next, it is applied to the complex flow inside the polymer sac that is used as ventricle in totally implantable artificial heart (TAH). As a result we could observe the flow pattern around the valves of the sac, though complex flow can not be detected correctly in the conventional phase contrast method. In addition, we could calculate the cardiac output from TAH sac by quantitative measurement of the volume of flow across the outlet valve.

Field patterns: A new type of wave with infinitely degenerate band structure

NASA Astrophysics Data System (ADS)

Mattei, Ornella; Milton, Graeme W.

2017-12-01

Field pattern materials (FP-materials) are space-time composites with PT-symmetry in which the one-dimensional-spatial distribution of the constituents changes in time in such a special manner to give rise to a new type of waves, which we call field pattern waves (FP-waves) (MILTON G. W. and MATTEI O., Proc. R. Soc. A, 473 (2017) 20160819; MATTEI O. and MILTON G. W., New J. Phys., 19 (2017) 093022). Specifically, due to the special periodic space-time geometry of these materials, when an instantaneous disturbance propagates through the system, the branching of the characteristic lines at the space-time interfaces between phases does not lead to a chaotic cascade of disturbances but concentrates on an orderly pattern of disturbances: this is the field pattern. In this letter, by applying Bloch-Floquet theory, we show that the dispersion diagrams associated with these FP-materials are infinitely degenerate: associated with each point on the dispersion diagram is an infinite space of Bloch functions. Each generalized function is concentrated on a specific field pattern, each parameterized by a variable that we call the launch parameter. The dynamics separates into independent dynamics on the different field patterns, each with the same dispersion relation.

The NESH/Abi-3-based WAVE2 complex is functionally distinct from the Abi-1-based WAVE2 complex.

PubMed

Sekino, Saki; Kashiwagi, Yuriko; Kanazawa, Hitoshi; Takada, Kazuki; Baba, Takashi; Sato, Seiichi; Inoue, Hiroki; Kojima, Masaki; Tani, Katsuko

2015-10-01

Abl interactor (Abi) family proteins play significant roles in actin cytoskeleton organization through participation in the WAVE complex. Mammals possess three Abi proteins: Abi-1, Abi-2, and NESH/Abi-3. Abi-1 and Abi-2 were originally identified as Abl tyrosine kinase-binding proteins. It has been disclosed that Abi-1 acts as a bridge between c-Abl and WAVE2, and c-Abl-mediated WAVE2 phosphorylation promotes actin remodeling. We showed previously that NESH/Abi-3 is present in the WAVE2 complex, but neither binds to c-Abl nor promotes c-Abl-mediated phosphorylation of WAVE2. In this study, we characterized NESH/Abi-3 in more detail, and compared its properties with those of Abi-1 and Abi-2. NESH/Abi-3 was ectopically expressed in NIH3T3 cells, in which Abi-1, but not NESH/Abi-3, is expressed. The expression of NESH/Abi-3 caused degradation of endogenous Abi-1, which led to the formation of a NESH/Abi-3-based WAVE2 complex. When these cells were plated on fibronectin-coated dishes, the translocation of WAVE2 to the plasma membrane was significantly reduced and the formation of peripheral lamellipodial structures was disturbed, suggesting that the NESH/Abi-3-based WAVE2 complex was unable to help produce lamellipodial protrusions. Next, Abi-1, Abi-2, or NESH/Abi-3 was expressed in v-src-transformed NIH3T3 cells. Only in NESH/Abi-3-expressed cells did treatment with an Abl kinase inhibitor, imatinib mesylate, or siRNA-mediated knockdown of c-Abl promote the formation of invadopodia, which are ventral membrane protrusions with extracellular matrix degradation activity. Structural studies showed that a linker region between the proline-rich regions and the Src homology 3 (SH3) domain of Abi-1 is crucial for its interaction with c-Abl and c-Abl-mediated phosphorylation of WAVE2. The NESH/Abi-3-based WAVE2 complex is functionally distinct from the Abi-1-based one, and NESH/Abi-3 may be involved in the formation of ventral protrusions under certain conditions.

A Biologically Constrained, Mathematical Model of Cortical Wave Propagation Preceding Seizure Termination

PubMed Central

González-Ramírez, Laura R.; Ahmed, Omar J.; Cash, Sydney S.; Wayne, C. Eugene; Kramer, Mark A.

2015-01-01

Epilepsy—the condition of recurrent, unprovoked seizures—manifests in brain voltage activity with characteristic spatiotemporal patterns. These patterns include stereotyped semi-rhythmic activity produced by aggregate neuronal populations, and organized spatiotemporal phenomena, including waves. To assess these spatiotemporal patterns, we develop a mathematical model consistent with the observed neuronal population activity and determine analytically the parameter configurations that support traveling wave solutions. We then utilize high-density local field potential data recorded in vivo from human cortex preceding seizure termination from three patients to constrain the model parameters, and propose basic mechanisms that contribute to the observed traveling waves. We conclude that a relatively simple and abstract mathematical model consisting of localized interactions between excitatory cells with slow adaptation captures the quantitative features of wave propagation observed in the human local field potential preceding seizure termination. PMID:25689136

Exploring the resonant vibration of thin plates: Reconstruction of Chladni patterns and determination of resonant wave numbers.

PubMed

Tuan, P H; Wen, C P; Chiang, P Y; Yu, Y T; Liang, H C; Huang, K F; Chen, Y F

2015-04-01

The Chladni nodal line patterns and resonant frequencies for a thin plate excited by an electronically controlled mechanical oscillator are experimentally measured. Experimental results reveal that the resonant frequencies can be fairly obtained by means of probing the variation of the effective impedance of the exciter with and without the thin plate. The influence of the extra mass from the central exciter is confirmed to be insignificant in measuring the resonant frequencies of the present system. In the theoretical aspect, the inhomogeneous Helmholtz equation is exploited to derive the response function as a function of the driving wave number for reconstructing experimental Chladni patterns. The resonant wave numbers are theoretically identified with the maximum coupling efficiency as well as the maximum entropy principle. Substituting the theoretical resonant wave numbers into the derived response function, all experimental Chladni patterns can be excellently reconstructed. More importantly, the dispersion relationship for the flexural wave of the vibrating plate can be determined with the experimental resonant frequencies and the theoretical resonant wave numbers. The determined dispersion relationship is confirmed to agree very well with the formula of the Kirchhoff-Love plate theory.

Binary Black Holes and Gravitational Waves

NASA Technical Reports Server (NTRS)

Centrella, Joan

2007-01-01

The final merger of two black holes releases a tremendous amount of energy, more than the combined light from all the stars in the visible universe. This energy is emitted in the form of gravitational waves, and observing these sources with gravitational wave detectors such as LIGO and LISA requires that we know the pattern or fingerprint of the radiation emitted. Since black hole mergers take place in regions of extreme gravitational fields, we need to solve Einstein's equations of general relativity on a computer in order to calculate these wave patterns. For more than 30 years, scientists have tried to compute these wave patterns. However, their computer codes have been plagued by problems that caused them to crash. This situation has changed dramatically in the past 2 years, with a series of amazing breakthroughs. This discussion examines these gravitational patterns, showing how a spacetime is constructed on a computer to build a simulation laboratory for binary black hole mergers. The focus is on recent advances that are revealing these waveforms, and the dramatic new potential for discoveries that arises when these sources will be observed by the space-based gravitational wave detector LISA.

Binary Black Holes, Numerical Relativity, and Gravitational Waves

NASA Technical Reports Server (NTRS)

Centrella, Joan

2007-01-01

The final merger of two black holes releases a tremendous amount of energy, more than the combined light from all the stars in the visible universe. This energy is emitted in the form of gravitational waves, and observing these sources with gravitational wave detectors such as LISA requires that we know the pattern or fingerprint of the radiation emitted. Since black hole mergers take place in regions of extreme gravitational fields, we need to solve Einstein's equations of general relativity on a computer in order to calculate these wave patterns. For more than 30 years, scientists have tried to compute these wave patterns. However, their computer codes have been plagued by problems that caused them to crash. This situation has changed dramatically in the past 2 years, with a series of amazing breakthroughs. This talk will take you on this quest for these gravitational wave patterns, showing how a spacetime is constructed on a computer to build a simulation laboratory for binary black hole mergers. We will focus on the recent advances that are revealing these waveforms, and the dramatic new potential for discoveries that arises when these sources will be observed by LISA

Cosmic Messengers: Binary Black Holes and Gravitational Waves

NASA Technical Reports Server (NTRS)

Centrella, Joan

2007-01-01

The final merger of two black holes releases a tremendous amount of energy, more than the combined light from all the stars in the visible universe. This energy is emitted in the form of gravitational waves, and observing these sources with gravitational wave detectors such as LISA requires that we know the pattern or fingerprint of the radiation emitted. Since black hole mergers take place in regions of extreme gravitational fields, we need to solve Einstein s equations of general relativity on a computer in order to calculate these wave patterns. For more than 30 years, scientists have tried to compute these wave patterns. However, their computer codes have been plagued by problems that caused them to crash. . This situation has changed dramatically in the past 2 years, with a series of amazing breakthroughs. This talk will take you on this quest for these gravitational wave patterns, showing how a spacetime is constructed on a computer to build a simulation laboratory for binary black hole mergers. We will focus on the recent advances that are revealing these waveforms, and the dramatic new potential for discoveries that arises when these sources will. be observed by LISA.

Position control of desiccation cracks by memory effect and Faraday waves.

PubMed

Nakayama, Hiroshi; Matsuo, Yousuke; Takeshi, Ooshida; Nakahara, Akio

2013-01-01

Pattern formation of desiccation cracks on a layer of a calcium carbonate paste is studied experimentally. This paste is known to exhibit a memory effect, which means that a short-time application of horizontal vibration to the fresh paste predetermines the direction of the cracks that are formed after the paste is dried. While the position of the cracks (as opposed to their direction) is still stochastic in the case of horizontal vibration, the present work reports that their positioning is also controllable, at least to some extent, by applying vertical vibration to the paste and imprinting the pattern of Faraday waves, thus breaking the translational symmetry of the system. The experiments show that the cracks tend to appear in the node zones of the Faraday waves: in the case of stripe-patterned Faraday waves, the cracks are formed twice more frequently in the node zones than in the anti-node zones, presumably due to the localized horizontal motion. As a result of this preference of the cracks to the node zones, the memory of the square lattice pattern of Faraday waves makes the cracks run in the oblique direction differing by 45 degrees from the intuitive lattice direction of the Faraday waves.

New conformal mapping for adaptive resolving of the complex singularities of Stokes wave

PubMed Central

Dyachenko, Sergey A.; A. Silantyev, Denis

2017-01-01

A new highly efficient method is developed for computation of travelling periodic waves (Stokes waves) on the free surface of deep water. A convergence of numerical approximation is determined by the complex singularities above the free surface for the analytical continuation of the travelling wave into the complex plane. An auxiliary conformal mapping is introduced which moves singularities away from the free surface thus dramatically speeding up numerical convergence by adapting the numerical grid for resolving singularities while being consistent with the fluid dynamics. The efficiency of that conformal mapping is demonstrated for the Stokes wave approaching the limiting Stokes wave (the wave of the greatest height) which significantly expands the family of numerically accessible solutions. It allows us to provide a detailed study of the oscillatory approach of these solutions to the limiting wave. Generalizations of the conformal mapping to resolve multiple singularities are also introduced. PMID:28690418

New conformal mapping for adaptive resolving of the complex singularities of Stokes wave.

PubMed

Lushnikov, Pavel M; Dyachenko, Sergey A; A Silantyev, Denis

2017-06-01

A new highly efficient method is developed for computation of travelling periodic waves (Stokes waves) on the free surface of deep water. A convergence of numerical approximation is determined by the complex singularities above the free surface for the analytical continuation of the travelling wave into the complex plane. An auxiliary conformal mapping is introduced which moves singularities away from the free surface thus dramatically speeding up numerical convergence by adapting the numerical grid for resolving singularities while being consistent with the fluid dynamics. The efficiency of that conformal mapping is demonstrated for the Stokes wave approaching the limiting Stokes wave (the wave of the greatest height) which significantly expands the family of numerically accessible solutions. It allows us to provide a detailed study of the oscillatory approach of these solutions to the limiting wave. Generalizations of the conformal mapping to resolve multiple singularities are also introduced.

Comparison of techniques for approximating ocean bottom topography in a wave-refraction computer model

NASA Technical Reports Server (NTRS)

Poole, L. R.

1975-01-01

A study of the effects of using different methods for approximating bottom topography in a wave-refraction computer model was conducted. Approximation techniques involving quadratic least squares, cubic least squares, and constrained bicubic polynomial interpolation were compared for computed wave patterns and parameters in the region of Saco Bay, Maine. Although substantial local differences can be attributed to use of the different approximation techniques, results indicated that overall computed wave patterns and parameter distributions were quite similar.

Denoising in digital speckle pattern interferometry using wave atoms.

PubMed

Federico, Alejandro; Kaufmann, Guillermo H

2007-05-15

We present an effective method for speckle noise removal in digital speckle pattern interferometry, which is based on a wave-atom thresholding technique. Wave atoms are a variant of 2D wavelet packets with a parabolic scaling relation and improve the sparse representation of fringe patterns when compared with traditional expansions. The performance of the denoising method is analyzed by using computer-simulated fringes, and the results are compared with those produced by wavelet and curvelet thresholding techniques. An application of the proposed method to reduce speckle noise in experimental data is also presented.

Lateral Membrane Waves Constitute a Universal Dynamic Pattern of Motile Cells

NASA Astrophysics Data System (ADS)

Döbereiner, Hans-Günther; Dubin-Thaler, Benjamin J.; Hofman, Jake M.; Xenias, Harry S.; Sims, Tasha N.; Giannone, Grégory; Dustin, Michael L.; Wiggins, Chris H.; Sheetz, Michael P.

2006-07-01

We have monitored active movements of the cell circumference on specifically coated substrates for a variety of cells including mouse embryonic fibroblasts and T cells, as well as wing disk cells from fruit flies. Despite having different functions and being from multiple phyla, these cell types share a common spatiotemporal pattern in their normal membrane velocity; we show that protrusion and retraction events are organized in lateral waves along the cell membrane. These wave patterns indicate both spatial and temporal long-range periodic correlations of the actomyosin gel.

High-order rogue waves in vector nonlinear Schrödinger equations.

PubMed

Ling, Liming; Guo, Boling; Zhao, Li-Chen

2014-04-01

We study the dynamics of high-order rogue waves (RWs) in two-component coupled nonlinear Schrödinger equations. We find that four fundamental rogue waves can emerge from second-order vector RWs in the coupled system, in contrast to the high-order ones in single-component systems. The distribution shape can be quadrilateral, triangle, and line structures by varying the proper initial excitations given by the exact analytical solutions. The distribution pattern for vector RWs is more abundant than that for scalar rogue waves. Possibilities to observe these new patterns for rogue waves are discussed for a nonlinear fiber.

Wave interference: mechanics of the standing wave component and the illusion of "which way" information

NASA Astrophysics Data System (ADS)

Hudgins, W. R.; Meulenberg, A.; Penland, R. F.

2015-09-01

Two adjacent coherent light beams, 180° out of phase and traveling on adjacent, parallel paths, remain visibly separated by the null (dark) zone from their mutual interference pattern as they merge. Each half of the pattern can be traced to one of the beams. Does such an experiment provide both "which way" and momentum knowledge? To answer this question, we demonstrate, by examining behavior of wave momentum and energy in a medium, that interfering waves interact. Central to the mechanism of interference is a standing wave component resulting from the combination of coherent waves. We show the mathematics for the formation of the standing wave component and for wave momentum involved in the waves' interaction. In water and in open coaxial cable, we observe that standing waves form cells bounded "reflection zones" where wave momentum from adjacent cells is reversed, confining oscillating energy to each cell. Applying principles observed in standing waves in media to the standing wave component of interfering light beams, we identify dark (null) regions to be the reflection zones. Each part of the interference pattern is affected by interactions between other parts, obscuring "which-way" information. We demonstrated physical interaction experimentally using two beams interfering slightly with one dark zone between them. Blocking one beam "downstream" from the interference region removed the null zone and allowed the remaining beam to evolve to a footprint of a single beam.

A review and reassessment of diffraction, scattering, and shadows in electrodynamics

NASA Astrophysics Data System (ADS)

Berg, Matthew J.; Sorensen, Christopher M.

2018-05-01

The concepts of diffraction and scattering are well known and considered fundamental in optics and other wave phenomena. For any type of wave, one way to define diffraction is the spreading of waves, i.e., no change in the average propagation direction, while scattering is the deflection of waves with a clear change of propagation direction. However, the terms "diffraction" and "scattering" are often used interchangeably, and hence, a clear distinction between the two is difficult to find. This review considers electromagnetic waves and retains the simple definition that diffraction is the spreading of waves but demonstrates that all diffraction patterns are the result of scattering. It is shown that for electromagnetic waves, the "diffracted" wave from an object is the Ewald-Oseen extinction wave in the far-field zone. The intensity distribution of this wave yields what is commonly called the diffraction pattern. Moreover, this is the same Ewald-Oseen wave that cancels the incident wave inside the object and thereafter continues to do so immediately behind the object to create a shadow. If the object is much wider than the beam but has a hole, e.g., a screen with an aperture, the Ewald-Oseen extinction wave creates the shadow behind the screen and the incident light that passes through the aperture creates the diffraction pattern. This point of view also illustrates Babinet's principle. Thus, it is the Ewald-Oseen extinction theorem that binds together diffraction, scattering, and shadows.

Octa- and nonanuclear nickel(II) polyoxometalate clusters: synthesis and electrochemical and magnetic characterizations.

PubMed

Pichon, Céline; Mialane, Pierre; Dolbecq, Anne; Marrot, Jérôme; Rivière, Eric; Bassil, Bassem S; Kortz, Ulrich; Keita, Bineta; Nadjo, Louis; Sécheresse, Francis

2008-12-01

Three high-nuclearity NiII-substituted polyoxometalate compounds functionalized by exogenous ligands have been synthesized and characterized. The octanuclear complexes in Na15[Na{(A-R-SiW9O34)Ni4(CH3COO)3(OH)3}2] . 4NaCl . 36H2O (1) and Na15[Na{(A-R-SiW9O34)Ni4(CH3COO)3(OH)2(N3)}2] . 32H2O (2) can be described as two {Ni4} subunits connected via a {Na(CH3COO)6} group, with the acetato ligands also ensuring in each subunit the connection between the paramagnetic centers. In 2, two azido groups replace two of the six mu-hydroxo ligands present in 1. The nonanuclear complex K7Na7[(A-R-SiW9O34)2Ni9(OH)6(H2O)6(CO3)3] . 42H2O (3) exhibits a double cubanestructure with two [(A-R-SiW9O34)Ni4(OH)3]5- subunits linked by three carbonato ligands. A ninth NiII center connected to one subunit via a carbonato ligand and a O=W group completes this asymmetric polyoxometalate.Electronic spectroscopy and electrochemical studies indicate that, while compounds 1-3 decompose in a pure aqueous medium, these complexes are very stable in a pH 6 acetate medium. The cyclic voltammetry pattern of each complex is constituted by a first eight-electron reduction wave followed by a second large-current intensity wave. The characteristics of the first waves of the complexes are clearly distinct from those obtained for their lacunary precursor [A-R-SiW9O34]10-, a feature that is due to the Ni centers in the complexes. Such observations of electroactive, stable, and highly nickel-rich polyoxometalates are not common. Measurements of the magnetic susceptibility revealed the occurrence of concomitant ferromagnetic and antiferromagnetic interactions in 1 and 3.For both of these compounds, the extension of the magnetic exchange has been determined by means of a spin Hamiltonian with three and four J constants, respectively.

Faraday wave patterns on a square cell network

NASA Astrophysics Data System (ADS)

Peña-Polo, Franklin; Vargas, Carlos A.; Vásquez-González, Benjamín; Medina, Abraham; Trujillo, Leonardo; Klapp, Jaime; Sigalotti, Leonardo Di G.

2017-05-01

We present the experimental observations of the Faraday instability when the vibrated liquid is contained in a network of small square cells for exciting frequencies in the range 10≤ F≤ 24 Hz. A sweep of the parameter space has been performed to investigate the amplitudes and frequencies of the driving force for which different patterns form over the network. Regular patterns in the form of square lattices are observed for driving frequencies in the range 10≤ F<14 Hz, while ordered matrices of oscillons are formed for 1423 Hz, disordered periodic patterns appear within individual cells for a small range of amplitudes. In this case, the wave field is dominated by oscillating blobs that interact on the capillary-gravity scale. A Pearson correlation analysis of the recorded videos shows that for all ordered patterns, the surface waves are periodic and correspond to Faraday waves of dominant frequency equal to half the excitation frequency (i.e., f=F/2). In contrast, the oscillons formed for 1423 Hz are not subharmonic and correspond to periodic harmonic waves with f=nF/2 (for n=2,4,\\ldots ). We find that the experimentally determined minimum forcing necessary to destabilize the rest state and generate surface waves is consistent with a recent stability analysis of stationary solutions as derived from a new dispersion relation for time-periodic waves with nonzero forcing and dissipation.

A connection between the maximum displacements of rogue waves and the dynamics of poles in the complex plane.

PubMed

Liu, T Y; Chiu, T L; Clarkson, P A; Chow, K W

2017-09-01

Rogue waves of evolution systems are displacements which are localized in both space and time. The locations of the points of maximum displacements of the wave profiles may correlate with the trajectories of the poles of the exact solutions from the perspective of complex variables through analytic continuation. More precisely, the location of the maximum height of the rogue wave in laboratory coordinates (real space and time) is conjectured to be equal to the real part of the pole of the exact solution, if the spatial coordinate is allowed to be complex. This feature can be verified readily for the Peregrine breather (lowest order rogue wave) of the nonlinear Schrödinger equation. This connection is further demonstrated numerically here for more complicated scenarios, namely the second order rogue wave of the Boussinesq equation (for bidirectional long waves in shallow water), an asymmetric second order rogue wave for the nonlinear Schrödinger equation (as evolution system for slowly varying wave packets), and a symmetric second order rogue wave of coupled Schrödinger systems. Furthermore, the maximum displacements in physical space occur at a time instant where the trajectories of the poles in the complex plane reverse directions. This property is conjectured to hold for many other systems, and will help to determine the maximum amplitudes of rogue waves.

A connection between the maximum displacements of rogue waves and the dynamics of poles in the complex plane

NASA Astrophysics Data System (ADS)

Liu, T. Y.; Chiu, T. L.; Clarkson, P. A.; Chow, K. W.

2017-09-01

Rogue waves of evolution systems are displacements which are localized in both space and time. The locations of the points of maximum displacements of the wave profiles may correlate with the trajectories of the poles of the exact solutions from the perspective of complex variables through analytic continuation. More precisely, the location of the maximum height of the rogue wave in laboratory coordinates (real space and time) is conjectured to be equal to the real part of the pole of the exact solution, if the spatial coordinate is allowed to be complex. This feature can be verified readily for the Peregrine breather (lowest order rogue wave) of the nonlinear Schrödinger equation. This connection is further demonstrated numerically here for more complicated scenarios, namely the second order rogue wave of the Boussinesq equation (for bidirectional long waves in shallow water), an asymmetric second order rogue wave for the nonlinear Schrödinger equation (as evolution system for slowly varying wave packets), and a symmetric second order rogue wave of coupled Schrödinger systems. Furthermore, the maximum displacements in physical space occur at a time instant where the trajectories of the poles in the complex plane reverse directions. This property is conjectured to hold for many other systems, and will help to determine the maximum amplitudes of rogue waves.

