Science.gov

Sample records for compressing hyperspectral image

  1. Longwave infrared compressive hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Dupuis, Julia R.; Kirby, Michael; Cosofret, Bogdan R.

    2015-06-01

    Physical Sciences Inc. (PSI) is developing a longwave infrared (LWIR) compressive sensing hyperspectral imager (CS HSI) based on a single pixel architecture for standoff vapor phase plume detection. The sensor employs novel use of a high throughput stationary interferometer and a digital micromirror device (DMD) converted for LWIR operation in place of the traditional cooled LWIR focal plane array. The CS HSI represents a substantial cost reduction over the state of the art in LWIR HSI instruments. Radiometric improvements for using the DMD in the LWIR spectral range have been identified and implemented. In addition, CS measurement and sparsity bases specifically tailored to the CS HSI instrument and chemical plume imaging have been developed and validated using LWIR hyperspectral image streams of chemical plumes. These bases enable comparable statistics to detection based on uncompressed data. In this paper, we present a system model predicting the overall performance of the CS HSI system. Results from a breadboard build and test validating the system model are reported. In addition, the measurement and sparsity basis work demonstrating the plume detection on compressed hyperspectral images is presented.

  2. Compression technique for plume hyperspectral images

    NASA Astrophysics Data System (ADS)

    Feather, B. K.; Fulkerson, S. A.; Jones, J. H.; Reed, R. A.; Simmons, M. A.; Swann, D. G.; Taylor, W. E.; Bernstein, L. S.

    2005-06-01

    The authors recently developed a hyperspectral image output option for a standardized government code designed to predict missile exhaust plume infrared signatures. Typical predictions cover the 2- to 5-m wavelength range (2000 to 5000 cm-1) at 5 cm-1 spectral resolution, and as a result the hyperspectral images have several hundred frequency channels. Several hundred hyperspectral plume images are needed to span the full operational envelope of missile altitude, Mach number, and aspect angle. Since the net disk storage space can be as large as 100 GB, a Principal Components Analysis is used to compress the spectral dimension, reducing the volume of data to just a few gigabytes. The principal challenge was to specify a robust default setting for the data compression routine suitable for general users, who are not necessarily specialists in data compression. Specifically, the objective was to provide reasonable data compression efficiency of the hyperspectral imagery while at the same time retaining sufficient accuracy for infrared scene generation and hardware-in-the-loop test applications over a range of sensor bandpasses and scenarios. In addition, although the end users of the code do not usually access the detailed spectral information contained in these hyperspectral images, this information must nevertheless be of sufficient fidelity so that atmospheric transmission losses between the missile plume and the sensor could be reliably computed as a function of range. Several metrics were used to determine how far the plume signature hyperspectral data could be safely compressed while still meeting these end-user requirements.

  3. ICER-3D Hyperspectral Image Compression Software

    NASA Technical Reports Server (NTRS)

    Xie, Hua; Kiely, Aaron; Klimesh, matthew; Aranki, Nazeeh

    2010-01-01

    Software has been developed to implement the ICER-3D algorithm. ICER-3D effects progressive, three-dimensional (3D), wavelet-based compression of hyperspectral images. If a compressed data stream is truncated, the progressive nature of the algorithm enables reconstruction of hyperspectral data at fidelity commensurate with the given data volume. The ICER-3D software is capable of providing either lossless or lossy compression, and incorporates an error-containment scheme to limit the effects of data loss during transmission. The compression algorithm, which was derived from the ICER image compression algorithm, includes wavelet-transform, context-modeling, and entropy coding subalgorithms. The 3D wavelet decomposition structure used by ICER-3D exploits correlations in all three dimensions of sets of hyperspectral image data, while facilitating elimination of spectral ringing artifacts, using a technique summarized in "Improving 3D Wavelet-Based Compression of Spectral Images" (NPO-41381), NASA Tech Briefs, Vol. 33, No. 3 (March 2009), page 7a. Correlation is further exploited by a context-modeling subalgorithm, which exploits spectral dependencies in the wavelet-transformed hyperspectral data, using an algorithm that is summarized in "Context Modeler for Wavelet Compression of Hyperspectral Images" (NPO-43239), which follows this article. An important feature of ICER-3D is a scheme for limiting the adverse effects of loss of data during transmission. In this scheme, as in the similar scheme used by ICER, the spatial-frequency domain is partitioned into rectangular error-containment regions. In ICER-3D, the partitions extend through all the wavelength bands. The data in each partition are compressed independently of those in the other partitions, so that loss or corruption of data from any partition does not affect the other partitions. Furthermore, because compression is progressive within each partition, when data are lost, any data from that partition received

  4. Hyperspectral image data compression based on DSP

    NASA Astrophysics Data System (ADS)

    Fan, Jiming; Zhou, Jiankang; Chen, Xinhua; Shen, Weimin

    2010-11-01

    The huge data volume of hyperspectral image challenges its transportation and store. It is necessary to find an effective method to compress the hyperspectral image. Through analysis and comparison of current various algorithms, a mixed compression algorithm based on prediction, integer wavelet transform and embedded zero-tree wavelet (EZW) is proposed in this paper. We adopt a high-powered Digital Signal Processor (DSP) of TMS320DM642 to realize the proposed algorithm. Through modifying the mixed algorithm and optimizing its algorithmic language, the processing efficiency of the program was significantly improved, compared the non-optimized one. Our experiment show that the mixed algorithm based on DSP runs much faster than the algorithm on personal computer. The proposed method can achieve the nearly real-time compression with excellent image quality and compression performance.

  5. A new hyperspectral image compression paradigm based on fusion

    NASA Astrophysics Data System (ADS)

    Guerra, Raúl; Melián, José; López, Sebastián.; Sarmiento, Roberto

    2016-10-01

    The on-board compression of remote sensed hyperspectral images is an important task nowadays. One of the main difficulties is that the compression of these images must be performed in the satellite which carries the hyperspectral sensor. Hence, this process must be performed by space qualified hardware, having area, power and speed limitations. Moreover, it is important to achieve high compression ratios without compromising the quality of the decompress image. In this manuscript we proposed a new methodology for compressing hyperspectral images based on hyperspectral image fusion concepts. The proposed compression process has two independent steps. The first one is to spatially degrade the remote sensed hyperspectral image to obtain a low resolution hyperspectral image. The second step is to spectrally degrade the remote sensed hyperspectral image to obtain a high resolution multispectral image. These two degraded images are then send to the earth surface, where they must be fused using a fusion algorithm for hyperspectral and multispectral image, in order to recover the remote sensed hyperspectral image. The main advantage of the proposed methodology for compressing remote sensed hyperspectral images is that the compression process, which must be performed on-board, becomes very simple, being the fusion process used to reconstruct image the more complex one. An extra advantage is that the compression ratio can be fixed in advanced. Many simulations have been performed using different fusion algorithms and different methodologies for degrading the hyperspectral image. The results obtained in the simulations performed corroborate the benefits of the proposed methodology.

  6. Compressive Hyperspectral Imaging and Anomaly Detection

    DTIC Science & Technology

    2010-02-01

    the desired jointly sparse a"s, one shall adjust a and b. 4.4 Hyperspectral Image Reconstruction and Denoising We apply the model x* = Da’ + e! to...iteration for compressive sensing and sparse denoising ,’" Communications in Mathematical Sciences , 2008. W. Yin, "Analysis and generalizations of...Aharon, M. Elad, and A. Bruckstein, "K- SVD : An algorithm for designing overcomplete dictionaries for sparse representation,’" IEEE Transactions on Signal

  7. Reconfigurable Hardware for Compressing Hyperspectral Image Data

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh; Namkung, Jeffrey; Villapando, Carlos; Kiely, Aaron; Klimesh, Matthew; Xie, Hua

    2010-01-01

    High-speed, low-power, reconfigurable electronic hardware has been developed to implement ICER-3D, an algorithm for compressing hyperspectral-image data. The algorithm and parts thereof have been the topics of several NASA Tech Briefs articles, including Context Modeler for Wavelet Compression of Hyperspectral Images (NPO-43239) and ICER-3D Hyperspectral Image Compression Software (NPO-43238), which appear elsewhere in this issue of NASA Tech Briefs. As described in more detail in those articles, the algorithm includes three main subalgorithms: one for computing wavelet transforms, one for context modeling, and one for entropy encoding. For the purpose of designing the hardware, these subalgorithms are treated as modules to be implemented efficiently in field-programmable gate arrays (FPGAs). The design takes advantage of industry- standard, commercially available FPGAs. The implementation targets the Xilinx Virtex II pro architecture, which has embedded PowerPC processor cores with flexible on-chip bus architecture. It incorporates an efficient parallel and pipelined architecture to compress the three-dimensional image data. The design provides for internal buffering to minimize intensive input/output operations while making efficient use of offchip memory. The design is scalable in that the subalgorithms are implemented as independent hardware modules that can be combined in parallel to increase throughput. The on-chip processor manages the overall operation of the compression system, including execution of the top-level control functions as well as scheduling, initiating, and monitoring processes. The design prototype has been demonstrated to be capable of compressing hyperspectral data at a rate of 4.5 megasamples per second at a conservative clock frequency of 50 MHz, with a potential for substantially greater throughput at a higher clock frequency. The power consumption of the prototype is less than 6.5 W. The reconfigurability (by means of reprogramming) of

  8. Compressive hyperspectral and multispectral imaging fusion

    NASA Astrophysics Data System (ADS)

    Espitia, Óscar; Castillo, Sergio; Arguello, Henry

    2016-05-01

    Image fusion is a valuable framework which combines two or more images of the same scene from one or multiple sensors, allowing to improve the resolution of the images and increase the interpretable content. In remote sensing a common fusion problem consists of merging hyperspectral (HS) and multispectral (MS) images that involve large amount of redundant data, which ignores the highly correlated structure of the datacube along the spatial and spectral dimensions. Compressive HS and MS systems compress the spectral data in the acquisition step allowing to reduce the data redundancy by using different sampling patterns. This work presents a compressed HS and MS image fusion approach, which uses a high dimensional joint sparse model. The joint sparse model is formulated by combining HS and MS compressive acquisition models. The high spectral and spatial resolution image is reconstructed by using sparse optimization algorithms. Different fusion spectral image scenarios are used to explore the performance of the proposed scheme. Several simulations with synthetic and real datacubes show promising results as the reliable reconstruction of a high spectral and spatial resolution image can be achieved by using as few as just the 50% of the datacube.

  9. Directly Estimating Endmembers for Compressive Hyperspectral Images

    PubMed Central

    Xu, Hongwei; Fu, Ning; Qiao, Liyan; Peng, Xiyuan

    2015-01-01

    The large volume of hyperspectral images (HSI) generated creates huge challenges for transmission and storage, making data compression more and more important. Compressive Sensing (CS) is an effective data compression technology that shows that when a signal is sparse in some basis, only a small number of measurements are needed for exact signal recovery. Distributed CS (DCS) takes advantage of both intra- and inter- signal correlations to reduce the number of measurements needed for multichannel-signal recovery. HSI can be observed by the DCS framework to reduce the volume of data significantly. The traditional method for estimating endmembers (spectral information) first recovers the images from the compressive HSI and then estimates endmembers via the recovered images. The recovery step takes considerable time and introduces errors into the estimation step. In this paper, we propose a novel method, by designing a type of coherent measurement matrix, to estimate endmembers directly from the compressively observed HSI data via convex geometry (CG) approaches without recovering the images. Numerical simulations show that the proposed method outperforms the traditional method with better estimation speed and better (or comparable) accuracy in both noisy and noiseless cases. PMID:25905699

  10. [Hyperspectral image compression technology research based on EZW].

    PubMed

    Wei, Jun-Xia; Xiangli, Bin; Duan, Xiao-Feng; Xu, Zhao-Hui; Xue, Li-Jun

    2011-08-01

    Along with the development of hyperspectral remote sensing technology, hyperspectral imaging technology has been applied in the aspect of aviation and spaceflight, which is different from multispectral imaging, and with the band width of nanoscale spectral imaging the target continuously, the image resolution is very high. However, with the increasing number of band, spectral data quantity will be more and more, and these data storage and transmission is the problem that the authors must face. Along with the development of wavelet compression technology, in field of image compression, many people adopted and improved EZW, the present paper used the method in hyperspectral spatial dimension compression, but does not involved the spectrum dimension compression. From hyperspectral image compression reconstruction results, whether from the peak signal-to-noise ratio (PSNR) and spectral curve or from the subjective comparison of source and reconstruction image, the effect is well. If the first compression of image from spectrum dimension is made, then compression on space dimension, the authors believe the effect will be better.

  11. Context Modeler for Wavelet Compression of Spectral Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Kiely, Aaron; Xie, Hua; Klimesh, matthew; Aranki, Nazeeh

    2010-01-01

    A context-modeling sub-algorithm has been developed as part of an algorithm that effects three-dimensional (3D) wavelet-based compression of hyperspectral image data. The context-modeling subalgorithm, hereafter denoted the context modeler, provides estimates of probability distributions of wavelet-transformed data being encoded. These estimates are utilized by an entropy coding subalgorithm that is another major component of the compression algorithm. The estimates make it possible to compress the image data more effectively than would otherwise be possible. The following background discussion is prerequisite to a meaningful summary of the context modeler. This discussion is presented relative to ICER-3D, which is the name attached to a particular compression algorithm and the software that implements it. The ICER-3D software is summarized briefly in the preceding article, ICER-3D Hyperspectral Image Compression Software (NPO-43238). Some aspects of this algorithm were previously described, in a slightly more general context than the ICER-3D software, in "Improving 3D Wavelet-Based Compression of Hyperspectral Images" (NPO-41381), NASA Tech Briefs, Vol. 33, No. 3 (March 2009), page 7a. In turn, ICER-3D is a product of generalization of ICER, another previously reported algorithm and computer program that can perform both lossless and lossy wavelet-based compression and decompression of gray-scale-image data. In ICER-3D, hyperspectral image data are decomposed using a 3D discrete wavelet transform (DWT). Following wavelet decomposition, mean values are subtracted from spatial planes of spatially low-pass subbands prior to encoding. The resulting data are converted to sign-magnitude form and compressed. In ICER-3D, compression is progressive, in that compressed information is ordered so that as more of the compressed data stream is received, successive reconstructions of the hyperspectral image data are of successively higher overall fidelity.

  12. A Framework of Hyperspectral Image Compression using Neural Networks

    SciTech Connect

    Masalmah, Yahya M.; Martínez Nieves, Christian; Rivera Soto, Rafael; Velez, Carlos; Gonzalez, Jenipher

    2015-01-01

    Hyperspectral image analysis has gained great attention due to its wide range of applications. Hyperspectral images provide a vast amount of information about underlying objects in an image by using a large range of the electromagnetic spectrum for each pixel. However, since the same image is taken multiple times using distinct electromagnetic bands, the size of such images tend to be significant, which leads to greater processing requirements. The aim of this paper is to present a proposed framework for image compression and to study the possible effects of spatial compression on quality of unmixing results. Image compression allows us to reduce the dimensionality of an image while still preserving most of the original information, which could lead to faster image processing. Lastly, this paper presents preliminary results of different training techniques used in Artificial Neural Network (ANN) based compression algorithm.

  13. A Framework of Hyperspectral Image Compression using Neural Networks

    DOE PAGES

    Masalmah, Yahya M.; Martínez Nieves, Christian; Rivera Soto, Rafael; ...

    2015-01-01

    Hyperspectral image analysis has gained great attention due to its wide range of applications. Hyperspectral images provide a vast amount of information about underlying objects in an image by using a large range of the electromagnetic spectrum for each pixel. However, since the same image is taken multiple times using distinct electromagnetic bands, the size of such images tend to be significant, which leads to greater processing requirements. The aim of this paper is to present a proposed framework for image compression and to study the possible effects of spatial compression on quality of unmixing results. Image compression allows usmore » to reduce the dimensionality of an image while still preserving most of the original information, which could lead to faster image processing. Lastly, this paper presents preliminary results of different training techniques used in Artificial Neural Network (ANN) based compression algorithm.« less

  14. [Lossless compression of hyperspectral image for space-borne application].

    PubMed

    Li, Jin; Jin, Long-xu; Li, Guo-ning

    2012-08-01

    In order to resolve the difficulty in hardware implementation, lower compression ratio and time consuming for the whole hyperspectral image lossless compression algorithm based on the prediction, transform, vector quantization and their combination, a hyperspectral image lossless compression algorithm for space-borne application was proposed in the present paper. Firstly, intra-band prediction is used only for the first image along the spectral line using a median predictor. And inter- band prediction is applied to other band images. A two-step and bidirectional prediction algorithm is proposed for the inter-band prediction. In the first step prediction, a bidirectional and second order predictor proposed is used to obtain a prediction reference value. And a improved LUT prediction algorithm proposed is used to obtain four values of LUT prediction. Then the final prediction is obtained through comparison between them and the prediction reference. Finally, the verification experiments for the compression algorithm proposed using compression system test equipment of XX-X space hyperspectral camera were carried out. The experiment results showed that compression system can be fast and stable work. The average compression ratio reached 3.05 bpp. Compared with traditional approaches, the proposed method could improve the average compression ratio by 0.14-2.94 bpp. They effectively improve the lossless compression ratio and solve the difficulty of hardware implementation of the whole wavelet-based compression scheme.

  15. Spectral Ringing Artifacts in Hyperspectral Image Data Compression

    NASA Astrophysics Data System (ADS)

    Klimesh, M.; Kiely, A.; Xie, H.; Aranki, N.

    2005-02-01

    When a three-dimensional wavelet decomposition is used for compression of hyperspectral images, spectral ringing artifacts can arise, manifesting themselves as systematic biases in some reconstructed spectral bands. More generally, systematic differences in signal level in different spectral bands can hurt compression effectiveness of spatially low-pass subbands. The mechanism by which this occurs is described in the context of ICER-3D, a hyperspectral imagery extension of the ICER image compressor. Methods of mitigating or eliminating the detrimental effects of systematic band-dependent signal levels are proposed and discussed, and results are presented.

  16. Lossless compression of hyperspectral images using hybrid context prediction.

    PubMed

    Liang, Yuan; Li, Jianping; Guo, Ke

    2012-03-26

    In this letter a new algorithm for lossless compression of hyperspectral images using hybrid context prediction is proposed. Lossless compression algorithms are typically divided into two stages, a decorrelation stage and a coding stage. The decorrelation stage supports both intraband and interband predictions. The intraband (spatial) prediction uses the median prediction model, since the median predictor is fast and efficient. The interband prediction uses hybrid context prediction. The hybrid context prediction is the combination of a linear prediction (LP) and a context prediction. Finally, the residual image of hybrid context prediction is coded by the arithmetic coding. We compare the proposed lossless compression algorithm with some of the existing algorithms for hyperspectral images such as 3D-CALIC, M-CALIC, LUT, LAIS-LUT, LUT-NN, DPCM (C-DPCM), JPEG-LS. The performance of the proposed lossless compression algorithm is evaluated. Simulation results show that our algorithm achieves high compression ratios with low complexity and computational cost.

  17. Preprocessing and compression of Hyperspectral images captured onboard UAVs

    NASA Astrophysics Data System (ADS)

    Herrero, Rolando; Cadirola, Martin; Ingle, Vinay K.

    2015-10-01

    Advancements in image sensors and signal processing have led to the successful development of lightweight hyperspectral imaging systems that are critical to the deployment of Photometry and Remote Sensing (PaRS) capabilities in unmanned aerial vehicles (UAVs). In general, hyperspectral data cubes include a few dozens of spectral bands that are extremely useful for remote sensing applications that range from detection of land vegetation to monitoring of atmospheric products derived from the processing of lower level radiance images. Because these data cubes are captured in the challenging environment of UAVs, where resources are limited, source encoding by means of compression is a fundamental mechanism that considerably improves the overall system performance and reliability. In this paper, we focus on the hyperspectral images captured by a state-of-the-art commercial hyperspectral camera by showing the results of applying ultraspectral data compression to the obtained data set. Specifically the compression scheme that we introduce integrates two stages; (1) preprocessing and (2) compression itself. The outcomes of this procedure are linear prediction coefficients and an error signal that, when encoded, results in a compressed version of the original image. Second, preprocessing and compression algorithms are optimized and have their time complexity analyzed to guarantee their successful deployment using low power ARM based embedded processors in the context of UAVs. Lastly, we compare the proposed architecture against other well known schemes and show how the compression scheme presented in this paper outperforms all of them by providing substantial improvement and delivering both lower compression rates and lower distortion.

  18. Target-driven selection of lossy hyperspectral image compression ratios

    NASA Astrophysics Data System (ADS)

    Kaufman, Jason R.; McGuinness, Christopher D.

    2017-05-01

    A common problem in applying lossy compression to a hyperspectral image is predicting its effect on spectral target detection performance. Recent work has shown that light amounts of lossy compression can remove noise in hyperspectral imagery that would otherwise bias a covariance-based spectral target detection algorithm's background-normalized response to target samples. However, the detection performance of such an algorithm is a function of both the specific target of interest as well as the background, among other factors, and therefore sometimes lossy compression operating at a particular compression ratio (CR) will not negatively affect the detection of one target, while it will negatively affect the detection of another. To account for the variability in this behavior, we have developed a target-centric metric that guides the selection of a lossy compression algorithm's CR without knowledge of whether or not the targets of interest are present in an image. Further, we show that this metric is correlated with the adaptive coherence estimator's (ACE's) signal to clutter ratio when targets are present in an image.

  19. Recent Advances in Compressed Sensing: Discrete Uncertainty Principles and Fast Hyperspectral Imaging

    DTIC Science & Technology

    2015-03-26

    medical imaging , e.g., magnetic resonance imaging (MRI). Since the early 1980s, MRI has granted doctors the ability to distinguish between healthy tissue ...Recent Advances in Compressed Sensing: Discrete Uncertainty Principles and Fast Hyperspectral Imaging THESIS MARCH 2015 Megan E. Lewis, Second...IN COMPRESSED SENSING: DISCRETE UNCERTAINTY PRINCIPLES AND FAST HYPERSPECTRAL IMAGING THESIS Presented to the Faculty Department of Mathematics and

  20. Improving 3D Wavelet-Based Compression of Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Klimesh, Matthew; Kiely, Aaron; Xie, Hua; Aranki, Nazeeh

    2009-01-01

    Two methods of increasing the effectiveness of three-dimensional (3D) wavelet-based compression of hyperspectral images have been developed. (As used here, images signifies both images and digital data representing images.) The methods are oriented toward reducing or eliminating detrimental effects of a phenomenon, referred to as spectral ringing, that is described below. In 3D wavelet-based compression, an image is represented by a multiresolution wavelet decomposition consisting of several subbands obtained by applying wavelet transforms in the two spatial dimensions corresponding to the two spatial coordinate axes of the image plane, and by applying wavelet transforms in the spectral dimension. Spectral ringing is named after the more familiar spatial ringing (spurious spatial oscillations) that can be seen parallel to and near edges in ordinary images reconstructed from compressed data. These ringing phenomena are attributable to effects of quantization. In hyperspectral data, the individual spectral bands play the role of edges, causing spurious oscillations to occur in the spectral dimension. In the absence of such corrective measures as the present two methods, spectral ringing can manifest itself as systematic biases in some reconstructed spectral bands and can reduce the effectiveness of compression of spatially-low-pass subbands. One of the two methods is denoted mean subtraction. The basic idea of this method is to subtract mean values from spatial planes of spatially low-pass subbands prior to encoding, because (a) such spatial planes often have mean values that are far from zero and (b) zero-mean data are better suited for compression by methods that are effective for subbands of two-dimensional (2D) images. In this method, after the 3D wavelet decomposition is performed, mean values are computed for and subtracted from each spatial plane of each spatially-low-pass subband. The resulting data are converted to sign-magnitude form and compressed in a

  1. Compressive Hyperspectral Imaging and Anomaly Detection

    DTIC Science & Technology

    2013-03-01

    simple, yet effective method of using the spatial information to increase the accuracy of target detection. The idea is to apply TV denoising [4] to the...a zero value, and isolated false alarm pixels are usually eliminated by the TV denoising algorithm. 2 2.1.1 TV Denoising Here we briefly describe the...total variation denoising model[4] we use in the above. Given an image I ∈ R2, we solve the following L1 minimization problem to denoise the image

  2. Development of a compressive sampling hyperspectral imager prototype

    NASA Astrophysics Data System (ADS)

    Barducci, Alessandro; Guzzi, Donatella; Lastri, Cinzia; Nardino, Vanni; Marcoionni, Paolo; Pippi, Ivan

    2013-10-01

    Compressive sensing (CS) is a new technology that investigates the chance to sample signals at a lower rate than the traditional sampling theory. The main advantage of CS is that compression takes place during the sampling phase, making possible significant savings in terms of the ADC, data storage memory, down-link bandwidth, and electrical power absorption. The CS technology could have primary importance for spaceborne missions and technology, paving the way to noteworthy reductions of payload mass, volume, and cost. On the contrary, the main CS disadvantage is made by the intensive off-line data processing necessary to obtain the desired source estimation. In this paper we summarize the CS architecture and its possible implementations for Earth observation, giving evidence of possible bottlenecks hindering this technology. CS necessarily employs a multiplexing scheme, which should produce some SNR disadvantage. Moreover, this approach would necessitate optical light modulators and 2-dim detector arrays of high frame rate. This paper describes the development of a sensor prototype at laboratory level that will be utilized for the experimental assessment of CS performance and the related reconstruction errors. The experimental test-bed adopts a push-broom imaging spectrometer, a liquid crystal plate, a standard CCD camera and a Silicon PhotoMultiplier (SiPM) matrix. The prototype is being developed within the framework of the ESA ITI-B Project titled "Hyperspectral Passive Satellite Imaging via Compressive Sensing".

