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Sample records for composite gre sites

  1. A rapid interference between glucocorticoids and cAMP-activated signalling in hypothalamic neurones prevents binding of phosphorylated cAMP response element binding protein and glucocorticoid receptor at the CRE-Like and composite GRE sites of thyrotrophin-releasing hormone gene promoter.

    PubMed

    Díaz-Gallardo, M Y; Cote-Vélez, A; Charli, J L; Joseph-Bravo, P

    2010-04-01

    Glucocorticoids or cAMP increase, within minutes, thyrotrophin-releasing hormone (TRH) transcription in hypothalamic primary cultures, although this effect is prevented if cells are simultaneously incubated with both drugs. Rat TRH promoter contains a CRE site at -101/-94 bp and a composite GRE element (cGRE) at -218/-197 bp. Nuclear extracts of hypothalamic cells incubated with 8Br-cAMP or dexamethasone, and not their combination, bind to oligonucleotides containing the CRE or cGRE sequences. Adjacent to CRE are Sp/Krüppel response elements, and flanking the GRE half site, two AP1 binding sites. The present study aimed to identify the hypothalamic transcription factors that bind to these sites. We verified that the effects of glucocorticoid were not mimicked by corticosterone-bovine serum albumin. Footprinting and chromatin immunoprecipitation (ChIP) assays were used to examine the interaction of cAMP- and glucocorticoid-mediated regulation of TRH transcription at the CRE and cGRE regions of the TRH promoter. Nuclear extracts from hypothalamic cells incubated for 1 h with cAMP or glucocorticoids protected CRE. The GRE half site was recognised by nuclear proteins from cells stimulated with glucocorticoids and, for the adjacent AP-1 sites, by nuclear proteins from cells stimulated with cAMP or phorbol esters. Protection of CRE or cGRE was lost if cells were coincubated with dexamethasone and 8Br-cAMP. ChIP assays revealed phospho-CREB, c-Jun, Sp1, c-Fos and GR antibodies bound the TRH promoter of cells treated with cAMP or glucocorticoids; anti:RNA-polymerase II immunoprecipitated TRH promoter in a similar proportion as anti:pCREB or anti:GR. Recruitment of pCREB, SP1 or GR was lost when cells were exposed simultaneously to 8Br-cAMP and glucocorticoids. The data show that while pCREB and Sp1 bind to CRE-2, or GR to cGRE of the TRH promoter, the mutual antagonism between cAMP and glucocorticoid signalling, which prevent their binding to TRH promoter, could serve as

  2. Effect of Hydrothermal immersion and Hygrothermal Conditioning on Mechanical Properties of GRE Composite

    NASA Astrophysics Data System (ADS)

    Chakraverty, A. P.

    2017-02-01

    Glass fibre reinforced epoxy (GRE) composite meet several degrading agents like moisture and temperature while its use in real time applications in civil infrastructures. Keeping this in mind, the short beam shear (SBS) specimens of GRE composite were exposed to such laboratory created stringent environment as a combination of moisture and elevated temperature for several periods. The environments are as: immersion in distilled water coupled with 65oC as hydrothermal conditioning and an ambience containing 95% relative humidity at 60oC as hygrothermal conditioning. Moisture treated SBS specimens were subjected to 3-point bend test to reveal inter laminar shear strength (ILSS), stress/strain at rupture and modulus values with periods of exposures. The concerned sample suffered 23% of degradation in ILSS values after 120 days of hydrothermal immersion and 25% after 90 days of hygrothermal conditioning. Samples at some optimum exposing conditions of both the exposures are thermally characterized by adopting differential scanning calorimetry (DSC) test. Glass transition temperature (Tg) of such representing samples were determined from the DSC thermograms. About 8 % reduction in Tg values was observed for the GRE composite sample, expectedly, due to moisture induced matrix plasticization and swelling. The fractographs as obtained through scanning electron microscope (SEM) revealed some causes of failures indicating the prime modes of failure of the treated GRE samples with optimum duration of both the exposures.

  3. Beyond the GRE: using a composite score to predict 
the success of Puerto Rican students in a biomedical 
PhD program.

    PubMed

    Pacheco, Wendy I; Noel, Richard J; Porter, James T; Appleyard, Caroline B

    2015-01-01

    The use and validity of the Graduate Record Examination General Test (GRE) to predict the success of graduate school applicants is heavily debated, especially for its possible impact on the selection of underrepresented minorities into science, technology, engineering, and math fields. To better identify candidates who would succeed in our program with less reliance on the GRE and grade point average (GPA), we developed and tested a composite score (CS) that incorporates additional measurable predictors of success to evaluate incoming applicants. Uniform numerical values were assigned to GPA, GRE, research experience, advanced course work or degrees, presentations, and publications. We compared the CS of our students with their achievement of program goals and graduate school outcomes. The average CS was significantly higher in those students completing the graduate program versus dropouts (p < 0.002) and correlated with success in competing for fellowships and a shorter time to thesis defense. In contrast, these outcomes were not predicted by GPA, science GPA, or GRE. Recent implementation of an impromptu writing assessment during the interview suggests the CS can be improved further. We conclude that the CS provides a broader quantitative measure that better predicts success of students in our program and allows improved evaluation and selection of the most promising candidates.

  4. Beyond the GRE: Using a Composite Score to Predict the Success of Puerto Rican Students in a Biomedical PhD Program

    ERIC Educational Resources Information Center

    Pacheco, Wendy I.; Noel, Richard J., Jr.; Porter, James T.; Appleyard, Caroline B.

    2015-01-01

    The use and validity of the Graduate Record Examination General Test (GRE) to predict the success of graduate school applicants is heavily debated, especially for its possible impact on the selection of underrepresented minorities into science, technology, engineering, and math fields. To better identify candidates who would succeed in our program…

  5. Conserved functions of the trigger loop and Gre factors in RNA cleavage by bacterial RNA polymerases.

    PubMed

    Miropolskaya, Nataliya; Esyunina, Daria; Kulbachinskiy, Andrey

    2017-02-27

    RNA cleavage by RNA polymerase (RNAP) is the central step in co-transcriptional RNA proofreading. Bacterial RNAPs were proposed to rely on the same mobile element of the active site, the trigger loop (TL), for both nucleotide addition and RNA cleavage. RNA cleavage can also be stimulated by universal Gre factors, which should replace the TL to get access to the RNAP active site. The contributions of the TL and Gre factors to RNA cleavage reportedly vary between RNAPs from different bacterial species and, probably, different types of transcription complexes. Here, by comparing RNAPs from Escherichia coli (Eco), Deinococcus radiodurans (Dra) and Thermus aquaticus (Taq) we show that the functions of the TL and Gre factors in RNA cleavage are conserved in various species, with important variations which may be related to extremophilic adaptation. Deletions of the TL strongly impair intrinsic RNA cleavage by all three RNAPs and eliminate the inter-species differences in the reaction rates. GreA factors activate RNA cleavage by wild-type RNAPs to similar levels. The rates of GreA-dependent cleavage are lower for ΔTL RNAP variants, suggesting that the TL contributes to the Gre function. Finally, neither the TL nor GreA can efficiently activate RNA cleavage in certain types of backtracked transcription complexes suggesting that these complexes adopt a catalytically inactive conformation probably important for transcription regulation.

  6. Background, Purpose, and Scope of the GRE Board Research Program.

    ERIC Educational Resources Information Center

    Crawford, Bryce, Jr.

    The GRE Board established the Research Program to investigate ways to improve the GRE and its overall operation. Approximately 30 projects have been undertaken and funded by the GRE Board; perhaps a third of these have been completed. These projects can be divided into three groups: (1) those dealing with product or process or marketing…

  7. Physics GRE Scores of Prize Postdoctoral Fellows in Astronomy

    NASA Astrophysics Data System (ADS)

    Levesque, Emily M.; Bezanson, Rachel; Tremblay, Grant

    2017-01-01

    The Physics GRE has long been a required element of the graduate admissions process in many U.S. astronomy programs; however, its predictive power and utility as a means of selection "successful" applicants had not been quantitatively examined until recently. In the fall of 2015 we circulated a short questionnaire to 271 people who have held U.S. prize postdoctoral fellowships in astrophysics between 2010-2015, asking them to report their Physics GRE scores. The response rate was 64%, and the responding sample was unbiased with respect to the overall gender distribution of prize fellows. The responses revealed that the Physics GRE scores of prize fellows do not adhere to any minimum percentile score and show no statistically significant correlation with the number of first author papers published. As an example, a Physics GRE percentile cutoff of 60% would have eliminated 44% of 2010-2015 U.S. prize postdoctoral fellows, including 60% of the female fellows. From these data, we found no evidence that the Physics GRE could be used as an effective predictor of "success" either in or beyond graduate school. Following this work and last year's official recommendation from the AAS, several astronomy departments have recently decided to eliminate the Physics GRE as a requirement for graduate applicants.

  8. Highly inducible expression from vectors containing multiple GRE's in CHO cells overexpressing the glucocorticoid receptor.

    PubMed Central

    Israel, D I; Kaufman, R J

    1989-01-01

    A conditional glucocorticoid-responsive expression vector system is described for highly inducible expression of heterologous genes in mammalian cells. This host-vector system requires high level expression of the glucocorticoid receptor (GR) protein in the host cell and multiple copies of the receptor binding site within the expression vector. Transfection and selection of Chinese hamster ovary cells with expression vectors encoding the rat GR yielded cell lines which express functional receptor at high levels. Insertion of multiple copies of the MMTV enhancer (glucocorticoid responsive element, GRE) into an Adenovirus major late promoter (AdMLP) based expression vector yielded greater than 1000-fold inducible expression by dexamethasone (dex) in transient DNA transfection assays. The induced expression level was 7-fold greater than that obtained with an AdMLP based vector containing an SV40 enhancer, but lacking GRE's. Vectors containing the SV40 enhancer in combination with multiple GRE's exhibited elevated basal expression in the absence of dex, but retained inducibility in both transient assays and after integration and amplification in the CHO genome. This expression system should be of general utility for studying gene regulation and for expressing heterologous genes in a regulatable fashion. Images PMID:2546123

  9. The GRE and the Minority Student: A Perspective.

    ERIC Educational Resources Information Center

    Nieves, Luis

    Alternate admission systems are reviewed in respect to the minority applicant in an attempt to assess the nature of the bias frequently referred to in connection with standardized testing. The connection between the use of the Graduate Record Examinations (GRE) as a standardized test and the admission system was explored, concluding that the role…

  10. Using Minimum Acceptable GRE Scores for Graduate Admissions Suppresses Diversity

    NASA Astrophysics Data System (ADS)

    Miller, Casey

    2014-01-01

    I will present data showing that significant performance disparities on the GRE general test exist based on the test taker's race and gender [1]. Because of the belief that high GRE scores qualify one for graduate studies, the diversity issues faced by STEM fields may originate, at least in part, in misuse of the GRE scores by graduate admissions committees. I will quantitatively demonstrate this by showing that the combination of a hard cut-off and the different score distributions leads to the systematic underrepresentation of certain groups. I will present data from USF’s PhD program that shows a lack of correlation between GRE scores and research ability; similar null results are emerging from numerous other programs. I will then discuss how assessing non-cognitive competencies in the selection process may lead to a more enlightened search for the next generation of scientists. [1] C. W. Miller, "Admissions Criteria and Diversity in Graduate School", APS News Vol 22, Issue 2, The Back Page (2013) http://www.aps.org/publications/apsnews/201302/backpage.cfm

  11. Documentation of GRE Talent Flow Data Base--1978 to 1987. GRE Board Professional Report No. 91-19P.

    ERIC Educational Resources Information Center

    Robertson, Nancy J.

    The project described was an outgrowth of a recently completed study on the establishment of a data base of Graduate Record Examinations (GRE) for studying talent flow. Both examinee-level and matrix data files created and analyzed under the original project were rearranged to make them more accessible to researchers. These multiyear files…

  12. GRE requirements and student perceptions of fictitious clinical psychology graduate programs.

    PubMed

    Atwood, Karen L; Manago, Adriana M; Rogers, Ronald F

    2011-04-01

    The influence of Graduate Record Examination (GRE) requirements on undergraduate students' perceptions of a fictitious clinical psychology graduate program was examined. The more rigorous a program's GRE requirement, the more highly students were expected to rate the program on quality, reputation, challenge of curriculum, attractiveness, and their willingness to apply. 140 undergraduate participants read and rated one of three possible program descriptions that differed only with regard to the stated GRE requirements. Although the effects were small, participants rated the program requiring a minimum combined GRE score of 1,200 (verbal and quantitative) as higher in quality and as having a more challenging curriculum compared to the program that required the GRE but with no minimum score. Although preliminary, these findings are consistent with previous research demonstrating that graduate school applicants use GRE requirements in their evaluation of graduate programs.

  13. Gasoline Composition Regulations Affecting LUST Sites

    EPA Science Inventory

    Passage of the Clean Air Act Amendments in 1990 imposed requirements on gasoline composition in the United States. Impacts to ground water are affected by the provisions that required oxygenated additives and limited benzene concentration. Reformulated and oxygenated gasoline w...

  14. The GRE and the GMAT: A Comparison of Their Correlations to GGPA.

    ERIC Educational Resources Information Center

    Nilsson, Johanna E.

    1995-01-01

    Predictive relationships between the scores of the Graduate Record Examinations (GRE) and graduate grade point average (GGPA) and the scores of the Graduate Management Admission Test (GMAT) and GGPA were studied for 60 college students. The GRE had a stronger correlation to GGPA than the GMAT. (SLD)

  15. A GRE Test for the STEM Disciplines: Developing an Assessment "of" and "for" Learning

    ERIC Educational Resources Information Center

    Payne, David G.; Briel, Jacqueline B.; Hawthorn, John; Riedeburg, Karen

    2006-01-01

    Plans are described for creating a Graduate Record Examination (GRE) test for the STEM (science, technology, engineering, and mathematics) disciplines. Previous work showed that a quantitative measure for the STEM disciplines exacerbated group differences beyond those reflected in the current GRE General Test. A test development approach is…

  16. Alcohol dysregulates corticotropin-releasing-hormone (CRH) promoter activity by interfering with the negative glucocorticoid response element (nGRE).

    PubMed

    Przybycien-Szymanska, Magdalena M; Mott, Natasha N; Pak, Toni R

    2011-01-01

    EtOH exposure in male rats increases corticotropin-releasing hormone (CRH) mRNA in the paraventricular nucleus of the hypothalamus (PVN), a brain region responsible for coordinating stress and anxiety responses. In this study we identified the molecular mechanisms involved in mediating these effects by examining the direct effects of EtOH on CRH promoter activity in a neuronal cell line derived from the PVN (IVB). In addition, we investigated the potential interactions of EtOH and glucocorticoids on the CRH promoter by concomitantly treating cells with EtOH and the glucocorticoid receptor (GR) antagonist RU486, and by sequentially deleting GR binding sites within glucocorticoid response element (GRE) on the CRH promoter. Cells were transiently transfected with a firefly luciferase reporter construct containing 2.5 kb of the rat wild type (WT) or mutated CRH promoter. Our results showed that EtOH treatment induced a biphasic response in CRH promoter activity. EtOH exposure for 0.5 h significantly decreased promoter activity compared to vehicle treated controls, whereas promoter activity was significantly increased after 2.0 h of EtOH exposure. Treatment with RU486, or deletion of the GR binding sites 1 and 2 within the GRE, abolished the EtOH-induced increase in the promoter activity, however did not affect EtOH-induced decrease in CRH promoter activity at an earlier time point. Overall, our data suggest that alcohol exposure directly regulates CRH promoter activity by interfering with the normal feedback mechanisms of glucocorticoids mediated by GR signaling at the GRE site of the CRH promoter.

  17. Response Element Composition Governs Correlations between Binding Site Affinity and Transcription in Glucocorticoid Receptor Feed-forward Loops.

    PubMed

    Sasse, Sarah K; Zuo, Zheng; Kadiyala, Vineela; Zhang, Liyang; Pufall, Miles A; Jain, Mukesh K; Phang, Tzu L; Stormo, Gary D; Gerber, Anthony N

    2015-08-07

    Combinatorial gene regulation through feed-forward loops (FFLs) can bestow specificity and temporal control to client gene expression; however, characteristics of binding sites that mediate these effects are not established. We previously showed that the glucocorticoid receptor (GR) and KLF15 form coherent FFLs that cooperatively induce targets such as the amino acid-metabolizing enzymes AASS and PRODH and incoherent FFLs exemplified by repression of MT2A by KLF15. Here, we demonstrate that GR and KLF15 physically interact and identify low affinity GR binding sites within glucocorticoid response elements (GREs) for PRODH and AASS that contribute to combinatorial regulation with KLF15. We used deep sequencing and electrophoretic mobility shift assays to derive in vitro GR binding affinities across sequence space. We applied these data to show that AASS GRE activity correlated (r(2) = 0.73) with predicted GR binding affinities across a 50-fold affinity range in transfection assays; however, the slope of the linear relationship more than doubled when KLF15 was expressed. Whereas activity of the MT2A GRE was even more strongly (r(2) = 0.89) correlated with GR binding site affinity, the slope of the linear relationship was sharply reduced by KLF15, consistent with incoherent FFL logic. Thus, GRE architecture and co-regulator expression together determine the functional parameters that relate GR binding site affinity to hormone-induced transcriptional responses. Utilization of specific affinity response functions and GR binding sites by FFLs may contribute to the diversity of gene expression patterns within GR-regulated transcriptomes.

  18. The Limitations of the GRE in Predicting Success in Biomedical Graduate School.

    PubMed

    Moneta-Koehler, Liane; Brown, Abigail M; Petrie, Kimberly A; Evans, Brent J; Chalkley, Roger

    2017-01-01

    Historically, admissions committees for biomedical Ph.D. programs have heavily weighed GRE scores when considering applications for admission. The predictive validity of GRE scores on graduate student success is unclear, and there have been no recent investigations specifically on the relationship between general GRE scores and graduate student success in biomedical research. Data from Vanderbilt University Medical School's biomedical umbrella program were used to test to what extent GRE scores can predict outcomes in graduate school training when controlling for other admissions information. Overall, the GRE did not prove useful in predicating who will graduate with a Ph.D., pass the qualifying exam, have a shorter time to defense, deliver more conference presentations, publish more first author papers, or obtain an individual grant or fellowship. GRE scores were found to be moderate predictors of first semester grades, and weak to moderate predictors of graduate GPA and some elements of a faculty evaluation. These findings suggest admissions committees of biomedical doctoral programs should consider minimizing their reliance on GRE scores to predict the important measures of progress in the program and student productivity.

  19. The Limitations of the GRE in Predicting Success in Biomedical Graduate School

    PubMed Central

    Moneta-Koehler, Liane; Brown, Abigail M.; Petrie, Kimberly A.; Evans, Brent J.; Chalkley, Roger

    2017-01-01

    Historically, admissions committees for biomedical Ph.D. programs have heavily weighed GRE scores when considering applications for admission. The predictive validity of GRE scores on graduate student success is unclear, and there have been no recent investigations specifically on the relationship between general GRE scores and graduate student success in biomedical research. Data from Vanderbilt University Medical School’s biomedical umbrella program were used to test to what extent GRE scores can predict outcomes in graduate school training when controlling for other admissions information. Overall, the GRE did not prove useful in predicating who will graduate with a Ph.D., pass the qualifying exam, have a shorter time to defense, deliver more conference presentations, publish more first author papers, or obtain an individual grant or fellowship. GRE scores were found to be moderate predictors of first semester grades, and weak to moderate predictors of graduate GPA and some elements of a faculty evaluation. These findings suggest admissions committees of biomedical doctoral programs should consider minimizing their reliance on GRE scores to predict the important measures of progress in the program and student productivity. PMID:28076356

  20. Site-specific group selection drives locally adapted group compositions.

    PubMed

    Pruitt, Jonathan N; Goodnight, Charles J

    2014-10-16

    Group selection may be defined as selection caused by the differential extinction or proliferation of groups. The socially polymorphic spider Anelosimus studiosus exhibits a behavioural polymorphism in which females exhibit either a 'docile' or 'aggressive' behavioural phenotype. Natural colonies are composed of a mixture of related docile and aggressive individuals, and populations differ in colonies' characteristic docile:aggressive ratios. Using experimentally constructed colonies of known composition, here we demonstrate that population-level divergence in docile:aggressive ratios is driven by site-specific selection at the group level--certain ratios yield high survivorship at some sites but not others. Our data also indicate that colonies responded to the risk of extinction: perturbed colonies tended to adjust their composition over two generations to match the ratio characteristic of their native site, thus promoting their long-term survival in their natal habitat. However, colonies of displaced individuals continued to shift their compositions towards mixtures that would have promoted their survival had they remained at their home sites, regardless of their contemporary environment. Thus, the regulatory mechanisms that colonies use to adjust their composition appear to be locally adapted. Our data provide experimental evidence of group selection driving collective traits in wild populations.

  1. Coma chemical composition at the Abydos landing site

    NASA Astrophysics Data System (ADS)

    Morse, A.; Sheridan, S.; Morgan, G.; Andrews, D.; Barber, S.; Wright, I.

    2015-10-01

    The Ptolemy instrument, onboard the Rosetta Philae Lander, made measurements of the chemical composition of the coma mid-bounce, just after the non-nominal landing on the surface, and subsequently at the Abydos landing site. This presentation will discuss Ptolemy's operations throughout this 45 hour period and the results obtained.

  2. Photocopy: Composite Map of Crossing Site by Daniel J. Mordell ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Photocopy: Composite Map of Crossing Site by Daniel J. Mordell from Canal Society of New York State. Bottoming Out: Useful and Interesting Notes Collected for Members of the Canal Society of New York State. Vol. 18-19. Syracuse, 1962. - Erie Canal (Enlarged), Schoharie Creek Aqueduct, Spanning Schoharie Creek, Fort Hunter, Montgomery County, NY

  3. GRE T2∗-Weighted MRI: Principles and Clinical Applications

    PubMed Central

    Tang, Meng Yue; Chen, Tian Wu; Zhang, Xiao Ming; Huang, Xiao Hua

    2014-01-01

    The sequence of a multiecho gradient recalled echo (GRE) T2*-weighted imaging (T2*WI) is a relatively new magnetic resonance imaging (MRI) technique. In contrast to T2 relaxation, which acquires a spin echo signal, T2* relaxation acquires a gradient echo signal. The sequence of a GRE T2*WI requires high uniformity of the magnetic field. GRE T2*WI can detect the smallest changes in uniformity in the magnetic field and can improve the rate of small lesion detection. In addition, the T2* value can indirectly reflect changes in tissue biochemical components. Moreover, it can be used for the early diagnosis and quantitative diagnosis of some diseases. This paper reviews the principles and clinical applications as well as the advantages and disadvantages of GRE T2*WI. PMID:24987676

  4. Fitting New Measurement Models to GRE General Test Constructed-Response Item Data. GRE Board Professional Report No. 89-11P.

    ERIC Educational Resources Information Center

    Bennett, Randy Elliot; And Others

    This exploratory study applied two new cognitively sensitive measurement models to constructed-response quantitative data. The models, intended to produce qualitative characteristics of examinee performance, were fitted to algebra word problem solutions produced by 285 examinees taking the Graduate Record Examinations (GRE) General Test. The two…

  5. Evidence Suggesting We Should Admit Students Who Score Extremely Low on GRE Subtests or the GMAT to Graduate School Programs

    ERIC Educational Resources Information Center

    Micceri, Ted

    2002-01-01

    This study sought to determine whether GRE subscores (or GMAT) could predict graduation rates in related areas (math-oriented majors for GRE quantitative, etc.) in a sample of over 9,000 graduate students at a major public research university. Because few low quantitative scores were present in math-oriented majors, an attempt was made to…

  6. Examining the Predictive Validity of GRE Scores on Doctoral Education: Students' Success and Methodology Choices in the Dissertation Process

    ERIC Educational Resources Information Center

    Rockinson-Szapkiw, Amanda J.; Bray, Oliver R., Jr.; Spaulding, Lucinda S.

    2014-01-01

    This study examines how GRE scores can be used to better understand Education doctoral candidates' methodology choices for the dissertation as well as their persistence behaviors. Candidates' of one online doctoral education program were examined. Results of a MANOVA suggested that there is no difference in GRE scores based on doctoral candidates'…

  7. Being a binding site: characterizing residue composition of binding sites on proteins.

    PubMed

    Iván, Gábor; Szabadka, Zoltán; Grolmusz, Vince

    2007-12-30

    The Protein Data Bank contains the description of more than 45,000 three-dimensional protein and nucleic-acid structures today. Started to exist as the computer-readable depository of crystallographic data complementing printed articles, the proper interpretation of the content of the individual files in the PDB still frequently needs the detailed information found in the citing publication. This fact implies that the fully automatic processing of the whole PDB is a very hard task. We first cleaned and re-structured the PDB data, then analyzed the residue composition of the binding sites in the whole PDB for frequency and for hidden association rules. Main results of the paper: (i) the cleaning and repairing algorithm (ii) redundancy elimination from the data (iii) application of association rule mining to the cleaned non-redundant data set. We have found numerous significant relations of the residue-composition of the ligand binding sites on protein surfaces, summarized in two figures. One of the classical data-mining methods for exploring implication-rules, the association-rule mining, is capable to find previously unknown residue-set preferences of bind ligands on protein surfaces. Since protein-ligand binding is a key step in enzymatic mechanisms and in drug discovery, these uncovered preferences in the study of more than 19,500 binding sites may help in identifying new binding protein-ligand pairs.

  8. Construct Validity of the GRE Aptitude Test across Populations--An Empirical Confirmatory Study.

    ERIC Educational Resources Information Center

    Rock, D. A.; And Others

    The study evaluated the invariance of the construct validity and thus the interpretation of Graduate Record Examinations (GRE) Aptitude Test scores. A systematic procedure for investigation of test bias from a construct validity frame of reference was developed and applied. Invariant construct validity was defined as similar patterns of loadings…

  9. Content Validity of the GRE Physics Test as Indexed by Commonly Employed Textbooks.

    ERIC Educational Resources Information Center

    Terwilliger, James S.; And Others

    The Graduate Record Examination (GRE) in Physics was analyzed as a specific indicator of learning outcomes in that undergraduate major. Textbooks were selected as a measure of curriculum content. A representative sample of colleges and universities (n=59) responded to questions about physics courses and textbooks and the existence of a graduate…

  10. Rainwater chemical composition at two sites in Central Mexico

    NASA Astrophysics Data System (ADS)

    Báez, A. P.; Belmont, R. D.; García, R. M.; Torres, M. C. B.; Padilla, H. G.

    2006-04-01

    Chemical analyses were performed on rainwater samples collected at the National Autonomous University of Mexico (UNAM) in Mexico City and at a wooded site, Rancho Viejo (RV) in the State of Mexico, for the periods 1994-2000 and 1994-1999, respectively. At UNAM, rainwater was collected for the entire rainy season period each year, while at RV, technical considerations limited collection to weekends only. The results showed large variations in rainwater chemical composition in most years, mainly because of the variability of meteorological conditions and also because of changes in source emissions. Sulfates and NH 4+ showed higher annual volume-weighted mean concentrations (VWMC) in both sites. At UNAM, the maximum annual VWMC for SO 42- occurred in March and the minimum in July and August. Lower concentrations of almost all ions were found at RV; however, the H + concentration was higher at this site. The pH in Mexico City, calculated from the annual VWMC of H +, was 4.95, which is a little higher than pH values reported in some other countries. Despite the fact that sulfate and NO 3- concentrations were lower at RV, the pH was lower. Air-mass back trajectories were calculated for individual concentrations of SO 42-, H +, NH 4+, Ca 2+, and Mg 2+, observed at each sampling site for weekend data. At RV, sulfate concentrations were higher when air-mass back trajectories indicated a wind flow from Mexico City and Toluca at 1000 MAGL (meters above ground level) and 3000 MAGL. The hydrogen ion exhibited the same behavior. Calcium and Mg 2+ concentrations were also higher when the wind blew from urban areas at 1000 and 3000 MAGL. At UNAM, H + concentration was lower and Ca 2+ and Mg 2+ were higher when wind blew from the northern sector of the city at 1000 and 3000 MAGL. In UNAM, the NO 3-/SO 42- and NH 4+/SO 42- ratios were 0.5 and 1.09 in 1994 and 0.86 and 1.64 in 2000, respectively, indicating a decrease in SO 2 emissions resulting from the change of fuel oil to gas

  11. On the Relationship Between Site Geology and the Distribution of Surface Regolith Compositions at the Apollo Sites

    NASA Technical Reports Server (NTRS)

    Korotev, Randy L.

    2000-01-01

    Some considerations are discussed on how information on site geology can be obtained from the distribution of data points on 2-element plots of composition of lunar regolith samples collected along a traverse.

  12. Automated Trait Scores for "GRE"® Writing Tasks. Research Report. ETS RR-15-15

    ERIC Educational Resources Information Center

    Attali, Yigal; Sinharay, Sandip

    2015-01-01

    The "e-rater"® automated essay scoring system is used operationally in the scoring of the argument and issue tasks that form the Analytical Writing measure of the "GRE"® General Test. For each of these tasks, this study explored the value added of reporting 4 trait scores for each of these 2 tasks over the total e-rater score.…

  13. Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae

    PubMed Central

    Yuzenkova, Yulia; Gamba, Pamela; Herber, Martijn; Attaiech, Laetitia; Shafeeq, Sulman; Kuipers, Oscar P.; Klumpp, Stefan; Zenkin, Nikolay; Veening, Jan-Willem

    2014-01-01

    Transcription by RNA polymerase may be interrupted by pauses caused by backtracking or misincorporation that can be resolved by the conserved bacterial Gre-factors. However, the consequences of such pausing in the living cell remain obscure. Here, we developed molecular biology and transcriptome sequencing tools in the human pathogen Streptococcus pneumoniae and provide evidence that transcription elongation is rate-limiting on highly expressed genes. Our results suggest that transcription elongation may be a highly regulated step of gene expression in S. pneumoniae. Regulation is accomplished via long-living elongation pauses and their resolution by elongation factor GreA. Interestingly, mathematical modeling indicates that long-living pauses cause queuing of RNA polymerases, which results in ‘transcription traffic jams’ on the gene and thus blocks its expression. Together, our results suggest that long-living pauses and RNA polymerase queues caused by them are a major problem on highly expressed genes and are detrimental for cell viability. The major and possibly sole function of GreA in S. pneumoniae is to prevent formation of backtracked elongation complexes. PMID:25190458

  14. Composition of beer by 1H NMR spectroscopy: effects of brewing site and date of production.

    PubMed

    Almeida, Cláudia; Duarte, Iola F; Barros, António; Rodrigues, João; Spraul, Manfred; Gil, Ana M

    2006-02-08

    A principal component analysis (PCA) of 1H NMR spectra of beers differing in production site (A, B, C) and date is described, to obtain information about composition variability. First, lactic and pyruvic acids contents were found to vary significantly between production sites, good reproducibility between dates being found for site A but not for sites B and C beers. Second, site B beers were clearly distinguished by the predominance of linear dextrins, while A and C beers were richer in branched dextrins. Carbohydrate reproducibility between dates is poorer for site C with dextrin branching degree varying significantly. Finally, all production sites were successfully distinguished by their contents in adenosine/inosine, uridine, tyrosine/tyrosol, and 2-phenylethanol, reproducibility between dates being again poorer for site C. Interpretation of the above compositional differences is discussed in terms of the biochemistry taking place during brewing, and possible applications of the method in brewing process control are envisaged.

  15. Measurements of fog composition at a rural site

    NASA Astrophysics Data System (ADS)

    Straub, Derek J.; Hutchings, James W.; Herckes, Pierre

    2012-02-01

    Studies that focus on fog chemistry in the United States have been limited to relatively few locations. Apart from measurements along the East and West coasts and extensive analysis of radiation fog in the Central Valley of California, fog composition has been characterized in only a handful of other locations. To complement and expand the existing fog chemistry data that are currently available, a new field campaign was established at a rural location in Central Pennsylvania to produce a unique, long term record of fog composition. From 2007 to 2010, 41 fog events were sampled with an automated Caltech Heated Rod Cloudwater Collector (CHRCC). The collected samples were analyzed primarily for pH and major inorganic ions. Dissolved organic carbon (DOC) and trace metals were analyzed in selected samples and N-nitrosodimethylamine (NDMA) was quantified in two samples. Sample composition varied widely during the study period. Sulfate concentrations ranged from 15 to 955 (median = 123) μN and pH varied between 3.08 and 7.41 (median = 5.77). In terms of volume weighted averages, ammonium was the most abundant ionic species followed by sulfate, calcium, and nitrate. For the subset of samples in which DOC was analyzed, concentrations ranged from 2.2 to 22.6 mgC l -1. Comparisons with regional precipitation chemistry measurements reveal the influence of local agricultural and soil sources on fog composition. The sum of sulfate, nitrate, and ammonium measured in the present study is considerably lower than the majority of radiation, precipitation, and coastal fogs collected in the United States although the ammonium/(nitrate + sulfate) ratio is similar to those found in the Central Valley of California.

  16. GRE2 from Scheffersomyces stipitis as an aldehyde reductase contributes tolerance to aldehyde inhibitors derived from lignocellulosic biomass.

    PubMed

    Wang, Xu; Ma, Menggen; Liu, Z Lewis; Xiang, Quanju; Li, Xi; Liu, Na; Zhang, Xiaoping

    2016-08-01

    Scheffersomyces (Pichia) stipitis is one of the most promising yeasts for industrial bioethanol production from lignocellulosic biomass. S. stipitis is able to in situ detoxify aldehyde inhibitors (such as furfural and 5-hydroxymethylfurfural (HMF)) to less toxic corresponding alcohols. However, the reduction enzymes involved in this reaction remain largely unknown. In this study, we reported that an uncharacterized open reading frame PICST_72153 (putative GRE2) from S. stipitis was highly induced in response to furfural and HMF stresses. Overexpression of this gene in Saccharomyces cerevisiae improved yeast tolerance to furfural and HMF. GRE2 was identified as an aldehyde reductase which can reduce furfural to FM with either NADH or NADPH as the co-factor and reduce HMF to FDM with NADPH as the co-factor. This enzyme can also reduce multiple aldehydes to their corresponding alcohols. Amino acid sequence analysis indicated that it is a member of the subclass "intermediate" of the short-chain dehydrogenase/reductase (SDR) superfamily. Although GRE2 from S. stipitis is similar to GRE2 from S. cerevisiae in a three-dimensional structure, some differences were predicted. GRE2 from S. stipitis forms loops at D133-E137 and T143-N145 locations with two α-helices at E154-K157 and E252-A254 locations, different GRE2 from S. cerevisiae with an α-helix at D133-E137 and a β-sheet at T143-N145 locations, and two loops at E154-K157 and E252-A254 locations. This research provided guidelines for the study of other SDR enzymes from S. stipitis and other yeasts on tolerant mechanisms to aldehyde inhibitors derived from lignocellulosic biomass.

  17. The Grenoble Analysis Toolkit (GreAT)-A statistical analysis framework

    NASA Astrophysics Data System (ADS)

    Putze, A.; Derome, L.

    2014-12-01

    The field of astroparticle physics is currently the focus of prolific scientific activity. In the last decade, this field has undergone significant developments thanks to several experimental results from CREAM, PAMELA, Fermi, and H.E.S.S. Moreover, the next generation of instruments, such as AMS-02 (launched on 16 May 2011) and CTA, will undoubtedly facilitate more sensitive and precise measurements of the cosmic-ray and γ-ray fluxes. To fully exploit the wealth of high precision data generated by these experiments, robust and efficient statistical tools such as Markov Chain Monte Carlo algorithms or evolutionary algorithms, able to handle the complexity of joint parameter spaces and datasets, are necessary for a phenomenological interpretation. The Grenoble Analysis Toolkit (GreAT) is an user-friendly and modular object orientated framework in C++, which samples the user-defined parameter space with a pre- or user-defined algorithm. The functionality of GreAT is presented in the context of cosmic-ray physics, where the boron-to-carbon (B/C) ratio is used to constrain cosmic-ray propagation models.

  18. Atomic level understanding of site-specific interactions in Polyaniline/TiO2 composite

    NASA Astrophysics Data System (ADS)

    Chabungbam, Satyananda; Loh, G. C.; Sahariah, Munima B.; Pal, Arup R.; Pandey, Ravindra

    2016-02-01

    Spin-polarized density functional theory calculations have been performed to understand the interactions in polyaniline (PAni) and TiO2 composite at the atomic level. Binding energy calculation shows that composite structure is energetically more stable when Ti atom of TiO2 sits on top of PAni. It is also found that there is a dependency of the CBM on the site of TiO2 interaction in this composite system. The results suggest that optimization of the synthesis parameters at atomic level can be an effective way to improve the performance of a photovoltaic device based on PAni-TiO2 composite.

  19. The Performance of Native Speakers of English and ESL Speakers on the Computer-based TOEFL and GRE General Test

    ERIC Educational Resources Information Center

    Stricker, L. J.

    2004-01-01

    The purpose of this study was to replicate previous research on the construct validity of the paper-based version of the TOEFL and extend it to the computer-based TOEFL. Two samples of Graduate Record Examination (GRE) General Test-takers were used: native speakers of English specially recruited to take the computer-based TOEFL, and ESL…

  20. The ongoing development of TEPEE/GReAT experiment to test the Equivalence Principle

    NASA Astrophysics Data System (ADS)

    Iafolla, Valerio; Peron, Roberto; Iafolla, Valerio; Fiorenza, Emiliano; Glashow, Sheldon; Lefevre, Carlo; Lorenzini, Enrico C.; Lucchesi, David; Magnafico, Carmelo; Nozzoli, Sergio; Peron, Roberto; Reale, Andrea; Ricotta, Angelo; Santoli, Francesco; Shapiro, Irwin I.; Visco, M.

    TEPEE/GReAT is an ongoing experiment aimed at testing the Equivalence Principle (EP) with accuracy equal to 5 parts in 101 5 by means of a differential acceleration detector free falling inside a co-moving, cryogenic, evacuated capsule released from a stratospheric balloon. The detector is spun about a horizontal axis during the fall to modulate a possible EP-violating signal at the spin frequency. This high accuracy requires resolving a very small signal out of the instrument's intrinsic noise and of the noise components associated with the detector's motion and gravity gradients. The development of a cryogenic version of the differential acceleration detector has been recently funded and is ongoing. The main activities related to detector prototype development and testing, evaluation of detector quality factor at lower temperatures, free fall tests, signal extraction (in particular common-mode rejection factor and its stability in time) and flight model requirements will be discussed.

  1. Modular Insulators: Genome Wide Search for Composite CTCF/Thyroid Hormone Receptor Binding Sites

    PubMed Central

    Weth, Oliver; Weth, Christine; Bartkuhn, Marek; Leers, Joerg; Uhle, Florian; Renkawitz, Rainer

    2010-01-01

    The conserved 11 zinc-finger protein CTCF is involved in several transcriptional mechanisms, including insulation and enhancer blocking. We had previously identified two composite elements consisting of a CTCF and a TR binding site at the chicken lysozyme and the human c-myc genes. Using these it has been demonstrated that thyroid hormone mediates the relief of enhancer blocking even though CTCF remains bound to its binding site. Here we wished to determine whether CTCF and TR combined sites are representative of a general feature of the genome, and whether such sites are functional in regulating enhancer blocking. Genome wide analysis revealed that about 18% of the CTCF regions harbored at least one of the four different palindromic or repeated sequence arrangements typical for the binding of TR homodimers or TR/RXR heterodimers. Functional analysis of 10 different composite elements of thyroid hormone responsive genes was performed using episomal constructs. The episomal system allowed recapitulating CTCF mediated enhancer blocking function to be dependent on poly (ADP)-ribose modification and to mediate histone deacetylation. Furthermore, thyroid hormone sensitive enhancer blocking could be shown for one of these new composite elements. Remarkably, not only did the regulation of enhancer blocking require functional TR binding, but also the basal enhancer blocking activity of CTCF was dependent on the binding of the unliganded TR. Thus, a number of composite CTCF/TR binding sites may represent a subset of other modular CTCF composite sites, such as groups of multiple CTCF sites or of CTCF/Oct4, CTCF/Kaiso or CTCF/Yy1 combinations. PMID:20404925

  2. Energy absorption of composite materials

    NASA Technical Reports Server (NTRS)

    Farley, G. L.

    1983-01-01

    Results of a study on the energy absorption characteristics of selected composite material systems are presented and the results compared with aluminum. Composite compression tube specimens were fabricated with both tape and woven fabric prepreg using graphite/epoxy (Gr/E), Kevlar (TM)/epoxy (K/E) and glass/epoxy (Gl/E). Chamfering and notching one end of the composite tube specimen reduced the peak load at initial failure without altering the sustained crushing load, and prevented catastrophic failure. Static compression and vertical impact tests were performed on 128 tubes. The results varied significantly as a function of material type and ply orientation. In general, the Gr/E tubes absorbed more energy than the Gl/E or K/E tubes for the same ply orientation. The 0/ + or - 15 Gr/E tubes absorbed more energy than the aluminum tubes. Gr/E and Gl/E tubes failed in a brittle mode and had negligible post crushing integrity, whereas the K/E tubes failed in an accordian buckling mode similar to the aluminum tubes. The energy absorption and post crushing integrity of hybrid composite tubes were not significantly better than that of the single material tubes.

  3. Variation in the Composition and In Vitro Proinflammatory Effect of Urban Particulate Matter from Different Sites

    PubMed Central

    Manzano-León, Natalia; Quintana, Raúl; Sánchez, Brisa; Serrano, Jesús; Vega, Elizabeth; Vázquez-López, Inés; Rojas-Bracho, Leonora; López-Villegas, Tania; O’Neill, Marie S.; Vadillo-Ortega, Felipe; De Vizcaya-Ruiz, Andrea; Rosas, Irma

    2015-01-01

    Spatial variation in particulate matter–related health and toxicological outcomes is partly due to its composition. We studied spatial variability in particle composition and induced cellular responses in Mexico City to complement an ongoing epidemiologic study. We measured elements, endotoxins, and polycyclic aromatic hydrocarbons in two particle size fractions collected in five sites. We compared the in vitro proinflammatory response of J774A.1 and THP-1 cells after exposure to particles, measuring subsequent TNFα and IL-6 secretion. Particle composition varied by site and size. Particle constituents were subjected to principal component analysis, identifying three components: C1 (Si, Sr, Mg, Ca, Al, Fe, Mn, endotoxin), C2 (polycyclic aromatic hydrocarbons), and C3 (Zn, S, Sb, Ni, Cu, Pb). Induced TNFα levels were higher and more heterogeneous than IL-6 levels. Cytokines produced by both cell lines only correlated with C1, suggesting that constituents associated with soil induced the inflammatory response and explain observed spatial differences. PMID:23335408

  4. Three N-Glycosylation Sites of Human Acetylcholinesterase Shares Similar Glycan Composition.

    PubMed

    Xu, Miranda L; Luk, Wilson K W; Lau, Kei M; Bi, Cathy W C; Cheng, Anthony W M; Gong, Amy G W; Lin, Huangquan; Tsim, Karl W K

    2015-12-01

    Acetylcholinesterase (AChE; EC 3.1.1.7) is a glycoprotein possessing three conserved N-linked glycosylation sites in mammalian species, locating at 296, 381, and 495 residues of the human sequence. Several lines of evidence demonstrated that N-glycosylation of AChE affected the enzymatic activity, as well as its biosynthesis. In order to determine the role of three N-glycosylation sites in AChE activity and glycan composition, the site-directed mutagenesis of N-glycosylation sites in wild-type human AChE(T) sequence was employed to generate the single-site mutants (i.e., AChE(T) (N296Q), AChET (N381Q), and AChE(T) (N495Q)) and all site mutant (i.e., AChE(T) (3N→3Q)). The mutation did not affect AChE protein expression in the transfected cells. The mutants, AChE(T) (3N→3Q) and AChE(T) (N381Q), showed very minimal enzymatic activity, while the other mutants showed reduced activity. By binding to lectins, Con A, and SNA, the glycosylation profile was revealed in those mutated AChE. The binding affinity with lectins showed no significant difference between various N-glycosylation mutants, which suggested that similar glycan composition should be resulted from different N-glycosylation sites. Although the three glycosylation sites within AChE sequence have different extent in affecting the enzymatic activity, their glycan compositions are very similar.

  5. Floristic composition, beta diversity, and nestedness of reference sites for restoration of xeroriparian areas

    USGS Publications Warehouse

    Beauchamp, Vanessa B.; Shafroth, P.B.

    2011-01-01

    In restoration ecology, reference sites serve as models for areas to be restored and can provide a standard of comparison for restoration project outcomes. When reference sites are located a relatively long distance from associated restoration projects, differences in climate, disturbance history, and biogeography can increase beta diversity and may decrease the relevance of reference sites. Variation in factors at the scale of individual reference sites such as patch size, microclimate, barriers to dispersal, or soil chemistry can result in reference site species composition that is a nested subset of the regional species pool. In the western United States, restoration of riparian areas, particularly those occupied by Tamarix spp., has become a priority; however, little is known about suitable native replacement vegetation communities for relatively dry and saline riparian terraces that comprise many of the sites where Tamarix is removed prior to restoration activities. We studied plant communities on riparian terraces along five rivers in New Mexico, USA, to (1) determine whether the floristic composition of reference sites can be predicted by easily measured soil variables such as pH, salinity (electric conductivity), and texture; (2) examine the extent of distance decay in the compositional similarity of xeroriparian plant communities in the southwestern United States; and (3) determine the degree of nestedness in xeroriparian plant communities in relationship to soil variables. We found that sites clustered into groups based largely on variation in soil salinity and texture. Vegetation across all sites was highly nested with dominant, salt-tolerant species found on most soil groups and salt-intolerant subordinate species restricted to lowsalinity soils. The identity of subordinate species was largely site dependent, causing all sites to have the same low degree of similarity regardless of the distance between them. We conclude that, when planning restoration

  6. Floristic composition, beta diversity, and nestedness of reference sites for restoration of xeroriparian areas.

    PubMed

    Beauchamp, Vanessa B; Shafroth, Patrick B

    2011-03-01

    In restoration ecology, reference sites serve as models for areas to be restored and can provide a standard of comparison for restoration project outcomes. When reference sites are located a relatively long distance from associated restoration projects, differences in climate, disturbance history, and biogeography can increase beta diversity and may decrease the relevance of reference sites. Variation in factors at the scale of individual reference sites such as patch size, microclimate, barriers to dispersal, or soil chemistry can result in reference site species composition that is a nested subset of the regional species pool. In the Western United States, restoration of riparian areas, particularly those occupied by Tamarix spp., has become a priority; however, little is known about suitable native replacement vegetation communities for relatively dry and saline riparian terraces that comprise many of the sites where Tamarix is removed prior to restoration activities. We studied plant communities on riparian terraces along five rivers in New Mexico, USA, to (1) determine whether the floristic composition of reference sites can be predicted by easily measured soil variables such as pH, salinity (electric conductivity), and texture; (2) examine the extent of distance decay in the compositional similarity of xeroriparian plant communities in the southwestern United States; and (3) determine the degree of nestedness in xeroriparian plant communities in relationship to soil variables. We found that sites clustered into groups based largely on variation in soil salinity and texture. Vegetation across all sites was highly nested with dominant, salt-tolerant species found on most soil groups and salt-intolerant subordinate species restricted to low-salinity soils. The identity of subordinate species was largely site dependent, causing all sites to have the same low degree of similarity regardless of the distance between them. We conclude that, when planning restoration

  7. Composite Analysis for the Area 5 Radioactive Waste Management Site at the Nevada Test Site, Nye County, Nevada

    SciTech Connect

    V. Yucel

    2001-09-01

    This report summarizes the results of a Composite Analysis (CA) for the Area 5 Radioactive Waste Management Site (RWMS). The Area 5 RWMS is a US Department of Energy (DOE)-operated low-level radioactive waste (LLW) management site located in northern Frenchman Flat on the Nevada Test Site (NTS). The Area 5 RWMS has disposed of low-level radioactive waste in shallow unlined pits and trenches since 1960. Transuranic waste (TRU) and high-specific activity waste was disposed in Greater Confinement Disposal (GCD) boreholes from 1983 to 1989. The purpose of this CA is to determine if continuing operation of the Area 5 RWMS poses an acceptable or unacceptable risk to the public considering the total waste inventory and all other interacting sources of radioactive material in the vicinity. Continuing operation of the Area 5 RWMS will be considered acceptable if the total effective dose equivalent (TEDE) is less than 100 mrem in a year. If the TEDE exceeds 30 mrem in a year, a cost-benefit options analysis must be performed to determine if cost-effective management options exist to reduce the dose further. If the TEDE is found to be less than 30 mrem in a year, an analysis may be performed if warranted to determine if doses are as low as reasonably achievable (ALARA).

  8. Comprehensive analysis of the base composition around the transcription start site in Metazoa

    PubMed Central

    Aerts, Stein; Thijs, Gert; Dabrowski, Michal; Moreau, Yves; De Moor, Bart

    2004-01-01

    Background The transcription start site of a metazoan gene remains poorly understood, mostly because there is no clear signal present in all genes. Now that several sequenced metazoan genomes have been annotated, we have been able to compare the base composition around the transcription start site for all annotated genes across multiple genomes. Results The most prominent feature in the base compositions is a significant local variation in G+C content over a large region around the transcription start site. The change is present in all animal phyla but the extent of variation is different between distinct classes of vertebrates, and the shape of the variation is completely different between vertebrates and arthropods. Furthermore, the height of the variation correlates with CpG frequencies in vertebrates but not in invertebrates and it also correlates with gene expression, especially in mammals. We also detect GC and AT skews in all clades (where %G is not equal to %C or %A is not equal to %T respectively) but these occur in a more confined region around the transcription start site and in the coding region. Conclusions The dramatic changes in nucleotide composition in humans are a consequence of CpG nucleotide frequencies and of gene expression, the changes in Fugu could point to primordial CpG islands, and the changes in the fly are of a totally different kind and unrelated to dinucleotide frequencies. PMID:15171795

  9. Zero and first order phase shift correction for field map estimation with dual-echo GRE using bipolar gradients

    PubMed Central

    Yeo, Desmond T. B.; Chenevert, Thomas L.; Fessler, Jeffrey A.; Kim, Boklye

    2007-01-01

    A simple phase error correction technique used for field map estimation with a generally available dual-echo GRE sequence is presented. Magnetic field inhomogeneity maps estimated using two separate GRE volume acquisitions at different echo times are prone to dynamic motion errors between acquisitions. By using the dual-echo sequence the data are collected during two back-to-back readout gradients in opposite polarity after a single RF pulse, and inter-echo motion artifacts and alignment errors in field map estimation can be factored out. Residual phase error from the asymmetric readout pulses is modeled as an affine term in the readout direction. Results from phantom and human data suggest that the first order phase correction term stays constant over time and, hence, can be applied to different data acquired with the same protocol over time. The zero order phase correction term may change with time and is estimated empirically for different scans. PMID:17442524

  10. The development of TEPEE/GReAT experiment to test the Equivalence Principle

    NASA Astrophysics Data System (ADS)

    Iafolla, Valerio; Peron, Roberto; Lorenzini, Enrico C.; Shapiro, Irwin I.

    2012-07-01

    TEPEE/GReAT is a proposed experiment aimed at testing the Equivalence Principle (EP) with accuracy equal to 5 parts in (10^{15}) by means of a differential acceleration detector free falling inside a co--moving, cryogenic, evacuated capsule released from a stratospheric balloon. The detector is spun about a horizontal axis during the fall to modulate a possible EP--violating signal at the spin frequency. The high accuracy requires resolving a very small signal out of key components like the instrument's intrinsic noise and of the noise components associated with the detector's motion and gravity gradients. The development of a cryogenic version of the differential acceleration detector has been the object of a recent research activity. The paper describes the differential accelerometer prototype that consists of two self--differential accelerometers, capable of rejecting both linear and angular noise and retaining the signal associated with a possible EP violation. Moreover, the paper discusses briefly the development and testing in the laboratory of the instrument and shows preliminary results obtained at cryogenic temperature (down to 11 K) of the detector differential measurement mode.

  11. TEPEE/GReAT (General Relativity Accuracy Test in an Einstein Elevator): experiment development status

    NASA Astrophysics Data System (ADS)

    Peron, Roberto

    TEPEE/GReAT is an ongoing experiment aimed at testing the Principle of Equivalence (PE) at a level of accuracy equal to 5 parts in 101 5 by means of a differential acceleration detector free falling inside a co-moving, cryogenic, evacuated capsule released from a stratospheric balloon. The detector is spun about a horizontal axis during the fall to modulate the PE violation signal at the spin frequency. The high accuracy requires resolving a very small signal out of the instrument's intrinsic noise and those noise components associated with the detector's motion and gravity gradients. Imperfections in the construction of the detector produce the latter noise components which, however, can be separated in frequency from the PE violation signal with specific configurations of the detector and its sensing masses. The following points will be discussed in the paper: i) those configurations of the differential acceleration detector that are capable of providing a remarkable frequency separation between the noise components mentioned above and the PE violation signal; ii) the latest advances in the development of detector's prototypes and specifically the electronic set-up that provides a high common mode rejection factor; iii) the experimental results obtained with instrument prototypes that show high sensitivity to differential accelerations and a strong common-mode-rejection factor.

  12. Synthesis of supported bimetallic nanoparticles with controlled size and composition distributions for active site elucidation

    SciTech Connect

    Hakim, Sikander H.; Sener, Canan; Alba Rubio, Ana C.; Gostanian, Thomas M.; O'neill, Brandon J; Ribeiro, Fabio H.; Miller, Jeffrey T.; Dumesic, James A

    2015-08-01

    Elucidation of active sites in supported bimetallic catalysts is complicated by the high level of dispersity in the nanoparticle size and composition that is inherent in conventional methods of catalyst preparation. We present a synthesis strategy that leads to highly dispersed, bimetallic nanoparticles with uniform particle size and composition by means of controlled surface reactions. We demonstrate the synthesis of three systems, RhMo, PtMo, and RhRe, consisting of a highly reducible metal with an oxophilic promoter. These catalysts are characterized by FTIR, CO chemisorption, STEM/EDS, TPR, and XAS analysis. The catalytic properties of these bimetallic nanoparticles were probed for the selective CO hydrogenolysis of (hydroxymethyl)tetrahydropyran to produce 1,6 hexanediol. Based on the characterization results and reactivity trends, the active sites in the hydrogenolysis reaction are identified to be small ensembles of the more noble metal (Rh, Pt) adjacent to highly reduced moieties of the more oxophilic metal (Mo, Re).

  13. [Characteristics of chemical composition of glass finds from the Qiemo tomb sites on the Silk Road].

    PubMed

    Cheng, Qian; Guo, Jin-Long; Wang, Bo; Cui, Jian-Feng

    2012-07-01

    Qiemo was an ancient country on the south branch of the Silk Road. The Zagunluke tomb site is located at the Qiemo County of the Xinjiang Uygur Autonomous Region. Glass beads and only colourless glass cup were excavated from the 3rd cultural layer of the tomb site M133 and M49, dated between the 1st AD-6th AD. LA-ICP-AES was applied to analyse chemical composition of these glass finds with the corning glass as reference. According to the result, characteristics of chemical composition are very similar to typical soda-lime glass, which indicates the glasses were imported productions from the west. These soda-lime glasses were divided into two groups in terms of flux source: natron glass and plant ash glass. This analytical research indicates the history of glass trade and communication between the East and the West on the Silk Road.

  14. Elemental composition of Marrubium astracanicum Jacq. growing in tungsten-contaminated sites.

    PubMed

    Güleryüz, Gürcan; Erdemir, Ümran Seven; Arslan, Hülya; Güçer, Şeref

    2016-09-01

    This study evaluates the elemental (W, Mo, Zn, Fe, Cu, Cd, Mn, Pb, Cr, Co, B, and Bi) composition of Marrubium astracanicum Jacq. (Lamiaceae), around the abandoned tungsten mine on Uludağ Mountain, Turkey, to determine if it is an appropriate candidate for phytomonitoring and/or phytoremediation purposes. Three sample sites were selected around the mine for soil and plant sampling. Two sites approximately 500 m from the mine were assumed to be unpolluted sites. The other site was selected from a waste removal pool (WRP) and was assumed to be a polluted site. The soil and different organs (roots, leaves, and flowers) of plant samples were analyzed by inductively coupled plasma-mass spectrometry (ICP-MS) to determine the elemental content. The classic open wet digestion procedure was applied to the samples with 5 mL HNO3 and 3 mL H2O2 in a borosilicate glass vessel for the roots, leaves, and the flowers of the plants. Kjeldahl digestion was used for the soil samples. The W, Zn, Fe, Cu, Cd, Mn, Pb, B, and Bi contents were found to be higher in the soil samples from the waste removal pools compared with the samples from the unpolluted sites. We also found that the elemental composition of M. astracanicum has generally been increased by the activity of the tungsten mine, and there were significant correlations between the elemental contents of the soil samples and plant parts, except for Mo and Cr. The high level of many elements in the soil samples indicates the presence of contamination related to tungsten-mining activity on Uludağ Mountain. Assessing the elemental contents of M. astracanicum, we can suggest this species as a candidate for phytoremediation purposes of W-contaminated sites due to its high W-accumulation capacity.

  15. Aerosol measurements at a high-elevation site: composition, size, and cloud condensation nuclei activity

    SciTech Connect

    Friedman, Beth; Zelenyuk, Alla; Beranek, Josef; Kulkarni, Gourihar R.; Pekour, Mikhail S.; Hallar, Anna G.; McCubbin, Ian; Thornton, Joel A.; Cziczo, D. J.

    2013-12-09

    We present measurements of CCN concentrations and associated aerosol composition and size properties at a high-elevation research site in March 2011. CCN closure and aerosol hygroscopicity were assessed using simplified assumptions of bulk aerosol properties as well as a new method utilizing single particle composition and size to assess the importance of particle mixing state in CCN activation. Free troposphere analysis found no significant difference between the CCN activity of free tropospheric aerosol and boundary layer aerosol at this location. Closure results indicate that using only size and number information leads to adequate prediction, in the majority of cases within 50%, of CCN concentrations, while incorporating the hygroscopicity parameters of the individual aerosol components measured by single particle mass spectrometry adds to the agreement, in most cases within 20%, between predicted and measured CCN concentrations. For high-elevation continental sites, with largely aged aerosol and low amounts of local area emissions, a lack of chemical knowledge and hygroscopicity may not hinder models in predicting CCN concentrations. At sites influenced by fresh emissions or more heterogeneous particle types, single particle composition information may be more useful in predicting CCN concentrations and understanding the importance of particle mixing state on CCN activation.

  16. Long-term changes in species composition and relative abundances of sharks at a provisioning site.

    PubMed

    Brunnschweiler, Juerg M; Abrantes, Kátya G; Barnett, Adam

    2014-01-01

    Diving with sharks, often in combination with food baiting/provisioning, has become an important product of today's recreational dive industry. Whereas the effects baiting/provisioning has on the behaviour and abundance of individual shark species are starting to become known, there is an almost complete lack of equivalent data from multi-species shark diving sites. In this study, changes in species composition and relative abundances were determined at the Shark Reef Marine Reserve, a multi-species shark feeding site in Fiji. Using direct observation sampling methods, eight species of sharks (bull shark Carcharhinus leucas, grey reef shark Carcharhinus amblyrhynchos, whitetip reef shark Triaenodon obesus, blacktip reef shark Carcharhinus melanopterus, tawny nurse shark Nebrius ferrugineus, silvertip shark Carcharhinus albimarginatus, sicklefin lemon shark Negaprion acutidens, and tiger shark Galeocerdo cuvier) displayed inter-annual site fidelity between 2003 and 2012. Encounter rates and/or relative abundances of some species changed over time, overall resulting in more individuals (mostly C. leucas) of fewer species being encountered on average on shark feeding dives at the end of the study period. Differences in shark community composition between the years 2004-2006 and 2007-2012 were evident, mostly because N. ferrugineus, C. albimarginatus and N. acutidens were much more abundant in 2004-2006 and very rare in the period of 2007-2012. Two explanations are offered for the observed changes in relative abundances over time, namely inter-specific interactions and operator-specific feeding protocols. Both, possibly in combination, are suggested to be important determinants of species composition and encounter rates, and relative abundances at this shark provisioning site in Fiji. This study, which includes the most species from a spatially confined shark provisioning site to date, suggests that long-term provisioning may result in competitive exclusion among shark

  17. Correlated compositional and mineralogical investigations at the Chang'e-3 landing site

    NASA Astrophysics Data System (ADS)

    Ling, Zongcheng; Jolliff, Bradley L.; Wang, Alian; Li, Chunlai; Liu, Jianzhong; Zhang, Jiang; Li, Bo; Sun, Lingzhi; Chen, Jian; Xiao, Long; Liu, Jianjun; Ren, Xin; Peng, Wenxi; Wang, Huanyu; Cui, Xingzhu; He, Zhiping; Wang, Jianyu

    2015-12-01

    The chemical compositions of relatively young mare lava flows have implications for the late volcanism on the Moon. Here we report the composition of soil along the rim of a 450-m diameter fresh crater at the Chang'e-3 (CE-3) landing site, investigated by the Yutu rover with in situ APXS (Active Particle-induced X-ray Spectrometer) and VNIS (Visible and Near-infrared Imaging Spectrometer) measurements. Results indicate that this region's composition differs from other mare sample-return sites and is a new type of mare basalt not previously sampled, but consistent with remote sensing. The CE-3 regolith derived from olivine-normative basaltic rocks with high FeO/(FeO+MgO). Deconvolution of the VNIS data indicates abundant high-Ca ferropyroxene (augite and pigeonite) plus Fe-rich olivine. We infer from the regolith composition that the basaltic source rocks formed during late-stage magma-ocean differentiation when dense ferropyroxene-ilmenite cumulates sank and mixed with deeper, relatively ferroan olivine and orthopyroxene in a hybridized mantle source.

  18. Correlated compositional and mineralogical investigations at the Chang′e-3 landing site

    PubMed Central

    Ling, Zongcheng; Jolliff, Bradley L.; Wang, Alian; Li, Chunlai; Liu, Jianzhong; Zhang, Jiang; Li, Bo; Sun, Lingzhi; Chen, Jian; Xiao, Long; Liu, Jianjun; Ren, Xin; Peng, Wenxi; Wang, Huanyu; Cui, Xingzhu; He, Zhiping; Wang, Jianyu

    2015-01-01

    The chemical compositions of relatively young mare lava flows have implications for the late volcanism on the Moon. Here we report the composition of soil along the rim of a 450-m diameter fresh crater at the Chang′e-3 (CE-3) landing site, investigated by the Yutu rover with in situ APXS (Active Particle-induced X-ray Spectrometer) and VNIS (Visible and Near-infrared Imaging Spectrometer) measurements. Results indicate that this region's composition differs from other mare sample-return sites and is a new type of mare basalt not previously sampled, but consistent with remote sensing. The CE-3 regolith derived from olivine-normative basaltic rocks with high FeO/(FeO+MgO). Deconvolution of the VNIS data indicates abundant high-Ca ferropyroxene (augite and pigeonite) plus Fe-rich olivine. We infer from the regolith composition that the basaltic source rocks formed during late-stage magma-ocean differentiation when dense ferropyroxene-ilmenite cumulates sank and mixed with deeper, relatively ferroan olivine and orthopyroxene in a hybridized mantle source. PMID:26694712

  19. Correlated compositional and mineralogical investigations at the Chang'e-3 landing site.

    PubMed

    Ling, Zongcheng; Jolliff, Bradley L; Wang, Alian; Li, Chunlai; Liu, Jianzhong; Zhang, Jiang; Li, Bo; Sun, Lingzhi; Chen, Jian; Xiao, Long; Liu, Jianjun; Ren, Xin; Peng, Wenxi; Wang, Huanyu; Cui, Xingzhu; He, Zhiping; Wang, Jianyu

    2015-12-22

    The chemical compositions of relatively young mare lava flows have implications for the late volcanism on the Moon. Here we report the composition of soil along the rim of a 450-m diameter fresh crater at the Chang'e-3 (CE-3) landing site, investigated by the Yutu rover with in situ APXS (Active Particle-induced X-ray Spectrometer) and VNIS (Visible and Near-infrared Imaging Spectrometer) measurements. Results indicate that this region's composition differs from other mare sample-return sites and is a new type of mare basalt not previously sampled, but consistent with remote sensing. The CE-3 regolith derived from olivine-normative basaltic rocks with high FeO/(FeO+MgO). Deconvolution of the VNIS data indicates abundant high-Ca ferropyroxene (augite and pigeonite) plus Fe-rich olivine. We infer from the regolith composition that the basaltic source rocks formed during late-stage magma-ocean differentiation when dense ferropyroxene-ilmenite cumulates sank and mixed with deeper, relatively ferroan olivine and orthopyroxene in a hybridized mantle source.

  20. Chemical composition and mass closure of ambient PM10 at urban sites

    NASA Astrophysics Data System (ADS)

    Terzi, Eleni; Argyropoulos, George; Bougatioti, Aikaterini; Mihalopoulos, Nikolaos; Nikolaou, Kostas; Samara, Constantini

    2010-06-01

    The chemical composition of PM10 was studied during summer and winter sampling campaigns conducted at two different urban sites in the city of Thessaloniki, Greece (urban-traffic, UT and urban-industrial, UI). PM10 samples were chemically analysed for minerals (Si, Al, Ca, Mg, Fe, Ti, K), trace elements (Cd, Cr, Cu, Mn, Pb, V, Zn, Te, Co, Ni, Se, Sr, As, and Sb), water-soluble ions (Cl -, NO 3-, SO 42-, Na +, K +, NH 4+, Ca 2+, Mg 2+) and carbonaceous compounds (OC, EC). Spatial variations of atmospheric concentrations showed significantly higher levels of minerals, some trace metals and TC at the UI site, while at the UT site significantly higher levels of elements like Cd, Ba, Sn, Sb and Te were observed. Crustal elements, excepting Ca at the UI site, did not exhibit significant seasonal variations at any site pointing to constant emissions throughout the year. In order to reconstruct the particle mass, the determined components were classified into six classes as follows: mineral matter (MIN), trace elements (TE), organic matter (OM), elemental carbon (EC), sea salt (SS) and secondary inorganic aerosol (SIA). Good correlations with slopes close to 1 were found between chemically determined and gravimetrically measured PM10 masses for both sites. According to the chemical mass closure obtained, the major components of PM10 at both sites were MIN (soil-derived compounds), followed by OM and SIA. The fraction unaccounted for by chemical analysis comprised on average 8% during winter and 15% during summer at the urban-industrial site, while at the urban-traffic site the percentages were 21.5% in winter and 4.8% in summer.

  1. Contrasted glass-whole rock compositions and phenocryst re-distribution, IPOD Sites 417 and 418

    NASA Astrophysics Data System (ADS)

    Staudigel, H.; Bryan, W. B.

    1982-01-01

    Major element composition ranges of closely associated basalt glass-whole rock pairs from individual small cooling units approach the total known range of basalt glass and whole rock compositions at IPOD sites 417 and 418. The whole rock samples fall into two groups: one is depleted in MgO and distinctly enriched in plagioclase but has lost some olivine and/or pyroxene relative to its corresponding glass; and the other is enriched in MgO and in phenocrysts of olivine and pyroxene as well as plagioclase compared to its corresponding glass. By analogy with observed phenocryst distributions in lava pillows, tubes, and dikes, and with some theoretical studies, we infer that bulk rock compositions are strongly affected by phenocryst redistribution due to gravity settling, flotation, and dynamic sorting after eruption, although specific models are not well constrained by the one-dimensional geometry of drill core. Compositional trends or groupings in whole rock data resulting from such late-stage processes should not be confused with more fundamental compositional effects produced in deep chambers or during partial melting.

  2. Analysis of elemental composition of porcelains unearthed from Waguantan kiln site by PIXE-RBS

    NASA Astrophysics Data System (ADS)

    Zhou, Z.; Zhang, K.; Xia, C. D.; Liu, M. T.; Zhu, J. J.; An, Z.; Bai, B.

    2015-03-01

    A method combining proton-induced X-ray emission spectrometry (PIXE) and Rutherford backscattering spectrometry (RBS) was used to determine the composition of 61 porcelain shards from the Yuan Dynasty (1271-1368 A.D.) unearthed from the Waguantan kiln site at Tianzhu County in Guizhou Province, China. Based on our previous experimental setup, an electron gun device with a LaB6 crystal cathode was installed to solve the problem created when the incident proton beams generated electric charge accumulations on the surfaces of the insulating porcelain samples, which induced a large bremsstrahlung background. The use of the electron gun has largely eliminated the large bremsstrahlung background and has therefore improved the detection limits for elements, especially for trace elements, and made it possible to determine the origin of the porcelains based on the trace elements. Major and trace elemental compositions of the porcelain bodies and glazes measured by PIXE and RBS were analyzed by the factor analysis method. The factor analysis showed that a few pieces of porcelain with a style similar to the porcelain of the Longquan kiln among the unearthed porcelains from the Waguantan kiln site did not have obvious differences in elemental compositions from other remaining porcelains unearthed from the Waguantan kiln site, indicating that the pieces of unearthed porcelain with the Longquan kiln style did in fact belong to the product fired locally by imitating the model of the Longquan celadon with local raw materials. This result therefore indicated that the Longquan kiln technology that originated from the Five Dynasties (907-960 A.D.) had been propagated to the Waguantan kiln site of Guizhou Province in the Yuan Dynasty.

  3. Quasi-static and multi-site high velocity impact response of composite structures

    NASA Astrophysics Data System (ADS)

    Deka, Lakshya

    Understanding of low and high velocity transverse impact of laminated fiber reinforced composites is of interest in military, aerospace, marine and civilian structures. Recent advances in the field of numerical simulation provide a means of predicting the performance characteristics of layered materials for impact protection. The overall objective of this work is to investigate the behavior of laminated composites which include both thermoplastic and thermoset systems subjected to quasi-static, low and high velocity impact; both from an experimental and numerical modeling view point. To analyze this problem, a series of quasi-static, low and high velocity impact tests have been performed on laminated composite plates namely E-glass/polypropylene, S2-glass/epoxy and carbon/polyphenylene sulphide. To analyze the perforation mechanism, ballistic limit and damage evolution, an explicit three-dimensional finite element code LS-DYNA is used. Selecting proper material models and contact definition is one of the major criteria for obtaining accurate numerical simulation. Material model 162 (MAT 162), a progressive failure model based on modified Hashin's criteria and continuum damage mechanics (CDM) has been assigned to predict failure of the laminate. This approach is used because during transverse impact, a composite laminate undergoes progressive damage. The laminate and the projectile are meshed using brick elements with single integration points. The impact velocity ranges from 180 to 400 m s -1. This work focuses on three main aspects; (i) To obtain static and dynamic material properties to incorporate into the finite element model and predict the ballistic limit of a composite laminate based on the information from quasi-static punch shear test; (ii) To understand penetration, material erosion, ballistic limit and delamination mechanisms for single and multi-site high velocity (or ballistic) impact of composite laminates; (iii) To investigate the different failure

  4. Identifying 2'-O-methylationation sites by integrating nucleotide chemical properties and nucleotide compositions.

    PubMed

    Chen, Wei; Feng, Pengmian; Tang, Hua; Ding, Hui; Lin, Hao

    2016-06-01

    2'-O-methylationation is an important post-transcriptional modification and plays important roles in many biological processes. Although experimental technologies have been proposed to detect 2'-O-methylationation sites, they are cost-ineffective. As complements to experimental techniques, computational methods will facilitate the identification of 2'-O-methylationation sites. In the present study, we proposed a support vector machine-based method to identify 2'-O-methylationation sites. In this method, RNA sequences were formulated by nucleotide chemical properties and nucleotide compositions. In the jackknife cross-validation test, the proposed method obtained an accuracy of 95.58% for identifying 2'-O-methylationation sites in the human genome. Moreover, the model was also validated by identifying 2'-O-methylation sites in the Mus musculus and Saccharomyces cerevisiae genomes, and the obtained accuracies are also satisfactory. These results indicate that the proposed method will become a useful tool for the research on 2'-O-methylation.