The Effect of the South Asia Monsoon on the Wind Sea and Swell Patterns in the Arabian Sea

NASA Astrophysics Data System (ADS)

Semedo, Alvaro

2015-04-01

Ocean surface gravity waves have a considerable impact on coastal and offshore infrastructures, and are determinant on ship design and routing. But waves also play an important role on the coastal dynamics and beach erosion, and modulate the exchanges of momentum, and mass and other scalars between the atmosphere and the ocean. A constant quantitative and qualitative knowledge of the wave patterns is therefore needed. There are two types of waves at the ocean surface: wind-sea and swell. Wind-sea waves are growing waves under the direct influence of local winds; as these waves propagate away from their generation area, or when their phase speed overcomes the local wind speed, they are called swell. Swell waves can propagate thousands of kilometers across entire ocean basins. The qualitative analysis of ocean surface waves has been the focus of several recent studies, from the wave climate to the air-sea interaction community. The reason for this interest lies mostly in the fact that waves have an impact on the lower atmosphere, and that the air-sea coupling is different depending on the wave regime. Waves modulate the exchange of momentum, heat, and mass across the air-sea interface, and this modulation is different and dependent on the prevalence of one type of waves: wind sea or swell. For fully developed seas the coupling between the ocean-surface and the overlaying atmosphere can be seen as quasi-perfect, in a sense that the momentum transfer and energy dissipation at the ocean surface are in equilibrium. This can only occur in special areas of the Ocean, either in marginal seas, with limited fetch, or in Open Ocean, in areas with strong and persistent wind speed with little or no variation in direction. One of these areas is the Arabian Sea, along the coasts of Somalia, Yemen and Oman. The wind climate in the Arabian sea is under the direct influence of the South Asia monsoon, where the wind blows steady from the northeast during the boreal winter, and reverses direction to blow also steady but stronger from the southwest during the boreal summer months. During the summer monsoon the wind pattern in the north Arabian Sea is rather intricate, with a large scale synoptic forcing with a high pressure cell over the ocean and a thermal low pressure system in-land, but also with at least two low-level wind jets, the Finlater (or Somali) jet, and the Oman coastal jet. This wind pattern leads to a particular wave pattern and seasonal variability. The monsoon wind pattern has a direct influence in the wave climate in that area, The particular wind-sea and swell climates of the Arabian Sea are presented. The study is based on the ERA-Interim wave reanalysis from the European Centre for Medium-Range Weather Forecasts.

Synchronicity and Rhythmicity of Purkinje Cell Firing during Generalized Spike-and-Wave Discharges in a Natural Mouse Model of Absence Epilepsy

PubMed Central

Kros, Lieke; Lindeman, Sander; Eelkman Rooda, Oscar H. J.; Murugesan, Pavithra; Bina, Lorenzo; Bosman, Laurens W. J.; De Zeeuw, Chris I.; Hoebeek, Freek E.

2017-01-01

Absence epilepsy is characterized by the occurrence of generalized spike and wave discharges (GSWDs) in electrocorticographical (ECoG) recordings representing oscillatory activity in thalamocortical networks. The oscillatory nature of GSWDs has been shown to be reflected in the simple spike activity of cerebellar Purkinje cells and in the activity of their target neurons in the cerebellar nuclei, but it is unclear to what extent complex spike activity is implicated in generalized epilepsy. Purkinje cell complex spike firing is elicited by climbing fiber activation and reflects action potential firing in the inferior olive. Here, we investigated to what extent modulation of complex spike firing is reflected in the temporal patterns of seizures. Extracellular single-unit recordings in awake, head-restrained homozygous tottering mice, which suffer from a mutation in the voltage-gated CaV2.1 calcium channel, revealed that a substantial proportion of Purkinje cells (26%) showed increased complex spike activity and rhythmicity during GSWDs. Moreover, Purkinje cells, recorded either electrophysiologically or by using Ca2+-imaging, showed a significant increase in complex spike synchronicity for both adjacent and remote Purkinje cells during ictal events. These seizure-related changes in firing frequency, rhythmicity and synchronicity were most prominent in the lateral cerebellum, a region known to receive cerebral input via the inferior olive. These data indicate profound and widespread changes in olivary firing that are most likely induced by seizure-related activity changes in the thalamocortical network, thereby highlighting the possibility that olivary neurons can compensate for pathological brain-state changes by dampening oscillations. PMID:29163057

Two-dimensional shear wave speed and crawling wave speed recoveries from in vitro prostate data

PubMed Central

Lin, Kui; McLaughlin, Joyce R.; Thomas, Ashley; Parker, Kevin; Castaneda, Benjamin; Rubens, Deborah J.

2011-01-01

The crawling wave experiment was developed to capture a shear wave induced moving interference pattern that is created by two harmonic vibration sources oscillating at different but almost the same frequencies. Using the vibration sonoelastography technique, the spectral variance image reveals a moving interference pattern. It has been shown that the speed of the moving interference pattern, i.e., the crawling wave speed, is proportional to the shear wave speed with a nonlinear factor. This factor can generate high-speed artifacts in the crawling wave speed images that do not actually correspond to increased stiffness. In this paper, an inverse algorithm is developed to reconstruct both the crawling wave speed and the shear wave speed using the phases of the crawling wave and the shear wave. The feature for the data is the application to in vitro prostate data, while the features for the algorithm include the following: (1) A directional filter is implemented to obtain a wave moving in only one direction; and (2) an L1 minimization technique with physics inspired constraints is employed to calculate the phase of the crawling wave and to eliminate jump discontinuities from the phase of the shear wave. The algorithm is tested on in vitro prostate data measured at the Rochester Center for Biomedical Ultrasound and University of Rochester. Each aspect of the algorithm is shown to yield image improvement. The results demonstrate that the shear wave speed images can have less artifacts than the crawling wave images. Examples are presented where the shear wave speed recoveries have excellent agreement with histology results on the size, shape, and location of cancerous tissues in the glands. PMID:21786924

Lamellipodin and the Scar/WAVE complex cooperate to promote cell migration in vivo

PubMed Central

Law, Ah-Lai; Vehlow, Anne; Kotini, Maria; Dodgson, Lauren; Soong, Daniel; Theveneau, Eric; Bodo, Cristian; Taylor, Eleanor; Navarro, Christel; Perera, Upamali; Michael, Magdalene; Dunn, Graham A.; Bennett, Daimark; Mayor, Roberto

2013-01-01

Cell migration is essential for development, but its deregulation causes metastasis. The Scar/WAVE complex is absolutely required for lamellipodia and is a key effector in cell migration, but its regulation in vivo is enigmatic. Lamellipodin (Lpd) controls lamellipodium formation through an unknown mechanism. Here, we report that Lpd directly binds active Rac, which regulates a direct interaction between Lpd and the Scar/WAVE complex via Abi. Consequently, Lpd controls lamellipodium size, cell migration speed, and persistence via Scar/WAVE in vitro. Moreover, Lpd knockout mice display defective pigmentation because fewer migrating neural crest-derived melanoblasts reach their target during development. Consistently, Lpd regulates mesenchymal neural crest cell migration cell autonomously in Xenopus laevis via the Scar/WAVE complex. Further, Lpd’s Drosophila melanogaster orthologue Pico binds Scar, and both regulate collective epithelial border cell migration. Pico also controls directed cell protrusions of border cell clusters in a Scar-dependent manner. Taken together, Lpd is an essential, evolutionary conserved regulator of the Scar/WAVE complex during cell migration in vivo. PMID:24247431

WAVE2 Forms a Complex with PKA and Is Involved in PKA Enhancement of Membrane Protrusions*

PubMed Central

Yamashita, Hiroshi; Ueda, Kazumitsu; Kioka, Noriyuki

2011-01-01

PKA contributes to many physiological processes, including glucose homeostasis and cell migration. The substrate specificity of PKA is low compared with other kinases; thus, complex formation with A-kinase-anchoring proteins is important for the localization of PKA in specific subcellular regions and the phosphorylation of specific substrates. Here, we show that PKA forms a complex with WAVE2 (Wiskott-Aldrich syndrome protein family verprolin-homologous protein 2) in MDA-MB-231 breast cancer cells and mouse brain extracts. Two separate regions of WAVE2 are involved in WAVE2-PKA complex formation. This complex localizes to the leading edge of MDA-MB-231 cells. PKA activation results in enlargement of the membrane protrusion. WAVE2 depletion impairs PKA localization at membrane protrusions and the enlargement of membrane protrusion induced by PKA activation. Together, these results suggest that WAVE2 works as an A-kinase-anchoring protein that recruits PKA at membrane protrusions and plays a role in the enlargement of membrane protrusions induced by PKA activation. PMID:21119216

Influence of fast advective flows on pattern formation of Dictyostelium discoideum

PubMed Central

Bae, Albert; Zykov, Vladimir; Bodenschatz, Eberhard

2018-01-01

We report experimental and numerical results on pattern formation of self-organizing Dictyostelium discoideum cells in a microfluidic setup under a constant buffer flow. The external flow advects the signaling molecule cyclic adenosine monophosphate (cAMP) downstream, while the chemotactic cells attached to the solid substrate are not transported with the flow. At high flow velocities, elongated cAMP waves are formed that cover the whole length of the channel and propagate both parallel and perpendicular to the flow direction. While the wave period and transverse propagation velocity are constant, parallel wave velocity and the wave width increase linearly with the imposed flow. We also observe that the acquired wave shape is highly dependent on the wave generation site and the strength of the imposed flow. We compared the wave shape and velocity with numerical simulations performed using a reaction-diffusion model and found excellent agreement. These results are expected to play an important role in understanding the process of pattern formation and aggregation of D. discoideum that may experience fluid flows in its natural habitat. PMID:29590179

Coherent beam control with an all-dielectric transformation optics based lens

NASA Astrophysics Data System (ADS)

Yi, Jianjia; Burokur, Shah Nawaz; Piau, Gérard-Pascal; de Lustrac, André

2016-01-01

Transformation optics (TO) concept well known for its huge possibility in patterning the path of electromagnetic waves is exploited to design a beam steering lens. The broadband directive in-phase emission in a desired off-normal direction from an array of equally fed radiators is numerically and experimentally reported. Such manipulation is achieved without the use of complex and bulky phase shifters as it is the case in classical phased array antennas. The all-dielectric compact low-cost lens prototype presenting a graded permittivity profile is fabricated through three-dimensional (3D) polyjet printing technology. The array of radiators is composed of four planar microstrip antennas realized using standard lithography techniques and is used as excitation source for the lens. To validate the proposed lens, we experimentally demonstrate the broadband focusing properties and in-phase directive emissions deflected from the normal direction. Both the far-field radiation patterns and the near-field distributions are measured and reported. Measurements agree quantitatively and qualitatively with numerical full-wave simulations and confirm the corresponding steering properties. Such experimental validation paves the way to inexpensive easy-made all-dielectric microwave lenses for beam forming and collimation.

Computational model of cerebral blood flow redistribution during cortical spreading depression

NASA Astrophysics Data System (ADS)

Verisokin, Andrey Y.; Verveyko, Darya V.; Postnov, Dmitry E.

2016-04-01

In recent decades modelling studies on cortical spreading depression (CSD) and migraine waves successfully contributed to formation of modern view on these fundamental phenomena of brain physiology. However, due to the extreme complexity of object under study (brain cortex) and the diversity of involved physiological pathways, the development of new mathematical models of CSD is still a very relevant and challenging research problem. In our study we follow the functional modelling approach aimed to map the action of known physiological pathways to the specific nonlinear mechanisms that govern formation and evolution of CSD wave patterns. Specifically, we address the role of cerebral blood flow (CBF) redistribution that is caused by excessive neuronal activity by means of neurovascular coupling and mediates a spatial pattern of oxygen and glucose delivery. This in turn changes the local metabolic status of neural tissue. To build the model we simplify the web of known cell-to-cell interactions within a neurovascular unit by selecting the most relevant ones, such as local neuron-induced elevation of extracellular potassium concentration and biphasic response of arteriole radius. We propose the lumped description of distance-dependent hemodynamic coupling that fits the most recent experimental findings.

Oxidation-Based Continuous Laser Writing in Vertical Nano-Crystalline Graphite Thin Films

PubMed Central

Loisel, Loïc; Florea, Ileana; Cojocaru, Costel-Sorin; Tay, Beng Kang; Lebental, Bérengère

2016-01-01

Nano and femtosecond laser writing are becoming very popular techniques for patterning carbon-based materials, as they are single-step processes enabling the drawing of complex shapes without photoresist. However, pulsed laser writing requires costly laser sources and is known to cause damages to the surrounding material. By comparison, continuous-wave lasers are cheap, stable and provide energy at a more moderate rate. Here, we show that a continuous-wave laser may be used to pattern vertical nano-crystalline graphite thin films with very few macroscale defects. Moreover, a spatially resolved study of the impact of the annealing to the crystalline structure and to the oxygen ingress in the film is provided: amorphization, matter removal and high oxygen content at the center of the beam; sp2 clustering and low oxygen content at its periphery. These data strongly suggest that amorphization and matter removal are controlled by carbon oxidation. The simultaneous occurrence of oxidation and amorphization results in a unique evolution of the Raman spectra as a function of annealing time, with a decrease of the I(D)/I(G) values but an upshift of the G peak frequency. PMID:27194181

Coherent beam control with an all-dielectric transformation optics based lens.

PubMed

Yi, Jianjia; Burokur, Shah Nawaz; Piau, Gérard-Pascal; de Lustrac, André

2016-01-05

Transformation optics (TO) concept well known for its huge possibility in patterning the path of electromagnetic waves is exploited to design a beam steering lens. The broadband directive in-phase emission in a desired off-normal direction from an array of equally fed radiators is numerically and experimentally reported. Such manipulation is achieved without the use of complex and bulky phase shifters as it is the case in classical phased array antennas. The all-dielectric compact low-cost lens prototype presenting a graded permittivity profile is fabricated through three-dimensional (3D) polyjet printing technology. The array of radiators is composed of four planar microstrip antennas realized using standard lithography techniques and is used as excitation source for the lens. To validate the proposed lens, we experimentally demonstrate the broadband focusing properties and in-phase directive emissions deflected from the normal direction. Both the far-field radiation patterns and the near-field distributions are measured and reported. Measurements agree quantitatively and qualitatively with numerical full-wave simulations and confirm the corresponding steering properties. Such experimental validation paves the way to inexpensive easy-made all-dielectric microwave lenses for beam forming and collimation.

Statistics and classification of the microwave zebra patterns associated with solar flares

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tan, Baolin; Tan, Chengming; Zhang, Yin

2014-01-10

The microwave zebra pattern (ZP) is the most interesting, intriguing, and complex spectral structure frequently observed in solar flares. A comprehensive statistical study will certainly help us to understand the formation mechanism, which is not exactly clear now. This work presents a comprehensive statistical analysis of a big sample with 202 ZP events collected from observations at the Chinese Solar Broadband Radio Spectrometer at Huairou and the Ondŕejov Radiospectrograph in the Czech Republic at frequencies of 1.00-7.60 GHz from 2000 to 2013. After investigating the parameter properties of ZPs, such as the occurrence in flare phase, frequency range, polarization degree,more » duration, etc., we find that the variation of zebra stripe frequency separation with respect to frequency is the best indicator for a physical classification of ZPs. Microwave ZPs can be classified into three types: equidistant ZPs, variable-distant ZPs, and growing-distant ZPs, possibly corresponding to mechanisms of the Bernstein wave model, whistler wave model, and double plasma resonance model, respectively. This statistical classification may help us to clarify the controversies between the existing various theoretical models and understand the physical processes in the source regions.« less

Oxidation-Based Continuous Laser Writing in Vertical Nano-Crystalline Graphite Thin Films

NASA Astrophysics Data System (ADS)

Loisel, Loïc; Florea, Ileana; Cojocaru, Costel-Sorin; Tay, Beng Kang; Lebental, Bérengère

2016-05-01

Nano and femtosecond laser writing are becoming very popular techniques for patterning carbon-based materials, as they are single-step processes enabling the drawing of complex shapes without photoresist. However, pulsed laser writing requires costly laser sources and is known to cause damages to the surrounding material. By comparison, continuous-wave lasers are cheap, stable and provide energy at a more moderate rate. Here, we show that a continuous-wave laser may be used to pattern vertical nano-crystalline graphite thin films with very few macroscale defects. Moreover, a spatially resolved study of the impact of the annealing to the crystalline structure and to the oxygen ingress in the film is provided: amorphization, matter removal and high oxygen content at the center of the beam; sp2 clustering and low oxygen content at its periphery. These data strongly suggest that amorphization and matter removal are controlled by carbon oxidation. The simultaneous occurrence of oxidation and amorphization results in a unique evolution of the Raman spectra as a function of annealing time, with a decrease of the I(D)/I(G) values but an upshift of the G peak frequency.

Nonlinear waves in viscoelastic magnetized complex astroplasmas with polarized dust-charge variations

NASA Astrophysics Data System (ADS)

Das, Papari; Karmakar, Pralay Kumar

2018-01-01

A nonextensive nonthermal magnetized viscoelastic astrofluid, compositionally containing nonthermal electrons and ions together with massive polarized dust micro-spherical grains of variable electric charge, is allowed to endure weakly nonlinear perturbation around its equilibrium. The nonextensivity originating from the large-scale non-local effects is included via the Tsallis thermo-statistical distribution laws describing the lighter species. Assuming the equilibrium as a homogeneous hydrostatic one, the dust polarization effects are incorporated via the conventional homogeneous polarization force law. The perturbed fluid model evolves as a unique conjugate pair of coupled extended Korteweg-de Vries (e-KdV) equations. A constructed numerical tapestry shows the collective excitations of a new pair of distinct classes of nonlinear mode structures in new parametric space. The first family indicates periodic electrostatic compressive eigenmodes in the form of soliton-chains. Likewise, the second one reveals gravitational rarefactive solitary patterns. Their microphysical multi-parametric dependencies of the eigen-patterns are illustratively analyzed and bolstered. The paper ends up with some promising implications and applications in the astro-cosmo-plasmic context of wave-induced accretive triggering processes responsible for gravitationally bounded (gravito-condensed) astro-structure formation, such as stellesimals, planetsimals, etc.

SHEAR WAVE DISPERSION MEASURES LIVER STEATOSIS

PubMed Central

Barry, Christopher T.; Mills, Bradley; Hah, Zaegyoo; Mooney, Robert A.; Ryan, Charlotte K.; Rubens, Deborah J.; Parker, Kevin J.

2012-01-01

Crawling waves, which are interfering shear wave patterns, can be generated in liver tissue over a range of frequencies. Some important biomechanical properties of the liver can be determined by imaging the crawling waves using Doppler techniques and analyzing the patterns. We report that the dispersion of shear wave velocity and attenuation, that is, the frequency dependence of these parameters, are strongly correlated with the degree of steatosis in a mouse liver model, ex vivo. The results demonstrate the possibility of assessing liver steatosis using noninvasive imaging methods that are compatible with color Doppler scanners and, furthermore, suggest that liver steatosis can be separated from fibrosis by assessing the dispersion or frequency dependence of shear wave propagations. PMID:22178165

Dengue dynamics in Binh Thuan province, southern Vietnam: periodicity, synchronicity and climate variability.

PubMed

Thai, Khoa T D; Cazelles, Bernard; Nguyen, Nam Van; Vo, Long Thi; Boni, Maciej F; Farrar, Jeremy; Simmons, Cameron P; van Doorn, H Rogier; de Vries, Peter J

2010-07-13

Dengue is a major global public health problem with increasing incidence and geographic spread. The epidemiology is complex with long inter-epidemic intervals and endemic with seasonal fluctuations. This study was initiated to investigate dengue transmission dynamics in Binh Thuan province, southern Vietnam. Wavelet analyses were performed on time series of monthly notified dengue cases from January 1994 to June 2009 (i) to detect and quantify dengue periodicity, (ii) to describe synchrony patterns in both time and space, (iii) to investigate the spatio-temporal waves and (iv) to associate the relationship between dengue incidence and El Niño-Southern Oscillation (ENSO) indices in Binh Thuan province, southern Vietnam. We demonstrate a continuous annual mode of oscillation and a multi-annual cycle of around 2-3-years was solely observed from 1996-2001. Synchrony in time and between districts was detected for both the annual and 2-3-year cycle. Phase differences used to describe the spatio-temporal patterns suggested that the seasonal wave of infection was either synchronous among all districts or moving away from Phan Thiet district. The 2-3-year periodic wave was moving towards, rather than away from Phan Thiet district. A strong non-stationary association between ENSO indices and climate variables with dengue incidence in the 2-3-year periodic band was found. A multi-annual mode of oscillation was observed and these 2-3-year waves of infection probably started outside Binh Thuan province. Associations with climatic variables were observed with dengue incidence. Here, we have provided insight in dengue population transmission dynamics over the past 14.5 years. Further studies on an extensive time series dataset are needed to test the hypothesis that epidemics emanate from larger cities in southern Vietnam.

Transition of spiral calcium waves between multiple stable patterns can be triggered by a single calcium spark in a fire-diffuse-fire model

PubMed Central

Tang, Ai-Hui; Wang, Shi-Qiang

2009-01-01

Spiral patterns have been found in various nonequilibrium systems. The Ca2+-induced Ca2+ release system in single cardiac cells is unique for highly discrete reaction elements, each giving rise to a Ca2+ spark upon excitation. We imaged the spiral Ca2+ waves in isolated cardiac cells and numerically studied the effect of system excitability on spiral patterns using a two-dimensional fire-diffuse-fire model. We found that under certain conditions, the system was able to display multiple stable patterns of spiral waves, each exhibiting different periods and distinct routines of spiral tips. Transition between these different patterns could be triggered by an internal fluctuation in the form of a single Ca2+ spark. PMID:19792039

Transition of spiral calcium waves between multiple stable patterns can be triggered by a single calcium spark in a fire-diffuse-fire model.

PubMed

Tang, Ai-Hui; Wang, Shi-Qiang

2009-09-01

Spiral patterns have been found in various nonequilibrium systems. The Ca(2+)-induced Ca(2+) release system in single cardiac cells is unique for highly discrete reaction elements, each giving rise to a Ca(2+) spark upon excitation. We imaged the spiral Ca(2+) waves in isolated cardiac cells and numerically studied the effect of system excitability on spiral patterns using a two-dimensional fire-diffuse-fire model. We found that under certain conditions, the system was able to display multiple stable patterns of spiral waves, each exhibiting different periods and distinct routines of spiral tips. Transition between these different patterns could be triggered by an internal fluctuation in the form of a single Ca(2+) spark.

Waves and patterning in developmental biology: vertebrate segmentation and feather bud formation as case studies

PubMed Central

Baker, Ruth E.; Schnell, Santiago; Maini, Philip K.

2014-01-01

In this article we will discuss the integration of developmental patterning mechanisms with waves of competency that control the ability of a homogeneous field of cells to react to pattern forming cues and generate spatially heterogeneous patterns. We base our discussion around two well known patterning events that take place in the early embryo: somitogenesis and feather bud formation. We outline mathematical models to describe each patterning mechanism, present the results of numerical simulations and discuss the validity of each model in relation to our example patterning processes. PMID:19557684

Interference patterns in the Spacelab 2 plasma wave data - Oblique electrostatic waves generated by the electron beam

NASA Technical Reports Server (NTRS)

Feng, Wei; Gurnett, Donald A.; Cairns, Iver H.

1992-01-01

During the Spacelab 2 mission the University of Iowa's Plasma Diagnostics Package (PDP) explored the plasma environment around the shuttle. Wideband spectrograms of plasma waves were obtained from the PDP at frequencies of 0-30 kHz and at distances up to 400 m from the shuttle. Strong low-frequency (below 10 kHz) electric field noise was observed in the wideband data during two periods in which an electron beam was ejected from the shuttle. This noise shows clear evidence of interference patterns caused by the finite (3.89 m) antenna length. The low-frequency noise was the most dominant type of noise produced by the ejected electron beam. Analysis of antenna interference patterns generated by these waves permits a determination of the wavelength, the direction of propagation, and the location of the source region. The observed waves have a linear dispersion relation very similar to that of ion acoustic waves. The waves are believed to be oblique ion acoustic or high-order ion cyclotron waves generated by a current of ambient electrons returning to the shuttle in response to the ejected electron beam.

Caustics and Rogue Waves in an Optical Sea.

PubMed

Mathis, Amaury; Froehly, Luc; Toenger, Shanti; Dias, Frédéric; Genty, Goëry; Dudley, John M

2015-08-06

There are many examples in physics of systems showing rogue wave behaviour, the generation of high amplitude events at low probability. Although initially studied in oceanography, rogue waves have now been seen in many other domains, with particular recent interest in optics. Although most studies in optics have focussed on how nonlinearity can drive rogue wave emergence, purely linear effects have also been shown to induce extreme wave amplitudes. In this paper, we report a detailed experimental study of linear rogue waves in an optical system, using a spatial light modulator to impose random phase structure on a coherent optical field. After free space propagation, different random intensity patterns are generated, including partially-developed speckle, a broadband caustic network, and an intermediate pattern with characteristics of both speckle and caustic structures. Intensity peaks satisfying statistical criteria for rogue waves are seen especially in the case of the caustic network, and are associated with broader spatial spectra. In addition, the electric field statistics of the intermediate pattern shows properties of an "optical sea" with near-Gaussian statistics in elevation amplitude, and trough-to-crest statistics that are near-Rayleigh distributed but with an extended tail where a number of rogue wave events are observed.

Caustics and Rogue Waves in an Optical Sea

PubMed Central

Mathis, Amaury; Froehly, Luc; Toenger, Shanti; Dias, Frédéric; Genty, Goëry; Dudley, John M.