  3. Real-time lossy compression of hyperspectral images using iterative error analysis on graphics processing units

    NASA Astrophysics Data System (ADS)

    Sánchez, Sergio; Plaza, Antonio

    2012-06-01

    Hyperspectral image compression is an important task in remotely sensed Earth Observation as the dimensionality of this kind of image data is ever increasing. This requires on-board compression in order to optimize the donwlink connection when sending the data to Earth. A successful algorithm to perform lossy compression of remotely sensed hyperspectral data is the iterative error analysis (IEA) algorithm, which applies an iterative process which allows controlling the amount of information loss and compression ratio depending on the number of iterations. This algorithm, which is based on spectral unmixing concepts, can be computationally expensive for hyperspectral images with high dimensionality. In this paper, we develop a new parallel implementation of the IEA algorithm for hyperspectral image compression on graphics processing units (GPUs). The proposed implementation is tested on several different GPUs from NVidia, and is shown to exhibit real-time performance in the analysis of an Airborne Visible Infra-Red Imaging Spectrometer (AVIRIS) data sets collected over different locations. The proposed algorithm and its parallel GPU implementation represent a significant advance towards real-time onboard (lossy) compression of hyperspectral data where the quality of the compression can be also adjusted in real-time.

  4. Toward prediction of hyperspectral target detection performance after lossy image compression

    NASA Astrophysics Data System (ADS)

    Kaufman, Jason R.; Vongsy, Karmon M.; Dill, Jeffrey C.

    2016-05-01

    Hyperspectral imagery (HSI) offers numerous advantages over traditional sensing modalities with its high spectral content that allows for classification, anomaly detection, target discrimination, and change detection. However, this imaging modality produces a huge amount of data, which requires transmission, processing, and storage resources; hyperspectral compression is a viable solution to these challenges. It is well known that lossy compression of hyperspectral imagery can impact hyperspectral target detection. Here we examine lossy compressed hyperspectral imagery from data-centric and target-centric perspectives. The compression ratio (CR), root mean square error (RMSE), the signal to noise ratio (SNR), and the correlation coefficient are computed directly from the imagery and provide insight to how the imagery has been affected by the lossy compression process. With targets present in the imagery, we perform target detection with the spectral angle mapper (SAM) and adaptive coherence estimator (ACE) and evaluate the change in target detection performance by examining receiver operating characteristic (ROC) curves and the target signal-to-clutter ratio (SCR). Finally, we observe relationships between the data- and target-centric metrics for selected visible/near-infrared to shortwave infrared (VNIR/SWIR) HSI data, targets, and backgrounds that motivate potential prediction of change in target detection performance as a function of compression ratio.

  5. Distributed Compressive Sensing of Hyperspectral Images Using Low Rank and Structure Similarity Property

    NASA Astrophysics Data System (ADS)

    Huang, Bingchao; Xu, Ke; Wan, Jianwei; Liu, Xu

    2015-11-01

    An efficient method and system for distributed compressive sensing of hyperspectral images is presented, which exploit the low rank and structure similarity property of hyperspectral imagery. In this paper, by integrating the respective characteristics of DSC and CS, a distributed compressive sensing framework is proposed to simultaneously capture and compress hyperspectral images. At the encoder, every band image is measured independently, where almost all computation burdens can be shifted to the decoder, resulting in a very low-complexity encoder. It is simple to operate and easy to hardware implementation. At the decoder, each band image is reconstructed by the method of total variation norm minimize. During each band reconstruction, the low rand structure of band images and spectrum structure similarity are used to give birth to the new regularizers. With combining the new regularizers and other regularizer, we can sufficiently exploit the spatial correlation, spectral correlation and spectral structural redundancy in hyperspectral imagery. A numerical optimization algorithm is also proposed to solve the reconstruction model by augmented Lagrangian multiplier method. Experimental results show that this method can effectively improve the reconstruction quality of hyperspectral images.

  6. Lossless compression of hyperspectral images using C-DPCM-APL with reference bands selection

    NASA Astrophysics Data System (ADS)

    Wang, Keyan; Liao, Huilin; Li, Yunsong; Zhang, Shanshan; Wu, Xianyun

    2014-05-01

    The availability of hyperspectral images has increased in recent years, which is used in military and civilian applications, such as target recognition, surveillance, geological mapping and environmental monitoring. Because of its abundant data quantity and special importance, now it exists lossless compression methods of hyperspectral images mainly exploiting the strong spatial or spectral correlation. C-DPCM-APL is a method that achieves highest lossless compression ratio on the CCSDS hyperspectral images acquired in 2006 but consuming longest processing time among existing lossless compression methods to determine the optimal prediction length for each band. C-DPCM-APL gets best compression performance mainly via using optimal prediction length but ignoring the correlationship between reference bands and the current band which is a crucial factor that influences the precision of prediction. Considering this, we propose a method that selects reference bands according to the atmospheric absorption characteristic of hyperspectral images. Experiments on CCSDS 2006 images data set show that the proposed reduces the computation complexity heavily without decaying its lossless compression performance when compared to C-DPCM-APL.

  7. Hyperspectral image compression: adapting SPIHT and EZW to anisotropic 3-D wavelet coding.

    PubMed

    Christophe, Emmanuel; Mailhes, Corinne; Duhamel, Pierre

    2008-12-01

    Hyperspectral images present some specific characteristics that should be used by an efficient compression system. In compression, wavelets have shown a good adaptability to a wide range of data, while being of reasonable complexity. Some wavelet-based compression algorithms have been successfully used for some hyperspectral space missions. This paper focuses on the optimization of a full wavelet compression system for hyperspectral images. Each step of the compression algorithm is studied and optimized. First, an algorithm to find the optimal 3-D wavelet decomposition in a rate-distortion sense is defined. Then, it is shown that a specific fixed decomposition has almost the same performance, while being more useful in terms of complexity issues. It is shown that this decomposition significantly improves the classical isotropic decomposition. One of the most useful properties of this fixed decomposition is that it allows the use of zero tree algorithms. Various tree structures, creating a relationship between coefficients, are compared. Two efficient compression methods based on zerotree coding (EZW and SPIHT) are adapted on this near-optimal decomposition with the best tree structure found. Performances are compared with the adaptation of JPEG 2000 for hyperspectral images on six different areas presenting different statistical properties.

  8. A linear mixture analysis-based compression for hyperspectral image analysis

    SciTech Connect

    C. I. Chang; I. W. Ginsberg

    2000-06-30

    In this paper, the authors present a fully constrained least squares linear spectral mixture analysis-based compression technique for hyperspectral image analysis, particularly, target detection and classification. Unlike most compression techniques that directly deal with image gray levels, the proposed compression approach generates the abundance fractional images of potential targets present in an image scene and then encodes these fractional images so as to achieve data compression. Since the vital information used for image analysis is generally preserved and retained in the abundance fractional images, the loss of information may have very little impact on image analysis. In some occasions, it even improves analysis performance. Airborne visible infrared imaging spectrometer (AVIRIS) data experiments demonstrate that it can effectively detect and classify targets while achieving very high compression ratios.

  9. Hyperspectral images lossless compression using the 3D binary EZW algorithm

    NASA Astrophysics Data System (ADS)

    Cheng, Kai-jen; Dill, Jeffrey

    2013-02-01

    This paper presents a transform based lossless compression for hyperspectral images which is inspired by Shapiro (1993)'s EZW algorithm. The proposed compression method uses a hybrid transform which includes an integer Karhunrn-Loeve transform (KLT) and integer discrete wavelet transform (DWT). The integer KLT is employed to eliminate the presence of correlations among the bands of the hyperspectral image. The integer 2D discrete wavelet transform (DWT) is applied to eliminate the correlations in the spatial dimensions and produce wavelet coefficients. These coefficients are then coded by a proposed binary EZW algorithm. The binary EZW eliminates the subordinate pass of conventional EZW by coding residual values, and produces binary sequences. The binary EZW algorithm combines the merits of well-known EZW and SPIHT algorithms, and it is computationally simpler for lossless compression. The proposed method was applied to AVIRIS images and compared to other state-of-the-art image compression techniques. The results show that the proposed lossless image compression is more efficient and it also has higher compression ratio than other algorithms.

  10. Super-resolution reconstruction of hyperspectral images using empirical mode decomposition and compressed sensing

    NASA Astrophysics Data System (ADS)

    Ziyong, Zhou

    2016-10-01

    Hyperspectral remote sensing provides the possibility of direct detection of material information; however, coarse spatial resolution can restrict the scope of its application. The super-resolution (SR) technique can overcome this problem, but the separate application of SR reconstruction to each spectral band is computationally intensive. We proposed an approach that combines empirical mode decomposition (EMD), single-image SR reconstruction using compressed sensing (CS), and principal component analysis (PCA). EMD was used to extract details from within the images, whereas PCA was implemented to reduce the spectral dimensions of the hyperspectral image cube and to retain meaningful spectral information. The CS-based single-image SR reconstruction involved the use of both the K-SVD algorithm for learning and obtaining an over-complete dictionary, and the orthogonal matching pursuit algorithm for the image reconstruction. Experimental results obtained using an EO-1 hyperion image were used to validate the proposed approach.

  11. Hardware Implementation of Lossless Adaptive Compression of Data From a Hyperspectral Imager

    NASA Technical Reports Server (NTRS)

    Keymeulen, Didlier; Aranki, Nazeeh I.; Klimesh, Matthew A.; Bakhshi, Alireza

    2012-01-01

    Efficient onboard data compression can reduce the data volume from hyperspectral imagers on NASA and DoD spacecraft in order to return as much imagery as possible through constrained downlink channels. Lossless compression is important for signature extraction, object recognition, and feature classification capabilities. To provide onboard data compression, a hardware implementation of a lossless hyperspectral compression algorithm was developed using a field programmable gate array (FPGA). The underlying algorithm is the Fast Lossless (FL) compression algorithm reported in Fast Lossless Compression of Multispectral- Image Data (NPO-42517), NASA Tech Briefs, Vol. 30, No. 8 (August 2006), p. 26 with the modification reported in Lossless, Multi-Spectral Data Comressor for Improved Compression for Pushbroom-Type Instruments (NPO-45473), NASA Tech Briefs, Vol. 32, No. 7 (July 2008) p. 63, which provides improved compression performance for data from pushbroom-type imagers. An FPGA implementation of the unmodified FL algorithm was previously developed and reported in Fast and Adaptive Lossless Onboard Hyperspectral Data Compression System (NPO-46867), NASA Tech Briefs, Vol. 36, No. 5 (May 2012) p. 42. The essence of the FL algorithm is adaptive linear predictive compression using the sign algorithm for filter adaption. The FL compressor achieves a combination of low complexity and compression effectiveness that exceeds that of stateof- the-art techniques currently in use. The modification changes the predictor structure to tolerate differences in sensitivity of different detector elements, as occurs in pushbroom-type imagers, which are suitable for spacecraft use. The FPGA implementation offers a low-cost, flexible solution compared to traditional ASIC (application specific integrated circuit) and can be integrated as an intellectual property (IP) for part of, e.g., a design that manages the instrument interface. The FPGA implementation was benchmarked on the Xilinx

  12. Adaptive Nonlocal Sparse Representation for Dual-Camera Compressive Hyperspectral Imaging.

    PubMed

    Wang, Lizhi; Xiong, Zhiwei; Shi, Guangming; Wu, Feng; Zeng, Wenjun

    2016-10-25

    Leveraging the compressive sensing (CS) theory, coded aperture snapshot spectral imaging (CASSI) provides an efficient solution to recover 3D hyperspectral data from a 2D measurement. The dual-camera design of CASSI, by adding an uncoded panchromatic measurement, enhances the reconstruction fidelity while maintaining the snapshot advantage. In this paper, we propose an adaptive nonlocal sparse representation (ANSR) model to boost the performance of dualcamera compressive hyperspectral imaging (DCCHI). Specifically, the CS reconstruction problem is formulated as a 3D cube based sparse representation to make full use of the nonlocal similarity in both the spatial and spectral domains. Our key observation is that, the panchromatic image, besides playing the role of direct measurement, can be further exploited to help the nonlocal similarity estimation. Therefore, we design a joint similarity metric by adaptively combining the internal similarity within the reconstructed hyperspectral image and the external similarity within the panchromatic image. In this way, the fidelity of CS reconstruction is greatly enhanced. Both simulation and hardware experimental results show significant improvement of the proposed method over the state-of-the-art.

  13. A DMD-based hyperspectral imaging system using compressive sensing method

    NASA Astrophysics Data System (ADS)

    Sun, Zhongqiu; Chen, Bo; Cheng, Chengqi

    2014-11-01

    Hyperspectral Imaging Systems (HIS) are widely applied in many fields. However, in the traditional design of HIS, it is much time-consuming to acquire an integrated hyperspectral image. Compressive sensing is an efficient method to process sparse data, and a single-pixel camera which used the digital micromirror device (DMD) for accomplishing the CS algorithms had been developed. Nowadays, DMD achieved great development. The size of mirror array is increasing while switch speed of a single mirror becomes very fast. Consequently, researchers make efforts to design a HIS using CS method. CS method is a method to scale down the spatial information but the hyperspectral datacubes are still huge because of the thousands of bands. In this paper, we design a DMD-based spectrometer architecture using the method of compressed sensing principle, combined with DMD's spectral filter characteristics. In the new architecture, there are two DMDs. One is used for implementing the CS pattern, the other for filtering the bands. It has spectral simply adjustable advantages. With this new technology, we can reduce the amount of information which needs to be transmitted and processed in both spatial and spectral domain. We also present some simulation results of implementation procedures.

  14. Lossless compression of hyperspectral images using conventional recursive least-squares predictor with adaptive prediction bands

    NASA Astrophysics Data System (ADS)

    Gao, Fang; Guo, Shuxu

    2016-01-01

    An efficient lossless compression scheme for hyperspectral images using conventional recursive least-squares (CRLS) predictor with adaptive prediction bands is proposed. The proposed scheme first calculates the preliminary estimates to form the input vector of the CRLS predictor. Then the number of bands used in prediction is adaptively selected by an exhaustive search for the number that minimizes the prediction residual. Finally, after prediction, the prediction residuals are sent to an adaptive arithmetic coder. Experiments on the newer airborne visible/infrared imaging spectrometer (AVIRIS) images in the consultative committee for space data systems (CCSDS) test set show that the proposed scheme yields an average compression performance of 3.29 (bits/pixel), 5.57 (bits/pixel), and 2.44 (bits/pixel) on the 16-bit calibrated images, the 16-bit uncalibrated images, and the 12-bit uncalibrated images, respectively. Experimental results demonstrate that the proposed scheme obtains compression results very close to clustered differential pulse code modulation-with-adaptive-prediction-length, which achieves best lossless compression performance for AVIRIS images in the CCSDS test set, and outperforms other current state-of-the-art schemes with relatively low computation complexity.

  15. ROI-Based On-Board Compression for Hyperspectral Remote Sensing Images on GPU.

    PubMed

    Giordano, Rossella; Guccione, Pietro

    2017-05-19

    In recent years, hyperspectral sensors for Earth remote sensing have become very popular. Such systems are able to provide the user with images having both spectral and spatial information. The current hyperspectral spaceborne sensors are able to capture large areas with increased spatial and spectral resolution. For this reason, the volume of acquired data needs to be reduced on board in order to avoid a low orbital duty cycle due to limited storage space. Recently, literature has focused the attention on efficient ways for on-board data compression. This topic is a challenging task due to the difficult environment (outer space) and due to the limited time, power and computing resources. Often, the hardware properties of Graphic Processing Units (GPU) have been adopted to reduce the processing time using parallel computing. The current work proposes a framework for on-board operation on a GPU, using NVIDIA's CUDA (Compute Unified Device Architecture) architecture. The algorithm aims at performing on-board compression using the target's related strategy. In detail, the main operations are: the automatic recognition of land cover types or detection of events in near real time in regions of interest (this is a user related choice) with an unsupervised classifier; the compression of specific regions with space-variant different bit rates including Principal Component Analysis (PCA), wavelet and arithmetic coding; and data volume management to the Ground Station. Experiments are provided using a real dataset taken from an AVIRIS (Airborne Visible/Infrared Imaging Spectrometer) airborne sensor in a harbor area.

  16. New algorithm for lossless hyper-spectral image compression with mixing transform to eliminate redundancy

    NASA Astrophysics Data System (ADS)

    Xie, ChengJun; Xu, Lin

    2008-03-01

    This paper presents a new algorithm based on mixing transform to eliminate redundancy, SHIRCT and subtraction mixing transform is used to eliminate spectral redundancy, 2D-CDF(2,2)DWT to eliminate spatial redundancy, This transform has priority in hardware realization convenience, since it can be fully implemented by add and shift operation. Its redundancy elimination effect is better than (1D+2D)CDF(2,2)DWT. Here improved SPIHT+CABAC mixing compression coding algorithm is used to implement compression coding. The experiment results show that in lossless image compression applications the effect of this method is a little better than the result acquired using (1D+2D)CDF(2,2)DWT+improved SPIHT+CABAC, still it is much better than the results acquired by JPEG-LS, WinZip, ARJ, DPCM, the research achievements of a research team of Chinese Academy of Sciences, NMST and MST. Using hyper-spectral image Canal of American JPL laboratory as the data set for lossless compression test, on the average the compression ratio of this algorithm exceeds the above algorithms by 42%,37%,35%,30%,16%,13%,11% respectively.

  17. Lossy to lossless compressions of hyperspectral images using three-dimensional set partitioning algorithm

    NASA Astrophysics Data System (ADS)

    Wu, Jiaji; Wu, Zhensen; Wu, Chengke

    2006-02-01

    We present a three-dimensional (3-D) hyperspectral image compression algorithm based on zero-block coding and wavelet transforms. An efficient asymmetric 3-D wavelet transform (AT) based on the lifting technique and packet transform is used to reduce redundancies in both the spectral and spatial dimensions. The implementation via 3-D integer lifting scheme enables us to map integer-to-integer values, enabling lossy and lossless decompression from the same bit stream. To encode these coefficients after the AT, a modified 3DSPECK algorithm-asymmetric transform 3-D set-partitioning embedded block (AT-3DSPECK) is proposed. According to the distribution of energy of the transformed coefficients, the 3DSPECK's 3-D set partitioning block algorithm and the 3-D octave band partitioning scheme are efficiently combined in the proposed AT-3DSPECK algorithm. Several AVIRIS (Airborne Visible/Infrared Imaging Spectrometer) images are used to evaluate the compression performance. Compared with the JPEG2000, AT-3DSPIHT, and 3DSPECK lossless compression techniques, the AT-3DSPECK achieves the best lossless performance. In lossy mode, the AT-3DSPECK algorithm outperforms AT-3DSPIHT and 3DSPECK at all rates. Besides the high compression performance, AT-3DSPECK supports progressive transmission. Clearly, the proposed AT-3DSPECK algorithm is a better candidate than several conventional methods.

  18. Multidimensional dictionary learning algorithm for compressive sensing-based hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Zhao, Rongqiang; Wang, Qiang; Shen, Yi; Li, Jia

    2016-11-01

    The sparsifying representation plays a significant role in compressive sensing (CS)-based hyperspectral (HS) imaging. Training the dictionaries for each dimension from HS samples is very beneficial to accurate reconstruction. However, the tensor dictionary learning algorithms are limited by a great amount of computation and convergence difficulties. We propose a least squares (LS) type multidimensional dictionary learning algorithm for CS-based HS imaging. We develop a practical method for the dictionary updating stage, which avoids the use of the Kronecker product and thus has lower computation complexity. To guarantee the convergence, we add a pruning stage to the algorithm to ensure the similarity and relativity among data in the spectral dimension. Our experimental results demonstrated that the dictionaries trained using the proposed algorithm performed better at CS-based HS image reconstruction than those trained with traditional LS-type dictionary learning algorithms and the commonly used analytical dictionaries.

  19. Speckle-based hyperspectral imaging combining multiple scattering and compressive sensing in nanowire mats

    NASA Astrophysics Data System (ADS)

    French, Rebecca; Gigan, Sylvain; Muskens, Otto L.

    2017-05-01

    Encoding of spectral information onto monochrome imaging cameras is of interest for wavelength multiplexing and hyperspectral imaging applications. Here, the complex spatio-spectral response of a disordered material is used to demonstrate retrieval of a number of discrete wavelengths over a wide spectral range. Strong, diffuse light scattering in a semiconductor nanowire mat is used to achieve a highly compact spectrometer of micrometer thickness, transforming different wavelengths into distinct speckle patterns with nanometer sensitivity. Spatial multiplexing is achieved through the use of a microlens array, allowing simultaneous imaging of many speckles, ultimately limited by the size of the diffuse spot area. The performance of different information retrieval algorithms is compared. A compressive sensing algorithm exhibits efficient reconstruction capability in noisy environments and with only a few measurements.

  20. Lossy to lossless compressions of hyperspectral images using three-dimensional set partitioning algorithm

    NASA Astrophysics Data System (ADS)

    Wu, Jiaji; Wu, Zhensen; Wu, Chengke

    2005-02-01

    In this paper, we present a three-dimensional (3D) hyperspectral image compression algorithm based on zeroblock coding and wavelet transforms. An efficient Asymmetric 3D wavelet Transform (AT) based on the lifting technique and packet transform is used to reduce redundancies in both the spectral and spatial dimensions. The implementation via 3D integer lifting scheme allows to map integer-to-integer values, enabling lossy and lossless decompression from the same bit stream. To encode these coefficients after Asymmetric 3D wavelet transform, a modified 3DSPECK algorithm - Asymmetric Transform 3D Set Partitioning Embedded bloCK (AT-3DSPECK) is proposed. According to the distribution of energy of the transformed coefficients, the 3DSPECK's 3D set partitioning block algorithm and the 3D octave band partitioning scheme are efficiently combined in the proposed AT-3DSPECK algorithm. Several AVIRIS images are used to evaluate the compression performance. Compared with the JPEG2000, AT-3DSPIHT and 3DSPECK lossless compression techniques, the AT-3DSPECK achieves the best lossless performance. In lossy mode, the AT-3DSPECK algorithm outperforms AT-3DSPIHT and 3DSPECK at all rates. Besides the high compression performance, AT-3DSPECK supports progressive transmission. Clearly, the proposed AT-3DSPECK algorithm is a better candidate than several conventional methods.

  1. Wavelet compression techniques for hyperspectral data

    NASA Technical Reports Server (NTRS)

    Evans, Bruce; Ringer, Brian; Yeates, Mathew

    1994-01-01

    Hyperspectral sensors are electro-optic sensors which typically operate in visible and near infrared bands. Their characteristic property is the ability to resolve a relatively large number (i.e., tens to hundreds) of contiguous spectral bands to produce a detailed profile of the electromagnetic spectrum. In contrast, multispectral sensors measure relatively few non-contiguous spectral bands. Like multispectral sensors, hyperspectral sensors are often also imaging sensors, measuring spectra over an array of spatial resolution cells. The data produced may thus be viewed as a three dimensional array of samples in which two dimensions correspond to spatial position and the third to wavelength. Because they multiply the already large storage/transmission bandwidth requirements of conventional digital images, hyperspectral sensors generate formidable torrents of data. Their fine spectral resolution typically results in high redundancy in the spectral dimension, so that hyperspectral data sets are excellent candidates for compression. Although there have been a number of studies of compression algorithms for multispectral data, we are not aware of any published results for hyperspectral data. Three algorithms for hyperspectral data compression are compared. They were selected as representatives of three major approaches for extending conventional lossy image compression techniques to hyperspectral data. The simplest approach treats the data as an ensemble of images and compresses each image independently, ignoring the correlation between spectral bands. The second approach transforms the data to decorrelate the spectral bands, and then compresses the transformed data as a set of independent images. The third approach directly generalizes two-dimensional transform coding by applying a three-dimensional transform as part of the usual transform-quantize-entropy code procedure. The algorithms studied all use the discrete wavelet transform. In the first two cases, a wavelet

  2. Compressed sensing of hyperspectral images based on scrambled block Hadamard ensemble

    NASA Astrophysics Data System (ADS)

    Wang, Li; Feng, Yan

    2016-11-01

    A fast measurement matrix based on scrambled block Hadamard ensemble for compressed sensing (CS) of hyperspectral images (HSI) is investigated. The proposed measurement matrix offers several attractive features. First, the proposed measurement matrix possesses Gaussian behavior, which illustrates that the matrix is universal and requires a near-optimal number of samples for exact reconstruction. In addition, it could be easily implemented in the optical domain due to its integer-valued elements. More importantly, the measurement matrix only needs small memory for storage in the sampling process. Experimental results on HSIs reveal that the reconstruction performance of the proposed measurement matrix is comparable or better than Gaussian matrix and Bernoulli matrix using different reconstruction algorithms while consuming less computational time. The proposed matrix could be used in CS of HSI, which would save the storage memory on board, improve the sampling efficiency, and ameliorate the reconstruction quality.