  5. Using Apollo Sites and Soils to Compositionally Ground Truth Diviner Lunar Radiometer Observations

    NASA Technical Reports Server (NTRS)

    Greenhagen, Benjamin T.; Lucey, P. G.; Song, E.; Thomas, I R.; Bowles, N. E.; DonaldsonHanna, K. L.; Allen, C.; Foote, E. J.; Paige, D .A.

    2012-01-01

    Apollo landing sites and returned soils afford us a unique opportunity to "ground truth" Diviner Lunar Radiometer compositional observations, which are the first global, high resolution , thermal infrared measurements of an airless body. The Moon is the most accessible member of the most abundant class of solar system objects, which includes Mercury, asteroids, and icy satellites. And the Apollo samples returned from the Moon are the only extraterrestrial samples with known spatial context. Here we compare Diviner observations of Apollo landing sites and compositional and spectral laboratory measurements of returned Apollo soils. Diviner, onboard NASA's Lunar Reconnaissance Orbiter, has three spectral channels near 8 micron that were designed to characterize the mid-infrared emissivity maximum known as the Christiansen feature (CF), a well-studied indicator of silicate mineralogy. It has been observed that thermal infrared spectra measured in simulated lunar environment (SLE) are significantly altered from spectra measured under terrestrial or martian conditions, with enhanced CF contrast and shifted CF position relative to other spectral features. Therefore only thermal emission experiments conducted in SLE are directly comparable to Diviner data. With known compositions, Apollo landing sites and soils are important calibration points for the Diviner dataset, which includes all six Apollo sites at approximately 200 m spatial resolution. Differences in measured CFs caused by composition and space weathering are apparent in Diviner data. Analyses of Diviner observations and SLE measurements for a range of Apollo soils show good agreement, while comparisons to thermal reflectance measurements under ambient conditions do not agree well, which underscores the need for SLE measurements and validates our measurement technique. Diviner observations of Apollo landing sites are also correlated with geochemical measurements of Apollo soils from the Lunar Sample Compendium

  6. Atmospheric aerosol compositions and sources at two national background sites in northern and southern China

    NASA Astrophysics Data System (ADS)

    Zhu, Qiao; He, Ling-Yan; Huang, Xiao-Feng; Cao, Li-Ming; Gong, Zhao-Heng; Wang, Chuan; Zhuang, Xin; Hu, Min

    2016-08-01

    Although China's severe air pollution has become a focus in the field of atmospheric chemistry and the mechanisms of urban air pollution there have been researched extensively, few field sampling campaigns have been conducted at remote background sites in China, where air pollution characteristics on a larger scale are highlighted. In this study, an Aerodyne high-resolution time-of-flight aerosol mass spectrometer (HR-ToF-AMS), together with an Aethalometer, was deployed at two of China's national background sites in northern (Lake Hongze site; 33.23° N, 118.33° E; altitude 21 m) and southern (Mount Wuzhi site; 18.84° N, 109.49° E; altitude 958 m) China in the spring seasons in 2011 and 2015, respectively, in order to characterize submicron aerosol composition and sources. The campaign-average PM1 concentration was 36.8 ± 19.8 µg m-3 at the northern China background (NCB) site, which was far higher than that at the southern China background (SCB) site (10.9 ± 7.8 µg m-3). Organic aerosol (OA) (27.2 %), nitrate (26.7 %), and sulfate (22.0 %) contributed the most to the PM1 mass at NCB, while OA (43.5 %) and sulfate (30.5 %) were the most abundant components of the PM1 mass at SCB, where nitrate only constituted a small fraction (4.7 %) and might have contained a significant amount of organic nitrates (5-11 %). The aerosol size distributions and organic aerosol elemental compositions all indicated very aged aerosol particles at both sites. The OA at SCB was more oxidized with a higher average oxygen to carbon (O / C) ratio (0.98) than that at NCB (0.67). Positive matrix factorization (PMF) analysis was used to classify OA into three components, including a hydrocarbon-like component (HOA, attributed to fossil fuel combustion) and two oxygenated components (OOA1 and OOA2, attributed to secondary organic aerosols from different source areas) at NCB. PMF analysis at SCB identified a semi-volatile oxygenated component (SV-OOA) and a low-volatility oxygenated

  7. Walker Branch Throughfall Displacement Experiment Data Report: Site Characterization, System Performance, Weather, Species Composition, and Growth

    SciTech Connect

    Hanson, P.J.

    2001-09-04

    This numeric data package provides data sets, and accompanying documentation, on site characterization, system performance, weather, species composition, and growth for the Throughfall Displacement Experiment, which was established in the Walker Branch Watershed of East Tennessee to provide data on the responses of forests to altered precipitation regimes. The specific data sets include soil water content and potential, coarse fraction of the soil profile, litter layer temperature, soil temperature, monthly weather, daily weather, hourly weather, species composition of trees and saplings, mature tree and sapling annual growth, and relative leaf area index. Fortran and SAS{trademark} access codes are provided to read the ASCII data files. The data files and this documentation are available without charge on a variety of media and via the Internet from the Carbon Dioxide Information Analysis Center (CDIAC).

  8. Quenching Effects on Iron Site Partitioning in the Apollo 17 Orange Glass Composition

    NASA Technical Reports Server (NTRS)

    Dyar, M. D.

    1985-01-01

    Mare petrogenesis and the structure of the lunar interior were studied. Analyses of the spectral signatures of glasses was useful to remote sensing applications in areas of the moon where glass is in significant proportions in the lunar soil. The studies provided information on Fe site occupancies in glasses, which are used to construe oxygen fugacities at the lunar surface. Data were obtained through work on synthetic analogues of lunar glasses. However, recent Mossbauer studies of an Apollo 15 green glass composition have shown that synthetic glasses are extremely sensitive to variations in quenching media. Glass structure and Fe(3+)/Fe(2+) ratios are strongly controlled by quenching conditions, which may mask the effects of the original glass' formation temperature or oxygen partial pressure. Synthetic glasses were often run at low fugacities on Pt wires. The effects of quench media on the Apollo 17 orange glass composition are considered.

  9. Assessment of fish abundance and species composition at selected sites in South Dakota: an overview

    USGS Publications Warehouse

    Harwood, Alison

    2010-01-01

    The U.S. Geological Survey (USGS) conducted surveys of streams throughout the State of South Dakota during 2008-09 as part of the U.S. Environmental Protection Agency?s (USEPA) National Rivers and Streams Assessment (NRSA) Program. During 2008-09, as part of the stream assessment, the USGS completed surveys of fish populations and species composition at 64 sites. Fish were inventoried at 60 of the 64 sites, but not at four of the sites because water was too low to sustain fish or specific conductivity was too high to electroshock effectively. Four of the sites were surveyed in 2000-04 during the USEPA's Environmental Monitoring and Assessment Program-West (EMAP-West) project. Two wadeable sites and two boatable sites were revisited for quality-assurance/quality-control requirements. During the study, both wadeable and boatable streams were sampled using electrofishing equipment and methods. Of the 64 sites, 62 were wadeable and 2 were boatable. Procedures for sampling wadeable streams differed slightly from procedures for boatable streams. Backpack electrofishing equipment was used for wadeable streams, whereas boat electrofishing equipment was used for boatable streams. Wadeable streams also were fished in an opposite direction than boatable streams. Several species of fish were collected during the NRSA. Species diversity ranged from 0-11 species in wadeable streams and from 6-26 species in boatable streams. Many common species were sampled during the study. The most frequently sampled fish was the sand shiner (Notropis stramineus), with 609 individuals sampled. In contrast, only one heritage species, the skipjack herring (Alosa chrysochloris), was identified during 2008-09. Common anomalies found in fish caught were parasitic lesions, "black spot disease," and tumors. When comparing the fish sampling results for the four sites visited in both 2000-04 and in 2008-09, more individuals and species were collected during 2008-09 than in 2000-04 at two sites, whereas

  10. Size-resolved aerosol composition and its link to hygroscopicity at a forested site in Colorado

    NASA Astrophysics Data System (ADS)

    Levin, E. J. T.; Prenni, A. J.; Palm, B. B.; Day, D. A.; Campuzano-Jost, P.; Winkler, P. M.; Kreidenweis, S. M.; DeMott, P. J.; Jimenez, J. L.; Smith, J. N.

    2014-03-01

    Aerosol hygroscopicity describes the ability of a particle to take up water and form a cloud droplet. Modeling studies have shown sensitivity of precipitation-producing cloud systems to the availability of aerosol particles capable of serving as cloud condensation nuclei (CCN), and hygroscopicity is a key parameter controlling the number of available CCN. Continental aerosol is typically assumed to have a representative hygroscopicity parameter, κ, of 0.3; however, in remote locations this value can be lower due to relatively large mass fractions of organic components. To further our understanding of aerosol properties in remote areas, we measured size-resolved aerosol chemical composition and hygroscopicity in a forested, mountainous site in Colorado during the six-week BEACHON-RoMBAS (Bio-hydro-atmosphere interactions of Energy, Aerosols, Carbon, H2O, Organics and Nitrogen-Rocky Mountain Biogenic Aerosol Study) campaign. This campaign followed a year-long measurement period at this site, and results from the intensive campaign shed light on the previously reported seasonal cycle in aerosol hygroscopicity. New particle formation events were observed routinely at this site and nucleation mode composition measurements indicated that the newly formed particles were predominantly organic. These events likely contribute to the dominance of organic species at smaller sizes, where aerosol organic mass fractions were between 70 and 90%. Corresponding aerosol hygroscopicity was observed to be in the range κ = 0.15-0.22, with hygroscopicity increasing with particle size. Aerosol chemical composition measured by an aerosol mass spectrometer and calculated from hygroscopicity measurements agreed very well during the intensive study, with an assumed value of κorg = 0.13 resulting in the best agreement.

  11. In situ observations of the isotopic composition of methane at the Cabauw tall tower site

    NASA Astrophysics Data System (ADS)

    Röckmann, Thomas; Eyer, Simon; van der Veen, Carina; Popa, Maria E.; Tuzson, Béla; Monteil, Guillaume; Houweling, Sander; Harris, Eliza; Brunner, Dominik; Fischer, Hubertus; Zazzeri, Giulia; Lowry, David; Nisbet, Euan G.; Brand, Willi A.; Necki, Jaroslav M.; Emmenegger, Lukas; Mohn, Joachim

    2016-08-01

    High-precision analyses of the isotopic composition of methane in ambient air can potentially be used to discriminate between different source categories. Due to the complexity of isotope ratio measurements, such analyses have generally been performed in the laboratory on air samples collected in the field. This poses a limitation on the temporal resolution at which the isotopic composition can be monitored with reasonable logistical effort. Here we present the performance of a dual isotope ratio mass spectrometric system (IRMS) and a quantum cascade laser absorption spectroscopy (QCLAS)-based technique for in situ analysis of the isotopic composition of methane under field conditions. Both systems were deployed at the Cabauw Experimental Site for Atmospheric Research (CESAR) in the Netherlands and performed in situ, high-frequency (approx. hourly) measurements for a period of more than 5 months. The IRMS and QCLAS instruments were in excellent agreement with a slight systematic offset of (+0.25 ± 0.04) ‰ for δ13C and (-4.3 ± 0.4) ‰ for δD. This was corrected for, yielding a combined dataset with more than 2500 measurements of both δ13C and δD. The high-precision and high-temporal-resolution dataset not only reveals the overwhelming contribution of isotopically depleted agricultural CH4 emissions from ruminants at the Cabauw site but also allows the identification of specific events with elevated contributions from more enriched sources such as natural gas and landfills. The final dataset was compared to model calculations using the global model TM5 and the mesoscale model FLEXPART-COSMO. The results of both models agree better with the measurements when the TNO-MACC emission inventory is used in the models than when the EDGAR inventory is used. This suggests that high-resolution isotope measurements have the potential to further constrain the methane budget when they are performed at multiple sites that are representative for the entire European domain.

  12. Metals other than uranium affected microbial community composition in a historical uranium-mining site.

    PubMed

    Sitte, Jana; Löffler, Sylvia; Burkhardt, Eva-Maria; Goldfarb, Katherine C; Büchel, Georg; Hazen, Terry C; Küsel, Kirsten

    2015-12-01

    To understand the links between the long-term impact of uranium and other metals on microbial community composition, ground- and surface water-influenced soils varying greatly in uranium and metal concentrations were investigated at the former uranium-mining district in Ronneburg, Germany. A soil-based 16S PhyloChip approach revealed 2358 bacterial and 35 archaeal operational taxonomic units (OTU) within diverse phylogenetic groups with higher OTU numbers than at other uranium-contaminated sites, e.g., at Oak Ridge. Iron- and sulfate-reducing bacteria (FeRB and SRB), which have the potential to attenuate uranium and other metals by the enzymatic and/or abiotic reduction of metal ions, were found at all sites. Although soil concentrations of solid-phase uranium were high, ranging from 5 to 1569 μg·g (dry weight) soil(-1), redundancy analysis (RDA) and forward selection indicated that neither total nor bio-available uranium concentrations contributed significantly to the observed OTU distribution. Instead, microbial community composition appeared to be influenced more by redox potential. Bacterial communities were also influenced by bio-available manganese and total cobalt and cadmium concentrations. Bio-available cadmium impacted FeRB distribution while bio-available manganese and copper as well as solid-phase zinc concentrations in the soil affected SRB composition. Archaeal communities were influenced by the bio-available lead as well as total zinc and cobalt concentrations. These results suggest that (i) microbial richness was not impacted by heavy metals and radionuclides and that (ii) redox potential and secondary metal contaminants had the strongest effect on microbial community composition, as opposed to uranium, the primary source of contamination.

  13. Addendum 1 Composite Analysis for the Area 5 Radioactive Waste Management Site at the Nevada Test Site, Nye County, Nevada

    SciTech Connect

    Vefa Yucel

    2001-11-01

    A disposal authorization statement (DAS) was issued by the U.S. Department of Energy/Headquarters (DOE/HQ) on December 5, 2000, authorizing the DOE's National Nuclear Security Administration Nevada Operations Office to continue the operation of the Area 5 Radioactive Waste Management Site (RWMS) at the Nevada Test Site for the disposal of low-level waste and mixed low-level waste. Prior to the issuance of the DAS, the Low-Level Waste Disposal Facility Federal Review Group (LFRG) had conducted reviews of the performance assessment (PA) and the composite analysis (CA) for the Area 5 RWMS, in accordance with the requirements of the DOE Radioactive Waste Management Order DOE O 435.1. A brief history of the reviews is as follows. (The reviews were conducted by independent review teams chartered by the LFRG; the review findings and recommendations were issued in review team reports to the LFRG.) The LFRG accepted the initial PA, with conditions, on August 30, 1996. Revision 2.1 to the PA was issued in January 1998, implementing the conditions of acceptance of the 1996 PA. The LFRG reviewed Revision 2.1 as part of the Area 5 RWMS CA review during 2000, and found it acceptable. The CA and the Supplemental Information provided in response to issues identified during the initial review of the CA were accepted by the LFRG. The Supplemental Information (including the responses to four key issues) is included in the Review Team Report to the LFRG, which recommends that it be incorporated into the CA and issued to all known holders of the CA. The Area 5 RWMS DAS requires that the Supplemental Information generated during the DOE/HQ review of the CA be incorporated into the CA within one year of the date of issuance of the DAS. This report, the first addendum to the Area 5 CA, is prepared to fulfill that requirement. The Supplemental Information includes the following: Issues Identified in the Review Team Report; Crosswalk Presentation; and Maintaining Doses As Low As Reasonably

  14. The chemical composition and fluxes of atmospheric wet deposition at four sites in South Africa

    NASA Astrophysics Data System (ADS)

    Conradie, E. H.; Van Zyl, P. G.; Pienaar, J. J.; Beukes, J. P.; Galy-Lacaux, C.; Venter, A. D.; Mkhatshwa, G. V.

    2016-12-01

    South Africa is the economic hub of southern Africa and is regarded as an important source region of atmospheric pollutants. A nitrogen dioxide (NO2) hotspot is clearly visible from space over the South African Mpumalanga Highveld, while South Africa is also regarded as the 9th largest anthropogenic sulphur (S) emitting country. Notwithstanding the importance of South Africa with regard to nitrogen (N) and S emissions, very limited data has been published on the chemical composition of wet deposition for this region. This paper presents the concentrations of sodium (Na+), ammonium (NH4+), potassium (K+), calcium (Ca2+), magnesium (Mg2+), nitrate (NO3-), chloride (Cl-), sulphate (SO42-) and water-soluble organic acids (OA) in the wet deposition samples collected between 2009 and 2014 at four South African IDAF (IGAC DEBITS Africa) sites, which are regarded as regional representatives of the north-eastern interior. Also, wet deposition fluxes of the ten ions are calculated and presented in this paper. The results show that the total ionic concentrations and fluxes of wet deposition were much higher at the two sites closer to anthropogenic emissions, while the pH of wet deposition at these two sites were lower compared to that of the two sites that were less impacted by anthropogenic emissions. . The major sources of the ten ions included marine, terrigenous (crust), fossil fuel combustion, agriculture and biomass burning. Significant contributions from fossil fuel combustion were determined for the two sites in close proximity to anthropogenic source regions. The results of back trajectory analysis, however, did indicate that the two remote sites are also affected by air masses passing over the source region through anti-cyclonic recirculation. The largest contributions at the two sites distant from the anthropogenic source regions were marine sources, while the impact of biomass burning was also more significant at the remote sites. Comparison to previous wet

  15. A framework to spatially cluster air pollution monitoring sites in US based on the PM2.5 composition

    PubMed Central

    Austin, Elena; Coull, Brent A.; Zanobetti, Antonella; Koutrakis, Petros

    2013-01-01

    Background Heterogeneity in the response to PM2.5 is hypothesized to be related to differences in particle composition across monitoring sites which reflect differences in source types as well as climatic and topographic conditions impacting different geographic locations. Identifying spatial patterns in particle composition is a multivariate problem that requires novel methodologies. Objectives Use cluster analysis methods to identify spatial patterns in PM2.5 composition. Verify that the resulting clusters are distinct and informative. Methods 109 monitoring sites with 75% reported speciation data during the period 2003–2008 were selected. These sites were categorized based on their average PM2.5 composition over the study period using k-means cluster analysis. The obtained clusters were validated and characterized based on their physico-chemical characteristics, geographic locations, emissions profiles, population density and proximity to major emission sources. Results Overall 31 clusters were identified. These include 21 clusters with 2 or more sites which were further grouped into 4 main types using hierarchical clustering. The resulting groupings are chemically meaningful and represent broad differences in emissions. The remaining clusters, encompassing single sites, were characterized based on their particle composition and geographic location. Conclusions The framework presented here provides a novel tool which can be used to identify and further classify sites based on their PM2.5 composition. The solution presented is fairly robust and yielded groupings that were meaningful in the context of air-pollution research. PMID:23850585

  16. Addendum to Composite Analysis for Low-Level Waste Disposal in the 200 Area Plateau of the Hanford Site

    SciTech Connect

    Bergeron, Marcel P.; Freeman, Eugene J.; Wurstner, Signe K.; Kincaid, Charles T.; Coony, Mike M.; Strenge, Dennis L.; Aaberg, Rosanne L.; Eslinger, Paul W.

    2001-09-28

    This report summarizes efforts to complete an addendum analysis to the first iteration of the Composite Analysis for Low-Level Waste Disposal in the 200 Area Plateau of the Hanford Site (Composite Analysis). This document describes the background and performance objectives of the Composite Analysis and this addendum analysis. The methods used, results, and conclusions for this Addendum analysis are summarized, and recommendations are made for work to be undertaken in anticipation of a second analysis.

  17. Unsaturated zone carbon dioxide flux, mixing, and isotopic composition at the USGS Amargosa Desert Research Site

    NASA Astrophysics Data System (ADS)

    Conaway, C. H.; Thordsen, J. J.; Thomas, B.; Haase, K.; Moreo, M. T.; Walvoord, M. A.; Andraski, B. J.; Stonestrom, D. A.

    2015-12-01

    Elevated concentrations of tritium, radiocarbon, and volatile organic compounds at the USGS Amargosa Desert Research Site, adjacent to a low-level radioactive waste disposal facility, have stimulated research on factors affecting transport of these contaminants. This research includes an examination of unsaturated zone carbon dioxide (CO2) fluxes, mixing, and isotopic composition, which can help in understanding these factors. In late April 2015 we collected 76 soil-gas samples in multi-layer foil bags from existing 1.5-m deep tubes, both inside and outside the low-level waste area, as well as from two 110-m-deep multilevel gas-sampling boreholes and a distant background site. These samples were analyzed for carbon dioxide concentration and isotopic composition by direct injection into a cavity ring-down spectrometer. Graphical analysis of results indicates mixing of CO2 characteristic of the root zone (δ13C -18 ‰ VPDB), deep soil gas of the capillary fringe (-20‰), and CO2 produced by microbial respiration of organic matter disposed in the waste area trenches (-28‰). Land-surface boundary conditions are being constrained by the application of a novel non-dispersive infrared sensor and traditional concentration and flux measurements, including discrete CO2 flux data using a gas chamber method to complement continuous data from surface- and tower-based CO2 sensors. These results shed light on radionuclide and VOC mobilization and transport mechanisms from this and similar waste disposal facilities.

  18. Influence of cultivation site on sesquiterpene lactone composition of forage chicory (Cichorium intybus L.).

    PubMed

    Foster, Joyce G; Clapham, William M; Belesky, David P; Labreveux, Maria; Hall, Marvin H; Sanderson, Matt A

    2006-03-08

    The forage potential of chicory (Cichorium intybus L.) has not been realized in southern West Virginia (WV) because ruminants are reluctant to consume the herbage. Chicory contains bitter sesquiterpene lactones that can adversely impact palatability. This study was undertaken to determine whether sesquiterpene lactone concentrations in chicory grown in southern WV differ from those in chicory grown in central Pennsylvania (PA) where chicory is grazed readily. Herbage was collected in 1997 and 1998 from cultivars Grasslands Puna (Puna), INIA le Lacerta (Lacerta), and Forage Feast established at research sites near State College, PA, and Beckley, WV. The total concentration of sesquiterpene lactones in WV-grown cultivars was 0.58% (dry matter basis) in Puna, 0.59% in Lacerta, and 0.79% in Forage Feast in 1997 and ranged from 1.03 (Lacerta) to 1.52% (Forage Feast) in 1998. In PA-grown cultivars, sesquiterpene lactones represented 0.16 (Puna), 0.18 (Lacerta), and 0.27% (Forage Feast) of the forage dry matter in 1997 and ranged from 0.32 (Lacerta) to 0.55% (Forage Feast) in 1998. Concentrations of lactucin, lactucopicrin, and total sesquiterpene lactones in Forage Feast exceeded those in the other cultivars grown at the same site. The lowest concentrations of lactucopicrin and total sesquiterpene lactones observed among WV-grown cultivars were higher (2-fold or more) than the highest concentrations present in cultivars grown the same year in PA. Mineral analyses of soils from the two cultivation sites indicate that P availability may influence sesquiterpene lactone composition of chicory herbage. Results provide a foundation for future studies of environmental effects on sesquiterpene lactone composition and palatability of chicory herbage.

  19. Multi-stage metasomatism revealed by trace element and Li isotope distributions in minerals of peridotite xenoliths from Allègre volcano (French Massif Central)

    NASA Astrophysics Data System (ADS)

    Gu, Xiaoyan; Deloule, Etienne; France, Lydéric; Ingrin, Jannick

    2016-11-01

    The modal, chemical, and isotopic compositions of mantle peridotite are largely modified by metasomatic processes, which may affect them repeatedly. Xenoliths are commonly used to characterize those metasomatic processes along with the structure, and chemical and isotopic compositions of mantle domains. Nevertheless, the original mantle signatures born by mantle xenoliths are potentially obscured by the interactions occurring between the host magma and the xenolith itself. Here we attempt to identify to which degree the original Li content and isotopic composition, as well as other trace element contents of mantle xenoliths, can be modified by interaction with the host magma. Peridotite xenoliths that have suffered extensive exchange with the entraining magma were sampled in the solidified lava lake of Allègre, Southern French Massif Central, in order to decipher the signature related to peridotite-melt interaction, and to further unravel the evolution of the sub-continental lithospheric mantle. In-situ trace element analyses of clinopyroxene (Cpx) were performed via LA-ICP-MS, and the Li content and isotopic composition of pyroxene and olivine (Ol) via SIMS. Negative HFSE anomalies (Ti/Eu ratios as low as 437) and markedly high LREE/HREE ratios ((La/Yb)N as high as 79) are characteristic of mantle metasomatism at depth. Lithium isotope systematics indicates that at least two different metasomatic events affected the peridotite. Exceptionally high Li contents in Cpx (up to 50 ppm) and slight Li enrichment of Ol rims are ascribed to diffusive Li influx with a positive δ7Li value (+ 3.2‰) from the host magma after entrainment. Conversely, Ol cores preserve extremely light Li isotopic compositions (δ7Li as low as - 25‰) with high Li contents (up to 4.4 ppm) compared to normal mantle, indicating a metasomatic event that occurred before xenolith entrainment. The negative δ7Li signature of this early metasomatism may be related to subduction-related fluids

  20. Seven-site versus three-site method of body composition using BodyMetrix ultrasound compared to dual-energy X-ray absorptiometry.

    PubMed

    Baranauskas, Marissa N; Johnson, Kelly E; Juvancic-Heltzel, Judith A; Kappler, Rachele M; Richardson, Laura; Jamieson, Scott; Otterstetter, Ronald

    2015-10-22

    Obesity is a steadily growing epidemic affecting all segments of the population including college-aged students. The weight gain that is evidenced amid the transitional stage of college years increases the risks associated with cardiovascular and metabolic diseases. The BodyMetrix® BX-2000 (ULTRA) using a seven-site method has been evaluated against dual-energy X-ray absorptiometry (DXA) for estimation of body composition, which has yielded conflicting results. To date, no studies have compared the three-site method Jackson and Pollock three-site method to DXA.

  1. HANFORD SITE LOW EXPOSURE PIPELINE REPAIR USING A NON-METALLIC COMPOSITE SYSTEM

    SciTech Connect

    HUTH RJ

    2009-11-12

    At the Department of Energy, Richland Operations (DOE-RL) Hanford site in eastern Washington, a 350 mm (14 inch) diameter high density polyethylene (HDPE) pump recirculation pipeline failed at a bonded joint adjacent to a radiologically and chemically contaminated groundwater storage basin. The responsible DOE-RL contractor, CH2MHill Plateau Remediation Company, applied a fiberglass reinforced plastic (composite) field repair system to the failed joint. The system was devised specifically for the HDPE pipe repair at the Hanford site, and had not been used on this type of plastic piping previously. This paper introduces the pipe failure scenario, describes the options considered for repair and discusses the ultimate resolution of the problem. The failed pipeline was successfully returned to service with minimal impact on waste water treatment plant operating capacity. Additionally, radiological and chemical exposures to facility personnel were maintained as low as reasonably achievable (ALARA). The repair is considered a success for the near term, and future monitoring will prove whether the repair can be considered for long term service and as a viable alternative for similar piping failures at the Hanford site.

  2. Evaluation of distance maps from fast GRE MRI as a tool to study the knee joint space

    NASA Astrophysics Data System (ADS)

    Tamez-Pena, Jose G.; Lerner, Amy L.; Yao, Jiang; Salo, Arthur D.; Totterman, Saara

    2003-05-01

    A new three-dimensional (3D) method of evaluating the joint space from fast GRE MRI has been developed that allows the reconstruction of the two dimensional (2D) distance map between the femur and the tibia bone plates. This method uses the MRI data, an automated 3D segmentation, and an unsupervised joint space extraction algorithm that identify the medial and lateral compartments of the knee joint. The extracted medial and lateral compartments of the tibia-femur joint space were analyzed by 2D distance maps, where visual as well quantitative information was extracted. This method was applied to study the dynamic behavior of the knee joint space under axial load. Three healthy volunteers' knees were imaged using fast GRE sequences in a clinical scanner under unloaded (normal) conditions and with an axial load that mimics the person's standing load. Furthermore, one volunteer's knee was imaged at four regular time intervals while the load was applied and at four regular intervals without load. The results show that changes of 50 microns in the average distance between bones can be measured and that normal axial loads reduce the joint space width significantly and can be detected by this method.

  3. Bulk production and evaluation of high specific activity 186gRe for cancer therapy using enriched 186WO3 targets in a proton beam

    DOE PAGES

    Mastren, Tara; Radchenko, Valery; Bach, Hong Thu; ...

    2017-03-03

    Rhenium-186 g (t1/2 = 3.72 d) is a β– emitting isotope suitable for theranostic applications. Current production methods rely on reactor production by way of the reaction 185Re(n,γ)186gRe, which results in low specific activities limiting its use for cancer therapy. Production via charged particle activation of enriched 186W results in a 186gRe product with a much specific activity, allowing it to be used more broadly for targeted radiotherapy applications. Furthermore, this targets the unmet clinical need for more efficient radiotherapeutics.

  4. A Composite Chronology of Earthquakes From the Bidart fan Paleoseismic Site, San Andreas Fault, California

    NASA Astrophysics Data System (ADS)

    Grant, L. B.; Arrowsmith, J. R.; Akciz, S.

    2005-12-01

    Chronologies of earthquakes spanning at least ten ruptures at multiple sites are required for developing robust models of fault behavior and forecasts of future earthquakes. Such a long chronology can be obtained by placing multiple trenches across the San Andreas fault at the Bidart alluvial fan paleoseismic site in the Carrizo Plain to capture the spatio-temporal record of earthquakes created by the interplay of surface rupture and spatially varying deposition. Exposures from one trench reveal evidence of at least 6 and probably 7 earthquakes since 3000 BP. Evidence of 7 earthquakes since 2200 BP has been interpreted from exposures in 3 other trenches. Analysis of exposures from two new trenches is in progress. Excavations reveal alternating sequences of depositional preservation and gaps in the record of earthquakes. The "gaps" are massive featureless zones caused by bioturbation of the fan surface while that portion of the fan was depositionally inactive. When the depositional record of 4 trenches is combined, it yields a composite chronology of at least10 surface ruptures over the last 3000 years, for a minimum average recurrence interval of 300 years if the most recent event exposed in all trenches is assumed to be the 1857 Fort Tejon earthquake. So far, the uncertainty in dates of pre-1857 ruptures ranges from decades to millennia, and at least 5 of the 10 recognized earthquakes are obscured by depositional gaps at one of the trench sites. Therefore, synchroneity of ruptures at different trench sites is difficult to establish, and there is the possibility that the existing record contains more than 10 earthquakes and/or additional ruptures may have occurred that are not preserved by deposition.

  5. A Descriptive Study of Universities' Use of "GRE"® General Test Scores in Awarding Fellowships to First-Year Doctoral Students. ETS GRE® Board Research Report. ETS GRE®-14-04. ETS Research Report. RR-14-27

    ERIC Educational Resources Information Center

    Rock, JoAnn Leah; Adler, Rachel M.

    2014-01-01

    The purpose of this study was to investigate the ways in which universities use the "GRE"® General Test scores to award merit-based fellowships to first-year graduate students in doctoral programs. While GRE use in fellowship award decisions is a common practice, there is very little validity evidence to support its use in this context.…

  6. A Study of the Use of the "e-rater"® Scoring Engine for the Analytical Writing Measure of the "GRE"® revised General Test. Research Report. ETS RR-14-24

    ERIC Educational Resources Information Center

    Breyer, F. Jay; Attali, Yigal; Williamson, David M.; Ridolfi-McCulla, Laura; Ramineni, Chaitanya; Duchnowski, Matthew; Harris, April

    2014-01-01

    In this research, we investigated the feasibility of implementing the "e-rater"® scoring engine as a check score in place of all-human scoring for the "Graduate Record Examinations"® ("GRE"®) revised General Test (rGRE) Analytical Writing measure. This report provides the scientific basis for the use of e-rater as a…

  7. Conservation of genetic information: a code for site-specific DNA recognition.

    PubMed Central

    Harris, L F; Sullivan, M R; Hickok, D F

    1993-01-01

    We present findings of genetic information conservation between the glucocorticoid response element (GRE) DNA and the cDNA encoding the glucocorticoid receptor (GR) DNA-binding domain (DBD). The regions of nucleotide sub-sequence similarity to the GRE in the GR DBD occur specifically at nucleotide sequences on the ends of exons 3,4, and 5 at their splice junction sites. These sequences encode the DNA recognition helix on exon 3, a beta-strand on exon 4, and a putative alpha-helix on exon 5, respectively. The nucleotide sequence of exon 5 that encodes the putative alpha-helix located on the carboxyl terminus of the GR DBD shares sequence similarity with the flanking nucleotide regions of the GRE. We generated a computer model of the GR DBD using atomic coordinates derived from nuclear magnetic resonance spectroscopy to which we attached the exon 5-encoded putative alpha-helix. We docked this GR DBD structure at the 39-base-pair nucleotide sequence containing the GRE binding site and flanking nucleotides, which contained conserved genetic information. We observed that amino acids of the DNA recognition helix, the beta-strand, and the putative alpha-helix are spatially aligned with trinucleotides identical to their cognate codons within the GRE and its flanking nucleotides. Images Fig. 3 PMID:8516297

  8. Receptor modelling of both particle composition and size distribution from a background site in London, UK

    NASA Astrophysics Data System (ADS)

    Beddows, D. C. S.; Harrison, R. M.; Green, D. C.; Fuller, G. W.

    2015-09-01

    Positive matrix factorisation (PMF) analysis was applied to PM10 chemical composition and particle number size distribution (NSD) data measured at an urban background site (North Kensington) in London, UK, for the whole of 2011 and 2012. The PMF analyses for these 2 years revealed six and four factors respectively which described seven sources or aerosol types. These included nucleation, traffic, urban background, secondary, fuel oil, marine and non-exhaust/crustal sources. Urban background, secondary and traffic sources were identified by both the chemical composition and particle NSD analysis, but a nucleation source was identified only from the particle NSD data set. Analysis of the PM10 chemical composition data set revealed fuel oil, marine, non-exhaust traffic/crustal sources which were not identified from the NSD data. The two methods appear to be complementary, as the analysis of the PM10 chemical composition data is able to distinguish components contributing largely to particle mass, whereas the number particle size distribution data set - although limited to detecting sources of particles below the diameter upper limit of the SMPS (604 nm) - is more effective for identifying components making an appreciable contribution to particle number. Analysis was also conducted on the combined chemical composition and NSD data set, revealing five factors representing urban background, nucleation, secondary, aged marine and traffic sources. However, the combined analysis appears not to offer any additional power to discriminate sources above that of the aggregate of the two separate PMF analyses. Day-of-the-week and month-of-the-year associations of the factors proved consistent with their assignment to source categories, and bivariate polar plots which examined the wind directional and wind speed association of the different factors also proved highly consistent with their inferred sources. Source attribution according to the air mass back trajectory showed, as

  9. Factors, origin and sources affecting PM1 concentrations and composition at an urban background site

    NASA Astrophysics Data System (ADS)

    Squizzato, Stefania; Masiol, Mauro; Agostini, Chiara; Visin, Flavia; Formenton, Gianni; Harrison, Roy M.; Rampazzo, Giancarlo

    2016-11-01

    PM1 is widely believed to provide better information on the anthropogenic fraction of particulate matter pollution than PM2.5. However, data on PM1 are still limited in Europe as well as comprehensive information about its chemical composition and source apportionment and this gap is more evident in the pollution hot-spots still remaining in Europe, such as the Po Valley (Northern Italy). Elemental and organic carbon, 7 water soluble inorganic ions and 17 elements were quantified in 117 PM1 samples collected at an urban background site in Venice-Mestre, a large city located in the eastern Po Valley, during winter (December 2013-February 2014) and summer (May-July 2014) periods. Results show a strong seasonality for PM1 mass concentration (averages ranging from 6 ± 2 in summer to 34 ± 24 μg m- 3 in winter) and for most of the analysed species. Components mainly related to road traffic, residential heating, biomass burning and secondary inorganic aerosol (ammonium nitrate) reached their highest levels in winter, while mineral dust and marine components were elevated in summer. PMF analysis revealed 7 potential sources. Secondary inorganic aerosol (33%) and biomass burning (33%) are the major contributor in winter followed by EC-primary emissions (16%), aged sulphate (6%), road traffic (7%), fossil fuel combustion (%) and marine aerosol (3%). During summer, these sources account for 12%, 14%, 20%, 22%, 8%, 14% and 10%, respectively. Some PM1 sources are located near the sampling site (residential area, traffic road, industrial area) but a major contribution of long range transport is observed when high pollution events occur. The results give useful insights into PM1 composition in an urban area and chemical profiles of sources helpful in the interpretation of receptor model results.

  10. Motif types, motif locations and base composition patterns around the RNA polyadenylation site in microorganisms, plants and animals

    PubMed Central

    2014-01-01

    Background The polyadenylation of RNA is critical for gene functioning, but the conserved sequence motifs (often called signal or signature motifs), motif locations and abundances, and base composition patterns around mRNA polyadenylation [poly(A)] sites are still uncharacterized in most species. The evolutionary tendency for poly(A) site selection is still largely unknown. Results We analyzed the poly(A) site regions of 31 species or phyla. Different groups of species showed different poly(A) signal motifs: UUACUU at the poly(A) site in the parasite Trypanosoma cruzi; UGUAAC (approximately 13 bases upstream of the site) in the alga Chlamydomonas reinhardtii; UGUUUG (or UGUUUGUU) at mainly the fourth base downstream of the poly(A) site in the parasite Blastocystis hominis; and AAUAAA at approximately 16 bases and approximately 19 bases upstream of the poly(A) site in animals and plants, respectively. Polyadenylation signal motifs are usually several hundred times more abundant around poly(A) sites than in whole genomes. These predominant motifs usually had very specific locations, whether upstream of, at, or downstream of poly(A) sites, depending on the species or phylum. The poly(A) site was usually an adenosine (A) in all analyzed species except for B. hominis, and there was weak A predominance in C. reinhardtii. Fungi, animals, plants, and the protist Phytophthora infestans shared a general base abundance pattern (or base composition pattern) of “U-rich—A-rich—U-rich—Poly(A) site—U-rich regions”, or U-A-U-A-U for short, with some variation for each kingdom or subkingdom. Conclusion This study identified the poly(A) signal motifs, motif locations, and base composition patterns around mRNA poly(A) sites in protists, fungi, plants, and animals and provided insight into poly(A) site evolution. PMID:25052519

  11. Chemical composition of core samples from Newark Basin, a potential carbon sequestration site

    NASA Astrophysics Data System (ADS)

    Seltzer, A. M.; Yang, Q.; Goldberg, D.

    2012-12-01

    Injection of carbon dioxide into deep saline aquifers has been identified as a promising mitigation option of greenhouse gases, the successful management of which is considered to be one of the most urgent and important challenges. Given the high energy production in the New York metropolitan area, the Newark Basin region is considered to be a potential future sequestration site. However, the risk of an upward leak of sequestered CO2, especially to a shallow drinking water aquifer, is a key concern facing geological sequestration as a safe and viable mitigation option. In this study, we measured the chemical composition of 25 cores from various depths throughout Newark Basin as a precursor for an ex situ incubation experiment using these rock samples and aquifer water to simulate a leak event. Inductively coupled plasma mass spectrometry analysis of microwave-assisted digested rock powders and X-ray fluorescence analysis of the rock powders were conducted to obtain the concentrations of major and trace elements. Most of the major and trace elements show wide concentration ranges at one to two orders of magnitude. Understanding the chemical composition of these Newark Basin core samples is important not only for characterizing materials used for the later lab incubation, but also for gaining a broader understanding of the chemistry of the Newark Basin and profiling the region according to the varying risks associated with a leak of sequestered CO2 to a drinking water aquifer.

  12. Bacterial community composition of chronic periodontitis and novel oral sampling sites for detecting disease indicators

    PubMed Central

    2014-01-01

    Background Periodontitis is an infectious and inflammatory disease of polymicrobial etiology that can lead to the destruction of bones and tissues that support the teeth. The management of chronic periodontitis (CP) relies heavily on elimination or at least control of known pathogenic consortia associated with the disease. Until now, microbial plaque obtained from the subgingival (SubG) sites has been the primary focus for bacterial community analysis using deep sequencing. In addition to the use of SubG plaque, here, we investigated whether plaque obtained from supragingival (SupG) and tongue dorsum sites can serve as alternatives for monitoring CP-associated bacterial biomarkers. Results Using SubG, SupG, and tongue plaque DNA from 11 healthy and 13 diseased subjects, we sequenced V3 regions (approximately 200 bases) of the 16S rRNA gene using Illumina sequencing. After quality filtering, approximately 4.1 million sequences were collapsed into operational taxonomic units (OTUs; sequence identity cutoff of >97%) that were classified to a total of 19 phyla spanning 114 genera. Bacterial community diversity and overall composition was not affected by health or disease, and multiresponse permutation procedure (MRPP) on Bray-Curtis distance measures only supported weakly distinct bacterial communities in SubG and tongue plaque depending on health or disease status (P < 0.05). Nonetheless, in SubG and tongue sites, the relative abundance of Firmicutes was increased significantly from health to disease and members of Synergistetes were found in higher abundance across all sites in disease. Taxa indicative of CP were identified in all three locations (for example, Treponema denticola, Porphyromonas gingivalis, Synergistes oral taxa 362 and 363). Conclusions For the first time, this study demonstrates that SupG and tongue dorsum plaque can serve as alternative sources for detecting and enumerating known and novel bacterial biomarkers of CP. This finding is clinically

  13. Impact of wildfires on size-resolved aerosol composition at a coastal California site

    NASA Astrophysics Data System (ADS)

    Maudlin, L. C.; Wang, Z.; Jonsson, H. H.; Sorooshian, A.

    2015-10-01

    Size-resolved aerosol composition measurements were conducted at a coastal site in central California during the Nucleation in California Experiment (NiCE) between July and August of 2013. The site is just east of ship and marine emission sources and is also influenced by continental pollution and wildfires, such as those near the California-Oregon border which occurred near the end of NiCE. Two micro-orifice uniform deposit impactors (MOUDIs) were used, and water-soluble and elemental compositions were measured. The five most abundant water-soluble species (in decreasing order) were chloride, sodium, non-sea salt (nss) sulfate, ammonium, and nitrate. During wildfire periods, nss K mass concentrations were not enhanced as strongly as other species in the sub-micrometer stages and even decreased in the super-micrometer stages; species other than nss K are more reliable tracers for biomass burning in this region. Chloride levels were reduced in the fire sets likely due to chloride depletion by inorganic and organic acids that exhibited elevated levels in transported plumes. During wildfire periods, the mass size distribution of most dicarboxylic acids changed from unimodal to bimodal with peaks in the 0.32 μm and 1.0-1.8 μm stages. Furthermore, sulfate's peak concentration shifted from the 0.32 μm to 0.56 μm stage, and nitrate also shifted to larger sizes (1.0 μm to 1.8-3.2 μm stages). Mass concentrations of numerous soil tracer species (e.g., Si, Fe) were strongly enhanced in samples influenced by wildfires, especially in the sub-micrometer range. Airborne cloud water data confirm that soil species were associated with fire plumes transported south along the coast. In the absence of biomass burning, cloud condensation nuclei (CCN) composition is dominated by nss sulfate and ammonium, and the water-soluble organic fraction is dominated by methanesulfonate, whereas for the samples influenced by wildfires, ammonium becomes the dominant overall species, and

  14. Gender and Ethnic Differences among Science and Engineering Majors: Experiences, Achievements, and Expectations. GRE Board Research Report No. 92-03R.

    ERIC Educational Resources Information Center

    Grandy, Jerilee

    Concern over the under representation of women and minorities in the natural sciences and engineering led to the research reported in this document. The project surveyed a stratified sample of 1,651 college seniors who registered to take the Graduate Record Examination (GRE) and who were majoring in natural sciences, mathematics, computer…

  15. Evaluation of the "e-rater"® Scoring Engine for the "GRE"® Issue and Argument Prompts. Research Report. ETS RR-12-02

    ERIC Educational Resources Information Center

    Ramineni, Chaitanya; Trapani, Catherine S.; Williamson, David M.; Davey, Tim; Bridgeman, Brent

    2012-01-01

    Automated scoring models for the "e-rater"® scoring engine were built and evaluated for the "GRE"® argument and issue-writing tasks. Prompt-specific, generic, and generic with prompt-specific intercept scoring models were built and evaluation statistics such as weighted kappas, Pearson correlations, standardized difference in…

  16. MO-G-17A-03: MR-Based Cortical Bone Segmentation for PET Attenuation Correction with a Non-UTE 3D Fast GRE Sequence

    SciTech Connect

    Ai, H; Pan, T; Hwang, K

    2014-06-15

    Purpose: To determine the feasibility of identifying cortical bone on MR images with a short-TE 3D fast-GRE sequence for attenuation correction of PET data in PET/MR. Methods: A water-fat-bone phantom was constructed with two pieces of beef shank. MR scans were performed on a 3T MR scanner (GE Discovery™ MR750). A 3D GRE sequence was first employed to measure the level of residual signal in cortical bone (TE{sub 1}/TE{sub 2}/TE{sub 3}=2.2/4.4/6.6ms, TR=20ms, flip angle=25°). For cortical bone segmentation, a 3D fast-GRE sequence (TE/TR=0.7/1.9ms, acquisition voxel size=2.5×2.5×3mm{sup 3}) was implemented along with a 3D Dixon sequence (TE{sub 1}/TE{sub 2}/TR=1.2/2.3/4.0ms, acquisition voxel size=1.25×1.25×3mm{sup 3}) for water/fat imaging. Flip angle (10°), acquisition bandwidth (250kHz), FOV (480×480×144mm{sup 3}) and reconstructed voxel size (0.94×0.94×1.5mm{sup 3}) were kept the same for both sequences. Soft tissue and fat tissue were first segmented on the reconstructed water/fat image. A tissue mask was created by combining the segmented water/fat masks, which was then applied on the fast-GRE image (MRFGRE). A second mask was created to remove the Gibbs artifacts present in regions in close vicinity to the phantom. MRFGRE data was smoothed with a 3D anisotropic diffusion filter for noise reduction, after which cortical bone and air was separated using a threshold determined from the histogram. Results: There is signal in the cortical bone region in the 3D GRE images, indicating the possibility of separating cortical bone and air based on signal intensity from short-TE MR image. The acquisition time for the 3D fast-GRE sequence was 17s, which can be reduced to less than 10s with parallel imaging. The attenuation image created from water-fat-bone segmentation is visually similar compared to reference CT. Conclusion: Cortical bone and air can be separated based on intensity in MR image with a short-TE 3D fast-GRE sequence. Further research is required

  17. Floristic composition, biomass, and aboveground net plant production in grazed and protected sites in a mountain grassland of central Argentina

    NASA Astrophysics Data System (ADS)

    Pucheta, Eduardo; Cabido, Marcelo; Díaz, Sandra; Funes, Guillermo

    1998-04-01

    Changes in plant community composition, diversity, aboveground biomass, and aboveground net primary production (ANPP) of different plant growth-forms were assessed in sites protected from livestock grazing for 2, 4, and 15 years, and in a heavily-grazed site. Species richness was maximum at the grazed site and decreased significantly after 4 years of protection. Diversity decreased significantly only after 15 years of protection. No alien or weedy species were found at grazed or protected sites. Grazing exclusion produced a shift from grazing-tolerant or grazing-avoiding species with a graminoid or prostrate growth-form to taller species with a tall tussock growth-form. Grazing produced a 33% decrease in standing biomass but little change in ANPP when compared to the site protected from grazing for 2 years, but important changes in both biomass and ANPP respect to the sites protected for 4 and 15 years. Consumption was near 35% of ANPP.

  18. TEPEE/GReAT (General Relativity Accuracy Test in an Einstein Elevator): Advances in the detector development

    NASA Astrophysics Data System (ADS)

    Iafolla, V.; Fiorenza, E.; Lefevre, C.; Lucchesi, D. M.; Morbidini, A.; Nozzoli, S.; Peron, R.; Persichini, M.; Reale, A.; Santoli, F.; Lorenzini, E. C.; Shapiro, I. I.; Ashenberg, J.; Bombardelli, C.; Glashow, S.

    This paper reports the development of an experiment (TEPEE/GReAT) to test the Equivalence Principle (EP) at a level of accuracy equal to (5 × 10-15), by means of a differential accelerometer free falling in a cryogenic vacuum capsule released from a stratospheric balloon. Such an accuracy requires resolving a very small signal out of the instrument's intrinsic noise and the noise associated with the instrument's motion. Imperfections in the construction of the detector introduce gravity gradient noise that it is possible to separate from the violation signal spinning the detector around an horizontal axis in order to have the EP violation signal and the gravity gradients one modulated at two different frequencies. Experimental results on prototype instruments showing high sensitivity and common mode rejection factor are shown.

  19. Fatty acid composition differences between adipose depot sites in dairy and beef steer breeds.

    PubMed

    Liu, T; Lei, Z M; Wu, J P; Brown, M A

    2015-03-01

    The objective of the study was to compare fatty acid composition of longissimus dorsi (LD) and kidney fat (KF) in Holstein steers (HS), Simmental steers (SS) and Chinese LongDong Yellow Cattle steers (CLD). All steers received the same nutrition and management but in different locations. Cattle were harvested at approximately 550 kg and fatty acid composition of longissimus dorsi and kidney fat was analyzed in samples taken after 3 days of aging. There was evidence (P < 0.05) that C18:3n6 was greater in KF than LD in CLD cattle but not in HS or SS cattle. Percentage C18:1n9, C18:2n6, C18:3n3, and n6 fatty acids were greater in LD than KF for all breeds (P < 0.05), but the difference between fat sources for n6 in CLD cattle was smaller than the other two breeds. The LD had greater percentage of polyunsaturated fatty acids (PUFA), monounsaturated fatty acids (MUFA), and a greater ratio of n6:n3 PUFAs compared to the KF in each breed (P < 0.05). The △(9)-desaturase catalytic activity index was greater in LD than in KF in each breed group (P < 0.05). Percentage cis-9, trans-11 CLA was greater in KF than LD in HS (P < 0.05) but not SS or CLD cattle. These results indicate fatty acid percentages generally differed between longissimus dorsi fat and kidney fat. Further, there was some indication that some of these differences between fatty acid deposition sites were not consistent across breed group.

  20. Organic aerosol molecular composition and gas-particle partitioning coefficients at a Mediterranean site (Corsica).

    PubMed

    Rossignol, Stéphanie; Couvidat, Florian; Rio, Caroline; Fable, Sébastien; Grignion, Guillaume; Savelli; Pailly, Olivier; Leoz-Garziandia, Eva; Doussin, Jean-Francois; Chiappini, Laura

    2016-02-01

    Molecular speciation of atmospheric organic matter was investigated during a short summer field campaign performed in a citrus fruit field in northern Corsica (June 2011). Aimed at assessing the performance on the field of newly developed analytical protocols, this work focuses on the molecular composition of both gas and particulate phases and provides an insight into partitioning behavior of the semi-volatile oxygenated fraction. Limonene ozonolysis tracers were specifically searched for, according to gas chromatography-mass spectrometry (GC-MS) data previously recorded for smog chamber experiments. A screening of other oxygenated species present in the field atmosphere was also performed. About sixty polar molecules were positively or tentatively identified in gas and/or particle phases. These molecules comprise a wide range of branched and linear, mono and di-carbonyls (C3-C7), mono and di-carboxylic acids (C3-C18), and compounds bearing up to three functionalities. Among these compounds, some can be specifically attributed to limonene oxidation and others can be related to α- or β-pinene oxidation. This provides an original snapshot of the organic matter composition at a Mediterranean site in summer. Furthermore, for compounds identified and quantified in both gaseous and particulate phases, an experimental gas/particle partitioning coefficient was determined. Several volatile products, which are not expected in the particulate phase assuming thermodynamic equilibrium, were nonetheless present in significant concentrations. Hypotheses are proposed to explain these observations, such as the possible aerosol viscosity that could hinder the theoretical equilibrium to be rapidly reached.

  1. GC-compositional strand bias around transcription start sites in plants and fungi

    PubMed Central

    Fujimori, Shigeo; Washio, Takanori; Tomita, Masaru

    2005-01-01

    Background A GC-compositional strand bias or GC-skew (=(C-G)/(C+G)), where C and G denote the numbers of cytosine and guanine residues, was recently reported near the transcription start sites (TSS) of Arabidopsis genes. However, it is unclear whether other eukaryotic species have equally prominent GC-skews, and the biological meaning of this trait remains unknown. Results Our study confirmed a significant GC-skew (C > G) in the TSS of Oryza sativa (rice) genes. The full-length cDNAs and genomic sequences from Arabidopsis and rice were compared using statistical analyses. Despite marked differences in the G+C content around the TSS in the two plants, the degrees of bias were almost identical. Although slight GC-skew peaks, including opposite skews (C < G), were detected around the TSS of genes in human and Drosophila, they were qualitatively and quantitatively different from those identified in plants. However, plant-like GC-skew in regions upstream of the translation initiation sites (TIS) in some fungi was identified following analyses of the expressed sequence tags and/or genomic sequences from other species. On the basis of our dataset, we estimated that >70 and 68% of Arabidopsis and rice genes, respectively, had a strong GC-skew (>0.33) in a 100-bp window (that is, the number of C residues was more than double the number of G residues in a +/-100-bp window around the TSS). The mean GC-skew value in the TSS of highly-expressed genes in Arabidopsis was significantly greater than that of genes with low expression levels. Many of the GC-skew peaks were preferentially located near the TSS, so we examined the potential value of GC-skew as an index for TSS identification. Our results confirm that the GC-skew can be used to assist the TSS prediction in plant genomes. Conclusion The GC-skew (C > G) around the TSS is strictly conserved between monocot and eudicot plants (ie. angiosperms in general), and a similar skew has been observed in some fungi. Highly

  2. Effects of short-term cattle exclusion on plant community composition: Prairie dog and ecological site influences

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Plant community composition is an important indicator of healthy, proper functioning rangelands. We evaluated the impacts prairie dog grazing, ecological site and short term cattle exclusion on Northern Mixed-Grass prairie near McLaughlin, SD. Modified Daubenmire frames provided canopy cover, litte...

  3. Tracking nitrous oxide emission processes at a suburban site with semicontinuous, in situ measurements of isotopic composition

    NASA Astrophysics Data System (ADS)

    Harris, Eliza; Henne, Stephan; Hüglin, Christoph; Zellweger, Christoph; Tuzson, Béla; Ibraim, Erkan; Emmenegger, Lukas; Mohn, Joachim

    2017-02-01

    The isotopic composition of atmospheric nitrous oxide (N2O) was measured semicontinuously, at ˜35 min frequency in intermittent periods of 1-6 days over one and a half years, using preconcentration coupled to a quantum cascade laser spectrometer at the suburban site of Dübendorf, Switzerland. The achieved measurement repeatability was 0.08‰, 0.11‰, and 0.10‰ for δ18O, site preference, and δ15Nbulk respectively, which is better than or equal to standard flask sampling-based isotope ratio mass spectrometry performance. The observed mean diurnal cycle reflected the buildup of N2O from isotopically light sources on an isotopically heavy tropospheric background. The measurements were used to determine the source isotopic composition, which varied significantly compared to chemical and meteorological parameters monitored at the site. FLEXPART-COSMO transport modeling in combination with modified Emissions Database for Global Atmospheric Research inventory emissions was used to model N2O mole fractions at the site. Additionally, isotopic signatures were estimated for different source categories using literature data and used to simulate N2O isotopic composition over the measurement period. The model was able to capture variability in N2O mole fraction well, but simulations of isotopic composition showed little agreement with observations. In particular, measured source isotopic composition exhibited one magnitude larger variability than simulated, clearly indicating that the range of isotopic source signatures estimated from literature significantly underestimates true variability of source signatures. Source δ18O signature was found to be the most sensitive tracer for urban/industry versus agricultural N2O. δ15Nbulk and site preference may provide more insight into microbial and chemical emission processes than partitioning of anthropogenic source categories.

  4. Technical Scope and Approach for the 2004 Composite Analysis of Low Level Waste Disposal at the Hanford Site

    SciTech Connect

    Kincaid, Charles T.; Bryce, Robert W.; Buck, John W.

    2004-07-09

    A composite analysis is required by U.S. Department of Energy (DOE) Manual 435.1-1 to ensure public safety through the management of active and planned low-level radioactive waste disposal facilities associated with the Hanford Site (DOE/HQ-Manual 435.1-1). A Composite Analysis is defined as ''a reasonably conservative assessment of the cumulative impact from active and planned low-level waste disposal facilities, and all other sources from radioactive contamination that could interact with the low-level waste disposal facility to affect the dose to future members of the public''. At the Hanford Site, a composite analysis is required for continued disposal authorization for the immobilized low-activity waste, tank waste vitrification plant melters, low level waste in the 200 East and 200 West Solid Waste Burial Grounds, and Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) waste in the Environmental Restoration Disposal Facility. The 2004 Composite Analysis will be a site-wide analysis, considering final remedial actions for the Columbia River corridor and the Central Plateau at the Hanford Site. The river corridor includes waste sites and facilities in each of the 100 Areas as well as the 300, 400, and 600 Areas. The remedial actions for the river corridor are being conducted to meet residential land use standards with the vision of the river corridor being devoted to a combination of recreation and preservation. The ''Central Plateau'' describes the region associated with operations and waste sites of the 200 Areas. DOE is developing a strategy for closure of the Central Plateau area by 2035. At the time of closure, waste management activities will shrink to a Core Zone within the Central Plateau. The Core Zone will contain the majority of Hanford's permanently disposed waste

  5. Chemical composition and mass closure of particulate matter at six urban sites in Europe

    NASA Astrophysics Data System (ADS)

    Sillanpää, Markus; Hillamo, Risto; Saarikoski, Sanna; Frey, Anna; Pennanen, Arto; Makkonen, Ulla; Spolnik, Zoya; Van Grieken, René; Braniš, Martin; Brunekreef, Bert; Chalbot, Marie-Cecile; Kuhlbusch, Thomas; Sunyer, Jordi; Kerminen, Veli-Matti; Kulmala, Markku; Salonen, Raimo O.

    The chemical composition of fine (PM 2.5) and coarse (PM 2.5-10) particulate matter was investigated in 7-week field campaigns of contrasting air pollution at six urban background sites in Europe. The campaigns were scheduled to include seasons of local public health concern due to high particulate concentrations or findings in previously conducted epidemiological studies. The sampling campaigns were carried out as follows: Duisburg/Germany October-November 2002 (autumn), Prague/Czech Republic November 2002-January 2003 (winter), Amsterdam/Netherlands January-March 2003 (winter), Helsinki/Finland March-May 2003 (spring), Barcelona/Spain March-May 2003 (spring) and Athens/Greece June-July 2003 (summer). Aerosol samples were collected in 3+4-day periods per week ( N=14) using two identical virtual impactors (VI). All the filter samples were analysed with the same instruments to obtain particulate mass, inorganic ions, total and watersoluble elements, and elemental and organic carbon content. The campaign means of PM 2.5 and PM 2.5-10 ranged from 8.3 to 30 and 5.4 to 29 μg m -3, respectively. The "wet and cool" seasons favoured a low coarse-to-fine particulate mass ratio (<1), whereas the ratio was high (>1) during the warmer and drier spring and summer campaigns. According to chemical mass closure, the major components in PM 2.5 were carbonaceous compounds (organic matter+elemental carbon), secondary inorganic ions and sea salt, whereas those in PM 2.5-10 were soil-derived compounds, carbonaceous compounds, sea salt and nitrate. The major and minor components together accounted for 79-106% and 77-96% of the gravimetrically measured PM 2.5 and PM 2.5-10 mass, respectively. In conclusion, the measured PM 2.5 and PM 2.5-10 in the campaigns could be reconstructed to a large extent with the help of harmonized particulate sampling and analysis of the selected chemical constituents. The health significance of the observed differences in chemical composition and emission

  6. Composition and Size Characteristics of Aerosols at Gosan Super-site

    NASA Astrophysics Data System (ADS)

    Lim, S.; Lee, M.; Lee, G.; Kang, K.

    2008-12-01

    To examine the characteristics of size and compositions of particles at Gosan, ABC and ACE-Asia Super site, PM10, PM2.5 and PM1.0 aerosols were collected using Cyclone from August 2007 to June 2008. The 37mm Teflon filters and Quarts filters were used for water-soluble ions, and elemental ad organic carbon analysis. In total, 37 sets of daily sample were obtained and analyzed. The average (minimum, maximum) mass concentrations of PM10, PM2.5 and PM1.0 were respectably 29.0(7.5, 69.8), 18.2(3.9, 52.9) and 14.2(1.3, 29.5) ug/m3, respectably. The maximum concentration of PM10 mass was the highest in May, which was mainly due to Asian dust events. On the other hand, the maximum mass of PM2.5 and PM1.0 was observed in February, which seemed to be affected by pollution plumes. The median concentration of PM2.5 mass was, however, the highest in June, which is ascribed to strong photochemical activity. The average mass concentrations of NO3-, SO42- and NH4+ were 8.87, 14.41 and 2.99 ug/m3 for PM10. 8.36, 7.23 and 4.17 ug/m3 for PM2.5. 4.41, 10.67 and 2.81 ug/m3 for PM1.0. The ratio of SO42-, NH4+ and K+ concentrations to mass decreased with PM cut-off size. However NO3- showed opposite trend. The ratios of NO3- and SO42- concentrations in PM1.0 to PM10 were greater than 0.6 and less than 0.4, respectably. The results of carbonaceous measurements will be presented in the meeting.

  7. Composite analysis for low-level waste disposal in the 200 area plateau of the Hanford Site

    SciTech Connect

    Kincaid, C.T.; Bergeron, M.P.; Cole, C.R.

    1998-03-01

    This report presents the first iteration of the Composite Analysis for Low-Level Waste Disposal in the 200 Area Plateau of the Hanford Site (Composite Analysis) prepared in response to the U.S. Department of Energy Implementation Plan for the Defense Nuclear Facility Safety Board Recommendation 94-2. The Composite Analysis is a companion document to published analyses of four active or planned low-level waste disposal actions: the solid waste burial grounds in the 200 West Area, the solid waste burial grounds in the 200 East Area, the Environmental Restoration Disposal Facility, and the disposal facilities for immobilized low-activity waste. A single Composite Analysis was prepared for the Hanford Site considering only sources on the 200 Area Plateau. The performance objectives prescribed in U.S. Department of Energy guidance for the Composite Analysis were 100 mrem in a year and examination of a lower dose (30 mrem in a year) to ensure the {open_quotes}as low as reasonably achievable{close_quotes} concept is followed. The 100 mrem in a year limit was the maximum allowable all-pathways dose for 1000 years following Hanford Site closure, which is assumed to occur in 2050. These performance objectives apply to an accessible environment defined as the area between a buffer zone surrounding an exclusive waste management area on the 200 Area Plateau, and the Columbia River. Estimating doses to hypothetical future members of the public for the Composite Analysis was a multistep process involving the estimation or simulation of inventories; waste release to the environment; migration through the vadose zone, groundwater, and atmospheric pathways; and exposure and dose. Doses were estimated for scenarios based on agriculture, residential, industrial, and recreational land use. The radionuclides included in the vadose zone and groundwater pathway analyses of future releases were carbon-14, chlorine-36, selenium-79, technetium-99, iodine-129, and uranium isotopes.

  8. Simultaneous and sequential multi-site impact response of composite laminates

    NASA Astrophysics Data System (ADS)

    Bartus, Shane D.

    The unique feature in this study was the investigation of the response of polymer composite material to impact by multiple high velocity projectiles. Energy absorption, new surface creation, and failure mechanisms from both sequential and near-simultaneous multi-site, high velocity impact were compared to assess synergistic and cumulative effects. A single-stage light-gas gun capable of launching three projectiles with controlled impact location and velocity in both near-simultaneous and sequential impact modes was developed to study these effects. Two test programs were conducted to evaluate these impact scenarios on thin S-2 glass/epoxy laminates. In the first program, the effect of laminate thickness was investigated using .30 caliber steel spherical projectiles. The material response near and above the ballistic limit at constant incident velocity was studied with respect to two and three projectile impacts. It was found that specimens subjected to sequential impact absorbed 10.1% more impact energy and exhibited increases of 23.0% (two projectile) and 10.5% (three projectile) in delamination damage over specimens subjected to simultaneous impact. The second test program involved a study assessing projectile mass effects for .50 caliber spherical Al 2O3 (3.94 g), steel (8.38 g), and tungsten carbide (16.08 g) projectiles at constant incident energy. A factor of four increase in projectile mass corresponded to 22.4% (sequential impact) and 12.8% (simultaneous impact) increases in delamination damage. Energy absorption increased 11.9% (sequential impact) and 8.7% simultaneous impact for laminates subjected to tungsten carbide projectiles over Al2O3 projectiles. Energy absorption in laminates subjected to sequential impact was 20.0% higher (average) than those impacted simultaneously. In contrast to the .30 caliber impact study, delamination damage increased 14.6% (average) for specimens subjected to simultaneous impact. In both studies, impact energy absorption

  9. Preparation of SiC f/SiC composites by the slip infiltration and transient eutectoid (SITE) process

    NASA Astrophysics Data System (ADS)

    Novak, Saša; Dražić, Goran; König, Katja; Iveković, Aljaž

    2010-04-01

    A novel ceramic processing route "SITE", composed of ceramic slip infiltration in a SiC-fibre preform and the low-temperature sintering of a SiC-based matrix using a transient eutectoid, has been introduced as an optional way of producing low-activation, SiC-based, ceramic-matrix composites for fusion applications. The matrix material's composition was developed on the basis of sintering studies using submicron and nanosized SiC powders and various low-activation precursors for the transient eutectoid secondary phase. Three different compositions of the secondary phase were investigated: SiO 2-Y 2O 3-P 2O 5, SiO 2-MgO-P 2O 5 and SiO 2-Al 2O 3-P 2O 5. The last of these resulted in the most promising material, which was obtained by sintering in controlled atmospheres at temperatures up to 1400 °C, where the SiC-fibres were prevented from losing their original properties. The matrix-material samples were characterised for their phase compositions. The SiC-fibre preform was infiltrated with the matrix material by using electrophoretic deposition. A stable and well-dispersed aqueous suspension enabled the efficient infiltration and preparation of a SiC f/SiC composite with a relatively high density. The simple and rapid SITE processing technique appears to offer a viable, low-cost alternative to the methods presently used to produce low-activation SiC f/SiC composites.

  10. Multi-site delamination detection and quantification in composites through guided wave based global-local sensing

    NASA Astrophysics Data System (ADS)

    Tian, Zhenhua; Leckey, Cara; Yu, Lingyu

    2017-02-01

    This paper presents a guided wave based global-local sensing method for rapid detection and quantification of multi-site delamination damage in large composite panels. The global-local approach uses a hybrid system consisting of a piezoelectric transducer (PZT) for generating guided waves and a non-contact scanning laser Doppler vibrometer (SLDV) for acquiring guided wave data. The global-local method is performed in two steps. First, a phased array configured of a small number of SLDV scan points (for example 10×10 points in a rectangular grid array) performs inspection over the entire plate to detect and locate damage. Local areas are identified as potential damage regions for the second step. Then high density wavefield measurements are taken over the identified areas and wavefield analysis is performed to quantitatively evaluate the damage. For the proof of concept in case with multi-site damage, the global-local approach is demonstrated on a carbon fiber reinforced polymer (CFRP) composite plate with two sites of impact-induced delamination damage. In the first step, the locations of two delamination sites are detected by the phased array method. In the second step, the delamination size and shape are evaluated using wavefield analysis. The detected delamination location, size and shape agree well with those of ultrasonic C-scan and the method led to a 93% reduction in inspection time compared to a full SLDV dense grid scan.

  11. Effect of Geopolymer filler in Glass Reinforced Epoxy (GRE) Pipe for Piping Application: Mechanical Properties

    NASA Astrophysics Data System (ADS)

    Firdaus Abu Hashim, Mohammad; Bakri Abdullah, Mohd Mustafa Al; Mohd Ruzaidi Ghazali, Che; Hussin, Kamarudin; Binhussain, Mohammed

    2016-06-01

    The present work is aimed to carry out the effect of geopolymer material which is fly ash as filler in the glass reinforced epoxy pipe on the micro structure of fly ash geopolymer, compression properties, and bulk density using the filament winding method. Conventional glass reinforced epoxy pipes has its own disadvantages such as high corrosion resistance at acidic environment and low strength which can be replaced by the composite pipes. Geopolymer is a type of amorphous alumino-silicate and can be synthesized by geopolymerization process. A series of glass reinforced epoxy pipe and glass reinforced epoxy pipe filled with 10 - 40 weight percentage geopolymer filler which is fly ash with 4 Molarity were prepared. Morphology of the raw material fly ash and fly ash based-geopolymer surface was characterized using scanning electron microscopy. It was found that the additions of fly ash at the beginning with 10 wt% are showing higher compressive strength than glass reinforced epoxy pipe without fly ash geopolymer filler. The compressive test of these series of samples was determined using Instron Universal Testing under compression mode. It was found that compressive strength for samples fly ash based-geopolymer filler are higher as compared to glass reinforced epoxy pipe without geopolymer filler. However, the compressive strength of glass reinforced epoxy pipe with fly ash geopolymer filler continues to decline when added to 20 wt% - 40 wt% of geopolymer filler loading. The results showed that the mixing of geopolymer materials in epoxy system can be obtained in this study.

  12. Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs.

    PubMed

    Hasan, Md Mehedi; Zhou, Yuan; Lu, Xiaotian; Li, Jinyan; Song, Jiangning; Zhang, Ziding

    2015-01-01

    Prokaryotic proteins are regulated by pupylation, a type of post-translational modification that contributes to cellular function in bacterial organisms. In pupylation process, the prokaryotic ubiquitin-like protein (Pup) tagging is functionally analogous to ubiquitination in order to tag target proteins for proteasomal degradation. To date, several experimental methods have been developed to identify pupylated proteins and their pupylation sites, but these experimental methods are generally laborious and costly. Therefore, computational methods that can accurately predict potential pupylation sites based on protein sequence information are highly desirable. In this paper, a novel predictor termed as pbPUP has been developed for accurate prediction of pupylation sites. In particular, a sophisticated sequence encoding scheme [i.e. the profile-based composition of k-spaced amino acid pairs (pbCKSAAP)] is used to represent the sequence patterns and evolutionary information of the sequence fragments surrounding pupylation sites. Then, a Support Vector Machine (SVM) classifier is trained using the pbCKSAAP encoding scheme. The final pbPUP predictor achieves an AUC value of 0.849 in 10-fold cross-validation tests and outperforms other existing predictors on a comprehensive independent test dataset. The proposed method is anticipated to be a helpful computational resource for the prediction of pupylation sites. The web server and curated datasets in this study are freely available at http://protein.cau.edu.cn/pbPUP/.