2015-01-01

There are many examples in physics of systems showing rogue wave behaviour, the generation of high amplitude events at low probability. Although initially studied in oceanography, rogue waves have now been seen in many other domains, with particular recent interest in optics. Although most studies in optics have focussed on how nonlinearity can drive rogue wave emergence, purely linear effects have also been shown to induce extreme wave amplitudes. In this paper, we report a detailed experimental study of linear rogue waves in an optical system, using a spatial light modulator to impose random phase structure on a coherent optical field. After free space propagation, different random intensity patterns are generated, including partially-developed speckle, a broadband caustic network, and an intermediate pattern with characteristics of both speckle and caustic structures. Intensity peaks satisfying statistical criteria for rogue waves are seen especially in the case of the caustic network, and are associated with broader spatial spectra. In addition, the electric field statistics of the intermediate pattern shows properties of an “optical sea” with near-Gaussian statistics in elevation amplitude, and trough-to-crest statistics that are near-Rayleigh distributed but with an extended tail where a number of rogue wave events are observed. PMID:26245864

Deep Learning for Discovery of Atmospheric Mountain Waves in MODIS and GPS Data

NASA Astrophysics Data System (ADS)

Pankratius, V.; Li, J. D.; Rude, C. M.; Gowanlock, M.; Herring, T.

2017-12-01

Airflow over mountains can produce gravity waves, called lee waves, which can generate atmospheric turbulence. Since this turbulence poses dangers to aviation, it is critical to identify such regions reliably in an automated fashion. This work leverages two sources of data to go beyond an ad-hoc human visual approach for such identification: MODIS imagery containing cloud patterns formed by lee waves, and patterns in GPS signals resulting from the transmission through atmospheric turbulence due to lee waves. We demonstrate a novel machine learning approach that fuses these two data types to detect atmospheric turbulence associated with lee waves. A convolutional neural network is trained on MODIS tile images to automatically classify the lee wave cloud patterns with 96% correct classifications on a validation set of 20,000 MODIS 64x64 tiles over a test region in the Sierra Nevada Mountains. Signals from GPS stations of the Plate Boundary Observatory are used for feature extraction related to lee waves, in order to improve the confidence of a detection in the MODIS imagery at a given position. To our knowledge, this is the first technique to combine these images and time series data types to improve the spatial and temporal resolutions for large-scale measurements of lee wave formations. First results of this work show great potential for improving weather condition monitoring, hazard and cloud pattern detection, as well as GPS navigation uncertainties. We acknowledge support from NASA AISTNNX15AG84G (PI Pankratius), NASA NNX14AQ03G (PI Herring), and NSF ACI1442997 (PI Pankratius).

Fabrication and single-electron-transfer operation of a triple-dot single-electron transistor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jo, Mingyu, E-mail: mingyujo@eis.hokudai.ac.jp; Uchida, Takafumi; Tsurumaki-Fukuchi, Atsushi

2015-12-07

A triple-dot single-electron transistor was fabricated on silicon-on-insulator wafer using pattern-dependent oxidation. A specially designed one-dimensional silicon wire having small constrictions at both ends was converted to a triple-dot single-electron transistor by means of pattern-dependent oxidation. The fabrication of the center dot involved quantum size effects and stress-induced band gap reduction, whereas that of the two side dots involved thickness modulation because of the complex edge structure of two-dimensional silicon. Single-electron turnstile operation was confirmed at 8 K when a 100-mV, 1-MHz square wave was applied. Monte Carlo simulations indicated that such a device with inhomogeneous tunnel and gate capacitances canmore » exhibit single-electron transfer.« less

Computing Cosmic Cataclysms

NASA Technical Reports Server (NTRS)

Centrella, Joan M.

2010-01-01

The final merger of two black holes releases a tremendous amount of energy, more than the combined light from all the stars in the visible universe. This energy is emitted in the form of gravitational waves, and observing these sources with gravitational wave detectors requires that we know the pattern or fingerprint of the radiation emitted. Since black hole mergers take place in regions of extreme gravitational fields, we need to solve Einstein's equations of general relativity on a computer in order to calculate these wave patterns. For more than 30 years, scientists have tried to compute these wave patterns. However, their computer codes have been plagued by problems that caused them to crash. This situation has changed dramatically in the past few years, with a series of amazing breakthroughs. This talk will take you on this quest for these gravitational wave patterns, showing how a spacetime is constructed on a computer to build a simulation laboratory for binary black hole mergers. We will focus on the recent advances that are revealing these waveforms, and the dramatic new potential for discoveries that arises when these sources will be observed.

Association between ICP pulse waveform morphology and ICP B waves.

PubMed

Kasprowicz, Magdalena; Bergsneider, Marvin; Czosnyka, Marek; Hu, Xiao

2012-01-01

The study aimed to investigate changes in the shape of ICP pulses associated with different patterns of the ICP slow waves (0.5-2.0 cycles/min) during ICP overnight monitoring in hydrocephalus. Four patterns of ICP slow waves were characterized in 44 overnight ICP recordings (no waves - NW, slow symmetrical waves - SW, slow asymmetrical waves - AS, slow waves with plateau phase - PW). The morphological clustering and analysis of ICP pulse (MOCAIP) algorithm was utilized to calculate a set of metrics describing ICP pulse morphology based on the location of three sub-peaks in an ICP pulse: systolic peak (P(1)), tidal peak (P(2)) and dicrotic peak (P(3)). Step-wise discriminant analysis was applied to select the most characteristic morphological features to distinguish between different ICP slow waves. Based on relative changes in variability of amplitudes of P(2) and P(3) we were able to distinguish between the combined groups NW + SW and AS + PW (p < 0.000001). The AS pattern can be differentiated from PW based on respective changes in the mean curvature of P(2) and P(3) (p < 0.000001); however, none of the MOCAIP feature separates between NW and SW. The investigation of ICP pulse morphology associated with different ICP B waves may provide additional information for analysing recordings of overnight ICP.

Prenatal thalamic waves regulate cortical area size prior to sensory processing.

PubMed

Moreno-Juan, Verónica; Filipchuk, Anton; Antón-Bolaños, Noelia; Mezzera, Cecilia; Gezelius, Henrik; Andrés, Belen; Rodríguez-Malmierca, Luis; Susín, Rafael; Schaad, Olivier; Iwasato, Takuji; Schüle, Roland; Rutlin, Michael; Nelson, Sacha; Ducret, Sebastien; Valdeolmillos, Miguel; Rijli, Filippo M; López-Bendito, Guillermina

2017-02-03

The cerebral cortex is organized into specialized sensory areas, whose initial territory is determined by intracortical molecular determinants. Yet, sensory cortical area size appears to be fine tuned during development to respond to functional adaptations. Here we demonstrate the existence of a prenatal sub-cortical mechanism that regulates the cortical areas size in mice. This mechanism is mediated by spontaneous thalamic calcium waves that propagate among sensory-modality thalamic nuclei up to the cortex and that provide a means of communication among sensory systems. Wave pattern alterations in one nucleus lead to changes in the pattern of the remaining ones, triggering changes in thalamic gene expression and cortical area size. Thus, silencing calcium waves in the auditory thalamus induces Rorβ upregulation in a neighbouring somatosensory nucleus preluding the enlargement of the barrel-field. These findings reveal that embryonic thalamic calcium waves coordinate cortical sensory area patterning and plasticity prior to sensory information processing.

Prenatal thalamic waves regulate cortical area size prior to sensory processing

PubMed Central

Moreno-Juan, Verónica; Filipchuk, Anton; Antón-Bolaños, Noelia; Mezzera, Cecilia; Gezelius, Henrik; Andrés, Belen; Rodríguez-Malmierca, Luis; Susín, Rafael; Schaad, Olivier; Iwasato, Takuji; Schüle, Roland; Rutlin, Michael; Nelson, Sacha; Ducret, Sebastien; Valdeolmillos, Miguel; Rijli, Filippo M.; López-Bendito, Guillermina

2017-01-01

The cerebral cortex is organized into specialized sensory areas, whose initial territory is determined by intracortical molecular determinants. Yet, sensory cortical area size appears to be fine tuned during development to respond to functional adaptations. Here we demonstrate the existence of a prenatal sub-cortical mechanism that regulates the cortical areas size in mice. This mechanism is mediated by spontaneous thalamic calcium waves that propagate among sensory-modality thalamic nuclei up to the cortex and that provide a means of communication among sensory systems. Wave pattern alterations in one nucleus lead to changes in the pattern of the remaining ones, triggering changes in thalamic gene expression and cortical area size. Thus, silencing calcium waves in the auditory thalamus induces Rorβ upregulation in a neighbouring somatosensory nucleus preluding the enlargement of the barrel-field. These findings reveal that embryonic thalamic calcium waves coordinate cortical sensory area patterning and plasticity prior to sensory information processing. PMID:28155854

Guided solitary waves.

PubMed

Miles, J

1980-04-01

Transversely periodic solitary-wave solutions of the Boussinesq equations (which govern wave propagation in a weakly dispersive, weakly nonlinear physical system) are determined. The solutions for negative dispersion (e.g., gravity waves) are singular and therefore physically unacceptable. The solutions for positive dispersion (e.g., capillary waves or magnetosonic waves in a plasma) are physically acceptable except in a limited parametric interval, in which they are complex. The two end points of this interval are associated with (two different) resonant interactions among three basic solitary waves, two of which are two-dimensional complex conjugates and the third of which is one-dimensional and real.

Modelling the hydrodynamic and morphosedimentary response of an beach-headland system (Algarve, Southern Portugal)

NASA Astrophysics Data System (ADS)

Horta, João; Oliveira, Sónia; Moura, Delminda

2015-04-01

Future behaviour of beaches within a headland-beach system is of fundamental interest on coastal evolution since they act as a buffer between the waves' attack and the cliffs backing them. The beaches at the cliffs' foot anchored between headlands are space-limited environments to morphosedimentary processes. Additionally, headlands and shore platforms are natural barriers to the alongshore drift. Several attempts to develop numerical expressions to characterize the stability of headland-beach systems have been made based mainly on linear parameters. However, in the sandy areas occur volumetric variations of greater magnitude that changes in the shoreline position in a tidal cycle. This work aims to quantify the balance between the incoming and the lost sediment in two embayed beaches in order to improve knowledge of the sedimentary dynamics of such environments and therefore the evolution of coastal landscapes. The study area is the Algarve coastal karstic landscapes, which raises challenging questions on morphosedimentary processes because it has dozens of stacks and cavities both in the surf zone and in the nearshore that interfere with the littoral current patterns. The field campaigns were performed during spring tide conditions in February and March, 2011. The nearshore wave climate and the current's velocity and direction were measured using respectively a non-vented Level TROLL 700 Pressure Transducer (PT) and an autonomously deployable electro-magnetic current meter (EMCM) Infinity-EM with a data logger. The offshore wave data used was acquired through the Portuguese Hydrographic Institute (IH) at the Faro buoy, located 50 km southeast from the study area. The topographic surveys were performed for a total area of about 1500 m2 using two Global Navigation Satellite System receptors (GPS Trimble R6 and GPS Trimble 5800) in real-time kinematic mode (RTK) with differential global positioning system (DGPS) providing centimetric accuracy. The altimetric values ranged between -2 and +6 m (mean sea level-msl). The automatic determination of the spatial characteristics of the beach morphology results from the GIS tools. The wave and current post processing was made using the STWAVE and Bouss-2D model software. Our results showed that: (i) the shore orientation is the major factor for the height of the waves approaching the coast (considering the same offshore climate) and thus to the wave energy input to transport sediment, (ii) the shore platforms which extend up to -7 m (msl) determine a very irregular pattern of the shoaling waves and distance of the breaking point from the shoreline, (iii) as a consequence of (ii) the rip currents in the surf zone show a very complex pattern and the direction of the sedimentary transport can be opposite to the direction of the incoming waves, (iv) the pattern of the rip currents is highly variable depending on the water depth, (v) the results obtained for volumetric balances showed a negative balance (erosion higher than accretion) at the smaller embayed beach and a positive balance (accretion higher than erosion) at the larger one. This work is a contribution to the PTDC/GEO-GEO/3981/2012 funded by the Portuguese Foundation for Science and Technology.

Focusing Leaky Waves: A Class of Electromagnetic Localized Waves with Complex Spectra

NASA Astrophysics Data System (ADS)

Fuscaldo, Walter; Comite, Davide; Boesso, Alessandro; Baccarelli, Paolo; Burghignoli, Paolo; Galli, Alessandro

2018-05-01

Localized waves, i.e., the wide class of limited-diffraction, limited-dispersion solutions to the wave equation are generally characterized by real wave numbers. We consider the role played by localized waves with generally complex "leaky" wave numbers. First, the impact of the imaginary part of the wave number (i.e., the leakage constant) on the diffractive (spatial broadening) features of monochromatic localized solutions (i.e., beams) is rigorously evaluated. Then general conditions are derived to show that only a restricted class of spectra (either real or complex) allows for generating a causal localized wave. It turns out that backward leaky waves fall into this category. On this ground, several criteria for the systematic design of wideband radiators, namely, periodic radial waveguides based on backward leaky waves, are established in the framework of leaky-wave theory. An effective design method is proposed to minimize the frequency dispersion of the proposed class of devices and the impact of the "leakage" on the dispersive (temporal broadening) features of polychromatic localized solutions (i.e., pulses) is accounted for. Numerical results corroborate the concept, clearly highlighting the advantages and limitations of the leaky-wave approach for the generation of localized pulses at millimeter-wave frequencies, where energy focusing is in high demand in modern applications.

Measurements of wind-waves under transient wind conditions.

NASA Astrophysics Data System (ADS)

Shemer, Lev; Zavadsky, Andrey

2015-11-01

Wind forcing in nature is always unsteady, resulting in a complicated evolution pattern that involves numerous time and space scales. In the present work, wind waves in a laboratory wind-wave flume are studied under unsteady forcing`. The variation of the surface elevation is measured by capacitance wave gauges, while the components of the instantaneous surface slope in across-wind and along-wind directions are determined by a regular or scanning laser slope gauge. The locations of the wave gauge and of the laser slope gauge are separated by few centimeters in across-wind direction. Instantaneous wind velocity was recorded simultaneously using Pitot tube. Measurements are performed at a number of fetches and for different patterns of wind velocity variation. For each case, at least 100 independent realizations were recorded for a given wind velocity variation pattern. The accumulated data sets allow calculating ensemble-averaged values of the measured parameters. Significant differences between the evolution patterns of the surface elevation and of the slope components were found. Wavelet analysis was applied to determine dominant wave frequency of the surface elevation and of the slope variation at each instant. Corresponding ensemble-averaged values acquired by different sensors were computed and compared. Analysis of the measured ensemble-averaged quantities at different fetches makes it possible to identify different stages in the wind-wave evolution and to estimate the appropriate time and length scales.

The observation of negative permittivity in stripe and bubble phases

NASA Astrophysics Data System (ADS)

Smet, Jurgen

The physics of itinerant two-dimensional electrons is by and large governed by repulsive Coulomb forces. However, cases exist where the interplay of attractive and repulsive interaction components may instigate spontaneous symmetry lowering and clustering of charges in geometric patterns such as bubbles and stripes, provided these interactions act on different length scales. The existence of these phases in higher Landau levels has so far been concluded from transport behavior. Here, we report surface acoustic wave experiments. They probe the permittivity at small wave vector. This technique offers true directionality, whereas in transport the current distribution is complex and strongly affected by the inhomogeneous density pattern. Outside the charge density wave regime, the measured permittivity is always positive. However, negative permittivity is observed in the bubble phase irrespective of the propagation direction. For the stripe phase the permittivity takes on both positive as well as negative values depending on the propagation direction. This confirms the stripe phase to be a strongly anisotropic medium. The observation of negative permittivity is considered an immediate consequence of the exchange related attractive interaction. It makes charge clustering favorable in higher Landau levels where the repulsive direct Coulomb interaction acts on a longer length scale and is responsible for a negative compressibility of the electronic system. This work has been carried out with B. Friess, K. von Klitzing (MPI-FKF), Y. Peng, F. von Oppen (FU Berlin), B. Rosenow (Uni Leipzig) and V. Umansky (Weizmann Institute of Science).

WAVE2 regulates epithelial morphology and cadherin isoform switching through regulation of Twist and Abl.

PubMed

Bryce, Nicole S; Reynolds, Albert B; Koleske, Anthony J; Weaver, Alissa M

2013-01-01

Epithelial morphogenesis is a dynamic process that involves coordination of signaling and actin cytoskeletal rearrangements. We analyzed the contribution of the branched actin regulator WAVE2 in the development of 3-dimensional (3D) epithelial structures. WAVE2-knockdown (WAVE2-KD) cells formed large multi-lobular acini that continued to proliferate at an abnormally late stage compared to control acini. Immunostaining of the cell-cell junctions of WAVE2-KD acini revealed weak and heterogeneous E-cadherin staining despite little change in actin filament localization to the same junctions. Analysis of cadherin expression demonstrated a decrease in E-cadherin and an increase in N-cadherin protein and mRNA abundance in total cell lysates. In addition, WAVE2-KD cells exhibited an increase in the mRNA levels of the epithelial-mesenchymal transition (EMT)-associated transcription factor Twist1. KD of Twist1 expression in WAVE2-KD cells reversed the cadherin switching and completely rescued the aberrant 3D morphological phenotype. Activity of the WAVE2 complex binding partner Abl kinase was also increased in WAVE2-KD cells, as assessed by tyrosine phosphorylation of the Abl substrate CrkL. Inhibition of Abl with STI571 rescued the multi-lobular WAVE2-KD 3D phenotype whereas overexpression of Abl kinase phenocopied the WAVE2-KD phenotype. The WAVE2 complex regulates breast epithelial morphology by a complex mechanism involving repression of Twist1 expression and Abl kinase activity. These data reveal a critical role for WAVE2 complex in regulation of cellular signaling and epithelial morphogenesis.

A novel role for WAVE1 in controlling actin network growth rate and architecture.

PubMed

Sweeney, Meredith O; Collins, Agnieszka; Padrick, Shae B; Goode, Bruce L

2015-02-01

Branched actin filament networks in cells are assembled through the combined activities of Arp2/3 complex and different WASP/WAVE proteins. Here we used TIRF and electron microscopy to directly compare for the first time the assembly kinetics and architectures of actin filament networks produced by Arp2/3 complex and dimerized VCA regions of WAVE1, WAVE2, or N-WASP. WAVE1 produced strikingly different networks from WAVE2 or N-WASP, which comprised unexpectedly short filaments. Further analysis showed that the WAVE1-specific activity stemmed from an inhibitory effect on filament elongation both in the presence and absence of Arp2/3 complex, which was observed even at low stoichiometries of WAVE1 to actin monomers, precluding an effect from monomer sequestration. Using a series of VCA chimeras, we mapped the elongation inhibitory effects of WAVE1 to its WH2 ("V") domain. Further, mutating a single conserved lysine residue potently disrupted WAVE1's inhibitory effects. Taken together, our results show that WAVE1 has unique activities independent of Arp2/3 complex that can govern both the growth rates and architectures of actin filament networks. Such activities may underlie previously observed differences between the cellular functions of WAVE1 and WAVE2. © 2015 Sweeney et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

Mechanically induced intercellular calcium communication in confined endothelial structures.

PubMed

Junkin, Michael; Lu, Yi; Long, Juexuan; Deymier, Pierre A; Hoying, James B; Wong, Pak Kin

2013-03-01

Calcium signaling in the diverse vascular structures is regulated by a wide range of mechanical and biochemical factors to maintain essential physiological functions of the vasculature. To properly transmit information, the intercellular calcium communication mechanism must be robust against various conditions in the cellular microenvironment. Using plasma lithography geometric confinement, we investigate mechanically induced calcium wave propagation in networks of human umbilical vein endothelial cells organized. Endothelial cell networks with confined architectures were stimulated at the single cell level, including using capacitive force probes. Calcium wave propagation in the network was observed using fluorescence calcium imaging. We show that mechanically induced calcium signaling in the endothelial networks is dynamically regulated against a wide range of probing forces and repeated stimulations. The calcium wave is able to propagate consistently in various dimensions from monolayers to individual cell chains, and in different topologies from linear patterns to cell junctions. Our results reveal that calcium signaling provides a robust mechanism for cell-cell communication in networks of endothelial cells despite the diversity of the microenvironmental inputs and complexity of vascular structures. Copyright © 2012 Elsevier Ltd. All rights reserved.

Optimal resolution in Fresnel incoherent correlation holographic fluorescence microscopy

PubMed Central

Brooker, Gary; Siegel, Nisan; Wang, Victor; Rosen, Joseph

2011-01-01

Fresnel Incoherent Correlation Holography (FINCH) enables holograms and 3D images to be created from incoherent light with just a camera and spatial light modulator (SLM). We previously described its application to microscopic incoherent fluorescence wherein one complex hologram contains all the 3D information in the microscope field, obviating the need for scanning or serial sectioning. We now report experiments which have led to the optimal optical, electro-optic, and computational conditions necessary to produce holograms which yield high quality 3D images from fluorescent microscopic specimens. An important improvement from our previous FINCH configurations capitalizes on the polarization sensitivity of the SLM so that the same SLM pixels which create the spherical wave simulating the microscope tube lens, also pass the plane waves from the infinity corrected microscope objective, so that interference between the two wave types at the camera creates a hologram. This advance dramatically improves the resolution of the FINCH system. Results from imaging a fluorescent USAF pattern and a pollen grain slide reveal resolution which approaches the Rayleigh limit by this simple method for 3D fluorescent microscopic imaging. PMID:21445140

Externally driven magnetic granular layers at a liquid/air interface: self-organization, flows and magnetic order

NASA Astrophysics Data System (ADS)

Snezhko, Alexey

2007-03-01

Collective dynamics and pattern formation in ensembles of magnetic microparticles suspended at the liquid/air interface and subjected to an alternating magnetic field are studied. Experiments reveal a new type of nontrivially ordered dynamic self-assembled structures (``snakes'') emerging in such systems in a certain range of field magnitudes and frequencies. These remarkable structures are directly related to surface waves in the liquid generated by the collective response of magnetic microparticles to the alternating magnetic field. In addition, a large-scale vortex flows are induced in the vicinity of the dynamic structures. Some features of the self-localized snake structures can be understood in the framework of an amplitude equation for parametric waves coupled to the conservation law equation describing the evolution of the magnetic particle density. Self-assembled snakes have a complex magnetic order: the segments of the snake exhibit long-range antiferromagnetic ordering mediated by the surface wave, while each segment is composed of ferromagnetically aligned chains of microparticles. A phenomenological model describing magnetic behavior of the magnetic snakes in external magnetic fields is proposed.

Density waves at the interface of a binary complex plasma

NASA Astrophysics Data System (ADS)

Yang, Li; Schwabe, Mierk; Zhdanov, Sergey; Thomas, Hubertus M.; Lipaev, Andrey M.; Molotkov, Vladimir I.; Fortov, Vladimir E.; Zhang, Jing; Du, Cheng-Ran

2017-01-01

Density waves were studied in a phase-separated binary complex plasma under microgravity conditions. For the big particles, waves were self-excited by the two-stream instability, while for small particles, they were excited by heartbeat instability with the presence of reversed propagating pulses of a different frequency. By studying the dynamics of wave crests at the interface, we recognize a “collision zone” and a “merger zone” before and after the interface, respectively. The results provide a generic picture of wave-wave interaction at the interface between two “mediums”.

Self-consistent adjoint analysis for topology optimization of electromagnetic waves

NASA Astrophysics Data System (ADS)

Deng, Yongbo; Korvink, Jan G.

2018-05-01

In topology optimization of electromagnetic waves, the Gâteaux differentiability of the conjugate operator to the complex field variable results in the complexity of the adjoint sensitivity, which evolves the original real-valued design variable to be complex during the iterative solution procedure. Therefore, the self-inconsistency of the adjoint sensitivity is presented. To enforce the self-consistency, the real part operator has been used to extract the real part of the sensitivity to keep the real-value property of the design variable. However, this enforced self-consistency can cause the problem that the derived structural topology has unreasonable dependence on the phase of the incident wave. To solve this problem, this article focuses on the self-consistent adjoint analysis of the topology optimization problems for electromagnetic waves. This self-consistent adjoint analysis is implemented by splitting the complex variables of the wave equations into the corresponding real parts and imaginary parts, sequentially substituting the split complex variables into the wave equations with deriving the coupled equations equivalent to the original wave equations, where the infinite free space is truncated by the perfectly matched layers. Then, the topology optimization problems of electromagnetic waves are transformed into the forms defined on real functional spaces instead of complex functional spaces; the adjoint analysis of the topology optimization problems is implemented on real functional spaces with removing the variational of the conjugate operator; the self-consistent adjoint sensitivity is derived, and the phase-dependence problem is avoided for the derived structural topology. Several numerical examples are implemented to demonstrate the robustness of the derived self-consistent adjoint analysis.