  3. Predictor analysis for onboard lossy predictive compression of multispectral and hyperspectral images

    NASA Astrophysics Data System (ADS)

    Ricci, Marco; Magli, Enrico

    2013-01-01

    The predictive lossy compression paradigm, which is emerging as an interesting alternative to conventional transform coding techniques, is studied. We first discuss this paradigm and outline the advantages and drawbacks with respect to transform coding. Next, we consider two low-complexity predictors and compare them under equal conditions on a large set of multispectral and hyperspectral images. Besides their rate-distortion performance, we attempt to gain some insight on the "quality" of the prediction residuals, comparing bit-rate and variance, and calculating the kurtosis. The results allow us to outline the directions for improvement of the algorithms, mainly in the treatment of noisy channels and the use of appropriate statistical models for the entropy-coding stage.

  4. GPU Lossless Hyperspectral Data Compression System

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh I.; Keymeulen, Didier; Kiely, Aaron B.; Klimesh, Matthew A.

    2014-01-01

    Hyperspectral imaging systems onboard aircraft or spacecraft can acquire large amounts of data, putting a strain on limited downlink and storage resources. Onboard data compression can mitigate this problem but may require a system capable of a high throughput. In order to achieve a high throughput with a software compressor, a graphics processing unit (GPU) implementation of a compressor was developed targeting the current state-of-the-art GPUs from NVIDIA(R). The implementation is based on the fast lossless (FL) compression algorithm reported in "Fast Lossless Compression of Multispectral-Image Data" (NPO- 42517), NASA Tech Briefs, Vol. 30, No. 8 (August 2006), page 26, which operates on hyperspectral data and achieves excellent compression performance while having low complexity. The FL compressor uses an adaptive filtering method and achieves state-of-the-art performance in both compression effectiveness and low complexity. The new Consultative Committee for Space Data Systems (CCSDS) Standard for Lossless Multispectral & Hyperspectral image compression (CCSDS 123) is based on the FL compressor. The software makes use of the highly-parallel processing capability of GPUs to achieve a throughput at least six times higher than that of a software implementation running on a single-core CPU. This implementation provides a practical real-time solution for compression of data from airborne hyperspectral instruments.

  5. Lossy compression of hyperspectral images using shearlet transform and 3D SPECK

    NASA Astrophysics Data System (ADS)

    Karami, A.

    2015-10-01

    In this paper, a new lossy compression method for hyperspectral images (HSI) is introduced. HSI are considered as a 3D dataset with two dimensions in the spatial and one dimension in the spectral domain. In the proposed method, first 3D multidirectional anisotropic shearlet transform is applied to the HSI. Because, unlike traditional wavelets, shearlets are theoretically optimal in representing images with edges and other geometrical features. Second, soft thresholding method is applied to the shearlet transform coefficients and finally the modified coefficients are encoded using Three Dimensional- Set Partitioned Embedded bloCK (3D SPECK). Our simulation results show that the proposed method, in comparison with well-known approaches such as 3D SPECK (using 3D wavelet) and combined PCA and JPEG2000 algorithms, provides a higher SNR (signal to noise ratio) for any given compression ratio (CR). It is noteworthy to mention that the superiority of proposed method is distinguishable as the value of CR grows. In addition, the effect of proposed method on the spectral unmixing analysis is also evaluated.

  6. Efficient lossy compression implementations of hyperspectral images: tools, hardware platforms, and comparisons

    NASA Astrophysics Data System (ADS)

    García, Aday; Santos, Lucana; López, Sebastián.; Callicó, Gustavo M.; Lopez, Jose F.; Sarmiento, Roberto

    2014-05-01

    Efficient onboard satellite hyperspectral image compression represents a necessity and a challenge for current and future space missions. Therefore, it is mandatory to provide hardware implementations for this type of algorithms in order to achieve the constraints required for onboard compression. In this work, we implement the Lossy Compression for Exomars (LCE) algorithm on an FPGA by means of high-level synthesis (HSL) in order to shorten the design cycle. Specifically, we use CatapultC HLS tool to obtain a VHDL description of the LCE algorithm from C-language specifications. Two different approaches are followed for HLS: on one hand, introducing the whole C-language description in CatapultC and on the other hand, splitting the C-language description in functional modules to be implemented independently with CatapultC, connecting and controlling them by an RTL description code without HLS. In both cases the goal is to obtain an FPGA implementation. We explain the several changes applied to the original Clanguage source code in order to optimize the results obtained by CatapultC for both approaches. Experimental results show low area occupancy of less than 15% for a SRAM-based Virtex-5 FPGA and a maximum frequency above 80 MHz. Additionally, the LCE compressor was implemented into an RTAX2000S antifuse-based FPGA, showing an area occupancy of 75% and a frequency around 53 MHz. All these serve to demonstrate that the LCE algorithm can be efficiently executed on an FPGA onboard a satellite. A comparison between both implementation approaches is also provided. The performance of the algorithm is finally compared with implementations on other technologies, specifically a graphics processing unit (GPU) and a single-threaded CPU.

  7. Time-resolved hyperspectral single-pixel camera implementation for compressive wide-field fluorescence lifetime imaging

    NASA Astrophysics Data System (ADS)

    Pian, Qi; Yao, Ruoyang; Intes, Xavier

    2016-03-01

    Single-pixel imaging based on compressive sensing theory has been a highlighted technique in the biomedical imaging field for many years. This interest has been driven by the possibility of performing microscopic or macroscopic imaging based on low-cost detector arrays, increased SNR (signal-to-noise ratio) in the acquired data sets and the ability to perform high quality image reconstruction with compressed data sets by exploiting signal sparsity. In this work, we present our recent work in implementing this technique to perform time domain fluorescence-labeled investigations in preclinical settings. More precisely, we report on our time-resolved hyperspectral single-pixel camera for fast, wide-field mapping of molecular labels and lifetime-based quantification. The hyperspectral single-pixel camera implements a DMD (Digital micro-mirror device) to generate optical masks for modulating the illumination field before it is delivered onto the sample and focuses the emission light signals into a multi-anode hyperspectral time-resolved PMT (Photomultiplier tube) to acquire spatial, temporal and spectral information enriched 4-D data sets. Fluorescence dyes with lifetime and spectral contrast are embedded in well plates and thin tissues. L-1 norm based regularization or the least square method, is applied to solve the underdetermined inverse problem during image reconstruction. These experimental results prove the possibility of fast, wide-field mapping of fluorescent labels with lifetime and spectral contrast in thin media.

  8. Fast compression implementation for hyperspectral sensor

    NASA Astrophysics Data System (ADS)

    Hihara, Hiroki; Yoshida, Jun; Ishida, Juro; Takada, Jun; Senda, Yuzo; Suzuki, Makoto; Seki, Taeko; Ichikawa, Satoshi; Ohgi, Nagamitsu

    2010-11-01

    Fast and small foot print lossless image compressors aiming at hyper-spectral sensor for the earth observation satellite have been developed. Since more than one hundred channels are required for hyper-spectral sensors on optical observation satellites, fast compression algorithm with small foot print implementation is essential for reducing encoder size and weight resulting in realizing light-weight and small-size sensor system. The image compression method should have low complexity in order to reduce size and weight of the sensor signal processing unit, power consumption and fabrication cost. Coding efficiency and compression speed enables enlargement of the capacity of signal compression channels, which resulted in reducing signal compression channels onboard by multiplexing sensor signal channels into reduced number of compression channels. The employed method is based on FELICS1, which is hierarchical predictive coding method with resolution scaling. To improve FELICS's performance of image decorrelation and entropy coding, we applied two-dimensional interpolation prediction and adaptive Golomb-Rice coding, which enables small footprint. It supports progressive decompression using resolution scaling, whilst still delivering superior performance as measured by speed and complexity. The small footprint circuitry is embedded into the hyper-spectral sensor data formatter. In consequence, lossless compression function has been added without additional size and weight.

  9. Hyperspectral image compression using low complexity integer KLT and three-dimensional asymmetric significance tree

    NASA Astrophysics Data System (ADS)

    Huang, Jing; Zhu, Rihong

    2009-08-01

    A lossy to lossless three-dimensional (3D) compression of hyperspectral images is presented. On the spectral dimension, a low complexity reversible integer Karhunen-Loève transform (KLT) is used to fully exploit the spectral redundancy, while two-dimensional spatial combinative lifting algorithm (SCLA)-based integer wavelet transform is applied on the spatial dimension. At the low complexity KLT, the calculation processing of covariance matrix is carried out on a subset of vectors that is pseudorandomly selected from the complete set of spectral vectors. The transform matrix is factorized into triangular elementary reversible matrices (TERM) for reversible integer mapping and the lifting scheme is applied to implement integer KLT. The 3D asymmetric significance tree structure is then constructed from the 3D asymmetric orientation tree in 3D transformed domain. Each coefficient is then encoded by the significance test of the 3D asymmetric significance tree node at each bitplane instead of ordered lists to track the significance status of the tree or block sets and coefficients. This algorithm has low complexity and can be applied to lossy to lossless progressive transmission.

  10. Hyperspectral image processing methods

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral image processing refers to the use of computer algorithms to extract, store and manipulate both spatial and spectral information contained in hyperspectral images across the visible and near-infrared portion of the electromagnetic spectrum. A typical hyperspectral image processing work...

  11. Hyperspectral imaging based on compressive sensing to determine cancer margins in human pancreatic tissue ex vivo

    NASA Astrophysics Data System (ADS)

    Peller, Joseph; Thompson, Kyle J.; Siddiqui, Imran; Martinie, John; Iannitti, David A.; Trammell, Susan R.

    2017-02-01

    Pancreatic cancer is the fourth leading cause of cancer death in the US. Currently, surgery is the only treatment that offers a chance of cure, however, accurately identifying tumor margins in real-time is difficult. Research has demonstrated that optical spectroscopy can be used to distinguish between healthy and diseased tissue. The design of a single-pixel imaging system for cancer detection is discussed. The system differentiates between healthy and diseased tissue based on differences in the optical reflectance spectra of these regions. In this study, pancreatic tissue samples from 6 patients undergoing Whipple procedures are imaged with the system (total number of tissue sample imaged was N=11). Regions of healthy and unhealthy tissue are determined based on SAM analysis of these spectral images. Hyperspectral imaging results are then compared to white light imaging and histological analysis. Cancerous regions were clearly visible in the hyperspectral images. Margins determined via spectral imaging were in good agreement with margins identified by histology, indicating that hyperspectral imaging system can differentiate between healthy and diseased tissue. After imaging the system was able to detect cancerous regions with a sensitivity of 74.50±5.89% and a specificity of 75.53±10.81%. Possible applications of this imaging system include determination of tumor margins during surgery/biopsy and assistance with cancer diagnosis and staging.

  12. Compressive and classical hyperspectral systems: a fundamental comparison

    NASA Astrophysics Data System (ADS)

    Shay, Adi; August, Isaac Y.; Stern, Adrian

    2015-05-01

    Hyperspectral imagery involves capturing and processing a tremendous amount of data, which sets severe system resource requirements. This has motivated the application of compressive sensing for different spectroscopic and spectroscopic imager systems. Several new compressive hyperspectral architectures have been designed to stretch the common limitations of classical systems. However, the application of the compressive sensing framework involves design of system architectures that differ significantly from the conventional ones. Since compressive sensing differs essentially from conventional sensing, it cannot be implemented for hyperspectral imaging by simply modifying one of the components of a conventional hyperspectral system, rather it requires a complete new design. In this work we present a comparison between four compressive hyperspectral architectures to conventional architectures. The compressive hyperspectral sensing compared are: Coded Aperture Snapshot Spectral Imaging (CASSI), Compressive HS Imaging by Separable Spatial And Spectral Operators (CHISSS), (Liquid-crystal Compressive spectral Imager) LiCSI and (Spectral Single-Pixel) SSP systems. Those methods are compared to conventional spatial/spectral scanning hyperspectral such as pushbroom, whiskbroom and color filter techniques. A fundamental comparison between these architectures is presented in terms of optical system volume and radiometric efficiency.

  13. Simultaneously sparse and low-rank hyperspectral image recovery from coded aperture compressive measurements via convex optimization

    NASA Astrophysics Data System (ADS)

    Gélvez, Tatiana C.; Rueda, Hoover F.; Arguello, Henry

    2016-05-01

    A hyperspectral image (HSI) can be described as a set of images with spatial information across different spectral bands. Compressive spectral imaging techniques (CSI) permit to capture a 3-dimensional hyperspectral scene using 2 dimensional coded and multiplexed projections. Recovering the original scene from a very few projections can be valuable in applications such as remote sensing, video surveillance and biomedical imaging. Typically, HSI exhibit high correlations both, in the spatial and spectral dimensions. Thus, exploiting these correlations allows to accurately recover the original scene from compressed measurements. Traditional approaches exploit the sparsity of the scene when represented in a proper basis. For this purpose, an optimization problem that seeks to minimize a joint l2 - l1 norm is solved to obtain the original scene. However, there exist some HSI with an important feature which does not have been widely exploited; HSI are commonly low rank, thus only a few number of spectral signatures are presented in the image. Therefore, this paper proposes an approach to recover a simultaneous sparse and low rank hyperspectral image by exploiting both features at the same time. The proposed approach solves an optimization problem that seeks to minimize the l2-norm, penalized by the l1-norm, to force the solution to be sparse, and penalized by the nuclear norm to force the solution to be low rank. Theoretical analysis along with a set of simulations over different data sets show that simultaneously exploiting low rank and sparse structures enhances the performance of the recovery algorithm and the quality of the recovered image with an average improvement of around 3 dB in terms of the peak-signal to noise ratio (PSNR).

  14. Real-Time Adaptive Lossless Hyperspectral Image Compression using CCSDS on Parallel GPGPU and Multicore Processor Systems

    NASA Technical Reports Server (NTRS)

    Hopson, Ben; Benkrid, Khaled; Keymeulen, Didier; Aranki, Nazeeh; Klimesh, Matt; Kiely, Aaron

    2012-01-01

    The proposed CCSDS (Consultative Committee for Space Data Systems) Lossless Hyperspectral Image Compression Algorithm was designed to facilitate a fast hardware implementation. This paper analyses that algorithm with regard to available parallelism and describes fast parallel implementations in software for GPGPU and Multicore CPU architectures. We show that careful software implementation, using hardware acceleration in the form of GPGPUs or even just multicore processors, can exceed the performance of existing hardware and software implementations by up to 11x and break the real-time barrier for the first time for a typical test application.

  15. Real-Time Adaptive Lossless Hyperspectral Image Compression using CCSDS on Parallel GPGPU and Multicore Processor Systems

    NASA Technical Reports Server (NTRS)

    Hopson, Ben; Benkrid, Khaled; Keymeulen, Didier; Aranki, Nazeeh; Klimesh, Matt; Kiely, Aaron

    2012-01-01

    The proposed CCSDS (Consultative Committee for Space Data Systems) Lossless Hyperspectral Image Compression Algorithm was designed to facilitate a fast hardware implementation. This paper analyses that algorithm with regard to available parallelism and describes fast parallel implementations in software for GPGPU and Multicore CPU architectures. We show that careful software implementation, using hardware acceleration in the form of GPGPUs or even just multicore processors, can exceed the performance of existing hardware and software implementations by up to 11x and break the real-time barrier for the first time for a typical test application.

  16. Compressive hyperspectral time-resolved wide-field fluorescence lifetime imaging

    NASA Astrophysics Data System (ADS)

    Pian, Qi; Yao, Ruoyang; Sinsuebphon, Nattawut; Intes, Xavier

    2017-07-01

    Spectrally resolved fluorescence lifetime imaging and spatial multiplexing have offered information content and collection-efficiency boosts in microscopy, but efficient implementations for macroscopic applications are still lacking. An imaging platform based on time-resolved structured light and hyperspectral single-pixel detection has been developed to perform quantitative macroscopic fluorescence lifetime imaging (MFLI) over a large field of view (FOV) and multiple spectral bands simultaneously. The system makes use of three digital micromirror device (DMD)-based spatial light modulators (SLMs) to generate spatial optical bases and reconstruct N by N images over 16 spectral channels with a time-resolved capability (∼40 ps temporal resolution) using fewer than N2 optical measurements. We demonstrate the potential of this new imaging platform by quantitatively imaging near-infrared (NIR) Förster resonance energy transfer (FRET) both in vitro and in vivo. The technique is well suited for quantitative hyperspectral lifetime imaging with a high sensitivity and paves the way for many important biomedical applications.

  17. Hyper-spectral image compression algorithm based on mixing transform of wave band grouping to eliminate redundancy

    NASA Astrophysics Data System (ADS)

    Xie, ChengJun; Xu, Lin

    2008-03-01

    This paper presents an algorithm based on mixing transform of wave band grouping to eliminate spectral redundancy, the algorithm adapts to the relativity difference between different frequency spectrum images, and still it works well when the band number is not the power of 2. Using non-boundary extension CDF(2,2)DWT and subtraction mixing transform to eliminate spectral redundancy, employing CDF(2,2)DWT to eliminate spatial redundancy and SPIHT+CABAC for compression coding, the experiment shows that a satisfied lossless compression result can be achieved. Using hyper-spectral image Canal of American JPL laboratory as the data set for lossless compression test, when the band number is not the power of 2, lossless compression result of this compression algorithm is much better than the results acquired by JPEG-LS, WinZip, ARJ, DPCM, the research achievements of a research team of Chinese Academy of Sciences, Minimum Spanning Tree and Near Minimum Spanning Tree, on the average the compression ratio of this algorithm exceeds the above algorithms by 41%,37%,35%,29%,16%,10%,8% respectively; when the band number is the power of 2, for 128 frames of the image Canal, taking 8, 16 and 32 respectively as the number of one group for groupings based on different numbers, considering factors like compression storage complexity, the type of wave band and the compression effect, we suggest using 8 as the number of bands included in one group to achieve a better compression effect. The algorithm of this paper has priority in operation speed and hardware realization convenience.

  18. Compressive hyperspectral sensor for LWIR gas detection

    NASA Astrophysics Data System (ADS)

    Russell, Thomas A.; McMackin, Lenore; Bridge, Bob; Baraniuk, Richard

    2012-06-01

    Focal plane arrays with associated electronics and cooling are a substantial portion of the cost, complexity, size, weight, and power requirements of Long-Wave IR (LWIR) imagers. Hyperspectral LWIR imagers add significant data volume burden as they collect a high-resolution spectrum at each pixel. We report here on a LWIR Hyperspectral Sensor that applies Compressive Sensing (CS) in order to achieve benefits in these areas. The sensor applies single-pixel detection technology demonstrated by Rice University. The single-pixel approach uses a Digital Micro-mirror Device (DMD) to reflect and multiplex the light from a random assortment of pixels onto the detector. This is repeated for a number of measurements much less than the total number of scene pixels. We have extended this architecture to hyperspectral LWIR sensing by inserting a Fabry-Perot spectrometer in the optical path. This compressive hyperspectral imager collects all three dimensions on a single detection element, greatly reducing the size, weight and power requirements of the system relative to traditional approaches, while also reducing data volume. The CS architecture also supports innovative adaptive approaches to sensing, as the DMD device allows control over the selection of spatial scene pixels to be multiplexed on the detector. We are applying this advantage to the detection of plume gases, by adaptively locating and concentrating target energy. A key challenge in this system is the diffraction loss produce by the DMD in the LWIR. We report the results of testing DMD operation in the LWIR, as well as system spatial and spectral performance.

  19. Multipurpose hyperspectral imaging system

    USDA-ARS?s Scientific Manuscript database

    A hyperspectral imaging system of high spectral and spatial resolution that incorporates several innovative features has been developed to incorporate a focal plane scanner (U.S. Patent 6,166,373). This feature enables the system to be used for both airborne/spaceborne and laboratory hyperspectral i...

  20. The research of hyperspectral image EBCOT lossless compression coding technology based on inter-spectrum adjustable parameter matrix reversible transform and intra-frame IDWT

    NASA Astrophysics Data System (ADS)

    Xie, Cheng-jun; Wei, Ying; Bi, Xin-wen; Li, Hui-zhu

    2009-10-01

    This paper presents a new reversible transform of inter-spectrum adjustable parameter matrix, which has better redundancy elimination effect by adjusting magnitude parameter λ and shift parameter δ to adjust transform matrix. Intraframe redundancy is eliminated by integer discrete wavelet transform (IDWT).These two kinds of transforms are all completed entirely by addition and shift, whose fast operation speed makes hardware implementation easier. After interspectrum and intra-frame transform, the hyper-spectral image is coded by improved EBCOT algorithm. Using hyper-spectral images Canal shot by AVIRIS of American JPL laboratory as test images, the experimental results show that in lossless image compression applications the method proposed in this paper is much better than the research results of MST, NIMST, a research team of Chinese Academy of Sciences, DPCMARJ, WinZip and JPEG-LS. The condition in which λ=7 and δ=3 in this paper, on the average the compression ratio using this algorithm increases by 11%, 15%, 18%, 31%, 36%, 38% and 43% respectively compared to the above algorithms. From the foregoing it follows that the algorithm presented in this paper is a very good hyper-spectral image lossless compression coding algorithm.

  1. Low-Complexity Adaptive Lossless Compression of Hyperspectral Imagery

    NASA Technical Reports Server (NTRS)

    Klimesh, Matthew

    2006-01-01

    A low-complexity, adaptive predictive technique for lossless compression of hyperspectral imagery is described. This technique is designed to be suitable for implementation in hardware such as a field programmable gate array (FPGA); such an implementation could be used for high-speed compression of hyperspectral imagery onboard a spacecraft. The predictive step of the technique makes use of the sign algorithm, which is a relative of the least mean square (LMS) algorithm from the field of low-complexity adaptive filtering. The compressed data stream consists of prediction residuals encoded using a method similar to that of the JPEG-LS lossless image compression standard. Compression results are presented for several datasets including some raw Airborne Visible/ Infrared Imaging Spectrometer (AVIRIS) datasets and raw Atmospheric Infrared Sounder (AIRS) datasets. The compression effectiveness obtained with the technique is competitive with that of the best of previously described techniques with similar complexity.

  2. Evaluation of Algorithms for Compressing Hyperspectral Data

    NASA Technical Reports Server (NTRS)

    Cook, Sid; Harsanyi, Joseph; Faber, Vance

    2003-01-01

    With EO-1 Hyperion in orbit NASA is showing their continued commitment to hyperspectral imaging (HSI). As HSI sensor technology continues to mature, the ever-increasing amounts of sensor data generated will result in a need for more cost effective communication and data handling systems. Lockheed Martin, with considerable experience in spacecraft design and developing special purpose onboard processors, has teamed with Applied Signal & Image Technology (ASIT), who has an extensive heritage in HSI spectral compression and Mapping Science (MSI) for JPEG 2000 spatial compression expertise, to develop a real-time and intelligent onboard processing (OBP) system to reduce HSI sensor downlink requirements. Our goal is to reduce the downlink requirement by a factor > 100, while retaining the necessary spectral and spatial fidelity of the sensor data needed to satisfy the many science, military, and intelligence goals of these systems. Our compression algorithms leverage commercial-off-the-shelf (COTS) spectral and spatial exploitation algorithms. We are currently in the process of evaluating these compression algorithms using statistical analysis and NASA scientists. We are also developing special purpose processors for executing these algorithms onboard a spacecraft.

  3. Progressive band processing for hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Schultz, Robert C.

    Hyperspectral imaging has emerged as an image processing technique in many applications. The reason that hyperspectral data is called hyperspectral is mainly because the massive amount of information provided by the hundreds of spectral bands that can be used for data analysis. However, due to very high band-to-band correlation much information may be also redundant. Consequently, how to effectively and best utilize such rich spectral information becomes very challenging. One general approach is data dimensionality reduction which can be performed by data compression techniques, such as data transforms, and data reduction techniques, such as band selection. This dissertation presents a new area in hyperspectral imaging, to be called progressive hyperspectral imaging, which has not been explored in the past. Specifically, it derives a new theory, called Progressive Band Processing (PBP) of hyperspectral data that can significantly reduce computing time and can also be realized in real-time. It is particularly suited for application areas such as hyperspectral data communications and transmission where data can be communicated and transmitted progressively through spectral or satellite channels with limited data storage. Most importantly, PBP allows users to screen preliminary results before deciding to continue with processing the complete data set. These advantages benefit users of hyperspectral data by reducing processing time and increasing the timeliness of crucial decisions made based on the data such as identifying key intelligence information when a required response time is short.