  13. Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site

    SciTech Connect

    V. Yucel

    2002-09-01

    U.S. Department of Energy (DOE) Order 435.1 requires that performance assessments (PAs) and composite analyses (CAs) for low-level waste (LLW) disposal facilities be maintained by the field offices. This plan describes the activities to be performed in maintaining the Performance Assessment (PA) and Composite Analysis (CA) for the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) at the Nevada Test Site (NTS). The Disposal Authorization Statement (DAS) for the continuing operations of a LLW facility at the DOE complex specifies the conditions for operations based on approval of a PA and CA, and requires the facility to implement a maintenance program to assure that these conditions will remain protective of the public health and the environment in the future. The goal of the maintenance program is to provide that assurance. The maintenance process is an iterative one in which changing conditions may result in a revision of PA and CA; the revised PA and CA may impose a different set of conditions for facility operation, closure, and postclosure. The maintenance process includes managing uncertainty, performing annual reviews, submitting annual summary reports to DOE Headquarters (DOE/HQ), carrying out special analyses, and revising the PAs and CAs, if necessary. Management of uncertainty is an essential component of the maintenance program because results of the original PAs and CAs are understood to be based on uncertain assumptions about the conceptual models; the mathematical models and parameters; and the future state of the lands, disposal facilities, and human activities. The annual reviews for the PAs include consideration of waste receipts, facility specific factors, results of monitoring, and results of research and development (R&D) activities. Likewise, results of ongoing R&D, changes in land-use planning, new information on known sources of residual radioactive materials, and identification of new sources may warrant an evaluation to determine

  14. Effects of Re-vegetation on Herbaceous Species Composition and Biological Soil Crusts Development in a Coal Mine Dumping Site

    NASA Astrophysics Data System (ADS)

    Zhao, Yang; Zhang, Peng; Hu, Yigang; Huang, Lei

    2016-02-01

    Despite the critical roles of plant species' diversity and biological soil crusts (BSCs) in arid and semi-arid ecosystems, the restoration of the diversity of herbaceous species and BSCs are rarely discussed during the process of vegetation restoration of anthropogenically damaged areas in these regions. In this study, the herbaceous plant species composition, along with the BSCs coverage and thicknesses, was investigated at six different re-vegetation type sites, and the natural vegetation site of the Heidaigou open pit coal mine in China's Inner Mongolia Autonomous Region was used as a reference. The highest total species richness (16), as well as the species richness (4.4), occurred in the Tree and Herbaceous vegetation type site. The species composition similarities between the restored sites and the reference site were shown to be very low, and ranged from 0.09 to 0.42. Also, among the restored sites, the similarities of the species were fairly high and similar, and ranged from 0.45 to 0.93. The density and height of the re-vegetated woody plants were significantly correlated with the indexes of the diversity of the species. The Shrub vegetation type site showed the greatest total coverage (80 %) of BSCs and algae crust coverage (48 %). The Shrub and Herbaceous type had the greatest thicknesses of BSCs, with as much as 3.06 mm observed, which was followed by 2.64 mm for the Shrub type. There was a significant correlation observed between the coverage of the total BSCs, and the total vegetation and herbaceous vegetation coverage, as well as between the algae crust coverage and the herbaceous vegetation coverage. It has been suggested that the re-vegetated dwarf woody plant species (such as shrubs and semi-shrubs) should be chosen for the optimal methods of the restoration of herbaceous species diversity at dumping sites, and these should be planted with low density. Furthermore, the effects of vegetation coverage on the colonization and development the BSCs

  15. Effects of Re-vegetation on Herbaceous Species Composition and Biological Soil Crusts Development in a Coal Mine Dumping Site.

    PubMed

    Zhao, Yang; Zhang, Peng; Hu, Yigang; Huang, Lei

    2016-02-01

    Despite the critical roles of plant species' diversity and biological soil crusts (BSCs) in arid and semi-arid ecosystems, the restoration of the diversity of herbaceous species and BSCs are rarely discussed during the process of vegetation restoration of anthropogenically damaged areas in these regions. In this study, the herbaceous plant species composition, along with the BSCs coverage and thicknesses, was investigated at six different re-vegetation type sites, and the natural vegetation site of the Heidaigou open pit coal mine in China's Inner Mongolia Autonomous Region was used as a reference. The highest total species richness (16), as well as the species richness (4.4), occurred in the Tree and Herbaceous vegetation type site. The species composition similarities between the restored sites and the reference site were shown to be very low, and ranged from 0.09 to 0.42. Also, among the restored sites, the similarities of the species were fairly high and similar, and ranged from 0.45 to 0.93. The density and height of the re-vegetated woody plants were significantly correlated with the indexes of the diversity of the species. The Shrub vegetation type site showed the greatest total coverage (80%) of BSCs and algae crust coverage (48%). The Shrub and Herbaceous type had the greatest thicknesses of BSCs, with as much as 3.06 mm observed, which was followed by 2.64 mm for the Shrub type. There was a significant correlation observed between the coverage of the total BSCs, and the total vegetation and herbaceous vegetation coverage, as well as between the algae crust coverage and the herbaceous vegetation coverage. It has been suggested that the re-vegetated dwarf woody plant species (such as shrubs and semi-shrubs) should be chosen for the optimal methods of the restoration of herbaceous species diversity at dumping sites, and these should be planted with low density. Furthermore, the effects of vegetation coverage on the colonization and development the BSCs

  16. Analysis of the site-specific carbon isotope composition of propane by gas source isotope ratio mass spectrometer

    NASA Astrophysics Data System (ADS)

    Piasecki, Alison; Sessions, Alex; Lawson, Michael; Ferreira, A. A.; Neto, E. V. Santos; Eiler, John M.

    2016-09-01

    Site-specific isotope ratio measurements potentially provide valuable information about the formation and degradation of complex molecules-information that is lost in conventional bulk isotopic measurements. Here we discuss the background and possible applications of such measurements, and present a technique for studying the site-specific carbon isotope composition of propane at natural abundance based on mass spectrometric analysis of the intact propane molecule and its fragment ions. We demonstrate the feasibility of this approach through measurements of mixtures of natural propane and propane synthesized with site-specific 13C enrichment, and we document the limits of precision of our technique. We show that mass balance calculations of the bulk δ13C of propane based on our site-specific measurements is generally consistent with independent constraints on bulk δ13C. We further demonstrate the accuracy of the technique, and illustrate one of its simpler applications by documenting the site-specific carbon isotope signature associated with gas phase diffusion of propane, confirming that our measurements conform to the predictions of the kinetic theory of gases. This method can be applied to propane samples of moderate size (tens of micromoles) isolated from natural gases. Thus, it provides a means of studying the site-specific stable isotope systematics of propane at natural isotope abundances on sample sizes that are readily recovered from many natural environments. This method may also serve as a model for future techniques that apply high-resolution mass spectrometry to study the site-specific isotopic distributions of larger organic molecules, with potential applications to biosynthesis, forensics and other geochemical subjects.

  17. PM2.5 ORGANIC COMPOSITION FROM SEVERAL SITES IN THE UNITED STATES

    EPA Science Inventory

    Organic constituents make up an important component of fine particulate matter (PM2.5) in ambient environments. While part of the composition of organic aerosol results from emissions of primary sources, an additional component appears to come from gas-to-particle conversion o...

  18. Constraints on the origins of hydrocarbon gas from compositions of gases at their site of origin

    USGS Publications Warehouse

    Price, L.C.; Schoell, M.

    1995-01-01

    IT is widely accepted that natural gas is formed from thermal decomposition of both oil in reservoirs and, to a lesser extent, the organic matter in shales from which the oil was derived1-6. But laboratory pyrolysis experiments on shales do not reproduce the methane-rich composition typical of most gas reservoirs7, leading to suggestions7 that other mechanisms, such as transition-metal catalysis, may be important. The discrepancy might, however, instead arise because gas (and oil) deposits have migrated from their source rocks, so that the reservoir composition might not be representative of the composition in the source rocks where the hydrocarbons were generated. To address this question, we have analysed gas samples coproduced with oils directly from a source rock (the Bakken shales, North Dakota, USA) where the local geology has prevented significant hydrocarbon migration. The methane contents of these Bakken-shale gases are much lower than that of conventional gas reservoirs, but are consistent with that from pyrolysis experiments8,9 on these shales. Thus, because these Bakken gases form with (rather than from) oils, we argue that compositional differences between gases from source rocks and conventional gas deposits result from fractionation processes occurring after hydrocarbon expulsion from the source rock.

  19. Prediction of Initiation Site of Destruction of Flat Braided Carbon Fiber Composites Using HTS-SQUID Gradiometer

    NASA Astrophysics Data System (ADS)

    Shinyama, Y.; Hatsukade, Y.; Tanaka, S.; Takai, Y.; Aly-Hassan, M. S.; Nakai, A.; Hamada, H.

    Carbon fiber reinforced polymers (CFRPs) are composite materials with lightweight and high specific strength. As the braided CFRPs have continuous carbon-fiber bundles in their longitudinal direction, they are stronger than conventional CFRPs. In this study, we applied a current-injection-based NDE method using a HTS-SQUID gradiometer to the flat braided CFRPs with and without carbon nanotubes (CNTs), and estimated conditions of the carbon fibers while applying a step-by-step tensile load to the CFRPs. From the results, a possibility to predict an initiation site of the destruction in the braided CFRPs was demonstrated.

  20. Composition and sources of carbonaceous aerosols at three contrasting sites in Hong Kong

    NASA Astrophysics Data System (ADS)

    Zheng, Mei; Hagler, Gayle S. W.; Ke, Lin; Bergin, Michael H.; Wang, Fu; Louie, Peter K. K.; Salmon, Lynn; Sin, Della W. M.; Yu, Jian Zhen; Schauer, James J.

    2006-10-01

    A significant fraction of the fine particulate matter in Hong Kong is made up of organic carbon. In order to quantitatively assess the contributions of various sources to carbonaceous aerosol in Hong Kong, a chemical mass balance (CMB) receptor model in combination with organic tracers was employed. Organic tracers including n-alkanes, polycyclic aromatic hydrocarbons (PAHs), steranes, hopanes, resin acids, cholesterol, levoglucosan, and picene in PM2.5 collected from three air monitoring sites located at roadside, urban, and rural areas in Hong Kong are quantified using gas chromatography-mass spectrometry (GC/MS) in the present study. Analyses of some overlapping species from two separate laboratories will be compared for the first time. Spatial and seasonal source contributions to organic carbon (OC) in PM2.5 from up to nine air pollution sources are assessed, including diesel engine exhaust, gasoline engine exhaust, meat cooking, cigarette smoke, biomass burning, road dust, vegetative detritus, coal combustion, and natural gas combustion. Diesel engine exhaust dominated fine organic carbon in Hong Kong (57 ± 13% at urban sites and 25 ± 2% at the rural site). Other sources that play an important role are meat cooking and biomass burning, which can account for as much as 14% of fine organic carbon. The primary sources identified by this technique explained 49%, 79%, and 94% of the measured fine organic carbon mass concentration at the rural, the urban, and the roadside sites, respectively. The unexplained fine OC is likely due to secondary organic aerosol formation.

  1. Delineation of surf scoter habitat in Chesapeake Bay, Maryland: macrobenthic and sediment composition of surf scoter feeding sites

    USGS Publications Warehouse

    Kidwell, D.M.; Perry, M.C.

    2005-01-01

    Surveys of surf scoters (Melanitta perspicillata) along the Atlantic coast of the United States have shown population declines in recent decades. The Chesapeake Bay has traditionally been a key wintering area for surf scoters. Past and present research has shown that bivalves constitute a major food item for seaducks in the Chesapeake Bay, with surf scoters feeding primarily on hooked mussel (Ischadium recurvum) and dwarf surf clam (Mulinia lateralis). Degraded water quality conditions in the Chesapeake Bay have been well documented and have been shown to greatly influence the composition of benthic communities. Large concentrations of feeding surf scoters (>500 individuals) in the Bay were determined through monthly boat surveys. Locations consistently lacking surf scoters were also determined. Macrobenthos were seasonally sampled at 3 locations containing scoters and 3 locations without scoters. A 1 kilometer square grid was superimposed over each location using GIS and sampling sites within the square were randomly chosen. Benthos were sampled at each site using SCUBA and a meter square quadrat. Biomass and size class estimates were determined for all bivalves within each kilometer square. Results indicated that scoter feeding sites contained significantly greater biomass of M. lateralis, I. recurvum, and Gemma gemma than locations where no scoters were present. Substrate differences were also detected, with scoter feeding sites being composed of a sand/shell mix while non-scoter sites consisted primarily of mud. This data indicates that surf scoters in the Chesapeake Bay are selecting areas with high densities of preferred food items, potentially maximizing there foraging energetics. In addition, two scoter feeding sites also contained a patchwork of eastern oyster (Crassostrea virginica) and oyster shell, on which much of the I. recurvum was attached. This suggests the possibility that surf scoters utilize eastern oyster habitat and the dramatic depletion of

  2. Composite Analysis for Low-Level Waste Disposal in the 200 Area Plateau of the Hanford Site, Southeast Washington

    SciTech Connect

    Kincaid, Charles T.; Bergeron, Marcel P.; Cole, Charles R.; Freshley, Mark D.; Johnson, Vernon G.; Kaplan, D. I.; Serne, R. Jeffrey; Streile, Gary P.; Strenge, Dennis L.; Thorne, Paul D.; Vail, Lance W.; Whyatt, Greg A.; Wurstner, Signe K.

    2000-03-01

    A composite analysis of low-level radioactive waste disposal and other radioactive sources was recently completed for the Hanford Site in Southeast Washington State. Impacts from source release and environmental transport were estimated for a 1000-year period following Site closure in a multi-step process involving 1) estimation of radiological inventories and release, 2) assessment of contaminant migration through the vadose zone, groundwater, and atmospheric pathways, 3) and estimation of doses. The analysis showed that most of the radionuclide inventory in past-practice liquid discharge sites and pre-1988 solid waste burial grounds on the 200 Area Plateau will be released in the first several hundred years following Hanford Site closure, well before projected releases from active and planned disposals of solid waste. The maximum predicted agricultural dose was less than 6 mrem/y in 2050 and declined thereafter. The maximum doses for the residential, industrial, and recreational scenarios, were 2.2, 0.7, and 0.04 mrem/y, respectively, and also declined after 2050.

  3. Isotopic composition of water from a mine drainage site in Creede County in south central Colorado

    NASA Astrophysics Data System (ADS)

    Michel, R. L.; Williams, M. W.; Krupicka, A.; Wireman, M.; Graves, J.

    2011-12-01

    Creede County in South Central Colorado was an active area of silver mining beginning in the early 1890s. To relieve flooding in some of the mines, the Nelson Tunnel was built in the late 1890s. This tunnel still exists and acid mine drainage from the tunnel eventually flows into the Willow Creek Watershed which eventually flows into the Upper Rio Grande. The water coming out of the tunnel is high in toxic metals and the area has become part of an EPA Superfund site in an effort to find a suitable method to remediate the metal problems. Among the approaches used in the program is the use of isotopes of water and carbon to identify sources and estimate ages of the water in the drainage. Samples were collected for analysis of isotopic ratios and tritium concentrations at a series of sites within the tunnel complex from 2008-2010. In 2009 samples were also collected for analysis of isotopes in groundwater and surface water. In 2010 sampling was expanded to include four precipitation and one snow sample. Tritium concentrations in precipitation and snowfall in 2010 ranged from 3-6 tritium units with the lowest concentration found in the snow sample. The 18O isotopic ratios in precipitation for this site ranged from an average of -8.9 o/oo in summer to about -19 o/oo in winter. The six groundwater samples collected in 2009 had an average 18O isotopic concentration of -15 o/oo and tritium concentrations ranging from 7.4-9.3 TU. These results suggest that the groundwater sampled is composed largely of a mixture of summer and winter precipitation with the latter source being dominant. The tritium concentrations in groundwater exceed recent precipitation concentrations, suggesting the presence of water from the bomb-tritium transient and an age of a decade or more for the groundwater. Eight sites in the tunnel were sampled I from 2008-2010, although not all sites were sampled every year. The sampling sites included waters seeping into the tunnel as well as the outlet water

  4. Site-selective synthesis of Janus-type metal-organic framework composites.

    PubMed

    Yadnum, Sudarat; Roche, Jérome; Lebraud, Eric; Négrier, Philippe; Garrigue, Patrick; Bradshaw, Darren; Warakulwit, Chompunuch; Limtrakul, Jumras; Kuhn, Alexander

    2014-04-07

    Herein, bipolar electrochemistry is applied in a straightforward way to the site-selective in situ synthesis of metal-organic framework (MOF) structures, which have attracted tremendous interest in recent years because of their significant application potential, ranging from sensing to gas storage and catalysis. The novelty of the presented work is that the deposit can be intentionally confined to a defined area of a substrate without using masks or templates. The intrinsic site-selectivity of bipolar electrochemistry makes it a method of choice to generate, in a highly controlled way, hybrid particles that may have different functionalities combined on the same particle. The wireless nature of electrodeposition allows the potential for mass production of such Janus-type objects.

  5. Chemical composition, mass closure and sources of atmospheric PM10 from industrial sites in Shenzhen, China.

    PubMed

    Wu, Gang; Du, Xin; Wu, Xuefang; Fu, Xiao; Kong, Shaofei; Chen, Jianhua; Wang, Zongshuang; Bai, Zhipeng

    2013-08-01

    Concentrations of atmospheric PM10 and chemical components (including twenty-one elements, nine ions, organic carbon (OC) and elemental carbon (EC)) were measured at five sites in a heavily industrial region of Shenzhen, China in 2005. Results showed that PM10 concentrations exhibited the highest values at 264 microg/m3 at the site near a harbor with the influence of harbor activities. Sulfur exhibited the highest concentrations (from 2419 to 3995 ng/m3) of all the studied elements, which may be related to the influence of coal used as fuel in this area for industrial plants. This was verified by the high mass percentages of SO4(2-), which accounted for 34.3%-39.7% of the total ions. NO3-/SO4(2-) ratios varied from 0.64-0.71, which implies coal combustion was predominant compared with vehicle emission. The anion/cation ratios range was close to 0.95, indicating anion deficiency in this region. The harbor site showed the highest OC and EC concentrations, with the influence of emission from vessels. Secondary organic carbon accounted for about 22.6%-38.7% of OC, with the highest percentage occurring at the site adjacent to a coal-fired power plant and wood plant. The mass closure model performed well in this heavily industrial region, with significant correlation obtained between chemically determined and gravimetrically measured PM10 mass. The main constituents of PM10 were found to be organic materials (30.9%-69.5%), followed by secondary inorganic aerosol (7.9%-25.0%), crustal materials (6.7%-13.8%), elemental carbon (3.5%-10.8%), sea salt (2.4%-6.2%) and trace elements (2.0%-4.9%) in this heavily industrialized region. Principal component analysis indicated that the main sources for particulate matter in this industrial region were crustal materials and coal/wood combustion, oil combustion, secondary aerosols, industrial processes and vehicle emission.

  6. Measurements of dew and fog chemical composition at a rural site

    NASA Astrophysics Data System (ADS)

    Straub, D.; Sokoloff, R.; Ressler, D.; Herckes, P.

    2012-12-01

    Liquid water in the atmosphere has been shown to play an important role in the transport, transformation, and removal of aerosol particles and soluble gases. Dew and fog represent two forms of the atmospheric aqueous phase, both of which may enhance the deposition of trace species and enable fast aqueous phase reactions. Compared to precipitation, dews and fogs have longer residence times at ground level and therefore may be strongly influenced by local sources. Fog composition measurements in the United States have been limited to relatively few locations along the East and West coasts while only a handful of studies have focused on dew composition. To extend our knowledge of dew and fog composition, measurements have been made on the campus of Susquehanna University in central Pennsylvania. Fog samples have been collected since 2007 using an automated Caltech Heated Rod Cloudwater Collector (CHRCC). Dew sampling began during the summer of 2012 using a 90 cm by 90 cm Teflon sheet mounted on a polystyrene foam panel. All samples were analyzed for pH and one of more of the following: major inorganic ions, organic acids, total organic carbon (TOC), and trace metals. Dew and fog concentrations varied widely between samples, though concentrations of most species in fog generally exceeded those in dew. The median pH was approximately 6.0 for fog and 7.0 for dew, both of which are much higher than the median value of 4.6 for precipitation in this region. Ammonium was the most abundant ionic species in the fog samples, followed by sulfate, calcium, and nitrate. Dew samples were also dominated by ammonium, though calcium was significant in some samples. Sulfate and nitrate concentrations were substantially lower in the dew samples. Formate and acetate were the most abundant organic acids in both types of samples, although those species made up much larger fraction of the total solute in the dew samples. In addition, oxalate and propionate were observed in both types of

  7. GR SUMOylation and formation of an SUMO-SMRT/NCoR1-HDAC3 repressing complex is mandatory for GC-induced IR nGRE-mediated transrepression.

    PubMed

    Hua, Guoqiang; Paulen, Laetitia; Chambon, Pierre

    2016-02-02

    Unique among the nuclear receptor superfamily, the glucocorticoid (GC) receptor (GR) can exert three distinct transcriptional regulatory functions on binding of a single natural (cortisol in human and corticosterone in mice) and synthetic [e.g., dexamethasone (Dex)] hormone. The molecular mechanisms underlying GC-induced positive GC response element [(+)GRE]-mediated activation of transcription are partially understood. In contrast, these mechanisms remain elusive for GC-induced evolutionary conserved inverted repeated negative GC response element (IR nGRE)-mediated direct transrepression and for tethered indirect transrepression that is mediated by DNA-bound NF-κB/activator protein 1 (AP1)/STAT3 activators and instrumental in GC-induced anti-inflammatory activity. We demonstrate here that SUMOylation of lysine K293 (mouse K310) located within an evolutionary conserved sequence in the human GR N-terminal domain allows the formation of a GR-small ubiquitin-related modifiers (SUMOs)-NCoR1/SMRT-HDAC3 repressing complex mandatory for GC-induced IR nGRE-mediated direct repression in vitro, but does not affect transactivation. Importantly, these results were validated in vivo: in K310R mutant mice and in mice ablated selectively for nuclear receptor corepressor 1 (NCoR1)/silencing mediator for retinoid or thyroid-hormone receptors (SMRT) corepressors in skin keratinocytes, Dex-induced direct repression and the formation of repressing complexes on IR nGREs were impaired, whereas transactivation was unaffected. In mice selectively ablated for histone deacetylase 3 (HDAC3) in skin keratinocytes, GC-induced direct repression, but not bindings of GR and of corepressors NCoR1/SMRT, was abolished, indicating that HDAC3 is instrumental in IR nGRE-mediated repression. Moreover, we demonstrate that the binding of HDAC3 to IR nGREs in vivo is mediated through interaction with SMRT/NCoR1. We also show that the GR ligand binding domain (LBD) is not required for SMRT

  8. Igneous and Sedimentary Compositions from Four Landing Sites on Mars from the Alpha Particle X-Ray Spectrometer (APXS)

    NASA Technical Reports Server (NTRS)

    Gellert, R.; Arvidson, R. E.; Clark, B. C.; Ming, D. W.; Mittlefehldt, D. W.; Morris, R. W.; Squyres, S. W.; VanBommel, S.; Yen, A. S.

    2016-01-01

    The APXS - supported and promoted strongly by Heinrich Waenke - on all four Mars Rovers has returned compositional data from about 1000 rocks and soil targets along the combined traverses of over 60 kilometers. Providing precise and accurate bulk chemistry with typically 16 quantified elements, the APXS is a powerful and versatile tool that when combined with the ability to traverse to key rocks and soils has provided critical information needed to understand the geologic evolution of Mars. APXS data allow comparisons among landing sites, provide ground truth for orbiters and connections back to SNC meteorites. The soils and dust are basaltic in character and represent the average Mars composition similar to Adirondack basalts from Gusev crater but with unambiguous elevated and correlated S, Cl and Zn contents. At all four landing sites the APXS found several rocks with a felsic composition. The similarity is best assessed in a logarithmic ratio plot of rock normalized to the average soil composition (Fig.1). High alkaline, Al, and low Mg, Fe, low S, Cl and Ni, Zn as well as an Fe/Mn ratio of approximately 50 indicate a likely unaltered and igneous origin. Sediments, e.g. the Burns formation, with approximately 25 wt% SO3 at Meridiani Planum have been documented over 10s of kilometers (Fig. 2). This formation is compositionally homogeneous, but showing the removal of MgSO4 and a threefold increase in Cl downhill in 2 craters. The degraded rim of the Noachian crater Endeavour resembles average Mars crust, with local Ca, Mg and Fe sulfate alteration and elevated Mn, some felsic rocks, and high Al, Si and low Fe rocks, possibly indicating clays. Unusual soils at Gusev crater in the area surrounding Home Plate include some very rich in ferric sulfate salts (up to 35 wt% SO3) and some with 90% wt% SiO2, possibly indicating fumerolic activities. Rocks in the Columbia Hills show significant signs of alteration including elevated S, Cl and Br in the abraded interior. At

  9. Chemical, multispectral, and textural constraints on the composition and origin of rocks at the Mars Pathfinder landing site

    USGS Publications Warehouse

    McSween, H.Y.; Murchie, S.L.; Crisp, J.A.; Bridges, N.T.; Anderson, R.C.; Bell, J.F.; Britt, D.T.; Brückner, J.; Dreibus, G.; Economou, T.; Ghosh, A.; Golombek, M.P.; Greenwood, J.P.; Johnson, J. R.; Moore, H.J.; Morris, R.V.; Parker, T.J.; Rieder, R.; Singer, R.; Wänke, H.

    1999-01-01

    Rocks at the Mars Pathfinder site are probably locally derived. Textures on rock surfaces may indicate volcanic, sedimentary, or impact-generated rocks, but aeolian abration and dust coatings prevent unambiguous interpretation. Multispectral imaging has resolved four spectral classes of rocks: gray and red, which occur on different surfaces of the same rocks; pink, which is probably soil crusts; and maroon, which occurs as large boulders, mostly in the far field. Rocks are assigned to two spectral trends based on the position of peak reflectance: the primary spectral trend contains gray, red, and pink rocks; maroon rocks constitute the secondary spectral trend. The spatial pattern of spectral variations observed is oriented along the prevailing wind direction. The primary spectral trend arises from thin ferric coatings of aeolian dust on darker rocks. The secondary spectral trend is apparently due to coating by a different mineral, probably maghemite or ferrihydrite. A chronology based on rock spectra suggests that rounded maroon boulders constitute the oldest petrologic unit (a flood deposit), succeeded by smaller cobbles possibly deposited by impact, and followed by aeolian erosion and deposition. Nearly linear chemical trends in alpha proton X-ray spectrometer rock compositions are interpreted as mixing lines between rock and adhering dust, a conclusion supported by a correlation between sulfur abundance and red/blue spectral ratio. Extrapolations of regression lines to zero sulfur give the composition of a presumed igneous rock. The chemistry and normative mineralogy of the sulfur-free rock resemble common terrestrial volcanic rocks, and its classification corresponds to andesite. Igneous rocks of this composition may occur with clastic sedimentary rocks or impact melts and breccias. However, the spectral mottling expected on conglomerates or breccias is not observed in any APXS-analyzed rocks. Interpretation of the rocks as andesites is complicated by absence

  10. Ferromanganese nodules from MANOP Sites H, S, and R-Control of mineralogical and chemical composition by multiple accretionary processes

    USGS Publications Warehouse

    Dymond, J.; Lyle, M.; Finney, B.; Piper, D.Z.; Murphy, K.; Conard, R.; Pisias, N.

    1984-01-01

    The chemical composition of ferromanganese nodules from the three nodule-bearing MANOP sites in the Pacific can be accounted for in a qualitative way by variable contributions of distinct accretionary processes. These accretionary modes are: 1. (1) hydrogenous, i.e., direct precipitation or accumulation of colloidal metal oxides in seawater, 2. (2) oxic diagenesis which refers to a variety of ferromanganese accretion processes occurring in oxic sediments; and 3. (3) suboxic diagenesis which results from reduction of Mn+4 by oxidation of organic matter in the sediments. Geochemical evidence suggests processes (1) and (2) occur at all three MANOP nodule-bearing sites, and process (3) occurs only at the hemipelagic site, H, which underlies the relatively productive waters of the eastern tropical Pacific. A normative model quantitatively accounts for the variability observed in nearly all elements. Zn and Na, however, are not well explained by the three end-member model, and we suggest that an additional accretionary process results in greater variability in the abundances of these elements. Variable contributions from the three accretionary processes result in distinct top-bottom compositional differences at the three sites. Nodule tops from H are enriched in Ni, Cu, and Zn, instead of the more typical enrichments of these elements in nodule bottoms. In addition, elemental correlations typical of most pelagic nodules are reversed at site H. The three accretionary processes result in distinct mineralogies. Hydrogenous precipitation produces ??MnO2. Oxic diagenesis, however, produces Cu-Ni-rich todorokite, and suboxic diagenesis results in an unstable todorokite which transforms to a 7 A?? phase ("birnessite") upon dehydration. The presence of Cu and Ni as charge-balancing cations influence the stability of the todorokite structure. In the bottoms of H nodules, which accrete dominantly by suboxic diagenesis, Na+ and possibly Mn+2 provide much of the charge balance for

  11. Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site

    SciTech Connect

    Lin, Xueju; Kennedy, David W.; Fredrickson, Jim K.; Bjornstad, Bruce N.; Konopka, Allan

    2011-11-29

    Microbial diversity in subsurface sediments at the Hanford Site 300 Area near Richland, Washington State (USA) was investigated by analyzing samples recovered from depths of 9 to 52 m. Approximately 8000 near full-length 16S rRNA gene sequences were analyzed across geological strata that include a natural redox transition zone. These strata included the oxic coarse-grained Hanford formation, fine-grained oxic and anoxic Ringold Formation sediments, and the weathered basalt group. We detected 1233 and 120 unique bacterial and archaeal OTUs (Operational Taxonomic Units at the 97% identity level), respectively. Microbial community structure and richness varied substantially across the different geological strata. Bacterial OTU richness (Chao1 estimator) was highest (>700) in the upper Hanford formation, and declined to about 120 at the bottom of the Hanford formation. Just above the Ringold oxic-anoxic interface, richness was about 325 and declined to less than 50 in the deeper reduced zones. The deeper Ringold strata were characterized by a preponderance (ca. 90%) of Proteobacteria. The Bacterial community in the oxic sediments contained not only members of 9 well-recognized phyla but also an unusually high proportion of 3 candidate divisions (GAL15, NC10, and SPAM). Additionally, novel phylogenetic orders were identified within the Delta-proteobacteria, a clade rich in microbes that carry out redox transformations of metals that are important contaminants on the Hanford Site.

  12. Compositional and physicochemical changes in waste materials and biogas production across 7 landfill sites in UK.

    PubMed

    Frank, R R; Cipullo, S; Garcia, J; Davies, S; Wagland, S T; Villa, R; Trois, C; Coulon, F

    2016-08-28

    The aim of this study was to evaluate the spatial distribution of the paper and fines across seven landfill sites (LFS) and assess the relationship between waste physicochemical properties and biogas production. Physicochemical analysis of the waste samples demonstrated that there were no clear trends in the spatial distribution of total solids (TS), moisture content (MC) and waste organic strength (VS) across all LFS. There was however noticeable difference between samples from the same landfill site. The effect of landfill age on waste physicochemical properties showed no clear relationship, thus, providing evidence that waste remains dormant and non-degraded for long periods of time. Landfill age was however directly correlated with the biochemical methane potential (BMP) of waste; with the highest BMP obtained from the most recent LFS. BMP was also correlated with depth as the average methane production decreased linearly with increasing depth. There was also a high degree of correlation between the Enzymatic Hydrolysis Test (EHT) and BMP test results, which motivates its potential use as an alternative to the BMP test method. Further to this, there were also positive correlations between MC and VS, VS and biogas volume and biogas volume and CH4 content. Outcomes of this work can be used to inform waste degradation and methane enhancement strategies for improving recovery of methane from landfills.

  13. Contents and compositions of glycosaminoglycans in different sites of the human hip joint cartilage.

    PubMed Central

    Yoshida, K; Azuma, H

    1982-01-01

    The distribution of glycosaminoglycans (GAGs) in different functional regions (weight-bearing and nonweight-bearing portions) of the human hip joint cartilage was studied. The results obtained were as follows: (1) Weight-bearing cartilage contains larger amounts of GAGs than nonweight-bearing, cartilage. (2) Weight-bearing cartilage contains keratan sulphate in higher ratio to chondroitin sulphate than nonweight-bearing cartilage. (3) The differences in content and composition of GAGs between the weight-bearing and nonweight-bearing portions are more pronounced in the femoral head than in the acetabulum. The preliminary analyses showed that the chondroitin sulphate from the acetabular cartilage contained exclusively 6-sulphated disaccharide units and there was some heterogeneity in keratan sulphate. PMID:6812509

  14. Gap-flow Mediated Transport of Pollution to a Remote Coastal Site: Effects upon Aerosol Composition

    NASA Astrophysics Data System (ADS)

    Cornwell, G.; Martin, A.; Petters, M.; Prather, K. A.; Taylor, H.; Rothfuss, N.; DeMott, P. J.; Kreidenweis, S. M.

    2015-12-01

    During the CalWater 2015 field campaign, observations of aerosol size, concentration, chemical composition, and cloud activity were made at Bodega Bay, CA on the remote California coast. Strong anthropogenic influence on air quality, aerosol physicochemical properties and cloud activity was observed at Bodega Bay during periods of special meteorological conditions, known as Petaluma Gap Flow, in which air from California's interior is transported to the coast. This study utilizes single particle mass spectrometry, along with aerosol physical and chemical measurements and meteorological measurements to show that the dramatic change in aerosol properties is strongly related to regional meteorology and anthropogenically-influenced chemical processes in California's Central Valley. The change in airmass properties from those typical of a remote marine environment to properties of a continental regime has impacts on atmospheric radiative balance and cloud formation that must be accounted for in regional climate simulation.

  15. Composite active site of chondroitin lyase ABC accepting both epimers of uronic acid

    SciTech Connect

    Shaya, D.; Hahn, Bum-Soo; Bjerkan, Tonje Marita; Kim, Wan Seok; Park, Nam Young; Sim, Joon-Soo; Kim, Yeong-Shik; Cygler, M.

    2008-03-19

    Enzymes have evolved as catalysts with high degrees of stereospecificity. When both enantiomers are biologically important, enzymes with two different folds usually catalyze reactions with the individual enantiomers. In rare cases a single enzyme can process both enantiomers efficiently, but no molecular basis for such catalysis has been established. The family of bacterial chondroitin lyases ABC comprises such enzymes. They can degrade both chondroitin sulfate (CS) and dermatan sulfate (DS) glycosaminoglycans at the nonreducing end of either glucuronic acid (CS) or its epimer iduronic acid (DS) by a {beta}-elimination mechanism, which commences with the removal of the C-5 proton from the uronic acid. Two other structural folds evolved to perform these reactions in an epimer-specific fashion: ({alpha}/{alpha}){sub 5} for CS (chondroitin lyases AC) and {beta}-helix for DS (chondroitin lyases B); their catalytic mechanisms have been established at the molecular level. The structure of chondroitinase ABC from Proteus vulgaris showed surprising similarity to chondroitinase AC, including the presence of a Tyr-His-Glu-Arg catalytic tetrad, which provided a possible mechanism for CS degradation but not for DS degradation. We determined the structure of a distantly related Bacteroides thetaiotaomicron chondroitinase ABC to identify additional structurally conserved residues potentially involved in catalysis. We found a conserved cluster located {approx}12 {angstrom} from the catalytic tetrad. We demonstrate that a histidine in this cluster is essential for catalysis of DS but not CS. The enzyme utilizes a single substrate-binding site while having two partially overlapping active sites catalyzing the respective reactions. The spatial separation of the two sets of residues suggests a substrate-induced conformational change that brings all catalytically essential residues close together.

  16. Isotopic Composition of Gaseous Elemental Mercury (Hg0) at Various Sites in Japan

    NASA Astrophysics Data System (ADS)

    Yamakawa, A.; Moriya, K.; Yoshinaga, J.

    2015-12-01

    Mercury (Hg) is a toxic heavy metal, which exists in various chemical forms in the environmental system. In the atmosphere, Hg exists in three forms (Hg0(g), Hg+2(g), and Hg(p)). Hg0(g) is the dominant species of atmospheric Hg, accounting for >95% of the total Hg in the atmosphere. Because Hg0(g) is highly volatile and has limited solubility in water, it cannot be easily removed by wet or dry deposition processes. Therefore, the residence time of Hg0(g) in the atmosphere is relatively long (1 to 2 years), allowing long-range transport from mercury emission source(s). Conversely, Hg+2(g) and Hg(p) are effectively removed from the atmosphere through wet and dry depositions. The determination of mercury source attribution using quantitative data is challenging because Hg0(g) may be deposited on an area upon oxidation to Hg+2(g) and associated with aerosols and particulates to form Hg(p) while the global cycling of Hg0(g). Over the last decade, the development of analytical methods of highly precise Hg isotopic measurements demonstrated mass-dependent fractionation (MDF) and mass-independent fractionation (MIF) of Hg isotopes in environmental samples. For instance, MDF of Hg isotopes is thought to occur during various natural and industrial Hg transformations. MIF of Hg isotopes is observed during abiotic reduction, photochemical and non-photochemical, and physical and chemical processes. Such processes lead to differences in the Hg isotopic composition of different emission sources, both natural and anthropogenic, and atmospheric processes (i.e., transportation, oxidation/reduction, deposition, and reemission). Therefore, Hg isotopic compositions could be used to trace the sources and processes of atmospheric Hg. For securing the reliability and accuracy of atmospheric Hg isotope data, the methods of collection, pretreatment, and isotopic measurement for Hg0(g) were developed to obtain high recovery yield of samples with no Hg isotopic fractionation during each

  17. Atmospheric precipitation and chemical composition of an urban site, Guaíba hydrographic basin, Brazil

    NASA Astrophysics Data System (ADS)

    Migliavacca, D.; Teixeira, E. C.; Wiegand, F.; Machado, A. C. M.; Sanchez, J.

    The purpose of the present work was to study the chemical composition of bulk and wet atmospheric precipitation in the Guaíba Hydrographic Basin, in South Brazil. The samples were analyzed from January to December 2002 at three different stations, i.e., 8° Distrito and CEASA stations in the city of Porto Alegre, and Charqueadas station, located in the city of same name. The bulk and wet precipitation were analyzed for conductivity, pH, Cl -, NO 3-, F -, SO 42-, Na +, K +, Mg 2+, NH 4+, Ca 2+, Cu, Zn, Mn, Fe and Al. The pH values in the samples of atmospheric precipitation ranged between 4.75 and 7.45. The analysis of linear regression applied to the set of studied variables showed that neutralization occurred in samples of bulk and wet precipitation. It was found that the Cl present in samples of atmospheric precipitation originated from sea salts and anthropogenic sources. The principal components analysis (PCA) identified the main anthropogenic sources within the Guaíba Hydrographic Basin (GHB). Cluster analysis grouped the events identified for each station in the PCA in association with the meteorological data.

  18. Gas production, composition and emission at a modern disposal site receiving waste with a low-organic content.

    PubMed

    Scheutz, Charlotte; Fredenslund, Anders M; Nedenskov, Jonas; Samuelsson, Jerker; Kjeldsen, Peter

    2011-05-01

    AV Miljø is a modern waste disposal site receiving non-combustible waste with a low-organic content. The objective of the current project was to determine the gas generation, composition, emission, and oxidation in top covers on selected waste cells as well as the total methane (CH(4)) emission from the disposal site. The investigations focused particularly on three waste disposal cells containing shredder waste (cell 1.5.1), mixed industrial waste (cell 2.2.2), and mixed combustible waste (cell 1.3). Laboratory waste incubation experiments as well as gas modeling showed that significant gas generation was occurring in all three cells. Field analysis showed that the gas generated in the cell with mixed combustible waste consisted of mainly CH(4) (70%) and carbon dioxide (CO(2)) (29%) whereas the gas generated within the shredder waste, primarily consisted of CH(4) (27%) and nitrogen (N(2)) (71%), containing no CO(2). The results indicated that the gas composition in the shredder waste was governed by chemical reactions as well as microbial reactions. CH(4) mass balances from three individual waste cells showed that a significant part (between 15% and 67%) of the CH(4) generated in cell 1.3 and 2.2.2 was emitted through leachate collection wells, as a result of the relatively impermeable covers in place at these two cells preventing vertical migration of the gas. At cell 1.5.1, which is un-covered, the CH(4) emission through the leachate system was low due to the high gas permeability of the shredder waste. Instead the gas was emitted through the waste resulting in some hotspot observations on the shredder surface with higher emission rates. The remaining gas that was not emitted through surfaces or the leachate collection system could potentially be oxidized as the measured oxidation capacity exceeded the potential emission rate. The whole CH(4) emission from the disposal site was found to be 820 ± 202 kg CH(4)d(-1). The total emission rate through the leachate

  19. Transient effects on groundwater chemical compositions from pumping of supply wells at the Nevada National Security Site, 1951-2008

    USGS Publications Warehouse

    Paces, James B.; Elliott, Peggy E.; Fenelon, Joseph M.; Laczniak, Randell J.; Moreo, Michael T.

    2012-01-01

    Nuclear testing and support activities at the Nevada National Security Site have required large amounts of water for construction, public consumption, drilling, fire protection, hydraulic and nuclear testing, and dust control. To supply this demand, approximately 20,000 million gallons of water have been pumped from 23 wells completed in 19 boreholes located across the Nevada National Security Site starting as early as the 1950s. As a consequence of more or less continuous pumping from many of these wells for periods as long as 58 years, transient groundwater flow conditions have been created in the aquifers that supplied the water. To evaluate whether long-term pumping caused changes in water compositions over time, available chemical analyses of water samples from these 19 boreholes were compiled, screened, and evaluated for variability including statistically significant temporal trends that can be compared to records of groundwater pumping. Data used in this report have been extracted from a large database (Geochem08, revision 3.0, released in September 2008) containing geochemical and isotopic information created and maintained by primary contractors to the U.S. Department of Energy, National Nuclear Security Administration, Nevada Site Office. Data extracted from this source were compiled for the entire period of record, converted to uniform reporting units, and screened to eliminate analyses of poor or unknown quality, as well as clearly spurious values. The resulting data are included in accompanying spreadsheets that give values for (1) pH and specific conductance, (2) major ion concentrations, (3) trace element concentrations and environmental isotope ratios, and (4) mean, median, and variance estimates for major ion concentrations. The resulting data vary widely in quality and time-series density. An effort has been made to establish reasonable ranges of analytical uncertainty expected for each analyte and eliminate analyses that are obvious outliers

  20. Composition and stability of the condensate observed at the Viking Lander 2 site on Mars

    NASA Technical Reports Server (NTRS)

    Hart, H. M.; Jakosky, B. M.

    1986-01-01

    Surface energy balance and near-surface temperature data from the Viking Lander 2 site taken during the first winter that condensated were observed and analyzed to determine the relative stability of CO2 and H2O frosts. The CO2 frost stability is calculated with an equilibrium surface energy balance model, i.e., the total energy incident on a frost surface is compared with the blackbody energy emitted by the surface. The energy sources considered were IR emission from the atmosphere, sunlight, and the sensible heat flux from the atmosphere. H2O stability was examined as a function of buoyant diffusion and turbulent mixing processes which could remove saturated near-surface gases. The CO2 frost is found to be sufficiently unstable at the time the condensate was observed on the ground, so all CO2 ice deposited at night would boil away in a few hours of sunlight. CO2 ice would not form during a dust storm. Water frost would be stable during the condensate observations, since sublimation would occur at a rate below 1 micron/day. A stable winter thickness of 10 microns is projected for the water ice.

  1. Chemical compositions of wet precipitation and anthropogenic influences at a developing urban site in southeastern China

    NASA Astrophysics Data System (ADS)

    Zhang, Miaoyun; Wang, Shijie; Wu, Fengchang; Yuan, Xianghong; Zhang, Ying

    2007-06-01

    A comprehensive study on the chemical compositions of wet precipitation was carried out from January 2004 to December 2004 in Jinhua, southeastern China's Zhejiang Province. All samples were analyzed for pH, electrical conductivity and major ions (F -, Cl -, NO 3-, SO 42-, K +, Na +, Ca 2+, Mg 2+ and NH 4+). The rainwater was typically acidic with a volume-weighted mean pH of 4.54, which ranged from 3.64 to 6.76. SO 42- and NO 3- were the main anions, while NH 4+ and Ca 2+ were the main cations. The concentrations of these major ions were generally higher compared to those reported in other parts of the world, but much lower than those in northern China. Wet deposition fluxes of major ions showed pronounced seasonal variations with maximum in spring and minimum in autumn. Significant correlations were found in soil-derived species among Ca 2+, Mg 2+ and K + and sea-salt species between Na + and Cl -. Other relatively good correlations were also observed between Ca 2+ and SO 42-, Mg 2+ and SO 42-, Mg 2+ and NO 3-, Mg 2+ and Cl -. Principal component analysis was also performed on individual precipitation to find possible sources of the major ionic species. Varimax rotated four components accounting for 85.9% of the total variance, and were interpreted as acid and alkaline pollutants, sea spray and mixed source, soil and acid/neutralization. Calculation of enrichment factors for rainwater components relative to soil and seawater indicated that Ca 2+ and K + mainly originated from the terrestrial source, and SO 42- and NO 3- were mostly attributed for the anthropogenic activities in the study area. In general, the results suggested that precipitation chemistry is strongly influenced by anthropogenic sources rather than natural and marine sources. The pollutants in rainwater were mainly derived from long distance transport, local industry and traffic sources.

  2. Benson Beach Demonstration Project: Composition and Abundance of Biota at Three Alternative Sump Sites

    SciTech Connect

    Williams, Greg D.; Pearson, Walter H.; Evans, Nathan R.; Anderson, Michael G.

    2004-01-15

    The Portland District of the U.S. Army Corps of Engineers is investigating plans to provide sediment to nourish beaches north of the Mouth of the Columbia River (MCR). Under the currently designed proposal, sediment dredged from the MCR will be temporarily stored at one of three proposed areas south of the North Jetty before being redredged and moved by a cutterhead pipeline dredge over the jetty to nourish Benson Beach. Resulting potential impacts to resident Dungeness crab (Cancer magister) and fishes represent one of the criteria for evaluating each of the alternative locations. To establish the species composition and relative abundance of crabs and fishes associated with each of the three proposed sump areas, researchers from the Pacific Northwest National Laboratory Marine Sciences Division completed nine field sampling trips from July 8, 2003, to November 1, 2003, for a total of 113 successful trawls comprising an area of over 7.4 ha (74,156 m2). This report documents the results of that effort. To understand the relative risk of losses to crab populations associated with dredging impacts at the sump alternative areas, it is recommended that a modified dredge impact model be developed using the data collected in this study. This model should estimate crab adult equivalent loss and associated error rates to gain a population-level perspective on the potential entrainment impacts at each of the three alternative sump areas. As well, a sustained survey of Dungeness crab distribution and movement within the Columbia River estuary would clarify the relative value of the sump areas as a migratory corridor for crab populations, and support management decisions relative to issues associated with dredged material handling and disposal.

  3. Variations in the bacterial community compositions at different sites in the tomb of Emperor Yang of the Sui Dynasty.

    PubMed

    Huang, Zhi; Zhao, Fei; Li, Yonghui; Zhang, Jianwei; Feng, Youzhi

    2017-03-01

    To fully understand the bacterial processes in tomb environments, it is necessary to investigate the details of the bacterial communities present under such oligotrophic conditions. Here, high-throughput sequencing based on partial 16S rRNA gene sequences was used to fully evaluate the bacterial communities at different sites in the tomb of Emperor Yang of the Sui Dynasty. We also aimed to identify the soil factors that were significant related to bacterial diversity and community composition. The results showed the presence of a broad taxonomic diversity that included nine major phyla. Actinobacteria, Firmicutes and Proteobacteria dominated the bacterial profiles in all tomb soil samples. However, significant differences between deposited soils (DS) and covering soils (CSA, CSB and CSC) were revealed by chemistry-based principal component analysis (PCA), the number of OTUs, and the Chao 1 and Shannon indexes. At the family level, hierarchically clustered heatmap and LefSe analyses showed differences in the bacterial community compositions at different sampling sites. Notably, CSA contained significant populations of Nocardioidaceae, Pseudonocardiaceae and Streptomycetaceae, which are often reported to be associated with biodeterioration in cave environments. Further, the most abundant group (>10%) in all soil samples was Streptococcaceae, whose abundance decreased from 34.66% to 13.43% with increasing soil depth. The results of redundancy analysis (RDA) and the Monte Carlo permutation test indicated that soil pH and Cu and Mn levels were significantly related to the bacterial communities in this tomb. This research offers new insight into bacterial communities in cave environments and also provides important information for the protection of this historically important tomb.

  4. Analysis of High Frequency Site-Specific Nitrogen and Oxygen Isotopic Composition of Atmospheric Nitrous Oxide at Mace Head, Ireland

    NASA Astrophysics Data System (ADS)

    McClellan, M. J.; Harris, E. J.; Olszewski, W.; Ono, S.; Prinn, R. G.

    2014-12-01

    Atmospheric nitrous oxide (N2O) significantly impacts Earth's climate due to its dual role as an inert potent greenhouse gas in the troposphere and as a reactive source of ozone-destroying nitrogen oxides in the stratosphere. However, there remain significant uncertainties in the global budget of this gas. The marked spatial divide in its reactivity means that all stages in the N2O life cycle—emission, transport, and destruction—must be examined to understand the overall effect of N2O on climate. Source and sink processes of N2O lead to varying concentrations of N2O isotopologues (14N14N16O, 14N15N16O, 15N14N16O, and 14N14N18O being measured) due to preferential isotopic production and elimination in different environments. Estimation of source and sink fluxes can be improved by combining isotopically resolved N2O observations with simulations using a chemical transport model with reanalysis meteorology and treatments of isotopic signatures of specific surface sources and stratospheric intrusions. We present the first few months of site-specific nitrogen and oxygen isotopic composition data from the Stheno-TILDAS instrument (Harris et al, 2013) at Mace Head, Ireland and compare these to results from MOZART-4 (Model for Ozone and Related Chemical Tracers, version 4) chemical transport model runs including N2O isotopic fractionation processes and reanalysis meterological fields (NCEP/NCAR, MERRA, and GEOS-5). This study forms the basis for future inverse modeling experiments that will improve the accuracy of isotopically differentiated N2O emission and loss estimates. Ref: Harris, E., D. Nelson, W. Olszewski, M. Zahniser, K. Potter, B. McManus, A. Whitehill, R. Prinn, and S. Ono, Development of a spectroscopic technique for continuous online monitoring of oxygen and site-specific nitrogen isotopic composition of atmospheric nitrous oxide, Analytical Chemistry, 2013; DOI: 10.1021/ac403606u.

  5. Studying the effect of the Semipalatinsk Test Site on radionuclide and elemental composition of water objects in the Irtysh River.

    PubMed

    Solodukhin, V; Аidarkhanov, A; Lukashenko, S; Gluchshenko, V; Poznyak, V; Lyahova, O

    2015-06-01

    The results of the field and laboratory studies of radiation and environmental state at the specific area of Irtysh River adjacent to the Semipalatinsk Test Site are provided. It was found that the radiation situation in this area is normal: equivalent dose of γ-radiation = (0.11-0.13) µSv h(-1). Determination of radionuclide composition of soil, bottom sediment and water samples was performed by the methods of instrumental γ-spectrometry, radiochemical analysis and the liquid scintillation β-spectrometry. It was found that concentrations of the studied natural and artificial radionuclides in these objects are very low; no contamination with radionuclides was detected in this segment of Irtysh River. The article provides the results of elemental composition determination for samples of soil and bottom sediment (by X-ray fluorescence method) and water samples (by inductively coupled plasma mass spectrometry method). It is shown that the content of some elements (Li, Be, B, V, Cu, Sr, Mo) in the water of Irtysh River increases downstream. The additional studies are required to explain this peculiarity.

  6. Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site

    SciTech Connect

    Lin, Xueju; Kennedy, David W.; Fredrickson, Jim K.; Bjornstad, Bruce N.; Konopka, Allan

    2012-02-01

    The microbial diversity in subsurface sediments at the Hanford Site's 300 Area in southeastern Washington State was investigated by analyzing 21 samples recovered from depths that ranged from 9 to 52 m. Approximately 8000 non-chimeric Bacterial and Archaeal 16S rRNA gene sequences were analyzed across geological strata that contain a natural redox transition zone. These strata included the oxic coarse-grained Hanford formation, fine-grained oxic and anoxic Ringold Formation sediments, and the weathered basalt group. We detected 1233 and 120 unique bacterial and archaeal OTUs (Operational Taxonomic Units, defined at the 97% identity level). Microbial community structure and richness varied substantially across the different geological strata. Bacterial OTU richness (based upon Chao1 estimator) was highest (>700) in the upper Hanford formation, and declined to about 120 at the bottom of the Hanford formation. Just above the Ringold oxic-anoxic transition zone, richness was about 325 and declined to less than 50 in the deeper reduced zones. The Bacterial community in the oxic Hanford and Ringold Formations contained members of 9 major well-recognized phyla as well 30 as unusually high proportions of 3 candidate divisions (GAL15, NC10, and SPAM). The deeper Ringold strata were characterized by low OTU richness and a very high preponderance (ca. 90%) of Proteobacteria. The study has greatly expanded the intralineage phylogenetic diversity within some major divisions. These subsurface sediments have been shown to contain a large number of phylogenetically novel microbes, with substantial heterogeneities between sediment samples from the same geological formation.

  7. Composite organization of the cobalamin binding and cubilin recognition sites of intrinsic factor.

    PubMed

    Fedosov, Sergey N; Fedosova, Natalya U; Berglund, Lars; Moestrup, Søren K; Nexø, Ebba; Petersen, Torben E

    2005-03-08

    Intrinsic factor (IF(50)) is a cobalamin (Cbl)-transporting protein of 50 kDa, which can be cleaved into two fragments: the 30 kDa N-terminal peptide IF(30) and the 20 kDa C-terminal glycopeptide IF(20). Experiments on binding of Cbl to IF(30), IF(20), and IF(50) revealed comparable association rate constants (k(+)(Cbl) = 4 x 10(6), 14 x 10(6), and 26 x 10(6) M(-1) s(-1), respectively), but the equilibrium dissociation constants were essentially different (K(Cbl) = 200 microM, 0.2 microM, and site on IF is caused by assembly of two distant domains, which allows the saturated protein to be recognized by the receptor. The obtained parameters for ligand and receptor binding indicate that both full-length IF(50) and the fragments may be involved in Cbl assimilation.

  8. COMPOSITE ANALYSIS OF LLW DISPOSAL FACILITIES AT THE U.S. DEPARTMENT OF ENERGY'S SAVANNAH RIVER SITE

    SciTech Connect

    Hiergesell, R; Mark Phifer, M; Frank02 Smith, F

    2009-01-08

    Composite Analyses (CA's) are required per DOE Order 435.1 [1], in order to provide a reasonable expectation that DOE low-level waste (LLW) disposal, high-level waste tank closure, and transuranic (TRU) waste disposal in combination with Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA), Resource Conservation and Recovery Act (RCRA), and deactivation and decommissioning (D&D) actions, will not result in the need for future remedial actions in order to ensure radiological protection of the public and environment. This Order requires that an accounting of all sources of DOE man-made radionuclides and DOE enhanced natural radionuclides that are projected to remain on the site after all DOE site operations have ceased. This CA updates the previous CA that was developed in 1997. As part of this CA, an inventory of expected radionuclide residuals was conducted, exposure pathways were screened and a model was developed such that a dose to the MOP at the selected points of exposure might be evaluated.

  9. The fat-fascia paddle only with a composite fibula flap: marked reduction in donor site morbidity.

    PubMed

    Mohindra, A; Parmar, S; Praveen, P; Martin, T

    2016-08-01

    Fibula free flaps are used widely in head and neck reconstruction, primarily for their versatility and contribution to aesthetic and functional outcomes. The literature suggests that early complications such as wound dehiscence and skin graft loss can occur in up to a third of patients. The healing of these donor sites can be prolonged, and in certain cases may require an operative intervention. A method to overcome this problem is described herein. In raising the skin paddle, a standard lateral approach to the fibula harvest is used. The skin paddle is not isolated and the posterior margin of the paddle is maintained. The skin paddle epithelium is separated with a small cuff of adipose tissue from the underlying fat-fascia layer. This fat-fascia paddle is then raised with the fibula as normal and tacked to the margins of the recipient soft tissue defect. The fat-fascia paddle heals, resulting in a thin mucosal covering for prosthetic dental rehabilitation. This technique can reduce the incidence of donor site wound complications when raising a composite fibula flap.

  10. Organ- and season-dependent variation in the essential oil composition of Salvia officinalis L. cultivated at two different sites.

    PubMed

    Santos-Gomes, P C; Fernandes-Ferreira, M

    2001-06-01

    More than 50 compounds were identified in essential oils from stems and leaves of Salvia officinalis L. plants harvested in July, in Arouca, in northern Portugal. About 40 of those compounds were also present in flower essential oils, collected from the same plants. alpha-Thujone was the major compound, representing about 55, 30, and 18% of the essential oils from stems, leaves, and flowers, respectively. Significant percentage variations in the main compound classes of the essential oils from shoots sampled over the year were recorded at two different sites in northern Portugal. From December to April, oxygenated monoterpenes (MO) decreased from approximately 67-72% to values of 42-43% of the essential oils. During the same time interval, the percentage of monoterpene hydrocarbons (MH) rose from 8-11% to 17-22%. At both sites, sesquiterpene hydrocarbons (SH) rose from approximately 7% in February to 19-22% in April, decreasing thereafter to approximately 9% in July. Oxygenated sesquiterpenes (SO) increased from a minimum of approximately 5% in July to a maximum of 8-11% in February, decreasing thereafter. The compounds that mostly accounted for the essential oil composition variation were alpha-pinene, beta-pinene, and camphene, as MH; alpha-thujone and camphor, as MO; alpha-humulene and beta-caryophyllene, as SH; and viridiflorol, as SO.

  11. Lasers and landing sites: The geomorphology, stratigraphy, and composition of Mars

    NASA Astrophysics Data System (ADS)

    Anderson, Ryan

    2012-05-01

    With each new mission to Mars, the amount of available data increases dramatically. This drastic increase in data volume requires new approaches to take advantage of the available information. The goal of the work presented here is to maximize the science return from existing and future datasets. Chapter 2 uses multiple orbital datasets to characterize Gale Crater, with a focus on the northwestern crater floor and lower mound. This work played a role in the selection of Gale Crater as the landing site for Mars Science Laboratory (MSL). It was not possible to conclusively determine the origin of the lower mound, but we interpret features on the upper mound as aeolian cross-beds. Chapters 3 and 4 investigate methods for improving the accuracy of laser-induced breakdown spectroscopy (LIBS). In Chapter 3, the accuracy of partial least squares (PLS) and two types of neural network are compared, using several pre-processing methods including automated feature selection. We find that partial least squares without averaging typically gives the best results. Chapter 3 also investigates the influence of grain size on the accuracy of analyses, showing that >20 analysis spots may be required for heterogeneous targets. In Chapter 4, we test the hypothesis that clustering the dataset before analysis leads to improved accuracy. We observe modest improvements for five k-means clusters and with iterative application of clustering and PLS. In Chapter 5, we use several methods to relate Mars Exploration Rover (MER) Panoramic camera multispectral observations to alpha particle X-ray spectrometer and Mossbauer spectrometer results. The correlation between the Gusev datasets is often poor although there is some improvement when only data from drilled spots is considered. The performance is better for the Meridiani data, but Meridiani PLS models are not generalizable to Gusev data. MSL ChemCam analyses and MastCam spectra may show higher correlations because the instruments have a

  12. Chemical composition and mass size distribution of PM1.0 at an elevated site in central east China

    NASA Astrophysics Data System (ADS)

    Zhang, Y. M.; Zhang, X. Y.; Sun, J. Y.; Hu, G. Y.; Shen, X. J.; Wang, Y. Q.; Wang, T. T.; Wang, D. Z.; Zhao, Y.

    2014-06-01

    Size-resolved aerosol chemical compositions were measured continuously for one and half years with an aerosol mass spectrometer (AMS) to characterize the mass and size distributions (MSDs) of each component in bulk, fresh and aged submicron particles (approximately PM1.0) at Mountain Tai, an elevated site in Central East China (CEC) from June 2010 to January 2012. The majority of the regionally-dispersed aerosols were found to be contributed from short distance mixed aerosol, mostly from its south with organics and sulfate as the major components. The annual mean mass concentrations of organics, sulfate, nitrate, ammonium and chloride were 11.2, 9.2, 7.2, 5.8 and 0.95 μg m-3, respectively, which are much lower for organics and sulfate, and slightly lower for nitrate, ammonium and chloride than those at the nearby surface rural sites. High organics were observed for all four seasons, and the relatively fresh organic aerosol (OA) containing high proportion of less-photo chemically OA, were found from long-range transported aerosol from northwest. Semi-volatile and low-volatile oxidized OAs together contributed approximately 49%, 55% in spring and 72% and 51% in winter of total OA, showing at least 50% of OA can be attributable to SOA. Seasonally, the chemical components at the elevated site showed a "winter high and autumn low" pattern, with organics, sulfate and ammonium peaking in summer. Though no obvious differences of MSDs were seen for various chemical components in the planetary boundary layer (PBL) and free troposphere (FT), the concentrations were a factor of 5-7 higher in PBL than in FT. The averaged MSDs of particles between 30-1000 nm for organics, sulfate, nitrate, and ammonium are approximately log-normal with similar mass median diameters (MMDs) of 539, 585, 542, and 545 nm, respectively, which were slightly larger than those in ground sites within North China Plain (NCP). Obvious differences in MMDs were found between fresh and aged aerosols for

  13. Characterisation of the organic composition of size segregated atmospheric particulate matter at traffic exposed and background sites in Madrid

    NASA Astrophysics Data System (ADS)

    Mirante, F.; Perez, R.; Alves, C.; Revuelta, M.; Pio, C.; Artiñano, B.; Nunes, T.

    2010-05-01

    The growing awareness of the impact of atmospheric particulate matter (PM) on climate, and the incompletely recognised but serious effects of anthropogenic aerosols on air quality and human health, have led to diverse studies involving almost exclusively the coarse or the fine PM fractions. However, these environmental effects, the PM formation processes and the source assignment depend greatly on the particle size distribution. The innovative character of this study consists in obtaining time series with a size-segregated detailed chemical composition of PM for differently polluted sites. In this perspective, a summer sampling campaign was carried out from 1 of June to 1 of July 2009. One of the sampling sites was located at a representative urban monitoring station (Escuelas Aguirre) belonging to the municipal network, located at a heavy traffic street intersection in downtown Madrid. Other sampling point was positioned within the CIEMAT area, located in the NW corner of the city, which can be considered an urban background or suburban site. Particulate matter was sampled with high volume cascade impactors at 4 size stages: 10-2.5, 2.5-0.95, 0.95-0.45 and < 0.45 µm. Daily sampling was carried out on quartz fibre filters. Based on meteorological conditions and PM mass concentrations, each one of the 7 groups of filters collected during the first week were combined with the corresponding filters of the third week. The same procedure was undertaken with samples of the second and fourth weeks. Filters of 0.95-0.45 and < 0.45 µm were pooled to obtain the PM0.95 organic composition. The PM size-segregated samples were subjected to organic analysis by gas chromatography-mass spectrometry (GC-MS), after solvent extraction of filters and an appropriate derivatisation technique. Besides the homologous compound series of organic classes (e.g. n-alkanes, n-alkanols and n-alkanoic acids), special attention was given to the determination of specific molecular markers for

  14. New Perspectives on the Validity of the "GRE"® General Test for Predicting Graduate School Grades. ETS GRE® Board Research Report. ETS GRE®-14-03. ETS Research Report. RR-14-26

    ERIC Educational Resources Information Center

    Klieger, David M.; Cline, Frederick A.; Holtzman, Steven L.; Minsky, Jennifer L.; Lorenz, Florian

    2014-01-01

    Given the serious consequences of making ill-fated admissions and funding decisions for applicants to graduate and professional school, it is important to rely on sound evidence to optimize such judgments. Previous meta-analytic research has demonstrated the generalizable validity of the "GRE"® General Test for predicting academic…

  15. The Validity of Scores from the "GRE"® revised General Test for Forecasting Performance in Business Schools: Phase One. ETS GRE® Board Research Report. ETS GRE®-14-01. ETS Research Report. RR-14-17

    ERIC Educational Resources Information Center

    Young, John W.; Klieger, David; Bochenek, Jennifer; Li, Chen; Cline, Fred

    2014-01-01

    Scores from the "GRE"® revised General Test provide important information regarding the verbal and quantitative reasoning abilities and analytical writing skills of applicants to graduate programs. The validity and utility of these scores depend upon the degree to which the scores predict success in graduate and business school in…

  16. An Examination of the Link between Rater Calibration Performance and Subsequent Scoring Accuracy in Graduate Record Examinations[R] (GRE[R]) Writing. Research Report. ETS RR-11-03

    ERIC Educational Resources Information Center

    Ricker-Pedley, Kathryn L.

    2011-01-01

    A pseudo-experimental study was conducted to examine the link between rater accuracy calibration performances and subsequent accuracy during operational scoring. The study asked 45 raters to score a 75-response calibration set and then a 100-response (operational) set of responses from a retired Graduate Record Examinations[R] (GRE[R]) writing…

  17. Dimensionality Analyses of the "GRE"® revised General Test Verbal and Quantitative Measures. ETS GRE® Board Research Report. ETS GRE®-16-02. ETS Research Report. RR-16-20

    ERIC Educational Resources Information Center

    Robin, Frédéric; Bejar, Isaac; Liang, Longjuan; Rijmen, Frank

    2016-01-01

    Exploratory and confirmatory factor analyses of domestic data from the" GRE"® revised General Test, introduced in 2011, were conducted separately for the verbal (VBL) and quantitative (QNT) reasoning measures to evaluate the unidimensionality and local independence assumptions required by item response theory (IRT). Results based on data…

  18. Calculator Use on the "GRE"® Revised General Test Quantitative Reasoning Measure. ETS GRE® Board Research Report. ETS GRE®-14-02. ETS Research Report. RR-14-25

    ERIC Educational Resources Information Center

    Attali, Yigal

    2014-01-01

    Previous research on calculator use in standardized assessments of quantitative ability focused on the effect of calculator availability on item difficulty and on whether test developers can predict these effects. With the introduction of an on-screen calculator on the Quantitative Reasoning measure of the "GRE"® revised General Test, it…

  19. Habitat Composition and Connectivity Predicts Bat Presence and Activity at Foraging Sites in a Large UK Conurbation

    PubMed Central

    Hale, James D.; Fairbrass, Alison J.; Matthews, Tom J.; Sadler, Jon P.

    2012-01-01

    Background Urbanization is characterized by high levels of sealed land-cover, and small, geometrically complex, fragmented land-use patches. The extent and density of urbanized land-use is increasing, with implications for habitat quality, connectivity and city ecology. Little is known about densification thresholds for urban ecosystem function, and the response of mammals, nocturnal and cryptic taxa are poorly studied in this respect. Bats (Chiroptera) are sensitive to changing urban form at a species, guild and community level, so are ideal model organisms for analyses of this nature. Methodology/Principal Findings We surveyed bats around urban ponds in the West Midlands conurbation, United Kingdom (UK). Sites were stratified between five urban land classes, representing a gradient of built land-cover at the 1 km2 scale. Models for bat presence and activity were developed using land-cover and land-use data from multiple radii around each pond. Structural connectivity of tree networks was used as an indicator of the functional connectivity between habitats. All species were sensitive to measures of urban density. Some were also sensitive to landscape composition and structural connectivity at different spatial scales. These results represent new findings for an urban area. The activity of Pipistrellus pipistrellus (Schreber 1774) exhibited a non-linear relationship with the area of built land-cover, being much reduced beyond the threshold of ∼60% built surface. The presence of tree networks appears to mitigate the negative effects of urbanization for this species. Conclusions/Significance Our results suggest that increasing urban density negatively impacts the study species. This has implications for infill development policy, built density targets and the compact city debate. Bats were also sensitive to the composition and structure of the urban form at a range of spatial scales, with implications for land-use planning and management. Protecting and

  20. Spatial and temporal patterns of nitrogen isotopic composition of ammonia at U.S. ammonia monitoring network sites

    NASA Astrophysics Data System (ADS)

    Felix, J. David; Elliott, Emily M.; Gay, David A.

    2017-02-01

    Ammonia (NH3) emissions and ammonium (NH4+) deposition can have harmful effects on the environment and human health but remain generally unregulated in the U.S. PM2.5 regulations require that an area not exceed an annual average PM2.5 value of 12 μg/m3 (averaged over three years), and since NH3 is a significant precursor to PM2.5 formation these are the closest indirect regulations of NH3 emissions in the U.S. If the U.S. elects to adopt NH3 emission regulations similar to those applied by the European Union, it will be imperative to first adequately quantify NH3 emission sources and transport, and also understand the factors causing varying emissions from each source. To further investigate NH3 emission sources and transport at a regional scale, NH3 was sampled monthly at a subset of nine Ammonia Monitoring Network (AMoN) sites and analyzed for nitrogen isotopic composition of NH3 (δ15N-NH3). The observed δ15N-NH3 values ranged from -42.4 to +7.1‰ with an average of -15.1 ± 9.7. The observed δ15N-NH3 values reported here provide insight into the spatial and temporal trends of the NH3 sources that contribute to ambient [NH3] in the U.S. In regions where agriculture is prevalent (i.e., U.S. Midwest), low and seasonally variable δ15N-NH3 values are observed and are associated with varying agricultural sources. In comparison, rural nonagricultural areas have higher and more seasonally consistent δ15N-NH3 values associated with a constant "natural" (e.g. soil, vegetation, bi-directional flux, ocean) NH3 source. With regards to temporal variation, the peak in U.S. spring agricultural activity (e.g. fertilizer application, livestock waste volatilization) is accompanied by a decrease in δ15N-NH3 values at a majority of the sites, whereas higher δ15N-NH3 values in other seasons could be due to shifting sources (e.g. coal-fired power plants) and/or fractionation scenarios. Fractionation processes that may mask NH3 source signatures are discussed and require

  1. Remarkable difference in catalytic performance of an organoamino-functionalized MCM-41-HPA composite with controlled site-isolation and site-aggregation

    NASA Astrophysics Data System (ADS)

    Chu, Xiaofeng; Le, Ying-Yi; Zhu, Quanjing; Fan, Kangnian; Dai, Wei-Lin

    2011-08-01

    The organoamino-functionalized mesoporous silicas with different distribution patterns—site-isolation or site-aggregation are prepared using post-grafting method. We have investigated the effects of the solvents and the catalytic reactivity of these catalysts. It is found that, using the polar ethanol as solvent, the catalytic center is site-isolated. Contrarily, the catalytic center is site-aggregated with the non-polar toluene. Characterization techniques, including transmission electron microscopy, nitrogen sorption experiments, thermogravimetric analysis, and ultraviolet-visible absorbance spectroscopy, demonstrate the most important dependencies of the distribution pattern on the polarity of solvent.

  2. Stable Carbon and Oxygen Isotope Composition of Soil and Shell from an Archeological Site in Kimble County, Texas

    NASA Astrophysics Data System (ADS)

    Salazar, K. K.; Paul, D.; Skrzypek, G.; Tomka, S. A.