Interactions of multi-scale heterogeneity in the lithosphere: Australia

NASA Astrophysics Data System (ADS)

Kennett, B. L. N.; Yoshizawa, K.; Furumura, T.

2017-10-01

Understanding the complex heterogeneity of the continental lithosphere involves a wide variety of spatial scales and the synthesis of multiple classes of information. Seismic surface waves and multiply reflected body waves provide the main constraints on broad-scale structure, and bounds on the extent of the lithosphere-asthenosphere transition (LAT) can be found from the vertical gradients of S wavespeed. Information on finer-scale structures comes through body wave studies, including detailed seismic tomography and P-wave reflectivity extracted from stacked autocorrelograms of continuous component records. With the inclusion of deterministic large-scale structure and realistic medium-scale stochastic features fine-scale variations are subdued. The resulting multi-scale heterogeneity model for the Australian region gives a good representation of the character of observed seismograms and their geographic variations and matches the observations of P-wave reflectivity. P reflections in the 0.5-3.0 Hz band in the uppermost mantle suggest variations on vertical scales of a few hundred metres with amplitudes of the order of 1%. Interference of waves reflected or converted at sequences of such modest variations in physical properties produce relatively simple behaviour for lower frequencies, which can suggest simpler structures than are actually present. Vertical changes in the character of fine-scale heterogeneity can produce apparent discontinuities. In Central Australia a 'mid-lithospheric discontinuity' can be tracked via changes in frequency content of station reflectivity, with links to the broad-scale pattern of wavespeed gradients and, in particular, the gradients of radial anisotropy. Comparisons with xenolith results from southeastern Australia indicate a strong tie between geochemical stratification and P-wave reflectivity.

Bio-soliton model that predicts non-thermal electromagnetic frequency bands, that either stabilize or destabilize living cells.

PubMed

Geesink, J H; Meijer, D K F

2017-01-01

Solitons, as self-reinforcing solitary waves, interact with complex biological phenomena such as cellular self-organization. A soliton model is able to describe a spectrum of electromagnetism modalities that can be applied to understand the physical principles of biological effects in living cells, as caused by endogenous and exogenous electromagnetic fields and is compatible with quantum coherence. A bio-soliton model is proposed, that enables to predict which eigen-frequencies of non-thermal electromagnetic waves are life-sustaining and which are, in contrast, detrimental for living cells. The particular effects are exerted by a range of electromagnetic wave eigen-frequencies of one-tenth of a Hertz till Peta Hertz that show a pattern of 12 bands, and can be positioned on an acoustic reference frequency scale. The model was substantiated by a meta-analysis of 240 published articles of biological electromagnetic experiments, in which a spectrum of non-thermal electromagnetic waves were exposed to living cells and intact organisms. These data support the concept of coherent quantized electromagnetic states in living organisms and the theories of Fröhlich, Davydov and Pang. It is envisioned that a rational control of shape by soliton-waves and related to a morphogenetic field and parametric resonance provides positional information and cues to regulate organism-wide systems properties like anatomy, control of reproduction and repair.

Phase velocity nonuniformity-resulted beam patterns in difference frequency generation.

PubMed

Lu, Daquan; Qian, Liejia; Li, Yongzhong; Yang, Hua; Zhu, Heyuan; Fan, Dianyuan

2007-04-16

The evolution of the difference frequency generation between a planar pump wave and a focused signal wave has been numerically investigated in this paper. We show that, at the difference frequency wave, various beam patterns such as ring and moon-like, are resulted due to the nonuniform distribution of phase velocity in the focused signal wave. The subluminal and superluminal regions can be identified by the intersection of two generated beam profiles that correspond to a pair of phase-mismatches with equal value but opposite signs.

Binary Black Holes and Gravitational Waves

NASA Technical Reports Server (NTRS)

Centrella, Joan

2007-01-01

The final merger of two black holes releases a tremendous amount of energy, more than the combined light from all the stars in the visible universe. This energy is emitted in the form of gravitational waves, and observing these sources with gravitational wave detectors such as LIGO and LISA requires that we know the pattern or fingerprint of the radiation emitted. Since black hole mergers take place in regions of extreme gravitational fields, we need to solve Einstein's equations of general relativity on a computer in order to calculate these wave patterns.

Mode calculations in unstable resonators with flowing saturable gain. 1:hermite-gaussian expansion.

PubMed

Siegman, A E; Sziklas, E A

1974-12-01

We present a procedure for calculating the three-dimensional mode pattern, the output beam characteristics, and the power output of an oscillating high-power laser taking into account a nonuniform, transversely flowing, saturable gain medium; index inhomogeneities inside the laser resonator; and arbitrary mirror distortion and misalignment. The laser is divided into a number of axial segments. The saturated gain-and-index variation. across each short segment is lumped into a complex gain profile across the midplane of that segment. The circulating optical wave within the resonator is propagated from midplane to midplane in free-space fashion and is multiplied by the lumped complex gain profile upon passing through each midplane. After each complete round trip of the optical wave inside the resonator, the saturated gain profiles are recalculated based upon the circulating fields in the cavity. The procedure when applied to typical unstable-resonator flowing-gain lasers shows convergence to a single distorted steady-state mode of oscillation. Typical near-field and far-field results are presented. Several empirical rules of thumb for finite truncated Hermite-Gaussian expansions, including an approximate sampling theorem, have been developed as part of the calculations.

Projecting light beams with 3D waveguide arrays

NASA Astrophysics Data System (ADS)

Crespi, Andrea; Bragheri, Francesca

2017-01-01

Free-space light beams with complex intensity patterns, or non-trivial phase structure, are demanded in diverse fields, ranging from classical and quantum optical communications, to manipulation and imaging of microparticles and cells. Static or dynamic spatial light modulators, acting on the phase or intensity of an incoming light wave, are the conventional choices to produce beams with such non-trivial characteristics. However, interfacing these devices with optical fibers or integrated optical circuits often requires difficult alignment or cumbersome optical setups. Here we explore theoretically and with numerical simulations the potentialities of directly using the output of engineered three-dimensional waveguide arrays, illuminated with linearly polarized light, to project light beams with peculiar structures. We investigate through a collection of illustrative configurations the far field distribution, showing the possibility to achieve orbital angular momentum, or to produce elaborate intensity or phase patterns with several singularity points. We also simulate the propagation of the projected beam, showing the possibility to concentrate light. We note that these devices should be at reach of current technology, thus perspectives are open for the generation of complex free-space optical beams from integrated waveguide circuits.

Analysis of Wave Velocity Patterns in Black Cherry Trees and its Effect on Internal Decay Detection

Treesearch

Guanghui Li; Xiping Wang; Jan Wiedenbeck; Robert J. Ross

2013-01-01

In this study, we examined stress wave velocity patterns in the cross sections of black cherry trees, developed analytical models of stress wave velocity in sound healthy trees, and then tested the effectiveness of the models as a tool for tree decay diagnosis. Acoustic tomography data of the tree cross sections were collected from 12 black cherry trees at a production...

Analysis of wave velocity patterns in black cherry trees and its effect on internal decay detection

Treesearch

Guanghui Li; Xiping Wang; Hailin Feng; Jan Wiedenbeck; Robert J. Ross

2014-01-01

In this study, we examined stress wave velocity patterns in the cross sections of black cherry trees, developed analytical models of stress wave velocity in sound healthy trees, and then tested the effectiveness of the models as a tool for tree decay diagnosis. Acoustic tomography data of the tree cross sections were collected from 12 black cherry trees at a production...

Patterns and drivers of daily bed-level dynamics on two tidal flats with contrasting wave exposure.

PubMed

Hu, Zhan; Yao, Peng; van der Wal, Daphne; Bouma, Tjeerd J

2017-08-02

Short-term bed-level dynamics has been identified as one of the main factors affecting biota establishment or retreat on tidal flats. However, due to a lack of proper instruments and intensive labour involved, the pattern and drivers of daily bed-level dynamics are largely unexplored in a spatiotemporal context. In this study, 12 newly-developed automatic bed-level sensors were deployed for nearly 15 months on two tidal flats with contrasting wave exposure, proving an unique dataset of daily bed-level changes and hydrodynamic forcing. By analysing the data, we show that (1) a general steepening trend exists on both tidal flats, even with contrasting wave exposure and different bed sediment grain size; (2) daily morphodynamics level increases towards the sea; (3) tidal forcing sets the general morphological evolution pattern at both sites; (4) wave forcing induces short-term bed-level fluctuations at the wave-exposed site, but similar effect is not seen at the sheltered site with smaller waves; (5) storms provoke aggravated erosion, but the impact is conditioned by tidal levels. This study provides insights in the pattern and drivers of daily intertidal bed-level dynamics, thereby setting a template for future high-resolution field monitoring programmes and inviting in-depth morphodynamic modelling for improved understanding and predictive capability.

Thermomagnetic convective flows in a vertical layer of ferrocolloid: perturbation energy analysis and experimental study.

PubMed

Suslov, Sergey A; Bozhko, Alexandra A; Sidorov, Alexander S; Putin, Gennady F

2012-07-01

Flow patterns arising in a vertical differentially heated layer of nonconducting ferromagnetic fluid placed in an external uniform transverse magnetic field are studied experimentally and discussed from the point of view of the perturbation energy balance. A quantitative criterion for detecting the parametric point where the dominant role in generating a flow instability is transferred between the thermogravitational and thermomagnetic mechanisms is suggested, based on the disturbance energy balance analysis. A comprehensive experimental study of various flow patterns is undertaken, and the existence is demonstrated of oblique thermomagnetic waves theoretically predicted by Suslov [Phys. Fluids 20, 084101 (2008)] and superposed onto the stationary magnetoconvective pattern known previously. It is found that the wave number of the detected convection patterns depends sensitively on the temperature difference across the layer and on the applied magnetic field. In unsteady regimes its value varies periodically by a factor of almost 2, indicating the appearance of two different competing wave modes. The wave numbers and spatial orientation of the observed dominant flow patterns are found to be in good agreement with theoretical predictions.

On the Shelf Resonances of the Gulf of Carpentaria and the Arafura Sea

NASA Astrophysics Data System (ADS)

Webb, D. J.

2012-02-01

A numerical model is used to investigate the resonances of the Gulf of Carpentaria and the Arafura Sea. The model is forced at the shelf edge, first with physically realistic real values of angular velocity. The response functions at points within the region show maxima and other behaviour which imply that resonances are involved but it is difficult to be more specific. The study is then extended to complex angular velocities and the results then show a clear pattern of gravity wave and Rossby wave like resonances. The properties of the resonances are investigated and used to reinterpret the responses at real values of angular velocity. It is found that in some regions the response is dominated by modes trapped between the shelf edge and the coast or between opposing coastlines. In other regions the resonances show cooperative behaviour, possibly indicating the importance of other physical processes.

Semi-automatic mapping for identifying complex geobodies in seismic images

NASA Astrophysics Data System (ADS)

Domínguez-C, Raymundo; Romero-Salcedo, Manuel; Velasquillo-Martínez, Luis G.; Shemeretov, Leonid

2017-03-01

Seismic images are composed of positive and negative seismic wave traces with different amplitudes (Robein 2010 Seismic Imaging: A Review of the Techniques, their Principles, Merits and Limitations (Houten: EAGE)). The association of these amplitudes together with a color palette forms complex visual patterns. The color intensity of such patterns is directly related to impedance contrasts: the higher the contrast, the higher the color intensity. Generally speaking, low impedance contrasts are depicted with low tone colors, creating zones with different patterns whose features are not evident for a 3D automated mapping option available on commercial software. In this work, a workflow for a semi-automatic mapping of seismic images focused on those areas with low-intensity colored zones that may be associated with geobodies of petroleum interest is proposed. The CIE L*A*B* color space was used to perform the seismic image processing, which helped find small but significant differences between pixel tones. This process generated binary masks that bound color regions to low-intensity colors. The three-dimensional-mask projection allowed the construction of 3D structures for such zones (geobodies). The proposed method was applied to a set of digital images from a seismic cube and tested on four representative study cases. The obtained results are encouraging because interesting geobodies are obtained with a minimum of information.

Typology of nonlinear activity waves in a layered neural continuum.

PubMed

Koch, Paul; Leisman, Gerry

2006-04-01

Neural tissue, a medium containing electro-chemical energy, can amplify small increments in cellular activity. The growing disturbance, measured as the fraction of active cells, manifests as propagating waves. In a layered geometry with a time delay in synaptic signals between the layers, the delay is instrumental in determining the amplified wavelengths. The growth of the waves is limited by the finite number of neural cells in a given region of the continuum. As wave growth saturates, the resulting activity patterns in space and time show a variety of forms, ranging from regular monochromatic waves to highly irregular mixtures of different spatial frequencies. The type of wave configuration is determined by a number of parameters, including alertness and synaptic conditioning as well as delay. For all cases studied, using numerical solution of the nonlinear Wilson-Cowan (1973) equations, there is an interval in delay in which the wave mixing occurs. As delay increases through this interval, during a series of consecutive waves propagating through a continuum region, the activity within that region changes from a single-frequency to a multiple-frequency pattern and back again. The diverse spatio-temporal patterns give a more concrete form to several metaphors advanced over the years to attempt an explanation of cognitive phenomena: Activity waves embody the "holographic memory" (Pribram, 1991); wave mixing provides a plausible cause of the competition called "neural Darwinism" (Edelman, 1988); finally the consecutive generation of growing neural waves can explain the discontinuousness of "psychological time" (Stroud, 1955).

4Pi microscopy of the nuclear pore complex.

PubMed

Kahms, Martin; Hüve, Jana; Peters, Reiner

2015-01-01

4Pi microscopy is a far-field fluorescence microscopy technique, in which the wave fronts of two opposing illuminating beams are adjusted to constructively interfere in a common focus. This yields a diffraction pattern in the direction of the optical axis, which essentially consists of a main focal spot accompanied by two smaller side lobes. At optimal conditions, the main peak of this so-called point spread function has a full width at half maximum: fixed phrase of 100 nm in the direction of the optical axis, and thus is 6-7-fold smaller than that of a confocal microscope. In this chapter, we describe the basic features of 4Pi microscopy and its application to cell biology using the example of the nuclear pore complex, a large protein assembly spanning the nuclear envelope.

Shape Mode Analysis Exposes Movement Patterns in Biology: Flagella and Flatworms as Case Studies

PubMed Central

Werner, Steffen; Rink, Jochen C.; Riedel-Kruse, Ingmar H.; Friedrich, Benjamin M.

2014-01-01

We illustrate shape mode analysis as a simple, yet powerful technique to concisely describe complex biological shapes and their dynamics. We characterize undulatory bending waves of beating flagella and reconstruct a limit cycle of flagellar oscillations, paying particular attention to the periodicity of angular data. As a second example, we analyze non-convex boundary outlines of gliding flatworms, which allows us to expose stereotypic body postures that can be related to two different locomotion mechanisms. Further, shape mode analysis based on principal component analysis allows to discriminate different flatworm species, despite large motion-associated shape variability. Thus, complex shape dynamics is characterized by a small number of shape scores that change in time. We present this method using descriptive examples, explaining abstract mathematics in a graphic way. PMID:25426857

Patterns in the Waves

NASA Astrophysics Data System (ADS)

Coco, G.; Guza, R. T.; Garnier, R.; Lomonaco, P.; Lopez De San Roman Blanco, B.; Dalrymple, R. A.; Xu, M.

2014-12-01

Edge waves, gravity waves trapped close to the shoreline by refraction, can in some cases form a standing wave pattern with alongshore periodic sequence of high and low runup. Nonlinear mechanisms for generation of edge waves by monochromatic waves incident on a planar beach from deep water have been elaborated theoretically and in the lab. Edge waves have been long considered a potential source for alongshore periodic morphological patterns in the swash (e.g., beach cusps), and edge-wave based predictions of cusp spacing compare qualitatively well with many field observations. We will discuss the extension of lab observations and numerical modeling to include incident waves with significant frequency and directional bandwidth. Laboratory experiments were performed at the Cantabria Coastal and Ocean Basin. The large rectangular basin (25 m cross-shore by 32 m alongshore) was heavily instrumented, had reflective sidewalls, and a steep concrete beach (slope 1:5) with a constant depth (1m) section between the wavemaker and beach. With monochromatic, normally incident waves we observed the expected, previously described subharmonic observations. Edge wave vertical heights at the shoreline reached 80cm, and edge wave uprushes exceeded the sloping beach freeboard. When frequency and frequency-directional spread are increased, the excited edge wave character changes substantially. In some cases, subharmonic excitation is suppressed completely. In other cases, edge waves are excited intermittently and unpredictably. The spatially and temporally steady forcing required for strong, persistent subharmonic instability is lacking with even modestly spread (direction and frequency) incident waves. An SPH numerical model is capable of reproducing aspects of the observations. It seems unlikely to us that subhamonic edge waves alone are responsible for most cusp formation on natural beaches. The steady incident wave forcing needed to initiate subharmonic growth, and to maintain subharmonics long enough to build cups, are abundantly present with an incident plane wave, but lacking in many natural settings. Although subharmonic edge waves can potentially start the initial spacing, positive feedback between flow and morphology are likely critical to cusp growth.

Identification of Saturn-driven bending waves in Saturn's inner C ring

NASA Astrophysics Data System (ADS)

French, Richard; Colwell, Joshua; Nicholson, Phillip; Marouf, Essam; McGhee-French, Colleen; Hedman, Matthew

2016-07-01

Saturn's C ring is host to more than a dozen wavelike features whose detailed nature has been a mystery since their discovery in high-resolution Voyager radio occultations of the rings. Rosen et al. (1991 Icarus 93, 25) enumerated several of these, and the list was augmented by Baillié et al. (2011 Icarus 216, 292), based on a detailed analysis of Cassini UVIS stellar occultation profiles. Recently, Hedman and Nicholson (2013 Astron. J. 146, 12; 2014 MNRAS 444, 1369) were able to identify the wavenumbers and pattern speeds for several of the waves. They showed that several Outer Lindblad Resonances (OLR) density waves had properties that were in general quite consistent with the predictions of Marley and Porco (1993 Icarus, 106, 508) and Marley (2014 Icarus, 234, 194) that Saturn's acoustic oscillations had pattern speeds with corresponding resonance radii in the C ring. Hedman and Nicholson also identified a set of Inner Lindblad Resonance density waves with pattern speeds very close to Saturn's rotation period. Finally, French et al. (2016 Icarus, in press) identified an inward-propagating m=2 wave in the Maxwell Ringlet. These new identifications ushered in the field of Kronoseismology -- the probing of the nature of Saturn's interior from the analysis of Saturn-driven waves in the rings. Here, we report the identification of six additional wave features, all in the inner C ring, from Cassini occultation measurements. Two of the waves are OLRs: Baillié feature #5 (B1 = W76.022 (i.e., r=76022 km)) with wavenumber m=-9, and Baillié #9 (B9 = W76.435) with m=-2. The first of these is presumably Saturn-driven, but of unknown origin; W76.435 fits very nicely in the pattern predicted by Marley (2014) for an m=l-2, q=2 internal oscillation. We also report the identification of a new class of Saturn-driven waves: B1 (W74.666), B3 (W74.936), B4 (W74.941), and B6 (W76.234) are all bending waves at Outer Vertical Resonances (OVR) with wavenumbers between m=-4 and m=-9. Marley and Porco (1993) and Marley (2014) predicted the pattern speeds of first- and second-order acoustic modes that might produce bending waves, and these results confirm this expectation. The wavelengths of these waves are quite short - on the order of 1 km for the longest wavecrest - and the alignment of individual occultation wave profiles sorted by the phase of the wave is highly dependent on an extremely accurate (200 m) absolute radius scale for the rings, made possible by orbit fits to over 15,000 individual ring and gap edge measurements from Cassini occultation data. Collectively, the amplitudes, wavenumbers, and pattern speeds of these waves can be used to refine our understanding of Saturn's internal structure (Fuller et al. 2014 Icarus 231, 34). ~

Patterns of sediment dispersion coastwise the State of Bahia - Brazil.

PubMed

Bittencourt; Dominguez; Martin; Silva

2000-06-01

Using the average directions of the main wave-fronts which approach the coast of Bahia State - coinciding with that of the main wind occurring in the area - and of their periods, we define a wave climate model based on the construction of refraction diagrams. The resulting model of sediment transport was able to reproduce, in a general way, the sediment dispersion patterns furnished by geomorphic indicators of the littoral drift. These dispersion patterns control the generation of different types of sediment accumulations and of coastal stretches under erosion. We demonstrate that the presence of the Abrolhos and Corumbaú Point coral reefs is an important factor controlling the sediment dispersion patterns, since them act as a large protection against the waves action.

Modeling long period swell in Southern California: Practical boundary conditions from buoy observations and global wave model predictions

NASA Astrophysics Data System (ADS)

Crosby, S. C.; O'Reilly, W. C.; Guza, R. T.

2016-02-01

Accurate, unbiased, high-resolution (in space and time) nearshore wave predictions are needed to drive models of beach erosion, coastal flooding, and alongshore transport of sediment, biota and pollutants. On highly sheltered shorelines, wave predictions are sensitive to the directions of onshore propagating waves, and nearshore model prediction error is often dominated by uncertainty in offshore boundary conditions. Offshore islands and shoals, and coastline curvature, create complex sheltering patterns over the 250km span of southern California (SC) shoreline. Here, regional wave model skill in SC was compared for different offshore boundary conditions created using offshore buoy observations and global wave model hindcasts (National Oceanographic and Atmospheric Administration Wave Watch 3, WW3). Spectral ray-tracing methods were used to transform incident offshore swell (0.04-0.09Hz) energy at high directional resolution (1-deg). Model skill is assessed for predictions (wave height, direction, and alongshore radiation stress) at 16 nearshore buoy sites between 2000 and 2009. Model skill using buoy-derived boundary conditions is higher than with WW3-derived boundary conditions. Buoy-driven nearshore model results are similar with various assumptions about the true offshore directional distribution (maximum entropy, Bayesian direct, and 2nd derivative smoothness). Two methods combining offshore buoy observations with WW3 predictions in the offshore boundary condition did not improve nearshore skill above buoy-only methods. A case example at Oceanside harbor shows strong sensitivity of alongshore sediment transport predictions to different offshore boundary conditions. Despite this uncertainty in alongshore transport magnitude, alongshore gradients in transport (e.g. the location of model accretion and erosion zones) are determined by the local bathymetry, and are similar for all predictions.

Helicon modes in uniform plasmas. III. Angular momentum

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stenzel, R. L.; Urrutia, J. M.

Helicons are electromagnetic waves with helical phase fronts propagating in the whistler mode in magnetized plasmas and solids. They have similar properties to electromagnetic waves with angular momentum in free space. Helicons are circularly polarized waves carrying spin angular momentum and orbital angular momentum due to their propagation around the ambient magnetic field B{sub 0}. These properties have not been considered in the community of researchers working on helicon plasma sources, but are the topic of the present work. The present work focuses on the field topology of helicons in unbounded plasmas, not on helicon source physics. Helicons are excitedmore » in a large uniform laboratory plasma with a magnetic loop antenna whose dipole axis is aligned along or across B{sub 0}. The wave fields are measured in orthogonal planes and extended to three dimensions (3D) by interpolation. Since density and B{sub 0} are uniform, small amplitude waves from loops at different locations can be superimposed to generate complex antenna patterns. With a circular array of phase shifted loops, whistler modes with angular and axial wave propagation, i.e., helicons, are generated. Without boundaries radial propagation also arises. The azimuthal mode number m can be positive or negative while the field polarization remains right-hand circular. The conservation of energy and momentum implies that these field quantities are transferred to matter which causes damping or reflection. Wave-particle interactions with fast electrons are possible by Doppler shifted resonances. The transverse Doppler shift is demonstrated. Wave-wave interactions are also shown by showing collisions between different helicons. Whistler turbulence does not always have to be created by nonlinear wave-interactions but can also be a linear superposition of waves from random sources. In helicon collisions, the linear and/or orbital angular momenta can be canceled, which results in a great variety of field topologies. The work will be contrasted to the research on helicon plasma sources.« less

Dispersion features of complex waves in a graphene-coated semiconductor nanowire

NASA Astrophysics Data System (ADS)

Yu, Pengchao; Fesenko, Volodymyr I.; Tuz, Vladimir R.