  4. Compact and robust hyperspectral camera based on compressed sensing

    NASA Astrophysics Data System (ADS)

    Žídek, K.; Denk, O.; Hlubuček, J.; Václavík, J.

    2016-11-01

    Spectrum of light which is emitted or reflected by an object carries immense amount of information about the object. A simple piece of evidence is the importance of color sensing for human vision. Combining an image acquisition with efficient measurement of light spectra for each detected pixel is therefore one of the important issues in imaging, referred as hyperspectral imaging. We demonstrate a construction of a compact and robust hyperspectral camera for the visible and near-IR spectral region. The camera was designed vastly based on off-shelf optics, yet an extensive optimization and addition of three customized parts enabled construction of the camera featuring a low f-number (F/3.9) and fully concentric optics. We employ a novel approach of compressed sensing (namely coded aperture snapshot spectral imaging, abbrev. CASSI). The compressed sensing enables to computationally extract an encoded hyperspectral information from a single camera exposition. Owing to the technique the camera lacks any moving or scanning part, while it can record the full image and spectral information in a single snapshot. Moreover, unlike the commonly used compressed sensing table-top apparatuses, the camera represents a portable device able to work outside a lab. We demonstrate the spectro-temporal reconstruction of recorded scenes based on 90×90 random matrix encoding. Finally, we discuss potential of the compressed sensing in hyperspectral camera.

  5. Hyperspectral fundus imager

    NASA Astrophysics Data System (ADS)

    Truitt, Paul W.; Soliz, Peter; Meigs, Andrew D.; Otten, Leonard John, III

    2000-11-01

    A Fourier Transform hyperspectral imager was integrated onto a standard clinical fundus camera, a Zeiss FF3, for the purposes of spectrally characterizing normal anatomical and pathological features in the human ocular fundus. To develop this instrument an existing FDA approved retinal camera was selected to avoid the difficulties of obtaining new FDA approval. Because of this, several unusual design constraints were imposed on the optical configuration. Techniques to calibrate the sensor and to define where the hyperspectral pushbroom stripe was located on the retina were developed, including the manufacturing of an artificial eye with calibration features suitable for a spectral imager. In this implementation the Fourier transform hyperspectral imager can collect over a hundred 86 cm-1 spectrally resolved bands with 12 micro meter/pixel spatial resolution within the 1050 nm to 450 nm band. This equates to 2 nm to 8 nm spectral resolution depending on the wavelength. For retinal observations the band of interest tends to lie between 475 nm and 790 nm. The instrument has been in use over the last year successfully collecting hyperspectral images of the optic disc, retinal vessels, choroidal vessels, retinal backgrounds, and macula diabetic macular edema, and lesions of age-related macular degeneration.

  6. Compressive Imaging via Approximate Message Passing

    DTIC Science & Technology

    2015-09-04

    We propose novel compressive imaging algorithms that employ approximate message passing (AMP), which is an iterative signal estimation algorithm that...Approved for Public Release; Distribution Unlimited Final Report: Compressive Imaging via Approximate Message Passing The views, opinions and/or findings...Research Triangle Park, NC 27709-2211 approximate message passing , compressive imaging, compressive sensing, hyperspectral imaging, signal reconstruction

  7. Quantitative Hyperspectral Reflectance Imaging.

    PubMed

    Klein, Marvin E; Aalderink, Bernard J; Padoan, Roberto; De Bruin, Gerrit; Steemers, Ted A G

    2008-09-11

    Hyperspectral imaging is a non-destructive optical analysis technique that can for instance be used to obtain information from cultural heritage objects unavailable with conventional colour or multi-spectral photography. This technique can be used to distinguish and recognize materials, to enhance the visibility of faint or obscured features, to detect signs of degradation and study the effect of environmental conditions on the object. We describe the basic concept, working principles, construction and performance of a laboratory instrument specifically developed for the analysis of historical documents. The instrument measures calibrated spectral reflectance images at 70 wavelengths ranging from 365 to 1100 nm (near-ultraviolet, visible and near-infrared). By using a wavelength tunable narrow-bandwidth light-source, the light energy used to illuminate the measured object is minimal, so that any light-induced degradation can be excluded. Basic analysis of the hyperspectral data includes a qualitative comparison of the spectral images and the extraction of quantitative data such as mean spectral reflectance curves and statistical information from user-defined regions-of-interest. More sophisticated mathematical feature extraction and classification techniques can be used to map areas on the document, where different types of ink had been applied or where one ink shows various degrees of degradation. The developed quantitative hyperspectral imager is currently in use by the Nationaal Archief (National Archives of The Netherlands) to study degradation effects of artificial samples and original documents, exposed in their permanent exhibition area or stored in their deposit rooms.

  8. Multipurpose Hyperspectral Imaging System

    NASA Technical Reports Server (NTRS)

    Mao, Chengye; Smith, David; Lanoue, Mark A.; Poole, Gavin H.; Heitschmidt, Jerry; Martinez, Luis; Windham, William A.; Lawrence, Kurt C.; Park, Bosoon

    2005-01-01

    A hyperspectral imaging system of high spectral and spatial resolution that incorporates several innovative features has been developed to incorporate a focal plane scanner (U.S. Patent 6,166,373). This feature enables the system to be used for both airborne/spaceborne and laboratory hyperspectral imaging with or without relative movement of the imaging system, and it can be used to scan a target of any size as long as the target can be imaged at the focal plane; for example, automated inspection of food items and identification of single-celled organisms. The spectral resolution of this system is greater than that of prior terrestrial multispectral imaging systems. Moreover, unlike prior high-spectral resolution airborne and spaceborne hyperspectral imaging systems, this system does not rely on relative movement of the target and the imaging system to sweep an imaging line across a scene. This compact system (see figure) consists of a front objective mounted at a translation stage with a motorized actuator, and a line-slit imaging spectrograph mounted within a rotary assembly with a rear adaptor to a charged-coupled-device (CCD) camera. Push-broom scanning is carried out by the motorized actuator which can be controlled either manually by an operator or automatically by a computer to drive the line-slit across an image at a focal plane of the front objective. To reduce the cost, the system has been designed to integrate as many as possible off-the-shelf components including the CCD camera and spectrograph. The system has achieved high spectral and spatial resolutions by using a high-quality CCD camera, spectrograph, and front objective lens. Fixtures for attachment of the system to a microscope (U.S. Patent 6,495,818 B1) make it possible to acquire multispectral images of single cells and other microscopic objects.

  9. Algorithm for Lossless Compression of Calibrated Hyperspectral Imagery

    NASA Technical Reports Server (NTRS)

    Kiely, Aaron B.; Klimesh, Matthew A.

    2010-01-01

    A two-stage predictive method was developed for lossless compression of calibrated hyperspectral imagery. The first prediction stage uses a conventional linear predictor intended to exploit spatial and/or spectral dependencies in the data. The compressor tabulates counts of the past values of the difference between this initial prediction and the actual sample value. To form the ultimate predicted value, in the second stage, these counts are combined with an adaptively updated weight function intended to capture information about data regularities introduced by the calibration process. Finally, prediction residuals are losslessly encoded using adaptive arithmetic coding. Algorithms of this type are commonly tested on a readily available collection of images from the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) hyperspectral imager. On the standard calibrated AVIRIS hyperspectral images that are most widely used for compression benchmarking, the new compressor provides more than 0.5 bits/sample improvement over the previous best compression results. The algorithm has been implemented in Mathematica. The compression algorithm was demonstrated as beneficial on 12-bit calibrated AVIRIS images.

  10. Planetary Hyperspectral Imager (PHI)

    NASA Technical Reports Server (NTRS)

    Silvergate, Peter

    1996-01-01

    A hyperspectral imaging spectrometer was breadboarded. Key innovations were use of a sapphire prism and single InSb focal plane to cover the entire spectral range, and a novel slit optic and relay optics to reduce thermal background. Operation over a spectral range of 450 - 4950 nm (approximately 3.5 spectral octaves) was demonstrated. Thermal background reduction by a factor of 8 - 10 was also demonstrated.

  11. Adaptive Grouping Distributed Compressive Sensing Reconstruction of Plant Hyperspectral Data.

    PubMed

    Xu, Ping; Liu, Junfeng; Xue, Lingyun; Zhang, Jingcheng; Qiu, Bo

    2017-06-07

    With the development of hyperspectral technology, to establish an effective spectral data compressive reconstruction method that can improve data storage, transmission, and maintaining spectral information is critical for quantitative remote sensing research and application in vegetation. The spectral adaptive grouping distributed compressive sensing (AGDCS) algorithm is proposed, which enables a distributed compressed sensing reconstruction of plant hyperspectral data. The spectral characteristics of hyperspectral data are analyzed and the joint sparse model is constructed. The spectral bands are adaptively grouped and the hyperspectral data are compressed and reconstructed on the basis of grouping. The experimental results showed that, compared with orthogonal matching pursuit (OMP) and gradient projection for sparse reconstruction (GPSR), AGDCS can significantly improve the visual effect of image reconstruction in the spatial domain. The peak signal-to-noise ratio (PSNR) at a low sampling rate (the sampling rate is lower than 0.2) increases by 13.72 dB than OMP and 1.66 dB than GPSR. In the spectral domain, the average normalized root mean square error, the mean absolute percentage error, and the mean absolute error of AGDCS is 35.38%, 31.83%, and 33.33% lower than GPSR, respectively. Additionally, AGDCS can achieve relatively high reconstructed efficiency.

  12. Adaptive Grouping Distributed Compressive Sensing Reconstruction of Plant Hyperspectral Data

    PubMed Central

    Xu, Ping; Liu, Junfeng; Xue, Lingyun; Zhang, Jingcheng; Qiu, Bo

    2017-01-01

    With the development of hyperspectral technology, to establish an effective spectral data compressive reconstruction method that can improve data storage, transmission, and maintaining spectral information is critical for quantitative remote sensing research and application in vegetation. The spectral adaptive grouping distributed compressive sensing (AGDCS) algorithm is proposed, which enables a distributed compressed sensing reconstruction of plant hyperspectral data. The spectral characteristics of hyperspectral data are analyzed and the joint sparse model is constructed. The spectral bands are adaptively grouped and the hyperspectral data are compressed and reconstructed on the basis of grouping. The experimental results showed that, compared with orthogonal matching pursuit (OMP) and gradient projection for sparse reconstruction (GPSR), AGDCS can significantly improve the visual effect of image reconstruction in the spatial domain. The peak signal-to-noise ratio (PSNR) at a low sampling rate (the sampling rate is lower than 0.2) increases by 13.72 dB than OMP and 1.66 dB than GPSR. In the spectral domain, the average normalized root mean square error, the mean absolute percentage error, and the mean absolute error of AGDCS is 35.38%, 31.83%, and 33.33% lower than GPSR, respectively. Additionally, AGDCS can achieve relatively high reconstructed efficiency. PMID:28590433

  13. Parallel hyperspectral compressive sensing method on GPU

    NASA Astrophysics Data System (ADS)

    Bernabé, Sergio; Martín, Gabriel; Nascimento, José M. P.

    2015-10-01

    Remote hyperspectral sensors collect large amounts of data per flight usually with low spatial resolution. It is known that the bandwidth connection between the satellite/airborne platform and the ground station is reduced, thus a compression onboard method is desirable to reduce the amount of data to be transmitted. This paper presents a parallel implementation of an compressive sensing method, called parallel hyperspectral coded aperture (P-HYCA), for graphics processing units (GPU) using the compute unified device architecture (CUDA). This method takes into account two main properties of hyperspectral dataset, namely the high correlation existing among the spectral bands and the generally low number of endmembers needed to explain the data, which largely reduces the number of measurements necessary to correctly reconstruct the original data. Experimental results conducted using synthetic and real hyperspectral datasets on two different GPU architectures by NVIDIA: GeForce GTX 590 and GeForce GTX TITAN, reveal that the use of GPUs can provide real-time compressive sensing performance. The achieved speedup is up to 20 times when compared with the processing time of HYCA running on one core of the Intel i7-2600 CPU (3.4GHz), with 16 Gbyte memory.

  14. Simulation of Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Richsmeier, Steven C.; Singer-Berk, Alexander; Bernstein, Lawrence S.

    2004-01-01

    A software package generates simulated hyperspectral imagery for use in validating algorithms that generate estimates of Earth-surface spectral reflectance from hyperspectral images acquired by airborne and spaceborne instruments. This software is based on a direct simulation Monte Carlo approach for modeling three-dimensional atmospheric radiative transport, as well as reflections from surfaces characterized by spatially inhomogeneous bidirectional reflectance distribution functions. In this approach, "ground truth" is accurately known through input specification of surface and atmospheric properties, and it is practical to consider wide variations of these properties. The software can treat both land and ocean surfaces, as well as the effects of finite clouds with surface shadowing. The spectral/spatial data cubes computed by use of this software can serve both as a substitute for, and a supplement to, field validation data.

  15. Airborne Hyperspectral Imaging System

    NASA Technical Reports Server (NTRS)

    Behar, Alberto E.; Cooper, Moogega; Adler, John; Jacobson, Tobias

    2012-01-01

    A document discusses a hyperspectral imaging instrument package designed to be carried aboard a helicopter. It was developed to map the depths of Greenland's supraglacial lakes. The instrument is capable of telescoping to twice its original length, allowing it to be retracted with the door closed during takeoff and landing, and manually extended in mid-flight. While extended, the instrument platform provides the attached hyperspectral imager a nadir-centered and unobstructed view of the ground. Before flight, the instrument mount is retracted and securely strapped down to existing anchor points on the floor of the helicopter. When the helicopter reaches the destination lake, the door is opened and the instrument mount is manually extended. Power to the instrument package is turned on, and the data acquisition computer is commanded via a serial cable from an onboard user-operated laptop to begin data collection. After data collection is complete, the instrument package is powered down and the mount retracted, allowing the door to be closed in preparation for landing. The present design for the instrument mount consists of a three-segment telescoping cantilever to allow for a sufficient extended length to see around the landing struts and provide a nadir-centered and unobstructed field of view for the hyperspectral imager. This instrument works on the premise that water preferentially absorbs light with longer wavelengths on the red side of the visible spectrum. This property can be exploited in order to remotely determine the depths of bodies of pure freshwater. An imager flying over such a lake receives light scattered from the surface, the bulk of the water column, and from the lake bottom. The strength of absorption of longer-wavelength light depends on the depth of the water column. Through calibration with in situ measurements of the water depths, a depth-determining algorithm may be developed to determine lake depth from these spectral properties of the

  16. Quantitative Hyperspectral Reflectance Imaging

    PubMed Central

    Klein, Marvin E.; Aalderink, Bernard J.; Padoan, Roberto; de Bruin, Gerrit; Steemers, Ted A.G.

    2008-01-01

    Hyperspectral imaging is a non-destructive optical analysis technique that can for instance be used to obtain information from cultural heritage objects unavailable with conventional colour or multi-spectral photography. This technique can be used to distinguish and recognize materials, to enhance the visibility of faint or obscured features, to detect signs of degradation and study the effect of environmental conditions on the object. We describe the basic concept, working principles, construction and performance of a laboratory instrument specifically developed for the analysis of historical documents. The instrument measures calibrated spectral reflectance images at 70 wavelengths ranging from 365 to 1100 nm (near-ultraviolet, visible and near-infrared). By using a wavelength tunable narrow-bandwidth light-source, the light energy used to illuminate the measured object is minimal, so that any light-induced degradation can be excluded. Basic analysis of the hyperspectral data includes a qualitative comparison of the spectral images and the extraction of quantitative data such as mean spectral reflectance curves and statistical information from user-defined regions-of-interest. More sophisticated mathematical feature extraction and classification techniques can be used to map areas on the document, where different types of ink had been applied or where one ink shows various degrees of degradation. The developed quantitative hyperspectral imager is currently in use by the Nationaal Archief (National Archives of The Netherlands) to study degradation effects of artificial samples and original documents, exposed in their permanent exhibition area or stored in their deposit rooms. PMID:27873831

  17. Onboard Image Processing System for Hyperspectral Sensor.

    PubMed

    Hihara, Hiroki; Moritani, Kotaro; Inoue, Masao; Hoshi, Yoshihiro; Iwasaki, Akira; Takada, Jun; Inada, Hitomi; Suzuki, Makoto; Seki, Taeko; Ichikawa, Satoshi; Tanii, Jun

    2015-09-25

    Onboard image processing systems for a hyperspectral sensor have been developed in order to maximize image data transmission efficiency for large volume and high speed data downlink capacity. Since more than 100 channels are required for hyperspectral sensors on Earth observation satellites, fast and small-footprint lossless image compression capability is essential for reducing the size and weight of a sensor system. A fast lossless image compression algorithm has been developed, and is implemented in the onboard correction circuitry of sensitivity and linearity of Complementary Metal Oxide Semiconductor (CMOS) sensors in order to maximize the compression ratio. The employed image compression method is based on Fast, Efficient, Lossless Image compression System (FELICS), which is a hierarchical predictive coding method with resolution scaling. To improve FELICS's performance of image decorrelation and entropy coding, we apply a two-dimensional interpolation prediction and adaptive Golomb-Rice coding. It supports progressive decompression using resolution scaling while still maintaining superior performance measured as speed and complexity. Coding efficiency and compression speed enlarge the effective capacity of signal transmission channels, which lead to reducing onboard hardware by multiplexing sensor signals into a reduced number of compression circuits. The circuitry is embedded into the data formatter of the sensor system without adding size, weight, power consumption, and fabrication cost.

  18. Onboard Image Processing System for Hyperspectral Sensor

    PubMed Central

    Hihara, Hiroki; Moritani, Kotaro; Inoue, Masao; Hoshi, Yoshihiro; Iwasaki, Akira; Takada, Jun; Inada, Hitomi; Suzuki, Makoto; Seki, Taeko; Ichikawa, Satoshi; Tanii, Jun

    2015-01-01

    Onboard image processing systems for a hyperspectral sensor have been developed in order to maximize image data transmission efficiency for large volume and high speed data downlink capacity. Since more than 100 channels are required for hyperspectral sensors on Earth observation satellites, fast and small-footprint lossless image compression capability is essential for reducing the size and weight of a sensor system. A fast lossless image compression algorithm has been developed, and is implemented in the onboard correction circuitry of sensitivity and linearity of Complementary Metal Oxide Semiconductor (CMOS) sensors in order to maximize the compression ratio. The employed image compression method is based on Fast, Efficient, Lossless Image compression System (FELICS), which is a hierarchical predictive coding method with resolution scaling. To improve FELICS’s performance of image decorrelation and entropy coding, we apply a two-dimensional interpolation prediction and adaptive Golomb-Rice coding. It supports progressive decompression using resolution scaling while still maintaining superior performance measured as speed and complexity. Coding efficiency and compression speed enlarge the effective capacity of signal transmission channels, which lead to reducing onboard hardware by multiplexing sensor signals into a reduced number of compression circuits. The circuitry is embedded into the data formatter of the sensor system without adding size, weight, power consumption, and fabrication cost. PMID:26404281

  19. Hyperspectral Imager-Tracker

    NASA Technical Reports Server (NTRS)

    Agurok, Llya

    2013-01-01

    The Hyperspectral Imager-Tracker (HIT) is a technique for visualization and tracking of low-contrast, fast-moving objects. The HIT architecture is based on an innovative and only recently developed concept in imaging optics. This innovative architecture will give the Light Prescriptions Innovators (LPI) HIT the possibility of simultaneously collecting the spectral band images (hyperspectral cube), IR images, and to operate with high-light-gathering power and high magnification for multiple fast- moving objects. Adaptive Spectral Filtering algorithms will efficiently increase the contrast of low-contrast scenes. The most hazardous parts of a space mission are the first stage of a launch and the last 10 kilometers of the landing trajectory. In general, a close watch on spacecraft operation is required at distances up to 70 km. Tracking at such distances is usually associated with the use of radar, but its milliradian angular resolution translates to 100- m spatial resolution at 70-km distance. With sufficient power, radar can track a spacecraft as a whole object, but will not provide detail in the case of an accident, particularly for small debris in the onemeter range, which can only be achieved optically. It will be important to track the debris, which could disintegrate further into more debris, all the way to the ground. Such fragmentation could cause ballistic predictions, based on observations using high-resolution but narrow-field optics for only the first few seconds of the event, to be inaccurate. No optical imager architecture exists to satisfy NASA requirements. The HIT was developed for space vehicle tracking, in-flight inspection, and in the case of an accident, a detailed recording of the event. The system is a combination of five subsystems: (1) a roving fovea telescope with a wide 30 field of regard; (2) narrow, high-resolution fovea field optics; (3) a Coude optics system for telescope output beam stabilization; (4) a hyperspectral

  20. GPU Lossless Hyperspectral Data Compression System for Space Applications

    NASA Technical Reports Server (NTRS)

    Keymeulen, Didier; Aranki, Nazeeh; Hopson, Ben; Kiely, Aaron; Klimesh, Matthew; Benkrid, Khaled

    2012-01-01

    On-board lossless hyperspectral data compression reduces data volume in order to meet NASA and DoD limited downlink capabilities. At JPL, a novel, adaptive and predictive technique for lossless compression of hyperspectral data, named the Fast Lossless (FL) algorithm, was recently developed. This technique uses an adaptive filtering method and achieves state-of-the-art performance in both compression effectiveness and low complexity. Because of its outstanding performance and suitability for real-time onboard hardware implementation, the FL compressor is being formalized as the emerging CCSDS Standard for Lossless Multispectral & Hyperspectral image compression. The FL compressor is well-suited for parallel hardware implementation. A GPU hardware implementation was developed for FL targeting the current state-of-the-art GPUs from NVIDIA(Trademark). The GPU implementation on a NVIDIA(Trademark) GeForce(Trademark) GTX 580 achieves a throughput performance of 583.08 Mbits/sec (44.85 MSamples/sec) and an acceleration of at least 6 times a software implementation running on a 3.47 GHz single core Intel(Trademark) Xeon(Trademark) processor. This paper describes the design and implementation of the FL algorithm on the GPU. The massively parallel implementation will provide in the future a fast and practical real-time solution for airborne and space applications.

  1. GPU Lossless Hyperspectral Data Compression System for Space Applications

    NASA Technical Reports Server (NTRS)

    Keymeulen, Didier; Aranki, Nazeeh; Hopson, Ben; Kiely, Aaron; Klimesh, Matthew; Benkrid, Khaled

    2012-01-01

    On-board lossless hyperspectral data compression reduces data volume in order to meet NASA and DoD limited downlink capabilities. At JPL, a novel, adaptive and predictive technique for lossless compression of hyperspectral data, named the Fast Lossless (FL) algorithm, was recently developed. This technique uses an adaptive filtering method and achieves state-of-the-art performance in both compression effectiveness and low complexity. Because of its outstanding performance and suitability for real-time onboard hardware implementation, the FL compressor is being formalized as the emerging CCSDS Standard for Lossless Multispectral & Hyperspectral image compression. The FL compressor is well-suited for parallel hardware implementation. A GPU hardware implementation was developed for FL targeting the current state-of-the-art GPUs from NVIDIA(Trademark). The GPU implementation on a NVIDIA(Trademark) GeForce(Trademark) GTX 580 achieves a throughput performance of 583.08 Mbits/sec (44.85 MSamples/sec) and an acceleration of at least 6 times a software implementation running on a 3.47 GHz single core Intel(Trademark) Xeon(Trademark) processor. This paper describes the design and implementation of the FL algorithm on the GPU. The massively parallel implementation will provide in the future a fast and practical real-time solution for airborne and space applications.

  2. Hyperspectral Systems Increase Imaging Capabilities

    NASA Technical Reports Server (NTRS)

    2010-01-01

    In 1983, NASA started developing hyperspectral systems to image in the ultraviolet and infrared wavelengths. In 2001, the first on-orbit hyperspectral imager, Hyperion, was launched aboard the Earth Observing-1 spacecraft. Based on the hyperspectral imaging sensors used in Earth observation satellites, Stennis Space Center engineers and Institute for Technology Development researchers collaborated on a new design that was smaller and used an improved scanner. Featured in Spinoff 2007, the technology is now exclusively licensed by Themis Vision Systems LLC, of Richmond, Virginia, and is widely used in medical and life sciences, defense and security, forensics, and microscopy.