    2007-12-01

    We report stable carbon (δ13C) and oxygen (δ18O) isotopic composition of inorganic carbonates, soil organic matter (SOM), and terrestrial gastropod shells present in a 130cm soil profile (radiocarbon date of 2340-2120 B.P) recovered from archeological site 41KM69, Kimble County, Texas. Prior to soil carbonate and SOM analyses, samples were treated with 5% sodium hypochlorite to remove organic matter and treated with 4% HCl to remove inorganic carbonate, respectively. Isotopic compositions of samples were obtained utilizing a Gasbench II (for carbonate-acid reaction technique) and a CHNS Elemental Analyzer (for SOM) coupled with a DeltaPlus XP Isotope Ratio Mass Spectrometer in continuous-flow. δ13C of carbonates in the soil profile varies in the range -2.15 to -4.63 ‰. δ18O of carbonates (ranging from -3.22 to -3.92‰) show little variation within the profile. δ13C of SOM (-25.61‰ to -22.83‰) suggests that C3 plants were predominant in the study area. There is ~3‰ enrichment in 13C of SOM at the bottom of profile relative to the top. Previous studies have shown that δ13C of modern soil carbonates are higher by 14-16‰ than SOM, whereas our results show about 20‰ difference. δ13C of land snail shells ( Rabdotus, Polygyra, Helicina) recovered from the soil show strong linear correlation with depth (R2= 0.88): -9.46‰ at 60cm to -5.4‰ at 112cm. δ18O of shells show no correlation with depth and range from - 3.34‰ to 0.62‰. Excluding one shell analysis, δ13C of shells and SOM exhibit good correlation (R2= 0.80). Previous studies of variation in δ13C in land snail shell document that carbon isotopic composition in shell are primarily a function of snail diet. Balakrishnan et al. (2005) have shown that δ13C of shells in C3 vegetation regimes range from -10.0‰ to -8.8‰, which is consistent with our results. Although, the interpretation of δ18O values in land snails is not straightforward, values are probably related to several different

  3. Evaluation of the Community Multiscale Air Quality (CMAQ) modeling system against size-resolved measurements of inorganic particle composition across sites in North America

    EPA Science Inventory

    This work evaluates particle size-composition distributions simulated by the Community Multiscale Air Quality (CMAQ) model using Micro-Orifice Uniform Deposit Impactor (MOUDI) measurements at 18 sites across North America. Size-resolved measurements of particulate SO4<...

  4. Structure and composition of vegetation of longleaf pine plantations compared to natural stands occurring along an environmental gradient at the Savannah River Site.

    SciTech Connect

    Smith, Gregory, P.; Shelburne, Victor, B.; Walker, Joan, L.

    2001-12-30

    Study plots in 33-43 year old longleaf pine plantations were compared to remnant longleaf plots on the Savannah River Site in South Carolina. Within these stands, the structure and composition of primarily the herb layer relative to a presumed soil moisture or soil texture gradient was studied using the North Carolina Vegetation Survey methodology. Data were also collected on soils and landform variables. Based on ordination and cluster analyses, both plantation plots and natural stand plots were separated into three distinct site units (xeric, sub-xeric, and sub-mesic). Lack of a major compositional difference between xeric plantation and natural longleaf sites suggests that restoration of the herbaceous layer may not be as complex as once thought. This provides reasonable encouragement for the restoration of the longleaf pine ecosystem.

  5. Correspondence and Least Squares Analyses of Soil and Rock Compositions for the Viking Lander 1 and Pathfinder Sites

    NASA Technical Reports Server (NTRS)

    Larsen, K. W.; Arvidson, R. E.; Jolliff, B. L.; Clark, B. C.

    2000-01-01

    Correspondence and Least Squares Mixing Analysis techniques are applied to the chemical composition of Viking 1 soils and Pathfinder rocks and soils. Implications for the parent composition of local and global materials are discussed.

  6. Chemical composition and mass size distribution of PM1 at an elevated site in central east China

    NASA Astrophysics Data System (ADS)

    Zhang, Y. M.; Zhang, X. Y.; Sun, J. Y.; Hu, G. Y.; Shen, X. J.; Wang, Y. Q.; Wang, T. T.; Wang, D. Z.; Zhao, Y.

    2014-11-01

    Size-resolved aerosol chemical compositions were measured continuously for 1.5 years from June 2010 to January 2012 with an aerosol mass spectrometer (AMS) to characterize the mass and size distributions (MSDs) of major chemical components in submicron particles (approximately PM1) at Mountain Tai (Mt. Tai), an elevated site in central east China. The annual mean mass concentrations of organic, sulfate, nitrate, ammonium, and chloride were 11.2, 9.2, 7.2, 5.8, and 0.95 μg m-3, respectively, which are much higher than those at most mountain sites in the USA and Europe, but lower than those at the nearby surface rural sites in China. A clear seasonality was observed for all major components throughout the study, with low concentration in fall and high in summer, and is believed to be caused by seasonal variations in planetary boundary layer (PBL) height, near surface pollutant concentrations and regional transport processes. Air masses were classified into categories impacted by PBL, lower free troposphere (LFT), new particle formation (NPF), in-cloud processes, and polluted aerosols. Organics dominated the PM1 mass during the NPF episodes, while sulfate contributed most to PM1 in cloud events. The average MSDs of particles between 30 and 1000 nm during the entire study for organics, sulfate, nitrate, and ammonium were approximately log-normal with mass median diameters (MMDs) of 539, 585, 542, and 545 nm, respectively. These values are slightly larger than those observed at ground sites within the North China Plain (NCP), likely due to the relative aged and well-mixed aerosol masses at Mt. Tai. There were no obvious differences in MMDs during the PBL, LFT, in-cloud and polluted episodes, but smaller MMDs, especially for organics, were observed during the NPF events. During the PBL, NPF, and polluted episodes, organics accounted for major proportions at smaller modes, and reached 70% at 100-200 nm particles in the polluted events. In cloud episodes, inorganics

  7. 2008 Annual Summary Report for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site, Nye County, Nevada: Review of the Performance Assessments and Composite Analyses

    SciTech Connect

    NSTec Environmental Management

    2009-03-30

    The Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site requires an annual review to assess the adequacy of the Performance Assessments (PAs) and Composite Analyses (CAs) for each of the facilities, with the results submitted annually to U.S. Department of Energy (DOE) Headquarters. The Disposal Authorization Statements for the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) also require that such reviews be made and that secondary or minor unresolved issues be tracked and addressed as part of the maintenance plan. The U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office (NNSA/NSO) performed an annual review in fiscal year (FY) 2008 by evaluating operational factors and research results that impact the continuing validity of the PAs and CAs. This annual summary report presents data and conclusions from the FY 2008 review, and determines the adequacy of the PAs and CAs. Operational factors (e.g., waste forms and containers, facility design, and waste receipts), closure plans, monitoring results, and research and development (R&D) activities were reviewed to determine the adequacy of the PAs. Likewise, the environmental restoration activities at the Nevada Test Site relevant to the sources of residual radioactive material that are considered in the CAs, the land-use planning, and the results of the environmental monitoring and R&D activities were reviewed to determine the adequacy of the CAs.

  8. Mass, black carbon and elemental composition of PM2.5 at an industrial site in Kingston, Jamaica

    NASA Astrophysics Data System (ADS)

    Boman, Johan; Gaita, Samuel M.

    2015-11-01

    An estimated three million premature deaths yearly can be attributed to ambient particulate pollution, a majority of them in low and middle income countries. The rapid increase in the vehicle fleet in urban areas of the Caribbean countries have experienced contributes to the bad urban air quality. In this study aerosol particles with an aerodynamic diameter smaller than, or equal to, 2.5 μm (PM2.5) were collected over 24 h at a site along Spanish Town Road, one of the main commuter roads in Kingston, Jamaica. The study was aimed at determining the mass, black carbon and elemental composition of PM2.5 in Kingston. Although lead in the gasoline was phased out in the year 2000, up to 5000 ppm of sulfur is still allowed in the diesel, leading to an extensive secondary particle formation. PM2.5 samples were collected using a Mini-vol sampler between 12 December 2013 and 21 March 2014 and analyzed for trace elements using the Particle-Induced X-ray Emission (PIXE) facility at Lund University, Sweden. Concentrations of Si, S, Cl, K, Ca, Ti, V, Cr, Fe, Ni, Cu, Zn, Br and Pb were determined. Elemental concentrations showed a high temporal variation and the average PM2.5 concentration (44 μg m-3) is higher than the air quality standards that apply in the European Union (25 μg m-3) and in the USA (12 μg m-3). From this we can conclude that the air quality in the area is severely influenced by PM2.5 pollution and that there is a need to develop plans for improving the air quality in Kingston city.

  9. Application of Aerosol Hygroscopicity Measured at the Atmospheric Radiation Measurement Program's Southern Great Plains Site to Examine Composition and Evolution

    NASA Technical Reports Server (NTRS)

    Gasparini, Roberto; Runjun, Li; Collins, Don R.; Ferrare, Richard A.; Brackett, Vincent G.

    2006-01-01

    A Differential Mobility Analyzer/Tandem Differential Mobility Analyzer (DMA/TDMA) was used to measure submicron aerosol size distributions, hygroscopicity, and occasionally volatility during the May 2003 Aerosol Intensive Operational Period (IOP) at the Central Facility of the Atmospheric Radiation Measurement Program's Southern Great Plains (ARM SGP) site. Hygroscopic growth factor distributions for particles at eight dry diameters ranging from 0.012 micrometers to 0.600 micrometers were measured throughout the study. For a subset of particle sizes, more detailed measurements were occasionally made in which the relative humidity or temperature to which the aerosol was exposed was varied over a wide range. These measurements, in conjunction with backtrajectory clustering, were used to infer aerosol composition and to gain insight into the processes responsible for evolution. The hygroscopic growth of both the smallest and largest particles analyzed was typically less than that of particles with dry diameters of about 0.100 micrometers. It is speculated that condensation of secondary organic aerosol on nucleation mode particles is largely responsible for the minimal hygroscopic growth observed at the smallest sizes considered. Growth factor distributions of the largest particles characterized typically contained a nonhygroscopic mode believed to be composed primarily of dust. A model was developed to characterize the hygroscopic properties of particles within a size distribution mode through analysis of the fixed size hygroscopic growth measurements. The performance of this model was quantified through comparison of the measured fixed size hygroscopic growth factor distributions with those simulated through convolution of the size-resolved concentration contributed by each of the size modes and the mode-resolved hygroscopicity. This transformation from sizeresolved hygroscopicity to mode-resolved hygroscopicity facilitated examination of changes in the hygroscopic

  10. Temporal variability of atmospheric particulate matter and chemical composition during a growing season at an agricultural site in northeastern China.

    PubMed

    Chen, Weiwei; Tong, Daniel; Zhang, Shichun; Dan, Mo; Zhang, Xuelei; Zhao, Hongmei

    2015-12-01

    This study presents the observations of PM10 and PM2.5 concentrations at an agricultural site from April to October 2012 in Dehui city, China. Ambient air was sampled by filter-based samplers and online PM monitors. The filter samples were analyzed to determine the abundance of ionic/inorganic elements, organic carbon (OC) and elemental carbon (EC). The daily PM10 concentrations varied significantly over the monitoring period, with an average of 168±63 (in the range of 52-277)μg/m(3) during the land preparation/planting period (26 April-15 June), 85±65 (36-228)μg/m(3) during the growing season (16 June-25 September), and 207±88 (103-310)μg/m(3) during the harvest period (26 September-31 October). PM2.5 accounted for 44%, 56% and 66% of atmospheric PM10 during these periods, respectively. The PM10 diurnal variation showed a distinct peak from 16:00 to 21:00 (LST) during the growing and harvesting seasons, while a gradual increase throughout the daytime until 17:00 was observed during tilling season. Mineral dust elements (Al, Ca, Fe, and Mg) dominated the PM10 chemical composition during the tilling season; OC, NO3(-), SO4(2-) and NH4(+) during the growing season; and carbonaceous species (i.e., OC and EC) during the harvesting season. Our results indicate that the soil particles emitted by farm tillage and organic matter released from straw burning are the two most significant sources of PM10 emissions contributing to the recurring high pollution events in this region. Therefore, development of agricultural PM inventories from soil tillage and straw burning is prioritized to support air quality modeling.

  11. Measurement and Modeling of Site-specific Nitrogen and Oxygen Isotopic Composition of Atmospheric Nitrous Oxide at Mace Head, Ireland

    NASA Astrophysics Data System (ADS)

    McClellan, M. J.; Saikawa, E.; Prinn, R. G.; Ono, S.

    2015-12-01

    Global mixing ratios of atmospheric nitrous oxide (N2O), a potent greenhouse gas, have increased nearly linearly from the beginning of the modern industrial period to today, with the current global average in excess of 325 ppb. This increase can be largely attributed to anthropogenic activity above the level of N2O emissions from natural biotic sources. The effect of N2O on Earth's climate is twofold: in the troposphere, N2O is radiatively active and chemically inert, while it serves as a reactive source of ozone-destroying nitrogen oxides in the stratosphere. The marked altitudinal divide in its reactivity means that all stages in the N2O life cycle—emission, transport, and destruction—must be examined to understand the overall effect of N2O on Earth's climate. However, the understanding of the total impact of N2O is incomplete, as there remain significant uncertainties in the global budget of this gas. Due to unique isotopic substitutions (15N and 18O) made by different N2O sources and stratospheric chemical reactions, the measurement of N2O isotopic ratios in ambient air can help identify the distribution and magnitude of distinct source types. We present the first year of site-specific nitrogen and oxygen isotopic composition data from the MIT Stheno-tunable infrared direct absorption spectroscopy (TILDAS) instrument at Mace Head, Ireland. Aided by the Stheno preconcentration system, Stheno-TILDAS can achieve measurement precisions of 0.10‰ or greater for all isotopic ratios (δ15N and δ18O) in ambient N2O. We further compare these data to the results from Model for Ozone and Related Tracers version 4 (MOZART-4) simulations, including N2O isotopic fractionation processes and MERRA/GEOS-5 reanalysis meteorological fields. These results will form the basis of future Bayesian inverse modeling simulations that will constrain global N2O source, circulation, and sink dynamics better.

  12. Composites

    NASA Astrophysics Data System (ADS)

    Taylor, John G.

    The Composites market is arguably the most challenging and profitable market for phenolic resins aside from electronics. The variety of products and processes encountered creates the challenges, and the demand for high performance in critical operations brings value. Phenolic composite materials are rendered into a wide range of components to supply a diverse and fragmented commercial base that includes customers in aerospace (Space Shuttle), aircraft (interiors and brakes), mass transit (interiors), defense (blast protection), marine, mine ducting, off-shore (ducts and grating) and infrastructure (architectural) to name a few. For example, phenolic resin is a critical adhesive in the manufacture of honeycomb sandwich panels. Various solvent and water based resins are described along with resin characteristics and the role of metal ions for enhanced thermal stability of the resin used to coat the honeycomb. Featured new developments include pultrusion of phenolic grating, success in RTM/VARTM fabricated parts, new ballistic developments for military vehicles and high char yield carbon-carbon composites along with many others. Additionally, global regional market resin volumes and sales are presented and compared with other thermosetting resin systems.

  13. Sorption testing and generalized composite surface complexation models for determining uranium sorption parameters at a proposed in-situ recovery site

    SciTech Connect

    Johnson, Raymond H.; Truax, Ryan A.; Lankford, David A.; Stone, James J.

    2016-02-03

    Solid-phase iron concentrations and generalized composite surface complexation models were used to evaluate procedures in determining uranium sorption on oxidized aquifer material at a proposed U in situ recovery (ISR) site. At the proposed Dewey Burdock ISR site in South Dakota, USA, oxidized aquifer material occurs downgradient of the U ore zones. Solid-phase Fe concentrations did not explain our batch sorption test results,though total extracted Fe appeared to be positively correlated with overall measured U sorption. Batch sorption test results were used to develop generalized composite surface complexation models that incorporated the full genericsorption potential of each sample, without detailed mineralogiccharacterization. The resultant models provide U sorption parameters (site densities and equilibrium constants) for reactive transport modeling. The generalized composite surface complexation sorption models were calibrated to batch sorption data from three oxidized core samples using inverse modeling, and gave larger sorption parameters than just U sorption on the measured solidphase Fe. These larger sorption parameters can significantly influence reactive transport modeling, potentially increasing U attenuation. Because of the limited number of calibration points, inverse modeling required the reduction of estimated parameters by fixing two parameters. The best-fit models used fixed values for equilibrium constants, with the sorption site densities being estimated by the inversion process. While these inverse routines did provide best-fit sorption parameters, local minima and correlated parameters might require further evaluation. Despite our limited number of proxy samples, the procedures presented provide a valuable methodology to consider for sites where metal sorption parameters are required. Furthermore, these sorption parameters can be used in reactive transport modeling to assess downgradient metal attenuation, especially when no other calibration

  14. Sorption testing and generalized composite surface complexation models for determining uranium sorption parameters at a proposed in-situ recovery site

    DOE PAGES

    Johnson, Raymond H.; Truax, Ryan A.; Lankford, David A.; ...

    2016-02-03

    Solid-phase iron concentrations and generalized composite surface complexation models were used to evaluate procedures in determining uranium sorption on oxidized aquifer material at a proposed U in situ recovery (ISR) site. At the proposed Dewey Burdock ISR site in South Dakota, USA, oxidized aquifer material occurs downgradient of the U ore zones. Solid-phase Fe concentrations did not explain our batch sorption test results,though total extracted Fe appeared to be positively correlated with overall measured U sorption. Batch sorption test results were used to develop generalized composite surface complexation models that incorporated the full genericsorption potential of each sample, without detailedmore » mineralogiccharacterization. The resultant models provide U sorption parameters (site densities and equilibrium constants) for reactive transport modeling. The generalized composite surface complexation sorption models were calibrated to batch sorption data from three oxidized core samples using inverse modeling, and gave larger sorption parameters than just U sorption on the measured solidphase Fe. These larger sorption parameters can significantly influence reactive transport modeling, potentially increasing U attenuation. Because of the limited number of calibration points, inverse modeling required the reduction of estimated parameters by fixing two parameters. The best-fit models used fixed values for equilibrium constants, with the sorption site densities being estimated by the inversion process. While these inverse routines did provide best-fit sorption parameters, local minima and correlated parameters might require further evaluation. Despite our limited number of proxy samples, the procedures presented provide a valuable methodology to consider for sites where metal sorption parameters are required. Furthermore, these sorption parameters can be used in reactive transport modeling to assess downgradient metal attenuation, especially when no other

  15. 2009 Annual Summary Report for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site, Nye County, Nevada: Review of the Performance Assessments and Composite Analysis

    SciTech Connect

    NSTec Environmental Management

    2010-03-15

    The U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office performed an annual review of the Area 3 and Area 5 Radioactive Wate Management Site (RWMS) Performance Assessments (PAs) and Composite Analyses (CAs) in fiscal year (FY) 2009. This annual summary report presents data and conclusions from the FY 2009 review, and determines the adequacy of the PAs and CAs. Operational factors (e.g., waste forms and containers, facility design, and waste receipts), closure plans, monitoring results, and research and development (R&D) activities were reviewed to determine the adequacy of the PAs. Likewise, the environmental restoration activities at the Nevada Test Site relevant to the sources of residual radioactive material that are considered in the CAs, the land-use planning, and the results of the environmental monitoring and R&D activities were reviewed to determine the adequacy of the CAs.

  16. Bats Swarm Where They Hibernate: Compositional Similarity between Autumn Swarming and Winter Hibernation Assemblages at Five Underground Sites.

    PubMed

    van Schaik, Jaap; Janssen, René; Bosch, Thijs; Haarsma, Anne-Jifke; Dekker, Jasja J A; Kranstauber, Bart

    2015-01-01

    During autumn in the temperate zone of both the new and old world, bats of many species assemble at underground sites in a behaviour known as swarming. Autumn swarming behaviour is thought to primarily serve as a promiscuous mating system, but may also be related to the localization and assessment of hibernacula. Bats subsequently make use of the same underground sites during winter hibernation, however it is currently unknown if the assemblages that make use of a site are comparable across swarming and hibernation seasons. Our purpose was to characterize the bat assemblages found at five underground sites during both the swarming and the hibernation season and compare the assemblages found during the two seasons both across sites and within species. We found that the relative abundance of individual species per site, as well as the relative proportion of a species that makes use of each site, were both significantly correlated between the swarming and hibernation seasons. These results suggest that swarming may indeed play a role in the localization of suitable hibernation sites. Additionally, these findings have important conservation implications, as this correlation can be used to improve monitoring of underground sites and predict the importance of certain sites for rare and cryptic bat species.

  17. Bats Swarm Where They Hibernate: Compositional Similarity between Autumn Swarming and Winter Hibernation Assemblages at Five Underground Sites

    PubMed Central

    van Schaik, Jaap; Janssen, René; Bosch, Thijs; Haarsma, Anne-Jifke; Dekker, Jasja J. A.; Kranstauber, Bart

    2015-01-01

    During autumn in the temperate zone of both the new and old world, bats of many species assemble at underground sites in a behaviour known as swarming. Autumn swarming behaviour is thought to primarily serve as a promiscuous mating system, but may also be related to the localization and assessment of hibernacula. Bats subsequently make use of the same underground sites during winter hibernation, however it is currently unknown if the assemblages that make use of a site are comparable across swarming and hibernation seasons. Our purpose was to characterize the bat assemblages found at five underground sites during both the swarming and the hibernation season and compare the assemblages found during the two seasons both across sites and within species. We found that the relative abundance of individual species per site, as well as the relative proportion of a species that makes use of each site, were both significantly correlated between the swarming and hibernation seasons. These results suggest that swarming may indeed play a role in the localization of suitable hibernation sites. Additionally, these findings have important conservation implications, as this correlation can be used to improve monitoring of underground sites and predict the importance of certain sites for rare and cryptic bat species. PMID:26153691

  18. Inducible scAAV2.GRE.MMP1 lowers IOP long-term in a large animal model for steroid-induced glaucoma gene therapy.

    PubMed

    Borrás, T; Buie, L K; Spiga, M G

    2016-05-01

    Current treatment of glaucoma relies on administration of daily drops or eye surgery. A gene therapy approach to treat steroid-induced glaucoma would bring a resolution to millions of people worldwide who depend on glucocorticoid therapy for a myriad of inflammatory disorders. Previously, we had characterized a short-term Adh.GRE.MMP1 gene vector for the production of steroid-induced MMP1 in the trabecular meshwork and tested reduction of elevated intraocular pressure (IOP) in a sheep model. Here we conducted a trial transferring the same transgene cassette to a clinically safe vector (scAAV2), and extended the therapeutic outcome to longer periods of times. No evidence of ocular and/or systemic toxicity was observed. Viral genome distributions showed potential reinducible vector DNAs in the trabecular meshwork (0.4 v.g. per cell) and negligible copies in six major internal organs (0.00002-0.005 v.g. per cell). Histological sections confirmed successful transduction of scAAV2.GFP to the trabecular meshwork. Optimization of the sheep steroid-induced hypertensive model revealed that topical ophthalmic drug difluprednate 0.05% (durezol) induced the highest IOP elevation in the shortest time. This is the first efficacy/toxicity study of a feasible gene therapy treatment of steroid-induced hypertension using clinically accepted self-complementary adeno-associated vectors (scAAV) vectors in a large animal model.

  19. Inducible scAAV2.GRE.MMP1 lowers IOP long-term in a large animal model for steroid-induced glaucoma gene therapy

    PubMed Central

    Borrás, Teresa; Buie, LaKisha K.; Spiga, Maria Grazia

    2016-01-01

    Current treatment of glaucoma relies on administration of daily drops or eye surgery. A gene therapy approach to treat steroid-induced glaucoma would bring a resolution to millions of people worldwide that depend on glucocorticoid therapy for a myriad of inflammatory disorders. Previously, we had characterized a short-term Adh.GRE.MMP1 gene vector for the production of steroid-induced MMP1 in the trabecular meshwork and tested reduction of elevated intraocular pressure (IOP) in a sheep model. Here we conducted a trial transferring the same transgene cassette to a clinically safe vector (scAAV2), and extended the therapeutic outcome to longer periods of times. No evidence of ocular and/or systemic toxicity was observed. Viral genome distributions showed potential re-inducible vector DNAs in the trabecular meshwork (0.4 vg/cell) and negligible copies in six major internal organs (0.00002-0.005 vg/cell). Histological sections confirmed successful transduction of scAAV2.GFP to the trabecular meshwork. Optimization of the sheep steroid–induced hypertensive model revealed that topical ophthalmic drug difluprednate 0.05% (durezol) induced the highest IOP elevation in the shortest time. This is the first efficacy/toxicity study of a feasible gene therapy treatment of steroid-induced hypertension using clinically accepted scAAV vectors in a large animal model. PMID:26855269

  20. Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the NTS

    SciTech Connect

    Vefa Yucel

    2007-01-03

    U.S. Department of Energy (DOE) Manual M 435.1-1 requires that performance assessments (PAs) and composite analyses (CAs) for low-level waste (LLW) disposal facilities be maintained by the field offices. This plan describes the activities performed to maintain the PA and the CA for the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) at the Nevada Test Site (NTS). This plan supersedes the Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site (DOE/NV/11718--491-REV 1, dated September 2002). The plan is based on U.S. Department of Energy (DOE) Order 435.1 (DOE, 1999a), DOE Manual M 435.1-1 (DOE, 1999b), the DOE M 435.1-1 Implementation Guide DOE G 435.1-1 (DOE, 1999c), and the Maintenance Guide for PAs and CAs (DOE, 1999d). The plan includes a current update on PA/CA documentation, a revised schedule, and a section on Quality Assurance.

  1. Summary of inorganic compositional data for groundwater, soil-water, and surface-water samples collected at the Headgate Draw subsurface drip irrigation site, Johnson County, Wyoming

    USGS Publications Warehouse

    Geboy, Nicholas J.; Engle, Mark A.; Schroeder, Karl T.; Zupancic, John W.

    2011-01-01

    As part of a 5-year project on the impact of subsurface drip irrigation (SDI) application of coalbed-methane (CBM) produced waters, water samples were collected from the Headgate Draw SDI site in the Powder River Basin, Wyoming, USA. This research is part of a larger study to understand short- and long-term impacts on both soil and water quality from the beneficial use of CBM waters to grow forage crops through use of SDI. This document provides a summary of the context, sampling methodology, and quality assurance and quality control documentation of samples collected prior to and over the first year of SDI operation at the site (May 2008-October 2009). This report contains an associated database containing inorganic compositional data, water-quality criteria parameters, and calculated geochemical parameters for samples of groundwater, soil water, surface water, treated CBM waters, and as-received CBM waters collected at the Headgate Draw SDI site.

  2. Summary of Inorganic Compositional Data for Groundwater, Soil-Water, and Surface-Water Samples at the Headgate Draw Subsurface Drip Irrigation Site

    SciTech Connect

    Geboy, Nicholas J.; Engle, Mark A.; Schroeder, Karl T.; Zupanic, John W.

    2007-01-01

    As part of a 5-year project on the impact of subsurface drip irrigation (SDI) application of coalbed-methane (CBM) produced waters, water samples were collected from the Headgate Draw SDI site in the Powder River Basin, Wyoming, USA. This research is part of a larger study to understand short- and long-term impacts on both soil and water quality from the beneficial use of CBM waters to grow forage crops through use of SDI. This document provides a summary of the context, sampling methodology, and quality assurance and quality control documentation of samples collected prior to and over the first year of SDI operation at the site (May 2008-October 2009). This report contains an associated database containing inorganic compositional data, water-quality criteria parameters, and calculated geochemical parameters for samples of groundwater, soil water, surface water, treated CBM waters, and as-received CBM waters collected at the Headgate Draw SDI site.

  3. Altered exoskeleton composition and vitellogenesis in the crustacean Gammarus sp. collected at polluted sites in the Saguenay Fjord, Quebec, Canada.

    PubMed

    Gagné, F; Blaise, C; Pellerin, J

    2005-05-01

    Gammarus sp. individuals were collected at four intertidal sites subjected to direct sources of pollution (marinas, ferry traffic, and harbors) and at one site with no direct source of pollution. Levels of vitellogenin-like proteins (Vtg), metallothioneins (MT), alkali-labile phosphates (ALPs) in proteins, and lipogenic enzyme activities (i.e., glucose-6-dehydrogenase, isocitrate dehydrogenase, and malate enzyme) were measured in whole soft tissues. In exoskeletons, levels of pH-dependent extractable protein and chitin were determined to assess the possible impacts of pollution on exoskeleton integrity and the molting process. Results show that males were consistently heavier than females regardless of site quality but that the whole-body weight of both sexes was significantly lower at polluted sites. Females displayed either induced or decreased Vtg-like proteins at polluted sites, indicating significant changes in gametogenesis activity. MT levels were not sex dependent and tended to be induced at all impacted sites. ALP levels in acetone-fractionated proteins indicate altered phosphate mobilization at some impacted sites, where females tended to display higher ALP levels. Lipogenic enzyme activities did not vary by sex but were readily increased at impacted sites, suggesting a delay in gonad maturation rates. Exoskeleton protein characteristics revealed that the proportion of chitin in exoskeletons was a lower at most impacted site, suggesting disruption of chitin and pH-dependent protein mobilization. Principal component analysis revealed that gammarids collected at affected sites displayed substantial changes in the proportion of chitin, arthropodin, sclerotin, MTs, and intermediary glucose metabolism (glucose-6-phosphate dehydrogenase, and isocitrate dehydrogenase in soft tissues) and thus suffered from disturbed gametogenesis and exoskeleton integrity.

  4. Influence of stocking, site quality, stand age, low-severity canopy disturbance, and forest composition on sub-boreal aspen mixedwood carbon stocks

    USGS Publications Warehouse

    Reinikainen, Michael; D’Amato, Anthony W.; Bradford, John B.; Fraver, Shawn

    2014-01-01

    Low-severity canopy disturbance presumably influences forest carbon dynamics during the course of stand development, yet the topic has received relatively little attention. This is surprising because of the frequent occurrence of such events and the potential for both the severity and frequency of disturbances to increase as a result of climate change. We investigated the impacts of low-severity canopy disturbance and average insect defoliation on forest carbon stocks and rates of carbon sequestration in mature aspen mixedwood forests of varying stand age (ranging from 61 to 85 years), overstory composition, stocking level, and site quality. Stocking level and site quality positively affected the average annual aboveground tree carbon increment (CAAI), while stocking level, site quality, and stand age positively affected tree carbon stocks (CTREE) and total ecosystem carbon stocks (CTOTAL). Cumulative canopy disturbance (DIST) was reconstructed using dendroecological methods over a 29-year period. DIST was negatively and significantly related to soil carbon (CSOIL), and it was negatively, albeit marginally, related to CTOTAL. Minima in the annual aboveground carbon increment of trees (CAI) occurred at sites during defoliation of aspen (Populus tremuloides Michx.) by forest tent caterpillar (Malacosoma disstria Hubner), and minima were more extreme at sites dominated by trembling aspen than sites mixed with conifers. At sites defoliated by forest tent caterpillar in the early 2000s, increased sequestration by the softwood component (Abies balsamea (L.) Mill. and Picea glauca (Moench) Voss) compensated for overall decreases in CAI by 17% on average. These results underscore the importance of accounting for low-severity canopy disturbance events when developing regional forest carbon models and argue for the restoration and maintenance of historically important conifer species within aspen mixedwoods to enhance stand-level resilience to disturbance agents and maintain

  5. Chemical compositions of some soils and rock types from the Apollo 15, 16, and 17 lunar sites

    NASA Technical Reports Server (NTRS)

    Nava, D. F.

    1974-01-01

    The major and minor element compositions of three Apollo 15 mare basalts, four Apollo 16 breccias, one soil, three Apollo 17 soils, one mare basalt, and one breccia have been determined by semimicro combined atomic absorption and colorimetric spectrophotometries. A discussion regarding analysis of small subsamples of coarse-grained lunar materials, such as certain Apollo 15 and 17 basalts, is given in which the suggestion is made that analytical methods designed to determine the bulk 'representative' chemical composition as well as the presence and extent of specimen heterogeneity are fundamentally necessary for a more complete understanding of genesis and history of lunar materials.

  6. Strontium Isotopic Composition of Paleozoic Carbonate Rocks in the Nevada Test Site Vicinity, Clark, Lincoln, and Nye Counties, Nevada and Inyo County, California.

    SciTech Connect

    James B. Paces; Zell E. Peterman; Kiyoto Futa; Thomas A. Oliver; and Brian D. Marshall.

    2007-08-07

    Ground water moving through permeable Paleozoic carbonate rocks represents the most likely pathway for migration of radioactive contaminants from nuclear weapons testing at the Nevada Test Site, Nye County, Nevada. The strontium isotopic composition (87Sr/86Sr) of ground water offers a useful means of testing hydrochemical models of regional flow involving advection and reaction. However, reaction models require knowledge of 87Sr/86Sr data for carbonate rock in the Nevada Test Site vicinity, which is scarce. To fill this data gap, samples of core or cuttings were selected from 22 boreholes at depth intervals from which water samples had been obtained previously around the Nevada Test Site at Yucca Flat, Frenchman Flat, Rainier Mesa, and Mercury Valley. Dilute acid leachates of these samples were analyzed for a suite of major- and trace-element concentrations (MgO, CaO, SiO2, Al2O3, MnO, Rb, Sr, Th, and U) as well as for 87Sr/86Sr. Also presented are unpublished analyses of 114 Paleozoic carbonate samples from outcrops, road cuts, or underground sites in the Funeral Mountains, Bare Mountain, Striped Hills, Specter Range, Spring Mountains, and ranges east of the Nevada Test Site measured in the early 1990's. These data originally were collected to evaluate the potential for economic mineral deposition at the potential high-level radioactive waste repository site at Yucca Mountain and adjacent areas (Peterman and others, 1994). Samples were analyzed for a suite of trace elements (Rb, Sr, Zr, Ba, La, and Ce) in bulk-rock powders, and 87Sr/86Sr in partial digestions of carbonate rock using dilute acid or total digestions of silicate-rich rocks. Pre-Tertiary core samples from two boreholes in the central or western part of the Nevada Test Site also were analyzed. Data are presented in tables and summarized in graphs; however, no attempt is made to interpret results with respect to ground-water flow paths in this report. Present-day 87Sr/86Sr values are compared to values

  7. Strontium Isotopic Composition of Paleozoic Carbonate Rocks in the Nevada Test Site Vicinity, Clark, Lincoln, and Nye Counties, Nevada, and Inyo County, California

    USGS Publications Warehouse

    Paces, James B.; Peterman, Zell E.; Futo, Kiyoto; Oliver, Thomas A.; Marshall, Brian D.

    2007-01-01

    Ground water moving through permeable Paleozoic carbonate rocks represents the most likely pathway for migration of radioactive contaminants from nuclear weapons testing at the Nevada Test Site, Nye County, Nevada. The strontium isotopic composition (87Sr/86Sr) of ground water offers a useful means of testing hydrochemical models of regional flow involving advection and reaction. However, reaction models require knowledge of 87Sr/86Sr data for carbonate rock in the Nevada Test Site vicinity, which is scarce. To fill this data gap, samples of core or cuttings were selected from 22 boreholes at depth intervals from which water samples had been obtained previously around the Nevada Test Site at Yucca Flat, Frenchman Flat, Rainier Mesa, and Mercury Valley. Dilute acid leachates of these samples were analyzed for a suite of major- and trace-element concentrations (MgO, CaO, SiO2, Al2O3, MnO, Rb, Sr, Th, and U) as well as for 87Sr/86Sr. Also presented are unpublished analyses of 114 Paleozoic carbonate samples from outcrops, road cuts, or underground sites in the Funeral Mountains, Bare Mountain, Striped Hills, Specter Range, Spring Mountains, and ranges east of the Nevada Test Site measured in the early 1990's. These data originally were collected to evaluate the potential for economic mineral deposition at the potential high-level radioactive waste repository site at Yucca Mountain and adjacent areas (Peterman and others, 1994). Samples were analyzed for a suite of trace elements (Rb, Sr, Zr, Ba, La, and Ce) in bulk-rock powders, and 87Sr/86Sr in partial digestions of carbonate rock using dilute acid or total digestions of silicate-rich rocks. Pre-Tertiary core samples from two boreholes in the central or western part of the Nevada Test Site also were analyzed. Data are presented in tables and summarized in graphs; however, no attempt is made to interpret results with respect to ground-water flow paths in this report. Present-day 87Sr/86Sr values are compared to values

  8. A pilot study on the chemical composition of rain water samples collected at five sites in Malaysia

    SciTech Connect

    Lim Sze Fook; Leong Chow Peng; Ayers, G.

    1996-12-31

    Results from previous studies indicated that acid deposition in Malaysia particularly in urban industrial areas is alarming. A 2-year privately funded study which was further extended by another 2 years showed very high acid deposition rates in Petaling Jaya, the Mang Valley Region. To examine the spatial distribution of acid deposition in the Mang Valley Region, three additional monitoring sites were established, two of these are within the valley and the third is just outside the valley, about 30 kilometers away from Petaling Jaya. The fifth monitoring site is located in Johor Baru, at the southern tip of Peninsular Malaysia near Singapore, a major source of sulfur dioxide. Preliminary results from these five monitoring sites are presented in this paper.

  9. Chemical Compositions of Precipitation at Three Non-urban Sites of Hebei Province, North China: Influence of Terrestrial Sources on Ionic Composition

    NASA Astrophysics Data System (ADS)

    Xu, Z.

    2015-12-01

    Rapid economic development and increased energy demand have resulted in severe air pollution problems throughout China, and the increasing emissions of SO2 and NOx have led to significant deposition of acid rain in China. Despite high SO2 concentrations are observed in both southern and northern China, acid rain is mainly observed in the south area in history. It is believed that high content of alkaline matters in the soil in the North China is one of the key factors that contribute to the neutralization of acidic ions in the rainwater. However, an increasing trend of the precipitation acidity was observed at many sites in North, Central and East China after 2000, with more pronounced trends in the Beijing-Tianjin region and Bohai Sea surrounding area. In this study, precipitations were collected from April to October in 2008 at three non-urban sites (Chicheng, Huailai and Xuanhua) in Hebei Province, North China. The pH values of precipitation events ranged from 4.08 to 7.53 for the three sampling sites. About 61.8% of the total precipitation had a pH value higher than 6.0. The predominant ions in the precipitation were SO42-, NO3- and Ca2+, and their concentrations were significantly higher than other sites in South China. The high concentration of acidic ions reflects that atmospheric pollution has already been severe in this area. The volume-weighted mean (VWM) concentration of major ions and pH value showed obvious seasonal differences, precipitation in dry season had high pH values and VWM concentrations of major ions. According to the equivalent ratio of NP/AP and the results of neutralization factors, the strong acid neutralization is mainly brought about by Ca2+ followed by NH4+ and Mg2+. Using Na as an indicator of marine origin, the proportions of sea salt and non-sea-salt were estimated from elemental ratios. Combining with the results of correlation analysis and enrichment factors, the main acidic ions (SO42- and NO3-) and NH4+ were mainly derived from

  10. Chemical composition of the major components of PM in different sites at the Metropolitan Region of Chile

    NASA Astrophysics Data System (ADS)

    Reyes, F.; Castillo, M. A.; Rubio, M.; Gramsch, E.; Vasquez, Y.; Oyola, P.

    2013-05-01

    Santiago, Chile's capital is one of most polluted megacity (5.5 million of people) of the world. Currently, PM2.5 annual concentration is over 2.2 times the Chilean standard (20 μg/m3). Continuous measurements of non-refractory PM1.0 (sulfate, nitrate, chloride, ammonium and organics aerosols), black carbon, and PM2,5 mass concentration were determined using Aerosol Chemical Speciation Monitor (ACSM, Aerodyne Research, Inc), absorption coefficient monitor (SIMCA, Santiago University) and dustrack monitor (TSI Inc) in order to know the temporal variability of the major components of PM. The measurements were carried out at kerbside, urban background, industrial and mixed residential/industrial locations during year 2012 and -2013. Meteorological data (Relative Humidity, temperature, wind speed, wind direction and precipitations) were obtained from the air quality network operated by the environmental authority. The results show strong correlation with the metropolitan region major sources. Multiple regression analysis indicates that precipitations have a strong impact on PM1.0 soluble components; relative humidity has effects only on chloride, sulfate and black carbon. Chloride concentration decrease when temperature is increasing. The perceptual contribution of each component is similar among all sites. All sites shows that OA (Organics Aerosol) as the major constituent of PM1.0 (>50%), followed of nitrates (>13%). Sulfate could be used to differentiate the industrial site; due to there is a strong impact of SO2 emission. Combustion sources direct impact can be seen at BC contribution at industrial and kerbside site. Also, the OA/BC ratio shows slow value at kerbside (3.05) and industrial (3.26) site, and higher at urban background site (4.15). Aged organics aerosols are majority found at all sites (f43/f44 plot), indicating that regional background is strong in all results. These results will be compared with size distribution measurements available from previous

  11. Retrospection-Simulation-Revision: Approach to the Analysis of the Composition and Characteristics of Medical Waste at a Disaster Relief Site

    PubMed Central

    Zhang, Li; Wu, Lihua; Tian, Feng; Wang, Zheng

    2016-01-01

    A large amount of medical waste is produced during disaster relief, posing a potential hazard to the habitat and the environment. A comprehensive understanding of the composition and characteristics of medical waste that requires management is one of the most basic steps in the development of a plan for medical waste management. Unfortunately, limited reliable information is available in the open literature on the characteristics of the medical waste that is generated at disaster relief sites. This paper discusses the analysis of the composition and characteristics of medical waste at a disaster relief site using the retrospection-simulation-revision method. For this study, we obtained 35 medical relief records of the Wenchuan Earthquake, Sichuan, May 2008 from a field cabin hospital. We first present a retrospective analysis of the relief medical records, and then, we simulate the medical waste generated in the affected areas. We ultimately determine the composition and characteristics of medical waste in the affected areas using untreated medical waste to revise the composition of the simulated medical waste. The results from 35 cases showed that the medical waste generated from disaster relief consists of the following: plastic (43.2%), biomass (26.3%), synthetic fiber (15.3%), rubber (6.6%), liquid (6.6%), inorganic salts (0.3%) and metals (1.7%). The bulk density of medical relief waste is 249 kg/m3, and the moisture content is 44.75%. The data should be provided to assist the collection, segregation, storage, transportation, disposal and contamination control of medical waste in affected areas. In this paper, we wish to introduce this research method of restoring the medical waste generated in disaster relief to readers and researchers. In addition, we hope more disaster relief agencies will become aware of the significance of medical case recording and storing. This may be very important for the environmental evaluation of medical waste in disaster areas, as

  12. Retrospection-Simulation-Revision: Approach to the Analysis of the Composition and Characteristics of Medical Waste at a Disaster Relief Site.

    PubMed

    Zhang, Li; Wu, Lihua; Tian, Feng; Wang, Zheng

    2016-01-01

    A large amount of medical waste is produced during disaster relief, posing a potential hazard to the habitat and the environment. A comprehensive understanding of the composition and characteristics of medical waste that requires management is one of the most basic steps in the development of a plan for medical waste management. Unfortunately, limited reliable information is available in the open literature on the characteristics of the medical waste that is generated at disaster relief sites. This paper discusses the analysis of the composition and characteristics of medical waste at a disaster relief site using the retrospection-simulation-revision method. For this study, we obtained 35 medical relief records of the Wenchuan Earthquake, Sichuan, May 2008 from a field cabin hospital. We first present a retrospective analysis of the relief medical records, and then, we simulate the medical waste generated in the affected areas. We ultimately determine the composition and characteristics of medical waste in the affected areas using untreated medical waste to revise the composition of the simulated medical waste. The results from 35 cases showed that the medical waste generated from disaster relief consists of the following: plastic (43.2%), biomass (26.3%), synthetic fiber (15.3%), rubber (6.6%), liquid (6.6%), inorganic salts (0.3%) and metals (1.7%). The bulk density of medical relief waste is 249 kg/m3, and the moisture content is 44.75%. The data should be provided to assist the collection, segregation, storage, transportation, disposal and contamination control of medical waste in affected areas. In this paper, we wish to introduce this research method of restoring the medical waste generated in disaster relief to readers and researchers. In addition, we hope more disaster relief agencies will become aware of the significance of medical case recording and storing. This may be very important for the environmental evaluation of medical waste in disaster areas, as

  13. Impact of moisture source regions on the isotopic composition of precipitation events at high-mountain continental site Kasprowy Wierch, southern Poland

    NASA Astrophysics Data System (ADS)

    Rozanski, Kazimierz; Chmura, Lukasz; Dulinski, Marek

    2016-04-01

    Five-year record of deuterium and oxygen-18 isotope composition of precipitation events collected on top of the Kasprowy Wierch mountain (49° 14'N, 19° 59'E, 1989 m a.s.l.) located in north-western High Tatra mountain ridge, southern Poland, is presented and discussed. In total 670 precipitation samples have been collected and analysed. Stable isotope composition of the analysed precipitation events varied in a wide range, from -2.9 to -26.6‰ for δ18O and from -7 to -195 ‰ for δ2H. The local meteoric water line (LMWL) defined by single events data (δ2H=(7.86±0.05)δ18O+(12.9±0.6) deviate significantly from the analogous line defined by monthly composite precipitation data available for IAEA/GNIP station Krakow-Balice (50o04'N, 19o55'E, 220 m a.s.l.), located ca. 100 km north of Kasprowy Wierch ((δ2H=(7.82±0.11)δ18O+(6.9±1.1). While slopes of those two LMWLs are statistically indistinguishable, the intercept of Kasprowy Wierch line is almost two times higher that that characterizing Krakow monthly precipitation. This is well-documented effect associated with much higher elevation of Kasprowy Wierch sampling site when compared to Krakow. The isotope data for Kasprowy Wierch correlate significantly with air temperature, with the slope of the regression line being equal 0.35±0.02 ‰oC for δ18O, whereas no significant correlation with precipitation amount could be established. The impact of moisture source regions on the isotopic composition of precipitation events collected at Kasprowy Wierch site was analysed using HYSPLITE back trajectory model. Five-days back trajectories were calculated for all analysed precipitation events and seasonal maps of trajectory distribution were produced. They illustrate changes in the prevailing transport patterns of air masses bringing precipitation to the sampling site. Back trajectories for the events yielding extreme isotopic composition of precipitation collected at Kasprowy Wierch were analyzed in detail

  14. COMPARISON OF THE SPECIATED VOC COMPOSITION AT SELECTED HOUSTON, TEXAS AREA SITES FOR THE YEARS 1978 AND 2000

    EPA Science Inventory

    Comparisons are presented for the C2-C12 volatile organic compounds (VOCs) observed at Houston area sites used for ambient air monitoring during special ozone field study programs conducted in 1978 and 2000. In 1978 the special study called the Houston Ozone Modeling Study cons...

  15. Igneous and Sedimentary Compositions from Four Landing Sites on Mars from the Alpha Particle X-Ray Spectrometer (APXS)

    NASA Astrophysics Data System (ADS)

    Gellert, R.; Arvidson, R. E.; Clark, B. C.; Mittlefehldt, D. W.; Morris, R. W.; Squyres, S. W.; VanBommel, S.

    2016-08-01

    The APXS on all four NASA Mars rovers returned data of ~1000 rocks and soils along the combined traverses of over 60 km. APXS data allow comparisons among landing sites, provide ground truth for orbiters and connections back to SNC meteorites.

  16. Comparative analysis of amino acid composition in the active site of nirk gene encoding copper-containing nitrite reductase (CuNiR) in bacterial spp.

    PubMed

    Adhikari, Utpal Kumar; Rahman, M Mizanur

    2017-04-01

    The nirk gene encoding the copper-containing nitrite reductase (CuNiR), a key catalytic enzyme in the environmental denitrification process that helps to produce nitric oxide from nitrite. The molecular mechanism of denitrification process is definitely complex and in this case a theoretical investigation has been conducted to know the sequence information and amino acid composition of the active site of CuNiR enzyme using various Bioinformatics tools. 10 Fasta formatted sequences were retrieved from the NCBI database and the domain and disordered regions identification and phylogenetic analyses were done on these sequences. The comparative modeling of protein was performed through Modeller 9v14 program and visualized by PyMOL tools. Validated protein models were deposited in the Protein Model Database (PMDB) (PMDB id: PM0080150 to PM0080159). Active sites of nirk encoding CuNiR enzyme were identified by Castp server. The PROCHECK showed significant scores for four protein models in the most favored regions of the Ramachandran plot. Active sites and cavities prediction exhibited that the amino acid, namely Glycine, Alanine, Histidine, Aspartic acid, Glutamic acid, Threonine, and Glutamine were common in four predicted protein models. The present in silico study anticipates that active site analyses result will pave the way for further research on the complex denitrification mechanism of the selected species in the experimental laboratory.

  17. Composition of olivine-rich gabbroic rocks at the Atlantis Massif (MAR 30°N,IODP site U1309D). In situ trace element geochemistry.

    NASA Astrophysics Data System (ADS)

    Drouin, M.; Godard, M.; Ildefonse, B.

    2006-12-01

    IODP Site U1309 was drilled at Atlantis Massif, an oceanic core complex located on the western flank of the Mid-Atlantic ridge at 30°N (IODP Expeditions 304 and 305). The 1415 m deep hole U1309D mostly recovered gabbroic rock types. Olivine-rich rocks (ol > 70%) represent 5.4% of the recovered rocks. Here, we present a multi-elemental study (LA-ICPMS) of ol-rich rocks and associated gabbros coming from four ol- rich zones along Hole U1309D. Ol-rich rocks have compositions that overlap the most primitive gabbroic rocks drilled at the Mid-Atlantic Ridge (23°N and 15°N) and at the Southwest Indian Ridge (ODP Hole 735B), with Mg# ranging from 83 to 90 and Ni contents up to 2400 ppm. These compositions reflect not only olivine abundance in these samples but also the primitive compositions of olivine (Mg# 84 to 88 and Ni = 1500-2300 ppm). Cpx associated mafic phases in ol-rich rocks have primitive compositions with high Mg# (85-89.5). In interstitial Cpx, TiO2 average contents vary from 0.3% in the cores to 0.5 to 0.7% in the rims. Poikilitic Cpx are also zoned. In zone 1 (300.91mbsf to 362.9 mbsf) plagioclase have the higher An contents (79-81.6 %). They have compositions of impregnated dunite. Cumulus Cpx and Plg in gabbro show no major elements variation between cores and rims. Cpx are depleted in trace element (on average <10 x PM), and have light REE depleted patterns (La < 1 Yb 10 x chondrites). They are in equilibrium with MORBs in both gabbros and ol-rich rocks. Cpx composition varies as a function of sample texture. Poikilitic Cpx show variable trace element contents in a single large grain (Yb normalized to chondrites: 7.5 ppm to 12.4 ppm), while cumulus Cpx show no variation. All rock types in the 4 olivine-rich zones are in the same range of trace element compositions. Gabbros have the more depleted composition (YbN: 5.7 to 10.5 ppm). Pl are also depleted in trace elements (<1 x PM) and REE (La < 1 - Yb 0.1 x chondrites) throughout the whole core. These

  18. Size-resolved aerosol composition at an urban and a rural site in the Po Valley in summertime: implications for secondary aerosol formation

    NASA Astrophysics Data System (ADS)

    Sandrini, Silvia; van Pinxteren, Dominik; Giulianelli, Lara; Herrmann, Hartmut; Poulain, Laurent; Facchini, Maria Cristina; Gilardoni, Stefania; Rinaldi, Matteo; Paglione, Marco; Turpin, Barbara J.; Pollini, Francesca; Bucci, Silvia; Zanca, Nicola; Decesari, Stefano

    2016-09-01

    The aerosol size-segregated chemical composition was analyzed at an urban (Bologna) and a rural (San Pietro Capofiume) site in the Po Valley, Italy, during June and July 2012, by ion-chromatography (major water-soluble ions and organic acids) and evolved gas analysis (total and water-soluble carbon), to investigate sources and mechanisms of secondary aerosol formation during the summer. A significant enhancement of secondary organic and inorganic aerosol mass was observed under anticyclonic conditions with recirculation of planetary boundary layer air but with substantial differences between the urban and the rural site. The data analysis, including a principal component analysis (PCA) on the size-resolved dataset of chemical concentrations, indicated that the photochemical oxidation of inorganic and organic gaseous precursors was an important mechanism of secondary aerosol formation at both sites. In addition, at the rural site a second formation process, explaining the largest fraction (22 %) of the total variance, was active at nighttime, especially under stagnant conditions. Nocturnal chemistry in the rural Po Valley was associated with the formation of ammonium nitrate in large accumulation-mode (0.42-1.2 µm) aerosols favored by local thermodynamic conditions (higher relative humidity and lower temperature compared to the urban site). Nocturnal concentrations of fine nitrate were, in fact, on average 5 times higher at the rural site than in Bologna. The water uptake by this highly hygroscopic compound under high RH conditions provided the medium for increased nocturnal aerosol uptake of water-soluble organic gases and possibly also for aqueous chemistry, as revealed by the shifting of peak concentrations of secondary compounds (water-soluble organic carbon (WSOC) and sulfate) toward the large accumulation mode (0.42-1.2 µm). Contrarily, the diurnal production of WSOC (proxy for secondary organic aerosol) by photochemistry was similar at the two sites but

  19. Chemical compositions of precipitation at three non-urban sites of Hebei Province, North China: Influence of terrestrial sources on ionic composition

    NASA Astrophysics Data System (ADS)

    Wu, Yao; Xu, Zhifang; Liu, Wenjing; Zhao, Tong; Zhang, Xuan; Jiang, Hao; Yu, Chong; Zhou, Li; Zhou, Xiaode

    2016-11-01

    Studies on precipitation chemistry were carried out from April to October in 2008 at three non-urban sites in North China. A total of 122 rainwater samples were collected, and all the samples were analyzed for pH, EC and major ions (F-, Cl-, NO3-, SO42 -, K+, Na+, Ca2 +, Mg2 +, and NH4+). The predominant ions in the precipitation were SO42 -, NO3- and Ca2 + at all sampling sites. The low VWM pH value (5.29) reflected the increasing air pollution in this region. But there was still more than 60% of the total precipitation had a pH value higher than 6.0, indicating the considerable neutralizing effects of alkaline aerosols in northern China. The volume-weighted mean (VWM) concentrations of major ions and pH values showed obvious seasonal differences, the precipitation had higher pH values and VWM concentrations of major ions in dry season. This is mainly attributed to the different sources of air masses in different seasons and the dilution effect on suspended particles. According to the equivalent ratio of [nssCa2 + + NH4+] / [nssSO42- + NO3-] and the results of neutralization factors, the strong acid neutralization was mainly brought about by Ca2 + followed by NH4+ and Mg2 +. Using Na as an indicator of marine origin, the proportions of sea salt and non-sea-salt were estimated from elemental ratios. Combining with the results of correlation analysis, the main acidic ions (SO42 - and NO3-) and NH4+ were mainly derived from anthropogenic activities, and Ca2 + and Mg2 + mostly originated from terrestrial sources. In general, the results reflect that terrestrial source was an important source of major cations in rainwater and strongly influenced the precipitation chemistry, especially in dry season.

  20. Field study of the composition of greywater and comparison of microbiological indicators of water quality in on-site systems.

    PubMed

    Leonard, Margaret; Gilpin, Brent; Robson, Beth; Wall, Katrina

    2016-08-01

    Thirty on-site greywater systems were sampled to determine greywater characteristics and practices in the field. Kitchen greywater was present at eight sites and urine was included at seven sites. These non-traditional sources resulted in significantly higher concentrations of enterococci and 5-day biochemical oxygen demand (BOD5) in greywater. Even with the removal of these sources, the concentrations of microbial indicators indicated high levels of contamination could occur across all greywater sources, including "light" greywater. Using multiple microbial indicators showed that all samples had the potential for faecal contamination. Bacteroidales markers were confirmed in treated greywater and in each greywater source, highlighting the potential for human faecal contamination. Although Escherichia coli was absent in treated greywater recycled to the house, other microbial indicators were present; hence, caution is required in using E. coli concentrations as the sole indicator of microbiological water quality. High BOD5 or total suspended solid concentrations exceeded the levels recommended for effective disinfection. Subsurface irrigation, which is assumed to provide a five-log reduction in exposure, is a suitable reuse option for non-disinfected greywater. Only half the occupants had a good understanding of their greywater systems and 25 % of systems were poorly maintained. Elevated microbial indicator contamination of greywater sludge is a potential hazard during maintenance.

  1. Study on the chemical composition features of Longquan celadon excavated from the Chuzhou site of Huai'an City in Jiangsu Province by EDXRF

    NASA Astrophysics Data System (ADS)

    Li, Li; Feng, Song-Lin; Feng, Xiang-Qian; Xu, Qing; Yan, Ling-Tong; Ma, Bo; Huo, Hua

    2011-07-01

    A mass of Longquan celadon shards were excavated from the Chuzhou site of Huai'an City in Jiangsu Province, China. These celadon shards were fired during the period of the Late Yuan Dynasty to the Tianshun era of the Ming Dynasty, as identified by archaeologists at Nanjing Museum. In order to research the chemical composition features of this ancient celadon porcelain, energy dispersive X-ray fluorescence (EDXRF) for non-destructive analysis was used to determine the chemical composition of the porcelain body and glaze in these shards. The results indicate that Ti and Fe in the body of Longquan celadon are characteristic elements which can distinguish porcelain produced during the Late Yuan Dynasty from those produced in the Ming Dynasties. The results of the principal component analysis (PCA) show that different body and glaze raw materials were used for the production of porcelain in different periods and the raw materials of the body and glaze are also different for various vessel shapes. The chemical compositions in the porcelain body of civilian ware are slightly different. The imperial and civilian Longquan celadon porcelains produced during the Hongwu era to the Tianshun era of the Ming Dynasty are distinguishable by the MnO, Fe2O3, Rb2O and SrO content in their porcelain glaze.

  2. HDL Glycoprotein Composition and Site-Specific Glycosylation Differentiates Between Clinical Groups and Affects IL-6 Secretion in Lipopolysaccharide-Stimulated Monocytes

    PubMed Central

    Krishnan, Sridevi; Shimoda, Michiko; Sacchi, Romina; Kailemia, Muchena J.; Luxardi, Guillaume; Kaysen, George A.; Parikh, Atul N.; Ngassam, Viviane N.; Johansen, Kirsten; Chertow, Glenn M.; Grimes, Barbara; Smilowitz, Jennifer T.; Maverakis, Emanual; Lebrilla, Carlito B.; Zivkovic, Angela M.

    2017-01-01

    The goal of this pilot study was to determine whether HDL glycoprotein composition affects HDL’s immunomodulatory function. HDL were purified from healthy controls (n = 13), subjects with metabolic syndrome (MetS) (n = 13), and diabetic hemodialysis (HD) patients (n = 24). Concentrations of HDL-bound serum amyloid A (SAA), lipopolysaccharide binding protein (LBP), apolipoprotein A-I (ApoA-I), apolipoprotein C-III (ApoC-III), α-1-antitrypsin (A1AT), and α-2-HS-glycoprotein (A2HSG); and the site-specific glycovariations of ApoC-III, A1AT, and A2HSG were measured. Secretion of interleukin 6 (IL-6) in lipopolysaccharide-stimulated monocytes was used as a prototypical assay of HDL’s immunomodulatory capacity. HDL from HD patients were enriched in SAA, LBP, ApoC-III, di-sialylated ApoC-III (ApoC-III2) and desialylated A2HSG. HDL that increased IL-6 secretion were enriched in ApoC-III, di-sialylated glycans at multiple A1AT glycosylation sites and desialylated A2HSG, and depleted in mono-sialylated ApoC-III (ApoC-III1). Subgroup analysis on HD patients who experienced an infectious hospitalization event within 60 days (HD+) (n = 12), vs. those with no event (HD−) (n = 12) showed that HDL from HD+ patients were enriched in SAA but had lower levels of sialylation across glycoproteins. Our results demonstrate that HDL glycoprotein composition, including the site-specific glycosylation, differentiate between clinical groups, correlate with HDL’s immunomodulatory capacity, and may be predictive of HDL’s ability to protect from infection. PMID:28287093

  3. Chemical Composition of Rocks and Soils at Gusev and Meridiani Landing Sites of the Mars Exploration Rovers: APXS Results and Implications.

    NASA Astrophysics Data System (ADS)

    Zipfel, J.; Team, A. S.

    2004-12-01

    The Alpha-Particle X-ray Spectrometers (APXS) are part of the instrument suites of both Mars Exploration Rovers, Spirit and Opportunity, which landed on Mars at Gusev crater and Meridiani Planum in the beginning of 2004. They are in-situ instruments for the determination of major and minor elements of soils, rocks, and outcrops. Soils at these landing sites are chemically characterized by high sulfur and chlorine contents, similar to soils at previous landing sites. Abundances of major and minor elements of all soils are very similar, strongly supporting the concept of global distribution and thorough mixing of soils on Mars. Locally, minor deviations from average soil composition are observed. These are attributed to the addition of local components to "global soil". In one trench at Gusev crater magnesium and sulfur concentrations increase with depth and give direct evidence for magnesium sulfate, possibly formed by weathering of olivine under acidic conditions, and local redistribution processes. Rocks at Gusev crater plains are primitive magnesium-rich basaltic rocks with normative olivine. They are coated to varying degrees with soil/dust and alteration rinds. Highly mobile elements are enriched in these outer layers. Outcrop materials at the base of the Colombia Hill site are possibly basaltic or volcaniclastic rocks. They are chemically highly altered as reflected by very high concentrations of water soluble elements (S, Cl, and Br), observed even after removal of a more than 8 mm thick surface layer. Apparently, the alteration extends to much greater depth. Outcrops at the Opportunity landing site were analyzed in Eagle crater and Endurance crater. These are light-toned sedimentary rocks of siliciclastic materials with up to 40 weight percent of sulfates. Based on mass balance calculations, in addition to Mg-sulfate and jarosite, other sulfates, e.g., Ca- and Al-bearing sulfates must be present. Outcrop rocks in Eagle crater are enriched in bromine relative

  4. Chemical Composition, Seasonal Variation and Size distribution of Atmospheric Aerosols at an Alpine Site in Guanzhong Plain, China

    NASA Astrophysics Data System (ADS)

    Li, J.

    2015-12-01

    PM10 and size-segregated aerosol samples were collected at Mt. Hua (2065 a.s.m) in central China, and determined for carbonaceous fraction, ions and organic composition. The concentration of most chemical compositions in summer are lower than those in winter, due to decreased emissions of biomass and coal burning for house heating. High temperature and relative humidity (RH) conditions are favorable for secondary aerosol formation, resulting in higher concentrations of SO42- and NH4+ in summer. Non-dehydrated sugars are increased in summer because of the enhanced metabolism. Carbon preference index results indicate that n-alkanes at Mt. Hua are derived mostly by plant wax. Low Benzo(a)pyrene/Benzo(a)pyrene ratios indicate that mountain aerosols are more aged. Concentrations of biogenic (BSOA, the isoprene/pinene/caryophyllene oxidation products) and anthropogenic (ASOA, mainly aromatic acids) SOA positively correlated with temperature . However, a decreasing trend of BSOA concentration with an increase in RH was observed during the sampling period, although a clear trend between ASOA and RH was not found. Based on the AIM Model calculation, we found that during the sampling period an increase in RH resulted in a decrease in the aerosol acidity and thus reduced the effect of acid-catalysis on BSOA formation. Size distributions of K+ and NH4+ present as an accumulation mode, in contrast to Ca2+ and Mg2+, which are mainly existed in coarse particles. SO42- and NO3- show a bimodal pattern. Dehydrated sugars, fossil fuel derived n-alkanes and PAHs presented unimode size distribution, whereas non-dehydrated sugars and plant wax derived n-alkanes showed bimodal pattern. Most of the determined BSOA are formed in the aerosol phase and enriched in the fine mode except for cis-pinonic acid, which is formed in the gas phase and subsequently partitioned into aerosol phase and thus presents a bimodal pattern with a major peak in the coarse mode.

  5. Geochemical Analyses of Surface and Shallow Gas Flux and Composition Over a Proposed Carbon Sequestration Site in Eastern Kentucky

    SciTech Connect

    Thomas Parris; Michael Solis; Kathryn Takacs

    2009-12-31

    Using soil gas chemistry to detect leakage from underground reservoirs (i.e. microseepage) requires that the natural range of soil gas flux and chemistry be fully characterized. To meet this need, soil gas flux (CO{sub 2}, CH{sub 4}) and the bulk (CO{sub 2}, CH{sub 4}) and isotopic chemistry ({delta}{sup 13}C-CO2) of shallow soil gases (<1 m, 3.3 ft) were measured at 25 locations distributed among two active oil and gas fields, an active strip mine, and a relatively undisturbed research forest in eastern Kentucky. The measurements apportion the biologic, atmospheric, and geologic influences on soil gas composition under varying degrees of human surface disturbance. The measurements also highlight potential challenges in using soil gas chemistry as a monitoring tool where the surface cover consists of reclaimed mine land or is underlain by shallow coals. For example, enrichment of ({delta}{sup 13}C-CO2) and high CH{sub 4} concentrations in soils have been historically used as indicators of microseepage, but in the reclaimed mine lands similar soil chemistry characteristics likely result from dissolution of carbonate cement in siliciclastic clasts having {delta}{sup 13}C values close to 0{per_thousand} and degassing of coal fragments. The gases accumulate in the reclaimed mine land soils because intense compaction reduces soil permeability, thereby impeding equilibration with the atmosphere. Consequently, the reclaimed mine lands provide a false microseepage anomaly. Further potential challenges arise from low permeability zones associated with compacted soils in reclaimed mine lands and shallow coals in undisturbed areas that might impede upward gas migration. To investigate the effect of these materials on gas migration and composition, four 10 m (33 ft) deep monitoring wells were drilled in reclaimed mine material and in undisturbed soils with and without coals. The wells, configured with sampling zones at discrete intervals, show the persistence of some of the

  6. Geographic and environmental sources of variation in bacterial community composition in a large-scale municipal landfill site in China.

    PubMed

    Song, Liyan; Yang, Shu; Liu, Hongjie; Xu, Jing

    2017-01-01

    Little is known regarding how bacterial communities assemble at landfill, as well as how the environment shapes the composition of bacterial community. In this study, up to 42 refuse samples from a large-scale landfill in China were physicochemically and phylogenetically investigated. 16S ribosomal RNA (rRNA) gene-based Illumina MiSeq sequencing (nine samples) revealed that representatives of Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Firmicutes, and Bacteroidetes were dominant in the refuse samples, which was similar to a previous study on landfill leachate by using 454 pyrosequencing. Although 741 operational taxonomic units (OTUs) were detected across all nine samples, 6 of these OTUs were detected in all of the data sets, suggesting difference between bacterial community structures. Geographical differences between the samples, irrespective of depths, were revealed by a principal component analysis (PCA) based on the terminal restriction fragment length polymorphism (TRFLP) profiles of 42 refuse samples. Redundancy analysis (RDA) suggested that environmental heterogeneity (pH, landfilling ages, and depths) and the abundance of bacteria (represented by 16S rRNA gene copy numbers) were the main drivers shaping the bacterial community structure.

  7. Depth, soil type, water table, and site effects on microbial community composition in sediments of pesticide-contaminated aquifer.

    PubMed

    Mattsson, Marja K; Liu, Xinxin; Yu, Dan; Kontro, Merja H

    2015-07-01

    Microbial community compositions in pesticide-contaminated aquifers have not been studied, although such information is important for remediation and maintaining freshwater sources clean under changing climate. Therefore, phospholipid (PLFAs), glycolipid (GLFAs), and neutral lipid (NLFAs) fatty acids were determined from sand and clay sediments at depths of 0.3-24.8 m, all contaminated with triazines and dichlobenil/2,6-dichlorobenzamide. The portion of fungi and Gram-negative bacteria at 0.3 m was greater than at 0.8 m, where the percentage of Gram-positive bacteria, actinobacteria, and sulfate-reducing bacteria (SRB) increased. In deeper sediments, microbial biomass, activity, and diversity decreased. Clay sediments seemed to serve as a reservoir for slow pesticide elution to groundwater, and their biomarker portion for all bacteria except actinobacteria was greater than in sand sediments. The slow pesticide dissipation seemed to occur in the main groundwater flow zone, resulting in nitrogen release simultaneously with organic matter elution from gardening and bank filtration. As a result, microbial biomass, activity, and diversity were increased. This shift in conditions towards that in surface soil may be appropriate for enhanced natural attenuation of pesticides in groundwater sources.

  8. Pore-Lining Composition and Capillary Breakthrough Pressure of Mudstone Caprocks: Sealing Efficiency of Geologic CO2 Storage Sites

    NASA Astrophysics Data System (ADS)

    Heath, J. E.; Dewers, T. A.; McPherson, B. J.; Kotula, P. G.

    2010-12-01

    Subsurface containment of CO2 is predicated on effective caprock sealing. Many previous studies have relied on macroscopic measurements of capillary breakthrough pressure and other petrophysical properties without direct examination of solid phases that line pore networks and directly contact fluids. However, pore-lining phases strongly contribute to sealing behavior through interfacial interactions among CO2, brine, and the mineral or non-mineral phases. Our high resolution (i.e., sub-micron) examination of the composition of pore-lining phases of several continental and marine mudstones indicates that sealing efficiency (i.e., breakthrough pressure) is governed by pore shapes and pore-lining phases that are not identifiable except through direct characterization of pores. Bulk X-ray diffraction data does not indicate which phases line the pores and may be especially lacking for mudstones with organic material. Organics can line pores and may represent once-mobile phases that modify the wettability of an originally clay-lined pore network. For shallow formations (i.e., < ~800 m depth), interfacial tension and contact angles result in breakthrough pressures that may be as high as those needed to fracture the rock—thus, in the absence of fractures, capillary sealing efficiency is indicated. Deeper seals have poorer capillary sealing if mica-like wetting dominates the wettability. We thank the U.S. Department of Energy’s National Energy Technology Laboratory and the Office of Basic Energy Sciences, and the Southeast and Southwest Carbon Sequestration Partnerships for supporting this work. Sandia National Laboratories is a multi-program laboratory operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Company, for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-AC04-94AL85000.

  9. Species composition of by-catch from milkfish (Chanos chanos) fry fishery in selected sites in the Philippines as determined by DNA barcodes.

    PubMed

    Asis, Angelli Marie Jacynth M; Destura, Irma; Santos, Mudjekeewis D

    2016-05-01

    Milkfish fry fishery, an important industry in the Philippines, uses non-selective fishing gears and push nets in coastal areas which lead to the capture of other non-targeted juvenile aquatic species. Unfortunately, information on the amount and the identity of by-catch species is lacking thus the extent of impact of the fry fishery is not known. In this study, the species composition of milkfish fry fishery by-catch sampled from selected coastal areas that are known to be fry collection sites in the country were identified and assessed through the use of DNA barcoding. Analyses revealed that by-catch fish species of the milkfish fry industry included Black Tiger shrimp (Peneaus monodon), Tarpon (Megalops cyprinoides), Glass perchlets (Ambasis gymnocephalus and Ambasis buruensis), Ladyfish (Elops hawaiensis), Snapper (Lutjanus fulviflamma), Cardinal fishes (Apogon hyalosoma and Sphaeramia orbicularis), Whipfin siver biddy (Gerres filamentosus), Mullet (Liza sp.), Anchovy (Encrasicholina heteroloba), and Tiger perch (Terapon jarbua), almost all of which are potential marketable food fish and culture species. The results of the study provide preliminary information, as well as awareness, on the species composition of milkfish fry by-catch.

  10. Strong Lithium Polysulfide Chemisorption on Electroactive Sites of Nitrogen-Doped Carbon Composites For High-Performance Lithium-Sulfur Battery Cathodes

    SciTech Connect

    Song, Jiangxuan; Gordin, Mikhail L.; Xu, Terrence; Chen, Shuru; Yu, Zhaoxin; Sohn, Hiesang; Lu, Jun; Ren, Yang; Duan, Yuhua; Wang, Donghai

    2015-03-27

    Despite the high theoretical capacity of lithium–sulfur batteries, their practical applications are severely hindered by a fast capacity decay, stemming from the dissolution and diffusion of lithium polysulfides in the electrolyte. A novel functional carbon composite (carbon-nanotube-interpenetrated mesoporous nitrogen-doped carbon spheres, MNCS/CNT), which can strongly adsorb lithium polysulfides, is now reported to act as a sulfur host. The nitrogen functional groups of this composite enable the effective trapping of lithium polysulfides on electroactive sites within the cathode, leading to a much improved electrochemical performance (1200 mAhg-1after 200 cycles). The enhancement in adsorption can be attributed to the chemical bonding of lithium ions by nitrogen functional groups in the MNCS/CNT framework. Furthermore, the micrometer-sized spherical structure of the material yields a high areal capacity (ca.6 mAhcm-2) with a high sulfur loading of approximately 5 mgcm-2, which is ideal for practical applications of the lithium–sulfur batteries.