2018-05-01

The dispersion features of a graphene-coated semiconductor nanowire operating in the terahertz frequency band are consistently studied in the framework of a special theory of complex waves. Detailed classification of the waveguide modes was carried out based on the analysis of characteristics of the phase and attenuation constants obtained from the complex roots of characteristic equation. With such a treatment, the waves are attributed to the group of either "proper" or "improper" waves, wherein their type is determined as the trapped surface waves, fast and slow leaky waves, and surface plasmons. The dispersion curves of axially symmetric TM0n and TE0n modes, as well as nonsymmetric hybrid EH1n and HE1n modes, were plotted and analyzed in detail, and both radiative regime of leaky waves and guided regime of trapped surface waves are identified. The peculiarities of propagation of the TM modes of surface plasmons were revealed. Two subregions of existence of surface plasmons were found out where they appear as propagating and reactive waves. The cutoff conditions for higher-order TM modes of surface plasmons were correctly determined.

Intracochlear pressure measurements in scala media inform models of cochlear mechanics

NASA Astrophysics Data System (ADS)

Kale, Sushrut; Olson, Elizabeth S.

2015-12-01

In the classic view of cochlear mechanics, the cochlea is comprised of two identical fluid chambers separated by the cochlear partition (CP). In this view the traveling wave pressures in the two chambers mirror each other; they are equal in magnitude and opposite in phase. A fast pressure mode adds approximately uniformly. More recent models of cochlear mechanics take into account the structural complexity of the CP and the resulting additional mechanical modes would lead to distinct (non-symmetric) patterns of pressure and motion on the two sides of the CP. However, there was little to no physiological data that explored these predictions. To this aim, we measured intracochlear fluid pressure in scala media (SM), including measurements close to the sensory tissue, using miniaturized pressure sensors (˜ 80 μm outer diameter). Measurements were made in-vivo from the basal cochlear turn in gerbils. SM pressure was measured at two longitudinal locations in different preparations. In a subset of the experiments SM and ST (scala tympani) pressures were measured at the same longitudinal location. Traveling wave pressures were observed in both SM and ST, and showed the relative phase predicted by the classical theory. In addition, SM pressure showed spatial variations that had not been observed in ST, which points to a relatively complex CP motion on the SM side. These data both underscore the first-order validity of the classic cochlear traveling wave model, and open a new view to CP mechanics.

AIC-based diffraction stacking for local earthquake locations at the Sumatran Fault (Indonesia)

NASA Astrophysics Data System (ADS)

Hendriyana, Andri; Bauer, Klaus; Muksin, Umar; Weber, Michael

2018-05-01

We present a new workflow for the localization of seismic events which is based on a diffraction stacking approach. In order to address the effects from complex source radiation patterns, we suggest to compute diffraction stacking from a characteristic function (CF) instead of stacking the original waveform data. A new CF, which is called in the following mAIC (modified from Akaike Information Criterion) is proposed. We demonstrate that both P- and S-wave onsets can be detected accurately. To avoid cross-talk between P and S waves due to inaccurate velocity models, we separate the P and S waves from the mAIC function by making use of polarization attributes. Then, the final image function is represented by the largest eigenvalue as a result of the covariance analysis between P- and S-image functions. Results from synthetic experiments show that the proposed diffraction stacking provides reliable results. The workflow of the diffraction stacking method was finally applied to local earthquake data from Sumatra, Indonesia. Recordings from a temporary network of 42 stations deployed for nine months around the Tarutung pull-apart basin were analysed. The seismic event locations resulting from the diffraction stacking method align along a segment of the Sumatran Fault. A more complex distribution of seismicity is imaged within and around the Tarutung basin. Two lineaments striking N-S were found in the centre of the Tarutung basin which support independent results from structural geology.

Validation and Performance Comparison of Numerical Codes for Tsunami Inundation

NASA Astrophysics Data System (ADS)

Velioglu, D.; Kian, R.; Yalciner, A. C.; Zaytsev, A.

2015-12-01

In inundation zones, tsunami motion turns from wave motion to flow of water. Modelling of this phenomenon is a complex problem since there are many parameters affecting the tsunami flow. In this respect, the performance of numerical codes that analyze tsunami inundation patterns becomes important. The computation of water surface elevation is not sufficient for proper analysis of tsunami behaviour in shallow water zones and on land and hence for the development of mitigation strategies. Velocity and velocity patterns are also crucial parameters and have to be computed at the highest accuracy. There are numerous numerical codes to be used for simulating tsunami inundation. In this study, FLOW 3D and NAMI DANCE codes are selected for validation and performance comparison. Flow 3D simulates linear and nonlinear propagating surface waves as well as long waves by solving three-dimensional Navier-Stokes (3D-NS) equations. FLOW 3D is used specificaly for flood problems. NAMI DANCE uses finite difference computational method to solve linear and nonlinear forms of shallow water equations (NSWE) in long wave problems, specifically tsunamis. In this study, these codes are validated and their performances are compared using two benchmark problems which are discussed in 2015 National Tsunami Hazard Mitigation Program (NTHMP) Annual meeting in Portland, USA. One of the problems is an experiment of a single long-period wave propagating up a piecewise linear slope and onto a small-scale model of the town of Seaside, Oregon. Other benchmark problem is an experiment of a single solitary wave propagating up a triangular shaped shelf with an island feature located at the offshore point of the shelf. The computed water surface elevation and velocity data are compared with the measured data. The comparisons showed that both codes are in fairly good agreement with each other and benchmark data. All results are presented with discussions and comparisons. The research leading to these results has received funding from the European Union's Seventh Framework Programme (FP7/2007-2013) under grant agreement No 603839 (Project ASTARTE - Assessment, Strategy and Risk Reduction for Tsunamis in Europe)

Comparison of velocity and temperature time series data analysis in experiments on the thermally driven rotating annulus

NASA Astrophysics Data System (ADS)

von Larcher, Thomas; Harlander, Uwe; Alexandrov, Kiril; Wang, Yongtai

2010-05-01

The model of the differentially heated, rotating cylindrical gap filled with a fluid is since more than four decades extensively used for laboratory experiments of baroclinic wave interactions, and a number of data acquisition techniques are applied e.g. to unhide regular waves of different zonal wave number, to better understand the transition to the quasi-chaotic regime, and to reveal the underlying dynamical processes of complex wave flows. In our experiments presented here, we make use of non-intrusive measurement techniques of a quite different nature. While the high accurate Laser-Doppler-Velocimetry (LDV ) is used for measurements of the radial velocity component at equidistant azimuthal positions, a high sensitive thermographic camera, which resolution allows for resolving fine scale structures, measures the surface temperature field. Both sets of time series data are analyzed by using multivariate statistical techniques. While the LDV data sets are studied by applying the Multi-Channel Singular Spectrum Analysis (M - SSA), the temperature data sets are analyzed by applying the Empirical Orthogonal Functions (EOF ). In addition, the temperature data are processed in a way to become comparable to the LDV data, i.e. reducing the size of the data set in such a manner that the temperature measurements would imaginary be performed at equidistant azimuthal positions only. This approach initially results in a great loss of information. But applying the M - SSA to the reduced temperature data sets enable us not only to compare the data analysis methods but also to reclassify the results yielded with the LDV data analysis. The measurements are performed at particular parameter points, where our former studies show that kinds of complex wave patterns occur [1, 2]. For example, we found a dominant and a weak mode in the 3-4 wave transition region. This finding confirms earlier ideas on wave dispersion in transition regions between regular waves. Increasing the annulus' rotation leads to a growth of the weak mode until this mode becomes the dominant one. [1] Th. von Larcher and C. Egbers, Experiments on transitions of baroclinic waves in a differentially heated rotating annulus, Nonlinear Processes in Geophysics, 2005, 12, 1033-1041, NPG Print: ISSN 1023-5809, NPG Online: ISSN 1607-7946 [2] U. Harlander, Th. von Larcher, Y. Wang and C. Egbers, PIV- and LDV-measurements of baroclinic wave interactions in a thermally driven rotating annulus, Experiments in Fluids, 2009, DOI: 10.1007/s00348-009-0792-5

WAVE2 Regulates Epithelial Morphology and Cadherin Isoform Switching through Regulation of Twist and Abl

PubMed Central

Bryce, Nicole S.; Reynolds, Albert B.; Koleske, Anthony J.; Weaver, Alissa M.

2013-01-01

Background Epithelial morphogenesis is a dynamic process that involves coordination of signaling and actin cytoskeletal rearrangements. Principal Findings We analyzed the contribution of the branched actin regulator WAVE2 in the development of 3-dimensional (3D) epithelial structures. WAVE2-knockdown (WAVE2-KD) cells formed large multi-lobular acini that continued to proliferate at an abnormally late stage compared to control acini. Immunostaining of the cell-cell junctions of WAVE2-KD acini revealed weak and heterogeneous E-cadherin staining despite little change in actin filament localization to the same junctions. Analysis of cadherin expression demonstrated a decrease in E-cadherin and an increase in N-cadherin protein and mRNA abundance in total cell lysates. In addition, WAVE2-KD cells exhibited an increase in the mRNA levels of the epithelial-mesenchymal transition (EMT)-associated transcription factor Twist1. KD of Twist1 expression in WAVE2-KD cells reversed the cadherin switching and completely rescued the aberrant 3D morphological phenotype. Activity of the WAVE2 complex binding partner Abl kinase was also increased in WAVE2-KD cells, as assessed by tyrosine phosphorylation of the Abl substrate CrkL. Inhibition of Abl with STI571 rescued the multi-lobular WAVE2-KD 3D phenotype whereas overexpression of Abl kinase phenocopied the WAVE2-KD phenotype. Conclusions The WAVE2 complex regulates breast epithelial morphology by a complex mechanism involving repression of Twist1 expression and Abl kinase activity. These data reveal a critical role for WAVE2 complex in regulation of cellular signaling and epithelial morphogenesis. PMID:23691243

Mucosal wave characteristics in three voice modes (fry, hiss & overpressure) produced by a female speaker: a preliminary study using stroboscopy, HSDI and analyzed by kymography, P-FFT & Nyquist plots

NASA Astrophysics Data System (ADS)

Izdebski, Krzysztof; Ward, Ronald R.; Yan, Yuling

2012-02-01

HSDI provides a whole new way to investigate visually intra-laryngeal behavior and posturing during phonation by providing detailed real-time information about laryngeal biomechanics that include observations about mucosal wave, wave motion directionality, glottic area wave form, asymmetry of vibrations within and across vocal folds and contact area of the glottis including posterior commissure closure. These observations are fundamental to our understanding and modeling of both normal and disordered phonation. In this preliminary report we focus on direct HSDI in vivo observations of not only the glottic region, but also on the entire supraglottic laryngeal posturing during fry, breathy/hiss and over-pressured phonation modes produced in a non-pathological settings. Analysis included spatio-temporal vibration patterns of vocal folds, multi-line kymograms, spectral PFFT analysis, and Nyquist spatio-temporal plots. The presented examples reveal that supraglottic contraction assists in prolonged closed phase of the vibratory cycle, and that prolonged closed phase is longest in fry and overpressure and shortest albeit complex in hiss. Hiss also allows for vocal fold vibration despite glottis separation. These findings need to be compared to pathologic phonation representing the three voice modes to derive at better differential diagnosis.

Interferometric synthetic aperture radar: Building tomorrow's tools today

USGS Publications Warehouse

Lu, Zhong

2006-01-01

A synthetic aperture radar (SAR) system transmits electromagnetic (EM) waves at a wavelength that can range from a few millimeters to tens of centimeters. The radar wave propagates through the atmosphere and interacts with the Earth’s surface. Part of the energy is reflected back to the SAR system and recorded. Using a sophisticated image processing technique, called SAR processing (Curlander and McDonough, 1991), both the intensity and phase of the reflected (or backscattered) signal of each ground resolution element (a few meters to tens of meters) can be calculated in the form of a complex-valued SAR image representing the reflectivity of the ground surface. The amplitude or intensity of the SAR image is determined primarily by terrain slope, surface roughness, and dielectric constants, whereas the phase of the SAR image is determined primarily by the distance between the satellite antenna and the ground targets, slowing of the signal by the atmosphere, and the interaction of EM waves with ground surface. Interferometric SAR (InSAR) imaging, a recently developed remote sensing technique, utilizes the interaction of EM waves, referred to as interference, to measure precise distances. Very simply, InSAR involves the use of two or more SAR images of the same area to extract landscape topography and its deformation patterns.

Deep structure of the Alborz Mountains by joint inversion of P receiver functions and dispersion curves

NASA Astrophysics Data System (ADS)

Rastgoo, Mehdi; Rahimi, Habib; Motaghi, Khalil; Shabanian, Esmaeil; Romanelli, Fabio; Panza, Giuliano F.

2018-04-01

The Alborz Mountains represent a tectonically and seismically active convergent boundary in the Arabia - Eurasia collision zone, in western Asia. The orogenic belt has undergone a long-lasted tectono-magmatic history since the Cretaceous. The relationship between shallow and deep structures in this complex tectonic domain is not straightforward. We present a 2D velocity model constructed by the assemblage of 1D shear wave velocity (Vs) models from 26 seismic stations, mainly distributed along the southern flank of the Alborz Mountains. The shear wave velocity structure has been estimated beneath each station using joint inversion of P-waves receiver functions and Rayleigh wave dispersion curves. A substantiation of the Vs inversion results sits on the modeling of Bouguer gravity anomaly data. Our velocity and density models show low velocity/density anomalies in uppermost mantle of western and central Alborz at a depth range of ∼50-100 km. In deeper parts of the uppermost mantle (depth range of 100-150 km), a high velocity/density anomaly is located beneath most of the Mountain range. The spatial pattern of these low and high velocity/density structures in the upper mantle is interpreted as the result of post collisional delamination of lower part of the western and central Alborz lithosphere.

Magnetic swirls and associated fast magnetoacoustic kink waves in a solar chromospheric flux tube

NASA Astrophysics Data System (ADS)

Murawski, K.; Kayshap, P.; Srivastava, A. K.; Pascoe, D. J.; Jelínek, P.; Kuźma, B.; Fedun, V.

2018-02-01

We perform numerical simulations of impulsively generated magnetic swirls in an isolated flux tube that is rooted in the solar photosphere. These swirls are triggered by an initial pulse in a horizontal component of the velocity. The initial pulse is launched either (a) centrally, within the localized magnetic flux tube or (b) off-central, in the ambient medium. The evolution and dynamics of the flux tube are described by three-dimensional, ideal magnetohydrodynamic equations. These equations are numerically solved to reveal that in case (a) dipole-like swirls associated with the fast magnetoacoustic kink and m = 1 Alfvén waves are generated. In case (b), the fast magnetoacoustic kink and m = 0 Alfvén modes are excited. In both these cases, the excited fast magnetoacoustic kink and Alfvén waves consist of a similar flow pattern and magnetic shells are also generated with clockwise and counter-clockwise rotating plasma within them, which can be the proxy of dipole-shaped chromospheric swirls. The complex dynamics of vortices and wave perturbations reveals the channelling of sufficient amount of energy to fulfil energy losses in the chromosphere (˜104 W m-1) and in the corona (˜102 W m-1). Some of these numerical findings are reminiscent of signatures in recent observational data.

An intelligent signal processing and pattern recognition technique for defect identification using an active sensor network

NASA Astrophysics Data System (ADS)

Su, Zhongqing; Ye, Lin

2004-08-01

The practical utilization of elastic waves, e.g. Rayleigh-Lamb waves, in high-performance structural health monitoring techniques is somewhat impeded due to the complicated wave dispersion phenomena, the existence of multiple wave modes, the high susceptibility to diverse interferences, the bulky sampled data and the difficulty in signal interpretation. An intelligent signal processing and pattern recognition (ISPPR) approach using the wavelet transform and artificial neural network algorithms was developed; this was actualized in a signal processing package (SPP). The ISPPR technique comprehensively functions as signal filtration, data compression, characteristic extraction, information mapping and pattern recognition, capable of extracting essential yet concise features from acquired raw wave signals and further assisting in structural health evaluation. For validation, the SPP was applied to the prediction of crack growth in an alloy structural beam and construction of a damage parameter database for defect identification in CF/EP composite structures. It was clearly apparent that the elastic wave propagation-based damage assessment could be dramatically streamlined by introduction of the ISPPR technique.

Notch-mediated lateral inhibition regulates proneural wave propagation when combined with EGF-mediated reaction diffusion

PubMed Central

Sato, Makoto; Yasugi, Tetsuo; Minami, Yoshiaki; Miura, Takashi; Nagayama, Masaharu

2016-01-01

Notch-mediated lateral inhibition regulates binary cell fate choice, resulting in salt and pepper patterns during various developmental processes. However, how Notch signaling behaves in combination with other signaling systems remains elusive. The wave of differentiation in the Drosophila visual center or “proneural wave” accompanies Notch activity that is propagated without the formation of a salt and pepper pattern, implying that Notch does not form a feedback loop of lateral inhibition during this process. However, mathematical modeling and genetic analysis clearly showed that Notch-mediated lateral inhibition is implemented within the proneural wave. Because partial reduction in EGF signaling causes the formation of the salt and pepper pattern, it is most likely that EGF diffusion cancels salt and pepper pattern formation in silico and in vivo. Moreover, the combination of Notch-mediated lateral inhibition and EGF-mediated reaction diffusion enables a function of Notch signaling that regulates propagation of the wave of differentiation. PMID:27535937

A feasibility study of the use of bounded beams resembling the shape of evanescent and inhomogeneous waves.

PubMed

Declercq, Nico F; Leroy, Oswald

2011-08-01

Plane waves are solutions of the visco-elastic wave equation. Their wave vector can be real for homogeneous plane waves or complex for inhomogeneous and evanescent plane waves. Although interesting from a theoretical point of view, complex wave vectors normally only emerge naturally when propagation or scattering is studied of sound under the appearance of damping effects. Because of the particular behavior of inhomogeneous and evanescent waves and their estimated efficiency for surface wave generation, bounded beams, experimentally mimicking their infinite counterparts similar to (wide) Gaussian beams imitating infinite harmonic plane waves, are of special interest in this report. The study describes the behavior of bounded inhomogeneous and bounded evanescent waves in terms of amplitude and phase distribution as well as energy flow direction. The outcome is of importance to the applicability of bounded inhomogeneous ultrasonic waves for nondestructive testing. Copyright © 2011. Published by Elsevier B.V.

Performance of a process-based hydrodynamic model in predicting shoreline change

NASA Astrophysics Data System (ADS)

Safak, I.; Warner, J. C.; List, J. H.

2012-12-01

Shoreline change is controlled by a complex combination of processes that include waves, currents, sediment characteristics and availability, geologic framework, human interventions, and sea level rise. A comprehensive data set of shoreline position (14 shorelines between 1978-2002) along the continuous and relatively non-interrupted North Carolina Coast from Oregon Inlet to Cape Hatteras (65 km) reveals a spatial pattern of alternating erosion and accretion, with an erosional average shoreline change rate of -1.6 m/yr and up to -8 m/yr in some locations. This data set gives a unique opportunity to study long-term shoreline change in an area hit by frequent storm events while relatively uninfluenced by human interventions and the effects of tidal inlets. Accurate predictions of long-term shoreline change may require a model that accurately resolves surf zone processes and sediment transport patterns. Conventional methods for predicting shoreline change such as one-line models and regression of shoreline positions have been designed for computational efficiency. These methods, however, not only have several underlying restrictions (validity for small angle of wave approach, assuming bottom contours and shoreline to be parallel, depth of closure, etc.) but also their empirical estimates of sediment transport rates in the surf zone have been shown to vary greatly from the calculations of process-based hydrodynamic models. We focus on hind-casting long-term shoreline change using components of the process-based, three-dimensional coupled-ocean-atmosphere-wave-sediment transport modeling system (COAWST). COAWST is forced with historical predictions of atmospheric and oceanographic data from public-domain global models. Through a method of coupled concurrent grid-refinement approach in COAWST, the finest grid with resolution of O(10 m) that covers the surf zone along the section of interest is forced at its spatial boundaries with waves and currents computed on the grids that cover the U.S. East Coast with resolutions as low as O(1 km). The computed patterns of the gradients of surf-zone integrated longshore sediment transport rates are compared with the observed shoreline change.

WAVE2 is regulated by multiple phosphorylation events within its VCA domain

PubMed Central

Pocha, Shirin M; Cory, Giles O

2009-01-01

The (Wiskott-Aldrich Syndrome Protein)-family verprolin homologous protein (WAVE) family of proteins occupies a pivotal position in the cell, converting extracellular signals into the formation of branched filamentous (F) actin structures. WAVE proteins contain a verprolin central acidic (VCA) domain at their C-terminus, responsible for binding to and activating the Arp2/3 complex, which in-turn nucleates the formation of new actin filaments. Here we identify five Casein Kinase 2 (CK2) phosphorylation sites within the VCA domain of WAVE2, serines 482, 484, 488, 489, and 497. Phosphorylation of these sites is required for a high affinity interaction with the Arp2/3 complex. Phosphorylation of ser 482 and 484 specifically inhibits the activation of the Arp2/3 complex by the WAVE2 VCA domain, but has no effect on the affinity for the Arp2/3 complex when the other phosphorylation sites are occupied. We demonstrate phosphorylation of all five sites on endogenous WAVE2 and show that their mutation to non-phosphorylatable alanine residues inhibits WAVE2 function in vivo, inhibiting cell ruffling and disrupting the integrity of the leading edge of migrating cells. Cell Motil. Cytoskeleton 2008. © 2008 Wiley-Liss, Inc. PMID:19012317

The WAVE2 complex regulates T cell receptor signaling to integrins via Abl- and CrkL-C3G-mediated activation of Rap1.

PubMed

Nolz, Jeffrey C; Nacusi, Lucas P; Segovis, Colin M; Medeiros, Ricardo B; Mitchell, Jason S; Shimizu, Yoji; Billadeau, Daniel D

2008-09-22

WAVE2 regulates T cell receptor (TCR)-stimulated actin cytoskeletal dynamics leading to both integrin clustering and affinity maturation. Although WAVE2 mediates integrin affinity maturation by recruiting vinculin and talin to the immunological synapse in an Arp2/3-dependent manner, the mechanism by which it regulates integrin clustering is unclear. We show that the Abl tyrosine kinase associates with the WAVE2 complex and TCR ligation induces WAVE2-dependent membrane recruitment of Abl. Furthermore, we show that WAVE2 regulates TCR-mediated activation of the integrin regulatory guanosine triphosphatase Rap1 via the recruitment and activation of the CrkL-C3G exchange complex. Moreover, we demonstrate that although Abl does not regulate the recruitment of CrkL-C3G into the membrane, it does affect the tyrosine phosphorylation of C3G, which is required for its guanine nucleotide exchange factor activity toward Rap1. This signaling node regulates not only TCR-stimulated integrin clustering but also affinity maturation. These findings identify a previously unknown mechanism by which the WAVE2 complex regulates TCR signaling to Rap1 and integrin activation.

WAVE2 is regulated by multiple phosphorylation events within its VCA domain.

PubMed

Pocha, Shirin M; Cory, Giles O

2009-01-01

The (Wiskott-Aldrich Syndrome Protein)-family verprolin homologous protein (WAVE) family of proteins occupies a pivotal position in the cell, converting extracellular signals into the formation of branched filamentous (F) actin structures. WAVE proteins contain a verprolin central acidic (VCA) domain at their C-terminus, responsible for binding to and activating the Arp2/3 complex, which in-turn nucleates the formation of new actin filaments. Here we identify five Casein Kinase 2 (CK2) phosphorylation sites within the VCA domain of WAVE2, serines 482, 484, 488, 489, and 497. Phosphorylation of these sites is required for a high affinity interaction with the Arp2/3 complex. Phosphorylation of ser 482 and 484 specifically inhibits the activation of the Arp2/3 complex by the WAVE2 VCA domain, but has no effect on the affinity for the Arp2/3 complex when the other phosphorylation sites are occupied. We demonstrate phosphorylation of all five sites on endogenous WAVE2 and show that their mutation to non-phosphorylatable alanine residues inhibits WAVE2 function in vivo, inhibiting cell ruffling and disrupting the integrity of the leading edge of migrating cells. (c) 2008 Wiley-Liss, Inc.

The WAVE2 complex regulates T cell receptor signaling to integrins via Abl- and CrkL–C3G-mediated activation of Rap1

PubMed Central

Nolz, Jeffrey C.; Nacusi, Lucas P.; Segovis, Colin M.; Medeiros, Ricardo B.; Mitchell, Jason S.; Shimizu, Yoji; Billadeau, Daniel D.