  3. New Thermal Infrared Hyperspectral Imagers

    DTIC Science & Technology

    2009-10-01

    ANSI Std Z39-18 New Thermal Infrared Hyperspectral Imagers 4 - 2 RTO-MP-SET-151 UNCLASSIFIED/UNLIMITED uncooled microbolometer detector , has...temperature does not affect on the temperature of the focal plane array, which is in constant New Thermal Infrared Hyperspectral Imagers RTO-MP-SET...Boreman, G.D., Infrared Detectors and Systems, John Wiley & Sons, (1996). [5] Kruse, P.W., Uncooled Thermal Imaging, SPIE Tutorial Texts in Optical

  4. Evaluation of copyright protection schemes for hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Minguillon, Julia; Herrera-Joancomarti, Jordi; Megias, David; Serra-Sagrista, Joan

    2004-02-01

    In this paper we evaluate the performance of several image watermarking schemes applied to hyperspectral imaging. An image watermarking scheme based on JPEG2000 which can be also used to store and manipulate hyperspectral images is also described. Different watermarking schemes are tested in order to determine the suitability of each one for a specific hyperspectral image environment. The impact of classical GIS operations (namely zooming, cropping and compression) on the performance of each watermarking scheme is measured in terms of capacity and robustness. In order to do so, we study several possibilities for watermarking hyperspectral images, as all hyperspectral image bands should be taken into account. We also study the impact of watermarking in image quality, measured as usual by PSNR, but also by the degradation of classification performance. Compression, classification and watermarking are closely related to each other as decisions taken in one subject have a large impact on the others. Our results show that the newcomer JPEG2000 standard is a useful tool for both hyperspectral imaging and copyright protection purposes. The proposed watermarking scheme, which takes advantage of JPEG2000 standard capabilities, can be considered to be robust under the constraints defined by the integration of hyperspectral imaging with geographical information systems. JPEG2000 extensions defined by the standard related to this work are also considered.

  5. Fast and Adaptive Lossless Onboard Hyperspectral Data Compression System

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh I.; Keymeulen, Didier; Kimesh, Matthew A.

    2012-01-01

    Modern hyperspectral imaging systems are able to acquire far more data than can be downlinked from a spacecraft. Onboard data compression helps to alleviate this problem, but requires a system capable of power efficiency and high throughput. Software solutions have limited throughput performance and are power-hungry. Dedicated hardware solutions can provide both high throughput and power efficiency, while taking the load off of the main processor. Thus a hardware compression system was developed. The implementation uses a field-programmable gate array (FPGA). The implementation is based on the fast lossless (FL) compression algorithm reported in Fast Lossless Compression of Multispectral-Image Data (NPO-42517), NASA Tech Briefs, Vol. 30, No. 8 (August 2006), page 26, which achieves excellent compression performance and has low complexity. This algorithm performs predictive compression using an adaptive filtering method, and uses adaptive Golomb coding. The implementation also packetizes the coded data. The FL algorithm is well suited for implementation in hardware. In the FPGA implementation, one sample is compressed every clock cycle, which makes for a fast and practical realtime solution for space applications. Benefits of this implementation are: 1) The underlying algorithm achieves a combination of low complexity and compression effectiveness that exceeds that of techniques currently in use. 2) The algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. 3) Hardware acceleration provides a throughput improvement of 10 to 100 times vs. the software implementation. A prototype of the compressor is available in software, but it runs at a speed that does not meet spacecraft requirements. The hardware implementation targets the Xilinx Virtex IV FPGAs, and makes the use of this compressor practical for Earth satellites as well as beyond-Earth missions with hyperspectral instruments.

  6. Medical hyperspectral imaging: a review.

    PubMed

    Lu, Guolan; Fei, Baowei

    2014-01-01

    Hyperspectral imaging (HSI) is an emerging imaging modality for medical applications, especially in disease diagnosis and image-guided surgery. HSI acquires a three-dimensional dataset called hypercube, with two spatial dimensions and one spectral dimension. Spatially resolved spectral imaging obtained by HSI provides diagnostic information about the tissue physiology, morphology, and composition. This review paper presents an overview of the literature on medical hyperspectral imaging technology and its applications. The aim of the survey is threefold: an introduction for those new to the field, an overview for those working in the field, and a reference for those searching for literature on a specific application.

  7. Medical hyperspectral imaging: a review

    PubMed Central

    Lu, Guolan; Fei, Baowei

    2014-01-01

    Abstract. Hyperspectral imaging (HSI) is an emerging imaging modality for medical applications, especially in disease diagnosis and image-guided surgery. HSI acquires a three-dimensional dataset called hypercube, with two spatial dimensions and one spectral dimension. Spatially resolved spectral imaging obtained by HSI provides diagnostic information about the tissue physiology, morphology, and composition. This review paper presents an overview of the literature on medical hyperspectral imaging technology and its applications. The aim of the survey is threefold: an introduction for those new to the field, an overview for those working in the field, and a reference for those searching for literature on a specific application. PMID:24441941

  8. FAPEC-based lossless and lossy hyperspectral data compression

    NASA Astrophysics Data System (ADS)

    Portell, Jordi; Artigues, Gabriel; Iudica, Riccardo; García-Berro, Enrique

    2015-10-01

    Data compression is essential for remote sensing based on hyperspectral sensors owing to the increasing amount of data generated by modern instrumentation. CCSDS issued the 123.0 standard for lossless hyperspectral compression, and a new lossy hyperspectral compression recommendation is being prepared. We have developed multispectral and hyperspectral pre-processing stages for FAPEC, a data compression algorithm based on an entropy coder. We can select a prediction-based lossless stage that offers excellent results and speed. Alternatively, a DWT-based lossless and lossy stage can be selected, which offers excellent results yet obviously requiring more compression time. Finally, a lossless stage based on our HPA algorithm can also be selected, only lossless for now but with the lossy option in preparation. Here we present the overall design of these data compression systems and the results obtained on a variety of real data, including ratios, speed and quality.

  9. New generation handheld hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Wu, Huawen (Owen); Li, Hui; Tang, Shengjun

    2016-10-01

    A miniaturized hyper-spectral imager is enabled with image sensor integrated with dispersing elements in a very compact form factor, removing the need for expensive, moving, bulky and complex optics that have been used in conventional hyper-spectral imagers for decades. The result is a handheld spectral imager that can be installed on miniature UAV drones or conveyor belts in production lines. Eventually, small handhelds can be adapted for use in outpatient medical clinics for point-of-care diagnostics and other in-field applications.

  10. Clusters versus FPGAs for spectral mixture analysis-based lossy hyperspectral data compression

    NASA Astrophysics Data System (ADS)

    Plaza, Antonio J.

    2008-08-01

    The increasing number of airborne and satellite platforms that incorporate hyperspectral imaging spectrometers has soon created the need for efficient storage, transmission and data compression methodologies. In particular, hyperspectral data compression is expected to play a crucial role in many remote sensing applications. Many efforts have been devoted to designing and developing lossless and lossy algorithms for hyperspectral imagery. However, most available lossy compression approaches have largely overlooked the impact of mixed pixels and subpixel targets, which can be accurately modeled and uncovered by resorting to the wealth of spectral information provided by hyperspectral image data. In this paper, we develop a simple lossy compression technique which relies on the concept of spectral unmixing, one of the most popular approaches to deal with mixed pixels and subpixel targets in hyperspectral analysis. The proposed method uses a two-stage approach in which the purest spectral signatures (also called endmembers) are first extracted from the input data, and then used to express mixed pixels as linear combinations of endmembers. Analytical and experimental results are presented in the context of a real application, using hyperspectral data collected by NASA's Jet Propulsion Laboratory over the World Trade Center area in New York City, right after the terrorist attacks of September 11th. These data are used in this work to evaluate the impact of compression using different methods on spectral signature quality for accurate detection of hot spot fires. Two parallel implementations are developed for the proposed lossy compression algorithm: a multiprocessor implementation tested on Thunderhead, a massively parallel Beowulf cluster at NASA's Goddard Space Flight Center, and a hardware implementation developed on a Xilinx Virtex-II FPGA device. Combined, these parts offer a thoughtful perspective on the potential and emerging challenges of incorporating parallel

  11. Hyperspectral imaging polarimeter design and calibration

    NASA Astrophysics Data System (ADS)

    Loe, Richard S.; Duggin, Michael J.

    2002-01-01

    The integration and calibration of a hyperspectral imaging polarimeter is described. The system was designed to exploit subtle spectral details in visible and near-IR hyperspectral polarimetric images. All of the system components were commercial-off-the-shelf. This device uses a tunable liquid crystal filter and 16-bit cooled CCD camera. The challenges of calibrating a hyperspectral polarimeter are discussed.

  12. Contextual Detection of Anomalies within Hyperspectral Images

    DTIC Science & Technology

    2011-03-01

    Hyperspectral Imagery (HSI), Unsupervised Target Detection, Target Identification, Contextual Anomaly Detection 16. SECURITY CLASSIFICATION OF: 17. LIMITATION...processing. Hyperspectral imaging has a wide range of applications within remote sensing, not limited to terrain classification , environmental monitoring...Johnson, R. J. (2008). Improved feature extraction, feature selection, and identification techniques that create a fast unsupervised hyperspectral

  13. Single-pixel hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Suo, Jinli; Wang, Yuwang; Bian, Liheng; Dai, Qionghai

    2016-10-01

    Conventional multispectral imaging methods detect photons of a 3D hyperspectral data cube separately either in the spatial or spectral dimension using array detectors, and are thus photon inefficient and spectrum range limited. Besides, they are usually bulky and highly expensive. To address these issues, this paper presents single-pixel multispectral imaging techniques, which are of high sensitivity, wide spectrum range, low cost and light weight. Two mechanisms are proposed, and experimental validation are also reported.

  14. Hyperspectral Imaging of River Systems

    DTIC Science & Technology

    2010-09-30

    plume. The 300 m MERIS pixels do a much better job of imaging the river mouth. 3 The Hyperspectral Imager for the Coastal Ocean (HICO; Corson et...radiances, L1B data is supplied by NRL’s HICOTM team [ Corson 2010]. (b) At-sensor radiance for black pixel in Fig. 1 (a). The raw data is indicated...that goal. RELATED PROJECTS I continue to collaborate regularly with colleagues at the NRL Remote Sensing Division (Code 7200; Mike Corson and

  15. Hyperspectral imaging of ischemic wounds

    NASA Astrophysics Data System (ADS)

    Gnyawali, Surya C.; Elgharably, Haytham; Melvin, James; Huang, Kun; Bergdall, Valerie; Allen, David W.; Hwang, Jeeseong; Litorja, Maritoni; Shirley, Eric; Sen, Chandan K.; Xu, Ronald

    2012-03-01

    Optical imaging has the potential to achieve high spatial resolution and high functional sensitivity in wound assessment. However, clinical acceptance of many optical imaging devices is hampered by poor reproducibility, low accuracy, and lack of biological interpretation. We developed an in vivo model of ischemic flap for non-contact assessment of wound tissue functional parameters and spectral characteristics. The model was created by elevating the bipedicle skin flaps of a domestic pig from the underlying vascular bed and inhibiting graft bed reperfusion by a silastic sheet. Hyperspectral imaging was carried out on the ischemic flap model and compared with transcutaneous oxygen tension and perfusion measurements at different positions of the wound. Hyperspectral images have also been captured continuously during a post-occlusive reactive hyperemia (PORH) procedure. Tissue spectral characteristics obtained by hyperspectral imaging correlated well with cutaneous tissue oxygen tension, blood perfusion, and microscopic changes of tissue morphology. Our experiments not only demonstrated the technical feasibility for quantitative assessment of chronic wound but also provided a potential digital phantom platform for quantitative characterization and calibration of medical optical devices.

  16. Hyperspectral imaging of bruised skin

    NASA Astrophysics Data System (ADS)

    Randeberg, Lise L.; Baarstad, Ivar; Løke, Trond; Kaspersen, Peter; Svaasand, Lars O.

    2006-02-01

    Bruises can be important evidence in legal medicine, for example in cases of child abuse. Optical techniques can be used to discriminate and quantify the chromophores present in bruised skin, and thereby aid dating of an injury. However, spectroscopic techniques provide only average chromophore concentrations for the sampled volume, and contain little information about the spatial chromophore distribution in the bruise. Hyperspectral imaging combines the power of imaging and spectroscopy, and can provide both spectroscopic and spatial information. In this study a hyperspectral imaging system developed by Norsk Elektro Optikk AS was used to measure the temporal development of bruised skin in a human volunteer. The bruises were inflicted by paintball bullets. The wavelength ranges used were 400 - 1000 nm (VNIR) and 900 - 1700 nm (SWIR), and the spectral sampling intervals were 3.7 and 5 nm, respectively. Preliminary results show good spatial discrimination of the bruised areas compared to normal skin. Development of a white spot can be seen in the central zone of the bruises. This central white zone was found to resemble the shape of the object hitting the skin, and is believed to develop in areas where the impact caused vessel damage. These results show that hyperspectral imaging is a promising technique to evaluate the temporal and spatial development of bruises on human skin.

  17. Hyperspectral Imaging of River Systems

    DTIC Science & Technology

    2012-09-30

    derivatives, to target products --- sediment, chlorophyll, or sampled pixels know to contain pigments of interest, such as phycocyanin commonly found in...from 400 at 450 nm to 200 at 850 nm. The Hyperion SNR is approximately ¼ of the HICO SNR.] IMPACT/ APPLICATIONS The long term goal of this work...Tufillaro, M. Corson, B-C. Gao, and R. Lucke, 2012, “Hyperspectral Imager for the Coastal Ocean (HICO): overview and Coastal Ocean Applications

  18. Compact hyperspectral image sensor based on a novel hyperspectral encoder

    NASA Astrophysics Data System (ADS)

    Hegyi, Alex N.; Martini, Joerg

    2015-06-01

    A novel hyperspectral imaging sensor is demonstrated that can enable breakthrough applications of hyperspectral imaging in domains not previously accessible. Our technology consists of a planar hyperspectral encoder combined with a traditional monochrome image sensor. The encoder adds negligibly to the sensor's overall size, weight, power requirement, and cost (SWaP-C); therefore, the new imager can be incorporated wherever image sensors are currently used, such as in cell phones and other consumer electronics. In analogy to Fourier spectroscopy, the technique maintains a high optical throughput because narrow-band spectral filters are unnecessary. Unlike conventional Fourier techniques that rely on Michelson interferometry, our hyperspectral encoder is robust to vibration and amenable to planar integration. The device can be viewed within a computational optics paradigm: the hardware is uncomplicated and serves to increase the information content of the acquired data, and the complexity of the system, that is, the decoding of the spectral information, is shifted to computation. Consequently, system tradeoffs, for example, between spectral resolution and imaging speed or spatial resolution, are selectable in software. Our prototype demonstration of the hyperspectral imager is based on a commercially-available silicon CCD. The prototype encoder was inserted within the camera's ~1 cu. in. housing. The prototype can image about 49 independent spectral bands distributed from 350 nm to 1250 nm, but the technology may be extendable over a wavelength range from ~300 nm to ~10 microns, with suitable choice of detector.

  19. Inverse Problems in Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Berisha, Sebastian

    In hyperpsectral imaging, multiple images of the same scene are obtained over a contiguous range of wavelengths in the electromagnetic spectrum. Hyperspectral images represent observations of a scene at many different wavelengths and most importantly associate to each pixel in the imaged scene a full spectral vector or spectral signature. However, due to the presence of spectral mixtures (at different scales) in the scene and/or low spatial resolution of the hyperspectral sensor, the acquired spectral vectors of each pixel are actually a mixture of the spectra of the various materials present in the spatial coverage area of the corresponding pixel, and they also contain additional degradations caused by atmospheric blurring.We present a numerical approach for deblurring and sparse unmixing of space objects taken by ground based telescopes. A major challenge for deblurring hyperspectral images is that of estimating the overall blurring operator, taking into account the fact that the blurring operator point spread function (PSF) can be wavelength dependent and depend on the imaging system as well as the effects of atmospheric turbulence. We formulate the PSF estimation as a nonlinear least squares problem, which is solved using a variable projection Gauss-Newton method. Our analysis shows that the Jacobian can be potentially very ill-conditioned. To deal with this ill-conditioning, we use a combination of subset selection and regularization. We then incorporate the PSF estimation scheme with a preconditioned alternating direction method of multipliers to solve the deblurring and sparse unmixing problem. Experimental results illustrate the effectiveness of the resulting numerical schemes.

  20. Hyperspectral imaging for nondestructive evaluation of tomatoes

    USDA-ARS?s Scientific Manuscript database

    Machine vision methods for quality and defect evaluation of tomatoes have been studied for online sorting and robotic harvesting applications. We investigated the use of a hyperspectral imaging system for quality evaluation and defect detection for tomatoes. Hyperspectral reflectance images were a...

  1. Effects of Lossy Compression of Hyperspectral Imagery

    DTIC Science & Technology

    2007-11-02

    age /transmission requirements than the unprocessed data.) An example is target detection. One could apply the detection algorithm to generate a...Bside bits. To decompress, the bitstream is first decompressed to obtain approximations of the retained PC im- ages , and any discarded PC images are...Overall Compression Ratio 55 , , , , , , ,Nc = 20 50- 45 40 T 35 N= 10 2 30- - 25- 201 N=5 M o 15- SNo = 10 N =20 0 20 40 60 80 100 120 140 160 180 200

  2. Hyperspectral Imaging of human arm

    NASA Technical Reports Server (NTRS)

    2003-01-01

    ProVision Technologies, a NASA research partnership center at Sternis Space Center in Mississippi, has developed a new hyperspectral imaging (HSI) system that is much smaller than the original large units used aboard remote sensing aircraft and satellites. The new apparatus is about the size of a breadbox. Health-related applications of HSI include non-invasive analysis of human skin to characterize wounds and wound healing rates (especially important for space travelers who heal more slowly), determining if burns are first-, second-, or third degree (rather than painful punch biopsies). The work is sponsored under NASA's Space Product Development (SPD) program.

  3. Hyperspectral Imaging of human arm

    NASA Technical Reports Server (NTRS)

    2003-01-01

    ProVision Technologies, a NASA research partnership center at Sternis Space Center in Mississippi, has developed a new hyperspectral imaging (HSI) system that is much smaller than the original large units used aboard remote sensing aircraft and satellites. The new apparatus is about the size of a breadbox. Health-related applications of HSI include non-invasive analysis of human skin to characterize wounds and wound healing rates (especially important for space travelers who heal more slowly), determining if burns are first-, second-, or third degree (rather than painful punch biopsies). The work is sponsored under NASA's Space Product Development (SPD) program.

  4. Common hyperspectral image database design

    NASA Astrophysics Data System (ADS)

    Tian, Lixun; Liao, Ningfang; Chai, Ali

    2009-11-01

    This paper is to introduce Common hyperspectral image database with a demand-oriented Database design method (CHIDB), which comprehensively set ground-based spectra, standardized hyperspectral cube, spectral analysis together to meet some applications. The paper presents an integrated approach to retrieving spectral and spatial patterns from remotely sensed imagery using state-of-the-art data mining and advanced database technologies, some data mining ideas and functions were associated into CHIDB to make it more suitable to serve in agriculture, geological and environmental areas. A broad range of data from multiple regions of the electromagnetic spectrum is supported, including ultraviolet, visible, near-infrared, thermal infrared, and fluorescence. CHIDB is based on dotnet framework and designed by MVC architecture including five main functional modules: Data importer/exporter, Image/spectrum Viewer, Data Processor, Parameter Extractor, and On-line Analyzer. The original data were all stored in SQL server2008 for efficient search, query and update, and some advance Spectral image data Processing technology are used such as Parallel processing in C#; Finally an application case is presented in agricultural disease detecting area.

  5. Embedded Bone Fragment Detection in Chicken Fillets using Transmittance Image Enhancement and Hyperspectral Reflectance Imaging

    USDA-ARS?s Scientific Manuscript database

    This paper is concerned with the detection of bone fragments embedded in compressed de-boned skinless chicken breast fillets by enhancing single-band transmittance images generated by back-lighting and exploiting spectral information from hyperspectral reflectance images. Optical imaging of chicken ...

  6. Lossless data compression for infrared hyperspectral sounders: an update

    NASA Astrophysics Data System (ADS)

    Huang, Bormin; Huang, Hung-Lung A.; Ahuja, Alok; Schmit, Timothy J.; Heymann, Roger W.

    2004-10-01

    The compression of hyperspectral sounder data is beneficial for more efficient archive and transfer given its large 3-D volume. Moreover, since physical retrieval of geophysical parameters from hyperspectral sounder data is a mathematically ill-posed problem that is sensitive to the error of the data, lossless or near-lossless compression is desired. This paper provides an update into applications of state-of-the-art 2D and 3D lossless compression algorithms such as 3D EZW, 3D SPIHT, 2D JPEG2000, 2D JPEG-LS and 2D CALIC for hyperspectral sounder data. In addition, in order to better explore the correlations between the remote spectral regions affected by the same type of atmospheric absorbing constituents or clouds, the Bias-Adjusted Reordering (BAR) scheme is presented which reorders the data such that the bias-adjusted distance between any two neighboring vectors is minimized. This scheme coupled with any of the state-of-the-art compression algorithms produces significant compression gains.

  7. Reflectance and fluorescence hyperspectral elastic image registration

    NASA Astrophysics Data System (ADS)

    Lange, Holger; Baker, Ross; Hakansson, Johan; Gustafsson, Ulf P.

    2004-05-01

    Science and Technology International (STI) presents a novel multi-modal elastic image registration approach for a new hyperspectral medical imaging modality. STI's HyperSpectral Diagnostic Imaging (HSDI) cervical instrument is used for the early detection of uterine cervical cancer. A Computer-Aided-Diagnostic (CAD) system is being developed to aid the physician with the diagnosis of pre-cancerous and cancerous tissue regions. The CAD system uses the fusion of multiple data sources to optimize its performance. The key enabling technology for the data fusion is image registration. The difficulty lies in the image registration of fluorescence and reflectance hyperspectral data due to the occurrence of soft tissue movement and the limited resemblance of these types of imagery. The presented approach is based on embedding a reflectance image in the fluorescence hyperspectral imagery. Having a reflectance image in both data sets resolves the resemblance problem and thereby enables the use of elastic image registration algorithms required to compensate for soft tissue movements. Several methods of embedding the reflectance image in the fluorescence hyperspectral imagery are described. Initial experiments with human subject data are presented where a reflectance image is embedded in the fluorescence hyperspectral imagery.

  8. Detecting citrus canker by hyperspectral reflectance imaging and PCA-based image classification method

    NASA Astrophysics Data System (ADS)

    Qin, Jianwei; Burks, Thomas F.; Kim, Moon S.; Chao, Kuanglin; Ritenour, Mark A.

    2008-04-01

    Citrus canker is one of the most devastating diseases that threaten citrus crops. Technologies that can efficiently identify citrus canker would assure fruit quality and safety and enhance the competitiveness and profitability of the citrus industry. This research was aimed to investigate the potential of using hyperspectral imaging technique for detecting canker lesions on citrus fruit. A portable hyperspectral imaging system consisting of an automatic sample handling unit, a light source, and a hyperspectral imaging unit was developed for citrus canker detection. The imaging system was used to acquire reflectance images from citrus samples in the wavelength range between 400 nm and 900 nm. Ruby Red grapefruits with normal and various diseased skin conditions including canker, copper burn, greasy spot, wind scar, cake melanose, and specular melanose were tested. Hyperspectral reflectance images were analyzed using principal component analysis (PCA) to compress the 3-D hyperspectral image data and extract useful image features that could be used to discriminate cankerous samples from normal and other diseased samples. Image processing and classification algorithms were developed based upon the transformed images of PCA. The overall accuracy for canker detection was 92.7%. This research demonstrated that hyperspectral imaging technique could be used for discriminating citrus canker from other confounding diseases.

  9. Organizing Compression of Hyperspectral Imagery to Allow Efficient Parallel Decompression

    NASA Technical Reports Server (NTRS)

    Klimesh, Matthew A.; Kiely, Aaron B.

    2014-01-01

    family of schemes has been devised for organizing the output of an algorithm for predictive data compression of hyperspectral imagery so as to allow efficient parallelization in both the compressor and decompressor. In these schemes, the compressor performs a number of iterations, during each of which a portion of the data is compressed via parallel threads operating on independent portions of the data. The general idea is that for each iteration it is predetermined how much compressed data will be produced from each thread.

  10. Segmentation in dermatological hyperspectral images: dedicated methods.

    PubMed

    Koprowski, Robert; Olczyk, Paweł

    2016-08-17

    Segmentation of hyperspectral medical images is one of many image segmentation methods which require profiling. This profiling involves either the adjustment of existing, known image segmentation methods or a proposal of new dedicated methods of hyperspectral image segmentation. Taking into consideration the size of analysed data, the time of analysis is of major importance. Therefore, the authors proposed three new dedicated methods of hyperspectral image segmentation with special reference to the time of analysis. The segmentation methods presented in this paper were tested and profiled to the images acquired from different hyperspectral cameras including SOC710 Hyperspectral Imaging System, Specim sCMOS-50-V10E. Correct functioning of the method was tested for over 10,000 2D images constituting the sequence of over 700 registrations of the areas of the left and right hand and the forearm. As a result, three new methods of hyperspectral image segmentation have been proposed: fast analysis of emissivity curves (SKE), 3D segmentation (S3D) and hierarchical segmentation (SH). They have the following features: are fully automatic; allow for implementation of fast segmentation methods; are profiled to hyperspectral image segmentation; use emissivity curves in the model form, can be applied in any type of objects not necessarily biological ones, are faster (SKE-2.3 ms, S3D-1949 ms, SH-844 ms for the computer with Intel(®) Core i7 4960X CPU 3.6 GHz) and more accurate (SKE-accuracy 79 %, S3D-90 %, SH-92 %) in comparison with typical methods known from the literature. Profiling and/or proposing new methods of hyperspectral image segmentation is an indispensable element of developing software. This ensures speed, repeatability and low sensitivity of the algorithm to changing parameters.