  11. Changes in the Cytoplasmic Composition of Amino Acids and Proteins Observed in Staphylococcus aureus during Growth under Variable Growth Conditions Representative of the Human Wound Site

    PubMed Central

    Alreshidi, Mousa M.; Dunstan, R. Hugh; Gottfries, Johan; Macdonald, Margaret M.; Crompton, Marcus J.; Ang, Ching-Seng; Williamson, Nicholas A.; Roberts, Tim K.

    2016-01-01

    Staphylococcus aureus is an opportunistic pathogen responsible for a high proportion of nosocomial infections. This study was conducted to assess the bacterial responses in the cytoplasmic composition of amino acids and ribosomal proteins under various environmental conditions designed to mimic those on the human skin or within a wound site: pH6-8, temperature 35–37°C, and additional 0–5% NaCl. It was found that each set of environmental conditions elicited substantial adjustments in cytoplasmic levels of glutamic acid, aspartic acid, proline, alanine and glycine (P< 0.05). These alterations generated characteristic amino acid profiles assessed by principle component analysis (PCA). Substantial alterations in cytoplasmic amino acid and protein composition occurred during growth under conditions of higher salinity stress implemented via additional levels of NaCl in the growth medium. The cells responded to additional NaCl at pH 6 by reducing levels of ribosomal proteins, whereas at pH 8 there was an upregulation of ribosomal proteins compared with the reference control. The levels of two ribosomal proteins, L32 and S19, remained constant across all experimental conditions. The data supported the hypothesis that the bacterium was continually responding to the dynamic environment by modifying the proteome and optimising metabolic homeostasis. PMID:27442022

  12. Strong Lithium Polysulfide Chemisorption on Electroactive Sites of Nitrogen-Doped Carbon Composites For High-Performance Lithium–Sulfur Battery Cathodes

    SciTech Connect

    Song, Jiangxuan; Gordin, Mikhail; Xu, Terrence; Chen, Shuru; Yu, Zhaoxin; Sohn, Hiesang; Lu, Jun; Ren, Yang; Duan, Yuhua; wang, Donghai

    2015-03-27

    Despite the high theoretical capacity of lithium–sulfur batteries, their practical applications are severely hindered by a fast capacity decay, stemming from the dissolution and diffusion of lithium polysulfides in the electrolyte. A novel functional carbon composite (carbon-nanotube-interpenetrated mesoporous nitrogen-doped carbon spheres, MNCS/CNT), which can strongly adsorb lithium polysulfides, is now reported to act as a sulfur host. The nitrogen functional groups of this composite enable the effective trapping of lithium polysulfides on electroactive sites within the cathode, leading to a much improved electrochemical performance (1200 mAh g-1 after 200 cycles). The enhancement in adsorption can be attributed to the chemical bonding of lithium ions by nitrogen functional groups in the MNCS/CNT framework. Furthermore, the micrometer-sized spherical structure of the material yields a high areal capacity (ca. 6 mAh cm-2) with a high sulfur loading of approximately 5 mg cm-2, which is ideal for practical applications of the lithium–sulfur batteries.

  13. Genetic correlations among fatty acid compositions in different sites of fat tissues, meat production, and meat quality traits in Duroc pigs.

    PubMed

    Suzuki, K; Ishida, M; Kadowaki, H; Shibata, T; Uchida, H; Nishida, A

    2006-08-01

    This study estimated genetic parameters for fatty acids of different sites of fat tissue, meat production, and meat quality traits of Duroc pigs selected during 7 generations for ADG, LM area, backfat thickness (BF), and intramuscular fat (IMF). For this study, 394 barrows and 153 gilts were slaughtered at 105 kg of BW. High heritabilities for C18:0 of outer and inner subcutaneous fat tissue were estimated, respectively, as 0.54 and 0.51; those of intermuscular and intramuscular fat were 0.40 and 0.51, respectively. Genetic and phenotypic correlations of ADG and BF with saturated fatty acids of outer and inner subcutaneous fat were positive, but those with C16:1 and C18:2 were negative, and those with C18:1 were nearly zero. Genetic and phenotypic correlations between LM area and respective fatty acids showed opposite results. Respective genetic and phenotypic correlations of melting points with C18:0 and C18:1 were positive and high, and negative and high, respectively. Genetic correlations between cooking loss and SFA (C14:0, C16:0, and C18:0) of IMF were positive and moderate: 0.56, 0.47, and 0.47, respectively. On the other hand, monosaturated fatty acid of C18:1 was highly and negatively correlated with cooking loss (-0.61). Moreover, high genetic correlation between meat color (pork color standard and lightness) and fatty acid compositions of IMF suggest that the SFA (C14:0, C16:0, and C18:0) were correlated genetically with meat lightness and that unsaturated fatty acid compositions (C18:1 and C18:2) were correlated with meat darkness. Results of this study suggest that the fatty acid composition of adipose tissue is correlated genetically with meat production and meat quality traits.

  14. Site-specific N2O isotopic compositions from Brazilian Amazon soils and their implications for the global N2O isotope budget

    NASA Astrophysics Data System (ADS)

    Park, S.; Perez, T. J.; Thompson, A. E.; Boering, K. A.; Firestone, M. K.; Trumbore, S. E.; Tyler, S. C.

    2004-12-01

    The site-specific 15N signature of N2O (i.e., the 15N isotopic composition at the central or terminal position, expressed as δ 15Nα or δ 15Nβ ) from natural sources (e.g., tropical rain forest soils) remains poorly explored, despite indications from the few measurements available that the signature can be used for distinguishing microbiological N2O production mechanisms in soils and for reducing uncertainties in the global isotope budget. We present measurements of site-specific δ 15Nα , δ 15Nbulk (i.e., the average of the two N atom positions), and δ 18O of N2O of soil gas samples collected in March 2002 during the rainy season in the Tapajos National Forest (TNF), Para, Brazil and on N2O emissions from soil incubation experiments using the TNF soils and soils from Nova Vida Farm, Rondonia, Brazil. The microbiological and physical processes that could play roles in the observed distribution and variation of N2O isotopologues from the tropical forest soils will be discussed and compared with results for N2O produced in laboratory cultures of denitrifying bacteria and with stratospheric N2O observations. We then use the combination of data from tropical soils, bacterial cultures and the stratosphere to constrain the contribution of the tropical forest soils to the atmospheric N2O isotope budget.

  15. PM chemical composition and oxidative potential of the soluble fraction of particles at two sites in the urban area of Milan, Northern Italy

    NASA Astrophysics Data System (ADS)

    Perrone, Maria Grazia; Zhou, Jun; Malandrino, Mery; Sangiorgi, Giorgia; Rizzi, Cristiana; Ferrero, Luca; Dommen, Josef; Bolzacchini, Ezio

    2016-03-01

    Recent epidemiological evidence support the hypothesis that health effects from inhalation of air particles are governed by more than just particle mass, since specific chemical components have been identified as important contributors to mortality and hospitality admissions. We studied the chemical composition and the oxidative potential (OP) of total suspended particle (TSP) samples from Milan at two sites with different traffic loads: a site in the low emission zone (LEZ) and a traffic site (TR) outside. Two a-cellular assays; dithiothreitol (OPDTT) and 2‧,7' dichlorofluorescin (OPDCFH) were used to characterize the OP of the soluble fraction of particles. TSP samples from LEZ showed significantly lower concentrations of traffic-related chemical components compared to TR. The decrease in the concentrations from TR to LEZ was maximum for EC, with a LEZ/TR ratio of 0.64 (±0.18), and a significant reduction (p < 0.01) was also observed for PAHs (LEZ/TR = 0.73 ± 0.16), elements (Mn, Cu, Zn, Cd, Pb: LEZ/TR ranged between 0.64 and 0.82), OC (LEZ/TR = 0.85 ± 0.12) and NH4+ (LEZ/TR = 0.92 ± 0.07). OP measures, expressed as OP/m3 or OP/mg, were comparable between sites both for OPDTT and OPDCFH, thus not showing any significant impact of local traffic on OP values at sites. OPDTT and OPDCFH showed contrasting seasonal and daily trends, indicating that the two a-cellular assays gave complementary information on the OP of particles in Milan. The two OP assays resulted to be sensitive to different chemical properties of PM samples. OPDTT correlated positively only with Global Radiation (Spearman's rs = 0.38, p < 0.05), which could be considered as a proxy for high concentrations of secondary oxidizing organics, while OPDCFH was related to various PM chemical species, mainly correlated with total mass (rs = 0.65; p < 0.01), elements (e.g. Zn, rs = 0.67; As, rs = 0.65; p < 0.01) and the sum of sulfate and nitrate (rs = 0.63; p < 0.01), a proxy for secondary aerosol.

  16. Water soluble aerosols and gases at a UK background site - Part 1: Controls of PM2.5 and PM10 aerosol composition

    NASA Astrophysics Data System (ADS)

    Twigg, M. M.; Di Marco, C. F.; Leeson, S.; van Dijk, N.; Jones, M. R.; Leith, I. D.; Morrison, E.; Coyle, M.; Proost, R.; Peeters, A. N. M.; Lemon, E.; Frelink, T.; Braban, C. F.; Nemitz, E.; Cape, J. N.

    2015-07-01

    There is limited availability of long-term, high temporal resolution, chemically speciated aerosol measurements which can provide further insight into the health and environmental impacts of particulate matter. The Monitor for AeRosols and Gases (MARGA, Applikon B.V., NL) allows for the characterisation of the inorganic components of PM10 and PM2.5 (NH4+, NO3-, SO42-, Cl-, Na+, K+, Ca2+, Mg2+) and inorganic reactive gases (NH3, SO2, HCl, HONO and HNO3) at hourly resolution. The following study presents 6.5 years (June 2006 to December 2012) of quasi-continuous observations of PM2.5 and PM10 using the MARGA at the UK EMEP supersite, Auchencorth Moss, SE Scotland. Auchencorth Moss was found to be representative of a remote European site with average total water soluble inorganic mass of PM2.5 of 3.82 μg m-3. Anthropogenically derived secondary inorganic aerosols (sum of NH4+, NO3- and nss-SO42-) were the dominating species (63 %) of PM2.5. In terms of equivalent concentrations, NH4+ provided the single largest contribution to PM2.5 fraction in all seasons. Sea salt was the main component (73 %) of the PMcoarse fraction (PM10-PM2.5), though NO3- was also found to make a relatively large contribution to the measured mass (17 %) providing evidence of considerable processing of sea salt in the coarse mode. There was on occasions evidence of aerosol from combustion events being transported to the site in 2012 as high K+ concentrations (deviating from the known ratio in sea salt) coincided with increases in black carbon at the site. Pollution events in PM10 (defined as concentrations > 12 μg m-3) were on average dominated by NH4+ and NO3-, where smaller loadings at the site tended to be dominated by sea salt. As with other western European sites, the charge balance of the inorganic components resolved were biased towards cations, suggesting the aerosol was basic or more likely that organic acids contributed to the charge balance. This study demonstrates the UK

  17. Water soluble aerosols and gases at a UK background site - Part 1: Controls of PM2.5 and PM10 aerosol composition

    NASA Astrophysics Data System (ADS)

    Twigg, M. M.; Di Marco, C. F.; Leeson, S.; van Dijk, N.; Jones, M. R.; Leith, I. D.; Morrison, E.; Coyle, M.; Proost, R.; Peeters, A. N. M.; Lemon, E.; Frelink, T.; Braban, C. F.; Nemitz, E.; Cape, J. N.

    2015-02-01

    There is limited availability of long-term, high temporal resolution, chemically speciated aerosol measurements, which can lead to further insight into the health and environmental impacts of particulate matter. The Monitor for AeRosols and Gases (MARGA, Applikon B.V., NL) allows characterisation of the inorganic components of PM10 and PM2.5 (NH4+, NO3-, SO42-, Cl-, Na+, K+, Ca2+, Mg2+) and inorganic reactive gases (NH3, SO2, HCl, HONO and HNO3) at hourly resolution. The following study presents 6.5 years (June 2006 to December 2012) of quasi-continuous observations of PM2.5 and PM10 using the MARGA at the UK EMEP "Supersite", Auchencorth Moss, SE Scotland. Auchencorth Moss was found to be representative of a remote European site with average total water soluble inorganic mass of PM2.5 of 3.82 μg m-3. Anthropogenically derived secondary inorganic aerosols (sum of NH4+, NO3- and nss-SO42-), were the dominating species (63%) of PM2.5. In terms of equivalent concentrations, NH4+ provided the single largest contribution to PM2.5 fraction in all seasons. Sea salt, was the main component (73%) of the PMcoarse fraction (PM10-PM2.5), though NO3- was also found to make a relatively large contribution to the measured mass (17%) as providing evidence of considerable processing of sea salt in the coarse mode. There was on occasions evidence of aerosol from combustion events being transported to the site in 2012 as high K+ concentrations (deviating from the known ratio in sea salt) coincided with increases in black carbon at the site. Pollution events in PM10 (defined as concentrations > 12 μg m-3) were on average dominated by NH4+ and NO3-, where as smaller loadings at the site tended to be dominated by sea salt. As with other Western European sites, the charge balance of the inorganic components resolved were biased towards cations, suggesting the aerosol was basic or more likely, that organic acids contributed to the charge

  18. Trends of particulate matter (PM2.5) and chemical composition at a regional background site in the Western Mediterranean over the last nine years (2002-2010)

    NASA Astrophysics Data System (ADS)

    Cusack, M.; Alastuey, A.; Pérez, N.; Pey, J.; Querol, X.

    2012-09-01

    The time variability and long term trends of PM2.5 (particulate matter of diameter < 2.5 μm) at various regional background (RB) sites across Europe are studied and interpreted in this work. Data on mean annual levels of PM2.5 measured at Montseny (MSY, North East Spain) and various RB sites in Spain and Europe are evaluated and compared, and subsequently analysed for statistically significant trends. The MSY site registered higher average PM2.5 levels than those measured at a selection of other RB sites across Spain, Portugal, Germany and Scandinavia by percentage compared to the mean of all the stations in these countries, but lower than those measured in Switzerland, Italy and Austria. Reductions in PM2.5 were observed across all stations in Spain and Europe to varying degrees (7-49%). MSY underwent a statistically significant reduction since measurements began, indicating a year-on-year gradual decrease (-3.7 μg m-3, calculated from the final year of data compared to the mean). Similar trends were observed in other RB sites across Spain (-1.9 μg m-3). Reductions recorded in PM2.5 across Europe were varied, with many experiencing gradual, year-on-year decreases (-1.8 μg m-3). These reductions have been attributed to various causes: the introduction and implementation of pollution abatement strategies in EU member states, the effect of the current economic crisis on emissions of PM2.5 and the influence of meteorology observed during the winters of 2009 and 2010. In addition, the North Atlantic Oscillation (NAO), a large scale meteorological phenomenon most prevalent during winter, was observed to influence the frequency of Saharan dust intrusions across the Iberian Peninsula. Chemical composition of PM2.5 at MSY is characterised by high levels of organic matter (OM) and sulphate, followed by crustal material, nitrate and ammonia. Sea Spray and elemental carbon (EC) comprised a minor part of the total PM2.5 mass. Statistical trend analysis was performed on the

  19. 2013 Annual Summary Report for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada National Security Site, Nye County, Nevada; Review of the Performance Assessments and Composite Analyses

    SciTech Connect

    Shott, Gregory

    2014-03-01

    The Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site (National Security Technologies, LLC 2007a) requires an annual review to assess the adequacy of the performance assessments (PAs) and composite analyses (CAs), with the results submitted to the U.S. Department of Energy (DOE) Office of Environmental Management. The Disposal Authorization Statements for the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) also require that such reviews be made and that secondary or minor unresolved issues be tracked and addressed as part of the maintenance plan (DOE 1999a, 2000). The U.S. Department of Energy, National Nuclear Security Administration Nevada Field Office performed an annual review of the Area 3 and Area 5 RWMS PAs and CAs for fiscal year (FY) 2013. This annual summary report presents data and conclusions from the FY 2013 review, and determines the adequacy of the PAs and CAs. Operational factors (e.g., waste forms and containers, facility design, and waste receipts), closure plans, monitoring results, and research and development (R&D) activities were reviewed to determine the adequacy of the PAs. Likewise, the environmental restoration activities at the Nevada National Security Site (NNSS) relevant to the sources of residual radioactive material that are considered in the CAs, the land-use planning, and the results of the environmental monitoring and R&D activities were reviewed to determine the adequacy of the CAs. Important developments in FY 2013 include the following: • Development of a new Area 5 RWMS closure inventory estimate based on disposals through FY 2013 • Evaluation of new or revised waste streams by special analysis • Development of version 4.115 of the Area 5 RWMS GoldSim PA/CA model The Area 3 RWMS has been in inactive status since July 1, 2006, with the last shipment received in April 2006. The FY 2013 review of operations

  20. 2011 Annual Summary Report for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada National Security Site, Nye County, Nevada: Review of the Performance Assessments and Composite Analyses

    SciTech Connect

    NSTec Environmental Management

    2012-03-20

    The Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site (National Security Technologies, LLC, 2007a) requires an annual review to assess the adequacy of the Performance Assessments (PAs) and Composite Analyses (CAs), with the results submitted annually to U.S. Department of Energy (DOE) Office of Environmental Management. The Disposal Authorization Statements for the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) also require that such reviews be made and that secondary or minor unresolved issues be tracked and addressed as part of the maintenance plan (DOE, 1999a; 2000). The U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office performed an annual review of the Area 3 and Area 5 RWMS PAs and CAs for fiscal year (FY) 2011. This annual summary report presents data and conclusions from the FY 2011 review, and determines the adequacy of the PAs and CAs. Operational factors (e.g., waste forms and containers, facility design, and waste receipts), closure plans, monitoring results, and research and development (R and D) activities were reviewed to determine the adequacy of the PAs. Likewise, the environmental restoration activities at the Nevada National Security Site (NNSS) (formerly the Nevada Test Site) relevant to the sources of residual radioactive material that are considered in the CAs, the land-use planning, and the results of the environmental monitoring and R and D activities were reviewed to determine the adequacy of the CAs. Important developments in FY 2011 include the following: (1) Operation of a new shallow land disposal unit and a new Resource Conservation and Recovery Act (RCRA)-compliant lined disposal unit at the Area 5 RWMS; (2) Development of new closure inventory estimates based on disposals through FY 2011; (3) Evaluation of new or revised waste streams by special analysis; (4) Development of

  1. Assemblage Composition and Glacial-Interglacial Variations in Deep-Sea Ostracoda from the Eastern Equatorial Pacific (odp Site 1238) Over the Last 460 KA

    NASA Astrophysics Data System (ADS)

    Stepanova, A.; Lyle, M. W.

    2012-12-01

    We examine the benthic ostracod assemblages and their glacial-interglacial variations over the last 460 ka at ODP Site 1238 located ~200 km west of Ecuador at a water depth of 2203 m. Ages for Site 1238 were estimated by correlating its carbonate profile to cores v19-28 and v19-29, which have oxygen isotope age control. The CaCO3 profile for Site 1238 was generated by XRF scanning. For the 25-28 mcd interval of the core 1238 age was obtained by linear interpolation using a tie-point of 460 ka at 27.44 mcd. A total of three different assemblages were distinguished: glacial, interglacial and background. Glacial assemblage is characterized by higher total ostracod abundance, ostracod valve accumulation rates, and diversity. The typical glacial taxa here are Krithe spp., Legitimocythere castanea, Bradleya mesembrina, Cytheropteron spp. and Apatihowella (Fallacihowella) sol. Interglacial intervals are characterized by low abundance and diversity and the characteristic taxa are Pseudobosquetina mucronalata, Bradleya dictyon, Agrenocythere hazelae, Poseidonamicus major. A background assemblage is found throughout the entire record and consists of Krithe spp., Parakrithe sp., Ambocythere cf. sturgio and Rugocythereis sp. Taxonomic composition of the glacial assemblage suggests a deep sea environment with stronger influence of cold water from Antarctica (Circumpolar Deep Water) and higher oxygen content. Higher Corg MAR during glacials result in overall higher total abundance levels. The interglacial assemblage appears to be related to dissolution intervals. Although the characteristic taxa are not restricted to corrosive bottom waters, it is possible that only they can grow and reproduce in calcite undersaturated bottom waters. In the Equatorial Pacific interglacials are associated with increased dissolution and corrosiveness of bottom water. So, it seems natural that the low abundance low diversity interglacial assemblage of ostracods at Site 1238 reflects the

  2. Variation of particle number size distributions and chemical compositions at the urban and downwind regional sites in the Pearl River Delta during summertime pollution episodes

    NASA Astrophysics Data System (ADS)

    Yue, D. L.; Hu, M.; Wu, Z. J.; Guo, S.; Wen, M. T.; Nowak, A.; Wehner, B.; Wiedensohler, A.; Takegawa, N.; Kondo, Y.; Wang, X. S.; Li, Y. P.; Zeng, L. M.; Zhang, Y. H.

    2010-10-01

    In order to characterize the features of particulate pollution in the Pearl River Delta (PRD) in the summer, continuous measurements of particle number size distributions and chemical compositions were simultaneously performed at Guangzhou urban site (GZ) and Back-garden downwind regional site (BG) in July 2006. Particle number concentration from 20 nm to 10 μm at BG was (1.7±0.8)×104 cm-3, about 40% lower than that at GZ, (2.9±1.1)×104 cm-3. The total particle volume concentration at BG was 94±34 μm3 cm-3, similar to that at GZ, 96±43 μm3 cm-3. More 20-100 nm particles, significantly affected by the traffic emissions, were observed at GZ, while 100-660 nm particle number concentrations were similar at both sites as they are more regional. PM2.5 values were similar at GZ (69±43 μg m-3) and BG (69±58 μg m-3) with R2 of 0.71 for the daily average PM2.5 at these two sites, indicating the fine particulate pollution in the PRD region to be regional. Two kinds of pollution episodes, the accumulation pollution episode and the regional transport pollution episode, were observed. Fine particles over 100 nm dominated both number and volume concentrations of total particles during the late periods of these pollution episodes. Accumulation and secondary transformation are the main reasons for the nighttime accumulation pollution episode. SO42-, NO3- accounted for about 60% in 100-660 nm particle mass and PM2.5 increase. When south or southeast wind prevailed in the PRD region, regional transport of pollutants took place. Regional transport contributed about 30% to fine particulate pollution at BG during a regional transport case. Secondary transformation played an important role during regional transport, causing higher increase rates of secondary ions in PM1.0 than other species and shifting the peaks of sulfate and ammonium mass size distributions to larger sizes. SO42-, NO3-, and NH4+ accounted for about 70% and 40% of PM1.0 and PM2.5, respectively.

  3. Variations in the chemical composition of the submicron aerosol and in the sources of the organic fraction at a regional background site of the Po Valley (Italy)

    NASA Astrophysics Data System (ADS)

    Bressi, Michael; Cavalli, Fabrizia; Belis, Claudio A.; Putaud, Jean-Philippe; Fröhlich, Roman; Martins dos Santos, Sebastiao; Petralia, Ettore; Prévôt, André S. H.; Berico, Massimo; Malaguti, Antonella; Canonaco, Francesco

    2016-10-01

    Fine particulate matter (PM) levels and resulting impacts on human health are in the Po Valley (Italy) among the highest in Europe. To build effective PM abatement strategies, it is necessary to characterize fine PM chemical composition, sources and atmospheric processes on long timescales (> months), with short time resolution (< day), and with particular emphasis on the predominant organic fraction. Although previous studies have been conducted in this region, none of them addressed all these aspects together. For the first time in the Po Valley, we investigate the chemical composition of nonrefractory submicron PM (NR-PM1) with a time resolution of 30 min at the regional background site of Ispra during 1 full year, using the Aerodyne Aerosol Chemical Speciation Monitor (ACSM) under the most up-to-date and stringent quality assurance protocol. The identification of the main components of the organic fraction is made using the Multilinear-Engine 2 algorithm implemented within the latest version of the SoFi toolkit. In addition, with the aim of a potential implementation of ACSM measurements in European air quality networks as a replacement of traditional filter-based techniques, parallel multiple offline analyses were carried out to assess the performance of the ACSM in the determination of PM chemical species regulated by air quality directives. The annual NR-PM1 level monitored at the study site (14.2 µg m-3) is among the highest in Europe and is even comparable to levels reported in urban areas like New York City and Tokyo. On the annual basis, submicron particles are primarily composed of organic aerosol (OA, 58 % of NR-PM1). This fraction was apportioned into oxygenated OA (OOA, 66 %), hydrocarbon-like OA (HOA, 11 % of OA) and biomass burning OA (BBOA, 23 %). Among the primary sources of OA, biomass burning (23 %) is thus bigger than fossil fuel combustion (11 %). Significant contributions of aged secondary organic aerosol (OOA) are observed throughout the

  4. PM2.5 chemical composition at a rural background site in Central Europe, including correlation and air mass back trajectory analysis

    NASA Astrophysics Data System (ADS)

    Schwarz, Jaroslav; Cusack, Michael; Karban, Jindřich; Chalupníčková, Eva; Havránek, Vladimír; Smolík, Jiří; Ždímal, Vladimír

    2016-07-01

    PM2.5 mass concentrations and chemical compositions sampled over a 13-month period at a Central European rural background site (Košetice) are presented in this work. A comprehensive chemical analysis of PM2.5 was performed, which provided elemental composition (Al, Si, S, Cl, K, Ca, Ti, V, Cr, Mn, Fe, Ni, Cu, Zn, As, Se, Br, Rb, Sr, Y, Zr, and Pb) and the concentration of water-soluble inorganic anions (SO42 -, NO3-. Cl-, NO2-, Br-, and H2PO4-) and cations (Na+, NH4+, K+, Ca2 +, and Mg2 +), elemental and organic carbon (EC and OC), and levoglucosan. Spearman correlation coefficients between individual chemical species and particle number concentrations were calculated for the following six size ranges: 10-25 nm (N10-25), 25-50 nm (N25-50), 50-80 nm (N50-80), 80-150 nm (N80-150), 150-300 nm (N150-300), and 300-800 nm (N300-800). Average concentrations of individual species were comparable with concentrations reported from similar sites across Central Europe. Organic matter (OM) accounted for 45% of the PM2.5 mass (calculated from OC by a factor of 1.6), while the second most common component were secondary aerosols (SO42 -: 19%, NO3-: 14%, NH4+: 10%), which accounted for 43% of the mass. Based on levoglucosan analysis, 31% of OM was attributed to emissions associated with biomass burning (OMBB). EC concentrations, determined using the EUSAAR_2 thermal optical protocol, contributed 4% to PM2.5 mass. A total of 1% of the mass was attributed to a mineral matter source, while the remaining 6% was from an undetermined mass. Seasonal variations showed highest concentrations of NO3- and OMBB in winter, nitrate share in spring, and an increase in percentage of SO42 - and mineral matter in summer. The largest seasonal variation was found for species associated with wood and coal combustion (levoglucosan, K+, Zn, Pb, As), which had clear maxima during winter. Correlation analysis of different size fraction particle number concentrations was used to distinguish the influence

  5. An Advanced Reservoir Simulator for Tracer Transport in Multicomponent Multiphase Compositional Flow and Applications to the Cranfield CO2 Sequestration Site

    NASA Astrophysics Data System (ADS)

    Moortgat, J.

    2015-12-01

    Reservoir simulators are widely used to constrain uncertainty in the petrophysical properties of subsurface formations by matching the history of injection and production data. However, such measurements may be insufficient to uniquely characterize a reservoir's properties. Monitoring of natural (isotopic) and introduced tracers is a developing technology to further interrogate the subsurface for applications such as enhanced oil recovery from conventional and unconventional resources, and CO2 sequestration. Oak Ridge National Laboratory has been piloting this tracer technology during and following CO2 injection at the Cranfield, Mississippi, CO2 sequestration test site. Two campaigns of multiple perfluorocarbon tracers were injected together with CO2 and monitored at two wells at 68 m and 112 m from the injection site. The tracer data suggest that multiple CO2 flow paths developed towards the monitoring wells, indicative of either channeling through high permeability pathways or of fingering. The results demonstrate that tracers provide an important complement to transient pressure data. Numerical modeling is essential to further explain and interpret the observations. To aid the development of tracer technology, we enhanced a compositional multiphase reservoir simulator to account for tracer transport. Our research simulator uses higher-order finite element (FE) methods that can capture the small-scale onset of fingering on the coarse grids required for field-scale modeling, and allows for unstructured grids and anisotropic heterogeneous permeability fields. Mass transfer between fluid phases and phase behavior are modeled with rigorous equation-of-state based phase-split calculations. We present our tracer simulator and preliminary results related to the Cranfield experiments. Applications to noble gas tracers in unconventional resources are presented by Darrah et al.

  6. Offshore wind farms as productive sites or ecological traps for gadoid fishes?--impact on growth, condition index and diet composition.

    PubMed

    Reubens, Jan T; Vandendriessche, Sofie; Zenner, Annemie N; Degraer, Steven; Vincx, Magda

    2013-09-01

    With the construction of wind farms all across the North Sea, numerous artificial reefs are created. These windmill artificial reefs (WARs) harbour high abundances of fish species which can be attracted from elsewhere or can be the result of extra production induced by these wind farms. To resolve the attraction-production debate in suddenly altered ecosystems (cf. wind farms), the possible consequences of attraction should be assessed; thereby bearing in mind that ecological traps may arise. In this paper we investigated whether the wind farms in the Belgian part of the North Sea act as ecological traps for pouting and Atlantic cod. Length-at-age, condition and diet composition of fish present at the windmill artificial reefs was compared to local and regional sandy areas. Fish data from the period 2009-2012 were evaluated. Mainly I- and II-group Atlantic cod were present around the WARs; while the 0- and I-group dominated for pouting. For Atlantic cod, no differences in length were observed between sites, indicating that fitness was comparable at the WARs and in sandy areas. No significant differences in condition index were observed for pouting. At the WARs, they were slightly larger and stomach fullness was enhanced compared to the surrounding sandy areas. Also diet differed considerably among the sites. The outcome of the proxies indicate that fitness of pouting was slightly enhanced compared to the surrounding sandy areas. No evidence was obtained supporting the hypothesis that the WARs act as an ecological trap for Atlantic cod and pouting.

  7. Nuclear resonance vibrational spectroscopy reveals the FeS cluster composition and active site vibrational properties of an O2-tolerant NAD+-reducing [NiFe] hydrogenase

    DOE PAGES

    Lauterbach, Lars; Wang, Hongxin; Horch, Marius; ...

    2014-10-30

    Hydrogenases are complex metalloenzymes that catalyze the reversible splitting of molecular hydrogen into protons and electrons essentially without overpotential. The NAD+-reducing soluble hydrogenase (SH) from Ralstonia eutropha is capable of H2 conversion even in the presence of usually toxic dioxygen. The molecular details of the underlying reactions are largely unknown, mainly because of limited knowledge of the structure and function of the various metal cofactors present in the enzyme. Here, all iron-containing cofactors of the SH were investigated by 57Fe specific nuclear resonance vibrational spectroscopy (NRVS). Our data provide experimental evidence for one [2Fe2S] center and four [4Fe4S] clusters, whichmore » is consistent with the amino acid sequence composition. Only the [2Fe2S] cluster and one of the four [4Fe4S] clusters were reduced upon incubation of the SH with NADH. This finding explains the discrepancy between the large number of FeS clusters and the small amount of FeS cluster-related signals as detected by electron paramagnetic resonance spectroscopic analysis of several NAD+-reducing hydrogenases. For the first time, Fe–CO and Fe–CN modes derived from the [NiFe] active site could be distinguished by NRVS through selective 13C labeling of the CO ligand. This strategy also revealed the molecular coordinates that dominate the individual Fe–CO modes. The present approach explores the complex vibrational signature of the Fe–S clusters and the hydrogenase active site, thereby showing that NRVS represents a powerful tool for the elucidation of complex biocatalysts containing multiple cofactors.« less

  8. 2012 Annual Summary Report for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada National Security Site, Nye County, Nevada: Review of the Performance Assessments and Composite Analyses

    SciTech Connect

    Shott, G.

    2013-03-18

    The Maintenance Plan for the Performance Assessments and Composite Analyses for the Area 3 and Area 5 Radioactive Waste Management Sites at the Nevada Test Site (National Security Technologies, LLC 2007a) requires an annual review to assess the adequacy of the performance assessments (PAs) and composite analyses (CAs), with the results submitted to the U.S. Department of Energy (DOE) Office of Environmental Management. The Disposal Authorization Statements for the Area 3 and Area 5 Radioactive Waste Management Sites (RWMSs) also require that such reviews be made and that secondary or minor unresolved issues be tracked and addressed as part of the maintenance plan (DOE 1999a, 2000). The U.S. Department of Energy, National Nuclear Security Administration Nevada Site Office performed an annual review of the Area 3 and Area 5 RWMS PAs and CAs for fiscal year (FY) 2012. This annual summary report presents data and conclusions from the FY 2012 review, and determines the adequacy of the PAs and CAs. Operational factors (e.g., waste forms and containers, facility design, and waste receipts), closure plans, monitoring results, and research and development (R&D) activities were reviewed to determine the adequacy of the PAs. Likewise, the environmental restoration activities at the Nevada National Security Site (NNSS) relevant to the sources of residual radioactive material that are considered in the CAs, the land-use planning, and the results of the environmental monitoring and R&D activities were reviewed to determine the adequacy of the CAs. Important developments in FY 2012 include the following: Release of a special analysis for the Area 3 RWMS assessing the continuing validity of the PA and CA; Development of a new Area 5 RWMS closure inventory estimate based on disposals through FY 2012; Evaluation of new or revised waste streams by special analysis; and Development of version 4.114 of the Area 5 RWMS GoldSim PA model. The Area 3 RWMS has been in inactive status since

  9. Variation of particle number size distributions and chemical compositions at the urban and downwind regional sites in the Pearl River Delta during summertime pollution episodes

    NASA Astrophysics Data System (ADS)

    Yue, D. L.; Hu, M.; Wu, Z. J.; Guo, S.; Wen, M. T.; Nowak, A.; Wehner, B.; Wiedensohler, A.; Takegawa, N.; Kondo, Y.; Wang, X. S.; Li, Y. P.; Zeng, L. M.; Zhang, Y. H.

    2010-06-01

    In order to characterize the features of particulate pollution in the Pearl River Delta (PRD) in the summer, continuous measurements of particle number size distributions and chemical compositions were simultaneously performed at Guangzhou urban site (GZ) and Back-garden downwind regional site (BG) in July 2006. Particle number concentration from 20 nm to 10 μm at BG was (1.7±0.8)×104 cm-3, about 40% lower than that at GZ, (2.9±1.1)×104 cm-3 with intensive traffic emissions. The total particle volume concentration at BG was 94±34 μm3 cm-3, similar to that at GZ, 96±43 μm3 cm-3. More 20-100 nm particles, significantly affected by the traffic emissions, were observed at GZ, while 100-660 nm particle number concentrations were similar at both sites as they are more regional. PM2.5 values were also similar at GZ (69±43 μg m-3) and BG (69±58 μg m-3), indicating the fine particulate pollution in the PRD region to be regional. Two kinds of pollution episodes, the accumulation pollution episode and the regional transport pollution episode, were observed. Fine particles over 100 nm dominated both number and volume concentrations of total particles during the late periods of these pollution episodes. Accumulation and secondary transformations are two main reasons for the nighttime accumulation pollution episode. SO4-2, NO3-, and NH4+ accounted for about 60% in 100-660 nm particle mass and PM2.5. When south or south-southeast wind prevailed in the PRD region, regional transport of pollutants takes place. Regional transport contributed about 30% to fine particulate pollution at BG during a regional transport case. Secondary transformation played an important role during regional transport, causing higher increase rates of secondary ions in PM1.0 than other species and shifting the peaks of sulfate and ammonium mass size distributions to larger sizes. SO4-2, NO3-, and NH4+ accounted for about 70% and 40% of PM1.0 and PM2.5, respectively.

  10. Optimization of sedimentation of tungsten on copper substrate for production of 186gRe via 186W(p,n) nuclear reaction: Feasibility of using high current, long irradiation

    NASA Astrophysics Data System (ADS)

    Kakavand, T.; Mirzaii, M.; Khaleghi, M.; Eslami, M.

    2016-01-01

    Tungsten is recognized as one of the important metals used in cyclotron targets for production of several vital radioisotopes. Adequate adhesion of the prepared targets to its substrate is a significant parameter that makes them optimized for high current beam collisions. The target morphology should be paid special attention as another important parameter. In this work, a rather thick layer of tungsten is deposited on a copper substrate by sedimentation technique to produce 186gRe radionuclide via 186W(p,n) reaction. Consecutive sedimentation experiments are carried out to determine the best suspension solution. The prepared targets are evaluated in morphology by scanning electron microscope. A mixture of 1 g tungsten powder, 250 mg ethyl cellulose and 5 mL acetone is concluded for desirable target adhesion. Irradiation of the targets by 20 μA proton current (15 MeV energy) for 5 h shows that they can withstand the proton beam.

  11. Influence of marine, terrestrial and anthropogenic sources on ionic and metallic composition of rainwater at a suburban site (northwest coast of Spain)

    NASA Astrophysics Data System (ADS)

    Moreda-Piñeiro, Jorge; Alonso-Rodríguez, Elia; Moscoso-Pérez, Carmen; Blanco-Heras, Gustavo; Turnes-Carou, Isabel; López-Mahía, Purificación; Muniategui-Lorenzo, Soledad; Prada-Rodríguez, Darío

    2014-05-01

    In the present research, the rainwater chemistry of soluble (SF) and non-soluble (NSF) fractions is studied over a one a half year period (from March 2011 to August 2012) at a suburban site (Oleiros, A Coruña, Spain). The monthly rainfall in this region during the studied period ranged from 10 to 137 mm, while the NSF ranged from 0.9 to 54 mg L-1. More rainfall occurs within October-January. Eighteen samples, which provide information pertaining to the monthly variation in chemistry, were analyzed. Trace metals (Al, As, Ba, Co, Cu, Cr, Fe, Mn, Ni, Pb, Sr, V, Zn) were enclosed in the study of both fractions of the rainwater. Major inorganic ions (Cl-, NO3-, SO42-, Na+, K+, Ca2+, Mg2+ and NH4+) were also enclosed in the study of the SF of the rainwater. After partition coefficients analysis, univariate and principal components analysis (PCA) and air mass back trajectories analysis, three sources were found for the ionic and metal composition of the SF of rainwater; terrestrial (Ca2+, non sea salt SO42-, Al and Fe), marine (Mg2+, Na+, Cl-) and anthropogenic (K+, NH4+, NO3-, Fe, Mn, Pb, Sr, V and Zn). Results also suggest ubiquitous sources for Ba, Co, Cu, Cr and Ni. One source (terrestrial) was found for NSF of rainwater.

  12. Trends of particulate matter (PM2.5) and chemical composition at a regional background site in the Western Mediterranean over the last nine years (2002-2010)

    NASA Astrophysics Data System (ADS)

    Cusack, M.; Alastuey, A.; Pérez, N.; Pey, J.; Querol, X.

    2012-04-01

    The time variability and long term trends of PM2.5 (particulate matter of diameter <2.5 μm) at various regional background (RB) sites across Europe are studied and interpreted in this work. Long-term trends of PM2.5 concentrations are relatively scarce across Europe, with few studies outlining the changes measured in PM2.5 concentrations over a significant period of time. To this end, data on mean annual levels of PM2.5 measured at Montseny (MSY, North East Spain) and various RB sites in Spain and Europe are evaluated and compared, and subsequently analysed for statistically significant trends. The MSY site registered higher average PM2.5 levels than those measured at a selection of other RB sites across Spain, Portugal, Germany and Scandinavia, but lower than those measured in Switzerland, Italy and Austria. Reductions in PM2.5 were observed across all stations in Spain and Europe to varying degrees. MSY underwent a statistically significant reduction since measurements began, indicating a year-on-year gradual decrease (-3.7 μg m-3, calculated from the final year of data compared to the mean). Similar trends were observed in other RB sites across Spain (-1.9 μg m-3). Reductions recorded in PM2.5 across Europe were varied, with many experiencing gradual, year-on-year decreases (-1.8 μg m-3). These reductions have been attributed to various causes: the introduction and implementation of pollution abatement strategies in EU member states, the effect of the current economic crisis on emissions of PM2.5 and the influence of anomalous meteorology observed during the winters of 2009 and 2010. The North Atlantic Oscillation (NAO), a large scale meteorological phenomenon most prevalent during winter, was observed to influence the frequency of Saharan dust intrusions across the Iberian Peninsula. Chemical composition of PM2.5 at MSY is characterised by high levels of organic matter (OM) and sulphate, followed by crustal material, nitrate and ammonia. Sea Spray and

  13. Reducing Uncertainty in the Distribution of Hydrogeologic Units within Volcanic Composite Units of Pahute Mesa Using High-Resolution 3-D Resistivity Methods, Nevada Test Site, Nevada

    USGS Publications Warehouse

    Rodriguez, Brian D.; Sweetkind, Don; Burton, Bethany L.

    2010-01-01

    The U.S. Department of Energy (DOE) and the National Nuclear Security Administration (NNSA) at their Nevada Site Office (NSO) are addressing groundwater contamination resulting from historical underground nuclear testing through the Environmental Management program and, in particular, the Underground Test Area (UGTA) project. From 1951 to 1992, 828 underground nuclear tests were conducted at the Nevada Test Site (NTS) northwest of Las Vegas (DOE UGTA, 2003). Most of these tests were conducted hundreds of feet above the groundwater table; however, more than 200 of the tests were near, or within, the water table. This underground testing was limited to specific areas of the NTS including Pahute Mesa, Rainier Mesa/Shoshone Mountain, Frenchman Flat, and Yucca Flat. Volcanic composite units make up much of the area within the Pahute Mesa Corrective Action Unit (CAU) at the NTS, Nevada. The extent of many of these volcanic composite units extends throughout and south of the primary areas of past underground testing at Pahute and Rainier Mesas. As situated, these units likely influence the rate and direction of groundwater flow and radionuclide transport. Currently, these units are poorly resolved in terms of their hydrologic properties introducing large uncertainties into current CAU-scale flow and transport models. In 2007, the U.S. Geological Survey (USGS), in cooperation with DOE and NNSA-NSO acquired three-dimensional (3-D) tensor magnetotelluric data at the NTS in Area 20 of Pahute Mesa CAU. A total of 20 magnetotelluric recording stations were established at about 600-m spacing on a 3-D array and were tied to ER20-6 well and other nearby well control (fig. 1). The purpose of this survey was to determine if closely spaced 3-D resistivity measurements can be used to characterize the distribution of shallow (600- to 1,500-m-depth range) devitrified rhyolite lava-flow aquifers (LFA) and zeolitic tuff confining units (TCU) in areas of limited drill hole control on

  14. Diversity, taxonomic composition, and functional aspects of fungal communities in living, senesced, and fallen leaves at five sites across North America

    PubMed Central

    Arnold, A. Elizabeth

    2016-01-01

    Background Fungal endophytes inhabit symptomless, living tissues of all major plant lineages to form one of earth’s most prevalent groups of symbionts. Many reproduce from senesced and/or decomposing leaves and can produce extracellular leaf-degrading enzymes, blurring the line between symbiotrophy and saprotrophy. To better understand the endophyte–saprotroph continuum we compared fungal communities and functional traits of focal strains isolated from living leaves to those isolated from leaves after senescence and decomposition, with a focus on foliage of woody plants in five biogeographic provinces ranging from tundra to subtropical scrub forest. Methods We cultured fungi from the interior of surface-sterilized leaves that were living at the time of sampling (i.e., endophytes), leaves that were dead and were retained in plant canopies (dead leaf fungi, DLF), and fallen leaves (leaf litter fungi, LLF) from 3–4 species of woody plants in each of five sites in North America. Our sampling encompassed 18 plant species representing two families of Pinophyta and five families of Angiospermae. Diversity and composition of fungal communities within and among leaf life stages, hosts, and sites were compared using ITS-partial LSU rDNA data. We evaluated substrate use and enzyme activity by a subset of fungi isolated only from living tissues vs. fungi isolated only from non-living leaves. Results Across the diverse biomes and plant taxa surveyed here, culturable fungi from living leaves were isolated less frequently and were less diverse than those isolated from non-living leaves. Fungal communities in living leaves also differed detectably in composition from communities in dead leaves and leaf litter within focal sites and host taxa, regardless of differential weighting of rare and abundant fungi. All focal isolates grew on cellulose, lignin, and pectin as sole carbon sources, but none displayed ligninolytic or pectinolytic activity in vitro. Cellulolytic activity

  15. Correlations between Cassini VIMS spectra and RADAR SAR images: Implications for Titan's surface composition and the character of the Huygens Probe Landing Site

    USGS Publications Warehouse

    Soderblom, L.A.; Kirk, R.L.; Lunine, J.I.; Anderson, J.A.; Baines, K.H.; Barnes, J.W.; Barrett, J.M.; Brown, R.H.; Buratti, B.J.; Clark, R.N.; Cruikshank, D.P.; Elachi, C.; Janssen, M.A.; Jaumann, R.; Karkoschka, E.; Le Mouélic, Stéphane; Lopes, R.M.; Lorenz, R.D.; McCord, T.B.; Nicholson, P.D.; Radebaugh, J.; Rizk, B.; Sotin, C.; Stofan, E.R.; Sucharski, T.L.; Tomasko, M.G.; Wall, S.D.

    2007-01-01

    Titan's vast equatorial fields of RADAR-dark longitudinal dunes seen in Cassini RADAR synthetic aperture images correlate with one of two dark surface units discriminated as "brown" and "blue" in Visible and Infrared Mapping Spectrometer (VIMS) color composites of short-wavelength infrared spectral cubes (RGB as 2.0, 1.6, 1.3 ??m). In such composites bluer materials exhibit higher reflectance at 1.3 ??m and lower at 1.6 and 2.0 ??m. The dark brown unit is highly correlated with the RADAR-dark dunes. The dark brown unit shows less evidence of water ice suggesting that the saltating grains of the dunes are largely composed of hydrocarbons and/or nitriles. In general, the bright units also show less evidence of absorption due to water ice and are inferred to consist of deposits of bright fine precipitating tholin aerosol dust. Some set of chemical/mechanical processes may be converting the bright fine-grained aerosol deposits into the dark saltating hydrocarbon and/or nitrile grains. Alternatively the dark dune materials may be derived from a different type of air aerosol photochemical product than are the bright materials. In our model, both the bright aerosol and dark hydrocarbon dune deposits mantle the VIMS dark blue water ice-rich substrate. We postulate that the bright mantles are effectively invisible (transparent) in RADAR synthetic aperture radar (SAR) images leading to lack of correlation in the RADAR images with optically bright mantling units. RADAR images mostly show only dark dunes and the water ice substrate that varies in roughness, fracturing, and porosity. If the rate of deposition of bright aerosol is 0.001-0.01 ??m/yr, the surface would be coated (to optical instruments) in hundreds-to-thousands of years unless cleansing processes are active. The dark dunes must be mobile on this very short timescale to prevent the accumulation of bright coatings. Huygens landed in a region of the VIMS bright and dark blue materials and about 30 km south of the

  16. Correlations between Cassini VIMS spectra and RADAR SAR images: Implications for Titan's surface composition and the character of the Huygens Probe Landing Site

    NASA Astrophysics Data System (ADS)

    Soderblom, Laurence A.; Kirk, Randolph L.; Lunine, Jonathan I.; Anderson, Jeffrey A.; Baines, Kevin H.; Barnes, Jason W.; Barrett, Janet M.; Brown, Robert H.; Buratti, Bonnie J.; Clark, Roger N.; Cruikshank, Dale P.; Elachi, Charles; Janssen, Michael A.; Jaumann, Ralf; Karkoschka, Erich; Mouélic, Stéphane Le; Lopes, Rosaly M.; Lorenz, Ralph D.; McCord, Thomas B.; Nicholson, Philip D.; Radebaugh, Jani; Rizk, Bashar; Sotin, Christophe; Stofan, Ellen R.; Sucharski, Tracie L.; Tomasko, Martin G.; Wall, Stephen D.

    2007-11-01

    Titan's vast equatorial fields of RADAR-dark longitudinal dunes seen in Cassini RADAR synthetic aperture images correlate with one of two dark surface units discriminated as "brown" and "blue" in Visible and Infrared Mapping Spectrometer (VIMS) color composites of short-wavelength infrared spectral cubes (RGB as 2.0, 1.6, 1.3 μm). In such composites bluer materials exhibit higher reflectance at 1.3 μm and lower at 1.6 and 2.0 μm. The dark brown unit is highly correlated with the RADAR-dark dunes. The dark brown unit shows less evidence of water ice suggesting that the saltating grains of the dunes are largely composed of hydrocarbons and/or nitriles. In general, the bright units also show less evidence of absorption due to water ice and are inferred to consist of deposits of bright fine precipitating tholin aerosol dust. Some set of chemical/mechanical processes may be converting the bright fine-grained aerosol deposits into the dark saltating hydrocarbon and/or nitrile grains. Alternatively the dark dune materials may be derived from a different type of air aerosol photochemical product than are the bright materials. In our model, both the bright aerosol and dark hydrocarbon dune deposits mantle the VIMS dark blue water ice-rich substrate. We postulate that the bright mantles are effectively invisible (transparent) in RADAR synthetic aperture radar (SAR) images leading to lack of correlation in the RADAR images with optically bright mantling units. RADAR images mostly show only dark dunes and the water ice substrate that varies in roughness, fracturing, and porosity. If the rate of deposition of bright aerosol is 0.001-0.01 μm/yr, the surface would be coated (to optical instruments) in hundreds-to-thousands of years unless cleansing processes are active. The dark dunes must be mobile on this very short timescale to prevent the accumulation of bright coatings. Huygens landed in a region of the VIMS bright and dark blue materials and about 30 km south of the

  17. Site-specific functionalization for chemical speciation of Cr(III) and Cr(VI) using polyaniline impregnated nanocellulose composite: equilibrium, kinetic, and thermodynamic modeling

    NASA Astrophysics Data System (ADS)

    Jain, Priyanka; Varshney, Shilpa; Srivastava, Shalini

    2015-10-01

    Site-specific functionalizations are the emergent attention for the enhancement of sorption latent of heavy metals. Limited chemistry has been applied for the fabrication of diafunctionalized materials having potential to tether both environmentally stable oxidation states of chromium (Cr(III) and Cr(VI). Polyaniline impregnated nanocellulose composite (PANI-NCC) has been fabricated using click chemistry and explored for the removal of Cr(III) and Cr(VI) from hydrological environment. The structure, stability, morphology, particle size, surface area, hydrophilicity, and porosity of fabricated PANI-NCC were characterized comprehensively using analytical techniques and mathematical tools. The maximum sorption performance of PANI-NCC was procured for (Cr(III): 47.06 mg g-1; 94.12 %) and (Cr(VI): 48.92 mg g-1; 97.84 %) by equilibrating 0.5 g sorbent dose with 1000 mL of 25 mg L-1 chromium conc. at pH 6.5 and 2.5 for Cr(III) and Cr(VI), respectively. The sorption data showed a best fit to the Langmuir isotherm and pseudo-second-order kinetic model. The negative value of ∆ G° (-8.59 and -11.16 kJ mol-1) and ∆ H° (66.46 × 10-1 and 17.84 × 10-1 kJ mol-1), and positive value of ∆ S° (26.66 and 31.46 J mol-1K-1) for Cr(III) and Cr(VI), respectively, reflect the spontaneous, feasibility, and exothermic nature of the sorption process. The application of fabricated PANI-NCC for removing both the forms of chromium in the presence of other heavy metals was also tested at laboratory and industrial waste water regime. These findings open up new avenues in the row of high performance, scalable, and economic nanobiomaterial for the remediation of both forms of chromium from water streams.

  18. Neuregulin1 signaling targets SRF and CREB and activates the muscle spindle-specific gene Egr3 through a composite SRF-CREB-binding site.

    PubMed

    Herndon, Carter A; Ankenbruck, Nick; Lester, Bridget; Bailey, Julie; Fromm, Larry

    2013-03-10

    Muscle spindles are sensory receptors embedded within muscle that detect changes in muscle length. Each spindle is composed of specialized muscle fibers, known as intrafusal muscle fibers, along with the endings of axons from sensory neurons that innervate these muscle fibers. Formation of muscle spindles requires neuregulin1 (NRG1), which is released by sensory axons, activating ErbB receptors in muscle cells that are contacted. In muscle cells, the transcription factor Egr3 is transcriptionally induced by NRG1, which in turn activates various target genes involved in forming the intrafusal fibers of muscle spindles. The signaling relay within the NRG1-ErbB pathway that acts to induce Egr3 is presumably critical for muscle spindle formation but for the most part has not been determined. In the current studies, we examined, using cultured muscle cells, transcriptional regulatory mechanisms by which Egr3 responds to NRG1. We identified a composite regulatory element for the Egr3 gene, consisting adjacent sites that bind cAMP response element binding protein (CREB) and serum response factor (SRF), with a role in NRG1 responsiveness. The SRF element also influences Egr3 basal expression in unstimulated myotubes, and in the absence of the SRF element, the CREB element influences basal expression. We show that NRG1 signaling, to target SRF, acts on the SRF coactivators myocardian-related transcription factor (MRTF)-A and MRTF-B, which are known to activate SRF-mediated transcription, by stimulating their translocation from the cytoplasm to the nucleus. CREB is phosphorylated, which is known to contribute to its activation, in response to NRG1. These results suggest that NRG1 induces expression of the muscle spindle-specific gene Egr3 by stimulating the transcriptional activity of CREB and SRF.

  19. Size and elemental composition of dry-deposited particles during a severe dust storm at a coastal site of Eastern China.

    PubMed

    Niu, Hongya; Zhang, Daizhou; Hu, Wei; Shi, Jinhui; Li, Ruipeng; Gao, Huiwang; Pian, Wei; Hu, Min

    2016-02-01

    Dry-deposited particles were collected during the passage of an extremely strong dust storm in March, 2010 at a coastal site in Qingdao (36.15 °N, 120.49 °E), a city located in Eastern China. The size, morphology, and elemental composition of the particles were quantified with a scanning electron microscope equipped with an energy dispersive X-ray instrument (SEM-EDX). The particles appeared in various shapes, and their size mainly varied from 0.4 to 10 μm, with the mean diameters of 0.5, 1.5, and 1.0 μm before, during, and after the dust storm, respectively. The critical size of the mineral particles settling on the surface in the current case was about 0.3-0.4 μm before the dust storm and about 0.5-0.7 μm during the dust storm. Particles that appeared in high concentration but were smaller than the critical size deposited onto the surface at a small number flux. The elements Al, Si and Mg were frequently detected in all samples, indicating the dominance of mineral particles. The frequency of Al in particles collected before the dust storm was significantly lower than for those collected during and after the dust storm. The frequencies of Cl and Fe did not show obvious changes, while those of S, K and Ca decreased after the dust arrival. These results indicate that the dust particles deposited onto the surface were less influenced by anthropogenic pollutants in terms of particle number.

  20. Influence of harvesting site on chemical composition and potential protein value of Acacia erioloba, A. nilotica and Ziziphus mucronata leaves for ruminants.

    PubMed

    Mnisi, C M; Mlambo, V

    2016-07-21

    This study was designed to evaluate the chemical composition, buffer N solubility, in vitro ruminal N degradation and in vitro ruminal biological activity of condensed tannins in Acacia erioloba, Acacia nilotica and Ziziphus mucronata leaves harvested from two sites (Masuthle communal grazing land and Molelwane private farm). Leaves were harvested, dried at 60 °C and milled. The highest crude protein (CP) content was found in leaves of Z. mucronata (177.7 g/kg DM). Leaves harvested from Masuthle had higher (p < 0.05) soluble phenolics (SPh) (44.6 g TAE/kg DM) compared to those harvested from Molelwane (29.8 g TAE/kg DM). In both Molelwane and Masuthle, leaves of A. nilotica had higher levels of condensed tannins (CT) (0.76 AU550/200 mg and 0.52 AU550/200 mg respectively) followed by A. erioloba and Z. mucronata, which did not differ (p > 0.05). Nitrogen degradability at 24 h was the same (p > 0.05) for all tree species but not at 12 and 36 h. No linear association (p > 0.05) was found between buffer-soluble N and in vitro ruminal N degradability in leaves with high SPh content. The largest polyethylene glycol (PEG) effect was in leaves of A. nilotica (448%) harvested from Masuthle after 36 h of incubation. Ziziphus mucronata leaves harvested from Molelwane had the least PEG effect at 48 h. There was no linear association (p > 0.05) between PEG effect and SPh for all incubation periods, but a positive relationship was observed between PEG effect and condensed tannins content. There was no linear association between solubility index (SI) and in vitro ruminal N degradability for tannin-rich leaves. It was concluded that higher browsing pressure in Masuthle communal rangeland resulted in leaves with higher levels of condensed tannins, which had higher in vitro ruminal biological activity, compared to those harvested from Molelwane.

  1. Maize Mu transposons are targeted to the 5' untranslated region of the gl8 gene and sequences flanking Mu target-site duplications exhibit nonrandom nucleotide composition throughout the genome.

    PubMed Central

    Dietrich, Charles R; Cui, Feng; Packila, Mark L; Li, Jin; Ashlock, Daniel A; Nikolau, Basil J; Schnable, Patrick S

    2002-01-01

    The widespread use of the maize Mutator (Mu) system to generate mutants exploits the preference of Mu transposons to insert into genic regions. However, little is known about the specificity of Mu insertions within genes. Analysis of 79 independently isolated Mu-induced alleles at the gl8 locus established that at least 75 contain Mu insertions. Analysis of the terminal inverted repeats (TIRs) of the inserted transposons defined three new Mu transposons: Mu10, Mu 11, and Mu12. A large percentage (>80%) of the insertions are located in the 5' untranslated region (UTR) of the gl8 gene. Ten positions within the 5' UTR experienced multiple independent Mu insertions. Analyses of the nucleotide composition of the 9-bp TSD and the sequences directly flanking the TSD reveals that the nucleotide composition of Mu insertion sites differs dramatically from that of random DNA. In particular, the frequencies at which C's and G's are observed at positions -2 and +2 (relative to the TSD) are substantially higher than expected. Insertion sites of 315 RescueMu insertions displayed the same nonrandom nucleotide composition observed for the gl8-Mu alleles. Hence, this study provides strong evidence for the involvement of sequences flanking the TSD in Mu insertion-site selection. PMID:11861572

  2. Influence of the X-site composition on tourmaline's crystal structure: investigation of synthetic K-dravite, dravite, oxy-uvite, and magnesio-foitite using SREF and Raman spectroscopy

    NASA Astrophysics Data System (ADS)

    Berryman, E. J.; Wunder, B.; Ertl, A.; Koch-Müller, M.; Rhede, D.; Scheidl, K.; Giester, G.; Heinrich, W.

    2016-02-01

    The crystal structures of synthetic K-dravite [XKYMg 3 Z Al 6 T Si6O18(BO3) 3 V (OH) 3 W (OH)], dravite [XNaYMg 3 Z Al 6 T Si6O18(BO3) 3 V (OH) 3 W (OH)], oxy-uvite [XCaYMg 3 Z Al 6 T Si6O18(BO3) 3 V (OH) 3 W O], and magnesio-foitite [X☐Y(Mg2Al)ZAl 6 T Si6O18(BO3) 3 V (OH) 3 W (OH)] are investigated by polarized Raman spectroscopy, single-crystal structure refinement (SREF), and powder X-ray diffraction. The use of compositionally simple tourmalines characterized by electron microprobe analysis facilitates the determination of site occupancy in the SREF and band assignment in the Raman spectra. The synthesized K-dravite, oxy-uvite, and magnesio-foitite have significant Mg-Al disorder between their octahedral sites indicated by their respective average < Y-O> and < Z-O> bond lengths. The Y- and Z-site compositions of oxy-uvite (YMg1.52Al1.48(10) and ZAl4.90Mg1.10(15)) and magnesio-foitite (YAl1.62Mg1.38(18) and ZAl4.92Mg1.08(24)) are refined from the electron densities at each site. The Mg-Al ratio of the Y and Z sites is also determined from the relative integrated peak intensities of the Raman bands in the O-H stretching vibrational range (3250-3850 cm-1), producing values in good agreement with the SREF data. The unit cell volume of tourmaline increases from magnesio-foitite (1558.4(3) Å3) to dravite (1569.5(4)-1571.7(3) Å3) to oxy-uvite (1572.4(2) Å3) to K-dravite (1588.1(2) Å3), mainly due to lengthening of the crystallographic c-axis. The increase in the size of the X-site coordination polyhedron from dravite (Na) to K-dravite (K) is accommodated locally in the crystal structure, resulting in the shortening of the neighboring O1- H1 bond. In oxy-uvite, Ca2+ is locally associated with a deprotonated W (O1) site, whereas vacant X sites are neighbored by protonated W ( O1) sites. Increasing the size of the X-site-occupying ion does not detectably affect bonding between the other sites; however, the higher charge of Ca and the deprotonated W ( O1) site in

  3. Influence of Human Activity Patterns, particle composition, and residential air exchange rates on modeled distributions of PM 2.5 exposure compared with central-site monitoring data

    EPA Science Inventory

    Central-site monitors do not account for factors such as outdoor-to-indoor transport and human activity patterns that influence personal exposures to ambient fine-particulate matter (PM2.5). We describe and compare different ambient PM2.5 exposure estimation...

  4. Complexes containing activating transcription factor (ATF)/cAMP-responsive-element-binding protein (CREB) interact with the CCAAT/enhancer-binding protein (C/EBP)-ATF composite site to regulate Gadd153 expression during the stress response.

    PubMed Central

    Fawcett, T W; Martindale, J L; Guyton, K Z; Hai, T; Holbrook, N J

    1999-01-01

    Gadd153, also known as chop, encodes a member of the CCAAT/enhancer-binding protein (C/EBP) transcription factor family and is transcriptionally activated by cellular stress signals. We recently demonstrated that arsenite treatment of rat pheochromocytoma PC12 cells results in the biphasic induction of Gadd153 mRNA expression, controlled in part through binding of C/EBPbeta and two uncharacterized protein complexes to the C/EBP-ATF (activating transcription factor) composite site in the Gadd153 promoter. In this report, we identified components of these additional complexes as two ATF/CREB (cAMP-responsive-element-binding protein) transcription factors having differential binding activities dependent upon the time of arsenite exposure. During arsenite treatment of PC12 cells, we observed enhanced binding of ATF4 to the C/EBP-ATF site at 2 h as Gadd153 mRNA levels increased, and enhanced binding of ATF3 complexes at 6 h as Gadd153 expression declined. We further demonstrated that ATF4 activates, while ATF3 represses, Gadd153 promoter activity through the C/EBP-ATF site. ATF3 also repressed ATF4-mediated transactivation and arsenite-induced activation of the Gadd153 promoter. Our results suggest that numerous members of the ATF/CREB family are involved in the cellular stress response, and that regulation of stress-induced biphasic Gadd153 expression in PC12 cells involves the ordered, sequential binding of multiple transcription factor complexes to the C/EBP-ATF composite site. PMID:10085237

  5. Chemical composition of size-resolved particulate matter at near-freeway and urban background sites in the greater Beirut area

    NASA Astrophysics Data System (ADS)

    Daher, Nancy; Saliba, Najat A.; Shihadeh, Alan L.; Jaafar, Malek; Baalbaki, Rima; Sioutas, Constantinos

    2013-12-01

    To characterize road-traffic emissions in the greater Beirut area, size-resolved PM10-2.5, PM2.5-0.25 and PM0.25 samples were concurrently collected at near-freeway and background sites. While particle mass levels were 1.3-2.6 times greater at the roadside than background location, PM10-2.5 and PM0.25 prevailed at both sites (36-43% of PM10). A chemical mass closure showed that PM10-2.5 was mostly composed of crustal material, contributing to 12-23% of its mass across sites. On the other hand, in PM2.5-0.25 and PM0.25, organic matter (46-56%) was dominant at the roadside location, while secondary ions (SI, 54-68%) were more abundant at the background site. In the vicinity of the freeway, organic carbon (OC) levels varied from 4 μg m-3 in PM10-2.5 to 10.1 μg m-3 in PM0.25, exceeding those at the background site by 4-7 times. In contrast, OC was largely water-soluble at the background location, with its water-soluble fraction displaying comparable PM2.5-0.25- and PM0.25-concentrations at both sites, corroborating its regional secondary origin. PM0.25-elemental carbon (EC), which dominated overall EC mass, was 7-fold greater at the near-freeway than background location, indicating a contribution from diesel or also smoking vehicles to road-traffic emissions. PM2.5-SI showed fairly uniform concentrations across sites, confirming their mainly regional source. Polycyclic aromatic hydrocarbons (PAHs) were undetected at the coastal background site, whereas their levels peaked at 11.5 ng m-3 in proximity to the freeway, with the majority confined to PM0.25. Compared to other roadways, organic compounds at the freeway location exhibited high hopanes plus steranes-to-total carbon ratios (0.16-1.1 ng μg-1), indicative of different engine configurations, fleet or also lubricating oil formulation. At both locations, PM0.25-bound n-alkanes (C19-C34) showed a predominance of high molecular weight homologues and no carbon number preference, suggesting their likely road dust

  6. Nucleotide sequence composition adjacent to intronic splice sites improves splicing efficiency via its effect on pre-mRNA local folding in fungi.

    PubMed

    Zafrir, Zohar; Tuller, Tamir

    2015-10-01

    RNA splicing is the central process of intron removal in eukaryotes known to regulate various cellular functions such as growth, development, and response to external signals. The canonical sequences indicating the splicing sites needed for intronic boundary recognition are well known. However, the roles and evolution of the local folding of intronic and exonic sequence features adjacent to splice sites has yet to be thoroughly studied. Here, focusing on four fungi (Saccharomyces cerevisiae, Schizosaccharomyces pombe, Aspergillus nidulans, and Candida albicans), we performed for the first time a comprehensive high-resolution study aimed at characterizing the encoding of intronic splicing efficiency in pre-mRNA transcripts and its effect on intron evolution. Our analysis supports the conjecture that pre-mRNA local folding strength at intronic boundaries is under selective pressure, as it significantly affects splicing efficiency. Specifically, we show that in the immediate region of 12-30 nucleotides (nt) surrounding the intronic donor site there is a preference for weak pre-mRNA folding; similarly, in the region of 15-33 nt surrounding the acceptor and branch sites there is a preference for weak pre-mRNA folding. We also show that in most cases there is a preference for strong pre-mRNA folding further away from intronic splice sites. In addition, we demonstrate that these signals are not associated with gene-specific functions, and they correlate with splicing efficiency measurements (r = 0.77, P = 2.98 × 10(-21)) and with expression levels of the corresponding genes (P = 1.24 × 10(-19)). We suggest that pre-mRNA folding strength in the above-mentioned regions has a direct effect on splicing efficiency by improving the recognition of intronic boundaries. These new discoveries are contributory steps toward a broader understanding of splicing regulation and intronic/transcript evolution.

  7. Subcutaneous fat patterning in athletes: selection of appropriate sites and standardisation of a novel ultrasound measurement technique: ad hoc working group on body composition, health and performance, under the auspices of the IOC Medical Commission

    PubMed Central

    Müller, Wolfram; Lohman, Timothy G; Stewart, Arthur D; Maughan, Ronald J; Meyer, Nanna L; Sardinha, Luis B; Kirihennedige, Nuwanee; Reguant-Closa, Alba; Risoul-Salas, Vanessa; Sundgot-Borgen, Jorunn; Ahammer, Helmut; Anderhuber, Friedrich; Fürhapter-Rieger, Alfred; Kainz, Philipp; Materna, Wilfried; Pilsl, Ulrike; Pirstinger, Wolfram; Ackland, Timothy R

    2016-01-01

    Background Precise and accurate field methods for body composition analyses in athletes are needed urgently. Aim Standardisation of a novel ultrasound (US) technique for accurate and reliable measurement of subcutaneous adipose tissue (SAT). Methods Three observers captured US images of uncompressed SAT in 12 athletes and applied a semiautomatic evaluation algorithm for multiple SAT measurements. Results Eight new sites are recommended: upper abdomen, lower abdomen, erector spinae, distal triceps, brachioradialis, lateral thigh, front thigh, medial calf. Obtainable accuracy was 0.2 mm (18 MHz probe; speed of sound: 1450 m/s). Reliability of SAT thickness sums (N=36): R2=0.998, SEE=0.55 mm, ICC (95% CI) 0.998 (0.994 to 0.999); observer differences from their mean: 95% of the SAT thickness sums were within ±1 mm (sums of SAT thicknesses ranged from 10 to 50 mm). Embedded fibrous tissues were also measured. Conclusions A minimum of eight sites is suggested to accommodate inter-individual differences in SAT patterning. All sites overlie muscle with a clearly visible fascia, which eases the acquisition of clear images and the marking of these sites takes only a few minutes. This US method reaches the fundamental accuracy and precision limits for SAT measurements given by tissue plasticity and furrowed borders, provided the measurers are trained appropriately. PMID:26702017

  8. Polychlorinated biphenyls in human hair at an e-waste site in China: composition profiles and chiral signatures in comparison to dust.

    PubMed

    Zheng, Jing; Yan, Xiao; Chen, She-Jun; Peng, Xiao-Wu; Hu, Guo-Cheng; Chen, Ke-Hui; Luo, Xiao-Jun; Mai, Bi-Xian; Yang, Zhong-Yi

    2013-04-01

    We analyzed the polychlorinated biphenyls (PCBs) in human hair collected from an electronic waste (e-waste) recycling area in southern China and compared their composition profiles and chiral signatures to those of workplace and domestic dust. The PCB concentrations showed significant age dependence in dismantling workers' hair but not in residents' hair. Among residents, PCB concentrations decreased in the following order: elderly people>students>pre-school children>adults. The PCB homologue and congener profiles of the workers' hair were similar to those of the workplace dust. However, the PCB homologue profile of the residents' hair was clearly different from that of the domestic dust. The chiral congener CB95 generally exhibited a racemic or near-racemic composition in both hair and dust, with enantiomer fractions (EFs) ranging from 0.485 to 0.525 in hair and from 0.479 to 0.504 in dust. The EFs of CB132 in dust (0.477-0.513) were closer to a racemic chiral signature than those in hair (0.378-0.521), but this difference was not significant. Our results suggest that the chiral signature of PCBs may be a better tool than the PCB composition profile for identifying the external and internal sources of organic contaminants in human hair. Further measurements of chiral PCB signatures in hair and blood from the same individuals are needed to identify the external and internal sources of PCBs in human hair.

  9. Flame retardants and organochlorines in indoor dust from several e-waste recycling sites in South China: composition variations and implications for human exposure.