2008-01-01

WAVE2 regulates T cell receptor (TCR)–stimulated actin cytoskeletal dynamics leading to both integrin clustering and affinity maturation. Although WAVE2 mediates integrin affinity maturation by recruiting vinculin and talin to the immunological synapse in an Arp2/3-dependent manner, the mechanism by which it regulates integrin clustering is unclear. We show that the Abl tyrosine kinase associates with the WAVE2 complex and TCR ligation induces WAVE2-dependent membrane recruitment of Abl. Furthermore, we show that WAVE2 regulates TCR-mediated activation of the integrin regulatory guanosine triphosphatase Rap1 via the recruitment and activation of the CrkL–C3G exchange complex. Moreover, we demonstrate that although Abl does not regulate the recruitment of CrkL–C3G into the membrane, it does affect the tyrosine phosphorylation of C3G, which is required for its guanine nucleotide exchange factor activity toward Rap1. This signaling node regulates not only TCR-stimulated integrin clustering but also affinity maturation. These findings identify a previously unknown mechanism by which the WAVE2 complex regulates TCR signaling to Rap1 and integrin activation. PMID:18809728

Theory of spiral structure.

NASA Technical Reports Server (NTRS)

Lin, C. C.

1971-01-01

The question whether the galactic spiral arms are material objects or wave patterns is discussed. A semiempirical approach is adopted in presenting the concept of density waves. The theory of density waves is considered, giving attention to a survey of theoretical developments by analytical methods, the implication of a spiral pattern of density waves, spirals with moderately small pitch angle, and the origin and permanence of galactic spirals. The theoretical aspects discussed are tested against more detailed observations in the Milky Way system. It is pointed out that the density wave concept introduced by Lindblad, including the material concentration of both gas and stars, is the essential basis for the spiral structure of disk-shaped galaxies.

Research Update: Focused ion beam direct writing of magnetic patterns with controlled structural and magnetic properties

NASA Astrophysics Data System (ADS)

Urbánek, Michal; Flajšman, Lukáš; Křižáková, Viola; Gloss, Jonáš; Horký, Michal; Schmid, Michael; Varga, Peter

2018-06-01

Focused ion beam irradiation of metastable Fe78Ni22 thin films grown on Cu(100) substrates is used to create ferromagnetic, body-centered cubic patterns embedded into paramagnetic, face-centered-cubic surrounding. The structural and magnetic phase transformation can be controlled by varying parameters of the transforming gallium ion beam. The focused ion beam parameters such as the ion dose, number of scans, and scanning direction can be used not only to control a degree of transformation but also to change the otherwise four-fold in-plane magnetic anisotropy into the uniaxial anisotropy along a specific crystallographic direction. This change is associated with a preferred growth of specific crystallographic domains. The possibility to create magnetic patterns with continuous magnetization transitions and at the same time to create patterns with periodical changes in magnetic anisotropy makes this system an ideal candidate for rapid prototyping of a large variety of nanostructured samples. Namely, spin-wave waveguides and magnonic crystals can be easily combined into complex devices in a single fabrication step.

Waves and aggregation patterns in myxobacteria

NASA Astrophysics Data System (ADS)

Igoshin, Oleg A.; Welch, Roy; Kaiser, Dale; Oster, George

2004-03-01

Under starvation conditions, a population of myxobacteria aggregates to build a fruiting body whose shape is species-specific and within which the cells sporulate. Early in this process, cells often pass through a "ripple phase" characterized by traveling linear, concentric, and spiral waves. These waves are different from the waves observed during slime mold aggregation that depend on diffusible morphogens, because myxobacteria communicate by direct contact. The difference is most dramatic when waves collide: rather than annihilating one another, myxobacterial waves appear to pass through one another unchanged. Under certain conditions, the spacing and location of the nascent fruiting bodies is determined by the wavelength and pattern of the waves. Later in fruiting body development, waves are replaced by streams of cells that circulate around small initial aggregates enlarging and rounding them. Still later, pairs of motile aggregates coalesce to form larger aggregates that develop into fruiting bodies. Here we present a mathematical model that quantitatively explains these wave and aggregation phenomena.

Shear wave arrival time estimates correlate with local speckle pattern.

PubMed

Mcaleavey, Stephen A; Osapoetra, Laurentius O; Langdon, Jonathan

2015-12-01

We present simulation and phantom studies demonstrating a strong correlation between errors in shear wave arrival time estimates and the lateral position of the local speckle pattern in targets with fully developed speckle. We hypothesize that the observed arrival time variations are largely due to the underlying speckle pattern, and call the effect speckle bias. Arrival time estimation is a key step in quantitative shear wave elastography, performed by tracking tissue motion via cross-correlation of RF ultrasound echoes or similar methods. Variations in scatterer strength and interference of echoes from scatterers within the tracking beam result in an echo that does not necessarily describe the average motion within the beam, but one favoring areas of constructive interference and strong scattering. A swept-receive image, formed by fixing the transmit beam and sweeping the receive aperture over the region of interest, is used to estimate the local speckle pattern. Metrics for the lateral position of the speckle are found to correlate strongly (r > 0.7) with the estimated shear wave arrival times both in simulations and in phantoms. Lateral weighting of the swept-receive pattern improved the correlation between arrival time estimates and speckle position. The simulations indicate that high RF echo correlation does not equate to an accurate shear wave arrival time estimate-a high correlation coefficient indicates that motion is being tracked with high precision, but the location tracked is uncertain within the tracking beam width. The presence of a strong on-axis speckle is seen to imply high RF correlation and low bias. The converse does not appear to be true-highly correlated RF echoes can still produce biased arrival time estimates. The shear wave arrival time bias is relatively stable with variations in shear wave amplitude and sign (-20 μm to 20 μm simulated) compared with the variation with different speckle realizations obtained along a given tracking vector. We show that the arrival time bias is weakly dependent on shear wave amplitude compared with the variation with axial position/ local speckle pattern. Apertures of f/3 to f/8 on transmit and f/2 and f/4 on receive were simulated. Arrival time error and correlation with speckle pattern are most strongly determined by the receive aperture.

Shear Wave Arrival Time Estimates Correlate with Local Speckle Pattern

PubMed Central

McAleavey, Stephen A.; Osapoetra, Laurentius O.; Langdon, Jonathan

2016-01-01

We present simulation and phantom studies demonstrating a strong correlation between errors in shear wave arrival time estimates and the lateral position of the local speckle pattern in targets with fully developed speckle. We hypothesize that the observed arrival time variations are largely due to the underlying speckle pattern, and call the effect speckle bias. Arrival time estimation is a key step in quantitative shear wave elastography, performed by tracking tissue motion via cross correlation of RF ultrasound echoes or similar methods. Variations in scatterer strength and interference of echoes from scatterers within the tracking beam result in an echo that does not necessarily describe the average motion within the beam, but one favoring areas of constructive interference and strong scattering. A swept-receive image, formed by fixing the transmit beam and sweeping the receive aperture over the region of interest, is used to estimate the local speckle pattern. Metrics for the lateral position of the speckle are found to correlate strongly (r>0.7) with the estimated shear wave arrival times both in simulations and in phantoms. Lateral weighting of the swept-receive pattern improved the correlation between arrival time estimates and speckle position. The simulations indicate that high RF echo correlation does not equate to an accurate shear wave arrival time estimate – a high correlation coefficient indicates that motion is being tracked with high precision, but the location tracked is uncertain within the tracking beam width. The presence of a strong on-axis speckle is seen to imply high RF correlation and low bias. The converse does not appear to be true – highly correlated RF echoes can still produce biased arrival time estimates. The shear wave arrival time bias is relatively stable with variations in shear wave amplitude and sign (−20 μm to 20 μm simulated) compared to the variation with different speckle realizations obtained along a given tracking vector. We show that the arrival time bias is weakly dependent on shear wave amplitude compared to the variation with axial position/local speckle pattern. Apertures of f/3 to f/8 on transmit and f/2 and f/4 on receive were simulated. Arrival time error and correlation with speckle pattern are most strongly determined by the receive aperture. PMID:26670847

Investigating Storm-Induced Total Water Levels on Complex Barred Beaches

NASA Astrophysics Data System (ADS)

Cohn, N.; Ruggiero, P.; Walstra, D.

2013-12-01

Water levels in coastal environments are not static, but rather vary from a range of factors including mean sea level, tides, storm surge, and wave runup. Cumulatively these superimposed factors determine the total water level (TWL), the extent of which has major implications for coastal erosion and inundation during periods of high energy. Storm-induced, super-elevated water levels pose a threat to low lying coastal regions, as clearly demonstrated by recent events such as Hurricanes Sandy and Katrina. For this reason, the ability to accurately predict the TWL is crucial for both emergency managers and coastal planners. While some components of TWL are well understood (e.g., tides) there is still significant uncertainty in predicting runup, a process that can be a major contributor to instantaneous TWLs. Traditionally, empirical relationships derived from observational field data have been used to estimate runup, including wave setup and both incident and infragravity swash (Stockdon et al., 2006). While these formulations have shown skill in predicting the runup extent on natural beaches, these equations consider only the most basic contributing factors - namely the mean foreshore beach slope, the offshore wave height, and offshore wave period. Not included in these empirical estimates is the role of nearshore morphology on TWLs. However, it has long been recognized that nearshore sandbars act as natural barriers to coastal erosion during storm events by dissipating wave energy far from the beach face. Nonetheless, the influence of nearshore morphology on inner surf zone processes, including wave runup, is poorly understood. Recent pioneering studies (eg., Soldini et al., 2013 and Stephens et al., 2011) have explored the role of simple nearshore features (single Gaussian bars) on swash processes. Many locations in the world, however, are characterized by more complex morphologies such as multiple barred systems. Further, in many such places, including Columbia River Littoral Cell (USA), Duck, NC (USA), Hasaki (Japan), and the Netherlands, a net offshore bar migration (NOM) cycle has been observed whereby bars migrate seaward across the surf zone and decay offshore on interannual cycles. Depending on the stage of the cycle, the number and configuration of the bars may differ widely. For example in the Columbia River Littoral Cell there are typically 2 to 4 nearshore bars. In 1999, the outermost bar crest was located in a water depth of 6.5 m (relative to MLLW) while in 2009 it was located only in 3 m of water. Such large differences in nearshore morphology clearly influence wave breaking patterns and have the potential for influencing the corresponding wave runup as well. Here we apply a numerical, short-wave averaged yet long-wave resolving, non-linear hydrodynamic model (XBeach) to investigate the role that real world (non-synthetic), complex morphologies exert on TWLs. Model simulations under moderate to extreme wave forcing conditions are being used to develop relationships between offshore wave conditions, bar configuration, and runup extent. Additionally, we are exploring how, under the same wave conditions, a particular location may be more vulnerable to flooding simply based on the stage of the NOM cycle. Comparisons with the Stockdon et al. (2006) runup equation will be made to assess traditional empirical approaches relative to model predictions.

Numerical modeling of Gaussian beam propagation and diffraction in inhomogeneous media based on the complex eikonal equation

NASA Astrophysics Data System (ADS)

Huang, Xingguo; Sun, Hui

2018-05-01

Gaussian beam is an important complex geometrical optical technology for modeling seismic wave propagation and diffraction in the subsurface with complex geological structure. Current methods for Gaussian beam modeling rely on the dynamic ray tracing and the evanescent wave tracking. However, the dynamic ray tracing method is based on the paraxial ray approximation and the evanescent wave tracking method cannot describe strongly evanescent fields. This leads to inaccuracy of the computed wave fields in the region with a strong inhomogeneous medium. To address this problem, we compute Gaussian beam wave fields using the complex phase by directly solving the complex eikonal equation. In this method, the fast marching method, which is widely used for phase calculation, is combined with Gauss-Newton optimization algorithm to obtain the complex phase at the regular grid points. The main theoretical challenge in combination of this method with Gaussian beam modeling is to address the irregular boundary near the curved central ray. To cope with this challenge, we present the non-uniform finite difference operator and a modified fast marching method. The numerical results confirm the proposed approach.

Signature of phase singularities in diffusive regimes in disordered waveguide lattices: interplay and qualitative analysis.

PubMed

Ghosh, Somnath

2018-05-10

Coexistence and interplay between mesoscopic light dynamics with singular optics in spatially disordered waveguide lattices are reported. Two CW light beams of a 1.55 μm operating wavelength are launched as inputs to 1D waveguide lattices with controllable weak disorder in a complex refractive index profile. Direct observation of phase singularities in the speckle pattern along the length is numerically demonstrated. Quantitative analysis of the onset of such singular behavior and diffusive wave propagation is analyzed for the first time, to the best of our knowledge.

Conjugate field approaches for active array compensation

NASA Technical Reports Server (NTRS)

Acosta, R. J.

1989-01-01

Two approaches for calculating the compensating feed array complex excitations are namely, the indirect conjugate field matching (ICFM) and the direct conjugate field matching (DCFM) approach. In the ICFM approach the compensating feed array excitations are determined by considering the transmitting mode and the reciprocity principle. The DCF, in contrast calculates the array excitations by integrating directly the induced surface currents on the reflector under a receiving mode. DCFM allows the reflector to be illuminated by an incident plane wave with a tapered amplitude. The level of taper can effectively control the sidelobe level of the compensated antenna pattern. Both approaches are examined briefly.

Performance assessment techniques for Doppler radar physiological sensors.

PubMed

Hafner, Noah; Lubecke, Victor

2009-01-01

This paper presents a technique for assessing the performance of continuous wave Doppler radar systems for physiological sensing. The technique includes an artificial target for testing physiological sensing radar systems with motion analogous to human heart movement and software algorithms leveraging the capabilities of this target to simply test radar system performance. The mechanical target provides simple to complex patterns of motion that are stable and repeatable. Details of radar system performance can be assessed and the effects of configuration changes that might not appear with a human target can be observed when using this mechanical target.

Synchronization and spatiotemporal patterns in coupled phase oscillators on a weighted planar network

NASA Astrophysics Data System (ADS)

Kagawa, Yuki; Takamatsu, Atsuko

2009-04-01

To reveal the relation between network structures found in two-dimensional biological systems, such as protoplasmic tube networks in the plasmodium of true slime mold, and spatiotemporal oscillation patterns emerged on the networks, we constructed coupled phase oscillators on weighted planar networks and investigated their dynamics. Results showed that the distribution of edge weights in the networks strongly affects (i) the propensity for global synchronization and (ii) emerging ratios of oscillation patterns, such as traveling and concentric waves, even if the total weight is fixed. In-phase locking, traveling wave, and concentric wave patterns were, respectively, observed most frequently in uniformly weighted, center weighted treelike, and periphery weighted ring-shaped networks. Controlling the global spatiotemporal patterns with the weight distribution given by the local weighting (coupling) rules might be useful in biological network systems including the plasmodial networks and neural networks in the brain.

A gravitational test of wave reinforcement versus fluid density models

NASA Technical Reports Server (NTRS)

Johnson, Jacqueline Umstead

1990-01-01

Spermatozoa, protozoa, and algae form macroscopic patterns somewhat analogous to thermally driven convection cells. These bioconvective patterns have attracted interest in the fluid dynamics community, but whether in all cases these waves were gravity driven was unknown. There are two conflicting theories, one gravity dependent (fluid density model), the other gravity independent (wave reinforcement theory). The primary objectives of the summer faculty fellows were to: (1) assist in sample collection (spermatozoa) and preparation for the KC-135 research airplane experiment; and (2) to collaborate on ground testing of bioconvective variables such as motility, concentration, morphology, etc., in relation to their macroscopic patterns. Results are very briefly given.

Polluted and turbid water masses in Osaka Bay and its vicinity revealed with ERTS-A imageries

NASA Technical Reports Server (NTRS)

Watanabe, K.

1973-01-01

ERTS-1 took very valuable MSS imageries of Osaka Bay and its vicinity on October 24, 1972. In the MSS-4 and MSS-5 imageries a complex grey pattern of water masses can be seen. Though some of grey colored patterns seen in black and white prints of the MSS-4 and MSS-5 imageries are easily identified from their shapes as cloud covers or polluted water masses characterized by their color tone in longer wavelengths in the visible region, any correct distribution pattern of polluted or turbid water masses can be hardly detected separately from thin cloud covers in a quick look analysis. In the present investigation, a simple photographic technique was applied using the fact that reflected sun light from cloud including smog and inclined water surfaces of wave have a certain component in the near infrared region, that MSS-7, whereas the light scattered from fine materials suspended in the sea water has nearly no component sensible in MSS-4 and MSS-5 channels.

Characterization of spiraling patterns in spatial rock-paper-scissors games.

PubMed

Szczesny, Bartosz; Mobilia, Mauro; Rucklidge, Alastair M

2014-09-01

The spatiotemporal arrangement of interacting populations often influences the maintenance of species diversity and is a subject of intense research. Here, we study the spatiotemporal patterns arising from the cyclic competition between three species in two dimensions. Inspired by recent experiments, we consider a generic metapopulation model comprising "rock-paper-scissors" interactions via dominance removal and replacement, reproduction, mutations, pair exchange, and hopping of individuals. By combining analytical and numerical methods, we obtain the model's phase diagram near its Hopf bifurcation and quantitatively characterize the properties of the spiraling patterns arising in each phase. The phases characterizing the cyclic competition away from the Hopf bifurcation (at low mutation rate) are also investigated. Our analytical approach relies on the careful analysis of the properties of the complex Ginzburg-Landau equation derived through a controlled (perturbative) multiscale expansion around the model's Hopf bifurcation. Our results allow us to clarify when spatial "rock-paper-scissors" competition leads to stable spiral waves and under which circumstances they are influenced by nonlinear mobility.

A familiar pattern? Semantic memory contributes to the enhancement of visuo-spatial memories.

PubMed

Riby, Leigh M; Orme, Elizabeth

2013-03-01

In this study we quantify for the first time electrophysiological components associated with incorporating long-term semantic knowledge with visuo-spatial information using two variants of a traditional matrix patterns task. Results indicated that the matrix task with greater semantic content was associated with enhanced accuracy and RTs in a change-detection paradigm; this was also associated with increased P300 and N400 components as well as a sustained negative slow wave (NSW). In contrast, processing of the low semantic stimuli was associated with an increased N200 and a reduction in the P300. These findings suggest that semantic content can aid in reducing early visual processing of information and subsequent memory load by unitizing complex patterns into familiar forms. The N400/NSW may be associated with the requirements for maintaining visuo-spatial information about semantic forms such as orientation and relative location. Evidence for individual differences in semantic elaboration strategies used by participants is also discussed. Copyright © 2012 Elsevier Inc. All rights reserved.

Complexity-action duality of the shock wave geometry in a massive gravity theory

NASA Astrophysics Data System (ADS)

Miao, Yan-Gang; Zhao, Long

2018-01-01

On the holographic complexity dual to the bulk action, we investigate the action growth for a shock wave geometry in a massive gravity theory within the Wheeler-DeWitt (WDW) patch at the late time limit. For a global shock wave, the graviton mass does not affect the action growth in the bulk, i.e., the complexity on the boundary, showing that the action growth (complexity) is the same for both the Einstein gravity and the massive gravity. Nevertheless, for a local shock wave that depends on transverse coordinates, the action growth (complexity) caused by the boundary disturbance (perturbation) is proportional to the butterfly velocity for the two gravity theories, but the butterfly velocity of the massive gravity theory is smaller than that of the Einstein gravity theory, indicating that the action growth (complexity) of the massive gravity is depressed by the graviton mass. In addition, we extend the black hole thermodynamics of the massive gravity and obtain the right Smarr formula.

Waves associated to COMPLEX EVENTS observed by STEREO

NASA Astrophysics Data System (ADS)

Siu Tapia, A. L.; Blanco-Cano, X.; Kajdic, P.; Aguilar-Rodriguez, E.; Russell, C. T.; Jian, L. K.; Luhmann, J. G.

2012-12-01

Complex Events are formed by two or more large-scale solar wind structures which interact in space. Typical cases are interactions of: (i) a Magnetic Cloud/Interplanetary Coronal Mass Ejection (MC/ICME) with another MC/ICME transient; and (ii) an ICME followed by a Stream Interaction Region (SIR). Complex Events are of importance for space weather studies and studying them can enhance our understanding of collisionless plasma physics. Some of these structures can produce or enhance southward magnetic fields, a key factor in geomagnetic storm generation. Using data from the STEREO mission during the years 2006-2011, we found 17 Complex Events preceded by a shock wave. We use magnetic field and plasma data to study the micro-scale structure of the shocks, and the waves associated to these shocks and within Complex Events structures. To determine wave characteristics we perform Power Spectra and Minimum Variance Analysis. We also use PLASTIC WAP protons data to study foreshock extensions and the relationship between Complex Regions and particle acceleration to suprathermal energies.

Internal solitary waves on the Saya de Malha bank of the Mascarene Plateau: SAR observations and interpretation

NASA Astrophysics Data System (ADS)

New, A. L.; Magalhaes, J. M.; da Silva, J. C. B.

2013-09-01

Energetic Internal Solitary Waves (ISWs) were recently discovered radiating from the central region of the Mascarene Plateau in the south-western Indian Ocean (da Silva et al., 2011). SAR imagery revealed the two-dimensional structure of the waves which propagated for several hundred kilometres in deep water both to the east and west of a sill, located near 12.5°S, 61°E between the Saya de Malha and Nazareth banks. These waves were presumed to originate from the disintegration of a large lee wave formed on the western side of the sill at the time of maximum barotropic flow to the west. In the present paper we focus instead on ISWs propagating in the shallow water above the Saya da Malha (SM) bank (to the north of the sill), rather than on those propagating in deep water (here denominated as type-I or -II waves if propagating to the west or east respectively). Analysis of an extended SAR image dataset reveals strong sea surface signatures of complex patterns of ISWs propagating over the SM bank arising from different sources. We identify three distinct types of waves, and propose suitable generation mechanisms for them using synergy from different remotely sensed datasets, together with analyses of linear phase speeds (resulting from local stratification and bathymetry). In particular, we find a family of ISWs (termed here A-type waves) which results from the disintegration of a lee wave which forms on the western slopes of SM. We also identify two further wave trains (B- and C-type waves) which we suggest result from refraction of the deep water type-I and -II waves onto the SM bank. Therefore, both B- and C-type waves can be considered to result from the same generation source as the type-I and -II waves. Finally, we consider the implications of the ISWs for mixing and biological production over the SM bank, and provide direct evidence, from ocean colour satellite images, of enhanced surface chlorophyll over a shallow topographic feature on the bank, which is consistent with the breaking of the ISWs.

Integration of multiple theories for the simulation of laser interference lithography processes

NASA Astrophysics Data System (ADS)

Lin, Te-Hsun; Yang, Yin-Kuang; Fu, Chien-Chung

2017-11-01

The periodic structure of laser interference lithography (LIL) fabrication is superior to other lithography technologies. In contrast to traditional lithography, LIL has the advantages of being a simple optical system with no mask requirements, low cost, high depth of focus, and large patterning area in a single exposure. Generally, a simulation pattern for the periodic structure is obtained through optical interference prior to its fabrication through LIL. However, the LIL process is complex and combines the fields of optical and polymer materials; thus, a single simulation theory cannot reflect the real situation. Therefore, this research integrates multiple theories, including those of optical interference, standing waves, and photoresist characteristics, to create a mathematical model for the LIL process. The mathematical model can accurately estimate the exposure time and reduce the LIL process duration through trial and error.

Hemispherical Anisotropic Patterns of the Earth's Inner Core

NASA Astrophysics Data System (ADS)

Mattesini, M.; Belonoshko, A. B.; Buforn, E.; Ramirez, M.; Simak, S. I.; Udias, A.; Mao, H.; Ahuja, R.

2010-12-01

It has been shown that the Earth's inner core has an axisymmetric anisotropic structure with seismic waves travelling ˜3% faster along polar paths than along equatorial directions. However, hemispherical anisotropic patterns of solid Earth's core are rather complex, and the commonly used hexagonal-close-packed (hcp) iron phase might be insufficient to account for seismological observations. We show that the data we collected are in good agreement with the presence of two anisotropically specular east and west core hemispheres. The detected travel-time anomalies can only be disclosed by a lattice preferred orientation of a body-centered-cubic iron aggregate (bcc), having a fraction of their [111] crystal axes parallel to the Earth's rotation axis. This is a compelling evidence for the presence of a body-centered-cubic Fe phase at the top 100 km of the Earth's inner core.

Luminescent chemical waves in the Cu(II)-catalyzed oscillatory oxidation of SCN- ions with hydrogen peroxide.

PubMed

Pekala, Katarzyna; Jurczakowski, Rafał; Lewera, Adam; Orlik, Marek

2007-05-10

The oscillatory oxidation of thiocyanate ions with hydrogen peroxide, catalyzed by Cu2+ ions in alkaline media, was so far observed as occurring simultaneously in the entire space of the batch or flow reactor. We performed this reaction for the first time in the thin-layer reactor and observed the spatiotemporal course of the above process, in the presence of luminol as the chemiluminescent indicator. A series of luminescent patterns periodically starting from the random reaction center and spreading throughout the entire solution layer was reported. For a batch-stirred system, the bursts of luminescence were found to correlate with the steep decreases of the oscillating Pt electrode potential. These novel results open possibilities for further experimental and theoretical investigations of those spatiotemporal patterns, including studies of the mechanism of this chemically complex process.