  11. Hyperspectral imaging utility for transportation systems

    NASA Astrophysics Data System (ADS)

    Bridgelall, Raj; Rafert, J. Bruce; Tolliver, Denver

    2015-03-01

    The global transportation system is massive, open, and dynamic. Existing performance and condition assessments of the complex interacting networks of roadways, bridges, railroads, pipelines, waterways, airways, and intermodal ports are expensive. Hyperspectral imaging is an emerging remote sensing technique for the non-destructive evaluation of multimodal transportation infrastructure. Unlike panchromatic, color, and infrared imaging, each layer of a hyperspectral image pixel records reflectance intensity from one of dozens or hundreds of relatively narrow wavelength bands that span a broad range of the electromagnetic spectrum. Hence, every pixel of a hyperspectral scene provides a unique spectral signature that offers new opportunities for informed decision-making in transportation systems development, operations, and maintenance. Spaceborne systems capture images of vast areas in a short period but provide lower spatial resolution than airborne systems. Practitioners use manned aircraft to achieve higher spatial and spectral resolution, but at the price of custom missions and narrow focus. The rapid size and cost reduction of unmanned aircraft systems promise a third alternative that offers hybrid benefits at affordable prices by conducting multiple parallel missions. This research formulates a theoretical framework for a pushbroom type of hyperspectral imaging system on each type of data acquisition platform. The study then applies the framework to assess the relative potential utility of hyperspectral imaging for previously proposed remote sensing applications in transportation. The authors also introduce and suggest new potential applications of hyperspectral imaging in transportation asset management, network performance evaluation, and risk assessments to enable effective and objective decision- and policy-making.

  12. Perceptual Based Image Fusion with Applications to Hyperspectral Image Data.

    DTIC Science & Technology

    1994-12-01

    spectral bands from the AVIRIS hyperspectral sensor will be evaluated. 1.4 Approach/ Thesis Organization Chapter one described data processing problems...Based Image Fusion with Applications to Hyperspectral Image Data THESIS A o .:or \\Terry Allen Wilson NTS _ Captain, USAF DTIC Tf-, LI Unannou!c<ej LI...Applications to Hyperspectral Image Data THESIS Presented to the Faculty of the Graduate School of Engineering of the Air Force Institute of

  13. Hyperspectral imaging and its applications

    NASA Astrophysics Data System (ADS)

    Serranti, S.; Bonifazi, G.

    2016-04-01

    Hyperspectral imaging (HSI) is an emerging technique that combines the imaging properties of a digital camera with the spectroscopic properties of a spectrometer able to detect the spectral attributes of each pixel in an image. For these characteristics, HSI allows to qualitatively and quantitatively evaluate the effects of the interactions of light with organic and/or inorganic materials. The results of this interaction are usually displayed as a spectral signature characterized by a sequence of energy values, in a pre-defined wavelength interval, for each of the investigated/collected wavelength. Following this approach, it is thus possible to collect, in a fast and reliable way, spectral information that are strictly linked to chemical-physical characteristics of the investigated materials and/or products. Considering that in an hyperspectral image the spectrum of each pixel can be analyzed, HSI can be considered as one of the best nondestructive technology allowing to perform the most accurate and detailed information extraction. HSI can be applied in different wavelength fields, the most common are the visible (VIS: 400-700 nm), the near infrared (NIR: 1000-1700 nm) and the short wave infrared (SWIR: 1000-2500 nm). It can be applied for inspections from micro- to macro-scale, up to remote sensing. HSI produces a large amount of information due to the great number of continuous collected spectral bands. Such an approach, when successful, is quite challenging being usually reliable, robust and characterized by lower costs, if compared with those usually associated to commonly applied analytical off-line and/or on-line analytical approaches. More and more applications have been thus developed and tested, in these last years, especially in food inspection, with a large range of investigated products, such as fruits and vegetables, meat, fish, eggs and cereals, but also in medicine and pharmaceutical sector, in cultural heritage, in material characterization and in

  14. Novel hyperspectral imager for lightweight UAVs

    NASA Astrophysics Data System (ADS)

    Saari, Heikki; Aallos, Ville-Veikko; Holmlund, Christer; Mäkynen, Jussi; Delauré, Bavo; Nackaerts, Kris; Michiels, Bart

    2010-04-01

    VTT Technical Research Centre of Finland has developed a new miniaturized staring hyperspectral imager with a weight of 350 g making the system compatible with lightweight UAS platforms. The instrument is able to record 2D spatial images at the selected wavelength bands simultaneously. The concept of the hyperspectral imager has been published in the SPIE Proc. 74741. The operational wavelength range of the imager can be tuned in the range 400 - 1100 nm and spectral resolution is in the range 5 - 10 nm @ FWHM. Presently the spatial resolution is 480 × 750 pixels but it can be increased simply by changing the image sensor. The field of view of the system is 20 × 30 degrees and ground pixel size at 100 m flying altitude is around 7.5 cm. The system contains batteries, image acquisition control system and memory for the image data. It can operate autonomously recording hyperspectral data cubes continuously or controlled by the autopilot system of the UAS. The new hyperspectral imager prototype was first tried in co-operation with the Flemish Institute for Technological Research (VITO) on their UAS helicopter. The instrument was configured for the spectral range 500 - 900 nm selected for the vegetation and natural water monitoring applications. The design of the UAS hyperspectral imager and its characterization results together with the analysis of the spectral data from first test flights will be presented.

  15. Portable Hyperspectral Imaging Broadens Sensing Horizons

    NASA Technical Reports Server (NTRS)

    2007-01-01

    Broadband multispectral imaging can be very helpful in showing differences in energy being radiated and is often employed by NASA satellites to monitor temperature and climate changes. In addition, hyperspectral imaging is ideal for advanced laboratory uses, biomedical imaging, forensics, counter-terrorism, skin health, food safety, and Earth imaging. Lextel Intelligence Systems, LLC, of Jackson, Mississippi purchased Photon Industries Inc., a spinoff company of NASA's Stennis Space Center and the Institute for Technology Development dedicated to developing new hyperspectral imaging technologies. Lextel has added new features to and expanded the applicability of the hyperspectral imaging systems. It has made advances in the size, usability, and cost of the instruments. The company now offers a suite of turnkey hyperspectral imaging systems based on the original NASA groundwork. It currently has four lines of hyperspectral imaging products: the EagleEye VNIR 100E, the EagleEye SWIR 100E, the EagleEye SWIR 200E, and the EagleEye UV 100E. These Lextel instruments are used worldwide for a wide variety of applications including medical, military, forensics, and food safety.

  16. Hyperspectral Imaging of the Coastal Ocean

    DTIC Science & Technology

    2008-01-01

    only 30% of the variance is resolved at 300 m for the data from the 15th. This well mixed case is more typical for many coastal regions. 1 (A) 710...demonstrated that spaceborne hyperspectral remote sensing is the best approach to covertly acquire data on shallow water bathymetry, bottom types, hazards...a hyperspectral imager in space to demonstrate the ability to covertly acquire data on shallow water bathymetry, bottom types, hazards to navigation

  17. Uncooled long-wave infrared hyperspectral imaging

    NASA Technical Reports Server (NTRS)

    Lucey, Paul G. (Inventor)

    2006-01-01

    A long-wave infrared hyperspectral sensor device employs a combination of an interferometer with an uncooled microbolometer array camera to produce hyperspectral images without the use of bulky, power-hungry motorized components, making it suitable for UAV vehicles, small mobile platforms, or in extraterrestrial environments. The sensor device can provide signal-to-noise ratios near 200 for ambient temperature scenes with 33 wavenumber resolution at a frame rate of 50 Hz, with higher results indicated by ongoing component improvements.

  18. Designing microarray phantoms for hyperspectral imaging validation

    PubMed Central

    Clarke, Matthew L.; Lee, Ji Youn; Samarov, Daniel V.; Allen, David W.; Litorja, Maritoni; Nossal, Ralph; Hwang, Jeeseong

    2012-01-01

    The design and fabrication of custom-tailored microarrays for use as phantoms in the characterization of hyperspectral imaging systems is described. Corresponding analysis methods for biologically relevant samples are also discussed. An image-based phantom design was used to program a microarrayer robot to print prescribed mixtures of dyes onto microscope slides. The resulting arrays were imaged by a hyperspectral imaging microscope. The shape of the spots results in significant scattering signals, which can be used to test image analysis algorithms. Separation of the scattering signals allowed elucidation of individual dye spectra. In addition, spectral fitting of the absorbance spectra of complex dye mixtures was performed in order to determine local dye concentrations. Such microarray phantoms provide a robust testing platform for comparisons of hyperspectral imaging acquisition and analysis methods. PMID:22741076

  19. Hyperspectral Image Sharpening Based on Ehlers Fusion

    NASA Astrophysics Data System (ADS)

    Xu, S.; Ehlers, M.

    2017-09-01

    As the application of hyperspectral images is increasing, many researchers attempt to extend existing pansharpening techniques to hyperspectral images. This paper focuses on the application of Ehlers fusion to hyperspectral image sharpening. Ehlers fusion involves two crucial algorithms: filter technique in the frequency domain and intensity transform. In this study, different filter types and intensity transform methods were analysed separately. With a combination of filter types and intensity transforms, the fusion procedure was implemented to test data sets. The spectral profiles of the pixels of the images were then used as a tool to control the quality of the fused image. Finally, the performance of Ehlers fusion is compared with Principle Component (PC) analysis, Gram-Schmidt transform (Gram-Schmidt), High-Pass Filtering in the spatial domain (HPF), and Wavelet Principal Component (Wavelet-PC) analysis using the same input data. The comparison shows that Ehlers high-pass filter fusion shows outstanding performance both on spatial enhancement and colour preservation.

  20. [Decomposition of Interference Hyperspectral Images Using Improved Morphological Component Analysis].

    PubMed

    Wen, Jia; Zhao, Jun-suo; Wang, Cai-ling; Xia, Yu-li

    2016-01-01

    As the special imaging principle of the interference hyperspectral image data, there are lots of vertical interference stripes in every frames. The stripes' positions are fixed, and their pixel values are very high. Horizontal displacements also exist in the background between the frames. This special characteristics will destroy the regular structure of the original interference hyperspectral image data, which will also lead to the direct application of compressive sensing theory and traditional compression algorithms can't get the ideal effect. As the interference stripes signals and the background signals have different characteristics themselves, the orthogonal bases which can sparse represent them will also be different. According to this thought, in this paper the morphological component analysis (MCA) is adopted to separate the interference stripes signals and background signals. As the huge amount of interference hyperspectral image will lead to glow iterative convergence speed and low computational efficiency of the traditional MCA algorithm, an improved MCA algorithm is also proposed according to the characteristics of the interference hyperspectral image data, the conditions of iterative convergence is improved, the iteration will be terminated when the error of the separated image signals and the original image signals are almost unchanged. And according to the thought that the orthogonal basis can sparse represent the corresponding signals but cannot sparse represent other signals, an adaptive update mode of the threshold is also proposed in order to accelerate the computational speed of the traditional MCA algorithm, in the proposed algorithm, the projected coefficients of image signals at the different orthogonal bases are calculated and compared in order to get the minimum value and the maximum value of threshold, and the average value of them is chosen as an optimal threshold value for the adaptive update mode. The experimental results prove that

  1. MEMS FPI-based smartphone hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Rissanen, Anna; Saari, Heikki; Rainio, Kari; Stuns, Ingmar; Viherkanto, Kai; Holmlund, Christer; Näkki, Ismo; Ojanen, Harri

    2016-05-01

    This paper demonstrates a mobile phone- compatible hyperspectral imager based on a tunable MEMS Fabry-Perot interferometer. The realized iPhone 5s hyperspectral imager (HSI) demonstrator utilizes MEMS FPI tunable filter for visible-range, which consist of atomic layer deposited (ALD) Al2O3/TiO2-thin film Bragg reflectors. Characterization results for the mobile phone hyperspectral imager utilizing MEMS FPI chip optimized for 500 nm is presented; the operation range is λ = 450 - 550 nm with FWHM between 8 - 15 nm. Also a configuration of two cascaded FPIs (λ = 500 nm and λ = 650 nm) combined with an RGB colour camera is presented. With this tandem configuration, the overall wavelength tuning range of MEMS hyperspectral imagers can be extended to cover a larger range than with a single FPI chip. The potential applications of mobile hyperspectral imagers in the vis-NIR range include authentication, counterfeit detection and potential health/wellness and food sensing applications.

  2. Hyperspectral IASI L1C Data Compression

    PubMed Central

    García-Sobrino, Joaquín; Serra-Sagristà, Joan; Bartrina-Rapesta, Joan

    2017-01-01

    The Infrared Atmospheric Sounding Interferometer (IASI), implemented on the MetOp satellite series, represents a significant step forward in atmospheric forecast and weather understanding. The instrument provides infrared soundings of unprecedented accuracy and spectral resolution to derive humidity and atmospheric temperature profiles, as well as some of the chemical components playing a key role in climate monitoring. IASI collects rich spectral information, which results in large amounts of data (about 16 Gigabytes per day). Efficient compression techniques are requested for both transmission and storage of such huge data. This study reviews the performance of several state of the art coding standards and techniques for IASI L1C data compression. Discussion embraces lossless, near-lossless and lossy compression. Several spectral transforms, essential to achieve improved coding performance due to the high spectral redundancy inherent to IASI products, are also discussed. Illustrative results are reported for a set of 96 IASI L1C orbits acquired over a full year (4 orbits per month for each IASI-A and IASI-B from July 2013 to June 2014) . Further, this survey provides organized data and facts to assist future research and the atmospheric scientific community. PMID:28621705

  3. 1D hyperspectral images of a light emitting diodes array

    NASA Astrophysics Data System (ADS)

    Urzica (Iordache), I.; Damian, V.; Logofatu, P. C.; Apostol, D.; Vasile, T.; Udrea, C.

    2015-02-01

    The paper present our first steps to realize a hyperspectral imaging system. Preliminary experiments in the domain have as purpose to test the capability of a monochromator with a 2D linear CCD camera, to create hyperspectral images. Using a Sciencetech 9055 model monochromator with a Hamamatsu CCD, we have analyzed an array of three LEDs of various colors, obtaining 1D hyperspectral images.

  4. Tongue Tumor Detection in Medical Hyperspectral Images

    PubMed Central

    Liu, Zhi; Wang, Hongjun; Li, Qingli

    2012-01-01

    A hyperspectral imaging system to measure and analyze the reflectance spectra of the human tongue with high spatial resolution is proposed for tongue tumor detection. To achieve fast and accurate performance for detecting tongue tumors, reflectance data were collected using spectral acousto-optic tunable filters and a spectral adapter, and sparse representation was used for the data analysis algorithm. Based on the tumor image database, a recognition rate of 96.5% was achieved. The experimental results show that hyperspectral imaging for tongue tumor diagnosis, together with the spectroscopic classification method provide a new approach for the noninvasive computer-aided diagnosis of tongue tumors. PMID:22368462

  5. Hyperspectral imager development at Army Research Laboratory

    NASA Astrophysics Data System (ADS)

    Gupta, Neelam

    2008-04-01

    Development of robust compact optical imagers that can acquire both spectral and spatial features from a scene of interest is of utmost importance for standoff detection of chemical and biological agents as well as targets and backgrounds. Spectral features arise due to the material properties of objects as a result of the emission, reflection, and absorption of light. Using hyperspectral imaging one can acquire images with narrow spectral bands and take advantage of the characteristic spectral signatures of different materials making up the scene in detection of objects. Traditional hyperspectral imaging systems use gratings and prisms that acquire one-dimensional spectral images and require relative motion of sensor and scene in addition to data processing to form a two-dimensional image cube. There is much interest in developing hyperspectral imagers using tunable filters that acquire a two-dimensional spectral image and build up an image cube as a function of time. At the Army Research Laboratory (ARL), we are developing hyperspectral imagers using a number of novel tunable filter technologies. These include acousto-optic tunable filters (AOTFs) that can provide adaptive no-moving-parts imagers from the UV to the long wave infrared, diffractive optics technology that can provide image cubes either in a single spectral region or simultaneously in different spectral regions using a single moving lens or by using a lenslet array, and micro-electromechanical systems (MEMS)-based Fabry-Perot (FP) tunable etalons to develop miniature sensors that take advantage of the advances in microfabrication and packaging technologies. New materials are being developed to design AOTFs and a full Stokes polarization imager has been developed, diffractive optics lenslet arrays are being explored, and novel FP tunable filters are under fabrication for the development of novel miniature hyperspectral imagers. Here we will brief on all the technologies being developed and present

  6. Lossless compression of 3D hyperspectral sounder data using the wavelet and Burrows-Wheeler transforms

    NASA Astrophysics Data System (ADS)

    Wei, Shih-Chieh; Huang, Bormin

    2004-10-01

    Hyperspectral sounder data is used for retrieval of useful geophysical parameters which promise better weather prediction. It features two characteristics. First it is huge in size with 2D spatial coverage and high spectral resolution in the infrared region. Second it allows low tolerance of noise and error in retrieving the geophysical parameters where a mathematically ill-posed problem is involved. Therefore compression is better to be lossless or near lossless for data transfer and archive. Meanwhile medical data from X-ray computerized tomography (CT) or magnetic resonance imaging (MRI) techniques also possesses similar characteristics. It provides motivation to apply lossless compression schemes for medical data to the hyperspectral sounder data. In this paper, we explore the use of a wavelet-based lossless data compression scheme for the 3D hyperspectral data which uses in sequence a forward difference scheme, an integer wavelet transform, a Burrows-Wheeler transform and an arithmetic coder. Compared to previous work, our approach is shown to outperform the CALIC and 3D EZW schemes.

  7. Near-infrared hyperspectral imaging for quality analysis of agricultural and food products

    NASA Astrophysics Data System (ADS)

    Singh, C. B.; Jayas, D. S.; Paliwal, J.; White, N. D. G.

    2010-04-01

    Agricultural and food processing industries are always looking to implement real-time quality monitoring techniques as a part of good manufacturing practices (GMPs) to ensure high-quality and safety of their products. Near-infrared (NIR) hyperspectral imaging is gaining popularity as a powerful non-destructive tool for quality analysis of several agricultural and food products. This technique has the ability to analyse spectral data in a spatially resolved manner (i.e., each pixel in the image has its own spectrum) by applying both conventional image processing and chemometric tools used in spectral analyses. Hyperspectral imaging technique has demonstrated potential in detecting defects and contaminants in meats, fruits, cereals, and processed food products. This paper discusses the methodology of hyperspectral imaging in terms of hardware, software, calibration, data acquisition and compression, and development of prediction and classification algorithms and it presents a thorough review of the current applications of hyperspectral imaging in the analyses of agricultural and food products.

  8. ICER-3D: A Progressive Wavelet-Based Compressor for Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Kiely, A.; Klimesh, M.; Xie, H.; Aranki, N.

    2005-01-01

    ICER-3D is a progressive, wavelet-based compressor for hyperspectral images. ICER-3D is derived from the ICER image compressor. ICER-3D can provide lossless and lossy compression, and incorporates an error-containment scheme to limit the effects of data loss during transmission. The three-dimensional wavelet decomposition structure used by ICER-3D exploits correlations in all three dimensions of hyperspectral data sets, while facilitating elimination of spectral ringing artifacts. Correlation is further exploited by a context modeler that effectively exploits spectral dependencies in the wavelet-transformed hyperspectral data. Performance results illustrating the benefits of these features are presented.

  9. Fractal image compression

    NASA Technical Reports Server (NTRS)

    Barnsley, Michael F.; Sloan, Alan D.

    1989-01-01

    Fractals are geometric or data structures which do not simplify under magnification. Fractal Image Compression is a technique which associates a fractal to an image. On the one hand, the fractal can be described in terms of a few succinct rules, while on the other, the fractal contains much or all of the image information. Since the rules are described with less bits of data than the image, compression results. Data compression with fractals is an approach to reach high compression ratios for large data streams related to images. The high compression ratios are attained at a cost of large amounts of computation. Both lossless and lossy modes are supported by the technique. The technique is stable in that small errors in codes lead to small errors in image data. Applications to the NASA mission are discussed.

  10. New Application of Hyperspectral Imaging for Bacterial Cell Classification

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral microscopy has shown potential as a method for rapid detection of foodborne pathogenic bacteria with spectral characteristics from bacterial cells. Hyperspectral microscope images (HMIs) are collected from broiler chicken isolates of Salmonella serotypes Enteritidis, Typhimurium, Infa...

  11. Biometric study using hyperspectral imaging during stress

    NASA Astrophysics Data System (ADS)

    Nagaraj, Sheela; Quoraishee, Shafik; Chan, Gabriel; Short, Kenneth R.

    2010-04-01

    To the casual observer, transient stress results in a variety of physiological changes that can be seen in the face. Although the conditions can be seen visibly, the conditions affect the emissivity and absorption properties of the skin, which imaging spectrometers, commonly referred to as Hyperspectral (HS) cameras, can quantify at every image pixel. The study reported on in this paper, using Hyperspectral cameras, provides a basis for continued study of HS imaging to eventually quantify biometric stress. This study was limited to the visible to near infrared (VNIR) spectral range. Signal processing tools and algorithms have been developed and are described for using HS face data from human subjects. The subjects were placed in psychologically stressful situations and the camera data were analyzed to detect stress through changes in dermal reflectance and emissivity. Results indicate that hyperspectral imaging may potentially serve as a non-invasive tool to measure changes in skin emissivity indicative of a stressful incident. Particular narrow spectral bands in the near-infrared region of the electromagnetic spectrum seem especially important. Further studies need to be performed to determine the optimal spectral bands and to generalize the conclusions. The enormous information available in hyperspectral imaging needs further analysis and more spectral regions need to be exploited. Non-invasive stress detection is a prominent area of research with countless applications for both military and commercial use including border patrol, stand-off interrogation, access control, surveillance, and non-invasive and un-attended patient monitoring.

  12. Compressive optical image encryption.

    PubMed

    Li, Jun; Sheng Li, Jiao; Yang Pan, Yang; Li, Rong

    2015-05-20

    An optical image encryption technique based on compressive sensing using fully optical means has been proposed. An object image is first encrypted to a white-sense stationary noise pattern using a double random phase encoding (DRPE) method in a Mach-Zehnder interferometer. Then, the encrypted image is highly compressed to a signal using single-pixel compressive holographic imaging in the optical domain. At the receiving terminal, the encrypted image is reconstructed well via compressive sensing theory, and the original image can be decrypted with three reconstructed holograms and the correct keys. The numerical simulations show that the method is effective and suitable for optical image security transmission in future all-optical networks because of the ability of completely optical implementation and substantially smaller hologram data volume.

  13. Compressive Optical Image Encryption

    PubMed Central

    Li, Jun; Sheng Li, Jiao; Yang Pan, Yang; Li, Rong

    2015-01-01

    An optical image encryption technique based on compressive sensing using fully optical means has been proposed. An object image is first encrypted to a white-sense stationary noise pattern using a double random phase encoding (DRPE) method in a Mach-Zehnder interferometer. Then, the encrypted image is highly compressed to a signal using single-pixel compressive holographic imaging in the optical domain. At the receiving terminal, the encrypted image is reconstructed well via compressive sensing theory, and the original image can be decrypted with three reconstructed holograms and the correct keys. The numerical simulations show that the method is effective and suitable for optical image security transmission in future all-optical networks because of the ability of completely optical implementation and substantially smaller hologram data volume. PMID:25992946

  14. Overview of NOAA's hyperspectral sounding data, communication, and compression activities

    NASA Astrophysics Data System (ADS)

    Heymann, Roger W.; Schmit, Timothy J.

    2004-10-01

    Instruments on the next generation operational GOES will generate an expected 50 times greater amount of data than their predecessors on today"s GOES. Part of this increase is due to the high-spectral resolution data from the Hyperspectral Environmental Suite (HES). The data increase led to the need to research the impact to the GOES satellite"s end-to-end communication system, and research compression of hyper-spectral sounder sensor data. The compression research, in mathematics includes, but is not limited to, wavelets, principal components, adaptive clustering, empirical mode decomposition. The high data rates require additional RF spectrum, in the congested 8025-8400 MHz band X-band. Congestion in the geo orbit X and L-bands mandate extensive efforts to control out-of-band RF emissions. The need for communication signal data quality with few errors (low BER) is essential for NOAA science use. Limited bandwidth and the need to be efficient in bandwidth use, force the consideration of bandwidth efficient modulations. These communication issues force the use of the latest technologies. The research has shown that GOES will be able to downlink all of the future sensor data, and could continue to be used as a communication satellite to distribute large volumes of its sensor information to U.S. and foreign users.