    PubMed

    Zheng, Xiaobo; Xu, Fuchao; Chen, Kehui; Zeng, Yanhong; Luo, Xiaojun; Chen, Shejun; Mai, Bixian; Covaci, Adrian

    2015-05-01

    Several classes of flame retardants, such as polybrominated diphenyl ethers (PBDEs), novel brominated flame retardants (NBFRs), dechlorane plus (DPs), and organophosphate flame retardants (PFRs), together with polychlorinated biphenyls (PCBs) were measured in indoor dust from five villages located in three e-waste recycling regions in Guangdong Province, South China. The medians of PBDEs, NBFRs, and PFRs in dust in five sites ranged from 685-67,500, 1460-50,010, and 2180-29,000ng/g, respectively. These concentrations were much higher than the medians of PCBs (52-2900ng/g). BDE 209 and decabromodiphenyl ethane (DBDPE) were the two major halogen flame retardants in dust, while tris-(1-chloro-2-propyl) phosphate (TCIPP) and triphenyl phosphate (TPHP) were the major PFRs. Principle component analysis revealed the different pollutant patterns among different sites. The estimated median human exposures of PBDEs, NBFRs, PFRs, and PCBs via dust ingestion were 1.1-24.1, 0.73-20.3, 1.36-23.5, and 0.04-0.93ng/kgbw/day for adults, and 16.2-352, 10.7-296, 19.9-343, 0.05-0.61, 0.65-13.6ng/kgbw/day for toddlers, respectively. Residents from Site 5 had the highest exposure (95 percentile levels and high dust ingestion for toddlers) of PBDEs (3920ng/kgbw/day), NBFRs (3200ng/kgbw/day), and PFRs (5280ng/kgbw/day). More attention should be paid to the contamination with NBFRs and PFRs, instead of PCBs, in these e-waste recycling regions, and local public health threat from PBDE alternatives should remain of concern. To the best of our knowledge, this is the first study on human exposure assessment of PFRs at e-waste sites.

  10. NMR studies demonstrate a unique AAB composition and chain register for a heterotrimeric type IV collagen model peptide containing a natural interruption site.

    PubMed

    Xiao, Jianxi; Sun, Xiuxia; Madhan, Balaraman; Brodsky, Barbara; Baum, Jean

    2015-10-02

    All non-fibrillar collagens contain interruptions in the (Gly-X-Y)n repeating sequence, such as the more than 20 interruptions found in chains of basement membrane type IV collagen. Two selectively doubly labeled peptides are designed to model a site in type IV collagen with a GVG interruption in the α1(IV) and a corresponding GISLK sequence within the α2(IV) chain. CD and NMR studies on a 2:1 mixture of these two peptides support the formation of a single-component heterotrimer that maintains the one-residue staggering in the triple-helix, has a unique chain register, and contains hydrogen bonds at the interruption site. Formation of hydrogen bonds at interruption sites may provide a driving force for self-assembly and chain register in type IV and other non-fibrillar collagens. This study illustrates the potential role of interruptions in the structure, dynamics, and folding of natural collagen heterotrimers and forms a basis for understanding their biological role.

  11. N-Glycoprofiling Analysis for Carbohydrate Composition and Site-Occupancy Determination in a Poly-Glycosylated Protein: Human Thyrotropin of Different Origins

    PubMed Central

    Ribela, Maria Teresa C. P.; Damiani, Renata; Silva, Felipe D.; Lima, Eliana R.; Oliveira, João E.; Peroni, Cibele N.; Torjesen, Peter A.; Soares, Carlos R.; Bartolini, Paolo

    2017-01-01

    Human thyrotropin (hTSH) is a glycoprotein with three potential glycosylation sites: two in the α-subunit and one in the β-subunit. These sites are not always occupied and occupancy is frequently neglected in glycoprotein characterization, even though it is related to folding, trafficking, initiation of inflammation and host defense, as well as congenital disorders of glycosylation (CDG). For the first time N-glycoprofiling analysis was applied to the site-occupancy determination of two native pituitary hTSH, in comparison with three recombinant preparations of hTSH, a widely used biopharmaceutical. A single methodology provided the: (i) average N-glycan mass; (ii) mass fraction of each monosaccharide and of sulfate; and (iii) percent carbohydrate. The results indicate that the occupancy (65%–87%) and carbohydrate mass (12%–19%) can be up to 34%–57% higher in recombinant hormones. The average glycan mass is 24% lower in pituitary hTSH and contains ~3-fold fewer moles of galactose (p < 0.005) and sialic acid (p < 0.01). One of the two native preparations, which had the smallest glycan mass together with the lowest occupancy and GalNAc, sulfate, Gal and sialic acid contents, also presented the lowest in vivo bioactivity and circulatory half-life. The methodology described, comparing a recombinant biopharmaceutical to its native equivalent, can be applied to any physiologically or clinical relevant glycoprotein. PMID:28165356

  12. N-Glycoprofiling Analysis for Carbohydrate Composition and Site-Occupancy Determination in a Poly-Glycosylated Protein: Human Thyrotropin of Different Origins.

    PubMed

    Ribela, Maria Teresa C P; Damiani, Renata; Silva, Felipe D; Lima, Eliana R; Oliveira, João E; Peroni, Cibele N; Torjesen, Peter A; Soares, Carlos R; Bartolini, Paolo

    2017-02-03

    Human thyrotropin (hTSH) is a glycoprotein with three potential glycosylation sites: two in the α-subunit and one in the β-subunit. These sites are not always occupied and occupancy is frequently neglected in glycoprotein characterization, even though it is related to folding, trafficking, initiation of inflammation and host defense, as well as congenital disorders of glycosylation (CDG). For the first time N-glycoprofiling analysis was applied to the site-occupancy determination of two native pituitary hTSH, in comparison with three recombinant preparations of hTSH, a widely used biopharmaceutical. A single methodology provided the: (i) average N-glycan mass; (ii) mass fraction of each monosaccharide and of sulfate; and (iii) percent carbohydrate. The results indicate that the occupancy (65%-87%) and carbohydrate mass (12%-19%) can be up to 34%-57% higher in recombinant hormones. The average glycan mass is 24% lower in pituitary hTSH and contains ~3-fold fewer moles of galactose (p < 0.005) and sialic acid (p < 0.01). One of the two native preparations, which had the smallest glycan mass together with the lowest occupancy and GalNAc, sulfate, Gal and sialic acid contents, also presented the lowest in vivo bioactivity and circulatory half-life. The methodology described, comparing a recombinant biopharmaceutical to its native equivalent, can be applied to any physiologically or clinical relevant glycoprotein.

  13. Origin and transport of pore fluids in the Nankai accretionary prism inferred from chemical and isotopic compositions of pore water at cold seep sites off Kumano

    NASA Astrophysics Data System (ADS)

    Toki, Tomohiro; Higa, Ryosaku; Ijiri, Akira; Tsunogai, Urumu; Ashi, Juichiro

    2014-12-01

    We used push corers during manned submersible dives to obtain sediment samples of up to 30 cm from the subseafloor at the Oomine Ridge. The concentrations of B in pore water extracted from the sediment samples from cold seep sites were higher than could be explained by organic matter decomposition, suggesting that the seepage fluid at the site was influenced by B derived from smectite-illite alteration, which occurs between 50°C and 160°C. Although the negative δ18OH2O and δDH2O values of the pore fluids cannot be explained by freshwater derived from clay mineral dehydration (CMD), we considered the contribution of pore fluids in the shallow sediments of the accretionary prism, which showed negative δ18OH2O and δDH2O values according to the results obtained during Integrated Ocean Drilling Program (IODP) Expeditions 315 and 316. We calculated the mixing ratios based on a four-end-member mixing model including freshwater derived from CMD, pore fluids in the shallow (SPF) accretionary prism sediment, seawater (SW), and freshwater derived from methane hydrate (MH) dissociation. However, the Oomine seep fluids were unable to be explained without four end members, suggesting that deep-sourced fluids in the accretionary prism influenced the seeping fluids from this area. This finding presents the first evidence of deep-sourced fluids at cold seep sites in the Oomine Ridge, indicating that a megasplay fault is a potential pathway for the deep-sourced fluids.

  14. Composition of pore water in lake sediments, research site "B", Osage County, Oklahoma: Implications for lake water quality and benthic organisms

    USGS Publications Warehouse

    Zielinski, R.A.; Herkelrath, W.N.; Otton, J.K.

    2007-01-01

    Shallow ground water at US Geological Survey research site B in northeastern Oklahoma is contaminated with NaCl-rich brine from past and present oil production operations. Contaminated ground water provides a potential source of salts, metals, and hydrocarbons to sediment and water of adjacent Skiatook Lake. A former brine storage pit 10 m in diameter that is now submerged just offshore from site B provides an additional source of contamination. Cores of the upper 16-40 cm of lake sediment were taken at the submerged brine pit, near an offshore saline seep, and at a location containing relatively uncontaminated lake sediment. Pore waters from each 2-cm interval were separated by centrifugation and analyzed for dissolved anions, cations, and trace elements. High concentrations of dissolved Cl- in pore waters (200-5000 mg/L) provide the most direct evidence of contamination, and contrast sharply with an average value of only about 37 mg/L in Skiatook Lake. Chloride/Br- mass ratios of 220-240 in contaminated pore waters are comparable to values in contaminated well waters collected onshore. Dissolved concentrations of Se, Pb, Cu and Ni in Cl--rich pore waters exceed current US Environmental Protection Agency criteria for probable toxicity to aquatic life. At the submerged brine storage pit, the increase of Cl- concentration with depth is consistent with diffusion-dominant transport from deeper contaminated sediments. Near the offshore saline seep, pore water Cl- concentrations are consistently high and vary irregularly with depth, indicating probable Cl- transport by layer-directed advective flow. Estimated annual contributions of Cl- to the lake from the brine storage pit (???20 kg) and the offshore seep (???9 kg) can be applied to any number of similar sources. Generous estimates of the number of such sources at site B indicate minimal impact on water quality in the local inlet of Skiatook Lake. Similar methodologies can be applied at other sites of Na

  15. Using radial basis function on the general form of Chou's pseudo amino acid composition and PSSM to predict subcellular locations of proteins with both single and multiple sites.

    PubMed

    Huang, Chao; Yuan, Jingqi

    2013-07-01

    Prediction of protein subcellular location is a meaningful task which attracted much attention in recent years. A lot of protein subcellular location predictors which can only deal with the single-location proteins were developed. However, some proteins may belong to two or even more subcellular locations. It is important to develop predictors which will be able to deal with multiplex proteins, because these proteins have extremely useful implication in both basic biological research and drug discovery. Considering the circumstance that the number of methods dealing with multiplex proteins is limited, it is meaningful to explore some new methods which can predict subcellular location of proteins with both single and multiple sites. Different methods of feature extraction and different models of predict algorithms using on different benchmark datasets may receive some general results. In this paper, two different feature extraction methods and two different models of neural networks were performed on three benchmark datasets of different kinds of proteins, i.e. datasets constructed specially for Gram-positive bacterial proteins, plant proteins and virus proteins. These benchmark datasets have different number of location sites. The application result shows that RBF neural network has apparently superiorities against BP neural network on these datasets no matter which type of feature extraction is chosen.

  16. Survey on composition and bioconcentration potential of 12 metallic elements in King Bolete (Boletus edulis) mushroom that emerged at 11 spatially distant sites.

    PubMed

    Falandysz, Jerzy; Frankowska, Aneta; Jarzynska, Grazyna; Dryzałowska, Anna; Kojta, Anna K; Zhang, Dan

    2011-01-01

    This paper provides data on baseline concentrations, interrelationships and bioconcentration potential of 12 metallic elements by King Bolete collected from 11 spatially distant sites across Poland. There are significant differences in concentrations of metals (Al, Ba, Ca, Cd, Cu, Fe, K, Mg, Mn, Na, Sr, Zn) and their bioconcentration potential in King Bolete Boletus edulis at 11 spatially distant sites surveyed across Poland. These have resulted from significant geographical differences in trace metal concentrations in a layer (0-10 cm) of organic and mineral soil underneath to fruiting bodies and possible local bioavailabilities of macro- (Ca, K, Mg, Na) and trace metals (Al, Ba, Cd, Cu, Fe, Mn, Sr, Zn) to King Bolete. The use of highly appreciated wild-grown edible King Bolete mushroom has established a baseline measure of regional minerals status, heavy metals pollution and assessment of intake rates for wild mushroom dish fanciers against which future changes can be compared. Data on Cd, Cu and Zn from this study and from literature search can be useful to set the maximum limit of these metals in King Bolete collected from uncontaminated (background) areas. In this report also reviewed are data on Al, Ba, Ca, Cd, Cu, Fe, K, Mg, Mn, Na, Sr and Zn accumulation in King Bolete.

  17. Evidence for a hypogene paleohydrogeological event at the prospective nuclear waste disposal site Yucca Mountain, Nevada, USA, revealed by the isotope composition of fluid-inclusion water

    NASA Astrophysics Data System (ADS)

    Dublyansky, Yuri V.; Spötl, Christoph

    2010-01-01

    Secondary calcite residing in open cavities in the unsaturated zone of Yucca Mountain has long been interpreted as the result of downward infiltration of meteoric water through open fractures. In order to obtain information on the isotopic composition (δD and δ 18O) of the mineral-forming water we studied fluid inclusions from this calcite. Water was extracted from inclusions by heated crushing and the δD values were measured using a continuous-flow isotope-ratio mass spectrometry method. The δ 18O values were calculated from the δ 18O values of the host calcite assuming isotopic equilibrium at the temperature of formation determined by fluid-inclusion microthermometry. The δD values measured in all samples range between - 110 and - 90‰, similar to Holocene meteoric water. Coupled δ 18O-δD values plot significantly, 2 to 8‰, to the right of the meteoric water line. Among the various processes operating at the topographic surface and/or in the unsaturated zone only two processes, evaporation and water-rock exchange, could alter the isotope composition of percolating water. Our analysis indicates, however, that none of these processes could produce the observed large positive δ 18O-shifts. The latter require isotopic interaction between mineral-forming fluid and host rock at elevated temperature (>100 °C), which is only possible in the deep-seated hydrothermal environment. The stable isotope data are difficult to reconcile with a meteoric origin of the water from which the secondary minerals at Yucca Mountain precipitated; instead they point to the deep-seated provenance of the mineral-forming waters and their introduction into the unsaturated zone from below, i.e. a hypogene origin.

  18. Composition and arsenic-attenuating capacity of biogenic iron (hydr)oxide flocs at the Lava Cap Mine Superfund Site, Nevada County, CA.

    NASA Astrophysics Data System (ADS)

    Foster, A. L.; Ona-Nguema, G.; Tufano, K.; Brown, G. E.

    2008-12-01

    The Lava Cap Mine Site (LCMS) is on the National Priority List due to the elevated human health risk presented by the catastrophic release of several thousand cubic meters of arsenic (As) enriched tailings (average: 500 ppm As ) from the site. These tailings were released into a creek and lake (former tailings retention pond) in a low-density residential area where ground water is the primary source of drinking water. Although oxidation of iron (Fe) sulfides (pyrite and arsenopyrite) from tailings are the main sources of As and Fe, buffering by carbonate minerals prevents formation of acidic waters. Macroscopic accumulations of fluffy Fe (hydr)oxide are observed suspended in the water column or at the sediment-water interface in creeks, ponds, and seeps of the LCMS. Microscopic analysis indicates that the Fe (hydr)oxide is predominantly associated with the sheaths of bacteria identified as members of the genus Leptothrix, which are known to enzymatically oxidize Fe and manganese (Mn) under oligotrophic, near-neutral, sub oxic conditions. Both Fe- encrusted Leptothrix sheaths (which are largely devoid of cells) and free aggolmerations of Fe hydr(oxide) support morphologically distinct Eubacteria whose identity is currently under investigation. Dried biogenic Fe (hydr)oxide averages 4.4 % organic carbon, 20.2 % Fe, and 0.91% As (9100 ppm), making it attractive as a potential natural biosorbent for As and Fe. Water flow rate is a very important control on the amount of As retained in biogenic Fe (hydr)oxide flocs, based on monitoring of a natural passive bioreactor system. In addition, a pond with nearly stagnant water accumulated approximately one order of magnitude more As (dried) than a seep site with faster-running water, even though there was only a 5-fold difference in their median filtered (0.45 micron) arsenic concentrations. Most Probable Number estimates and analysis of PCR amplicons of Eubacterial DNA indicate that populations of Fe-, As-, and sulfate

  19. Negative Coefficients in the GRE Validity Study Service. GRE Research. GRE Board Professional Report No. 89-05P.

    ERIC Educational Resources Information Center

    Longford, Nicholas T.

    Operational procedures for the Graduate Record Examinations Validity Study Service are reviewed, with emphasis on the problem of frequent occurrence of negative coefficients in the fitted within-department regressions obtained by the empirical Bayes method of H. I. Braun and D. Jones (1985). Several alterations of the operational procedures are…

  20. Transport of pollution to a remote coastal site during gap flow from California's interior: impacts on aerosol composition, clouds, and radiative balance

    NASA Astrophysics Data System (ADS)

    Martin, Andrew C.; Cornwell, Gavin C.; Atwood, Samuel A.; Moore, Kathryn A.; Rothfuss, Nicholas E.; Taylor, Hans; DeMott, Paul J.; Kreidenweis, Sonia M.; Petters, Markus D.; Prather, Kimberly A.

    2017-01-01

    During the CalWater 2015 field campaign, ground-level observations of aerosol size, concentration, chemical composition, and cloud activity were made at Bodega Bay, CA, on the remote California coast. A strong anthropogenic influence on air quality, aerosol physicochemical properties, and cloud activity was observed at Bodega Bay during periods with special weather conditions, known as Petaluma Gap flow, in which air from California's interior is transported to the coast. This study applies a diverse set of chemical, cloud microphysical, and meteorological measurements to the Petaluma Gap flow phenomenon for the first time. It is demonstrated that the sudden and often dramatic change in aerosol properties is strongly related to regional meteorology and anthropogenically influenced chemical processes in California's Central Valley. In addition, it is demonstrated that the change in air mass properties from those typical of a remote marine environment to properties of a continental regime has the potential to impact atmospheric radiative balance and cloud formation in ways that must be accounted for in regional climate simulations.

  1. Metal-Organic Framework-Polymer Composite as a Highly Efficient Sorbent for Sulfonamide Adsorption and Desorption: Effect of Coordinatively Unsaturated Metal Site and Topology.

    PubMed

    Shih, Yung-Han; Wang, Kuen-Yun; Singco, Brenda; Lin, Chia-Her; Huang, Hsi-Ya

    2016-11-08

    In this study, we first demonstrated the effect of two types of metal-organic framework-polymer (MOF-polymer) monoliths on in-tube solid-phase microextraction (IT-SPME) of sulfonamides. Sulfonamides were successfully adsorbed onto MIL-101(Cr)-polymer but were difficult to elute due to these sulfonamides could interact via Lewis acid-base interaction with the presence of Cr(III) coordinatively unsaturated metal sites (CUS). Moreover, the cage-type topology of MIL-101(Cr) that could produce multiple pathways thus complicates the desorption of the test analytes from the sorbent. Contrastingly, MIL-53(Al)-polymer provided weaker Al(III) CUS, and its one-dimensional channel pore structure could provide an unhindered pathway for sulfonamides transfer during elution. After optimizing the IT-SPME condition such as MOF content, pH of sample matrix, column length, extraction flow rate, and elution volume, the calculated extraction recovery of sulfonamides in MIL-53(Al)-polymer as analyzed by microemulsion electrokinetic chromatography (MEEKC) were in the range of 40%-90% with relative standard deviations (RSDs) below 5% and a reusability of at least 30 times.

  2. An introduction to the composition of the Multi-Site University Study of Identity and Culture (MUSIC): a collaborative approach to research and mentorship.

    PubMed

    Weisskirch, Robert S; Zamboanga, Byron L; Ravert, Russell D; Whitbourne, Susan Krauss; Park, Irene J K; Lee, Richard M; Schwartz, Seth J

    2013-04-01

    The Multi-Site University Study of Identity and Culture (MUSIC) is the product of a research collaboration among faculty members from 30 colleges and universities from across the United States. Using Katz and Martin's (1997, p. 7) definition, the MUSIC research collaboration is "the working together of researchers to achieve the common goals of producing new scientific knowledge." The collaboration involved more than just coauthorship; it served "as a strategy to insert more energy, optimism, creativity and hope into the work of [researchers]" (Conoley & Conoley, 2010, p. 77). The philosophy underlying the MUSIC collaborative was intended to foster natural collaborations among researchers, to provide opportunities for scholarship and mentorship for early career and established researchers, and to support exploration of identity, cultural, and ethnic/racial research ideas by tapping the expertise and interests of the broad MUSIC network of collaborators. In this issue, five research articles present innovative findings from the MUSIC datasets. There are two themes across the articles. Research is emerging about broadening the constructs and measures of acculturation and ethnic identity and their relation to health risk behaviors and psychosocial and mental health outcomes. The second theme is about the relationship of perceived discrimination on behavioral and mental health outcomes among immigrant populations.

  3. A comparison of the isotopic composition of lead in rainwater, surface vegetation and tree bark at the long-term monitoring site, Glensaugh, Scotland, in 2007.

    PubMed

    Farmer, John G; Eades, Lorna J; Graham, Margaret C; Cloy, Joanna M; Bacon, Jeffrey R

    2010-08-01

    The lead concentrations and isotopic ratios (206Pb/207Pb, 208Pb/206Pb, 208Pb/207Pb) of 31 rainwater (September 2006-December 2007) and 11 surface vegetation (moss, lichen, heather) samples (October 2007) from the rural upland catchment of Glensaugh in northeast Scotland and of nine bark samples (October 2007) from trees, predominantly Scots pine, in or near Glensaugh were determined. The mean 206Pb/207Pb ratios for rainwater in 2006 and 2007 were similar to those previously determined for 2000 to 2003 at Glensaugh, yielding an average mean annual value of 1.151+/-0.005 (+/-1 SD) for the period from 2000, when an outright ban on leaded petrol came into force in the UK, to 2007. The mean 206Pb/207Pb ratio (1.146+/-0.004; n=7) for surface vegetation near the top (430-450 m) of the catchment was not significantly different (Student's t test) from that of rainwater (1.148+/-0.017; n=24) collected over the 12-month period prior to vegetation sampling, but both were significantly different, at the 0.1% (i.e. p<0.001) and 1% (p<0.01) level, respectively, from the corresponding mean value (1.134+/-0.006; n=9) for the outermost layer of tree bark. When considered in conjunction with similar direct evidence for 2002 and indirect evidence (e.g. grass, atmospheric particulates, dated peat) for recent decades in the Glensaugh area, these findings confirm that the lead isotopic composition of surface vegetation, including that of suitably located moss, reflects that of the atmosphere while that of the outermost layer of Scots pine bark is affected by non-contemporaneous lead. The nature and relative extent of the different contributory sources of lead to the current UK atmosphere in the era of unleaded petrol, however, are presently not well characterised on the basis of lead isotopic measurements.

  4. Effects of A-site composition and oxygen nonstoichiometry on the thermodynamic stability of compounds in the Ba–Sr–Co–Fe–O system

    SciTech Connect

    Tanasescu, Speranta; Yáng, Zhèn; Martynczuk, Julia; Varazashvili, Vera; Maxim, Florentina; Teodorescu, Florina; Botea, Alina; Totir, Nicolae; and others

    2013-04-15

    The thermodynamic stability of the perovskite-type oxides in the Ba{sub x}Sr{sub 1−x}Co{sub 0.8}Fe{sub 0.2}O{sub 3−δ} (BSCF) system was investigated with varying Ba:Sr ratios (x=0.2, 0.4, 0.5, 0.6, 0.8) and correlated with the charge compensation mechanism and the change in the oxygen stoichiometry of the materials. Thermodynamic properties represented by the relative partial molar free energies, enthalpies and entropies of oxygen dissolution in the perovskite phase, as well as the equilibrium partial pressures of oxygen have been obtained in the temperature range of 823–1273 K using solid electrolyte electrochemical cells (EMF) method. The influence of the oxygen stoichiometry change on the thermodynamic properties was examined using a coulometric titration technique coupled with EMF measurements. The temperature dependence of enthalpy increment (H{sub T}−H{sub 298}) in the temperature range of 700–900 K was measured by drop calorimetry. The energetic parameters allow for the correlation of the structural and electrical stability with the defect structures. - Graphical abstract: Partial molar energy of oxygen dissolution (ΔG{sup ¯}{sub O{sub 2}}) (EMF measurements) and enthalpy increment (H{sub T}−H{sub 298}) (drop calorimetry data) of perovskite materials with the composition Ba{sub x}Sr{sub 1−x}Co{sub 0.8}Fe{sub 0.2}O{sub 3−δ} as a function of temperature and Barium content. Highlights: ► We report relevant data for thermodynamic stability of Ba{sub x}Sr{sub 1−x}Co{sub 1−y}Fe{sub y}O{sub 3−δ} compounds. ► Temperature of structural transformations is evidenced as a function of Ba content. ► Correlation between thermodynamic, electrical and structural data is investigated. ► The results are discussed based on the properties-defect structure relationship.

  5. Reconstruction of local fallout composition and gamma-ray exposure in a village contaminated by the first USSR nuclear test in the Semipalatinsk nuclear test site in Kazakhstan.

    PubMed

    Imanaka, Tetsuji; Yamamoto, Masayoshi; Kawai, Kenta; Sakaguchi, Aya; Hoshi, Masaharu; Chaizhunusova, Nailya; Apsalikov, Kazbek

    2010-11-01

    After the disintegration of the USSR in end of 1991, it became possible for foreign scientists to visit Kazakhstan, in order to investigate the radiological consequences of nuclear explosions that had been conducted at the Semipalatinsk nuclear test site (SNTS). Since the first visit in 1994, our group has been continuing expeditions for soil sampling at various areas around SNTS. The current level of local fallout at SNTS was studied through γ-spectrometry for (137)Cs as well as α-spectrometry for (239,240)Pu. Average values of soil inventory from wide areas around SNTS were 3,500 and 3,700 Bq m(-2) for (137)Cs and (239,240)Pu, respectively, as of January 1, 2000. The average level of (137)Cs is comparable to that in Japan due to global fallout, while the level of (239,240)Pu is several tens of times larger than that in Japan. Areas of strong contamination were found along the trajectories of radioactive fallout, information on which was declassified after the collapse of the USSR. Our recent efforts of soil sampling were concentrated on the area around the Dolon village heavily affected by the radioactive plume from the first USSR atomic bomb test in 1949 and located 110 km east from ground zero of the explosion. Using soil inventory data, retrospective dosimetry was attempted by reconstructing γ-ray exposure from fission product nuclides deposited on the ground. Adopting representative parameters for the initial (137)Cs deposition (13 kBq m(-2)), the refractory/volatile deposition ratio (3.8) and the plume arrival time after explosion (2.5 h), an absorbed dose in air of 600 mGy was obtained for the 1-year cumulative dose in Dolon village, due to the first bomb test in 1949. Considering possible ranges of the parameters, 350 and 910 mGy were estimated for high and low cases of γ-ray dose in air, respectively. It was encouraging that the deduced value was consistent with other estimations using thermal luminescence and archived monitoring data. The present

  6. Influence of advancing season on dietary composition, intake, site of digestion, and microbial efficiency in beef steers grazing a native range in western North Dakota.

    PubMed

    Cline, H J; Neville, B W; Lardy, G P; Caton, J S

    2009-01-01

    Four ruminally and duodenally cannulated beef steers (388 +/- 12 kg) were used to evaluate effects of advancing season on forage quality, intake, site of digestion, and microbial efficiency while grazing mixed-grass prairie in western North Dakota. Five 11-d sample collections were conducted from late June to mid-November. Chromic oxide (8 g) was dosed twice daily at 0700 and 1900 h via gelatin capsule from d 2 to 11 of each collection period, and duodenal and fecal collections were performed on d 7 to 11. Masticate samples were collected for each sampling period. Dietary N declined linearly (P = 0.01), from 1.95% in June to 1.15% in November, whereas NDF increased linearly (P = 0.01), 72.4% in June to 85.1% in November. Total OM intake (g/kg of BW) decreased linearly (P

  7. Direct GR Binding Sites Potentiate Clusters of TF Binding across the Human Genome.

    PubMed

    Vockley, Christopher M; D'Ippolito, Anthony M; McDowell, Ian C; Majoros, William H; Safi, Alexias; Song, Lingyun; Crawford, Gregory E; Reddy, Timothy E

    2016-08-25

    The glucocorticoid receptor (GR) binds the human genome at >10,000 sites but only regulates the expression of hundreds of genes. To determine the functional effect of each site, we measured the glucocorticoid (GC) responsive activity of nearly all GR binding sites (GBSs) captured using chromatin immunoprecipitation (ChIP) in A549 cells. 13% of GBSs assayed had GC-induced activity. The responsive sites were defined by direct GR binding via a GC response element (GRE) and exclusively increased reporter-gene expression. Meanwhile, most GBSs lacked GC-induced reporter activity. The non-responsive sites had epigenetic features of steady-state enhancers and clustered around direct GBSs. Together, our data support a model in which clusters of GBSs observed with ChIP-seq reflect interactions between direct and tethered GBSs over tens of kilobases. We further show that those interactions can synergistically modulate the activity of direct GBSs and may therefore play a major role in driving gene activation in response to GCs.

  8. Nuclear resonance vibrational spectroscopy reveals the FeS cluster composition and active site vibrational properties of an O2-tolerant NAD+-reducing [NiFe] hydrogenase

    SciTech Connect

    Lauterbach, Lars; Wang, Hongxin; Horch, Marius; Gee, Leland B.; Yoda, Yoshitaka; Tanaka, Yoshihito; Zebger, Ingo; Lenz, Oliver; Cramer, Stephen P.

    2014-10-30

    Hydrogenases are complex metalloenzymes that catalyze the reversible splitting of molecular hydrogen into protons and electrons essentially without overpotential. The NAD+-reducing soluble hydrogenase (SH) from Ralstonia eutropha is capable of H2 conversion even in the presence of usually toxic dioxygen. The molecular details of the underlying reactions are largely unknown, mainly because of limited knowledge of the structure and function of the various metal cofactors present in the enzyme. Here, all iron-containing cofactors of the SH were investigated by 57Fe specific nuclear resonance vibrational spectroscopy (NRVS). Our data provide experimental evidence for one [2Fe2S] center and four [4Fe4S] clusters, which is consistent with the amino acid sequence composition. Only the [2Fe2S] cluster and one of the four [4Fe4S] clusters were reduced upon incubation of the SH with NADH. This finding explains the discrepancy between the large number of FeS clusters and the small amount of FeS cluster-related signals as detected by electron paramagnetic resonance spectroscopic analysis of several NAD+-reducing hydrogenases. For the first time, Fe–CO and Fe–CN modes derived from the [NiFe] active site could be distinguished by NRVS through selective 13C labeling of the CO ligand. This strategy also revealed the molecular coordinates that dominate the individual Fe–CO modes. The present approach explores the complex vibrational signature of the Fe–S clusters and the hydrogenase active site, thereby showing that NRVS represents a powerful tool for the elucidation of complex biocatalysts containing multiple cofactors.

  9. Composite Material Hazard Assessment at Crash Sites

    DTIC Science & Technology

    2015-01-01

    12 8.2 NIOSH Method 7402, Asbestos by Transmission Electron Microscopy (TEM) ........... 12 8.3 Synergistic...National Institute for Occupational Safety and Health (NIOSH) Method 7400, Asbestos and Other Fibers, which was used during some of the events noted...these results. When response forces sampled for fibers, NIOSH Method 7400, Asbestos and Other Fibers by Phase Contrast Microscopy (PCM), was utilized

  10. Frequencies of restriction sites.

    PubMed Central

    Waterman, M S

    1983-01-01

    Restriction sites or other sequence patterns are usually assumed to occur according to a Poisson distribution with mean equal to the reciprocal of the probability of the given site or pattern. For situations where non-overlapping occurrences of patterns, such as restriction sites, are the objects of interest, this note shows that the Poisson assumption is frequently misleading. Both the case of base composition (independent bases) and of dinucleotide frequencies (Markov chains) are treated. Moreover, a new technique is presented which allows treatment of collections of patterns, where the departure from the Poisson assumption is even more striking. This later case includes double digests, and an example of a five enzyme digest is included. PMID:6324109

  11. Site selection

    SciTech Connect

    Olsen, C.W.

    1983-07-01

    The conditions and criteria for selecting a site for a nuclear weapons test at the Nevada Test Site are summarized. Factors considered are: (1) scheduling of drill rigs, (2) scheduling of site preparation (dirt work, auger hole, surface casing, cementing), (3) schedule of event (when are drill hole data needed), (4) depth range of proposed W.P., (5) geologic structure (faults, Pz contact, etc.), (6) stratigraphy (alluvium, location of Grouse Canyon Tuff, etc.), (7) material properties (particularly montmorillonite and CO/sub 2/ content), (8) water table depth, (9) potential drilling problems (caving), (10) adjacent collapse craters and chimneys, (11) adjacent expended but uncollapsed sites, (12) adjacent post-shot or other small diameter holes, (13) adjacent stockpile emplacement holes, (14) adjacent planned events (including LANL), (15) projected needs of Test Program for various DOB's and operational separations, and (16) optimal use of NTS real estate.

  12. Composition for detecting uranyl

    DOEpatents

    Baylor, Lewis C.; Stephens, Susan M.

    1995-01-01

    A composition for detecting the presence and concentration of a substance such as uranyl, comprising an organohalide covalently bonded to an indicator for said substance. The composition has at least one active OH site for forming a complex with the substance to be detected. The composition is made by reacting equimolar amounts of the indicator and the organohalide in a polar organic solvent. The absorbance spectrum of the composition-uranyl complex is shifted with respect to the absorbance spectrum of the indicator-uranyl complex, to provide better spectral resolution for detecting uranyl.

  13. Fire water systems in composite materials

    SciTech Connect

    Sundt, J.L.

    1993-12-31

    Due to corrosion problems in fire water systems offshore there is a need for a corrosion resistant material to improve the reliability of onboard fire fighting systems. Glass Reinforced Epoxy (GRE) pipe is seen as a cost effective and light weight alternative to metals. Through a test program run by AMAT, Advanced Materials a/s in collaboration with the Norwegian Fire and Research Laboratory (NBL, SINTEF), GRE pipes have proved to be viable materials for offshore fire water systems. The test program included furnace testing, jetfire testing and simulated explosion testing. GRE pipes (2--12 inches) from two suppliers were fire tested and evaluated. Both adhesively bonded joints and flange connections were tested. During the course of the project, application methods of passive fire protection and nozzle attachments were improved.

  14. High frequency mesozooplankton monitoring: Can imaging systems and automated sample analysis help us describe and interpret changes in zooplankton community composition and size structure — An example from a coastal site

    NASA Astrophysics Data System (ADS)

    Romagnan, Jean Baptiste; Aldamman, Lama; Gasparini, Stéphane; Nival, Paul; Aubert, Anaïs; Jamet, Jean Louis; Stemmann, Lars

    2016-10-01

    The present work aims to show that high throughput imaging systems can be useful to estimate mesozooplankton community size and taxonomic descriptors that can be the base for consistent large scale monitoring of plankton communities. Such monitoring is required by the European Marine Strategy Framework Directive (MSFD) in order to ensure the Good Environmental Status (GES) of European coastal and offshore marine ecosystems. Time and cost-effective, automatic, techniques are of high interest in this context. An imaging-based protocol has been applied to a high frequency time series (every second day between April 2003 to April 2004 on average) of zooplankton obtained in a coastal site of the NW Mediterranean Sea, Villefranche Bay. One hundred eighty four mesozooplankton net collected samples were analysed with a Zooscan and an associated semi-automatic classification technique. The constitution of a learning set designed to maximize copepod identification with more than 10,000 objects enabled the automatic sorting of copepods with an accuracy of 91% (true positives) and a contamination of 14% (false positives). Twenty seven samples were then chosen from the total copepod time series for detailed visual sorting of copepods after automatic identification. This method enabled the description of the dynamics of two well-known copepod species, Centropages typicus and Temora stylifera, and 7 other taxonomically broader copepod groups, in terms of size, biovolume and abundance-size distributions (size spectra). Also, total copepod size spectra underwent significant changes during the sampling period. These changes could be partially related to changes in the copepod assemblage taxonomic composition and size distributions. This study shows that the use of high throughput imaging systems is of great interest to extract relevant coarse (i.e. total abundance, size structure) and detailed (i.e. selected species dynamics) descriptors of zooplankton dynamics. Innovative

  15. A SEDIMENT TOXICITY EVALUATION OF THREE LARGE RIVER SYSTEMS

    EPA Science Inventory

    Sediment toxicity samples were collected from selected sites on the Ohio River, Missouri River and upper Mississippi River as part of the 2004 and 2005 Environmental Monitoring and Assessment Program-Great Rivers Ecosystems Study (EMAP-GRE). Samples were collected by compositing...

  16. Influence of advancing season on dietary composition, intake, site of digestion, and microbial efficiency in beef steers grazing season-long or twice-over rotation native range pastures in western North Dakota.

    PubMed

    Cline, H J; Neville, B W; Lardy, G P; Caton, J S

    2010-08-01

    Eight ruminally and duodenally cannulated beef steers (374 +/- 11 kg) were used to evaluate effects of advancing season and grazing treatment (season-long; SL or twice-over rotation; TOR) on dietary composition (Exp. 1 and 2), intake, site and extent of digestion, and microbial efficiency (Exp. 2) of native range. In Exp. 1, six 11-d sample collections were conducted from early June to mid-November 2000 and 2001. In vitro OM disappearance decreased (P < or = 0.04) for both years and both treatments with advancing season. Dietary N declined (P < or = 0.07), whereas fiber content increased (P < or = 0.05) during both years in both treatments, with the exception of NDF (P = 0.55) during yr 2 (YR2) on the TOR, as season advanced. In Exp. 2, three 11-d sample collections were conducted from late July to mid-September 2000 on SL and TOR. Organic matter intake (g/kg of BW) was not altered (P = 0.28) by grazing treatments or advancing season. Total tract OM and apparent ruminal OM digestion were not different (P > or = 0.12) between treatment and decreased (P < or = 0.04) with advancing season. Grazing treatment x season interactions (P = 0.06) were present for true ruminal OM digestibility with TOR being greater (P < or = 0.10) than SL in late August and mid-September but not late July. Microbial efficiency was greater (P = 0.07; 15.1 vs. 10.8 +/- 1.6 g of microbial N/kg of OM truly fermented) in SL than TOR, respectively. Degradable intake protein (g/d) was less (P = 0.05) in TOR than SL during late July to early August and not affected by treatment in late August or mid-September. However, undegradable intake protein was unchanged (P > or = 0.54) between treatment and across season. These data suggest that mixed-grass range forage consumed by cattle after late September is deficient in N, particularly degradable intake protein, and that forage intake may be insufficient to support adequate performance in lactating cows independent of grazing management strategies

  17. Physical characteristics and fish assemblage composition at site and mesohabitat scales over a range of streamflows in the Middle Rio Grande, New Mexico, winter 2011-12, summer 2012

    USGS Publications Warehouse

    Braun, Christopher L.; Pearson, Daniel K.; Porter, Michael D.; Moring, J. Bruce

    2015-01-01

    Water-quality properties were only collected during summer 2012, when low-streamflow conditions existed and water-quality properties were thought to be potentially most limiting to aquatic life. Area-weighted mean water temperatures tended to be higher at the sites that were sampled in August 2012 (25.57 degrees Celsius [°C]) compared to June 2012 (24.61 °C). The highest area-weighted mean water temperature at a given site (29.03 °C) was measured at the Lemitar site on August 7, 2012, coincident with the lowest measured discharge (4.13 cubic feet per second [ft3/s]). Area-weighted mean dissolved oxygen concentrations tended to be lower in August (7.46 milligrams per liter [mg/L]) compared to June (8.33 mg/L). The highest area-weighted mean dissolved oxygen concentration (9.13 mg/L) was measured at the Lemitar site on August 7, 2012, and the lowest area-weighted mean dissolved oxygen concentration (6.23 mg/L) was measured at the Los Padillas site on August 10, 2012. Area-weighted specific conductance in the sites upstream from La Joya did not exceed 400 microsiemens per centimeter (μS/cm) at 25 °C, whereas the area-weighted mean specific conductance at La Joya (837 μs/cm at 25 °C), Rio Salado (857 μs/cm at 25 °C), and Lemitar (1,300 μs/cm at 25 °C) were all well above the average of the area-weighted means for the 10 remaining sites (433 μs/cm at 25 °C). Lower area-weighted mean pH values were measured at the 3 sites in and near Albuquerque (La Orilla, Barelas, and Los Padillas—7.98, 8.08, and 7.81, respectively) compared to any of the 10 remaining sites, which had an overall mean pH of 8.44.

  18. Global Composite

    Atmospheric Science Data Center

    2013-04-19

    ... cover from one day to another. The lower panel is a composite in which red, green, and blue radiances from MISR's 70-degree ... In relatively clear ocean areas, the oblique-angle composite is generally brighter than its nadir counterpart due to enhanced ... Mar 2002 Images:  Global Composite location:  Global Images thumbnail:  ...

  19. Electrocatalyst compositions

    DOEpatents

    Mallouk, Thomas E.; Chan, Benny C.; Reddington, Erik; Sapienza, Anthony; Chen, Guoying; Smotkin, Eugene; Gurau, Bogdan; Viswanathan, Rameshkrishnan; Liu, Renxuan

    2001-09-04

    Compositions for use as catalysts in electrochemical reactions are described. The compositions are alloys prepared from two or more elemental metals selected from platinum, molybdenum, osmium, ruthenium, rhodium, and iridium. Also described are electrode compositions including such alloys and electrochemical reaction devices including such catalysts.

  20. Identification of constitutive androstane receptor and glucocorticoid receptor binding sites in the CYP2C19 promoter.

    PubMed

    Chen, Yuping; Ferguson, Stephen S; Negishi, Masahiko; Goldstein, Joyce A

    2003-08-01

    CYP2C19 is an important human drug-metabolizing enzyme that metabolizes a number of clinically used drugs including the antiulcer drug omeprazole, the anxiolytic drug diazepam, the beta-blocker propranolol, the antimalarial drug proguanil, certain antidepressants and barbiturates, and the prototype substrate S-mephenytoin. Previous studies show that compounds such as rifampicin and dexamethasone induce CYP2C19 both in vivo in humans and in vitro in human hepatocytes. This study examines the transcriptional regulation of CYP2C19. Analysis of the CYP2C19 promoter revealed a single constitutive androstane receptor (CAR) binding site (CAR-RE; -1891/-1876 bp) and a glucocorticoid-responsive element (GRE; -1750/-1736 bp). Gel-shift assays showed that CAR-RE binds CAR and pregnane X receptor (PXR). Cotransfection with hCAR, mCAR, or hPXR in HepG2 cells up-regulated transcription of CYP2C19 promoter constructs, whereas mutation of the -1891-bp CAR-RE abolished up-regulation. Expression with hCAR also up-regulated endogenous CYP2C19 mRNA content in HepG2 cells. Androstenol repressed the mCAR-mediated constitutive activation of the CYP2C19 promoter in HepG2 cells, whereas the potent mCAR ligand 1,4-bis[2-3,5-dichloropyridyloxyl)] benzene derepressed this response. Rifampicin produced a modest increase in promoter activity in cells cotransfected with hPXR. Dexamethasone activated the -2.7-kb CYP2C19 promoter constructs in HepG2 cells only in the presence of cotransfected glucocorticoid receptor (GR), whereas the GR antagonist mifepristone inhibits this response. Mutation of the GRE abolishes dexamethasone activation. This is the first study to identify nuclear receptor binding sites (CAR/PXR and GR) in the CYP2C19 promoter and to suggest that these receptors may up-regulate CYP2C19 constitutively and possibly its response to drugs.

  1. Composite Materials

    NASA Technical Reports Server (NTRS)

    1985-01-01

    Composites are lighter and stronger than metals. Aramid fibers like Kevlar and Nomex were developed by DuPont Corporation and can be combined in a honeycomb structure which can give an airplane a light, tough structure. Composites can be molded into many aerodynamic shapes eliminating rivets and fasteners. Langley Research Center has tested composites for both aerospace and non-aerospace applications. They are also used in boat hulls, military shelters, etc.

  2. Composites review

    NASA Technical Reports Server (NTRS)

    Hordonneau, A.

    1987-01-01

    The properties and applications of composite materials are reviewed. Glass, carbon, Kevlar, ceramic, whisker, and metal fibers are discussed along with polyester, epoxy, polyimide, Peek, carbon, ceramic, and metal matrices. The quantitative distribution of high technology fiber in various applications is given. The role of aerospace industry in the development and promotion of composite utilization is discussed. Consumption trends indicate a rapid development of the composite market.

  3. Energetic composites

    DOEpatents

    Danen, Wayne C.; Martin, Joe A.

    1993-01-01

    A method for providing chemical energy and energetic compositions of matter consisting of thin layers of substances which will exothermically react with one another. The layers of reactive substances are separated by thin layers of a buffer material which prevents the reactions from taking place until the desired time. The reactions are triggered by an external agent, such as mechanical stress or an electric spark. The compositions are known as metastable interstitial composites (MICs). This class of compositions includes materials which have not previously been capable of use as energetic materials. The speed and products of the reactions can be varied to suit the application.

  4. Energetic composites

    DOEpatents

    Danen, W.C.; Martin, J.A.

    1993-11-30

    A method for providing chemical energy and energetic compositions of matter consisting of thin layers of substances which will exothermically react with one another. The layers of reactive substances are separated by thin layers of a buffer material which prevents the reactions from taking place until the desired time. The reactions are triggered by an external agent, such as mechanical stress or an electric spark. The compositions are known as metastable interstitial composites (MICs). This class of compositions includes materials which have not previously been capable of use as energetic materials. The speed and products of the reactions can be varied to suit the application. 3 figures.

  5. Composite floorpan

    SciTech Connect

    Frutiger, R.L.; Baskar, S.

    1993-02-01

    Composite applications for automotive components have been a topic of increased interest. Some applications--load-bearing composites such as bumpers and leaf springs--have been implemented successfully in production vehicles. On the other hand, semi-structural load-bearing composites such as floorpans have not been investigated as extensively for stiffness, strength, and durability. Past studies have used structural composites to achieve parts consolidation in van crossmembers. A rear floorpan has also been demonstrated in composites. A hybrid vehicle structure consisting of a composite passenger module on a steel frame has been proposed. Assessments of the energy management of full composite front structures have also been reported. There remains a need to assess structural composites for a major load-bearing panel with real-vehicle packaging and design requirements; a floorplan is one such application. This design concept might be used in a space-frame vehicle structure in which composite panels could be used to complete the structure and provide additional torsional rigidity while meeting local strength and stiffness requirements.

  6. Implementation: Preparing the Site.

    ERIC Educational Resources Information Center

    Epstein, Susan Baerg

    1983-01-01

    Considers site requirements that should be specified by the library and the vendor for a library automated system located at a central site away from the library, including size of site, the environment, cleanliness, electrical power, security/safety (fire, restricted access), site certification, telecommunications, and terminal sites. (EJS)

  7. Body Composition.

    ERIC Educational Resources Information Center

    Mayhew, Jerry L.

    1981-01-01

    Body composition refers to the types and amounts of tissues which make up the body. The most acceptable method for assessing body composition is underwater weighing. A subcutaneous skinfold provides a quantitative measurement of fat below the skin. The skinfold technique permits a valid estimate of the body's total fat content. (JN)

  8. Electrode compositions

    DOEpatents

    Block, J.; Fan, X.

    1998-10-27

    An electrode composition is described for use as an electrode in a non-aqueous battery system. The electrode composition contains an electrically active powder in a solid polymer and, as a dispersant, a C{sub 8}-C{sub 15} alkyl capped oligomer of a hexanoic acid that is electrochemically inert at 2.5--4.5 volts.

  9. Electrode compositions

    DOEpatents

    Block, Jacob; Fan, Xiyun

    1998-01-01

    An electrode composition for use as an electrode in a non-aqueous battery system. The electrode composition contains an electrically active powder in a solid polymer and, as a dispersant, a C.sub.8 -C.sub.15 alkyl capped oligomer of a hexanoic acid that is electrochemically inert at 2.5-4.5 volts.

  10. 40 CFR 761.350 - Subsampling from composite samples.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 32 2012-07-01 2012-07-01 false Subsampling from composite samples...-Site Disposal, in Accordance With § 761.61 § 761.350 Subsampling from composite samples. (a) Preparing the composite. Composite the samples (eight from a flattened pile; eight or more from a conical...

  11. 40 CFR 761.350 - Subsampling from composite samples.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 32 2013-07-01 2013-07-01 false Subsampling from composite samples...-Site Disposal, in Accordance With § 761.61 § 761.350 Subsampling from composite samples. (a) Preparing the composite. Composite the samples (eight from a flattened pile; eight or more from a conical...

  12. 40 CFR 761.350 - Subsampling from composite samples.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 31 2011-07-01 2011-07-01 false Subsampling from composite samples...-Site Disposal, in Accordance With § 761.61 § 761.350 Subsampling from composite samples. (a) Preparing the composite. Composite the samples (eight from a flattened pile; eight or more from a conical...

  13. 40 CFR 761.350 - Subsampling from composite samples.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 31 2014-07-01 2014-07-01 false Subsampling from composite samples...-Site Disposal, in Accordance With § 761.61 § 761.350 Subsampling from composite samples. (a) Preparing the composite. Composite the samples (eight from a flattened pile; eight or more from a conical...

  14. Ocean Disposal Site Monitoring

    EPA Pesticide Factsheets

    EPA is responsible for managing all designated ocean disposal sites. Surveys are conducted to identify appropriate locations for ocean disposal sites and to monitor the impacts of regulated dumping at the disposal sites.

  15. Hanford Site Development Plan

    SciTech Connect

    Rinne, C.A.; Curry, R.H.; Hagan, J.W.; Seiler, S.W.; Sommer, D.J. ); Yancey, E.F. )

    1990-01-01

    The Hanford Site Development Plan (Site Development Plan) is intended to guide the short- and long-range development and use of the Hanford Site. All acquisition, development, and permanent facility use at the Hanford Site will conform to the approved plan. The Site Development Plan also serves as the base document for all subsequent studies that involve use of facilities at the Site. This revision is an update of a previous plan. The executive summary presents the highlights of the five major topics covered in the Site Development Plan: general site information, existing conditions, planning analysis, Master Plan, and Five-Year Plan. 56 refs., 67 figs., 31 tabs.

  16. Comparing Composites.

    ERIC Educational Resources Information Center

    Mathras, Michael S.

    1993-01-01

    Presents an activity that models the work of chemical engineers. Students design, fabricate, and perform mechanical tests on plaster matrix composites and compare the strength to mass ratios of several products. (PR)

  17. Compositional Idioms.

    ERIC Educational Resources Information Center

    Pitt, David; Katz, Jerrold J.

    2000-01-01

    Argues that there is a large class of expressions, typified by "plastic flower," stuffed animal," and "kosher bacon," that have a unique semantics combining compositional, idiomatic, and decompositional interpretation. (Author/VWL)

  18. A-site compositional effects in Ga-doped hollandite materials of the form BaxCsyGa2x+yTi8−2x−yO16: implications for Cs immobilization in crystalline ceramic waste forms

    PubMed Central

    Xu, Yun; Wen, Yi; Grote, Rob; Amoroso, Jake; Shuller Nickles, Lindsay; Brinkman, Kyle S.

    2016-01-01

    The hollandite structure is a promising crystalline host for Cs immobilization. A series of Ga-doped hollandite BaxCsyGa2x+yTi8−2x−yO16 (x = 0, 0.667, 1.04, 1.33; y = 1.33, 0.667, 0.24, 0) was synthesized through a solid oxide reaction method resulting in a tetragonal hollandite structure (space group I4/m). The lattice parameter associated with the tunnel dimension was found to increases as Cs substitution in the tunnel increased. A direct investigation of cation mobility in tunnels using electrochemical impedance spectroscopy was conducted to evaluate the ability of the hollandite structure to immobilize cations over a wide compositional range. Hollandite with the largest tunnel size and highest aspect ratio grain morphology resulting in rod-like microstructural features exhibited the highest ionic conductivity. The results indicate that grain size and optimized Cs stoichiometry control cation motion and by extension, the propensity for Cs release from hollandite. PMID:27273791

  19. Chemical and Isotopic Composition and Gas Concentrations of Ground Water and Surface Water from Selected Sites At and Near the Idaho National Engineering and Environmental Laboratory, Idaho, 1994-97

    SciTech Connect

    E. Busenberg; L. N. Plummer; M. W. Doughten; P. K. Widman; R. C. Bartholomay

    2000-05-30

    >From May 1994 through May 1997, the US Geological Survey, in cooperation with the US Department of Energy, collected water samples from 86 wells completed in the Snake River Plain aquifer at and near the Idaho National Engineering and Environmental Laboratory. The samples were analyzed for a variety of chemical constituents including all major elements and 22 trace elements. Concentrations of scandium, yttrium, and the lanthanide series were measured in samples from 11 wells and 1 hot spring. The data will be used to determine the fraction of young water in the ground water. The fraction of young water must be known to calculate the ages of ground water using chlorofluorocarbons. The concentrations of the isotopes deuterium, oxygen-18, carbon-13, carbon-14, and tritium were measured in many ground water, surface-water and spring samples. The isotopic composition will provide clues to the origin and sources of water in the Snake River Plain aquifer. Concentrations ! of helium-3 , helium-4, total helium, and neon were measured in most groundwater samples, and the results will be used to determine the recharge temperature, and to date the ground waters.

  20. Hydride compositions

    DOEpatents

    Lee, Myung, W.

    1994-01-01

    Disclosed are a composition for use in storing hydrogen and a method for making the composition. The composition comprises a mixture of two or more hydrides, each hydride having a different series of hydrogen sorption isotherms that contribute to the overall isotherms of the mixture. The hydrides are chosen so that the isotherms of the mixture have regions wherein the H equilibrium pressure increases with increasing hydrogen, preferably linearly. The isotherms of the mixture can be adjusted by selecting hydrides with different isotherms and by varying the amounts of the individual hydrides, or both. Preferably, the mixture is made up of hydrides that have isotherms with substantially flat plateaus and in nearly equimolar amounts. The composition is activated by degassing, exposing to H, and then heating below the softening temperature of any of the constituents. When the composition is used to store hydrogen, its hydrogen content can be found simply by measuring P{sub H}{sub 2} and determining H/M from the isothermic function of the composition.

  1. Hydride compositions

    DOEpatents

    Lee, Myung W.

    1995-01-01

    A composition for use in storing hydrogen, and a method for making the composition. The composition comprises a mixture of two or more hydrides, each hydride having a different series of hydrogen sorption isotherms that contribute to the overall isotherms of the mixture. The hydrides are chosen so that the isotherms of the mixture have regions wherein the hydrogen equilibrium pressure increases with increasing hydrogen, preferably linearly. The isotherms of the mixture can be adjusted by selecting hydrides with different isotherms and by varying the amounts of the individual hydrides, or both. Preferably, the mixture is made up of hydrides that have isotherms with substantially flat plateaus and in nearly equimolar amounts. The composition is activated by degassing, exposing to hydrogen and then heating at a temperature below the softening temperature of any of the. constituents so that their chemical and structural integrity is preserved. When the composition is used to store hydrogen, its hydrogen content can be found simply by measuring P.sub.H.sbsb.2 and determining H/M from the isothermic function of the composition.

  2. Hanford Site Development Plan

    SciTech Connect

    Hathaway, H.B.; Daly, K.S.; Rinne, C.A.; Seiler, S.W.

    1993-05-01

    The Hanford Site Development Plan (HSDP) provides an overview of land use, infrastructure, and facility requirements to support US Department of Energy (DOE) programs at the Hanford Site. The HSDP`s primary purpose is to inform senior managers and interested parties of development activities and issues that require a commitment of resources to support the Hanford Site. The HSDP provides an existing and future land use plan for the Hanford Site. The HSDP is updated annually in accordance with DOE Order 4320.1B, Site Development Planning, to reflect the mission and overall site development process. Further details about Hanford Site development are defined in individual area development plans.

  3. Structure of the unique SEFIR domain from human interleukin 17 receptor A reveals a composite ligand-binding site containing a conserved α-helix for Act1 binding and IL-17 signaling

    SciTech Connect

    Zhang, Bing; Liu, Caini; Qian, Wen; Han, Yue; Li, Xiaoxia; Deng, Junpeng

    2014-05-01

    Crystal structure of the SEFIR domain from human IL-17 receptor A provides new insights into IL-17 signaling. Interleukin 17 (IL-17) cytokines play a crucial role in mediating inflammatory and autoimmune diseases. A unique intracellular signaling domain termed SEFIR is found within all IL-17 receptors (IL-17Rs) as well as the key adaptor protein Act1. SEFIR-mediated protein–protein interaction is a crucial step in IL-17 cytokine signaling. Here, the 2.3 Å resolution crystal structure of the SEFIR domain of IL-17RA, the most commonly shared receptor for IL-17 cytokine signaling, is reported. The structure includes the complete SEFIR domain and an additional α-helical C-terminal extension, which pack tightly together to form a compact unit. Structural comparison between the SEFIR domains of IL-17RA and IL-17RB reveals substantial differences in protein topology and folding. The uniquely long insertion between strand βC and helix αC in IL-17RA SEFIR is mostly well ordered, displaying a helix (αCC′{sub ins}) and a flexible loop (CC′). The DD′ loop in the IL-17RA SEFIR structure is much shorter; it rotates nearly 90° with respect to the counterpart in the IL-17RB SEFIR structure and shifts about 12 Å to accommodate the αCC′{sub ins} helix without forming any knots. Helix αC was identified as critical for its interaction with Act1 and IL-17-stimulated gene expression. The data suggest that the heterotypic SEFIR–SEFIR association via helix αC is a conserved and signature mechanism specific for IL-17 signaling. The structure also suggests that the downstream motif of IL-17RA SEFIR together with helix αC could provide a composite ligand-binding surface for recruiting Act1 during IL-17 signaling.

  4. Site amplifications for generic rock sites

    USGS Publications Warehouse

    Boore, D.M.; Joyner, W.B.

    1997-01-01

    Seismic shear-wave velocity as a function of depth for generic rock sites has been estimated from borehole data and studies of crustal velocities, and these velocities have been used to compute frequency-dependent amplifications for zero attenuation for use in simulations of strong ground motion. We define a generic rock site as one whose velocity at shallow depths equals the average of those from the rock sites sampled by the borehole data. Most of the boreholes are in populated areas; for that reason, the rock sites sampled are of particular engineering significance. We consider two generic rock sites: rock, corresponding to the bulk of the borehole data, and very hard rock, such as is found in glaciated regions in large areas of eastern North America or in portions of western North America. The amplifications on rock sites can be in excess of 3.5 at high frequencies, in contrast to the amplifications of less than 1.2 on very hard rock sites. The consideration of unattenuated amplification alone is computationally convenient, but what matters for ground-motion estimation is the combined effect of amplification and attenuation. For reasonable values of the attenuation parameter K0, the combined effect of attenuation and amplification for rock sites peaks between about 2 and 5 Hz with a maximum level of less than 1.8. The combined effect is about a factor of 1.5 at 1 Hz and is less than unity for frequencies in the range of 10 to 20 Hz (depending on K0). Using these amplifications, we find provisional values of about ???? = 70 bars and K0 = 0.035 sec for rock sites in western North America by fitting our empirically determined response spectra for an M 6.5 event to simulated values. The borehole data yield shear velocities (V??30) of 618 and 306 m/sec for "rock" and "soil" sites, respectively, when averaged over the upper 30 m. From this, we recommend that V??30 equals 620 and 310 m/sec for applications requiring the average velocity for rock and soil sites in

  5. Investigation of Response Changes in the GRE Revised General Test

    ERIC Educational Resources Information Center

    Liu, Ou Lydia; Bridgeman, Brent; Gu, Lixiong; Xu, Jun; Kong, Nan

    2015-01-01

    Research on examinees' response changes on multiple-choice tests over the past 80 years has yielded some consistent findings, including that most examinees make score gains by changing answers. This study expands the research on response changes by focusing on a high-stakes admissions test--the Verbal Reasoning and Quantitative Reasoning measures…

  6. Lubricating compositions

    SciTech Connect

    Harrison, J.J.; Campbell, C.B.

    1993-08-03

    A lubricating composition is described comprising a major amount of oil of lubricating viscosity and a minor amount of an oil-soluble composition selected from the group consisting of: (A) an alkali metal salt of a polyalkenyl succinimide which is the reaction product of (a) a polyalkenyl succinic acid or polyalkenyl succinic anhydride, with (b) an amine selected from the group consisting of polyamines and hydroxy-substituted polyamines; and (B) a mixture comprising: (1) an oil-soluble alkali metal compound; and (2) a polyalkenyl succinimide which is the reaction product of (a) a polyalkenyl succinic acid or polyalkenyl succinic anhydride, with (b) an amine selected from the group consisting of polyamines and hydroxy-substituted polyamines; wherein the polyalkenyl succinic acid and polyalkenyl succinic anhydride are prepared by a thermal reaction, and the lubricating composition has a sufficient amount of basic nitrogen content so that the use of from 7.91 to about 50 mmoles of alkali metal/kg lubricant composition provides for reductions in the lower piston deposits as compared to the lubricant composition not containing alkali.

  7. Photoimageable composition

    DOEpatents

    Simison, Kelby Liv; Dentinger, Paul

    2003-11-11

    The use of selected buffering amines in a photoimageable composition prevents process bias which with conventional photoresists causes designed features to be distorted, especially in corners and high resolution features. It is believed that the amines react with the catalysts, e.g., photoacids, generated to create an inert salt. The presence of the amines also increases resolution. Suitable photoimageable compositions includes: (a) a multifunctional polymeric epoxy resin that is dissolved in an organic solvent wherein the epoxy resin comprises oligomers of bisphenol A that is quantitatively protected by glycidyl ether and wherein the oligomers have an average functionality that ranges from about 3 to 12; (b) a photoactive compound; and (c) an amine that is selected from the group consisting of triisobutylamine, 1,8-bis(dimethylamino)naphthalene (also known as PROTON SPONGET.TM.), 2,2'-diazabicyclo[2.2.2] octane and mixtures thereof. The photoimageable composition is particularly suited for producing high aspect ratio metal microstructures.

  8. Surfactant compositions

    SciTech Connect

    Novakovic, M.; Abend, P.G.

    1987-09-29

    A surfactant composition is described for subsequent addition to a soap slurring comprising an acyloxy alkane sulfonate salt. The sulfonate salt is present in an amount by weight of about 44 percent of about 56 percent. The polyol is present in an amount by weight of about 2 percent to about 6 percent, and water is present in an amount by weight of 26 to 36 percent. The composition constituting a solid reversible solution at ambient temperature and having a solids content of about 58 to 72 percent, whereby subsequent addition of the surfactant composition to a soap slurry results in formation of a soap/detergent bar having a smooth texture, uniform wear properties and a lack of grittiness.

  9. Composite piston

    NASA Technical Reports Server (NTRS)

    Taylor, Allan H. (Inventor)

    1988-01-01

    A composite piston structure is disclosed which provides a simple and reliable means for joining a carbon-carbon or ceramic piston cap with a metallic piston body. Attachment is achieved by means of a special geometry which compensates for differences in thermal expansion without complicated mechanical fastening devices. The shape employs a flange created by opposed frustoconical shapes with coincident vertices intersecting on the radial centerline of the piston in order to retain the piston cap. The use of carbon-carbon for the piston cap material allows a close fit between the piston and a cylinder wall, eliminating the need for piston rings. The elimination of extra mechanical parts of previous composite pistons provides a lightweight composite piston capable of extended high temperature operation.

  10. Composite material

    DOEpatents

    Hutchens, Stacy A [Knoxville, TN; Woodward, Jonathan [Solihull, GB; Evans, Barbara R [Oak Ridge, TN; O'Neill, Hugh M [Knoxville, TN

    2012-02-07

    A composite biocompatible hydrogel material includes a porous polymer matrix, the polymer matrix including a plurality of pores and providing a Young's modulus of at least 10 GPa. A calcium comprising salt is disposed in at least some of the pores. The porous polymer matrix can comprise cellulose, including bacterial cellulose. The composite can be used as a bone graft material. A method of tissue repair within the body of animals includes the steps of providing a composite biocompatible hydrogel material including a porous polymer matrix, the polymer matrix including a plurality of pores and providing a Young's modulus of at least 10 GPa, and inserting the hydrogel material into cartilage or bone tissue of an animal, wherein the hydrogel material supports cell colonization in vitro for autologous cell seeding.

  11. Photoimageable composition

    DOEpatents

    Dentinger, Paul; Krafick, Karen L.; Simison, Kelby Liv

    2005-02-22

    The use of photoacid generators including an alkoxyphenylphenyliodonium salt and/or bis(t-butylphenyl)iodonium salt in a photoimageable composition helps improve resolution. Suitable photoimageable compositions includes: (a) a multifuctional polymeric epoxy resin that is dissolved in an organic solvent wherein the epoxy resin comprises oligomers of bisphenol A that is quantitatively protected by glycidyl ether and wherein the oligomers have an average functionality that ranges from about 3 to 12; and a photoacid generator comprising an alkoxyphenylphenyliodonium salt and/or bis(t-butylphenyl)iodonium salt. Preferred alkoxyphenylphenyliodonium salts include 4-octyloxyphenyl phenyliodonium hexafluoroantimonate and 4-methoxyphenyl phenyliodonium hexafluoroantimonate. The photoimageable composition is particularly suited for producing high aspect ratio microstructures.

  12. Physical composition

    NASA Astrophysics Data System (ADS)

    Healey, Richard

    2013-02-01

    Atomistic metaphysics motivated an explanatory strategy which science has pursued with great success since the scientific revolution. By decomposing matter into its atomic and subatomic parts physics gave us powerful explanations and accurate predictions as well as providing a unifying framework for the rest of science. The success of the decompositional strategy has encouraged a widespread conviction that the physical world forms a compositional hierarchy that physics and other sciences are progressively articulating. But this conviction does not stand up to a closer examination of how physics has treated composition, as a variety of case studies will show.

  13. Phosphorescent compositions, methods of making the compositions, and methods of using the compositions

    DOEpatents

    Jia, Weiyi; Wang, Xiaojun; Jia, George D.; Lewis, Linda; Yen, Laurel C.

    2014-06-24

    Compositions, methods of making compositions, materials including compositions, crayons including compositions, paint including compositions, ink including compositions, waxes including compositions, polymers including compositions, vesicles including the compositions, methods of making each, and the like are disclosed.

  14. Phosphorescent compositions, methods of making the compositions, and methods of using the compositions

    DOEpatents

    Jia, Weiyi; Wang, Xiaojun; Yen, William; Yen, Laurel C.; Jia, George D.

    2012-12-04

    Compositions, methods of making compositions, materials including compositions, crayons including compositions, paint including compositions, ink including compositions, waxes including compositions, polymers including compositions, vesicles including the compositions, methods of making each, and the like are disclosed.

  15. Music Composition

    ERIC Educational Resources Information Center

    Helfer, Jason A.

    2015-01-01

    Historically, music programs in K-12 schools have emphasized performance opportunities for children and young people. Until the release of the 1994 National Standards in Music, targeted instruction in composition was frequently overlooked due to the emphasis on performance as well as the expectations of what a school music program ought to produce…

  16. COMPOSITE ELEMENT

    DOEpatents

    Schaner, B.E.; Wolfe, R.A.

    1962-12-18

    Composite fuel eiements of the sandwich type are reported. The invention resides in the use of a layer of graphite on the interfaces of the flssile material and the cladding to prevent interdiffusion of the fissile material and the ciadding material. (AEC)

  17. Superfund Site Assessment Process

    EPA Pesticide Factsheets

    Learn about the site assessment process used by the federal Superfund program to evaluate releases of hazardous substances that may pose a threat to human health or the environment and select an appropriate program for sites needing cleanup.

  18. Pesticide Use Site Index

    EPA Pesticide Factsheets

    The Pesticide Use Site Index will help a company (or other applicant) identify which data requirements are needed to register a pesticide product. It provides information on pesticide use sites and pesticide major use patterns.

  19. SMARTE'S SITE CHARACTERIZATION TOOL

    EPA Science Inventory

    Site Characterization involves collecting environmental data to evaluate the nature and extent of contamination. Environmental data could consist of chemical analyses of soil, sediment, water or air samples. Typically site characterization data are statistically evaluated for thr...

  20. Past Project Expo Sites

    EPA Pesticide Factsheets

    This page provides information for Project Expo sites that were featured at the LMOP Conferences in 2013 and 2014. Project Expo sites were featured as being interested in identifying project partners for the development of an LFG energy project.

  1. Chromosomal fragile site, FRA16A: Implications for fragile site genesis

    SciTech Connect

    Richards, R.I.; Nancarrow, J.K.; Mangelsdorf, M.

    1994-09-01

    Fragile sites are chemically induced non-staining gaps in chromosomes. Different fragile sites vary in frequency in the population and in the chemistry of their induction. The fragile sites sequenced to date (FRAXA and FRAXE) are rare, folate sensitive sites located on the X chromosomes. They have similar DNA sequence composition of a p(CCG)n repeat adjacent to a methylatable CpG island. Individuals expressing the fragile site have an unstable expanded repeat and methylation of the adjacent CpG island. FRAXA is associated with the most common form of familial mental retardation, Fragile X Syndrome. In order to further understand the relationship between the DNA sequence composition, position in the genome, and the chemistry of induction of fragile sites, we have characterized the rare, folate sensitive fragile site on human chromosome 16 referred to as FRA16A. The molecular basis of FRA16A was found to be expansion of a normally polymorphic p(CCG)n repeat. This repeat was adjacent to a CpG island that was methylated in fragile-site-expressing individuals. The FRA16A locus in individuals who do not express the fragile site is not a site of DNA methylation (imprinting) which suggests that the methylation associated with fragile sites may be a consequence and not a cause of their genesis. We have analyzed the normal repeat copy numbers for the fragile site p(CCG)n repeats in European, Japanese and Indian populations. While the FRAXA and FRAXE repeats show similar distributions of copy numbers, the FRA16A p(CCG)n repeat in Europeans has a greater range and number of alleles (23.7% have n>25) than its Japanese and Indian counterparts. In conjunction with our previous data demonstrating linkage disequilibrium (founder chromosomes) at the FRAXA locus, these data suggest that certain p(CCG)n repeats are inherently unstable.

  2. Site Environmental Report, 1993

    SciTech Connect

    Not Available

    1994-06-01

    The Site Environmental Report (SER) is prepared annually in accordance with DOE Order 5400.1, ``General Environmental Protection Program.`` This 1993 SER provides the general public as well as scientists and engineers with the results from the site`s ongoing Environmental Monitoring Program. Also included in this report is information concerning the site`s progress toward achieving full compliance with requirements set forth by DOE, US Environmental Protection Agency (USEPA), and Ohio EPA (OEPA). For some readers, the highlights provided in the Executive Summary may provide sufficient information. Many readers, however, may wish to read more detailed descriptions of the information than those which are presented here.

  3. Site Development Planning Handbook

    SciTech Connect

    1981-01-01

    The Handbook provides facility managers and site planners at DOE organizations responsible for planning site developments and facilities utilization a step-by-step planning checklist to ensure that planners at each site are focusing on Department-wide goals and objectives. It begins with a brief discussion of a site development-by-objectives program design to promote, recognize, and implement opportunities for improvements in site utilization through planning. Additional information is included on: assembling existing data, plans, programs, and procedures; establishing realistic objectives; identifying site problems, opportunities; and development needs; determining priorities among development needs; developing short and long-range plans; choosing the right development solutions and meeting minimum legal site restrictions; presenting the plan; implementing elements of the plan; monitoring and reporting plan status; and modifying development program plans. (MCW)

  4. Bulk Site Reference Materials

    SciTech Connect

    Barich, J.J. III; Jones, R.R. Sr.