Integration of multiple theories for the simulation of laser interference lithography processes.

PubMed

Lin, Te-Hsun; Yang, Yin-Kuang; Fu, Chien-Chung

2017-11-24

The periodic structure of laser interference lithography (LIL) fabrication is superior to other lithography technologies. In contrast to traditional lithography, LIL has the advantages of being a simple optical system with no mask requirements, low cost, high depth of focus, and large patterning area in a single exposure. Generally, a simulation pattern for the periodic structure is obtained through optical interference prior to its fabrication through LIL. However, the LIL process is complex and combines the fields of optical and polymer materials; thus, a single simulation theory cannot reflect the real situation. Therefore, this research integrates multiple theories, including those of optical interference, standing waves, and photoresist characteristics, to create a mathematical model for the LIL process. The mathematical model can accurately estimate the exposure time and reduce the LIL process duration through trial and error.

Analysis of rainfall over northern Peru during El Nino: A PCDS application

NASA Technical Reports Server (NTRS)

Goldberg, R.; Tisnado, G.

1986-01-01

In an examination of GOES satellite data during the 1982 through 1983 El Nino period, the appearance of lee wave cloud patterns was revealed. A correlation was hypothesized relating an anomalous easterly flow across the Andes with the appearance of these wave patterns and with the subsequent onset of intense rainfall. The cloud patterns are belived to be associated with the El Nino period and could be viewed as precursors to significant changes in weather patterns. The ultimate goal of the researchers will be the ability to predict occurrences of rainstorms associated with the appearance of lee waves and related cloud patterns as harbingers of destruction caused by flooding, huaycos, and other catastrophic consequences of heavy and abnormal rainfall. Rainfall data from about 70 stations in northern Peru from 1980 through 1984 were formatted to be utilized within the Pilot Climate Data System (PCDS). This time period includes the 1982 through 1983 El Nino period. As an example of the approach, a well-pronounced lee wave pattern was shown from a GOES satellite image of April 4, 1983. The ground truth data were then displayed via the PCDS to graphically demonstrate the increase in intensity and areal distribution of rainfall in the northern Peruvian area in the next 4 to 5 days.

An Integrated Analysis of MicroRNA and mRNA Expression Profiles to Identify RNA Expression Signatures in Lambskin Hair Follicles in Hu Sheep

PubMed Central

Lv, Xiaoyang; Sun, Wei; Yin, Jinfeng; Ni, Rong; Su, Rui; Wang, Qingzeng; Gao, Wen; Bao, Jianjun; Yu, Jiarui; Wang, Lihong; Chen, Ling

2016-01-01

Wave patterns in lambskin hair follicles are an important factor determining the quality of sheep’s wool. Hair follicles in lambskin from Hu sheep, a breed unique to China, have 3 types of waves, designated as large, medium, and small. The quality of wool from small wave follicles is excellent, while the quality of large waves is considered poor. Because no molecular and biological studies on hair follicles of these sheep have been conducted to date, the molecular mechanisms underlying the formation of different wave patterns is currently unknown. The aim of this article was to screen the candidate microRNAs (miRNA) and genes for the development of hair follicles in Hu sheep. Two-day-old Hu lambs were selected from full-sib individuals that showed large, medium, and small waves. Integrated analysis of microRNA and mRNA expression profiles employed high-throughout sequencing technology. Approximately 13, 24, and 18 differentially expressed miRNAs were found between small and large waves, small and medium waves, and medium and large waves, respectively. A total of 54, 190, and 81 differentially expressed genes were found between small and large waves, small and medium waves, and medium and large waves, respectively, by RNA sequencing (RNA-seq) analysis. Differentially expressed genes were classified using gene ontology and pathway analyses. They were found to be mainly involved in cell differentiation, proliferation, apoptosis, growth, immune response, and ion transport, and were associated with MAPK and the Notch signaling pathway. Reverse transcription-polymerase chain reaction (RT-PCR) analyses of differentially-expressed miRNA and genes were consistent with sequencing results. Integrated analysis of miRNA and mRNA expression indicated that, compared to small waves, large waves included 4 downregulated miRNAs that had regulatory effects on 8 upregulated genes and 3 upregulated miRNAs, which in turn influenced 13 downregulated genes. Compared to small waves, medium waves included 13 downregulated miRNAs that had regulatory effects on 64 upregulated genes and 4 upregulated miRNAs, which in turn had regulatory effects on 22 downregulated genes. Compared to medium waves, large waves consisted of 13 upregulated miRNAs that had regulatory effects on 48 downregulated genes. These differentially expressed miRNAs and genes may play a significant role in forming different patterns, and provide evidence for the molecular mechanisms underlying the formation of hair follicles of varying patterns. PMID:27404636

Synthesis of resistive tapers to control scattering patterns of strips

NASA Astrophysics Data System (ADS)

Haupt, Randy L.

Scattering occurs when an electromagnetic wave impinges on an object and creates currents in that object which reradiate other electromagnetic waves. Three primary methods exist to reduce microwave scattering from an object: covering it with absorber, changing its shape, and detuning it through impedance loading. Absorbers convert unwanted electromagnetic energy into heat. An example is lining an anechoic chamber with absorbers. Changing its shape channels energy from one direction to another, changes dominant scattering centers, or causes returns from one direction to another, changes dominant scattering centers, or causes returns from various parts to coherently add and cancel the total return. Impedance loading alters the resonant frequency of an object. Absorbers have the most attractive features. They have a broad bandwidth, attenuate the return in many directions, and may be used to reduce scattering from an object after the object is designed. Before trying to control scattering from complex shapes, such as an antenna or airplane, one should try to develop methods to control scattering from simple objects. A very simple object is two dimensional strip. It is infinitely thin, has a finite width, and an infinite length. The scattering pattern of the strip depends upon its width and material composition. Varying these two factors provides a means for controlling the radar cross-section (RCS) of the strip. The goal of this thesis is to synthesize resistive tapers for the strip that produce desired bistatic scattering and backscattering patterns.

Observation of frequency cutoff for self-excited dust acoustic waves

NASA Astrophysics Data System (ADS)

Nosenko, V.; Zhdanov, S. K.; Morfill, G. E.; Kim, S.-H.; Heinrich, J.; Merlino, R. L.

2009-11-01

Complex (dusty) plasmas consist of fine solid particles suspended in a weakly ionized gas. Complex plasmas are excellent model systems to study wave phenomena down to the level of individual ``atoms''. Spontaneously excited dust acoustic waves were observed with high temporal resolution in a suspension of micron-size kaolin particles in a dc discharge in argon. Wave activity was found at frequencies as high as 400 Hz. At high wave numbers, the wave dispersion relation was acoustic-like (frequency proportional to wave number). At low wave numbers, the wave frequency did not tend to zero, but reached a cutoff frequency fc instead. The value of fc declined with distance from the anode. We propose a simple model that explains the observed cutoff by particle confinement in plasma. The existence of a cutoff frequency is very important for the propagation of waves: the waves excited above fc are propagating, and those below fc are evanescent.

ULTRASONIC STUDIES OF THE FUNDAMENTAL MECHANISMS OF RECRYSTALLIZATION AND SINTERING OF METALS

DOE Office of Scientific and Technical Information (OSTI.GOV)

TURNER, JOSEPH A.

2005-11-30

The purpose of this project was to develop a fundamental understanding of the interaction of an ultrasonic wave with complex media, with specific emphases on recrystallization and sintering of metals. A combined analytical, numerical, and experimental research program was implemented. Theoretical models of elastic wave propagation through these complex materials were developed using stochastic wave field techniques. The numerical simulations focused on finite element wave propagation solutions through complex media. The experimental efforts were focused on corroboration of the models developed and on the development of new experimental techniques. The analytical and numerical research allows the experimental results to bemore » interpreted quantitatively.« less

Using an autonomous Wave Glider to detect seawater anomalies related to submarine groundwater discharge - engineering challenge

NASA Astrophysics Data System (ADS)

Leibold, P.; Brueckmann, W.; Schmidt, M.; Balushi, H. A.; Abri, O. A.

2017-12-01

Coastal aquifer systems are amongst the most precious and vulnerable water resources worldwide. While differing in lateral and vertical extent they commonly show a complex interaction with the marine realm. Excessive groundwater extraction can cause saltwater intrusion from the sea into the aquifers, having a strongly negative impact on the groundwater quality. While the reverse pathway, the discharge of groundwater into the sea is well understood in principle, it's mechanisms and quantities not well constrained. We will present a project that combines onshore monitoring and modeling of groundwater in the coastal plain of Salalah, Oman with an offshore autonomous robotic monitoring system, the Liquid Robotics Wave Glider. Eventually, fluxes detected by the Wave Glider system and the onshore monitoring of groundwater will be combined into a 3-D flow model of the coastal and deeper aquifers. The main tool for offshore SGD investigation project is a Wave Glider, an autonomous vehicle based on a new propulsion technology. The Wave Glider is a low-cost satellite-connected marine craft, consisting of a combination of a sea-surface and an underwater component which is propelled by the conversion of ocean wave energy into forward thrust. While the wave energy propulsion system is purely mechanical, electrical energy for onboard computers, communication and sensors is provided by photovoltaic cells. For the project the SGD Wave Glider is being equipped with dedicated sensors to measure temperature, conductivity, Radon isotope (222Rn, 220Rn) activity concentration as well as other tracers of groundwater discharge. Dedicated software using this data input will eventually allow the Wave Glider to autonomously collect information and actively adapt its search pattern to hunt for spatial and temporal anomalies. Our presentation will focus on the engineering and operational challenges ofdetecting submarine groundwater discharges with the Wave Glider system in the Bay of Salalah, Oman and solutions to overcome them.

Wave field synthesis of moving virtual sound sources with complex radiation properties.

PubMed

Ahrens, Jens; Spors, Sascha

2011-11-01

An approach to the synthesis of moving virtual sound sources with complex radiation properties in wave field synthesis is presented. The approach exploits the fact that any stationary sound source of finite spatial extent radiates spherical waves at sufficient distance. The angular dependency of the radiation properties of the source under consideration is reflected by the amplitude and phase distribution on the spherical wave fronts. The sound field emitted by a uniformly moving monopole source is derived and the far-field radiation properties of the complex virtual source under consideration are incorporated in order to derive a closed-form expression for the loudspeaker driving signal. The results are illustrated via numerical simulations of the synthesis of the sound field of a sample moving complex virtual source.

Foraging in corallivorous butterflyfish varies with wave exposure

NASA Astrophysics Data System (ADS)

Noble, Mae M.; Pratchett, Morgan S.; Coker, Darren J.; Cvitanovic, Christopher; Fulton, Christopher J.

2014-06-01

Understanding the foraging patterns of reef fishes is crucial for determining patterns of resource use and the sensitivity of species to environmental change. While changes in prey availability and interspecific competition have been linked to patterns of prey selection, body condition, and survival in coral reef fishes, rarely has the influence of abiotic environmental conditions on foraging been considered. We used underwater digital video to explore how prey availability and wave exposure influence the behavioural time budgets and prey selectivity of four species of obligate coral-feeding butterflyfishes. All four species displayed high selectivity towards live hard corals, both in terms of time invested and frequency of searching and feeding events. However, our novel analysis revealed that such selectivity was sensitive to wave exposure in some species, despite there being no significant differences in the availability of each prey category across exposures. In most cases, these obligate corallivores increased their selectivity towards their most favoured prey types at sites of high wave exposure. This suggests there are costs to foraging under different wave environments that can shape the foraging patterns of butterflyfishes in concert with other conditions such as prey availability, interspecific competition, and territoriality. Given that energy acquisition is crucial to the survival and fitness of fishes, we highlight how such environmental forcing of foraging behaviour may influence the ecological response of species to the ubiquitous and highly variable wave climates of shallow coral reefs.

T wave abnormalities, high body mass index, current smoking and high lipoprotein (a) levels predict the development of major abnormal Q/QS patterns 20 years later. A population-based study

PubMed Central

Moller, Christina Strom; Byberg, Liisa; Sundstrom, Johan; Lind, Lars

2006-01-01

Background Most studies on risk factors for development of coronary heart disease (CHD) have been based on the clinical outcome of CHD. Our aim was to identify factors that could predict the development of ECG markers of CHD, such as abnormal Q/QS patterns, ST segment depression and T wave abnormalities, in 70-year-old men, irrespective of clinical outcome. Methods Predictors for development of different ECG abnormalities were identified in a population-based study using stepwise logistic regression. Anthropometrical and metabolic factors, ECG abnormalities and vital signs from a health survey of men at age 50 were related to ECG abnormalities identified in the same cohort 20 years later. Results At the age of 70, 9% had developed a major abnormal Q/QS pattern, but 63% of these subjects had not been previously hospitalized due to MI, while 57% with symptomatic MI between age 50 and 70 had no major Q/QS pattern at age 70. T wave abnormalities (Odds ratio 3.11, 95% CI 1.18–8.17), high lipoprotein (a) levels, high body mass index (BMI) and smoking were identified as significant independent predictors for the development of abnormal major Q/QS patterns. T wave abnormalities and high fasting glucose levels were significant independent predictors for the development of ST segment depression without abnormal Q/QS pattern. Conclusion T wave abnormalities on resting ECG should be given special attention and correlated with clinical information. Risk factors for major Q/QS patterns need not be the same as traditional risk factors for clinically recognized CHD. High lipoprotein (a) levels may be a stronger risk factor for silent myocardial infarction (MI) compared to clinically recognized MI. PMID:16519804

Acoustic beam steering by light refraction: illustration with directivity patterns of a tilted volume photoacoustic source.

PubMed

Raetz, Samuel; Dehoux, Thomas; Perton, Mathieu; Audoin, Bertrand

2013-12-01

The symmetry of a thermoelastic source resulting from laser absorption can be broken when the direction of light propagation in an elastic half-space is inclined relatively to the surface. This leads to an asymmetry of the directivity patterns of both compressional and shear acoustic waves. In contrast to classical surface acoustic sources, the tunable volume source allows one to take advantage of the mode conversion at the surface to control the directivity of specific modes. Physical interpretations of the evolution of the directivity patterns with the increasing light angle of incidence and of the relations between the preferential directions of compressional- and shear-wave emission are proposed. In order to compare calculated directivity patterns with measurements of normal displacement amplitudes performed on plates, a procedure is proposed to transform the directivity patterns into pseudo-directivity patterns representative of the experimental conditions. The comparison of the theoretical with measured pseudo-directivity patterns demonstrates the ability to enhance bulk-wave amplitudes and to steer specific bulk acoustic modes by adequately tuning light refraction.

Aggregation Dynamics Using Phase Wave Signals and Branching Patterns

NASA Astrophysics Data System (ADS)

Sakaguchi, Hidetsugu; Kusagaki, Takuma

2016-09-01

The aggregation dynamics of slime mold is studied using coupled equations of phase ϕ and cell concentration n. Phase waves work as tactic signals for aggregation. Branching structures appear during the aggregation. A stationary branching pattern appears like a river network, if cells are uniformly supplied into the system.

Surfing the Pacific Island chains: linking internal wave energetics to coral reef benthic community patterns.

NASA Astrophysics Data System (ADS)

Painter Jones, Matilda; Green, Mattias; Gove, Jamison; Williams, Gareth

2017-04-01

The ocean is saturated with internal waves at tidal frequency. The energy associated with conversion from barotropic to baroclinic can enhance mixing and upwelling at sites of generation and dissipation, which in turn can drive primary production. Hotspots of internal wave generation are located at sudden changes in topography with the Hawaiian archipelago identified as an area of intense internal wave activity. The role of internal waves as a driver of benthic reef community is unexplored and could be key to coral reefs survival in the unknown future. Using a Pacific wide map of internal wave flux and barotropic-to-baroclinic conversion at an unprecedented 1/30th degree resolution, energy budgets were developed for four islands to evaluate dissipation and generation of internal waves. Spatiotemporal variations in benthic community structure were plotted around each island and related to changes in internal wave energetics using a boosted regression tree. Contrasting spatial patterns and species assemblages were seen around islands with distinct internal wave regimes. The relative importance and influence of internal waves on coral reef ecosystems is evaluated.

User's guide for a computer program for calculating the zero-lift wave drag of complex aircraft configurations

NASA Technical Reports Server (NTRS)

Craidon, C. B.

1983-01-01

A computer program was developed to extend the geometry input capabilities of previous versions of a supersonic zero lift wave drag computer program. The arbitrary geometry input description is flexible enough to describe almost any complex aircraft concept, so that highly accurate wave drag analysis can now be performed because complex geometries can be represented accurately and do not have to be modified to meet the requirements of a restricted input format.

Design for navigation improvements at Nome Harbor, Alaska: Coastal model investigation. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bottin, R.R.; Acuff, H.F.

1998-09-01

A 1:90-scale (undistorted) three dimensional coastal hydraulic model was used to investigate the design of proposed navigation improvements at Nome Harbor, Alaska, with respect to wave, current, and shoaling conditions at the site. The model reproduced about 3,350 m (11,000 ft) of the Alaskan shoreline, the existing harbor and lower reaches of the Snake River, and sufficient offshore bathymetry in the Norton Sound to permit generation of the required experimental waves. The model was used to determine the impacts of a new entrance channel on wave-induced current patterns and magnitudes, sediment transport patterns, and wave conditions in the new channelmore » and harbor area, as well as to optimize the lengths and alignments of new breakwaters and causeway extensions. A 24.4-m-long (9O-ft-long) unidirectional, spectral wave generator, and automated data acquisition and control system, and a crushed coal tracer material were utilized in model operation. It was concluded from study results that: (a) existing conditions are characterized by rough and turbulent wave conditions in the existing entrance. Very confused wave patterns were observed in the entrance due to wave energy reflected off the vertical walls lining the entrance. Wave heights in excess of 1.5 m (5 ft) were obtained in the entrance for typical storm conditions; and wave heights of almost 3.7 m (12 ft) were obtained in the entrance for 5O-year storm wave conditions with extreme high-water level 4 m (+13 ft); (b) wave conditions along the vertical-faced causeway docks were excessive for existing conditions. Wave heights in excess of 3.7 and 2.7 m (12 and 9 ft) were obtained along the outer and inner docks, respectively, for typical storm conditions; and wave heights of almost 7 and 5.8 m (23 and 19 ft) were recorded along these docks, respectively, for 5-year storm wave conditions with extreme high-water levels.« less

Wave processes in the human cardiovascular system: The measuring complex, computing models, and diagnostic analysis

NASA Astrophysics Data System (ADS)

Ganiev, R. F.; Reviznikov, D. L.; Rogoza, A. N.; Slastushenskiy, Yu. V.; Ukrainskiy, L. E.

2017-03-01

A description of a complex approach to investigation of nonlinear wave processes in the human cardiovascular system based on a combination of high-precision methods of measuring a pulse wave, mathematical methods of processing the empirical data, and methods of direct numerical modeling of hemodynamic processes in an arterial tree is given.

Selection of intracellular calcium patterns in a model with clustered Ca2+ release channels

NASA Astrophysics Data System (ADS)

Shuai, J. W.; Jung, P.

2003-03-01

A two-dimensional model is proposed for intracellular Ca2+ waves, which incorporates both the discrete nature of Ca2+ release sites in the endoplasmic reticulum membrane and the stochastic dynamics of the clustered inositol 1,4,5-triphosphate (IP3) receptors. Depending on the Ca2+ diffusion coefficient and concentration of IP3, various spontaneous Ca2+ patterns, such as calcium puffs, local waves, abortive waves, global oscillation, and tide waves, can be observed. We further investigate the speed of the global waves as a function of the IP3 concentration and the Ca2+ diffusion coefficient and under what conditions the spatially averaged Ca2+ response can be described by a simple set of ordinary differential equations.

Nucleation promoting factors regulate the expression and localization of Arp2/3 complex during meiosis of mouse oocytes.

PubMed

Liu, Jun; Wang, Qiao-Chu; Wang, Fei; Duan, Xing; Dai, Xiao-Xin; Wang, Teng; Liu, Hong-Lin; Cui, Xiang-Shun; Kim, Nam-Hyung; Sun, Shao-Chen

2012-01-01

The actin nucleation factor Arp2/3 complex is a main regulator of actin assembly and is involved in multiple processes like cell migration and adhesion, endocytosis, and the establishment of cell polarity in mitosis. Our previous work showed that the Arp2/3 complex was involved in the actin-mediated mammalian oocyte asymmetric division. However, the regulatory mechanisms and signaling pathway of Arp2/3 complex in meiosis is still unclear. In the present work, we identified that the nucleation promoting factors (NPFs) JMY and WAVE2 were necessary for the expression and localization of Arp2/3 complex in mouse oocytes. RNAi of both caused the degradation of actin cap intensity, indicating the roles of NPFs in the formation of actin cap. Moreover, JMY and WAVE2 RNAi decreased the expression of ARP2, a key component of Arp2/3 complex. However, knock down of Arp2/3 complex by Arpc2 and Arpc3 siRNA microinjection did not affect the expression and localization of JMY and WAVE2. Our results indicate that the NPFs, JMY and WAVE2, are upstream regulators of Arp2/3 complex in mammalian oocyte asymmetric division.

Controlling Tensegrity Robots through Evolution using Friction based Actuation

NASA Technical Reports Server (NTRS)

Kothapalli, Tejasvi; Agogino, Adrian K.

2017-01-01

Traditional robotic structures have limitations in planetary exploration as their rigid structural joints are prone to damage in new and rough terrains. In contrast, robots based on tensegrity structures, composed of rods and tensile cables, offer a highly robust, lightweight, and energy efficient solution over traditional robots. In addition tensegrity robots can be highly configurable by rearranging their topology of rods, cables and motors. However, these highly configurable tensegrity robots pose a significant challenge for locomotion due to their complexity. This study investigates a control pattern for successful locomotion in tensegrity robots through an evolutionary algorithm. A twelve-rod hardware model is rapidly prototyped to utilize a new actuation method based on friction. A web-based physics simulation is created to model the twelve-rod tensegrity ball structure. Square-waves are used as control policies for the actuators of the tensegrity structure. Monte Carlo trials are run to find the most successful number of amplitudes for the square-wave control policy. From the results, an evolutionary algorithm is implemented to find the most optimized solution for locomotion of the twelve-rod tensegrity structure. The software pattern coupled with the new friction based actuation method can serve as the basis for highly efficient tensegrity robots in space exploration.

Interaction of Phase Singularities on Spiral Wave Tail: Reconsideration of Capturing the Excitable Gap.

PubMed

Tomii, Naoki; Yamazaki, Masatoshi; Arafune, Tatsuhiko; Kamiya, Kaichiro; Nakazawa, Kazuo; Honjo, Haruo; Shibata, Nitaro; Sakuma, Ichiro

2018-03-09

The action mechanism of stimulation toward spiral waves (SWs) owing to the complex excitation patterns that occur just after point stimulation has not yet been experimentally clarified. This study sought to test our hypothesis that the effect of capturing excitable gap of SW by stimulation can also be explained as the interaction of original phase singularity (PS) and PSs induced by the stimulation on the wave tail (WT) of the original SW. Phase variance analysis was used to quantitatively analyze the post-shock PS trajectories. In a two-dimensional subepicardial layer of Langendorff-perfused rabbit hearts, optical mapping was utilized to record the excitation pattern during stimulation. After SW was induced by S1-S2 shock, single biphasic point stimulation S3 was applied. In 70 of the S1-S2-S3 stimulation episodes applied on six hearts, the original PS was clearly observed just before the S3 point stimulation in 37 episodes. Pairwise PSs were newly induced by the S3 in 20 episodes. The original PS collided with the newly-induced PSs in 16 episodes; otherwise, they did not interact with the original PS. SW shift occurred most efficiently when the S3 shock was applied at the relative refractory period, and PS shifted in the direction of WT. Quantitative tracking of PS clarified that stimulation in desirable conditions induces pairwise PSs on WT and that the collision of PSs causes SW shift along the WT. Results of this study indicate the importance of the interaction of shock-induced excitation with the WT for effective stimulation.

Seizure-onset patterns in focal cortical dysplasia and neurodevelopmental tumors: Relationship with surgical prognosis and neuropathologic subtypes.