  15. LIFTERS-hyperspectral imaging at LLNL

    SciTech Connect

    Fields, D.; Bennett, C.; Carter, M.

    1994-11-15

    LIFTIRS, the Livermore Imaging Fourier Transform InfraRed Spectrometer, recently developed at LLNL, is an instrument which enables extremely efficient collection and analysis of hyperspectral imaging data. LIFTIRS produces a spatial format of 128x128 pixels, with spectral resolution arbitrarily variable up to a maximum of 0.25 inverse centimeters. Time resolution and spectral resolution can be traded off for each other with great flexibility. We will discuss recent measurements made with this instrument, and present typical images and spectra.

  16. Image compression technique

    DOEpatents

    Fu, C.Y.; Petrich, L.I.

    1997-03-25

    An image is compressed by identifying edge pixels of the image; creating a filled edge array of pixels each of the pixels in the filled edge array which corresponds to an edge pixel having a value equal to the value of a pixel of the image array selected in response to the edge pixel, and each of the pixels in the filled edge array which does not correspond to an edge pixel having a value which is a weighted average of the values of surrounding pixels in the filled edge array which do correspond to edge pixels; and subtracting the filled edge array from the image array to create a difference array. The edge file and the difference array are then separately compressed and transmitted or stored. The original image is later reconstructed by creating a preliminary array in response to the received edge file, and adding the preliminary array to the received difference array. Filling is accomplished by solving Laplace`s equation using a multi-grid technique. Contour and difference file coding techniques also are described. The techniques can be used in a method for processing a plurality of images by selecting a respective compression approach for each image, compressing each of the images according to the compression approach selected, and transmitting each of the images as compressed, in correspondence with an indication of the approach selected for the image. 16 figs.

  17. Image compression technique

    DOEpatents

    Fu, Chi-Yung; Petrich, Loren I.

    1997-01-01

    An image is compressed by identifying edge pixels of the image; creating a filled edge array of pixels each of the pixels in the filled edge array which corresponds to an edge pixel having a value equal to the value of a pixel of the image array selected in response to the edge pixel, and each of the pixels in the filled edge array which does not correspond to an edge pixel having a value which is a weighted average of the values of surrounding pixels in the filled edge array which do correspond to edge pixels; and subtracting the filled edge array from the image array to create a difference array. The edge file and the difference array are then separately compressed and transmitted or stored. The original image is later reconstructed by creating a preliminary array in response to the received edge file, and adding the preliminary array to the received difference array. Filling is accomplished by solving Laplace's equation using a multi-grid technique. Contour and difference file coding techniques also are described. The techniques can be used in a method for processing a plurality of images by selecting a respective compression approach for each image, compressing each of the images according to the compression approach selected, and transmitting each of the images as compressed, in correspondence with an indication of the approach selected for the image.

  18. FPGA implementation of the hyperspectral Lossy Compression for Exomars (LCE) algorithm

    NASA Astrophysics Data System (ADS)

    García, Aday; Santos, L.; López, S.; Callicó, G. M.; López, J. F.; Sarmiento, R.

    2014-10-01

    The increase of data rates and data volumes in present remote sensing payload instruments, together with the restrictions imposed in the downlink connection requirements, represent at the same time a challenge and a must in the field of data and image compression. This is especially true for the case of hyperspectral images, in which both, reduction of spatial and spectral redundancy is mandatory. Recently the Consultative Committee for Space Data Systems (CCSDS) published the Lossless Multispectral and Hyperespectral Image Compression recommendation (CCSDS 123), a prediction-based technique resulted from the consensus of its members. Although this standard offers a good trade-off between coding performance and computational complexity, the appearance of future hyperspectral and ultraspectral sensors with vast amount of data imposes further efforts from the scientific community to ensure optimal transmission to ground stations based on greater compression rates. Furthermore, hardware implementations with specific features to deal with solar radiation problems play an important role in order to achieve real time applications. In this scenario, the Lossy Compression for Exomars (LCE) algorithm emerges as a good candidate to achieve these characteristics. Its good quality/compression ratio together with its low complexity facilitates the implementation in hardware platforms such as FPGAs or ASICs. In this work the authors present the implementation of the LCE algorithm into an antifuse-based FPGA and the optimizations carried out to obtain the RTL description code using CatapultC, a High Level Synthesis (HLS) Tool. Experimental results show an area occupancy of 75% in an RTAX2000 FPGA from Microsemi, with an operating frequency of 18 MHz. Additionally, the power budget obtained is presented giving an idea of the suitability of the proposed algorithm implementation for onboard compression applications.

  19. Metric Learning to Enhance Hyperspectral Image Segmentation

    NASA Technical Reports Server (NTRS)

    Thompson, David R.; Castano, Rebecca; Bue, Brian; Gilmore, Martha S.

    2013-01-01

    Unsupervised hyperspectral image segmentation can reveal spatial trends that show the physical structure of the scene to an analyst. They highlight borders and reveal areas of homogeneity and change. Segmentations are independently helpful for object recognition, and assist with automated production of symbolic maps. Additionally, a good segmentation can dramatically reduce the number of effective spectra in an image, enabling analyses that would otherwise be computationally prohibitive. Specifically, using an over-segmentation of the image instead of individual pixels can reduce noise and potentially improve the results of statistical post-analysis. In this innovation, a metric learning approach is presented to improve the performance of unsupervised hyperspectral image segmentation. The prototype demonstrations attempt a superpixel segmentation in which the image is conservatively over-segmented; that is, the single surface features may be split into multiple segments, but each individual segment, or superpixel, is ensured to have homogenous mineralogy.

  20. Wide area Hyperspectral Motion Imaging

    DTIC Science & Technology

    2017-02-03

    interest . However, traditional kinematic data based tracking algorithms have challenges in wide area motion imagery due to a relatively low...sampling rate , low spatial resolution, occlusions, changes in lighting, and multiple confusers. Recent studies have shown that incorporating hyperspectral...For example, to cover 64 km2 at a ground sampling distance of 0.5m, an update rate of 1Hz, and up to 256 spectral bands, a dispersive grating

  1. Illumination system characterization for hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Katrašnik, Jaka; Pernuš, Franjo; Likar, Boštjan

    2011-03-01

    Near-infrared hyperspectral imaging is becoming a popular tool in the biomedical field, especially for detection and analysis of different types of cancers, analysis of skin burns and bruises, imaging of blood vessels and for many other applications. As in all imaging systems, proper illumination is crucial to attain optimal image quality that is needed for best performance of image analysis algorithms. In hyperspectral imaging based on filters (AOTF, LCTF and filter wheel) the acquired spectral signature has to be representative in all parts of the imaged object. Therefore, the whole object must be equally well illuminated - without shadows and specular reflections. As there are no restrictions imposed on the material and geometry of the object, the desired object illumination can only be achieved with completely diffuse illumination. In order to minimize shadows and specular reflections in diffuse illumination the light illuminating the object must be spatially, angularly and spectrally uniform. We present and test two diffuse illumination system designs that try to achieve optimal uniformity of the above mentioned properties. The illumination uniformity properties were measured with an AOTF based hyperspectral imaging system utilizing a standard white diffuse reflectance target and a specially designed calibration target for estimating the spatial and angular illumination uniformity.

  2. Hyperspectral imaging using RGB color for foodborne pathogen detection

    USDA-ARS?s Scientific Manuscript database

    This paper reports the latest development of a color vision technique for detecting colonies of foodborne pathogens grown on agar plates with a hyperspectral image classification model that was developed using full hyperspectral data. The hyperspectral classification model depended on reflectance sp...

  3. Mapping Soil Organic Matter with Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Moni, Christophe; Burud, Ingunn; Flø, Andreas; Rasse, Daniel

    2014-05-01

    Soil organic matter (SOM) plays a central role for both food security and the global environment. Soil organic matter is the 'glue' that binds soil particles together, leading to positive effects on soil water and nutrient availability for plant growth and helping to counteract the effects of erosion, runoff, compaction and crusting. Hyperspectral measurements of samples of soil profiles have been conducted with the aim of mapping soil organic matter on a macroscopic scale (millimeters and centimeters). Two soil profiles have been selected from the same experimental site, one from a plot amended with biochar and another one from a control plot, with the specific objective to quantify and map the distribution of biochar in the amended profile. The soil profiles were of size (30 x 10 x 10) cm3 and were scanned with two pushbroomtype hyperspectral cameras, one which is sensitive in the visible wavelength region (400 - 1000 nm) and one in the near infrared region (1000 - 2500 nm). The images from the two detectors were merged together into one full dataset covering the whole wavelength region. Layers of 15 mm were removed from the 10 cm high sample such that a total of 7 hyperspectral images were obtained from the samples. Each layer was analyzed with multivariate statistical techniques in order to map the different components in the soil profile. Moreover, a 3-dimensional visalization of the components through the depth of the sample was also obtained by combining the hyperspectral images from all the layers. Mid-infrared spectroscopy of selected samples of the measured soil profiles was conducted in order to correlate the chemical constituents with the hyperspectral results. The results show that hyperspectral imaging is a fast, non-destructive technique, well suited to characterize soil profiles on a macroscopic scale and hence to map elements and different organic matter quality present in a complete pedon. As such, we were able to map and quantify biochar in our

  4. Compressed image deblurring

    NASA Astrophysics Data System (ADS)

    Xu, Yuquan; Hu, Xiyuan; Peng, Silong

    2014-03-01

    We propose an algorithm to recover the latent image from the blurred and compressed input. In recent years, although many image deblurring algorithms have been proposed, most of the previous methods do not consider the compression effect in blurry images. Actually, it is unavoidable in practice that most of the real-world images are compressed. This compression will introduce a typical kind of noise, blocking artifacts, which do not meet the Gaussian distribution assumed in most existing algorithms. Without properly handling this non-Gaussian noise, the recovered image will suffer severe artifacts. Inspired by the statistic property of compression error, we model the non-Gaussian noise as hyper-Laplacian distribution. Based on this model, an efficient nonblind image deblurring algorithm based on variable splitting technique is proposed to solve the resulting nonconvex minimization problem. Finally, we also address an effective blind image deblurring algorithm which can deal with the compressed and blurred images efficiently. Extensive experiments compared with state-of-the-art nonblind and blind deblurring methods demonstrate the effectiveness of the proposed method.

  5. Nonnegative Matrix Factorization for Efficient Hyperspectral Image Projection

    NASA Technical Reports Server (NTRS)

    Iacchetta, Alexander S.; Fienup, James R.; Leisawitz, David T.; Bolcar, Matthew R.

    2015-01-01

    Hyperspectral imaging for remote sensing has prompted development of hyperspectral image projectors that can be used to characterize hyperspectral imaging cameras and techniques in the lab. One such emerging astronomical hyperspectral imaging technique is wide-field double-Fourier interferometry. NASA's current, state-of-the-art, Wide-field Imaging Interferometry Testbed (WIIT) uses a Calibrated Hyperspectral Image Projector (CHIP) to generate test scenes and provide a more complete understanding of wide-field double-Fourier interferometry. Given enough time, the CHIP is capable of projecting scenes with astronomically realistic spatial and spectral complexity. However, this would require a very lengthy data collection process. For accurate but time-efficient projection of complicated hyperspectral images with the CHIP, the field must be decomposed both spectrally and spatially in a way that provides a favorable trade-off between accurately projecting the hyperspectral image and the time required for data collection. We apply nonnegative matrix factorization (NMF) to decompose hyperspectral astronomical datacubes into eigenspectra and eigenimages that allow time-efficient projection with the CHIP. Included is a brief analysis of NMF parameters that affect accuracy, including the number of eigenspectra and eigenimages used to approximate the hyperspectral image to be projected. For the chosen field, the normalized mean squared synthesis error is under 0.01 with just 8 eigenspectra. NMF of hyperspectral astronomical fields better utilizes the CHIP's capabilities, providing time-efficient and accurate representations of astronomical scenes to be imaged with the WIIT.

  6. Nonnegative matrix factorization for efficient hyperspectral image projection

    NASA Astrophysics Data System (ADS)

    Iacchetta, Alexander S.; Fienup, James R.; Leisawitz, David T.; Bolcar, Matthew R.

    2015-09-01

    Hyperspectral imaging for remote sensing has prompted development of hyperspectral image projectors that can be used to characterize hyperspectral imaging cameras and techniques in the lab. One such emerging astronomical hyperspectral imaging technique is wide-field double-Fourier interferometry. NASA's current, state-of-the-art, Wide-field Imaging Interferometry Testbed (WIIT) uses a Calibrated Hyperspectral Image Projector (CHIP) to generate test scenes and provide a more complete understanding of wide-field double-Fourier interferometry. Given enough time, the CHIP is capable of projecting scenes with astronomically realistic spatial and spectral complexity. However, this would require a very lengthy data collection process. For accurate but time-efficient projection of complicated hyperspectral images with the CHIP, the field must be decomposed both spectrally and spatially in a way that provides a favorable trade-off between accurately projecting the hyperspectral image and the time required for data collection. We apply nonnegative matrix factorization (NMF) to decompose hyperspectral astronomical datacubes into eigenspectra and eigenimages that allow time-efficient projection with the CHIP. Included is a brief analysis of NMF parameters that affect accuracy, including the number of eigenspectra and eigenimages used to approximate the hyperspectral image to be projected. For the chosen field, the normalized mean squared synthesis error is under 0.01 with just 8 eigenspectra. NMF of hyperspectral astronomical fields better utilizes the CHIP's capabilities, providing time-efficient and accurate representations of astronomical scenes to be imaged with the WIIT.

  7. Illumination compensation in ground based hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Wendel, Alexander; Underwood, James

    2017-07-01

    Hyperspectral imaging has emerged as an important tool for analysing vegetation data in agricultural applications. Recently, low altitude and ground based hyperspectral imaging solutions have come to the fore, providing very high resolution data for mapping and studying large areas of crops in detail. However, these platforms introduce a unique set of challenges that need to be overcome to ensure consistent, accurate and timely acquisition of data. One particular problem is dealing with changes in environmental illumination while operating with natural light under cloud cover, which can have considerable effects on spectral shape. In the past this has been commonly achieved by imaging known reference targets at the time of data acquisition, direct measurement of irradiance, or atmospheric modelling. While capturing a reference panel continuously or very frequently allows accurate compensation for illumination changes, this is often not practical with ground based platforms, and impossible in aerial applications. This paper examines the use of an autonomous unmanned ground vehicle (UGV) to gather high resolution hyperspectral imaging data of crops under natural illumination. A process of illumination compensation is performed to extract the inherent reflectance properties of the crops, despite variable illumination. This work adapts a previously developed subspace model approach to reflectance and illumination recovery. Though tested on a ground vehicle in this paper, it is applicable to low altitude unmanned aerial hyperspectral imagery also. The method uses occasional observations of reference panel training data from within the same or other datasets, which enables a practical field protocol that minimises in-field manual labour. This paper tests the new approach, comparing it against traditional methods. Several illumination compensation protocols for high volume ground based data collection are presented based on the results. The findings in this paper are

  8. Spectral Reconstruction for Obtaining Virtual Hyperspectral Images

    NASA Astrophysics Data System (ADS)

    Perez, G. J. P.; Castro, E. C.

    2016-12-01

    Hyperspectral sensors demonstrated its capabalities in identifying materials and detecting processes in a satellite scene. However, availability of hyperspectral images are limited due to the high development cost of these sensors. Currently, most of the readily available data are from multi-spectral instruments. Spectral reconstruction is an alternative method to address the need for hyperspectral information. The spectral reconstruction technique has been shown to provide a quick and accurate detection of defects in an integrated circuit, recovers damaged parts of frescoes, and it also aids in converting a microscope into an imaging spectrometer. By using several spectral bands together with a spectral library, a spectrum acquired by a sensor can be expressed as a linear superposition of elementary signals. In this study, spectral reconstruction is used to estimate the spectra of different surfaces imaged by Landsat 8. Four atmospherically corrected surface reflectance from three visible bands (499 nm, 585 nm, 670 nm) and one near-infrared band (872 nm) of Landsat 8, and a spectral library of ground elements acquired from the United States Geological Survey (USGS) are used. The spectral library is limited to 420-1020 nm spectral range, and is interpolated at one nanometer resolution. Singular Value Decomposition (SVD) is used to calculate the basis spectra, which are then applied to reconstruct the spectrum. The spectral reconstruction is applied for test cases within the library consisting of vegetation communities. This technique was successful in reconstructing a hyperspectral signal with error of less than 12% for most of the test cases. Hence, this study demonstrated the potential of simulating information at any desired wavelength, creating a virtual hyperspectral sensor without the need for additional satellite bands.

  9. Image compression for dermatology

    NASA Astrophysics Data System (ADS)

    Cookson, John P.; Sneiderman, Charles; Colaianni, Joseph; Hood, Antoinette F.

    1990-07-01

    Color 35mm photographic slides are commonly used in dermatology for education, and patient records. An electronic storage and retrieval system for digitized slide images may offer some advantages such as preservation and random access. We have integrated a system based on a personal computer (PC) for digital imaging of 35mm slides that depict dermatologic conditions. Such systems require significant resources to accommodate the large image files involved. Methods to reduce storage requirements and access time through image compression are therefore of interest. This paper contains an evaluation of one such compression method that uses the Hadamard transform implemented on a PC-resident graphics processor. Image quality is assessed by determining the effect of compression on the performance of an image feature recognition task.

  10. Albedo recovery for hyperspectral image classification

    NASA Astrophysics Data System (ADS)

    Zhan, Kun; Wang, Haibo; Xie, Yuange; Zhang, Chutong; Min, Yufang

    2017-07-01

    Image intensity value is determined by both the albedo component and the shading component. The albedo component describes the physical nature of different objects at the surface of the earth, and land-cover classes are different from each other because of their intrinsic physical materials. We, therefore, recover the intrinsic albedo feature of the hyperspectral image to exploit the spatial semantic information. Then, we use the support vector machine (SVM) to classify the recovered intrinsic albedo hyperspectral image. The SVM tries to maximize the minimum margin to achieve good generalization performance. Experimental results show that the SVM with the intrinsic albedo feature method achieves a better classification performance than the state-of-the-art methods in terms of visual quality and three quantitative metrics.

  11. Piecewise flat embeddings for hyperspectral image analysis

    NASA Astrophysics Data System (ADS)

    Hayes, Tyler L.; Meinhold, Renee T.; Hamilton, John F.; Cahill, Nathan D.

    2017-05-01

    Graph-based dimensionality reduction techniques such as Laplacian Eigenmaps (LE), Local Linear Embedding (LLE), Isometric Feature Mapping (ISOMAP), and Kernel Principal Components Analysis (KPCA) have been used in a variety of hyperspectral image analysis applications for generating smooth data embeddings. Recently, Piecewise Flat Embeddings (PFE) were introduced in the computer vision community as a technique for generating piecewise constant embeddings that make data clustering / image segmentation a straightforward process. In this paper, we show how PFE arises by modifying LE, yielding a constrained ℓ1-minimization problem that can be solved iteratively. Using publicly available data, we carry out experiments to illustrate the implications of applying PFE to pixel-based hyperspectral image clustering and classification.

  12. Infrared hyperspectral imaging for chemical vapour detection

    NASA Astrophysics Data System (ADS)

    Ruxton, K.; Robertson, G.; Miller, W.; Malcolm, G. P. A.; Maker, G. T.; Howle, C. R.

    2012-10-01

    Active hyperspectral imaging is a valuable tool in a wide range of applications. One such area is the detection and identification of chemicals, especially toxic chemical warfare agents, through analysis of the resulting absorption spectrum. This work presents a selection of results from a prototype midwave infrared (MWIR) hyperspectral imaging instrument that has successfully been used for compound detection at a range of standoff distances. Active hyperspectral imaging utilises a broadly tunable laser source to illuminate the scene with light at a range of wavelengths. While there are a number of illumination methods, the chosen configuration illuminates the scene by raster scanning the laser beam using a pair of galvanometric mirrors. The resulting backscattered light from the scene is collected by the same mirrors and focussed onto a suitable single-point detector, where the image is constructed pixel by pixel. The imaging instrument that was developed in this work is based around an IR optical parametric oscillator (OPO) source with broad tunability, operating in the 2.6 to 3.7 μm (MWIR) and 1.5 to 1.8 μm (shortwave IR, SWIR) spectral regions. The MWIR beam was primarily used as it addressed the fundamental absorption features of the target compounds compared to the overtone and combination bands in the SWIR region, which can be less intense by more than an order of magnitude. We show that a prototype NCI instrument was able to locate hydrocarbon materials at distances up to 15 metres.

  13. Hyperspectral imaging for cancer surgical margin delineation: registration of hyperspectral and histological images

    NASA Astrophysics Data System (ADS)

    Lu, Guolan; Halig, Luma; Wang, Dongsheng; Chen, Zhuo G.; Fei, Baowei

    2014-03-01

    The determination of tumor margins during surgical resection remains a challenging task. A complete removal of malignant tissue and conservation of healthy tissue is important for the preservation of organ function, patient satisfaction, and quality of life. Visual inspection and palpation is not sufficient for discriminating between malignant and normal tissue types. Hyperspectral imaging (HSI) technology has the potential to noninvasively delineate surgical tumor margin and can be used as an intra-operative visual aid tool. Since histological images provide the ground truth of cancer margins, it is necessary to warp the cancer regions in ex vivo histological images back to in vivo hyperspectral images in order to validate the tumor margins detected by HSI and to optimize the imaging parameters. In this paper, principal component analysis (PCA) is utilized to extract the principle component bands of the HSI images, which is then used to register HSI images with the corresponding histological image. Affine registration is chosen to model the global transformation. A B-spline free form deformation (FFD) method is used to model the local non-rigid deformation. Registration experiment was performed on animal hyperspectral and histological images. Experimental results from animals demonstrated the feasibility of the hyperspectral imaging method for cancer margin detection.

  14. Hyperspectral Imaging for Cancer Surgical Margin Delineation: Registration of Hyperspectral and Histological Images

    PubMed Central

    Lu, Guolan; Halig, Luma; Wang, Dongsheng; Chen, Zhuo Georgia; Fei, Baowei

    2014-01-01

    The determination of tumor margins during surgical resection remains a challenging task. A complete removal of malignant tissue and conservation of healthy tissue is important for the preservation of organ function, patient satisfaction, and quality of life. Visual inspection and palpation is not sufficient for discriminating between malignant and normal tissue types. Hyperspectral imaging (HSI) technology has the potential to noninvasively delineate surgical tumor margin and can be used as an intra-operative visual aid tool. Since histological images provide the ground truth of cancer margins, it is necessary to warp the cancer regions in ex vivo histological images back to in vivo hyperspectral images in order to validate the tumor margins detected by HSI and to optimize the imaging parameters. In this paper, principal component analysis (PCA) is utilized to extract the principle component bands of the HSI images, which is then used to register HSI images with the corresponding histological image. Affine registration is chosen to model the global transformation. A B-spline free form deformation (FFD) method is used to model the local non-rigid deformation. Registration experiment was performed on animal hyperspectral and histological images. Experimental results from animals demonstrated the feasibility of the hyperspectral imaging method for cancer margin detection. PMID:25328640

  15. Miniaturization of a SWIR hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Warren, Christopher P.; Pfister, William; Even, Detlev; Velasco, Arleen; Yee, Selwyn; Breitwieser, David; Naungayan, Joseph

    2011-05-01

    A new approach for the design and fabrication of a miniaturized SWIR Hyperspectral imager is described. Previously, good results were obtained with a VNIR Hyperspectral imager, by use of light propagation within bonded solid blocks of fused silica. These designs use the Offner design form, providing excellent, low distortion imaging. The same idea is applied to the SWIR Hyperspectral imager here, resulting in a microHSITM SWIR Hyperspectral sensor, capable of operating in the 850-1700 nm wavelength range. The microHSI spectrometer weighs 910 g from slit input to camera output. This spectrometer can accommodate custom foreoptics to adapt to a wide range of fields-of-view (FOV). The current application calls for a 15 degree FOV, and utilizes an InGaAs image sensor with a spatial format of 640 x 25 micron pixels. This results in a slit length of 16 mm, and a foreoptics focal length of 61 mm, operating at F# = 2.8. The resulting IFOV is 417 μrad for this application, and a spectral dispersion of 4.17 nm/pixel. A prototype SWIR microHSI was fabricated, and the blazed diffraction grating was embedded within the optical blocks, resulting in a 72% diffraction efficiency at the wavelength of 1020 nm. This spectrometer design is capable of accommodating slit lengths of up to 25.6 mm, which opens up a wide variety of applications. The microHSI concepts can be extended to other wavelength regions, and a miniaturized LWIR microHSI sensor is in the conceptual design stage.