    1996-12-31

    The selection, manufacture and use of Bulk Site Reference Materials (BSRMs) at hazardous waste sites is discussed. BSRMs are useful in preparing stabilization/solidification (S/S) formulations for soils, ranking competing S/S processes, comparing S/S alternatives to other technologies, and in interpreting data from different test types. BSRMs are large volume samples that are representative of the physical and chemical characteristics of a site soil, and that contain contaminants at reasonably high levels. A successful BSRM is extremely homogeneous and well-characterized. While not representative of any point on the site, they contain the contaminants of the site in the matrices of the site. Design objectives for a BSRM are to produce a material that (1) maintains good fidelity to site matrices and contaminants, and (2) exhibits the lowest possible relative standard deviation.

  5. Atmospheric composition

    NASA Technical Reports Server (NTRS)

    Daniels, G. E.

    1973-01-01

    The earth's atmosphere is made up of a number of gases in different relative amounts. Near sea level and up to about 90 km, the amount of these atmospheric gases in clean, relatively dry air is practically constant. Four of these gases, nitrogen, oxygen, argon, and carbon dioxide, make up 99.99 percent by volume of the atmosphere. Two gases, ozone and water vapor, change in relative amounts, but the total amount of these two is very small compared to the amount of the other gases. The atmospheric composition shown in a table can be considered valid up to 90 km geometric altitude. Above 90 km, mainly because of molecular dissociation and diffusive separation, the composition changes.

  6. Composite Strengthening.

    DTIC Science & Technology

    1985-01-01

    particle into a spherical hole in the matrix When a composite material is subjected to a has been analytically described by Lee et al. temperature...Subsequently, the *- specimen were solution-annealed at 823 K for 12 hours and ice water quenched in order to keep the Mg 2 Si phase in the solution and thus...described by rotating water flooded wheel covered with 400 then 600 grit Ashby𔄀 predicts additional dislocations in the matrix. These paper to remove

  7. Composite Javelin

    NASA Technical Reports Server (NTRS)

    1979-01-01

    In the photo at right, a unique, advanced type of javelin is undergoing "flight test." The javelin was designed to meet specifications laid down by the International Amateur Athletic Federation, but it has better stability than conventional javelins, according to college athletes who tested it. Its development incorporated aerodynamic design techniques and a composite material developed by NASA's Langley Research Center for aircraft and spacecraft.

  8. TOPOGRAPHIC SITE RESPONSE AT HARD ROCK SITES

    NASA Astrophysics Data System (ADS)

    Yong, A. K.; Hough, S. E.

    2009-12-01

    Site (material impedance) and topographic (geometric form) effects are known to be key factors that influence seismic ground motions. To characterize site effects, Yong et al. (2009) developed a terrain-based Vs30 prediction model using an automated classification method (Iwahashi and Pike, 2007) that relied on taxonomic criteria (slope gradient, local convexity and surface texture) developed from geomorphometry to identify 16 terrain types from a 1-km spatial resolution (SRTM30 data) digital elevation model of California. On the basis that the underlying framework for this model contains parameters (esp., local convexity) which aptly describe the geometry (i.e., base to height ratio) of relief features that are known to also control the behavior of ground motions (Bouchon, 1973), we extend our investigation to study topographic effects. Focusing on sites that would generally be considered “hard rock,” the classification scheme distinguishes 7 separate terrain types ranging from “moderately eroded mountains” to “well dissected alpine summits.” Observed 1-Hz amplification factors at Southern California Seismographic Network sites reveal a weak but systematic correlation with these 7 terrain types. Significant scatter is also found within each terrain type; typical standard deviations of logarithmic amplification factors are 0.2-0.3. Considering stations that have high amplification factors, we find some that have apparently been misclassified due to data resolution limitations. Many of the remaining stations with higher than expected amplifications are located on or near topographic peaks or ridges. The unusually high amplification factors at hard-rock sites, typically factors of 1.5-2, can most plausibly be explained as a topographic effect.

  9. Viking landing sites

    NASA Technical Reports Server (NTRS)

    Panagakos, N.

    1973-01-01

    A valley near the mouth of the 20,000-foot-deep Martian Grand Canyon has been chosen by NASA as the site of its first automated landing on the planet Mars. The landing site for the second mission of the 1975-76 Viking spacecraft will probably be an area about 1,000 miles northeast of the first site, where the likelihood of water increases the chances of finding evidence of life.

  10. Site environmental report summary

    SciTech Connect

    Not Available

    1992-12-31

    In this summary of the Fernald 1992 Site Environmental Report the authors will describe the impact of the Fernald site on man and the environment and provide results from the ongoing Environmental Monitoring Program. Also included is a summary of the data obtained from sampling conducted to determine if the site complies with DOE, US Environmental Protection Agency (USEPA), and Ohio EPA (OEPA) requirements. These requirements are set to protect both man and the environment.

  11. Site environmental programs

    SciTech Connect

    Schmidt, J.W.; Hanf, R.W.

    1995-06-01

    This section of the 1994 Hanford Site Environmental Report summarizes the site environmental programs. Effluent monitoring and environmental surveillance programs monitor for impacts from operations in several areas. The first area consists of the point of possible release into the environment. The second area consists of possible contamination adjacent to DOE facilities, and the third area is the general environment both on and off the site.

  12. 1994 Site environmental report

    SciTech Connect

    1995-07-01

    The Fernald site is a Department of Energy (DOE)-owned facility that produced high-quality uranium metals for military defense for nearly 40 years. DOE suspended production at the site in 1989 and formally ended production in 1991. Although production activities have ceased, the site continues to examine the air and liquid pathways as possible routes through which pollutants from past operations and current remedial activities may leave the site. The Site Environmental Report (SER) is prepared annually in accordance with DOE Order 5400.1, General Environmental Protection Program. This 1994 SER provides the general public as well as scientists and engineers with the results from the site`s ongoing Environmental Monitoring Program. Also included in this report is information concerning the site`s progress toward achieving full compliance with requirements set forth by DOE, U.S. Environmental Protection Agency (USEPA), and Ohio EPA (OEPA). For some readers, the highlights provided in this Executive Summary may provide sufficient information. Many readers, however, may wish to read more detailed descriptions of the information than those which are presented here. All information presented in this summary is discussed more fully in the main body of this report.

  13. Lubricant compositions

    SciTech Connect

    Johnson, A.L.; Lawson, R.D.; Root, J.C.

    1981-12-15

    Lubricant compositions adapted for use under extreme pressure conditions are disclosed. They comprise a major proportion of a lubricating grease, and a minor proportion of an additive consisting essentially of a solid, oil insoluble arylene sulfide polymer, and a metal salt, particularly an alkali metal or alkaline earth metal salt, particularly an alkali metal or alkaline earth metal salt of a phosphorus acid, for example, mono- or dicalcium phosphate, or an alkali metal or alkaline earth metal carbonate exemplified by calcium carbonate, or a mixture of such a phosphate salt and carbonate.

  14. SITE CHARACTERIZATION USING BIRD SPECIES COMPOSITION IN EASTERN OREGON, USA

    EPA Science Inventory

    We conducted riparian bird surveys at 25 randomly selected stream reaches in the John Day River Basin of eastern Oregon as part of the U.S. Environmental Protection Agency's Environmental Monitoring and Assessment Program (EMAP). At each reach along a kilometer-length transect, ...

  15. Concrete compositions and methods

    DOEpatents

    Chen, Irvin; Lee, Patricia Tung; Patterson, Joshua

    2015-06-23

    Provided herein are compositions, methods, and systems for cementitious compositions containing calcium carbonate compositions and aggregate. The compositions find use in a variety of applications, including use in a variety of building materials and building applications.

  16. Strategy for selecting Mars Pathfinder landing sites

    NASA Technical Reports Server (NTRS)

    Greeley, Ronald; Kuzmin, Ruslin O.

    1994-01-01

    A strategy for Pathfinder site selection must be developed that is fundamentally different from most previous considerations. At least two approaches can be identified. In one approach, the objective is to select a site representing a key geologic unit on Mars, i.e., a unit that is widespread, easily recognized, and used frequently as a datum in various investigations. The second approach is to select a site that potentially affords access to a wide variety of rock types. Because rover range is limited, rocks from a variety of sources must be assembled in a small area for sampling. Regardless of the approach taken in site selection, the Pathfinder site should include eolian deposits and provisions should be made to obtain measurements on soils. A recommended approach for selecting the Mars Pathfinder landing site is to identify a deltaic deposit, composed of sediments derived from sources of various ages and geologic units that shows evidence of eolian activity. The site should be located as close as possible to the part of the outwash where rapid deposition occurred because the likelihood of 'sorting' by size and composition increases with distance, decreasing the probability of heterogeneity. In addition, it is recommended that field operation tests be conducted to gain experience and insight into conducting science with Pathfinder.

  17. Specific regulatory motifs predict glucocorticoid responsiveness of hippocampal gene expression.

    PubMed

    Datson, N A; Polman, J A E; de Jonge, R T; van Boheemen, P T M; van Maanen, E M T; Welten, J; McEwen, B S; Meiland, H C; Meijer, O C

    2011-10-01

    The glucocorticoid receptor (GR) is an ubiquitously expressed ligand-activated transcription factor that mediates effects of cortisol in relation to adaptation to stress. In the brain, GR affects the hippocampus to modulate memory processes through direct binding to glucocorticoid response elements (GREs) in the DNA. However, its effects are to a high degree cell specific, and its target genes in different cell types as well as the mechanisms conferring this specificity are largely unknown. To gain insight in hippocampal GR signaling, we characterized to which GRE GR binds in the rat hippocampus. Using a position-specific scoring matrix, we identified evolutionary-conserved putative GREs from a microarray based set of hippocampal target genes. Using chromatin immunoprecipitation, we were able to confirm GR binding to 15 out of a selection of 32 predicted sites (47%). The majority of these 15 GREs are previously undescribed and thus represent novel GREs that bind GR and therefore may be functional in the rat hippocampus. GRE nucleotide composition was not predictive for binding of GR to a GRE. A search for conserved flanking sequences that may predict GR-GRE interaction resulted in the identification of GC-box associated motifs, such as Myc-associated zinc finger protein 1, within 2 kb of GREs with GR binding in the hippocampus. This enrichment was not present around nonbinding GRE sequences nor around proven GR-binding sites from a mesenchymal stem-like cell dataset that we analyzed. GC-binding transcription factors therefore may be unique partners for DNA-bound GR and may in part explain cell-specific transcriptional regulation by glucocorticoids in the context of the hippocampus.

  18. Savannah River Site's Site Specific Plan

    SciTech Connect

    Not Available

    1991-08-01

    This Site Specific Plan (SSP) has been prepared by the Savannah River Site (SRS) in order to show the Environmental Restoration and Waste Management activities that were identified during the preparation of the Department of Energy-Headquarters (DOE-HQ) Environmental Restoration and Waste Management Five-Year Plan (FYP) for FY 1992--1996. The SSP has been prepared in accordance with guidance received from DOE-HQ. DOE-SR is accountable to DOE-HQ for the implementation of this plan. The purpose of the SSP is to develop a baseline for policy, budget, and schedules for the DOE Environmental Restoration and Waste Management activities. The plan explains accomplishments since the Fiscal Year (FY) 1990 plan, demonstrates how present and future activities are prioritized, identifies currently funded activities and activities that are planned to be funded in the upcoming fiscal year, and describes future activities that SRS is considering.

  19. Preliminary Site Characterization Report, Rulsion Site, Colorado

    SciTech Connect

    1996-08-01

    This report is a summary of environmental information gathered during a review of the documents pertaining to Project Rulison and interviews with personnel who worked on the project. Project Rulison was part of Operation Plowshare (a program designed to explore peaceful uses for nuclear devices). The project consisted of detonating a 43-kiloton nuclear device on September 10, 1969, in western Colorado to stimulate natural gas production. Following the detonation, a reentry well was drilled and several gas production tests were conducted. The reentry well was shut-in after the last gas production test and was held in standby condition until the general cleanup was undertaken in 1972. A final cleanup was conducted after the emplacement and testing wells were plugged in 1976. However, some surface radiologic contamination resulted from decontamination of the drilling equipment and fallout from the gas flaring during drilling operations. With the exception of the drilling effluent pond, all surface contamination at the Rulison Site was removed during the cleanup operations. All mudpits and other excavations were backfilled, and both upper and lower drilling pads were leveled and dressed. This report provides information regarding known or suspected areas of contamination, previous cleanup activities, analytical results, a review of the regulatory status, the site`s physical environment, and future recommendations for Project Ruhson. Based on this research, several potential areas of contamination have been identified. These include the drilling effluent pond and mudpits used during drilling operations. In addition, contamination could migrate in the gas horizon.

  20. Identification of sites within the Palo Duro Basin. Volume 1. Palo Duro Location A. [Contains glossary, Deaf Smith site

    SciTech Connect

    Not Available

    1984-11-01

    This three-volume document narrows to two sites for continued investigations for potential nuclear waste repository sites in the Palo Duro Basin of the Texas Panhandle. Volume 1 narrows a site previously identified in Deaf Smith County, Texas; Volume 2 narrows a site previously identified in Swisher County, Texas; and Volume 3 contains responses to comments received regarding the drafts of Volumes 1 and 2 (BMI/ONWI-531). These volumes discuss the methodology and logic used as well as the results that narrowed these sites. Each of the 10 site performance criteria was divided into descriptors related to site performance characteristics. Each descriptor was evaluated by a systematic logic to determine if it could be used as a discriminator. Then more- and less-preferred areas for groups of discriminators were defined and composite maps were prepared and evaluated to identify the sites.

  1. Site characterization handbook

    SciTech Connect

    Not Available

    1988-06-01

    This Handbook discusses both management and technical elements that should be considered in developing a comprehensive site characterization program. Management elements typical of any project of a comparable magnitude and complexity are combined with a discussion of strategies specific to site characterization. Information specific to the technical elements involved in site characterization is based on guidance published by the Nuclear Regulatory Commission (NRC) with respect to licensing requirements for LLW disposal facilities. The objective of this Handbook is to provide a reference for both NRC Agreement States and non-Agreement States for use in developing a comprehensive site characterization program that meets the specific objectives of the State and/or site developer/licensee. Each site characterization program will vary depending on the objectives, licensing requirements, schedules/budgets, physical characteristics of the site, proposed facility design, and the specific concerns raised by government agencies and the public. Therefore, the Handbook is not a prescriptive guide to site characterization. 18 refs., 6 figs.

  2. Tremont Field Site

    EPA Pesticide Factsheets

    Tremont Field Site is a 41.5-acre public park located northeast of the intersection of West 11th Street and Clark Avenue in Cleveland, Ohio. Through two deed transfers in 1948 and 1949, the City acquired the site from the United States Government.

  3. Plugged-in SITE.

    ERIC Educational Resources Information Center

    Phillips, Rhys

    2003-01-01

    Examines form, color, and technology at the University of Ottawa's School of Information Technology and Engineering (SITE) building, focusing on systems (e.g., SITE is a data wired building, but with no expensive raised floors or cheap dropped ceilings); assembly rather than construction (replacing standard notions of construction with the process…

  4. SAMPLING OF CONTAMINATED SITES

    EPA Science Inventory

    A critical aspect of characterization of the amount and species of contamination of a hazardous waste site is the sampling plan developed for that site. f the sampling plan is not thoroughly conceptualized before sampling takes place, then certain critical aspects of the limits o...

  5. Commercial Web Site Links.

    ERIC Educational Resources Information Center

    Thelwall, Mike

    2001-01-01

    Discusses business use of the Web and related search engine design issues as well as research on general and academic links before reporting on a survey of the links published by a collection of business Web sites. Results indicate around 66% of Web sites do carry external links, most of which are targeted at a specific purpose, but about 17%…

  6. The Iowa Validation Site

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Remote sensing can be used to observe the land surface hydrologic cycle, but the quantitative aspects of these observations are not well known. We present a small (1 km^2) experimental validation site, the Iowa Validation Site. Initially we have focused on validating remotely-sensed observations of ...

  7. Site Planning and Layout.

    ERIC Educational Resources Information Center

    Moore, Gary T.

    1998-01-01

    Examines five issues related to child care facility design: (1) siting the building, outdoor play, and service areas; (2) creating favorable microclimates; (3) developmentally appropriate play yards; (4) pedestrian access and site circulation; and (5) vehicular access and parking away from pedestrians and play. (KB)

  8. Sites of the Holocaust.

    ERIC Educational Resources Information Center

    McCleary, George F., Jr.

    1995-01-01

    Presents a map of Europe identifying the location of major concentration camps, extermination camps, and massacre sites during World War II. Maintains that only a few of the over 400 sites in the former Soviet Union where entire Jewish villages were exterminated are shown. (CFR)

  9. WWW: Neuroscience Web Sites

    ERIC Educational Resources Information Center

    Liu, Dennis

    2006-01-01

    The human brain contains an estimated 100 billion neurons, and browsing the Web, one might be led to believe that there's a Web site for every one of those cells. It's no surprise that there are lots of Web sites concerning the nervous system. After all, the human brain is toward the top of nearly everyone's list of favorite organs and of…

  10. Site decommissioning management plan

    SciTech Connect

    Fauver, D.N.; Austin, J.H.; Johnson, T.C.; Weber, M.F.; Cardile, F.P.; Martin, D.E.; Caniano, R.J.; Kinneman, J.D.

    1993-10-01

    The Nuclear Regulatory Commission (NRC) staff has identified 48 sites contaminated with radioactive material that require special attention to ensure timely decommissioning. While none of these sites represent an immediate threat to public health and safety they have contamination that exceeds existing NRC criteria for unrestricted use. All of these sites require some degree of remediation, and several involve regulatory issues that must be addressed by the Commission before they can be released for unrestricted use and the applicable licenses terminated. This report contains the NRC staff`s strategy for addressing the technical, legal, and policy issues affecting the timely decommissioning of the 48 sites and describes the status of decommissioning activities at the sites.

  11. Site directed recombination

    DOEpatents

    Jurka, Jerzy W.

    1997-01-01

    Enhanced homologous recombination is obtained by employing a consensus sequence which has been found to be associated with integration of repeat sequences, such as Alu and ID. The consensus sequence or sequence having a single transition mutation determines one site of a double break which allows for high efficiency of integration at the site. By introducing single or double stranded DNA having the consensus sequence flanking region joined to a sequence of interest, one can reproducibly direct integration of the sequence of interest at one or a limited number of sites. In this way, specific sites can be identified and homologous recombination achieved at the site by employing a second flanking sequence associated with a sequence proximal to the 3'-nick.

  12. Composite foams

    DOEpatents

    Williams, Jr., Joel M.; Nyitray, Alice M.; Wilkerson, Mark H.

    1991-01-01

    Composite foams are provided comprising a first rigid, microcellular, open-celled organic polymer foam having a density of from about 0.015 g/cm.sup.3 to about 0.20 g/cm.sup.3 and a pore size of from about 1 micron to about 30 microns, said first foam containing a second polymer having a density of from about 0.015 g/cm.sup.3 to about 0.20 g/cm.sup.3 or a second polymer foam having a density of from about 0.015 g/cm.sup.3 to about 0.20 g/cm.sup.3 and a pore size of from about 0.01 microns to about 1.0 micron within the open cells of said first foam.

  13. Composite foams

    DOEpatents

    Williams, Jr., Joel M.; Nyitray, Alice M.; Wilkerson, Mark H.

    1990-01-01

    Composite foams are provided comprising a first rigid, microcellular, open-celled organic polymer foam having a density of from about 0.015 g/cm.sup.3 to about 0.20 g/cm.sup.3 and a pore size of from about 1 micron to about 30 microns, said first foam containing a second polymer having a density of from about 0.015 g/cm.sup.3 to about 0.20 g/cm.sup.3 or a second polymer foam having a density of from about 0.015 g/cm.sup.3 to about 0.20 g/cm.sup.3 and a pore size of from about 0.01 microns to about 1.0 micron within the open cells of said first foam.

  14. Lunar Polar Landing Sites

    NASA Astrophysics Data System (ADS)

    Kamps, Oscar; Foing, Bernard H.; Flahaut, Jessica

    2016-07-01

    An important step for a scientific mission is to assess on where the mission should be conducted. This study on landing site selection focuses on a mission to the poles of the Moon where an in-situ mission should be conducted to answer the questions with respect to volatiles and ices. The European interest for a mission to the poles of the Moon is presented in the mission concept called Heracles. This mission would be a tele-operated, sample return mission where astronauts will controlling a rover from an Orion capsule in cislunar orbit. The primary selection of landing sites was based on the scientific interest of areas near the poles. The maximum temperature map from Diviner was used to select sites where CO^2¬ should always be stable. This means that the maximum temperature is lower than 54K which is the sublimation temperature for CO^2¬ in lunar atmospheric pressure. Around these areas 14 potential regions of interest were selected. Further selection was based on the epoch of the surface in these regions of interest. It was thought that it would be of high scientific value if sites are sampled which have another epoch than already sampled by one of the Apollo or Luna missions. Only 6 sites on both North as South Pole could contain stable CO^2 ¬and were older than (Pre-)Necterian. Before a landing site and rover traverse was planned these six sites were compared on their accessibility of the areas which could contain stable CO^2. It was assumed that slope lower than 20^o is doable to rove. Eventually Amundsen and Rozhdestvenskiy West were selected as regions of interest. Assumptions for selecting landing sites was that area should have a slope lower than 5^o, a diameter of 1km, in partial illuminated area, and should not be isolated but inside an area which is in previous steps marked as accessible area to rove. By using multiple tools in ArcGIS it is possible to present the area's which were marked as potential landing sites. The closest potential landing

  15. Lubricant composition

    SciTech Connect

    Baile, G.H.

    1980-12-16

    Lubricating compositions and shaped articles composed thereof are described which consist essentially of about 30 to about 60% by weight of an oil of lubricating viscosity, about 20 to about 50% by weight of a high molecular weight polymer, and about 20 about 50% by weight of a heat conductive agent capable of conducting heat away from a bearing surface where it is generated. The high molecular weight polymer may, for example, be polyethylene, having average molecular weights in the range from about 1.0 X 105 to about 5.0 X 106. The oil may be a mineral oil, a diester oil or preferably a synthetic hydrocarbon oil having a viscosity in the range from about 13 to about 1200 mm''/s (Mm2/s) at 38/sup 0/C. (100/sup 0/F.) the heat conductive agent may be powdered zinc oxide, aluminum powder, or equivalents thereof in this invention. The compositions are semi-rigid gels which may be formed in a mold and used as is, or which may be shaped further after molding. The gels are formed by blending the heat conductive agent and polymer and then blending that mixture with the oil and heating to a temperature above the softening temperature of the polymer for a period of time (About 5 to about 75 minutes) sufficient that the mixture will form a firm, tough solid gel on cooling having an oily surface provided by oil exuding from the gel thus producing a lubricative mass operable for extended periods of time. The heat conductive substance dispersed in the gel aids in dissipating heat produced at the bearing surfaces during use thus improving the performance of the gel both in withstanding higher bulk operating temperatures and in resisting breakdown of the gel under prolonged use.

  16. Ecosystem studies at the Los Medanos site, Eddy County, New Mexico. Volume I

    SciTech Connect

    Hart, J.S.

    1981-05-01

    This report summarizes the results of biological studies conducted during 1980 at the Los Medanos site in southeastern New Mexico. The studies include: (1) densities and species composition of the avifauna of the Los Medanos site; (2) aquatic ecosystems of the lower Pecos drainage; (3) floristic studies at the Los Medanos site; (4) plant successional, grazing, trampling, and salt studies on the Los Medanos site; (5) soil and vegetation studies at the Los Medanos site; (6) arthropod and decomposition studies at the WIPP site; (7) amphibians, reptiles and mammals at the Los Medanos site; (8) vertebrate ecology at the Los Medanos site; and (9) statistical analysis and data management. 7 refs. (ACR)

  17. Master Plans for Park Sites.

    ERIC Educational Resources Information Center

    Van Meter, Jerry R.

    This booklet is a general guide to park site planning. The four basic steps involved in developing a park site are a) determination of the uses of the site, b) analysis of the site potential for these uses, c) identification of the functional relationship among the uses, and d) coordination of the uses to the park sites. Uses of park sites are…

  18. Retroviral integration: Site matters

    PubMed Central

    Demeulemeester, Jonas; De Rijck, Jan

    2015-01-01

    Here, we review genomic target site selection during retroviral integration as a multistep process in which specific biases are introduced at each level. The first asymmetries are introduced when the virus takes a specific route into the nucleus. Next, by co‐opting distinct host cofactors, the integration machinery is guided to particular chromatin contexts. As the viral integrase captures a local target nucleosome, specific contacts introduce fine‐grained biases in the integration site distribution. In vivo, the established population of proviruses is subject to both positive and negative selection, thereby continuously reshaping the integration site distribution. By affecting stochastic proviral expression as well as the mutagenic potential of the virus, integration site choice may be an inherent part of the evolutionary strategies used by different retroviruses to maximise reproductive success. PMID:26293289

  19. Siting Air Monitoring Stations

    ERIC Educational Resources Information Center

    Ludwig, F. L.

    1978-01-01

    Describes guidelines for consideration in selecting sites for air monitoring systems. Careful selection for spatial scale and specific sources assures that the collected data are accurately representing the situation. (Author/MA)

  20. Programming for SITE.

    ERIC Educational Resources Information Center

    Mody, Bella

    1979-01-01

    Describes the Satellite Instructional Television Experiment (SITE) project in India during 1975-76, including programing patterns, formats, and audiences. Demonstrates that countries like India have the technical and managerial capability to design, operate, and maintain advanced communication technology. (JMF)

  1. Solar site test module

    NASA Technical Reports Server (NTRS)

    Kissel, R. R.; Scott, D. R.

    1980-01-01

    A solar site test module using the Rockwell AIM 65microcomputer is described. The module is designed to work at any site where an IBM site data acquisition system (SDAS) is installed and is intended primarily as a troubleshooting tool. It collects sensor information (temperatures, flow rates, etc.) and displays or prints it immediately in calibrated engineering units. It will read one sensor on demand, periodically read up to 10sensors or periodically read all sensors. Performance calculations can also be included with sensor data. Unattended operation is possible to, e.g., monitor a group of sensors once per hour. Work is underway to add a data acquisition system to the test module so that it can be used at sites which have no SDAS.

  2. Fatigue of composites

    NASA Technical Reports Server (NTRS)

    Salkind, M. J.

    1972-01-01

    The failure mechanisms in the fatigue of composite materials are analyzed in terms of the requirements for designing fatigue-critical composite structures. Fiber reinforced polymers, fiber reinforced metals, fatigue of composite structures, and composite design considerations are discussed. It is concluded that composite materials offer the engineer the opportunity for tailoring stiffness in different directions for designing dynamic components.

  3. Estimating Absolute Site Effects

    SciTech Connect

    Malagnini, L; Mayeda, K M; Akinci, A; Bragato, P L

    2004-07-15

    The authors use previously determined direct-wave attenuation functions as well as stable, coda-derived source excitation spectra to isolate the absolute S-wave site effect for the horizontal and vertical components of weak ground motion. They used selected stations in the seismic network of the eastern Alps, and find the following: (1) all ''hard rock'' sites exhibited deamplification phenomena due to absorption at frequencies ranging between 0.5 and 12 Hz (the available bandwidth), on both the horizontal and vertical components; (2) ''hard rock'' site transfer functions showed large variability at high-frequency; (3) vertical-motion site transfer functions show strong frequency-dependence, and (4) H/V spectral ratios do not reproduce the characteristics of the true horizontal site transfer functions; (5) traditional, relative site terms obtained by using reference ''rock sites'' can be misleading in inferring the behaviors of true site transfer functions, since most rock sites have non-flat responses due to shallow heterogeneities resulting from varying degrees of weathering. They also use their stable source spectra to estimate total radiated seismic energy and compare against previous results. they find that the earthquakes in this region exhibit non-constant dynamic stress drop scaling which gives further support for a fundamental difference in rupture dynamics between small and large earthquakes. To correct the vertical and horizontal S-wave spectra for attenuation, they used detailed regional attenuation functions derived by Malagnini et al. (2002) who determined frequency-dependent geometrical spreading and Q for the region. These corrections account for the gross path effects (i.e., all distance-dependent effects), although the source and site effects are still present in the distance-corrected spectra. The main goal of this study is to isolate the absolute site effect (as a function of frequency) by removing the source spectrum (moment-rate spectrum) from

  4. Antiferromagnetic interaction between A'-site Mn spins in A-site-ordered perovskite YMn3Al4O12.

    PubMed

    Tohyama, Takenori; Saito, Takashi; Mizumaki, Masaichiro; Agui, Akane; Shimakawa, Yuichi

    2010-03-01

    The A-site-ordered perovskite YMn(3)Al(4)O(12) was prepared by high-pressure synthesis. Structural analysis with synchrotron powder X-ray diffraction data and the Mn L-edges X-ray absorption spectrum revealed that the compound has a chemical composition Y(3+)Mn(3+)(3)Al(3+)(4)O(2-)(12) with magnetic Mn(3+) at the A' site and non-magnetic Al(3+) at the B site. An antiferromagnetic interaction between the A'-site Mn(3+) spins is induced by the nearest neighboring Mn-Mn direct exchange interaction and causes an antiferromagnetic transition at 34.3 K.

  5. Site clearance working group

    SciTech Connect

    1997-03-01

    The Gulf of Mexico and Louisiana continue to be areas with a high level of facility removal, and the pace of removal is projected to increase. Regulations were promulgated for the Gulf of Mexico and Louisiana requiring that abandoned sites be cleared of debris that could interfere with fishing and shrimping activities. The site clearance regulations also required verification that the sites were clear. Additionally, government programs were established to compensate fishermen for losses associated with snagging their equipment on oil and gas related objects that remained on the water bottoms in areas other than active producing sites and sites that had been verified as clear of obstructions and snags. The oil and gas industry funds the compensation programs. This paper reviews the regulations and evolving operating practices in the Gulf of Mexico and Louisiana where site clearance and fisherman`s gear compensation regulations have been in place for a number of years. Although regulations and guidelines may be in place elsewhere in the world, this paper focuses on the Gulf of Mexico and Louisiana. Workshop participants are encouraged to bring up international issues during the course of the workshop. Additionally, this paper raises questions and focuses on issues that are of concern to the various Gulf of Mexico and Louisiana water surface and water bottom stakeholders. This paper does not have answers to the questions or issues. During the workshop participants will debate the questions and issues in an attempt to develop consensus opinions and/or make suggestions that can be provided to the appropriate organizations, both private and government, for possible future research or policy adjustments. Site clearance and facility removal are different activities. Facility removal deals with removal of the structures used to produce oil and gas including platforms, wells, casing, piles, pipelines, well protection structures, etc.

  6. Dynamic response and acoustic fatigue of stiffened composite structure

    NASA Technical Reports Server (NTRS)

    Soovere, J.

    1984-01-01

    The results of acoustic fatigue and dynamic response tests performed on L-1011 graphite-epoxy (GrE) aileron and panel components are reported. The aileron featured glass microballoons between the GrE skins. Tests yielded random fatigue data from double and single cantilever coupons and modal data from impedance hammer and loudspeaker impulses. Numerical and sample test data were obtained on combined acoustic and shear loads, acoustic and thermal loads, random fatigue and damping of the integrally stiffened and secondary bonded panels. The fatigue data indicate a fatigue life beyond 10 million cycles. The acoustic data suggested that noise transmission could be enhanced in the integrally stiffened panels, which were more acoustic-fatigue resistant than were the secondary bonded panels.

  7. Hanford Site Secondary Waste Roadmap

    SciTech Connect

    Westsik, Joseph H.

    2009-01-29

    Summary The U.S. Department of Energy (DOE) is making plans to dispose of 54 million gallons of radioactive tank wastes at the Hanford Site near Richland, Washington. The high-level wastes and low-activity wastes will be vitrified and placed in permanent disposal sites. Processing of the tank wastes will generate secondary wastes, including routine solid wastes and liquid process effluents, and these need to be processed and disposed of also. The Department of Energy Office of Waste Processing sponsored a meeting to develop a roadmap to outline the steps necessary to design the secondary waste forms. Representatives from DOE, the U.S. Environmental Protection Agency, the Washington State Department of Ecology, the Oregon Department of Energy, Nuclear Regulatory Commission, technical experts from the DOE national laboratories, academia, and private consultants convened in Richland, Washington, during the week of July 21-23, 2008, to participate in a workshop to identify the risks and uncertainties associated with the treatment and disposal of the secondary wastes and to develop a roadmap for addressing those risks and uncertainties. This report describes the results of the roadmap meeting in Richland. Processing of the tank wastes will generate secondary wastes, including routine solid wastes and liquid process effluents. The secondary waste roadmap workshop focused on the waste streams that contained the largest fractions of the 129I and 99Tc that the Integrated Disposal Facility risk assessment analyses were showing to have the largest contribution to the estimated IDF disposal impacts to groundwater. Thus, the roadmapping effort was to focus on the scrubber/off-gas treatment liquids with 99Tc to be sent to the Effluent Treatment Facility for treatment and solidification and the silver mordenite and carbon beds with the captured 129I to be packaged and sent to the IDF. At the highest level, the secondary waste roadmap includes elements addressing regulatory and

  8. Processing composite materials

    NASA Technical Reports Server (NTRS)

    Baucom, R. M.

    1982-01-01

    The fabrication of several composite structural articles including DC-10 upper aft rudders, L-1011 vertical fins and composite biomedical appliances are discussed. Innovative composite processing methods are included.

  9. SLAC site design aesthetics

    SciTech Connect

    Hall, F.F.

    1985-10-01

    Stanford Linear Accelerator Center (SLAC) is a single mission laboratory dedicated to basic research in high energy particle physics. SLAC site also houses Stanford Synchrotron Radiation Laboratory (SSRL) which is a multi-mission laboratory for research using beams of ultraviolet light and low energy photons as emitted tangentially from SLAC colliding beam facilities. This paper discusses various aspects of SLAC site design aesthetics under the following headings: (1) imposed footprint of SLAC, (2) description of selected site, (3) use of earth cover for radiation and sight screens, (4) use of landscaping for cosmetic purposes, (5) use of exterior paint colors to soften SLAC impact on neighbors, (6) relocation of SLAC main entrance, (7) relocation of SLAC collider arcs and experimental hall, (8) parking lots and storage yards, and (9) land use zoning at SLAC.

  10. Site investigation for Magnus

    SciTech Connect

    Semple, R.M.; Rigden, W.J.

    1983-05-01

    In April 1982, BP's Magnus structure was installed about 150 km northeast of the Shetland Islands. The most northerly, deepest water platform in the North Sea, the steel tower is supported on groups of 2 m diameter piles that were driven, in good accordance with predictions, to an average penetration of 85 m in strong cohesive soils. The paper describes investigations performed at the platform site, and documents soil characteristics for conventional and state of the art pile analyses. Reference is made to several innovative techniques first used at the Magnus site that have since been incorporated into the larger North Sea investigations. Information is given about the geological history of the site. Test results are presented on soil strength and stiffness, including critical state soil mechanics parameters, on residual pore pressures after sampling, and on the effect of sample size on strength characteristics.

  11. YUCCA MOUNTAIN SITE DESCRIPTION

    SciTech Connect

    A.M. Simmons

    2004-04-16

    The ''Yucca Mountain Site Description'' summarizes, in a single document, the current state of knowledge and understanding of the natural system at Yucca Mountain. It describes the geology; geochemistry; past, present, and projected future climate; regional hydrologic system; and flow and transport within the unsaturated and saturated zones at the site. In addition, it discusses factors affecting radionuclide transport, the effect of thermal loading on the natural system, and tectonic hazards. The ''Yucca Mountain Site Description'' is broad in nature. It summarizes investigations carried out as part of the Yucca Mountain Project since 1988, but it also includes work done at the site in earlier years, as well as studies performed by others. The document has been prepared under the Office of Civilian Radioactive Waste Management quality assurance program for the Yucca Mountain Project. Yucca Mountain is located in Nye County in southern Nevada. The site lies in the north-central part of the Basin and Range physiographic province, within the northernmost subprovince commonly referred to as the Great Basin. The basin and range physiography reflects the extensional tectonic regime that has affected the region during the middle and late Cenozoic Era. Yucca Mountain was initially selected for characterization, in part, because of its thick unsaturated zone, its arid to semiarid climate, and the existence of a rock type that would support excavation of stable openings. In 1987, the United States Congress directed that Yucca Mountain be the only site characterized to evaluate its suitability for development of a geologic repository for high-level radioactive waste and spent nuclear fuel.

  12. Waste Site Mapping

    NASA Technical Reports Server (NTRS)

    1994-01-01

    Old aircraft considered not restorable are melted down in on-site furnaces to reclaim the aluminum in their airframes. The process produces aluminum ingots and leaves a residue known as "dross." Because dross contains contaminants like lead silver cadmium and copper, Pima County, the dross dumping site, wanted to locate areas where dross had been dumped. Dr. Larry Lepley and Sandra L. Perry used the Landsat Thematic Mapper to screen for dross. A special two-step procedure was developed to separate the dross dumps (typically no larger than 50 meters across) from the desert background. The project has opened the door for similar applications.

  13. Composite technology for total hip arthroplasty.

    PubMed

    Skinner, H B

    1988-10-01

    Composite materials, which can be very strong while having a low modulus of elasticity, are being studied because such materials have potential to be made into isoelastic hip prostheses. Composites intended for medical applications incorporate carbon or polyamide as a fiber component, while polysulfone, polyetheretherketone, or polyethylene is used as a matrix component. Mechanical properties (especially the modulus of elasticity) are emphasized because of the desire to match those properties of the proximal femur. Many of the variables that affect the mechanical properties of these materials are explained. The application of stress to different fiber orientations demonstrates the mechanical properties of the composite, and this is proved mathematically. It is shown that in composites with fibers oriented in the same direction, the modulus of elasticity in the direction of the fibers generally approaches that of the fibers as the amount of matrix decreases. Perpendicular to the fibers, the modulus of elasticity of the composite is only slightly greater than that of the matrix material. For isotropic chopped-fiber composites, the modulus of elasticity approaches that of the matrix as the fiber content decreases; at high-fiber content, the modulus is significantly less than that of oriented long-fiber composites. In general, the modulus of elasticity and fiber content have a linear relationship. Composites have fatigue properties that vary with direction and approach ultimate strength in tension but are lower in compression. The fatigue properties of proposed composites are discussed. Abrasion as a cause of stress concentration sites and wear particles is considered.

  14. statement of significance, location map, site plan, landscape plan, site ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    statement of significance, location map, site plan, landscape plan, site sections, evolution of cemetery landscape. - San Francisco National Cemetery, 1 Lincoln Boulevard, San Francisco, San Francisco County, CA

  15. List 9 - Active CERCLIS Sites:

    EPA Pesticide Factsheets

    The List 9 displays the sequence of activities undertaken at active CERCLIS sites. An active site is one at which site assessment, removal, remedial, enforcement, cost recovery, or oversight activities are being planned or conducted.

  16. Science. [SITE 2001 Section].

    ERIC Educational Resources Information Center

    Roach, Linda E., Ed.

    This document contains the following papers on science from the SITE (Society for Information Technology & Teacher Education) 2001 conference: (1) "Using a Computer Simulation before Dissection To Help Students Learn Anatomy" (Joseph Paul Akpan and Thomas Andre); (2) "EARTH2CLASS: A Unique Workshop/On-Line/Distance-Learning…

  17. Savannah River Site Robotics

    SciTech Connect

    2010-01-01

    Meet Sandmantis and Frankie, two advanced robotic devices that are key to cleanup at Savannah River Site. Sandmantis cleans hard, residual waste off huge underground storage tanks. Frankie is equipped with unique satellite capabilities and sensing abilties that can determine what chemicals still reside in the tanks in a cost effective manner.

  18. SITE EMERGING TECHNOLOGY Program

    EPA Science Inventory

    This document is intended as a reference guide for EPA Regional decision makers and others interested in tchnologies in the SITE Demonstration and Technologies programs. The Technologies are described in technology profiles presented in alphabetical order by developer name and se...

  19. Savannah River Site Robotics

    ScienceCinema

    None

    2016-07-12

    Meet Sandmantis and Frankie, two advanced robotic devices that are key to cleanup at Savannah River Site. Sandmantis cleans hard, residual waste off huge underground storage tanks. Frankie is equipped with unique satellite capabilities and sensing abilties that can determine what chemicals still reside in the tanks in a cost effective manner.

  20. Mathematics. [SITE 2001 Section].

    ERIC Educational Resources Information Center

    Connell, Michael L., Ed.; Lowery, Norene Vail, Ed.; Harnisch, Delwyn L., Ed.

    This document contains the following papers on mathematics from the SITE (Society for Information Technology & Teacher Education) 2001 conference: "Secondary Mathematics Methods Course with Technology Units: Encouraging Pre-Service Teachers To Use Technology" (Rajee Amarasinghe); "Competency Exams in College Mathematics"…

  1. Mathematics. [SITE 2002 Section].

    ERIC Educational Resources Information Center

    Connell, Michael L., Ed.; Lowery, Norene Vail, Ed.; Harnisch, Delwyn L., Ed.

    This document contains the following papers on mathematics from the SITE (Society for Information Technology & Teacher Education) 2002 conference: (1) "Teachers' Learning of Mathematics in the Presence of Technology: Participatory Cognitive Apprenticeship" (Mara Alagic); (2) "A Fractal Is a Pattern in Your Neighborhood" (Craig N. Bach); (3)…

  2. Proposed Drill Sites

    DOE Data Explorer

    Lane, Michael

    2013-06-28

    Proposed drill sites for intermediate depth temperature gradient holes and/or deep resource confirmation wells. Temperature gradient contours based on shallow TG program and faults interpreted from seismic reflection survey are shown, as are two faults interpreted by seismic contractor Optim but not by Oski Energy, LLC.

  3. Science. [SITE 2002 Section].

    ERIC Educational Resources Information Center

    Roach, Linda Easley, Ed.

    This document contains the following papers on science from the SITE (Society for Information Technology & Teacher Education) 2002 conference: (1) "Color & Light: Design and Evaluation of a Multimedia-Case for Elementary Teacher-Education" (Peter Blijleven and Ellen van den Berg); (2) "Standards-Based Design of Technology-Integrated Science…

  4. Research. [SITE 2001 Section].

    ERIC Educational Resources Information Center

    McAlister, Kim, Ed.; Curtis, Reagan, Ed.

    This document contains the papers on research from the SITE (Society for Information Technology & Teacher Education) 2001 conference. Topics covered include: concerns of administrators and teachers in the diffusion of information technology; preservice elementary mathematics teachers' computer self efficacy, attitudes, and perceptions;…

  5. Theory. [SITE 2002 Section].

    ERIC Educational Resources Information Center

    Christensen, Paula, Ed.

    This document contains the following papers on theory from the SITE (Society for Information Technology & Teacher Education) 2002 conference: (1) "The Emerging Ecological Contribution of Online Resources and Tools to K-12 Classrooms" (Therese Laferriere, Robert Bracewell, Alain Breuleux); (2) "Pedagogical Ethnotechnography: A Bifocal Lens To…

  6. International. [SITE 2002 Section].

    ERIC Educational Resources Information Center

    Willis, Dee Anna, Ed.

    This document contains the following papers on international issues from the SITE (Society for Information Technology & Teacher Education) 2002 conference: (1) "The Management of Technological Change within Faculties in International American Schools" (Martine Audeoud); (2) "Going Global: Using a Website Development Project To…

  7. 2014 Site Environmental Report

    SciTech Connect

    Paquette, Douglas; Remien, Jason; Foley, Brian; Burke, John; Dorsch, William; Ratel, Karen; Howe, Robert; Welty, Tim; Williams, Jeffrey; Pohlpt, Peter; Lagattolla, Richard; Metz, Robert; Milligan, James; Lettieri, Lawrence

    2015-10-01

    BNL prepares an annual Site Environmental Report (SER) in accordance with DOE Order 231.1B, Environment, Safety and Health Reporting. The report is written to inform the public, regulators, employees, and other stakeholders of the Laboratory’s environmental performance during the calendar year in review.

  8. International. [SITE 2001 Section].

    ERIC Educational Resources Information Center

    Willis, Dee Anna, Ed.

    This document contains the following papers on international issues from the SITE (Society for Information Technology & Teacher Education) 2001 conference: (1) "Attitudes of Malaysian Vocational Trainee Teachers towards the Integration of Computer in Teaching" (Ab. Rahim Bakar and Shamsiah Mohamed); (2) "Views from an Asian…

  9. Simulation. [SITE 2001 Section].

    ERIC Educational Resources Information Center

    Seymour, Cathy R., Ed.

    This document contains three papers on simulation from the SITE (Society for Information Technology & Teacher Education) 2001 conference. "Simulations in the Learning Cycle: A Case Study Involving 'Exploring the Nardoo'" (William M. Dwyer and Valesca E. Lopez) presents a study of middle school students using a CD-based simulation…

  10. Elementary Classroom Web Sites

    ERIC Educational Resources Information Center

    Baker, Elizabeth A.

    2007-01-01

    The purpose of this study was to understand how elementary classroom Web sites support children's literacy. From a sociocultural perspective of literacy and a transformative stance toward the integration of literacy and technology, and building on explorations of new literacies, I discuss opportunities provided by the Internet that can support…

  11. Small Wind Site Assessment Guidelines

    SciTech Connect

    Olsen, Tim; Preus, Robert

    2015-09-01

    Site assessment for small wind energy systems is one of the key factors in the successful installation, operation, and performance of a small wind turbine. A proper site assessment is a difficult process that includes wind resource assessment and the evaluation of site characteristics. These guidelines address many of the relevant parts of a site assessment with an emphasis on wind resource assessment, using methods other than on-site data collection and creating a small wind site assessment report.

  12. Large boulders at landing site

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Large boulders are visible in this enlargement of pictures taken by the Imager for Mars Pathfinder (IMP) lander camera on July 4, 1997. The landing site is in the dry flood channel named Ares Valles. The boulders probably represent deposits from one of the catastrophic floods that carved the ancient channel. Between the rocks is brownish windblown soil. The gray-tan sky results from dust particles in the atmosphere.

    Pathfinder, a low-cost Discovery mission, is the first of a new fleet of spacecraft that are planned to explore Mars over the next ten years. Mars Global Surveyor, already en route, arrives at Mars on September 11 to begin a two year orbital reconnaissance of the planet's composition, topography, and climate. Additional orbiters and landers will follow every 26 months.

    Mars Pathfinder was developed and managed by the Jet Propulsion Laboratory (JPL) for NASA's Office of Space Science, Washington, D.C. JPL is an operating division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.

  13. Ambi-site substitution of Mn in lanthanum germanate apatites

    SciTech Connect

    Kendrick, E.; Knight, K.S.; Slater, P.R.

    2009-08-05

    A neutron diffraction study at 4 K of the Mn doped lanthanum germanate apatite-type oxide ion conductor of nominal starting composition 'La{sub 9.5}Mn{sub 0.5}(GeO{sub 4}){sub 6}O{sub 2.75}' is reported. The structure was refined in space group P6{sub 3}/m, although high thermal displacement parameters were observed for the oxide ion sites (particularly O3, and O4). Reduced thermal displacement parameters were obtained by splitting the O3 site, and allowing the O4 oxygen to move off site, which may indicate local regions of lower symmetry within the structure. In addition, the data suggested ambi-site substitution of Mn, with it being present on both the Ge site and the La site. Assuming no change in La:Mn:Ge ratio, a composition of La{sub 9.18}Mn{sub 0.28}(GeO{sub 4}){sub 5.8}(MnO{sub 4}){sub 0.2}O{sub 2} was determined. As such there are nominally no interstitial oxide ions, but rather cation vacancies on the La site. Therefore, the high conductivity for this sample is most likely related to the introduction of Frenkel-type defects at higher temperature, as previously proposed for other apatite-type systems containing vacancies on the La site.

  14. 7 CFR 2902.19 - Composite panels.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... composite panels. Engineered products designed for use as structural and sound deadening material suitable... information on the BioPreferred Web site of qualifying biobased products about the intended uses of the product, information on whether or not the product contains any recovered material, in addition...

  15. 7 CFR 2902.19 - Composite panels.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... composite panels. Engineered products designed for use as structural and sound deadening material suitable... information on the BioPreferred Web site of qualifying biobased products about the intended uses of the product, information on whether or not the product contains any recovered material, in addition...

  16. Reservoir High's TE Site Wins Web Site of the Month

    ERIC Educational Resources Information Center

    Tech Directions, 2008

    2008-01-01

    This article features "Mr. Rhine's Technology Education Web Site," a winner of the Web Site of the Month. This Web site was designed by Luke Rhine, a teacher at the Reservoir High School in Fulton, Maryland. Rhine's Web site offers course descriptions and syllabuses, class calendars, lectures and presentations, design briefs and other course…

  17. Intraply Hybrid Composite Design

    NASA Technical Reports Server (NTRS)

    Chamis, C. C.; Sinclair, J. H.

    1986-01-01

    Several theoretical approaches combined in program. Intraply hybrid composites investigated theoretically and experimentally at Lewis Research Center. Theories developed during investigations and corroborated by attendant experiments used to develop computer program identified as INHYD (Intraply Hybrid Composite Design). INHYD includes several composites micromechanics theories, intraply hybrid composite theories, and integrated hygrothermomechanical theory. Equations from theories used by program as appropriate for user's specific applications.

  18. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Loewy, R. G.; Wiberley, S. E.

    1985-01-01

    Various topics relating to composite structural materials for use in aircraft structures are discussed. The mechanical properties of high performance carbon fibers, carbon fiber-epoxy interface bonds, composite fractures, residual stress in high modulus and high strength carbon fibers, fatigue in composite materials, and the mechanical properties of polymeric matrix composite laminates are among the topics discussed.

  19. Probabilistic composite micromechanics

    NASA Technical Reports Server (NTRS)

    Stock, T. A.; Bellini, P. X.; Murthy, P. L. N.; Chamis, C. C.

    1988-01-01

    Probabilistic composite micromechanics methods are developed that simulate expected uncertainties in unidirectional fiber composite properties. These methods are in the form of computational procedures using Monte Carlo simulation. A graphite/epoxy unidirectional composite (ply) is studied to demonstrate fiber composite material properties at the micro level. Regression results are presented to show the relative correlation between predicted and response variables in the study.

  20. Composite Technology for Exploration

    NASA Technical Reports Server (NTRS)

    Fikes, John

    2017-01-01

    The CTE (Composite Technology for Exploration) Project will develop and demonstrate critical composites technologies with a focus on joints that utilize NASA expertise and capabilities. The project will advance composite technologies providing lightweight structures to support future NASA exploration missions. The CTE project will demonstrate weight-saving, performance-enhancing bonded joint technology for Space Launch System (SLS)-scale composite hardware.

  1. Conducting compositions of matter

    NASA Technical Reports Server (NTRS)

    Viswanathan, Tito (Inventor)

    2000-01-01

    The invention provides conductive compositions of matter, as well as methods for the preparation of the conductive compositions of matter, solutions comprising the conductive compositions of matter, and methods of preparing fibers or fabrics having improved anti-static properties employing the conductive compositions of matter.

  2. Conducting Compositions of Matter

    NASA Technical Reports Server (NTRS)

    Viswanathan, Tito (Inventor)

    1999-01-01

    The invention provides conductive compositions of matter, as well as methods for the preparation of the conductive compositions of matter, solutions comprising the conductive compositions of matter, and methods of preparing fibers or fabrics having improved anti-static properties employing the conductive compositions of matter.

  3. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Ansell, G. S.; Loewy, R. G.; Wiberley, S. E.

    1983-01-01

    Transverse properties of fiber constituents in composites, fatigue in composite materials, matrix dominated properties of high performance composites, numerical investigation of moisture effects, numerical investigation of the micromechanics of composite fracture, advanced analysis methods, compact lug design, and the RP-1 and RP-2 sailplanes projects are discussed.

  4. Composite Hemangioendothelioma of the Submandibular Region.

    PubMed

    Leen, Sarah Lam Shang; Clarke, Peter M; Chapman, John; Fisher, Cyril; Thway, Khin

    2015-12-01

    Composite hemangioendothelioma (HE) is a rare vascular neoplasm of intermediate malignant potential that predominantly occurs within the dermis or subcutis of the extremities, and occurs in a wide age range. It is locally aggressive with a high rate of local recurrence, and more rarely regional lymph node or distant metastasis. Histologically, it is composed of a complex admixture of benign, intermediate and malignant vascular components. Although composite HE may contain angiosarcoma-like areas, its prognosis is better than that of pure angiosarcoma. We describe a case of composite HE presenting as a submandibular mass in a 43 year-old male, which included areas of prominent 'high grade' epithelioid angiosarcoma. This adds to the range of anatomic sites of these neoplasms, highlights the importance of recognition of the head and neck as a potential site, and emphasizes the importance of accurate diagnosis for correct management (including of long term follow up) and prognostication.

  5. [Surgical site infections].

    PubMed

    Sganga, Gabriele

    2014-01-01

    Surgical site infections (SSIs) are recognized as a common surgical complication, occurring in about 2-5% of all surgical procedures. SSIs represent the third most frequent nosocomial infection, accounting for 14-16% of all infections observed in hospitalized patients and up to 38% of those observed among surgical patients. Knowledge of incidence, epidemiology, classification, process of wound healing, and pathogenesis of surgical site infection is of great importance. Given the high economic burden that infections provoke, beyond the increased morbidity and mortality, it appears mandatory to improve our tools in order to reduce their incidence, as a reduction of only 0.1% can result in a considerable saving of economic resources to be allocated to other activities, such as screening and prevention programs.

  6. A PROBABILITY SURVEY OF SUCCESSIONAL FOREST COMPOSITION AND CONDITION IN A GREAT RIVER FLOODPLAIN LANDSCAPE

    EPA Science Inventory

    Floodplains within the Great River Ecosystems (GREs) of the central U.S. are composed of dynamic mosaics of successional habitat that (when unmodified) are typically dominated by cottonwood forest (Populus ssp.). GRE riparian habitat condition and successional dynamics are linked...

  7. Site environmental report: 1993

    SciTech Connect

    Not Available

    1994-10-01

    The Inhalation Toxicology Research Institute (ITRI) has in place an extensive radiological and nonradiological environmental monitoring program which monitors air emissions, groundwater, soil, and ambient air around the facility. ITRI is operated in a manner that minimizes any adverse impact to the environment. The ITRI facility is in compliance with air quality and hazardous waste regulations. However, due to the previous operations of its six on-site sewage lagoons, groundwater in the ITRI vicinity contains nitrate, total dissolved solids, and sulfate contamination that exceeds state groundwater standards. Also, due to an underground fuel system leak, a localized area of groundwater is contaminated with diesel fuel. In addition, a small quantity of mixed low-level waste generated in the process of laboratory research is presently stored on site while treatment and disposal options are determined. Based on present information, the contaminant plume originating from the sewage lagoons has not migrated off the ITRI site. In addition, a groundwater assessment is underway to determine the extent of groundwater contamination and options for remediation, if required. Diesel fuel leaks and spills have been characterized, and the extent of the contamination is currently being assessed with five new monitoring wells, MW-12 through {minus}15. All underground tanks and fuel lines have been removed, along with associated contaminated soil. A soil venting and volatilization remediation system continues to operate in the area of a fuel leak, where further remediation may be required to remove diesel oil in the groundwater.

  8. 1999 SITE ENVIRONMENTAL REPORT

    SciTech Connect

    ENGEL-COX,J.; ZIMMERMAN,E.; LEE,R.; WILLIAMS,J.; GREEN,T.; PAQUETTE,D.; HOODA,B.; SCARPITTA,S.; GENZER,P.; ET AL

    2000-09-01

    Throughout the scientific community, Brookhaven National Laboratory (BNL) is renowned for its leading-edge research in physics, medicine, chemistry, biology, materials, and the environment. BNL is committed to supporting its world-class scientific research with an internationally recognized environmental protection program. The 1999 Site Environmental Report (SER) summarizes the status of the Laboratory's environmental programs and performance, including the steady progress towards cleaning up the site and fully integrating environmental stewardship into all facets of the Laboratory's mission. BNL is located on 5,265 acres of pine barrens in Suffolk County in the center of Long Island, New York. The Laboratory is situated above a sole source aquifer at the headwaters of the Peconic River; therefore, protecting ground and surface water quality is a special concern. Approximately 3,600 acres of the site are undeveloped and serve as habitat for a wide variety of animals and plants, including one New York State endangered species, the tiger salamander, and two New York State threatened species, the banded sunfish and the stiff goldenrod. Monitoring, preserving, and restoring these ecological resources is a high priority for the Laboratory.

  9. Astronomy. Internet site

    NASA Astrophysics Data System (ADS)

    Maksimenko, Anatoly Vasilievich

    The Internet site covers a wide area of actual astronomical topics, including 1) Astronomical News 2) Didactics of Astronomy 3) Space Research (Cosmonautics) 4) That's interesting 5) A Handbook of an astronomer 6) The Solar system 7) A Photogalery 8) Works of Schoolars 9) History of Astronomy The most important of them is the section concerning Space Research (Cosmonautics). This section covers a wide range of topics, beginning with very complete Illustrated History of Soviet Space research , the building of Soviet Rockets, a complete list of Cosmonauts with biographies, a list of all the flies. The author of the site concerns much ineterest to recent and extraordinary astronomiucal phenomena, such as Hazardous asteroids, Comets, Solar and Moon Eclipses, Meteorites, as well as to correct from the scientifical point of view interpretation of the extraordinary astronomical phenomena. The section concerning the Solar system is richly illustrated and give detailed explanations to Solar System evolution and actual state, explains many phenomena in the Solar system. THe Internet site is designed for schoolars as well as to amateur and professional astronomers.

  10. Chemical composition of Martian fines

    NASA Technical Reports Server (NTRS)

    Clark, B. C.; Baird, A. K.; Weldon, R. J.; Tsusaki, D. M.; Schnabel, L.; Candelaria, M. P.

    1982-01-01

    Of the 21 samples acquired for the Viking X-ray fluorescence spectrometer, 17 were analyzed to high precision. Compared to typical terrestrial continental soils and lunar mare fines, the Martian fines are lower in Al, higher in Fe, and much higher in S and Cl concentrations. Protected fines at the two lander sites are almost indistinguishable, but concentration of the element S is somewhat higher at Utopia. Duricrust fragments, successfully acquired only at the Chryse site, invariably contained about 50% higher S than fines. No elements correlate positively with S, except Cl and possibly Mg. A sympathetic variation is found among the triad Si, Al, Ca; positive correlation occurs between Ti and Fe. Sample variabilities are as great within a few meters as between lander locations (4500 km apart), implying the existence of a universal Martian regolith component of constant average composition. The nature of the source materials for the regolith fines must be mafic to ultramafic.

  11. Secondary plant succession on disturbed sites at Yucca Mountain, Nevada

    SciTech Connect

    Angerer, J.P.; Ostler, W.K.; Gabbert, W.D.; Schultz, B.W.

    1994-12-01

    This report presents the results of a study of secondary plant succession on disturbed sites created during initial site investigations in the late 1970s and early 1980s at Yucca Mountain, NV. Specific study objectives were to determine the rate and success of secondary plant succession, identify plant species found in disturbances that may be suitable for site-specific reclamation, and to identify environmental variables that influence succession on disturbed sites. During 1991 and 1992, fifty seven disturbed sites were located. Vegetation parameters, disturbance characteristics and environmental variables were measured at each site. Disturbed site vegetation parameters were compared to that of undisturbed sites to determine the status of disturbed site plant succession. Vegetation on disturbed sites, after an average of ten years, was different from undisturbed areas. Ambrosia dumosa, Chrysothamnus teretifolius, Hymenoclea salsola, Gutierrezia sarothrae, Atriplex confertifolia, Atriplex canescens, and Stephanomeria pauciflora were the most dominant species across all disturbed sites. With the exception of A. dumosa, these species were generally minor components of the undisturbed vegetation. Elevation, soil compaction, soil potassium, and amounts of sand and gravel in the soil were found to be significant environmental variables influencing the species composition and abundance of perennial plants on disturbed sites. The recovery rate for disturbed site secondary succession was estimated. Using a linear function (which would represent optimal conditions), the recovery rate for perennial plant cover, regardless of which species comprised the cover, was estimated to be 20 years. However, when a logarithmic function (which would represent probable conditions) was used, the recovery rate was estimated to be 845 years. Recommendations for future studies and site-specific reclamation of disturbances are presented.

  12. Workshop on Geology of the Apollo 17 Landing Site

    NASA Technical Reports Server (NTRS)

    Ryder, G. (Editor); Schmitt, H. H. (Editor); Spudis, P. D. (Editor)

    1992-01-01

    The topics covered include the following: petrology, lithology, lunar rocks, lunar soil, geochemistry, lunar geology, lunar resources, oxygen production, ilmenite, volcanism, highlands, lunar maria, massifs, impact melts, breccias, lunar crust, Taurus-Littrow, minerals, site selection, regolith, glasses, geomorphology, basalts, tectonics, planetary evolution, anorthosite, titanium oxides, chemical composition, and the Sudbury-Serenitatis analogy.

  13. Phase 1 of the North Site cleanup: Definition of product streams. Volume 1

    SciTech Connect

    Sorini, S.; Merriam, N.

    1994-03-01

    Various materials and equipment have accumulated at the Western Research Institute (WRI) North Site Facility since its commissioning in 1968. This facility was built by the US Bureau of Mines, transferred to the US Energy Research Development Administration (ERDA) in 1976, and transferred once again to the US Department of Energy (DOE) shortly thereafter. In 1983, the North Site Facility became part of WRI. The materials that have accumulated over the years at the site have been stored in drums, tanks, and open piles. They vary from oil shale, tar sand, and coal feedstocks to products and materials associated with in situ simulation and surface process developments associated with these feedstocks. The majority of these materials have been associated with DOE North Site activities and work performed at the North Site under DOE-WRI cooperative agreement contracts. In phase I of the North Site Facility cleanup project, these materials were sampled and evaluated to determine their chemical characteristics for proper disposal or use in accordance with current local, state, and federal regulations. Phase I of the North Site Facility cleanup project involved dividing the stored materials into product streams and dividing each product stream into composite groups. Composite groups contain materials known to be similar in composition, source, and process exposure. For each composite group, materials, which are representative of the composite, were selected for sampling, compositing, and analysis.

  14. A new scheme to characterize and identify protein ubiquitination sites.

    PubMed

    Nguyen, Van-Nui; Huang, Kai-Yao; Huang, Chien-Hsun; Lai, K Robert; Lee, Tzong-Yi

    2016-02-08

    Protein ubiquitination, involving the conjugation of ubiquitin on lysine residue, serves as an important modulator of many cellular functions in eukaryotes. Recent advancements in proteomic technology have stimulated increasing interest in identifying ubiquitination sites. However, most computational tools for predicting ubiquitination sites are focused on small-scale data. With an increasing number of experimentally verified ubiquitination sites, we were motivated to design a predictive model for identifying lysine ubiquitination sites for large-scale proteome dataset. This work assessed not only single features, such as amino acid composition (AAC), amino acid pair composition (AAPC) and evolutionary information, but also the effectiveness of incorporating two or more features into a hybrid approach to model construction. The support vector machine (SVM) was applied to generate the prediction models for ubiquitination site identification. Evaluation by five-fold cross-validation showed that the SVM models learned from the combination of hybrid features delivered a better prediction performance. Additionally, a motif discovery tool, MDDLogo, was adopted to characterize the potential substrate motifs of ubiquitination sites. The SVM models integrating the MDDLogo-identified substrate motifs could yield an average accuracy of 68.70%. Furthermore, the independent testing result showed that the MDDLogo-clustered SVM models could provide a promising accuracy (78.50%) and perform better than other prediction tools. Two cases have demonstrated the effective prediction of ubiquitination sites with corresponding substrate motifs.

  15. 1994 Site Environmental Report

    SciTech Connect

    1995-05-01

    The 1994 Site Environmental Report summarizes environmental activities at Lawrence Berkeley Laboratory (LBL) for the calendar year (CY) 1994. The report strives to present environmental data in a manner that characterizes the performance and compliance status of the Laboratory`s environmental management programs when measured against regulatory standards and DOE requirements. The report also discusses significant highlight and planning efforts of these programs. The format and content of the report are consistent with the requirements of the US Department of Energy (DOE) Order 5400.1, General Environmental Protection Program.

  16. Selective pacing sites.

    PubMed

    Coppola, G; La Greca, C; Corrado, E; Ajello, L; Nogara, A; Ciaramitaro, G; Augugliaro, S; Novo, G; Novo, S; Assennato, P

    2015-04-01

    he right ventricular apex (RVA) has always been the most used pacing site, because it is easily accessible and provides a stable lead position with a low dislodgment rate. However, it is well-known that long-term right ventricular apical pacing may have deleterious effects on left ventricular function by inducing a iatrogenic left bundle branch block, which can have strong influences on the left ventricle hemodynamic performances. More specifically, RVA pacing causes abnormal contraction patterns and the consequent dyssynchrony may cause myocardial perfusion defects, histopathological alterations, left ventricular dilation and both systolic and diastolic left ventricular dysfunction. All these long-term changes could account for the higher morbidity and mortality rates observe in patients with chronic RVA pacing compared with atrial pacing. This observation led to the reassessment of traditional approaches and to the research of alternative pacing sites, in order to get to more physiological pattern of ventricular activation and to avoid deleterious effects. Then, attempts were made with: right ventricular outflow tract (RVOT) pacing, direct His bundle pacing (DHBP), parahisian pacing (PHP) and bifocal (RVA + RVOT) pacing. For example, RVOT pacing, especially in its septal portion, is superior to the RVA pacing and it would determine a contraction pattern very similar to the spontaneous one, not only because the septal portions are the first parts to became depolarized, but also for the proximity to the normal conduction system. RVOT is preferable in terms of safety too. DHBP is an attractive alternative to RVA pacing because it leads to a synchronous depolarization of myocardial cells and, therefore, to an efficient ventricular contraction. So it would be the best technique, however the procedure requires longer average implant times and dedicated instruments and it cannot be carried out in patients affected by His bundle pathologies; furthermore, due to the His

  17. Perspective: On the active site model in computational catalyst screening

    NASA Astrophysics Data System (ADS)

    Reuter, Karsten; Plaisance, Craig P.; Oberhofer, Harald; Andersen, Mie

    2017-01-01

    First-principles screening approaches exploiting energy trends in surface adsorption represent an unparalleled success story in recent computational catalysis research. Here we argue that our still limited understanding of the structure of active sites is one of the major bottlenecks towards an ever extended and reliable use of such computational screening for catalyst discovery. For low-index transition metal surfaces, the prevalently chosen high-symmetry (terrace and step) sites offered by the nominal bulk-truncated crystal lattice might be justified. For more complex surfaces and composite catalyst materials, computational screening studies will need to actively embrace a considerable uncertainty with respect to what truly are the active sites. By systematically exploring the space of possible active site motifs, such studies might eventually contribute towards a targeted design of optimized sites in future catalysts.

  18. Site Enforcement Tracking System (SETS): National PRP listing by site

    SciTech Connect

    Not Available

    1992-07-01

    When expending Superfund monies at a CERCLA (Comprehensive Environmental Response, Compensation and Liability Act) site, EPA must conduct a search to identify parties with potential financial responsibility for remediation of uncontrolled hazardous waste sites. EPA regional Superfund Waste Management Staff issue a notice letter to the potentially responsible party (PRP). Data from the notice letter is used to form the Site Enforcement Tracking System (SETS). The data includes PRP name and address, a company contact person, the date the notice was issued, and the related CERCLA site name and identification number. SETS was created to track PRP identification at both NPL (National Priorities List) and non-NPL sites. SETS does not address the range of other administrative duties related to tracking the PRP. The listing by site name is organized in the following manner. Sites are sorted by state, as indicated in the site ID number. The first two characters of the site ID number constitute the state abbreviation of the site location. The listing by party name is arranged alphabetically by the name of the party and provides a company contact and address. Within each record, the sites associated with the PRP are listed. The first two characters of the site ID number constitute the state abbreviation of the site location.

  19. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Ansell, G. S.; Loewy, R. G.; Wiberley, S. E.

    1979-01-01

    A multifaceted program is described in which aeronautical, mechanical, and materials engineers interact to develop composite aircraft structures. Topics covered include: (1) the design of an advanced composite elevator and a proposed spar and rib assembly; (2) optimizing fiber orientation in the vicinity of heavily loaded joints; (3) failure mechanisms and delamination; (4) the construction of an ultralight sailplane; (5) computer-aided design; finite element analysis programs, preprocessor development, and array preprocessor for SPAR; (6) advanced analysis methods for composite structures; (7) ultrasonic nondestructive testing; (8) physical properties of epoxy resins and composites; (9) fatigue in composite materials, and (10) transverse thermal expansion of carbon/epoxy composites.

  20. Geochemistry and Impact History at the Apollo 16 Landing Site

    NASA Technical Reports Server (NTRS)

    Zellner, N. E. B.; Spudis, P. D.; Delano, J. W.; Whittet, D. C. B.; Swindle, T. D.

    2003-01-01

    Lunar impact glasses possess the unmodified refractory element ratios of the original fused target materials at the sites of impacts. These target materials are usually regolith. 866 glasses from the Apollo 16 landing site have been analyzed by electron microprobe in this study. These glasses show significant variation and hint at the existence of highland basalt (HB) regolith compositions atypical of the usual HB compositions historically found at the Apollo 16 site. Additionally, a large number of mare glasses have been identified. Clementine color image data have been used to construct iron, titanium, and aluminum maps for comparison with the sample database. These maps suggest that the Apollo 16 landing site is largely composed of anorthositic material and that mare compositions are not found close by. Nine of these impact glasses have been dated by the Ar-40/Ar-39 technique and may be used to constrain the impact history at the Apollo 16 landing site. These results illustrate how lunar impact glasses together with orbital data can provide geochemical constraints on the local and regional geology of the Moon.

  1. Equilibrium defects and solute site preferences in intermetallics: I. thermodynamics

    NASA Astrophysics Data System (ADS)

    Collins, Gary S.; Zacate, Matthew O.

    2001-03-01

    A model was developed to describe equilibrium defects and site preferences of dilute solute atoms in compounds having the CsCl and Ni_2Al3 structures. Equilibrium defects considered were combinations of elementary point defects that preserve the composition. Equilibria among possible defect combinations were combined with appropriate equations of constraint to obtain defect concentrations as a function of temperature and possible deviation from the stoichiometric composition. As an application, site-energies of defects and solutes in AB and A_2B_3) systems were estimated using Miedema's empirical model, with A=(Ni, Pd, Pt) and B= (Al, Ga, In). Dominant equilibrium defects in the respective systems were found to be the "triple defect" (2V_A+ A_B) and "octal defect" (5V_A+ 3A_B). Site preferences were found to depend on concentrations of intrinsic defects as well as on site-energy differences, and results reveal how preferences generally depend on temperature and composition. Consider solute S which, based on site energies, prefers to replace atom B. It is found that S always occupies B-sites in B-deficient alloys. In B-rich alloys, however, S may or may not occupy B-sites, depending on site-energy differences and the formation energies of equilibrium defects. For a solute that prefers to replace atom A, analogous results are obtained but with A replacing B in the three preceding sentences. This work was supported in part by the NSF under grant DMR 96-12306.

  2. 1996 Site environmental report

    SciTech Connect

    1997-06-01

    The FEMP is a Department of Energy (DOE)-owned facility that produced high-quality uranium metals for military defense for nearly 40 years. DOE suspended production at the FEMP in 1989 and formally ended production in 1991. Although production activities have ceased, the site continues to examine the air and liquid pathways as possible routes through which pollutants from past operations and current remedial activities may leave the FEMP. The Site Environmental Report (SER) is prepared annually in accordance with DOE Order 5400.1, General Environmental Protection Program. This 1996 SER provides the general public as well as scientists and engineers with the results from the ongoing Environmental Monitoring Program. Also included in this report is information concerning the FEMP progress toward achieving full compliance with requirements set forth by DOE, U.S. Environmental Protection Agency (EPA), and Ohio EPA (OEPA). For some readers, the highlights provided in this Executive Summary may provide sufficient information. Many readers, however, may wish are presented here. All information presented in this summary is discussed more fully in the main body of this report.