PubMed

Lagarde, Stanislas; Bonini, Francesca; McGonigal, Aileen; Chauvel, Patrick; Gavaret, Martine; Scavarda, Didier; Carron, Romain; Régis, Jean; Aubert, Sandrine; Villeneuve, Nathalie; Giusiano, Bernard; Figarella-Branger, Dominique; Trebuchon, Agnès; Bartolomei, Fabrice

2016-09-01

The study of intracerebral electroencephalography (EEG) seizure-onset patterns is crucial to accurately define the epileptogenic zone and guide successful surgical resection. It also raises important pathophysiologic issues concerning mechanisms of seizure generation. Until now, several seizure-onset patterns have been described using distinct recording methods (subdural, depth electrode), mostly in temporal lobe epilepsies or with heterogeneous neocortical lesions. We analyzed data from a cohort of 53 consecutive patients explored by stereoelectroencephalography (SEEG) and with pathologically confirmed malformation of cortical development (MCD; including focal cortical dysplasia [FCD] and neurodevelopmental tumors [NDTs]). We identified six seizure-onset patterns using visual and time-frequency analysis: low-voltage fast activity (LVFA); preictal spiking followed by LVFA; burst of polyspikes followed by LVFA; slow wave/DC shift followed by LVFA; theta/alpha sharp waves; and rhythmic spikes/spike-waves. We found a high prevalence of patterns that included LVFA (83%), indicating nevertheless that LVFA is not a constant characteristic of seizure onset. An association between seizure-onset patterns and histologic types was found (p = 001). The more prevalent patterns were as follows: (1) in FCD type I LVFA (23.1%) and slow wave/baseline shift followed by LVFA (15.4%); (2) in FCD type II burst of polyspikes followed by LVFA (31%), LVFA (27.6%), and preictal spiking followed by LVFA (27.6%); (3) in NDT, LVFA (54.5%). We found that a seizure-onset pattern that included LVFA was associated with favorable postsurgical outcome, but the completeness of the EZ resection was the sole independent predictive variable. Six different seizure-onset patterns can be described in FCD and NDT. Better postsurgical outcome is associated with patterns that incorporate LVFA. Wiley Periodicals, Inc. © 2016 International League Against Epilepsy.

Processing ultrasonic inspection data from multiple scan patterns for turbine rotor weld build-up evaluations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guan, Xuefei; Zhou, S. Kevin; Rasselkorde, El Mahjoub

The study presents a data processing methodology for weld build-up using multiple scan patterns. To achieve an overall high probability of detection for flaws with different orientations, an inspection procedure with three different scan patterns is proposed. The three scan patterns are radial-tangential longitude wave pattern, axial-radial longitude wave pattern, and tangential shear wave pattern. Scientific fusion of the inspection data is implemented using volume reconstruction techniques. The idea is to perform spatial domain forward data mapping for all sampling points. A conservative scheme is employed to handle the case that multiple sampling points are mapped to one grid location.more » The scheme assigns the maximum value for the grid location to retain the largest equivalent reflector size for the location. The methodology is demonstrated and validated using a realistic ring of weld build-up. Tungsten balls and bars are embedded to the weld build-up during manufacturing process to represent natural flaws. Flat bottomed holes and side drilled holes are installed as artificial flaws. Automatic flaw identification and extraction are demonstrated. Results indicate the inspection procedure with multiple scan patterns can identify all the artificial and natural flaws.« less

Processing ultrasonic inspection data from multiple scan patterns for turbine rotor weld build-up evaluations

NASA Astrophysics Data System (ADS)

Guan, Xuefei; Rasselkorde, El Mahjoub; Abbasi, Waheed; Zhou, S. Kevin

2015-03-01

The study presents a data processing methodology for weld build-up using multiple scan patterns. To achieve an overall high probability of detection for flaws with different orientations, an inspection procedure with three different scan patterns is proposed. The three scan patterns are radial-tangential longitude wave pattern, axial-radial longitude wave pattern, and tangential shear wave pattern. Scientific fusion of the inspection data is implemented using volume reconstruction techniques. The idea is to perform spatial domain forward data mapping for all sampling points. A conservative scheme is employed to handle the case that multiple sampling points are mapped to one grid location. The scheme assigns the maximum value for the grid location to retain the largest equivalent reflector size for the location. The methodology is demonstrated and validated using a realistic ring of weld build-up. Tungsten balls and bars are embedded to the weld build-up during manufacturing process to represent natural flaws. Flat bottomed holes and side drilled holes are installed as artificial flaws. Automatic flaw identification and extraction are demonstrated. Results indicate the inspection procedure with multiple scan patterns can identify all the artificial and natural flaws.

Classical reconstruction of interference patterns of position-wave-vector-entangled photon pairs by the time-reversal method

NASA Astrophysics Data System (ADS)

Ogawa, Kazuhisa; Kobayashi, Hirokazu; Tomita, Akihisa

2018-02-01

The quantum interference of entangled photons forms a key phenomenon underlying various quantum-optical technologies. It is known that the quantum interference patterns of entangled photon pairs can be reconstructed classically by the time-reversal method; however, the time-reversal method has been applied only to time-frequency-entangled two-photon systems in previous experiments. Here, we apply the time-reversal method to the position-wave-vector-entangled two-photon systems: the two-photon Young interferometer and the two-photon beam focusing system. We experimentally demonstrate that the time-reversed systems classically reconstruct the same interference patterns as the position-wave-vector-entangled two-photon systems.

Laser direct synthesis and patterning of silver nano/microstructures on a polymer substrate.

PubMed

Liu, Yi-Kai; Lee, Ming-Tsang

2014-08-27

This study presents a novel approach for the rapid fabrication of conductive nano/microscale metal structures on flexible polymer substrate (polyimide). Silver film is simultaneously synthesized and patterned on the polyimide substrate using an advanced continuous wave (CW) laser direct writing technology and a transparent, particle-free reactive silver ion ink. The location and shape of the resulting silver patterns are written by a laser beam from a digitally controlled micromirror array device. The silver patterns fabricated by this laser direct synthesis and patterning (LDSP) process exhibit the remarkably low electrical resistivity of 2.1 μΩ cm, which is compatible to the electrical resistivity of bulk silver. This novel LDSP process requires no vacuum chamber or photomasks, and the steps needed for preparation of the modified reactive silver ink are simple and straightforward. There is none of the complexity and instability associated with the synthesis of the nanoparticles that are encountered for the conventional laser direct writing technology which involves nanoparticle sintering process. This LDSP technology is an advanced method of nano/microscale selective metal patterning on flexible substrates that is fast and environmentally benign and shows potential as a feasible process for the roll-to-roll manufacturing of large area flexible electronic devices.

Enhanced vertical mixing within mesoscale eddies due to high frequency winds in the South China Sea

NASA Astrophysics Data System (ADS)

Cardona, Yuley; Bracco, Annalisa

The South China Sea is a marginal basin with a complex circulation influenced by the East Asian Monsoon, river discharge and intricate bathymetry. As a result, both the mesoscale eddy field and the near-inertial energy distribution display large spatial variability and they strongly influence the oceanic transport and mixing. With an ensemble of numerical integrations using a regional ocean model, this work investigates how the temporal resolution of the atmospheric forcing fields modifies the horizontal and vertical velocity patterns and impacts the transport properties in the basin. The response of the mesoscale circulation in the South China Sea is investigated under three different forcing conditions: monthly, daily and 6-hourly momentum and heat fluxes. While the horizontal circulation does not display significant differences, the representation of the vertical velocity field displays high sensitivity to the frequency of the wind forcing. If the wind field contains energy at the inertial frequency or higher (daily and 6-hourly cases), then submesoscale fronts, vortex Rossby waves and near inertial waves are excited as ageostrophic expression of the vigorous eddy field. Those quasi- and near-inertial waves dominate the vertical velocity field in the mixed layer (vortex Rossby waves) and below the first hundred meters (near inertial waves) and they are responsible for the differences in the vertical transport properties under the various forcing fields as quantified by frequency spectra, vertical velocity profiles and vertical dispersion of Lagrangian tracers.

Dissipative quantum trajectories in complex space: Damped harmonic oscillator

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chou, Chia-Chun, E-mail: ccchou@mx.nthu.edu.tw

Dissipative quantum trajectories in complex space are investigated in the framework of the logarithmic nonlinear Schrödinger equation. The logarithmic nonlinear Schrödinger equation provides a phenomenological description for dissipative quantum systems. Substituting the wave function expressed in terms of the complex action into the complex-extended logarithmic nonlinear Schrödinger equation, we derive the complex quantum Hamilton–Jacobi equation including the dissipative potential. It is shown that dissipative quantum trajectories satisfy a quantum Newtonian equation of motion in complex space with a friction force. Exact dissipative complex quantum trajectories are analyzed for the wave and solitonlike solutions to the logarithmic nonlinear Schrödinger equation formore » the damped harmonic oscillator. These trajectories converge to the equilibrium position as time evolves. It is indicated that dissipative complex quantum trajectories for the wave and solitonlike solutions are identical to dissipative complex classical trajectories for the damped harmonic oscillator. This study develops a theoretical framework for dissipative quantum trajectories in complex space.« less

Laser-driven deflection arrangements and methods involving charged particle beams

DOEpatents

Plettner, Tomas [San Ramon, CA; Byer, Robert L [Stanford, CA

2011-08-09

Systems, methods, devices and apparatus are implemented for producing controllable charged particle beams. In one implementation, an apparatus provides a deflection force to a charged particle beam. A source produces an electromagnetic wave. A structure, that is substantially transparent to the electromagnetic wave, includes a physical structure having a repeating pattern with a period L and a tilted angle .alpha., relative to a direction of travel of the charged particle beam, the pattern affects the force of the electromagnetic wave upon the charged particle beam. A direction device introduces the electromagnetic wave to the structure to provide a phase-synchronous deflection force to the charged particle beam.

Laser-speckle-visibility acoustic spectroscopy in soft turbid media.

PubMed

Wintzenrieth, Frédéric; Cohen-Addad, Sylvie; Le Merrer, Marie; Höhler, Reinhard

2014-01-01

We image the evolution in space and time of an acoustic wave propagating along the surface of turbid soft matter by shining coherent light on the sample. The wave locally modulates the speckle interference pattern of the backscattered light, which is recorded using a camera. We show both experimentally and theoretically how the temporal and spatial correlations in this pattern can be analyzed to obtain the acoustic wavelength and attenuation length. The technique is validated using shear waves propagating in aqueous foam. It may be applied to other kinds of acoustic waves in different forms of turbid soft matter such as biological tissues, pastes, or concentrated emulsions.

Laser-speckle-visibility acoustic spectroscopy in soft turbid media

NASA Astrophysics Data System (ADS)

Wintzenrieth, Frédéric; Cohen-Addad, Sylvie; Le Merrer, Marie; Höhler, Reinhard

2014-01-01

We image the evolution in space and time of an acoustic wave propagating along the surface of turbid soft matter by shining coherent light on the sample. The wave locally modulates the speckle interference pattern of the backscattered light, which is recorded using a camera. We show both experimentally and theoretically how the temporal and spatial correlations in this pattern can be analyzed to obtain the acoustic wavelength and attenuation length. The technique is validated using shear waves propagating in aqueous foam. It may be applied to other kinds of acoustic waves in different forms of turbid soft matter such as biological tissues, pastes, or concentrated emulsions.

Wave energy and swimming performance shape coral reef fish assemblages

PubMed Central

Fulton, C.J; Bellwood, D.R; Wainwright, P.C

2005-01-01

Physical factors often have an overriding influence on the distribution patterns of organisms, and can ultimately shape the long-term structure of communities. Although distribution patterns in sessile marine organisms have frequently been attributed to functional characteristics interacting with wave-induced water motion, similar evidence for mobile organisms is lacking. Links between fin morphology and swimming performance were examined in three diverse coral reef fish families from two major evolutionary lineages. Among-habitat variation in morphology and performance was directly compared with quantitative values of wave-induced water motion from seven coral reef habitats of different depth and wave exposure on the Great Barrier Reef. Fin morphology was strongly correlated with both field and experimental swimming speeds in all three families. The range of observed swimming speeds coincided closely with the magnitude of water velocities commonly found on coral reefs. Distribution patterns in all three families displayed highly congruent relationships between fin morphology and wave-induced water motion. Our findings indicate a general functional relationship between fin morphology and swimming performance in labriform-swimming fishes, and provide quantitative evidence that wave energy may directly influence the assemblage structure of coral reef fishes through interactions with morphology and swimming performance. PMID:15888415

Reorganization of pathological control functions of memory-A neural model for tissue healing by shock waves

NASA Astrophysics Data System (ADS)

Wess, Othmar

2005-04-01

Since 1980 shock waves have proven effective in the field of extracorporeal lithotripsy. More than 10 years ago shock waves were successfully applied for various indications such as chronic pain, non-unions and, recently, for angina pectoris. These fields do not profit from the disintegration power but from stimulating and healing effects of shock waves. Increased metabolism and neo-vascularization are reported after shock wave application. According to C. J. Wang, a biological cascade is initiated, starting with a stimulating effect of physical energy resulting in increased circulation and metabolism. Pathological memory of neural control patterns is considered the reason for different pathologies characterized by insufficient metabolism. This paper presents a neural model for reorganization of pathological reflex patterns. The model acts on associative memory functions of the brain based on modification of synaptic junctions. Accordingly, pathological memory effects of the autonomous nervous system are reorganized by repeated application of shock waves followed by development of normal reflex patterns. Physiologic control of muscle and vascular tone is followed by increased metabolism and tissue repair. The memory model may explain hyper-stimulation effects in pain therapy.

Structure of Kinetic Alfvén Waves of Small Transverse Scale

NASA Astrophysics Data System (ADS)

Morales, G. J.; Maggs, J. E.

1996-11-01

This analytical study illustrates the spatial pattern of kinetic Alfvén waves excited by a current-modulating disk whose dimension R transverse to the confining magnetic field is comparable to cs / Ω_i. The radial structure of the wave azimuthal magnetic field consists of 3 regions: a Bessel function behavior for r < R, a near null at r ~ R, and a driven Airy pattern for r >> R. The pattern spreads at an angle given by tan θ = (ω/Ω_i)(c_s/V_A)/(2 \\cdot 6), where ω is the modulation frequency and VA the Alfvén speed. This arises because there is a maximum value at finite k_⊥ for the ratio of the perpendicular to parallel group velocity, which differs from the cone spreading(G.J. Morales, R.S. Loritsch, and J.E. Maggs, Phys. Plasmas) 1, 3765 (1994) associated with inertial Alfvén waves. Sponsored by ONR

Visual Circuit Development Requires Patterned Activity Mediated by Retinal Acetylcholine Receptors

PubMed Central

Burbridge, Timothy J.; Xu, Hong-Ping; Ackman, James B.; Ge, Xinxin; Zhang, Yueyi; Ye, Mei-Jun; Zhou, Z. Jimmy; Xu, Jian; Contractor, Anis; Crair, Michael C.

2014-01-01

SUMMARY The elaboration of nascent synaptic connections into highly ordered neural circuits is an integral feature of the developing vertebrate nervous system. In sensory systems, patterned spontaneous activity before the onset of sensation is thought to influence this process, but this conclusion remains controversial largely due to the inherent difficulty recording neural activity in early development. Here, we describe novel genetic and pharmacological manipulations of spontaneous retinal activity, assayed in vivo, that demonstrate a causal link between retinal waves and visual circuit refinement. We also report a de-coupling of downstream activity in retinorecipient regions of the developing brain after retinal wave disruption. Significantly, we show that the spatiotemporal characteristics of retinal waves affect the development of specific visual circuits. These results conclusively establish retinal waves as necessary and instructive for circuit refinement in the developing nervous system and reveal how neural circuits adjust to altered patterns of activity prior to experience. PMID:25466916

Emergence and transitions of dynamic patterns of thickness oscillation of the plasmodium of the true slime mold Physarum polycephalum

NASA Astrophysics Data System (ADS)

Takagi, Seiji; Ueda, Tetsuo

2008-03-01

The emergence and transitions of various spatiotemporal patterns of thickness oscillation were studied in the freshly isolated protoplasm of the Physarum plasmodium. New patterns, such as standing waves, and chaotic and rotating spirals, developed successively before the well-documented synchronous pattern appeared. There was also a spontaneous opposite transition from synchrony to chaotic and rotating spirals. Rotating spiral waves were observed in the large migrating plasmodium, where the vein structures were being destroyed. Thus, the Physarum plasmodium exhibits versatile patterns, which are generally expected in coupled oscillator systems. This paper discusses the physiological roles of spatiotemporal patterns, comparing them with other biological systems.

Clinical utility of T-wave alternans

NASA Technical Reports Server (NTRS)

Armoundas, A. A.; Cohen, R. J.

1997-01-01

Electrical alternans represents a variation in the morphology of electrocardiographic complexes on an every-other-beat basis in an ABABAB... pattern. Apparent electrical alternans associated with pericardial effusion results from rotation of the heart in the pericardial sac, and not true alternation in electrical conduction patterns. In contrast, true electrical alternans results from an alternation in electrical conduction patterns in the heart itself. Repolarization alternans is true electrical alternans associated with the ST segment and T wave of the electrocardiogram (ECG). Here we will focus on T-wave alternans (TWA) and its association with susceptibility to ventricular tachyarrhythmias. Electrical alternans was reported in the literature as early as 1909. Historically, electrical alternans has been regarded as a fairly rare electrocardiographic abnormality. Case reports of electrical alternans have been associated with a variety of disease states, including acute ischemia, Prinzmetal's angina, a variety of electrolyte abnormalities, and the long QT syndrome. Interestingly, patients born with the prolonged QT syndrome have a very high incidence of sudden cardiac death at an early age. Schwartz and Malliani showed that patients with the prolonged QT syndrome who do not demonstrate alternans at rest, may evidence alternans during stress such as emotional excitement. Thus, over the years electrical alternans has been associated anecdotally with conditions associated with an increased risk of ventricular arrhythmias. In 1948, Kalter reviewed the world literature on electrical alternans and found a total of 41 reported cases. In addition, he reviewed clinical ectrocardiograms from 6059 patients and found five new cases (incidence of less than 1 in 1000 patients). Interestingly, he found a very high mortality, 62%, associated with this condition. Despite the clinical associations reported in the literature, the consensus view of electrical alternans until recent years has been that alternans is an electrocardiographic curiosity rarely encountered in clinical practice which, when identified, does not have specific clinical significance.

Internal Waves and Wave Attractors in Enceladus' Subsurface Ocean

NASA Astrophysics Data System (ADS)

van Oers, A. M.; Maas, L. R.; Vermeersen, B. L. A.

2016-12-01

One of the most peculiar features on Saturn moon Enceladus is its so-called tiger stripe pattern at the geologically active South Polar Terrain (SPT), as first observed in detail by the Cassini spacecraft early 2005. It is generally assumed that the four almost parallel surface lines that constitute this pattern are faults in the icy surface overlying a confined salty water reservoir. In 2013, we formulated the original idea [Vermeersen et al., AGU Fall Meeting 2013, abstract #P53B-1848] that the tiger stripe pattern is formed and maintained by induced, tidally and rotationally driven, wave-attractor motions in the ocean underneath the icy surface of the tiger-stripe region. Such wave-attractor motions are observed in water tank experiments in laboratories on Earth and in numerical experiments [Maas et al., Nature, 338, 557-561, 1997; Drijfhout and Maas, J. Phys. Oceanogr., 37, 2740-2763, 2007; Hazewinkel et al., Phys. Fluids, 22, 107102, 2010]. Numerical simulations show the persistence of wave attractors for a range of ocean shapes and stratifications. The intensification of the wave field near the location of the surface reflections of wave attractors has been numerically and experimentally confirmed. We measured the forces a wave attractor exerts on a solid surface, near a reflection point. These reflection points would correspond to the location of the tiger stripes. Combining experiments and numerical simulations we conclude that (1) wave attractors can exist in Enceladus' subsurface sea, (2) their shape can be matched to the tiger stripes, (3) the wave attractors cause a localized force at the water-ice boundaries, (4) this force could have been large enough to contribute to fracturing the ice and (5) the wave attractors localize energy (and particles) and cause dissipation along its path, helping explain Enceladus' enigmatic heat output at the tiger stripes.

Characterization of rotary-percussion drilling as a seismic-while-drilling source

NASA Astrophysics Data System (ADS)

Xiao, Yingjian; Hurich, Charles; Butt, Stephen D.

2018-04-01

This paper focuses on an evaluation of rotary-percussion drilling (RPD) as a seismic source. Two field experiments were conducted to characterize seismic sources from different rocks with different strengths, i.e. weak shale and hard arkose. Characterization of RPD sources consist of spectral analysis and mean power measurements, along with field measurements of the source radiation patterns. Spectral analysis shows that increase of rock strength increases peak frequency and widens bandwidth, which makes harder rock more viable for seismic-while-drilling purposes. Mean power analysis infers higher magnitude of body waves in RPD than in conventional drillings. Within the horizontal plane, the observed P-wave energy radiation pattern partially confirms the theoretical radiation pattern under a single vertical bit vibration. However a horizontal lobe of energy is observed close to orthogonal to the axial bit vibration. From analysis, this lobe is attributed to lateral bit vibration, which is not documented elsewhere during RPD. Within the horizontal plane, the observed radiation pattern of P-waves is generally consistent with a spherically-symmetric distribution of energy. In addition, polarization analysis is conducted on P-waves recorded at surface geophones for understanding the particle motions. P-wave particle motions are predominantly in the vertical direction showing the interference of the free-surface.

Simulation of pattern and defect detection in periodic amplitude and phase structures using photorefractive four-wave mixing

NASA Astrophysics Data System (ADS)

Nehmetallah, Georges; Banerjee, Partha; Khoury, Jed

2015-03-01

The nonlinearity inherent in four-wave mixing in photorefractive (PR) materials is used for adaptive filtering. Examples include script enhancement on a periodic pattern, scratch and defect cluster enhancement, periodic pattern dislocation enhancement, etc. through intensity filtering image manipulation. Organic PR materials have large space-bandwidth product, which makes them useful in adaptive filtering techniques in quality control systems. For instance, in the case of edge enhancement, phase conjugation via four-wave mixing suppresses the low spatial frequencies of the Fourier spectrum of an aperiodic image and consequently leads to image edge enhancement. In this work, we model, numerically verify, and simulate the performance of a four wave mixing setup used for edge, defect and pattern detection in periodic amplitude and phase structures. The results show that this technique successfully detects the slightest defects clearly even with no enhancement. This technique should facilitate improvements in applications such as image display sharpness utilizing edge enhancement, production line defect inspection of fabrics, textiles, e-beam lithography masks, surface inspection, and materials characterization.

Rogue waves in terms of multi-point statistics and nonequilibrium thermodynamics

NASA Astrophysics Data System (ADS)

Hadjihosseini, Ali; Lind, Pedro; Mori, Nobuhito; Hoffmann, Norbert P.; Peinke, Joachim

2017-04-01

Ocean waves, which lead to rogue waves, are investigated on the background of complex systems. In contrast to deterministic approaches based on the nonlinear Schroedinger equation or focusing effects, we analyze this system in terms of a noisy stochastic system. In particular we present a statistical method that maps the complexity of multi-point data into the statistics of hierarchically ordered height increments for different time scales. We show that the stochastic cascade process with Markov properties is governed by a Fokker-Planck equation. Conditional probabilities as well as the Fokker-Planck equation itself can be estimated directly from the available observational data. This stochastic description enables us to show several new aspects of wave states. Surrogate data sets can in turn be generated allowing to work out different statistical features of the complex sea state in general and extreme rogue wave events in particular. The results also open up new perspectives for forecasting the occurrence probability of extreme rogue wave events, and even for forecasting the occurrence of individual rogue waves based on precursory dynamics. As a new outlook the ocean wave states will be considered in terms of nonequilibrium thermodynamics, for which the entropy production of different wave heights will be considered. We show evidence that rogue waves are characterized by negative entropy production. The statistics of the entropy production can be used to distinguish different wave states.

Geomorphology of unique reefs on the western Canadian shelf: sponge reefs mapped by multibeam bathymetry

NASA Astrophysics Data System (ADS)

Conway, Kim W.; Barrie, J. Vaughn; Krautter, Manfred

2005-09-01

Multibeam imagery of siliceous sponge reefs (Hexactinellida, Hexactinosida) reveals the setting, form, and organization of five reef complexes on the western Canadian continental shelf. The reefs are built by framework skeleton sponges which trap clay-rich sediments resulting in a distinctive pattern of low intensity backscatter from the reefs that colonize more reflective glacial sediments of higher backscatter intensity. Bathymetry and backscatter maps show the distribution and form of reefs in two large complexes in the Queen Charlotte Basin (QCB) covering hundreds of km2, and three smaller reef complexes in the Georgia Basin (GB). Ridges up to 7 km long and 21 m in height, together with diversely shaped, coalescing bioherms and biostromes form the principal reef shape in the QCB whereas chains of wave-form, streamlined mounds up to 14 m in height have developed in the GB. Reef initiation is dependent on the distribution of high backscatter-intensity relict glacial surfaces, and the variation in reef complex morphology is probably the result of tidally driven, near seabed currents.