  3. 2003 SITE ENVIRONMENTAL REPORT

    SciTech Connect

    ENVIRONMENT AND WASTE MANAGMENT SERVICES DIVISION; ET AL.

    2004-10-01

    Each year, Brookhaven National Laboratory (BNL), a multi-program national laboratory, prepares an annual Site Environmental Report (SER) in accordance with Order 231.1A, Environment, Safety and Health Reporting, of the U.S. Department of Energy (DOE). The SER is written to inform outside regulators, the public, and Laboratory employees of BNL's environmental performance during the calendar year in review, and to summarize BNL's on-site environmental data; environmental management performance; compliance with applicable DOE, Environmental Protection Agency (EPA), state, and local regulations; and environmental, restoration, and surveillance monitoring programs. BNL has prepared annual SERs since 1971 and has documented nearly all of its environmental history since the Laboratory's inception in 1947. This report is intended to be a technical document. It is available in print and as a downloadable file on the BNL web page at http://www.bnl.ser.htm. A summary of the SER is also prepared each year to provide a general overview, and is distributed with a CD version of the full-length SER. The summary supports BNL's educational and community outreach program.

  4. Spirit's Winter Work Site

    NASA Technical Reports Server (NTRS)

    2006-01-01

    [figure removed for brevity, see original site] Annotated Version

    This portion of an image acquired by the Mars Reconnaissance Orbiter's High Resolution Imaging Science Experiment camera shows the Spirit rover's winter campaign site. Spirit was parked on a slope tilted 11 degrees to the north to maximize sunlight during the southern winter season. 'Tyrone' is an area where the rover's wheels disturbed light-toned soils. Remote sensing and in-situ analyses found the light-toned soil at Tyrone to be sulfate rich and hydrated. The original picture is catalogued as PSP_001513_1655_red and was taken on Sept. 29, 2006.

    NASA's Jet Propulsion Laboratory, a division of the California Institute of Technology in Pasadena, manages the Mars Reconnaissance Orbiter for NASA's Science Mission Directorate, Washington. Lockheed Martin Space Systems, Denver, is the prime contractor for the project and built the spacecraft. The High Resolution Imaging Science Experiment is operated by the University of Arizona, Tucson, and the instrument was built by Ball Aerospace and Technology Corp., Boulder, Colo.

  5. Site Recommendation Subsurface Layout

    SciTech Connect

    C.L. Linden

    2000-06-28

    The purpose of this analysis is to develop a Subsurface Facility layout that is capable of accommodating the statutory capacity of 70,000 metric tons of uranium (MTU), as well as an option to expand the inventory capacity, if authorized, to 97,000 MTU. The layout configuration also requires a degree of flexibility to accommodate potential changes in site conditions or program requirements. The objective of this analysis is to provide a conceptual design of the Subsurface Facility sufficient to support the development of the Subsurface Facility System Description Document (CRWMS M&O 2000e) and the ''Emplacement Drift System Description Document'' (CRWMS M&O 2000i). As well, this analysis provides input to the Site Recommendation Consideration Report. The scope of this analysis includes: (1) Evaluation of the existing facilities and their integration into the Subsurface Facility design. (2) Identification and incorporation of factors influencing Subsurface Facility design, such as geological constraints, thermal loading, constructibility, subsurface ventilation, drainage control, radiological considerations, and the Test and Evaluation Facilities. (3) Development of a layout showing an available area in the primary area sufficient to support both the waste inventories and individual layouts showing the emplacement area required for 70,000 MTU and, if authorized, 97,000 MTU.

  6. AMF 1 Site Science

    SciTech Connect

    Miller, Mark Alan

    2016-08-18

    This report documents progress on DOE Grant# DE-FG02-08ER64531 funded by the Department of Energy’s Atmospheric Systems Research (ASR) program covering the period between its inception in 2008 and its conclusion in 2014. The Atmospheric Radiation Measurement (ARM) Program’s Mobile Facility #1 (AMF#1) is a collection of state-of-the art atmospheric sensing systems including remote and in situ instrumentation designed to characterize the atmospheric column above and in the immediate vicinity of the deployment location. The grant discussed in this report funded the activities of the AMF#1 Site Scientist Team. Broad responsibilities of this team included examining new deployment sites and recommending instrument deployment configurations; data quality control during the early stages of deployments and for certain instruments through the course of the deployment; scientific outreach in the host country or location (particularly international deployments); scientific research oriented toward basic questions about cloud physics and radiation transfer in the deployment region; and training of Ph.D. students to conduct future research relevant to the Atmospheric Systems Research (ASR) program.

  7. Site Plan & Site Section of Citrus Landscape (Showing Relationship ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Site Plan & Site Section of Citrus Landscape (Showing Relationship of Groves & Irrigation System to Grove Canal) - Arlington Heights Citrus Landscape, Southwestern portion of city of Riverside, Riverside, Riverside County, CA

  8. Site Plan & Site Section of Citrus Landscape (Showing Relationship ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Site Plan & Site Section of Citrus Landscape (Showing Relationship of Victoria Avenue to Citrus Groves) - Arlington Heights Citrus Landscape, Southwestern portion of city of Riverside, Riverside, Riverside County, CA

  9. Preliminary siting activities for new waste handling facilities at the Idaho National Engineering Laboratory

    SciTech Connect

    Taylor, D.D.; Hoskinson, R.L.; Kingsford, C.O.; Ball, L.W.

    1994-09-01

    The Idaho Waste Processing Facility, the Mixed and Low-Level Waste Treatment Facility, and the Mixed and Low-Level Waste Disposal Facility are new waste treatment, storage, and disposal facilities that have been proposed at the Idaho National Engineering Laboratory (INEL). A prime consideration in planning for such facilities is the selection of a site. Since spring of 1992, waste management personnel at the INEL have been involved in activities directed to this end. These activities have resulted in the (a) identification of generic siting criteria, considered applicable to either treatment or disposal facilities for the purpose of preliminary site evaluations and comparisons, (b) selection of six candidate locations for siting,and (c) site-specific characterization of candidate sites relative to selected siting criteria. This report describes the information gathered in the above three categories for the six candidate sites. However, a single, preferred site has not yet been identified. Such a determination requires an overall, composite ranking of the candidate sites, which accounts for the fact that the sites under consideration have different advantages and disadvantages, that no single site is superior to all the others in all the siting criteria, and that the criteria should be assigned different weighing factors depending on whether a site is to host a treatment or a disposal facility. Stakeholder input should now be solicited to help guide the final selection. This input will include (a) siting issues not already identified in the siting, work to date, and (b) relative importances of the individual siting criteria. Final site selection will not be completed until stakeholder input (from the State of Idaho, regulatory agencies, the public, etc.) in the above areas has been obtained and a strategy has been developed to make a composite ranking of all candidate sites that accounts for all the siting criteria.

  10. ADASS XII Meeting Web Site

    NASA Astrophysics Data System (ADS)

    Liou, C.; Hulbert, S.

    We present the architecture, design, and implementation details of the ADASS XII web site. The web site was implemented in Zope, a high-performance application server, web server, and content management system rolled into one. Zope includes a robust, scalable object database, web services architecture, and powerful programming capabilities. The web site was built to conform to HTML, CSS, and accessibility standards as adopted by the W3C. This dynamic web site also taps into a back-end Sybase database while requiring a minimal amount of coding. We offer this site as a prototype web site suitable for reuse in supporting future ADASS meetings.

  11. On the Origin of Nonmare Materials at the Apollo 12 Landing Site

    NASA Technical Reports Server (NTRS)

    Jolliff, B. L.; Gillis, J. J.; Korotev, R. L.; Haskin, L. A.

    2000-01-01

    Sources of nonmare material at the Apollo 12 site are investigated using remotely sensed FeO and Th data and measured soil compositions. Copernicus ray ejecta, Reinhold ejecta, and vertical gardening of buried crater ejecta (Lansberg) are evaluated.

  12. Light element geochemistry of the Apollo 12 site

    NASA Technical Reports Server (NTRS)

    Kerridge, J. F.; Kaplan, I. R.; Kung, C. C.; Winter, D. A.; Friedman, D. L.; Desmarais, D. J.

    1978-01-01

    Analytical techniques of improved sensitivity have revealed details of the concentrations and isotopic compositions of light elements for a comprehensive suite of samples from the Apollo 12 regolith. These samples show a wide spread in maturity, although maximum contents observed for solar wind elements are less than observed at other sites, possibly reflecting relative recency of craters at the Apollo 12 site. Isotopic composition of nitrogen is consistent with the idea that N-15/N-14 in the solar wind has increased with time, at least a major part of this increase having occurred in the past 3.1 Gyr. Sulfur isotope systematics support a model in which sulfur is both added to the regolith, by meteoritic influx, and lost, by an isotopically selective process. Most soils from this site are heavily contaminated with terrestrial carbon.

  13. Preliminary siting characterization Salt Disposition Facility - Site B

    SciTech Connect

    Wyatt, D.

    2000-01-04

    A siting and reconnaissance geotechnical program has been completed in S-Area at the Savannah River Site in South Carolina. This program investigated the subsurface conditions for the area known as ``Salt Disposition Facility (SDF), Site B'' located northeast of H-Area and within the S-Area. Data acquired from the Site B investigation includes both field exploration and laboratory test data.

  14. Air electrode composition for solid oxide fuel cell

    DOEpatents

    Kuo, L.; Ruka, R.J.; Singhal, S.C.

    1999-08-03

    An air electrode composition for a solid oxide fuel cell is disclosed. The air electrode material is based on lanthanum manganite having a perovskite-like crystal structure ABO{sub 3}. The A-site of the air electrode composition comprises a mixed lanthanide in combination with rare earth and alkaline earth dopants. The B-site of the composition comprises Mn in combination with dopants such as Mg, Al, Cr and Ni. The mixed lanthanide comprises La, Ce, Pr and, optionally, Nd. The rare earth A-site dopants preferably comprise La, Nd or a combination thereof, while the alkaline earth A-site dopant preferably comprises Ca. The use of a mixed lanthanide substantially reduces raw material costs in comparison with compositions made from high purity lanthanum starting materials. The amount of the A-site and B-site dopants is controlled in order to provide an air electrode composition having a coefficient of thermal expansion which closely matches that of the other components of the solid oxide fuel cell. 3 figs.

  15. Air electrode composition for solid oxide fuel cell

    DOEpatents

    Kuo, Lewis; Ruka, Roswell J.; Singhal, Subhash C.

    1999-01-01

    An air electrode composition for a solid oxide fuel cell is disclosed. The air electrode material is based on lanthanum manganite having a perovskite-like crystal structure ABO.sub.3. The A-site of the air electrode composition comprises a mixed lanthanide in combination with rare earth and alkaline earth dopants. The B-site of the composition comprises Mn in combination with dopants such as Mg, Al, Cr and Ni. The mixed lanthanide comprises La, Ce, Pr and, optionally, Nd. The rare earth A-site dopants preferably comprise La, Nd or a combination thereof, while the alkaline earth A-site dopant preferably comprises Ca. The use of a mixed lanthanide substantially reduces raw material costs in comparison with compositions made from high purity lanthanum starting materials. The amount of the A-site and B-site dopants is controlled in order to provide an air electrode composition having a coefficient of thermal expansion which closely matches that of the other components of the solid oxide fuel cell.

  16. Microleakage resistance of minimally invasive Class I flowable composite restorations.

    PubMed

    Bonilla, Esteban D; Stevenson, Richard G; Caputo, Angelo A; White, Shane N

    2012-01-01

    Minimally invasive flowable composite Class I restorations are widely used. However, flowable composites are characterized by low filler contents, modified resin formulations, low moduli of elasticity, low viscosity, generally poor mechanical properties, and decreased long-term stability. The purpose of this study was to compare the microleakage resistance of a wide variety of flowable composites used with their manufacturers' recommended bonding systems to that of a long-used and widely studied microhybrid composite when placed as minimally invasive occlusal restorations. Molar teeth were prepared in a standardized manner, restored, artificially aged, stained, sectioned, evaluated, and analyzed. Microleakage varied substantially, by a whole order of magnitude, among the material groups tested. The control group, a conventional microhybrid composite material, leaked significantly less than all the flowable composite groups. Microleakage varied very slightly among measurement site locations. Tiny microscopic bubbles were seen within many of the flowable composite specimens, as were a few voids.

  17. Detergent gasoline composition

    SciTech Connect

    Biasotti, J.B.; Dille, K.L.; Dorn, P.; Herbstman, S.

    1980-05-27

    A detergent motor fuel composition is provided comprising a primary aliphatic hydrocarbon amino alkylene-substituted asparagine and an N-alkyl-alkylene diamine component. The additive composition consists of from 30 to 70 weight percent of aspargine.

  18. ACEE composite structures technology

    NASA Technical Reports Server (NTRS)

    Quinlivan, John T.; Wilson, Robert D.; Smith, Peter J.; Johnson, Ronald W.

    1984-01-01

    Toppics addressed include: advanced composites on Boeing commercial aircraft; composite wing durability; damage tolerance technology development; heavily loaded wing panel design; and pressure containment and damage tolerance in fuselages.

  19. Tough Composite Materials

    NASA Technical Reports Server (NTRS)

    Vosteen, L. F. (Compiler); Johnson, N. J. (Compiler); Teichman, L. A. (Compiler)

    1984-01-01

    Papers and working group summaries are presented which address composite material behavior and performance improvement. Topic areas include composite fracture toughness and impact characterization, constituent properties and interrelationships, and matrix synthesis and characterization.

  20. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Ansell, G. S.; Loewy, R. G.; Wiberley, S. E.

    1979-01-01

    Technology utilization of fiber reinforced composite materials is discussed in the areas of physical properties, and life prediction. Programs related to the Composite Aircraft Program are described in detail.

  1. Heteroporphyrin nanotubes and composites

    DOEpatents

    Shelnutt, John A.; Medforth, Craig J.; Wang, Zhongchun

    2007-05-29

    Heteroporphyrin nanotubes, metal nanostructures, and metal/porphyrin-nanotube composite nanostructures formed using the nanotubes as photocatalysts and structural templates, and the methods for forming the nanotubes and composites.

  2. Heteroporphyrin nanotubes and composites

    DOEpatents

    Shelnutt, John A.; Medforth, Craig J.; Wang, Zhongchun

    2006-11-07

    Heteroporphyrin nanotubes, metal nanostructures, and metal/porphyrin-nanotube composite nanostructures formed using the nanotubes as photocatalysts and structural templates, and the methods for forming the nanotubes and composites.

  3. Infiltrated carbon foam composites

    NASA Technical Reports Server (NTRS)

    Lucas, Rick D. (Inventor); Danford, Harry E. (Inventor); Plucinski, Janusz W. (Inventor); Merriman, Douglas J. (Inventor); Blacker, Jesse M. (Inventor)

    2012-01-01

    An infiltrated carbon foam composite and method for making the composite is described. The infiltrated carbon foam composite may include a carbonized carbon aerogel in cells of a carbon foam body and a resin is infiltrated into the carbon foam body filling the cells of the carbon foam body and spaces around the carbonized carbon aerogel. The infiltrated carbon foam composites may be useful for mid-density ablative thermal protection systems.

  4. Amorphous metal composites

    DOEpatents

    Byrne, Martin A.; Lupinski, John H.

    1984-01-01

    An improved amorphous metal composite and process of making the composite. The amorphous metal composite comprises amorphous metal (e.g. iron) and a low molecular weight thermosetting polymer binder. The process comprises placing an amorphous metal in particulate form and a thermosetting polymer binder powder into a container, mixing these materials, and applying heat and pressure to convert the mixture into an amorphous metal composite.

  5. Composite fuel cell membranes

    DOEpatents

    Plowman, K.R.; Rehg, T.J.; Davis, L.W.; Carl, W.P.; Cisar, A.J.; Eastland, C.S.

    1997-08-05

    A bilayer or trilayer composite ion exchange membrane is described suitable for use in a fuel cell. The composite membrane has a high equivalent weight thick layer in order to provide sufficient strength and low equivalent weight surface layers for improved electrical performance in a fuel cell. In use, the composite membrane is provided with electrode surface layers. The composite membrane can be composed of a sulfonic fluoropolymer in both core and surface layers.

  6. Composite fuel cell membranes

    DOEpatents

    Plowman, Keith R.; Rehg, Timothy J.; Davis, Larry W.; Carl, William P.; Cisar, Alan J.; Eastland, Charles S.

    1997-01-01

    A bilayer or trilayer composite ion exchange membrane suitable for use in a fuel cell. The composite membrane has a high equivalent weight thick layer in order to provide sufficient strength and low equivalent weight surface layers for improved electrical performance in a fuel cell. In use, the composite membrane is provided with electrode surface layers. The composite membrane can be composed of a sulfonic fluoropolymer in both core and surface layers.

  7. Nano-composite materials

    DOEpatents

    Lee, Se-Hee; Tracy, C. Edwin; Pitts, J. Roland

    2010-05-25

    Nano-composite materials are disclosed. An exemplary method of producing a nano-composite material may comprise co-sputtering a transition metal and a refractory metal in a reactive atmosphere. The method may also comprise co-depositing a transition metal and a refractory metal composite structure on a substrate. The method may further comprise thermally annealing the deposited transition metal and refractory metal composite structure in a reactive atmosphere.

  8. Thermoset molecular composites

    DOEpatents

    Benicewicz, Brian C.; Douglas, Elliot P.; Hjelm, Jr., Rex P.

    1996-01-01

    A polymeric composition including a liquid crystalline polymer and a thermosettable liquid crystalline monomer matrix, said polymeric composition characterized by a phase separation on the scale of less than about 500 Angstroms and a polymeric composition including a liquid crystalline polymer and a liquid crystalline thermoset matrix, said polymeric composition characterized by a phase separation on the scale of less than about 500 Angstroms are disclosed.

  9. 2006 SITE ENVIRONMENTAL REPORT

    SciTech Connect

    BROOKHAVEN NATIONAL LABORATORY; RATEL,K.

    2007-10-01

    Each year, Brookhaven National Laboratory (BNL) prepares an annual Site Environmental Report (SER) in accordance with DOE Order 231.1A, Environment, Safety and Health Reporting of the U.S. Department of Energy. The report is written to inform the public, regulators, employees, and other stakeholders of BNL's environmental performance during the calendar year in review. The SER summarizes environmental data; environmental management performance; compliance with applicable DOE, federal, state, and local regulations; and compliance, restoration, and surveillance monitoring program performance. BNL has prepared annual SERs since 1971 and has documented nearly all of its environmental history since the Laboratory's inception in 1947. The report is available in print and as a downloadable file on the BNL web page at http://www.bnl.gov/ewms/ser/. A summary of the SER is also prepared each year to provide a general overview of the report, and is distributed with a CD of the full report.

  10. 2009 Site Environmental Report

    SciTech Connect

    Ratel, K.M.; Brookhaven National Laboratory

    2010-09-30

    Each year, Brookhaven National Laboratory (BNL) prepares an annual Site Environmental Report (SER) in accordance with DOE Order 231.1A, Environment, Safety and Health Reporting of the U.S. Department of Energy. The report is written to inform the public, regulators, employees, and other stakeholders of BNL's environmental performance during the calendar year in review. The SER summarizes environmental data; environmental management performance; compliance with applicable DOE, federal, state, and local regulations; and compliance, restoration, and surveillance monitoring program performance. BNL has prepared annual SERs since 1971 and has documented nearly all of its environmental history since the Laboratory's inception in 1947. The report is available in print and as a downloadable file on the BNL web page at http://www.bnl.gov/ewms/ser/. A summary of the SER is also prepared each year to provide a general overview of the report, and is distributed with a CD of the full report.

  11. 2002 SITE ENVIRONMENTAL REPORT.

    SciTech Connect

    BROOKHAVEN NATIONAL LABORATORY

    2003-10-01

    The 2002 Site Environmental Report (SER) is prepared in accordance with DOE Order 231.1, ''Environment, Safety and Health Reporting'', and summarizes the status of Brookhaven National Laboratory's (BNL) environmental programs and performance and restoration efforts, as well as any impacts, both past and present, that Laboratory operations have had on the environment. The document is intended to be technical in nature. A summary of the report is also prepared as a separate document to provide a general overview and includes a CD version of the full report. Operated by Brookhaven Science Associates (BSA) for the Department of Energy (DOE), BNL manages its world-class scientific research with particular sensitivity to environmental and community issues. BNL's motto, ''Exploring Life's Mysteries...Protecting its Future'', reflects BNL's management philosophy to fully integrate environmental stewardship into all facets of its missions, with a health balance between science and the environment.

  12. 2005 SITE ENVIRONMENTAL REPORT

    SciTech Connect

    BROOKHAVEN NATIONAL LABORATORY

    2006-08-29

    Each year, Brookhaven National Laboratory (BNL) prepares an annual Site Environmental Report (SER) in accordance with DOE Order 231.1A, Environment, Safety and Health Reporting of the U.S. Department of Energy (DOE). The report is written to inform the public, regulators, employees, and other stakeholders of BNL's environmental performance during the calendar year in review. The SER summarizes environmental data; environmental management performance; compliance with applicable DOE, federal, state, and local regulations; and compliance, restoration, and surveillance monitoring program performance. BNL has prepared annual SERs since 1971 and has documented nearly all of its environmental history since the Laboratory's inception in 1947. The report is available in print and as a downloadable file on the BNL web page at http://www.bnl.gov/ewms/ser/. A summary of the SER is also prepared each year to provide a general overview of the report, and is distributed with a CD of the full report.

  13. The site-2 protease.

    PubMed

    Rawson, Robert B

    2013-12-01

    The site-2 protease (S2P) is an unusually-hydrophobic integral membrane protease. It cleaves its substrates, which are membrane-bound transcription factors, within membrane-spanning helices. Although structural information for S2P from animals is lacking, the available data suggest that cleavage may occur at or within the lipid bilayer. In mammalian cells, S2P is essential owing to its activation of the sterol regulatory element binding proteins (SREBPs); in the absence of exogenous lipid, cells lacking S2P cannot survive. S2P is also important in the endoplasmic reticulum (ER) stress response, activating several different membrane-bound transcription factors. Human patients harboring reduction-of-function mutations in S2P exhibit an array of pathologies ranging from skin defects to neurological abnormalities. Surprisingly, Drosophila melanogaster lacking S2P are viable and fertile. This article is part of a Special Issue entitled: Intramembrane Proteases.

  14. Web Site Development Support

    NASA Technical Reports Server (NTRS)

    Abdul, Hameed

    2016-01-01

    This summer I assisted the RPT Program Office in developing a design plan to update their existing website to current NASA web standards. The finished website is intended for the general public, specifically potential customers interested in learning about NASA's chemical rocket test facility capabilities and test assignment process. The goal of the website is to give the public insight about the purpose and function of the RPT Program. Working on this project gave me the opportunity to learn skills necessary for effective project management. The RPT Program Office manages numerous facilities so they are required to travel often to other sites for meetings throughout the year. Maneuvering around the travel schedule of the office and the workload priority of the IT Department proved to be quite the challenge. I overcame the travel schedule of the office by frequently communicating and checking in with my mentor via email and telephone.

  15. Lunar Skylights and Their Chemical Compositions

    NASA Astrophysics Data System (ADS)

    Wong, J.; Torres, J.; FitzHoward, S.; Luu, E.; Hua, J.; Irby, R.

    2013-12-01

    In 2009, the Japanese orbiter, SELenological and Engineering Explorer (SELENE) discovered a skylight on the near side of the moon. Skylights are collapsed ceilings of rilles, thought to be caused by moonquakes, meteoroids, or incomplete formation of these lava tube ceilings. Since then, NASA's Lunar Reconnaissance Orbiter has discovered two more skylights, also located on the near side of the moon. Previous research has shown that the physical characteristics of known rilles, can be used as indicators of the presence of yet undiscovered rille and lava dome locations across the lunar surface. We hypothesize that skylights have a signature chemical composition that is unique, and can be used to predict the location of additional skylights on the surface of the moon. For this study, we compared chemical composition data of the three mare sites containing skylights with the 21 mare sites without skylights. Using the software JMARS for the Moon, we compiled multiple datasets to measure the concentrations of 13 different chemical compounds including calcium, iron oxide, titanium dioxide, and thorium. We then conducted a two-tailed T-test of the data, which generated probability values for the mean differences across all 13 chemical compounds of the maria sites with skylights and the maria sites without skylights. Our results show that there is no statistical difference in chemical composition across all of the maria sites examined. Therefore, we conclude that chemical composition does not predict or indicate potential skylight locations on the moon. Further research on other skylight characteristics, for example depth and surrounding underground lava channels, may shed light on the relationships between mare and skylights locations. Three Skylight Locations Found on Lunar Surface 100m View of Mare Tranquilitatis Skylight

  16. Critical Path Web Site

    NASA Technical Reports Server (NTRS)

    Robinson, Judith L.; Charles, John B.; Rummel, John A. (Technical Monitor)

    2000-01-01

    Approximately three years ago, the Agency's lead center for the human elements of spaceflight (the Johnson Space Center), along with the National Biomedical Research Institute (NSBRI) (which has the lead role in developing countermeasures) initiated an activity to identify the most critical risks confronting extended human spaceflight. Two salient factors influenced this activity: first, what information is needed to enable a "go/no go" decision to embark on extended human spaceflight missions; and second, what knowledge and capabilities are needed to address known and potential health, safety and performance risks associated with such missions. A unique approach was used to first define and assess those risks, and then to prioritize them. This activity was called the Critical Path Roadmap (CPR) and it represents an opportunity to develop and implement a focused and evolving program of research and technology designed from a "risk reduction" perspective to prevent or minimize the risks to humans exposed to the space environment. The Critical Path Roadmap provides the foundation needed to ensure that human spaceflight, now and in the future, is as safe, productive and healthy as possible (within the constraints imposed on any particular mission) regardless of mission duration or destination. As a tool, the Critical Path Roadmap enables the decisionmaker to select from among the demonstrated or potential risks those that are to be mitigated, and the completeness of that mitigation. The primary audience for the CPR Web Site is the members of the scientific community who are interested in the research and technology efforts required for ensuring safe and productive human spaceflight. They may already be informed about the various space life sciences research programs or they may be newcomers. Providing the CPR content to potential investigators increases the probability of their delivering effective risk mitigations. Others who will use the CPR Web Site and its content

  17. Critical Path Web Site

    NASA Technical Reports Server (NTRS)

    Robinson, Judith L.; Charles, John B.; Rummel, John A. (Technical Monitor)

    2000-01-01

    Approximately three years ago, the Agency's lead center for the human elements of spaceflight (the Johnson Space Center), along with the National Biomedical Research Institute (NSBRI) (which has the lead role in developing countermeasures) initiated an activity to identify the most critical risks confronting extended human spaceflight. Two salient factors influenced this activity: first, what information is needed to enable a "go/no go" decision to embark on extended human spaceflight missions; and second, what knowledge and capabilities are needed to address known and potential health, safety and performance risks associated with such missions. A unique approach was used to first define and assess those risks, and then to prioritize them. This activity was called the Critical Path Roadmap (CPR) and it represents an opportunity to develop and implement a focused and evolving program of research and technology designed from a "risk reduction" perspective to prevent or minimize the risks to humans exposed to the space environment. The Critical Path Roadmap provides the foundation needed to ensure that human spaceflight, now and in the future, is as safe, productive and healthy as possible (within the constraints imposed on any particular mission) regardless of mission duration or destination. As a tool, the Critical Path Roadmap enables the decision maker to select from among the demonstrated or potential risks those that are to be mitigated, and the completeness of that mitigation. The primary audience for the CPR Web Site is the members of the scientific community who are interested in the research and technology efforts required for ensuring safe and productive human spaceflight. They may already be informed about the various space life sciences research programs or they may be newcomers. Providing the CPR content to potential investigators increases the probability of their delivering effective risk mitigations. Others who will use the CPR Web Site and its

  18. Composition: A Media Approach.

    ERIC Educational Resources Information Center

    Tuttle, Frederick B., Jr.

    This book explores the many visually oriented activities that can be used to teach the composition process. Chapter one outlines the format of the book and discusses the composition process in terms of visual perception and reaction to visual stimuli. Chapter two introduces the general aspects of composition that are pertinent to all types of…

  19. Phase change compositions

    DOEpatents

    Salyer, Ival O.; Griffen, Charles W.

    1986-01-01

    Compositions containing crystalline, long chain, alkyl hydrocarbons as phase change materials including cementitious compositions containing the alkyl hydrocarbons neat or in pellets or granules formed by incorporating the alkyl hydrocarbons in polymers or rubbers; and polymeric or elastomeric compositions containing alkyl hydrocarbons.

  20. Phase change compositions

    DOEpatents

    Salyer, Ival O.

    1989-01-01

    Compositions containing crystalline, straight chain, alkyl hydrocarbons as phase change materials including cementitious compositions containing the alkyl hydrocarbons neat or in pellets or granules formed by incorporating the alkyl hydrocarbons in polymers or rubbers; and polymeric or elastomeric compositions containing alkyl hydrocarbons.

  1. Solid polymer electrolyte compositions

    DOEpatents

    Garbe, James E.; Atanasoski, Radoslav; Hamrock, Steven J.; Le, Dinh Ba

    2001-01-01

    An electrolyte composition is featured that includes a solid, ionically conductive polymer, organically modified oxide particles that include organic groups covalently bonded to the oxide particles, and an alkali metal salt. The electrolyte composition is free of lithiated zeolite. The invention also features cells that incorporate the electrolyte composition.

  2. Polymer - Ceramic Composites.

    DTIC Science & Technology

    1988-04-01

    characteristic properties of our composite films are then compared with those of Piezel, a commercially available composite, manufactured by the Daikin Industry...S obtained on PIEZEL (composite of PZT and PVDF copolymer, supplied by Daikin Industries Limited of Japan) are also presented. 1% % .... . ,,, ,,,,~m

  3. Metal etching composition

    NASA Technical Reports Server (NTRS)

    Otousa, Joseph E. (Inventor); Thomas, Clark S. (Inventor); Foster, Robert E. (Inventor)

    1991-01-01

    The present invention is directed to a chemical etching composition for etching metals or metallic alloys. The composition includes a solution of hydrochloric acid, phosphoric acid, ethylene glycol, and an oxidizing agent. The etching composition is particularly useful for etching metal surfaces in preparation for subsequent fluorescent penetrant inspection.

  4. Individual Signatures Define Canine Skin Microbiota Composition and Variability

    PubMed Central

    Cuscó, Anna; Sánchez, Armand; Altet, Laura; Ferrer, Lluís; Francino, Olga

    2017-01-01

    Dogs present almost all their skin sites covered by hair, but canine skin disorders are more common in certain skin sites and breeds. The goal of our study is to characterize the composition and variability of the skin microbiota in healthy dogs and to evaluate the effect of the breed, the skin site, and the individual. We have analyzed eight skin sites of nine healthy dogs from three different breeds by massive sequencing of 16S rRNA gene V1–V2 hypervariable regions. The main phyla inhabiting the skin microbiota in healthy dogs are Proteobacteria, Firmicutes, Fusobacteria, Actinobacteria, and Bacteroidetes. Our results suggest that skin microbiota composition pattern is individual specific, with some dogs presenting an even representation of the main phyla and other dogs with only a major phylum. The individual is the main force driving skin microbiota composition and diversity rather than the skin site or the breed. The individual is explaining 45% of the distances among samples, whereas skin site explains 19% and breed 9%. Moreover, analysis of similarities suggests a strong dissimilarity among individuals (R = 0.79, P = 0.001) that is mainly explained by low-abundant species in each dog. Skin site also plays a role: inner pinna presents the highest diversity value, whereas perianal region presents the lowest one and the most differentiated microbiota composition. PMID:28220148

  5. Ecological Characterization Data for the 2004 Composite Analysis

    SciTech Connect

    Downs, Janelle L.; Simmons, Mary A.; Stegen, Jennifer A.; Bunn, Amoret L.; Tiller, Brett L.; Thorsten, Susan L.; Zufelt, Rhett K.

    2004-11-01

    A composite analysis is required by U.S. Department of Energy (DOE) Order 435.1 to ensure public safety through the management of active and planned low-level radioactive waste disposal facilities associated with the Hanford Site. The original Hanford Site Composite Analysis of 1998 must be revised and submitted to DOE Headquarters (DOE-HQ) in 2004 because of revisions to waste site information in the 100, 200, and 300 Areas, updated performance assessments and environmental impact statements (EIS), changes in inventory estimates for key sites and constituents, and a change in the definition of offsite receptors. Beginning in fiscal year (FY) 2003, the DOE Richland Operations Office (DOE-RL) initiated activities, including the development of data packages, to support the 2004 Composite Analysis. This report describes the data compiled in FY 2003 to support ecological site assessment modeling for the 2004 Composite Analysis. This work was conducted as part of the Characterization of Systems Task of the Groundwater Remediation Project (formerly the Groundwater Protection Program) managed by Fluor Hanford, Inc., Richland, Washington. The purpose of this report is to provide summaries of the characterization information and available spatial data on the biological resources and ecological receptors found in the upland, riparian, aquatic, and island habitats on the Hanford Site. These data constitute the reference information used to establish parameters for the ecological risk assessment module of the System Assessment Capability and other assessment activities requiring information on the presence and distribution of biota on the Hanford Site.

  6. Individual Signatures Define Canine Skin Microbiota Composition and Variability.

    PubMed

    Cuscó, Anna; Sánchez, Armand; Altet, Laura; Ferrer, Lluís; Francino, Olga

    2017-01-01

    Dogs present almost all their skin sites covered by hair, but canine skin disorders are more common in certain skin sites and breeds. The goal of our study is to characterize the composition and variability of the skin microbiota in healthy dogs and to evaluate the effect of the breed, the skin site, and the individual. We have analyzed eight skin sites of nine healthy dogs from three different breeds by massive sequencing of 16S rRNA gene V1-V2 hypervariable regions. The main phyla inhabiting the skin microbiota in healthy dogs are Proteobacteria, Firmicutes, Fusobacteria, Actinobacteria, and Bacteroidetes. Our results suggest that skin microbiota composition pattern is individual specific, with some dogs presenting an even representation of the main phyla and other dogs with only a major phylum. The individual is the main force driving skin microbiota composition and diversity rather than the skin site or the breed. The individual is explaining 45% of the distances among samples, whereas skin site explains 19% and breed 9%. Moreover, analysis of similarities suggests a strong dissimilarity among individuals (R = 0.79, P = 0.001) that is mainly explained by low-abundant species in each dog. Skin site also plays a role: inner pinna presents the highest diversity value, whereas perianal region presents the lowest one and the most differentiated microbiota composition.

  7. Site selection for Mars exobiology.

    PubMed

    Farmer, J; Des Marais, D; Greeley, R; Landheim, R; Klein, H

    1995-03-01

    The selection of sites on Mars that have a high priority for exobiological research is fundamental for planning future exploration. The most immediate need is to identify targets for high resolution orbital imaging during the Mars Observer and Mars '94/'96 missions that can be used to refine site priorities for surface exploration. We present an objective approach to site selection whereby individual sites are selected and scored, based on the presence of key geological features which indicate high priority environments. Prime sites are those that show evidence for the prolonged activity of liquid water and which have sedimentary deposits that are likely to have accumulated in environments favorable for life. High priority areas include fluvio-lacustrine (stream-fed lake systems), springs, and periglacial environments. Sites where mineralization may have occurred in the presence of organisms (e.g. springs) are given high priority in the search for a fossil record on Mars. A systematic review of Viking data for 83 sites in the Mars Landing Site Catalog resulted in the selection of 13 as being of exobiological interest. The descriptions of these sites were expanded to address exobiological concerns. An additional five sites were identified for inclusion in the second edition of the MLSC. We plan to broaden our site selection activities to include a systematic global reconnaissance of Mars using Viking data, and will continue to refine site priorities for exobiological research based on data from future missions in order to define strategies for surface exploration.

  8. Deciding on Site Licensing Options.

    ERIC Educational Resources Information Center

    O'Brien, Dennis

    1990-01-01

    Explains site licensing, which grants certain microcomputer software rights to a school or district for a fee. Differences of rights among vendors are discussed, the impact of networking on-site licensing is described, and examples of the benefits of site licensing in public school districts are given. (LRW)

  9. DNAPL SITE EVALUATION - Project Summary

    EPA Science Inventory

    Dense nonaqueous-phase liquids (DNAPLs), especially chlorinated solvents, are among the most prevalent subsurface contaminants identified in ground-water supplies and at waste disposal sites. There are several site-characterization issues specific to DNAPL sites including (a) the...

  10. Abandoned Mine Lands: Site Information

    EPA Pesticide Factsheets

    A catalogue of mining sites proposed for and listed on the NPL as well as mining sites being cleaned up using the Superfund Alternative Approach. Also mine sites not on the NPL but that have had removal or emergency response cleanup actions.

  11. School Site Decisions and Dollars.

    ERIC Educational Resources Information Center

    Grube, Karl W.

    Three papers, each with an extensive bibliography, advance arguments concerning (1) the school site as a public land resource, (2) school board policy as related to economic alternatives for open space school site planning, and (3) the establishment of outdoor classrooms on school sites as public policy. In the first paper, the author contends…

  12. Site selection for Mars exobiology

    NASA Technical Reports Server (NTRS)

    Farmer, J.; Des Marais, D.; Greeley, R.; Landheim, R.; Klein, H.

    1995-01-01

    The selection of sites on Mars that have a high priority for exobiological research is fundamental for planning future exploration. The most immediate need is to identify targets for high resolution orbital imaging during the Mars Observer and Mars '94/'96 missions that can be used to refined site priorities for surface exploration. We present an objective approach to site selection whereby individual sites are selected and scored, based on the presence of key geological features which indicate high priority environments. Prime sites are those that show evidence for the prolonged activity of liquid water and which have sedimentary deposits that are likely to have accumulated in environments favorable for life. High priority areas include fluvio-lacustrine (stream-fed lake systems), springs, and periglacial environments. Sites where mineralization may have occurred in the presence of organisms (e.g. springs) are given high priority in the search for a fossil record on Mars. A systematic review of Viking data for 83 sites in the Mars Landing Site Catalog (MLSC) resulted in the selection of 13 as being of exobiological interest. The descriptions of these sites were expanded to address exobiological concerns. An additional five sites were identified for inclusion in the second edition of the MLSC. We plan to broaden our site selection activities to include a systematic global reconnaissance of Mars using Viking data, and will continue to refine site priorities for exobiological research based on data from future missions in order to define strategies for surface exploration.

  13. Site-specific protein glycosylation analysis with glycan isomer differentiation.

    PubMed

    Hua, Serenus; Nwosu, Charles C; Strum, John S; Seipert, Richard R; An, Hyun Joo; Zivkovic, Angela M; German, J Bruce; Lebrilla, Carlito B

    2012-05-01

    Glycosylation is one of the most common yet diverse post-translational modifications. Information on glycan heterogeneity and glycosite occupancy is increasingly recognized as crucial to understanding glycoprotein structure and function. Yet, no approach currently exists with which to holistically consider both the proteomic and glycomic aspects of a system. Here, we developed a novel method of comprehensive glycosite profiling using nanoflow liquid chromatography/mass spectrometry (nano-LC/MS) that shows glycan isomer-specific differentiation on specific sites. Glycoproteins were digested by controlled non-specific proteolysis in order to produce informative glycopeptides. High-resolution, isomer-sensitive chromatographic separation of the glycopeptides was achieved using microfluidic chip-based capillaries packed with graphitized carbon. Integrated LC/MS/MS not only confirmed glycopeptide composition but also differentiated glycan and peptide isomers and yielded structural information on both the glycan and peptide moieties. Our analysis identified at least 13 distinct glycans (including isomers) corresponding to five compositions at the single N-glycosylation site on bovine ribonuclease B, 59 distinct glycans at five N-glycosylation sites on bovine lactoferrin, 13 distinct glycans at one N-glycosylation site on four subclasses of human immunoglobulin G, and 20 distinct glycans at five O-glycosylation sites on bovine κ-casein. Porous graphitized carbon provided effective separation of glycopeptide isomers. The integration of nano-LC with MS and MS/MS of non-specifically cleaved glycopeptides allows quantitative, isomer-sensitive, and site-specific glycoprotein analysis.

  14. ACEE composite structures technology

    NASA Technical Reports Server (NTRS)

    Klotzsche, M. (Compiler)

    1984-01-01

    The NASA Aircraft Energy Efficiency (ACEE) Composite Primary Aircraft Structures Program has made significant progress in the development of technology for advanced composites in commercial aircraft. Commercial airframe manufacturers have demonstrated technology readiness and cost effectiveness of advanced composites for secondary and medium primary components and have initiated a concerted program to develop the data base required for efficient application to safety-of-flight wing and fuselage structures. Oral presentations were compiled into five papers. Topics addressed include: damage tolerance and failsafe testing of composite vertical stabilizer; optimization of composite multi-row bolted joints; large wing joint demonstation components; and joints and cutouts in fuselage structure.

  15. Geographic and Operational Site Parameters List (GOSPL) for Hanford Assessments

    SciTech Connect

    Last, George V.; Nichols, William E.; Kincaid, Charles T.

    2006-06-01

    This data package was originally prepared to support a 2004 composite analysis (CA) of low-level waste disposal at the Hanford Site. The Technical Scope and Approach for the 2004 Composite Analysis of Low Level Waste Disposal at the Hanford Site (Kincaid et. al. 2004) identified the requirements for that analysis and served as the basis for initial preparation of this data package. Completion of the 2004 CA was later deferred, with the 2004 Annual Status Report for the Composite Analysis of Low-Level Waste Disposal in the Central Plateau at the Hanford Site (DOE 2005) indicating that a comprehensive update to the CA was in preparation and would be submitted in 2006. However, the U.S. Department of Energy (DOE) has recently decided to further defer the CA update and will use the cumulative assessment currently under preparation for the environmental impact statement (EIS) being prepared for tank closure and other site decisions as the updated CA. Submittal of the draft EIS is currently planned for FY 2008. This data package describes the facility-specific parameters (e.g. location, operational dates, etc.) used to numerically simulate contaminant flow and transport in large-scale Hanford assessments. Kincaid et al. (2004) indicated that the System Assessment Capability (SAC) (Kincaid et al. 2000; Bryce et al. 2002; Eslinger 2002a, 2002b) would be used to analyze over a thousand different waste sites. A master spreadsheet termed the Geographic and Operational Site Parameters List (GOSPL) was assembled to facilitate the generation of keyword input files containing general information on each waste site/facility, its operational/disposal history, and its environmental settings (past, current, and future). This report briefly describes each of the key data fields, including the source(s) of data, and provides the resulting inputs to be used for large-scale Hanford assessments.

  16. Chemical analysis of the moon at the surveyor v landing site.

    PubMed

    Turkevich, A L; Franzgrote, E J; Patterson, J H

    1967-11-03

    The chemical composition of the lunar surface material at a maria landing site has been determined by the alpha-scattering technique. Oxygen, silicon, and aluminum have been identified in the preliminary evaluation of the data. The general chemical composition is similar to that of a silicate of a basaltic type.

  17. Potential MER Landing Site in Melas Chasma

    NASA Technical Reports Server (NTRS)

    Weitz, C. M.; Parker, Timothy J.; Anderson, F. Scott

    2001-01-01

    We have selected one area in Valles Marineris as a potential landing site for the Mars Exploration Rover (MER) mission. After 30 years of analyses, the formation of the Valles Marineris system of troughs and its associated deposits still remains an enigma. Understanding all aspects of the Valles Marineris would significantly contribute to deciphering the internal and external history of Mars. A landing site within Melas Chasma could provide insight into both the formation of Valles Marineris and the composition and origin of the interior layered deposits (ILDs). The ILDs have been proposed as: (1) sedimentary deposits formed in lakes mass wasted material from the walls; (3) remnants of the wall rock; (4) carbonate deposits; (5) aeolian deposits; and (6) volcanic. More recently, Malin and Edgett suggest that the fine-scale, rhythmic layering seen in the interior deposits, as well as other layered deposits in craters, supports a sedimentary origin. Because an understanding of the formation of Valles Marineris and its interior deposits is so important to deciphering the history of Mars, we have proposed a landing site for the MER mission on an exposure of interior deposits in western Melas Chasma. Either MER-A and MER-B could land at this same location.

  18. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Loewy, Robert G.; Wiberley, Stephen E.

    1987-01-01

    The development and application of composite materials to aerospace vehicle structures which began in the mid 1960's has now progressed to the point where what can be considered entire airframes are being designed and built using composites. Issues related to the fabrication of non-resin matrix composites and the micro, mezzo and macromechanics of thermoplastic and metal matrix composites are emphasized. Several research efforts are presented. They are entitled: (1) The effects of chemical vapor deposition and thermal treatments on the properties of pitch-based carbon fiber; (2) Inelastic deformation of metal matrix laminates; (3) Analysis of fatigue damage in fibrous MMC laminates; (4) Delamination fracture toughness in thermoplastic matrix composites; (5) Numerical investigation of the microhardness of composite fracture; and (6) General beam theory for composite structures.

  19. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Ansell, G. S.; Loewy, R. G.; Wiberley, S. E.

    1984-01-01

    Progress is reported in studies of constituent materials composite materials, generic structural elements, processing science technology, and maintaining long-term structural integrity. Topics discussed include: mechanical properties of high performance carbon fibers; fatigue in composite materials; experimental and theoretical studies of moisture and temperature effects on the mechanical properties of graphite-epoxy laminates and neat resins; numerical investigations of the micromechanics of composite fracture; delamination failures of composite laminates; effect of notch size on composite laminates; improved beam theory for anisotropic materials; variation of resin properties through the thickness of cured samples; numerical analysis composite processing; heat treatment of metal matrix composites, and the RP-1 and RP2 gliders of the sailplane project.

  20. Investigation of off-site airborne transport of lead from a superfund removal action site using lead isotope ratios and concentrations

    USGS Publications Warehouse

    Pribil, Michael J.; Maddaloni, Mark A.; Staiger, Kimberly; Wilson, Eric; Magriples, Nick; Ali, Mustafa; Santella, Dennis

    2014-01-01

    Lead (Pb) concentration and Pb isotopic composition of surface and subsurface soil samples were used to investigate the potential for off-site air transport of Pb from a former white Pb processing facility to neighboring residential homes in a six block area on Staten Island, NY. Surface and subsurface soil samples collected on the Jewett White Pb site were found to range from 1.122 to 1.138 for 206Pb/207Pb and 2.393 to 2.411 for 208Pb/207Pb. The off-site surface soil samples collected from residential backyards, train trestle, near site grass patches and background areas varied from 1.144 to 1.196 for 206Pb/207Pb and 2.427 to 2.464 for 208Pb/207Pb. Two soil samples collected along Richmond Terrace, where Jewett site soils accumulated after major rain events, varied from 1.136 to 1.147 for 206Pb/207Pb and 2.407 to 2.419 for 208Pb/207Pb. Lead concentration for on-site surface soil samples ranged from 450 to 8000 ug/g, on-site subsurface soil samples ranged from 90,000 to 240,000 ug/g and off-site samples varied from 380 to 3500 ug/g. Lead concentration and isotopic composition for the Staten Island off-site samples were similar to previously published data for other northeastern US cities and reflect re-suspension and re-mobilization of local accumulated Pb. The considerable differences in both the Pb isotopic composition and Pb concentration of on-site and off-site samples resulted in the ability to geochemically trace the transport of particulate Pb. Data in this study indicate minimal off-site surface transport of Pb from the Jewett site into the neighboring residential area.

  1. Recover bromine on site

    SciTech Connect

    Schubert, P.; Mahajan, S.; Beatty, R.D.; Rostrup-Nielsen, T.; Schubert, D.W.; Lu, Phat Tan

    1993-04-01

    Chemists have long recognized the importance of recovering bromine from waste streams, and attempts to do so catalytically date back more than 50 years. Although the early interest in bromine recovery was driven primarily by economics, increased environmental pressures are providing additional incentives to recycle this element. As the acceptability of discharging wastes into the environment decreases, the cost of doing so increases, creating a need for alternative handling. The authors interest in waste bromine recovery was driven by both economic and environmental factors. In their evaluation of a research program that included a bromination step as part of a synthesis process, Catalytica researchers found that the process would be feasible commercially only if the waste HBr produced were recycled on site to bromine. A nonbromine route was eventually adopted for this particular research program, but the need for an economical and environmentally sound process for recycling HBr to bromine was recognized. The development of this process became a project in its own right. This process eliminates the need to form and ship aqueous sodium bromide offsite. It converts the waste HBr directly to bromine by catalytic oxidation.

  2. 2004 SITE ENVIRONMENTAL REPORT

    SciTech Connect

    BROOKHAVEN NATIONAL LABORATORY; SER TEAM; ENVIRONMENTAL INFORMATION MANAGEMENT SERVICES GROUP; ENVIROMENTAL AND WASTE MANAGEMENT SERVICES DIVISION FIELD SAMPLING TEAM

    2005-08-22

    Each year, Brookhaven National Laboratory (BNL) prepares an annual Site Environmental Report (SER) in accordance with DOE Order 231.1A, Environment, Safety and Health Reporting of the U.S. Department of Energy (DOE). The SER is written to inform the public, regulators, Laboratory employees, and other stakeholders of BNL's environmental performance during the calendar year in review. The report summarizes BNL's environmental data; environmental management performance; compliance with applicable DOE, federal, state, and local regulations; and restoration and surveillance monitoring programs. BNL has prepared annual SERs since 1971 and has documented nearly all of its environmental history since the Laboratory's inception in 1947. The SER is intended to be a technical document. It is available in print and as a downloadable file on the BNL web page at http://www.bnl.gov/esd/SER.htm. A summary of the SER is also prepared each year to provide a general overview of the report, and is distributed with a CD version of the full report. The summary supports BNL's educational and community outreach program.

  3. 2007 Site Environmental Report

    SciTech Connect

    Ratel,K.

    2008-10-01

    Brookhaven National Laboratory (BNL) prepares an annual Site Environmental Report (SER) in accordance with DOE Order 231.1A, Environment, Safety and Health Reporting of the U.S. Department of Energy. The report is written to inform the public, regulators, employees, and other stakeholders of the Laboratory's environmental performance during the calendar year in review. Volume I of the SER summarizes environmental data; environmental management performance; compliance with applicable DOE, federal, state, and local regulations; and performance in restoration and surveillance monitoring programs. BNL has prepared annual SERs since 1971 and has documented nearly all of its environmental history since the Laboratory's inception in 1947. Volume II of the SER, the Groundwater Status Report, also is prepared annually to report on the status of and evaluate the performance of groundwater treatment systems at the Laboratory. Volume II includes detailed technical summaries of groundwater data and its interpretation, and is intended for internal BNL users, regulators, and other technically oriented stakeholders. A brief summary of the information contained in Volume II is included in this volume in Chapter 7, Groundwater Protection. Both reports are available in print and as downloadable files on the BNL web page at http://www.bnl.gov/ewms/ser/. An electronic version on compact disc is distributed with each printed report. In addition, a summary of Volume I is prepared each year to provide a general overview of the report, and is distributed with a compact disc containing the-length report.

  4. Rocky Mountain Snowpack Chemistry at Selected Sites, 2002

    USGS Publications Warehouse

    Ingersoll, George P.; Mast, M. Alisa; Nanus, Leora; Manthorne, David J.; Clow, David W.; Handran, Heather M.; Winterringer, Jesse A.; Campbell, Donald H.

    2004-01-01

    During spring 2002, the chemical composition of annual snowpacks in the Rocky Mountain region of the Western United States was analyzed. Snow samples were collected at 75 geographically distributed sites extending from New Mexico to Montana. Near the end of the 2002 snowfall season, the snow-water equivalent (SWE) in annual snowpacks sampled generally was below average in most of the region. Regional patterns in the concentrations of major ions (including ammonium, nitrate, and sulfate), mercury, and stable sulfur isotope ratios are presented. The 2002 snowpack chemistry in the region differed from the previous year. Snowpack ammonium concentrations were higher at 66 percent of sites in Montana compared to concentrations in the 2001 snowpack but were lower at 74 percent of sites in Wyoming, Colorado, and New Mexico. Nitrate was lower at all Montana sites and lower at all but one Wyoming site; nitrate was higher at all but two Colorado sites and higher at all New Mexico sites. Sulfate was lower across the region at 77 percent of sites. The range of mercury concentrations for the region was similar to those of 2001 but showed more variability than ammonium, nitrate, and sulfate concentrations. Concentrations of stable sulfur isotope ratios exhibited a strong regional pattern with values increasing northward from southern Colorado to northern Colorado and Wyoming.

  5. Site Management Guide (Blue Book)

    SciTech Connect

    2014-03-01

    The U.S. Department of Energy (Department) Office of Legacy Management (LM), established in 2003, manages the Department’s postclosure responsibilities and ensures the future protection of human health and the environment. During World War II and the Cold War, the Federal government developed and operated a vast network of industrial facilities for the research, production, and testing of nuclear weapons, as well as other scientific and engineering research. These processes left a legacy of radioactive and chemical waste, environmental contamination, and hazardous facilities and materials at well over 100 sites. Since 1989, the Department has taken an aggressive accelerated cleanup approach to reduce risks and cut costs. At most Departmental sites undergoing cleanup, some residual hazards will remain at the time cleanup is completed due to financial and technical impracticality. However, the Department still has an obligation to protect human health and the environment after cleanup is completed. LM fulfills DOE’s postclosure obligation by providing long-term management of postcleanup sites which do not have continuing missions. LM is also responsible for sites under the Formerly Utilized Sites Remedial Action Program (FUSRAP). Currently, the U.S. Army Corps of Engineers (USACE) is responsible for site surveys and remediation at FUSRAP sites. Once remediation is completed, LM becomes responsible for long-term management. LM also has responsibility for uranium processing sites addressed by Title II of the Uranium Mill Tailings Radiation Control Act (UMTRCA). UMTRCA Title II sites are sites that were commercially owned and are regulated under a U.S. Nuclear Regulatory Commission (NRC) license. For license termination, the owner must conduct an NRC-approved cleanup of any on-site radioactive waste remaining from former uranium ore-processing operations. The site owner must also provide full funding for inspections and, if necessary, ongoing maintenance. Once site

  6. PIXE-RBS analysis on potteries unearthed from Lijiaba Site

    NASA Astrophysics Data System (ADS)

    Wu, Q. Q.; Zhu, J. J.; Liu, M. T.; Zhou, Z.; An, Z.; Huang, W.; He, Y. H.; Zhao, D. Y.

    2013-02-01

    A simultaneous proton induced X-ray emission (PIXE) and Rutherford backscattering spectrometry (RBS) analysis using 2 MeV proton beam and an aluminum funny filter was performed to identify and characterize elemental composition of 52 pottery shards in Shang-Zhou Dynasty (B.C.1700-B.C.221) unearthed from the Lijiaba Site, one of the habitations of Ba clan in the Three Gorges reservoir area in China. From the result of factor analysis of elemental composition, there was no obvious element assemblage phenomenon among the pottery shards with different types, which may suggest that there was no special clay source for special pottery at that time. Furthermore, a group of pottery elemental data from the Jinsha Site (B.C.1200-B.C.650) of Chengdu in China, the representative relic of Shu culture, was also employed to compare with those from the Lijiaba Site, and an obvious difference in elemental composition was observed, which perhaps indicated that only based on the elemental analysis of these potteries, no evidence of interchange was found between the two sites.

  7. Atomistic Modeling of Pd Site Preference in NiTi

    NASA Technical Reports Server (NTRS)

    Bozzolo, Guillermo; Noebe, Ronald D.; Mosca, Hugo O.

    2004-01-01

    An analysis of the site subsitution behavior of Pd in NiTi was performed using the BFS method for alloys. Through a combination of Monte Carlo simulations and detailed atom-by-atom energetic analyses of various computational cells, representing compositions of NiTi with up to 10 at% Pd, a detailed understanding of site occupancy of Pd in NiTi was revealed. Pd subsituted at the expense of Ni in a NiTi alloy will prefer the Ni-sites. Pd subsituted at the expense of Ti shows a very weak preference for Ti-sites that diminishes as the amount of Pd in the alloy increases and as the temperature increases.

  8. The geologic setting of the Luna 16 landing site

    USGS Publications Warehouse

    McCauley, J.F.; Scott, D.H.

    1972-01-01

    The Luna 16 landing site is similar in its geologic setting to Apollos 11 and 12. All three sites are located on basaltic mare fill which occurs mostly within multi-ring basins formed by impact earlier in the moon's history. A regolith developed by impact bombardment is present at each of these sites. The regolith is composed mostly of locally derived volcanic material, but also contains exotic fine fragments that have been ballistically transported into the landing sites by large impact events which formed craters such as Langrenus and Copernicus. These exotic fragments probably consist mostly of earlier reworked multi-ring basin debris and, although not directly traceable to individual sources, they do represent a good statistical sample of the composition of most of the premare terrac regions. ?? 1972.

  9. Surgical Site Infections

    PubMed Central

    Kleinman, Ken; Huang, Susan S.; Murphy, Michael V.; Yokoe, Deborah S.; Platt, Richard

    2017-01-01

    Background: Surgical site infection (SSI) rates are publicly reported as quality metrics and increasingly used to determine financial reimbursement. Objective: To evaluate the volume-outcome relationship as well as the year-to-year stability of performance rankings following coronary artery bypass graft (CABG) surgery and hip arthroplasty. Research Design: We performed a retrospective cohort study of Medicare beneficiaries who underwent CABG surgery or hip arthroplasty at US hospitals from 2005 to 2011, with outcomes analyzed through March 2012. Nationally validated claims-based surveillance methods were used to assess for SSI within 90 days of surgery. The relationship between procedure volume and SSI rate was assessed using logistic regression and generalized additive modeling. Year-to-year stability of SSI rates was evaluated using logistic regression to assess hospitals’ movement in and out of performance rankings linked to financial penalties. Results: Case-mix adjusted SSI risk based on claims was highest in hospitals performing <50 CABG/year and <200 hip arthroplasty/year compared with hospitals performing ≥200 procedures/year. At that same time, hospitals in the worst quartile in a given year based on claims had a low probability of remaining in that quartile the following year. This probability increased with volume, and when using 2 years’ experience, but the highest probabilities were only 0.59 for CABG (95% confidence interval, 0.52–0.66) and 0.48 for hip arthroplasty (95% confidence interval, 0.42–0.55). Conclusions: Aggregate SSI risk is highest in hospitals with low annual procedure volumes, yet these hospitals are currently excluded from quality reporting. Even for higher volume hospitals, year-to-year random variation makes past experience an unreliable estimator of current performance. PMID:27517331

  10. predCar-site: Carbonylation sites prediction in proteins using support vector machine with resolving data imbalanced issue.

    PubMed

    Hasan, Md Al Mehedi; Li, Jinyan; Ahmad, Shamim; Molla, Md Khademul Islam

    2017-03-09

    The carbonylation is found as an irreversible post-translational modification and considered a biomarker of oxidative stress. It plays major role not only in orchestrating various biological processes but also associated with some diseases such as Alzheimer's disease, diabetes, and Parkinson's disease. However, since the experimental technologies are costly and time-consuming to detect the carbonylation sites in proteins, an accurate computational method for predicting carbonylation sites is an urgent issue which can be useful for drug development. In this study, a novel computational tool termed predCar-Site has been developed to predict protein carbonylation sites by (1) incorporating the sequence-coupled information into the general pseudo amino acid composition, (2) balancing the effect of skewed training dataset by Different Error Costs method, and (3) constructing a predictor using support vector machine as classifier. This predCar-Site predictor achieves an average AUC (area under curve) score of 0.9959, 0.9999, 1, and 0.9997 in predicting the carbonylation sites of K, P, R, and T, respectively. All of the experimental results along with AUC are found from the average of 5 complete runs of the 10-fold cross-validation and those results indicate significantly better performance than existing predictors. A user-friendly web server of predCar-Site is available at http://research.ru.ac.bd/predCar-Site/.

  11. The "Shackleton Site" (IODP Site U1385) on the Iberian Margin

    NASA Astrophysics Data System (ADS)

    Hodell, D. A.; Lourens, L.; Stow, D. A. V.; Hernández-Molina, J.; Alvarez Zarikian, C. A.

    2013-11-01

    Nick Shackleton's research on piston cores from the Iberian margin highlighted the importance of this region for providing high-fidelity records of millennial-scale climate variability, and for correlating climate events from the marine environment to polar ice cores and European terrestrial sequences. During the Integrated Ocean Drilling Program (IODP) Expedition 339, we sought to extend the Iberian margin sediment record by drilling with the D/V JOIDES Resolution. Five holes were cored at Site U1385 using the advanced piston corer (APC) system to a maximum depth of ~155.9 m below sea floor (m b.s.f.). Immediately after the expedition, cores from all holes were analyzed by core scanning X-ray fluorescence (XRF) at 1 cm spatial resolution. Ca/Ti data were used to accurately correlate from hole-to-hole and construct a composite spliced section, containing no gaps or disturbed intervals to 166.5 m composite depth (mcd). A low-resolution (20 cm sample spacing) oxygen isotope record confirms that Site U1385 contains a continuous record of hemipelagic sedimentation from the Holocene to 1.43 Ma (Marine Isotope Stage 46). The sediment profile at Site U1385 extends across the middle Pleistocene transition (MPT) with sedimentation rates averaging ~10 cm kyr-1. Strong precession cycles in colour and elemental XRF signals provide a powerful tool for developing an orbitally tuned reference timescale. Site U1385 is likely to become an important type section for marine-ice-terrestrial core correlations and the study of orbital- and millennial-scale climate variability.

  12. Umatilla Satellite and Release Sites Project : Final Siting Report.

    SciTech Connect

    Montgomery, James M.

    1992-04-01

    This report presents the results of site analysis for the Umatilla Satellite and Release Sites Project. The purpose of this project is to provide engineering services for the siting and conceptual design of satellite and release facilities for the Umatilla Basin hatchery program. The Umatilla Basin hatchery program consists of artificial production facilities for salmon and steelhead to enhance production in the Umatilla River as defined in the Umatilla master plan approved in 1989 by the Northwest Power Planning Council. Facilities identified in the master plan include adult salmon broodstock holding and spawning facilities, facilities for recovery, acclimation, and/or extended rearing of salmon juveniles, and development of river sites for release of hatchery salmon and steelhead. The historic and current distribution of fall chinook, summer chinook, and coho salmon and steelhead trout was summarized for the Umatilla River basin. Current and future production and release objectives were reviewed. Twenty seven sites were evaluated for the potential and development of facilities. Engineering and environmental attributes of the sites were evaluated and compared to facility requirements for water and space. Site screening was conducted to identify the sites with the most potential for facility development. Alternative sites were selected for conceptual design of each facility type. A proposed program for adult holding facilities, final rearing/acclimation, and direct release facilities was developed.

  13. SitesIdentify: a protein functional site prediction tool

    PubMed Central

    2009-01-01

    Background The rate of protein structures being deposited in the Protein Data Bank surpasses the capacity to experimentally characterise them and therefore computational methods to analyse these structures have become increasingly important. Identifying the region of the protein most likely to be involved in function is useful in order to gain information about its potential role. There are many available approaches to predict functional site, but many are not made available via a publicly-accessible application. Results Here we present a functional site prediction tool (SitesIdentify), based on combining sequence conservation information with geometry-based cleft identification, that is freely available via a web-server. We have shown that SitesIdentify compares favourably to other functional site prediction tools in a comparison of seven methods on a non-redundant set of 237 enzymes with annotated active sites. Conclusion SitesIdentify is able to produce comparable accuracy in predicting functional sites to its closest available counterpart, but in addition achieves improved accuracy for proteins with few characterised homologues. SitesIdentify is available via a webserver at http://www.manchester.ac.uk/bioinformatics/sitesidentify/ PMID:19922660

  14. DephosSite: a machine learning approach for discovering phosphotase-specific dephosphorylation sites

    PubMed Central

    Wang, Xiaofeng; Yan, Renxiang; Song, Jiangning

    2016-01-01

    Protein dephosphorylation, which is an inverse process of phosphorylation, plays a crucial role in a myriad of cellular processes, including mitotic cycle, proliferation, differentiation, and cell growth. Compared with tyrosine kinase substrate and phosphorylation site prediction, there is a paucity of studies focusing on computational methods of predicting protein tyrosine phosphatase substrates and dephosphorylation sites. In this work, we developed two elegant models for predicting the substrate dephosphorylation sites of three specific phosphatases, namely, PTP1B, SHP-1, and SHP-2. The first predictor is called MGPS-DEPHOS, which is modified from the GPS (Group-based Prediction System) algorithm with an interpretable capability. The second predictor is called CKSAAP-DEPHOS, which is built through the combination of support vector machine (SVM) and the composition of k-spaced amino acid pairs (CKSAAP) encoding scheme. Benchmarking experiments using jackknife cross validation and 30 repeats of 5-fold cross validation tests show that MGPS-DEPHOS and CKSAAP-DEPHOS achieved AUC values of 0.921, 0.914 and 0.912, for predicting dephosphorylation sites of the three phosphatases PTP1B, SHP-1, and SHP-2, respectively. Both methods outperformed the previously developed kNN-DEPHOS algorithm. In addition, a web server implementing our algorithms is publicly available at http://genomics.fzu.edu.cn/dephossite/ for the research community. PMID:27002216

  15. DephosSite: a machine learning approach for discovering phosphotase-specific dephosphorylation sites.

    PubMed

    Wang, Xiaofeng; Yan, Renxiang; Song, Jiangning

    2016-03-22

    Protein dephosphorylation, which is an inverse process of phosphorylation, plays a crucial role in a myriad of cellular processes, including mitotic cycle, proliferation, differentiation, and cell growth. Compared with tyrosine kinase substrate and phosphorylation site prediction, there is a paucity of studies focusing on computational methods of predicting protein tyrosine phosphatase substrates and dephosphorylation sites. In this work, we developed two elegant models for predicting the substrate dephosphorylation sites of three specific phosphatases, namely, PTP1B, SHP-1, and SHP-2. The first predictor is called MGPS-DEPHOS, which is modified from the GPS (Group-based Prediction System) algorithm with an interpretable capability. The second predictor is called CKSAAP-DEPHOS, which is built through the combination of support vector machine (SVM) and the composition of k-spaced amino acid pairs (CKSAAP) encoding scheme. Benchmarking experiments using jackknife cross validation and 30 repeats of 5-fold cross validation tests show that MGPS-DEPHOS and CKSAAP-DEPHOS achieved AUC values of 0.921, 0.914 and 0.912, for predicting dephosphorylation sites of the three phosphatases PTP1B, SHP-1, and SHP-2, respectively. Both methods outperformed the previously developed kNN-DEPHOS algorithm. In addition, a web server implementing our algorithms is publicly available at http://genomics.fzu.edu.cn/dephossite/ for the research community.

  16. Nevada National Security Site Industrial Sites Project Closeout - 12498

    SciTech Connect

    Cabble, Kevin; Krauss, Mark; Matthews, Pat

    2012-07-01

    The U.S. Department of Energy (DOE), National Nuclear Security Administration Nevada Site Office is responsible for environmental restoration (ER) at the Nevada National Security Site (NNSS). This includes remediation at Industrial Sites where past nuclear testing activities and activities that supported nuclear testing may have or are known to have resulted in the release of contaminants into the environment. Industrial Sites at the NNSS have included nuclear facilities that supported the nuclear rocket/missile development programs, gas stations, landfills, spill sites, ordnance sites, and numerous other waste disposal and release sites. The NNSS Industrial Sites activities neared completion at the end of fiscal year 2011 while other activities required under the Federal Facility Agreement and Consent Order (FFACO) and part of the same NNSS ER Project are forecasted to extend to 2027 or beyond. With the majority of Industrial Sites corrective action units (CAUs) completed (more than 250 CAUs and over 1,800 corrective action sites), it was determined that an activity closeout process should be implemented to ensure that the work completed over the past 15 years is well documented in a comprehensive and concise summary. While the process used to close each individual CAU is described in approved documents, no single document describes in summary fashion the work completed to close the many individual Industrial Sites. The activity closeout process will be used to develop an Industrial Sites closeout document that describes these years of work. This document will summarize the number of Industrial Sites closed under the FFACO and provide general descriptions of projects, contaminants removed, and sites closed in place with corresponding Use Restrictions. Other pertinent information related to Industrial Sites work such as the project history, closure decisions, historical declarations, remediation strategies, and final CAU status will be included in the closeout

  17. Indirect resin composites

    PubMed Central

    Nandini, Suresh

    2010-01-01

    Aesthetic dentistry continues to evolve through innovations in bonding agents, restorative materials, and conservative preparation techniques. The use of direct composite restoration in posterior teeth is limited to relatively small cavities due to polymerization stresses. Indirect composites offer an esthetic alternative to ceramics for posterior teeth. This review article focuses on the material aspect of the newer generation of composites. This review was based on a PubMed database search which we limited to peer-reviewed articles in English that were published between 1990 and 2010 in dental journals. The key words used were ‘indirect resin composites,’ composite inlays,’ and ‘fiber-reinforced composites.’ PMID:21217945

  18. Hydrogen storage compositions

    DOEpatents

    Li, Wen; Vajo, John J.; Cumberland, Robert W.; Liu, Ping

    2011-04-19

    Compositions for hydrogen storage and methods of making such compositions employ an alloy that exhibits reversible formation/deformation of BH.sub.4.sup.- anions. The composition includes a ternary alloy including magnesium, boron and a metal and a metal hydride. The ternary alloy and the metal hydride are present in an amount sufficient to render the composition capable of hydrogen storage. The molar ratio of the metal to magnesium and boron in the alloy is such that the alloy exhibits reversible formation/deformation of BH.sub.4.sup.- anions. The hydrogen storage composition is prepared by combining magnesium, boron and a metal to prepare a ternary alloy and combining the ternary alloy with a metal hydride to form the hydrogen storage composition.

  19. Investigation of Composite Structures

    NASA Technical Reports Server (NTRS)

    Hyer, Michael W.

    2000-01-01

    This final report consists of a compilation of four separate written documents, three dealing with the response and failure of elliptical composite cylinders to an internal pressure load, and the fourth dealing with the influence of manufacturing imperfections in curved composite panels. The three focused on elliptical cylinders consist of the following: 1 - A paper entitled "Progressive Failure Analysis of Internally Pressurized Elliptical Composite Cylinders," 2 - A paper entitled "Influence of Geometric Nonlinearities on the Response and Failure of Internally Pressurized Elliptical Composite Cylinders," and 3 - A report entitled "Response and Failure of Internally Pressurized Elliptical Composite Cyclinders." The document which deals with the influence of manufacturing imperfections is a paper entitled "Manufacturing Distortions of Curved Composite Panels."

  20. Composite structural materials

    NASA Technical Reports Server (NTRS)

    Ansell, G. S.; Loewy, R. G.; Wiberley, S. E.

    1981-01-01

    The composite aircraft program component (CAPCOMP) is a graduate level project conducted in parallel with a composite structures program. The composite aircraft program glider (CAPGLIDE) is an undergraduate demonstration project which has as its objectives the design, fabrication, and testing of a foot launched ultralight glider using composite structures. The objective of the computer aided design (COMPAD) portion of the composites project is to provide computer tools for the analysis and design of composite structures. The major thrust of COMPAD is in the finite element area with effort directed at implementing finite element analysis capabilities and developing interactive graphics preprocessing and postprocessing capabilities. The criteria for selecting research projects to be conducted under the innovative and supporting research (INSURE) program are described.