  16. Software for Simulation of Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Richtsmeier, Steven C.; Singer-Berk, Alexander; Bernstein, Lawrence S.

    2002-01-01

    A package of software generates simulated hyperspectral images for use in validating algorithms that generate estimates of Earth-surface spectral reflectance from hyperspectral images acquired by airborne and spaceborne instruments. This software is based on a direct simulation Monte Carlo approach for modeling three-dimensional atmospheric radiative transport as well as surfaces characterized by spatially inhomogeneous bidirectional reflectance distribution functions. In this approach, 'ground truth' is accurately known through input specification of surface and atmospheric properties, and it is practical to consider wide variations of these properties. The software can treat both land and ocean surfaces and the effects of finite clouds with surface shadowing. The spectral/spatial data cubes computed by use of this software can serve both as a substitute for and a supplement to field validation data.

  17. Synergetics Framework for Hyperspectral Image Classification

    NASA Astrophysics Data System (ADS)

    Müller, R.; Cerra, D.; Reinartz, P.

    2013-05-01

    In this paper a new classification technique for hyperspectral data based on synergetics theory is presented. Synergetics - originally introduced by the physicist H. Haken - is an interdisciplinary theory to find general rules for pattern formation through selforganization and has been successfully applied in fields ranging from biology to ecology, chemistry, cosmology, and thermodynamics up to sociology. Although this theory describes general rules for pattern formation it was linked also to pattern recognition. Pattern recognition algorithms based on synergetics theory have been applied to images in the spatial domain with limited success in the past, given their dependence on the rotation, shifting, and scaling of the images. These drawbacks can be discarded if such methods are applied to data acquired by a hyperspectral sensor in the spectral domain, as each single spectrum, related to an image element in the hyperspectral scene, can be analysed independently. The classification scheme based on synergetics introduces also methods for spatial regularization to get rid of "salt and pepper" classification results and for iterative parameter tuning to optimize class weights. The paper reports an experiment on a benchmark data set frequently used for method comparisons. This data set consists of a hyperspectral scene acquired by the Airborne Visible Infrared Imaging Spectrometer AVIRIS sensor of the Jet Propulsion Laboratory acquired over the Salinas Valley in CA, USA, with 15 vegetation classes. The results are compared to state-of-the-art methodologies like Support Vector Machines (SVM), Spectral Information Divergence (SID), Neural Networks, Logistic Regression, Factor Graphs or Spectral Angle Mapper (SAM). The outcomes are promising and often outperform state-of-the-art classification methodologies.

  18. Polarimetric Hyperspectral Imaging Systems and Applications

    NASA Technical Reports Server (NTRS)

    Cheng, Li-Jen; Mahoney, Colin; Reyes, George; Baw, Clayton La; Li, G. P.

    1996-01-01

    This paper reports activities in the development of AOTF Polarimetric Hyperspectral Imaging (PHI) Systems at JPL along with field observation results for illustrating the technology capabilities and advantages in remote sensing. In addition, the technology was also used to measure thickness distribution and structural imperfections of silicon-on-silicon wafers using white light interference phenomenon for demonstrating the potential in scientific and industrial applications.

  19. Image data compression investigation

    NASA Technical Reports Server (NTRS)

    Myrie, Carlos

    1989-01-01

    NASA continuous communications systems growth has increased the demand for image transmission and storage. Research and analysis was conducted on various lossy and lossless advanced data compression techniques or approaches used to improve the efficiency of transmission and storage of high volume stellite image data such as pulse code modulation (PCM), differential PCM (DPCM), transform coding, hybrid coding, interframe coding, and adaptive technique. In this presentation, the fundamentals of image data compression utilizing two techniques which are pulse code modulation (PCM) and differential PCM (DPCM) are presented along with an application utilizing these two coding techniques.

  20. Excitation-scanning hyperspectral imaging microscope.

    PubMed

    Favreau, Peter F; Hernandez, Clarissa; Heaster, Tiffany; Alvarez, Diego F; Rich, Thomas C; Prabhat, Prashant; Leavesley, Silas J

    2014-04-01

    Hyperspectral imaging is a versatile tool that has recently been applied to a variety of biomedical applications, notably live-cell and whole-tissue signaling. Traditional hyperspectral imaging approaches filter the fluorescence emission over a broad wavelength range while exciting at a single band. However, these emission-scanning approaches have shown reduced sensitivity due to light attenuation from spectral filtering. Consequently, emission scanning has limited applicability for time-sensitive studies and photosensitive applications. In this work, we have developed an excitation-scanning hyperspectral imaging microscope that overcomes these limitations by providing high transmission with short acquisition times. This is achieved by filtering the fluorescence excitation rather than the emission. We tested the efficacy of the excitation-scanning microscope in a side-by-side comparison with emission scanning for detection of green fluorescent protein (GFP)-expressing endothelial cells in highly autofluorescent lung tissue. Excitation scanning provided higher signal-to-noise characteristics, as well as shorter acquisition times (300  ms/wavelength band with excitation scanning versus 3  s/wavelength band with emission scanning). Excitation scanning also provided higher delineation of nuclear and cell borders, and increased identification of GFP regions in highly autofluorescent tissue. These results demonstrate excitation scanning has utility in a wide range of time-dependent and photosensitive applications.

  1. Excitation-scanning hyperspectral imaging microscope

    PubMed Central

    Favreau, Peter F.; Hernandez, Clarissa; Heaster, Tiffany; Alvarez, Diego F.; Rich, Thomas C.; Prabhat, Prashant; Leavesley, Silas J.

    2014-01-01

    Abstract. Hyperspectral imaging is a versatile tool that has recently been applied to a variety of biomedical applications, notably live-cell and whole-tissue signaling. Traditional hyperspectral imaging approaches filter the fluorescence emission over a broad wavelength range while exciting at a single band. However, these emission-scanning approaches have shown reduced sensitivity due to light attenuation from spectral filtering. Consequently, emission scanning has limited applicability for time-sensitive studies and photosensitive applications. In this work, we have developed an excitation-scanning hyperspectral imaging microscope that overcomes these limitations by providing high transmission with short acquisition times. This is achieved by filtering the fluorescence excitation rather than the emission. We tested the efficacy of the excitation-scanning microscope in a side-by-side comparison with emission scanning for detection of green fluorescent protein (GFP)-expressing endothelial cells in highly autofluorescent lung tissue. Excitation scanning provided higher signal-to-noise characteristics, as well as shorter acquisition times (300  ms/wavelength band with excitation scanning versus 3  s/wavelength band with emission scanning). Excitation scanning also provided higher delineation of nuclear and cell borders, and increased identification of GFP regions in highly autofluorescent tissue. These results demonstrate excitation scanning has utility in a wide range of time-dependent and photosensitive applications. PMID:24727909

  2. Hyperspectral imaging of skin and lung cancers

    NASA Astrophysics Data System (ADS)

    Zherdeva, Larisa A.; Bratchenko, Ivan A.; Alonova, Marina V.; Myakinin, Oleg O.; Artemyev, Dmitry N.; Moryatov, Alexander A.; Kozlov, Sergey V.; Zakharov, Valery P.

    2016-04-01

    The problem of cancer control requires design of new approaches for instrumental diagnostics, as the accuracy of cancer detection on the first step of diagnostics in clinics is slightly more than 50%. In this study, we present a method of visualization and diagnostics of skin and lung tumours based on registration and processing of tissues hyperspectral images. In a series of experiments registration of hyperspectral images of skin and lung tissue samples is carried out. Melanoma, basal cell carcinoma, nevi and benign tumours are studied in skin ex vivo and in vivo experiments; adenocarcinomas and squamous cell carcinomas are studied in ex vivo lung experiments. In a series of experiments the typical features of diffuse reflection spectra for pathological and normal tissues were found. Changes in tissues morphology during the tumour growth lead to the changes of blood and pigments concentration, such as melanin in skin. That is why tumours and normal tissues maybe differentiated with information about spectral response in 500-600 nm and 600 - 670 nm areas. Thus, hyperspectral imaging in the visible region may be a useful tool for cancer detection as it helps to estimate spectral properties of tissues and determine malignant regions for precise resection of tumours.

  3. Lossless to lossy compression for hyperspectral imagery based on wavelet and integer KLT transforms with 3D binary EZW

    NASA Astrophysics Data System (ADS)

    Cheng, Kai-jen; Dill, Jeffrey

    2013-05-01

    In this paper, a lossless to lossy transform based image compression of hyperspectral images based on Integer Karhunen-Loève Transform (IKLT) and Integer Discrete Wavelet Transform (IDWT) is proposed. Integer transforms are used to accomplish reversibility. The IKLT is used as a spectral decorrelator and the 2D-IDWT is used as a spatial decorrelator. The three-dimensional Binary Embedded Zerotree Wavelet (3D-BEZW) algorithm efficiently encodes hyperspectral volumetric image by implementing progressive bitplane coding. The signs and magnitudes of transform coefficients are encoded separately. Lossy and lossless compressions of signs are implemented by conventional EZW algorithm and arithmetic coding respectively. The efficient 3D-BEZW algorithm is applied to code magnitudes. Further compression can be achieved using arithmetic coding. The lossless and lossy compression performance is compared with other state of the art predictive and transform based image compression methods on Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) images. Results show that the 3D-BEZW performance is comparable to predictive algorithms. However, its computational cost is comparable to transform- based algorithms.

  4. Hyperspectral Transformation from EO-1 ALI Imagery Using Pseudo-Hyperspectral Image Synthesis Algorithm

    NASA Astrophysics Data System (ADS)

    Tien Hoang, Nguyen; Koike, Katsuaki

    2016-06-01

    Hyperspectral remote sensing is more effective than multispectral remote sensing in many application fields because of having hundreds of observation bands with high spectral resolution. However, hyperspectral remote sensing resources are limited both in temporal and spatial coverage. Therefore, simulation of hyperspectral imagery from multispectral imagery with a small number of bands must be one of innovative topics. Based on this background, we have recently developed a method, Pseudo-Hyperspectral Image Synthesis Algorithm (PHISA), to transform Landsat imagery into hyperspectral imagery using the correlation of reflectance at the corresponding bands between Landsat and EO-1 Hyperion data. This study extends PHISA to simulate pseudo-hyperspectral imagery from EO-1 ALI imagery. The pseudo-hyperspectral imagery has the same number of bands as that of high-quality Hyperion bands and the same swath width as ALI scene. The hyperspectral reflectance data simulated from the ALI data show stronger correlation with the original Hyperion data than the one simulated from Landsat data. This high correlation originates from the concurrent observation by the ALI and Hyperion sensors that are on-board the same satellite. The accuracy of simulation results are verified by a statistical analysis and a surface mineral mapping. With a combination of the advantages of both ALI and Hyperion image types, the pseudo-hyperspectral imagery is proved to be useful for detailed identification of minerals for the areas outside the Hyperion coverage.

  5. Combined hyperspatial and hyperspectral imaging spectrometer concept

    NASA Technical Reports Server (NTRS)

    Burke, Ian; Zwick, Harold

    1995-01-01

    There is a user need for increasing spatial and spectral resolution in Earth Observation (EO) optical instrumentation. Higher spectral resolution will be achieved by the introduction of spaceborne imaging spectrometers. Higher spatial resolutions of 1 - 3m will be achieved also, but at the expense of sensor redesign, higher communications bandwidth, high data processing volumes, and therefore, at the risk of time delays due to large volume data-handling bottlenecks. This paper discusses a design concept whereby the hyperspectral properties of a spaceborne imaging spectrometer can be used to increase the image spatial resolution, without such adverse cost impact.

  6. Hyperspectral all-sky imaging of auroras.

    PubMed

    Sigernes, Fred; Ivanov, Yuriy; Chernouss, Sergey; Trondsen, Trond; Roldugin, Alexey; Fedorenko, Yury; Kozelov, Boris; Kirillov, Andrey; Kornilov, Ilia; Safargaleev, Vladimir; Holmen, Silje; Dyrland, Margit; Lorentzen, Dag; Baddeley, Lisa

    2012-12-03

    A prototype auroral hyperspectral all-sky camera has been constructed and tested. It uses electro-optical tunable filters to image the night sky as a function of wavelength throughout the visible spectrum with no moving mechanical parts. The core optical system includes a new high power all-sky lens with F-number equal to f/1.1. The camera has been tested at the Kjell Henriksen Observatory (KHO) during the auroral season of 2011/2012. It detects all sub classes of aurora above ~½ of the sub visual 1kR green intensity threshold at an exposure time of only one second. Supervised classification of the hyperspectral data shows promise as a new method to process and identify auroral forms.

  7. Hyperspectral and multispectral imaging for evaluating food safety and quality

    USDA-ARS?s Scientific Manuscript database

    Spectral imaging technologies have been developed rapidly during the past decade. This paper presents hyperspectral and multispectral imaging technologies in the area of food safety and quality evaluation, with an introduction, demonstration, and summarization of the spectral imaging techniques avai...

  8. Hyperspectral image classification using Support Vector Machine

    NASA Astrophysics Data System (ADS)

    Moughal, T. A.

    2013-06-01

    Classification of land cover hyperspectral images is a very challenging task due to the unfavourable ratio between the number of spectral bands and the number of training samples. The focus in many applications is to investigate an effective classifier in terms of accuracy. The conventional multiclass classifiers have the ability to map the class of interest but the considerable efforts and large training sets are required to fully describe the classes spectrally. Support Vector Machine (SVM) is suggested in this paper to deal with the multiclass problem of hyperspectral imagery. The attraction to this method is that it locates the optimal hyper plane between the class of interest and the rest of the classes to separate them in a new high-dimensional feature space by taking into account only the training samples that lie on the edge of the class distributions known as support vectors and the use of the kernel functions made the classifier more flexible by making it robust against the outliers. A comparative study has undertaken to find an effective classifier by comparing Support Vector Machine (SVM) to the other two well known classifiers i.e. Maximum likelihood (ML) and Spectral Angle Mapper (SAM). At first, the Minimum Noise Fraction (MNF) was applied to extract the best possible features form the hyperspectral imagery and then the resulting subset of the features was applied to the classifiers. Experimental results illustrate that the integration of MNF and SVM technique significantly reduced the classification complexity and improves the classification accuracy.

  9. Hyperspectral Imaging for Defect Detection of Pickling Cucumber

    USDA-ARS?s Scientific Manuscript database

    This book chapter reviews the recent progress on hyperspectral imaging technology for defect inspection of pickling cucumbers. The chapter first describes near-infrared hyperspectral reflectance imaging technique for the detection of bruises on pickling cucumbers. The technique showed good detection...

  10. Ore minerals textural characterization by hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Bonifazi, Giuseppe; Picone, Nicoletta; Serranti, Silvia

    2013-02-01

    The utilization of hyperspectral detection devices, for natural resources mapping/exploitation through remote sensing techniques, dates back to the early 1970s. From the first devices utilizing a one-dimensional profile spectrometer, HyperSpectral Imaging (HSI) devices have been developed. Thus, from specific-customized devices, originally developed by Governmental Agencies (e.g. NASA, specialized research labs, etc.), a lot of HSI based equipment are today available at commercial level. Parallel to this huge increase of hyperspectral systems development/manufacturing, addressed to airborne application, a strong increase also occurred in developing HSI based devices for "ground" utilization that is sensing units able to play inside a laboratory, a processing plant and/or in an open field. Thanks to this diffusion more and more applications have been developed and tested in this last years also in the materials sectors. Such an approach, when successful, is quite challenging being usually reliable, robust and characterised by lower costs if compared with those usually associated to commonly applied analytical off- and/or on-line analytical approaches. In this paper such an approach is presented with reference to ore minerals characterization. According to the different phases and stages of ore minerals and products characterization, and starting from the analyses of the detected hyperspectral firms, it is possible to derive useful information about mineral flow stream properties and their physical-chemical attributes. This last aspect can be utilized to define innovative process mineralogy strategies and to implement on-line procedures at processing level. The present study discusses the effects related to the adoption of different hardware configurations, the utilization of different logics to perform the analysis and the selection of different algorithms according to the different characterization, inspection and quality control actions to apply.

  11. Hyperspectral Imagery Super-Resolution by Compressive Sensing Inspired Dictionary Learning and Spatial-Spectral Regularization

    PubMed Central

    Huang, Wei; Xiao, Liang; Liu, Hongyi; Wei, Zhihui

    2015-01-01

    Due to the instrumental and imaging optics limitations, it is difficult to acquire high spatial resolution hyperspectral imagery (HSI). Super-resolution (SR) imagery aims at inferring high quality images of a given scene from degraded versions of the same scene. This paper proposes a novel hyperspectral imagery super-resolution (HSI-SR) method via dictionary learning and spatial-spectral regularization. The main contributions of this paper are twofold. First, inspired by the compressive sensing (CS) framework, for learning the high resolution dictionary, we encourage stronger sparsity on image patches and promote smaller coherence between the learned dictionary and sensing matrix. Thus, a sparsity and incoherence restricted dictionary learning method is proposed to achieve higher efficiency sparse representation. Second, a variational regularization model combing a spatial sparsity regularization term and a new local spectral similarity preserving term is proposed to integrate the spectral and spatial-contextual information of the HSI. Experimental results show that the proposed method can effectively recover spatial information and better preserve spectral information. The high spatial resolution HSI reconstructed by the proposed method outperforms reconstructed results by other well-known methods in terms of both objective measurements and visual evaluation. PMID:25608212

  12. Commodity cluster and hardware-based massively parallel implementations of hyperspectral imaging algorithms

    NASA Astrophysics Data System (ADS)

    Plaza, Antonio; Chang, Chein-I.; Plaza, Javier; Valencia, David

    2006-05-01

    The incorporation of hyperspectral sensors aboard airborne/satellite platforms is currently producing a nearly continual stream of multidimensional image data, and this high data volume has soon introduced new processing challenges. The price paid for the wealth spatial and spectral information available from hyperspectral sensors is the enormous amounts of data that they generate. Several applications exist, however, where having the desired information calculated quickly enough for practical use is highly desirable. High computing performance of algorithm analysis is particularly important in homeland defense and security applications, in which swift decisions often involve detection of (sub-pixel) military targets (including hostile weaponry, camouflage, concealment, and decoys) or chemical/biological agents. In order to speed-up computational performance of hyperspectral imaging algorithms, this paper develops several fast parallel data processing techniques. Techniques include four classes of algorithms: (1) unsupervised classification, (2) spectral unmixing, and (3) automatic target recognition, and (4) onboard data compression. A massively parallel Beowulf cluster (Thunderhead) at NASA's Goddard Space Flight Center in Maryland is used to measure parallel performance of the proposed algorithms. In order to explore the viability of developing onboard, real-time hyperspectral data compression algorithms, a Xilinx Virtex-II field programmable gate array (FPGA) is also used in experiments. Our quantitative and comparative assessment of parallel techniques and strategies may help image analysts in selection of parallel hyperspectral algorithms for specific applications.

  13. A computational hyperspectral imaging technique

    NASA Astrophysics Data System (ADS)

    Habibi, Nasim; Azari, Mohammad; Abolbashari, Mehrdad; Farahi, Faramarz

    2016-03-01

    A novel spectral imaging technique is introduced based on a highly dispersive imaging lens system. The chromatic aberration of the lens system is utilized to spread the spectral content of the object over a focal distance. Two three-dimensional surface reconstruction algorithms, depth from focus and depth from defocus, are applied to images captured by dispersive lens system. Using these algorithms, the spectral imager is able to relate either the location of focused image or the amount of defocus at the imaging detector to the spectral content of the object. A spectral imager with ~5 nm spectral resolution is designed based on this technique. The spectral and spatial resolutions of the introduced technique are independent and can be improved simultaneously. Simulation and experimental results are presented.

  14. Lossless compression for three-dimensional images

    NASA Astrophysics Data System (ADS)

    Tang, Xiaoli; Pearlman, William A.

    2004-01-01

    We investigate and compare the performance of several three-dimensional (3D) embedded wavelet algorithms on lossless 3D image compression. The algorithms are Asymmetric Tree Three-Dimensional Set Partitioning In Hierarchical Trees (AT-3DSPIHT), Three-Dimensional Set Partitioned Embedded bloCK (3D-SPECK), Three-Dimensional Context-Based Embedded Zerotrees of Wavelet coefficients (3D-CB-EZW), and JPEG2000 Part II for multi-component images. Two kinds of images are investigated in our study -- 8-bit CT and MR medical images and 16-bit AVIRIS hyperspectral images. First, the performances by using different size of coding units are compared. It shows that increasing the size of coding unit improves the performance somewhat. Second, the performances by using different integer wavelet transforms are compared for AT-3DSPIHT, 3D-SPECK and 3D-CB-EZW. None of the considered filters always performs the best for all data sets and algorithms. At last, we compare the different lossless compression algorithms by applying integer wavelet transform on the entire image volumes. For 8-bit medical image volumes, AT-3DSPIHT performs the best almost all the time, achieving average of 12% decreases in file size compared with JPEG2000 multi-component, the second performer. For 16-bit hyperspectral images, AT-3DSPIHT always performs the best, yielding average 5.8% and 8.9% decreases in file size compared with 3D-SPECK and JPEG2000 multi-component, respectively. Two 2D compression algorithms, JPEG2000 and UNIX zip, are also included for reference, and all 3D algorithms perform much better than 2D algorithms.

  15. Developing a portable GPU library for hyperspectral image processing

    NASA Astrophysics Data System (ADS)

    Pérez-Irizarry, Gabriel J.; De La Cruz-Sanchez, Francisco; Landrón-Rivera, Brian A.; Santiago, Nayda G.; Velez-Reyes, Miguel

    2012-06-01

    The increasing volume of data produced by hyperspectral image sensors have forced researches and developers to seek out new and more ecient ways of analyzing the data as quick as possible. Medical, scientic, and military applications present performance requirements for tools that perform operations on hyperspectral sensor data. By providing a hyperspectral image analysis library, we aim to accelerate hyperspectral image application development. Development of a cross-platform library, Libdect, with GPU support for hyperspectral image analysis is presented. Coupling library development with ecient hyperspectral algorithms escalates into a signicant time invest- ment in many projects or prototypes. Provided a solution to these issues, developers can implement hyperspectral image analysis applications in less time. Developers will not be focused on implementing target detection code and potential issues related to platform or GPU architecture dierences. Libdect's development team counts with previously implemented detection algorithms. By utilizing proven tools, such as CMake and CTest, to develop Libdect's infrastructure, we were able to develop and test a prototype library that provides target detection code with GPU support on Linux platforms. As a whole, Libdect is an early prototype of an open and documented example of Software Engineering practices and tools. They are put together in an eort to increase developer productivity and encourage new developers into the eld of hyperspectral image application development.

  16. Low-Complexity Lossless Compression of Hyperspectral Imagery via Adaptive Filtering

    NASA Technical Reports Server (NTRS)

    Klimesh, M.

    2005-01-01

    A low-complexity, adaptive predictive technique for lossless compression of hyperspectral data is presented. The technique relies on the sign algorithm from the repertoire of adaptive filtering. The compression effectiveness obtained with the technique is competitive with that of the best of previously described techniques with similar complexity.

  17. Low-Complexity Lossless Compression of Hyperspectral Imagery Via Adaptive Filtering

    NASA Technical Reports Server (NTRS)

    Klimesh, Matthew A.

    2005-01-01

    A low-complexity, adaptive predictive technique for lossless compression of hyperspectral data is presented. The technique relies on the sign algorithm from the repertoire of adaptive filtering. The compression effectiveness obtained with the technique is competitive with that of the best of previously described techniques with similar complexity.

  18. Spectral-Spatial Hyperspectral Image Classification Based on KNN

    NASA Astrophysics Data System (ADS)

    Huang, Kunshan; Li, Shutao; Kang, Xudong; Fang, Leyuan

    2016-12-01

    Fusion of spectral and spatial information is an effective way in improving the accuracy of hyperspectral image classification. In this paper, a novel spectral-spatial hyperspectral image classification method based on K nearest neighbor (KNN) is proposed, which consists of the following steps. First, the support vector machine is adopted to obtain the initial classification probability maps which reflect the probability that each hyperspectral pixel belongs to different classes. Then, the obtained pixel-wise probability maps are refined with the proposed KNN filtering algorithm that is based on matching and averaging nonlocal neighborhoods. The proposed method does not need sophisticated segmentation and optimization strategies while still being able to make full use of the nonlocal principle of real images by using KNN, and thus, providing competitive classification with fast computation. Experiments performed on two real hyperspectral data sets show that the classification results obtained by the proposed method are comparable to several recently proposed hyperspectral image classification methods.

  19. Infrared hyperspectral imaging miniaturized for UAV applications

    NASA Astrophysics Data System (ADS)

    Hinnrichs, Michele; Hinnrichs, Bradford; McCutchen, Earl

    2017-02-01

    Pacific Advanced Technology (PAT) has developed an infrared hyperspectral camera, both MWIR and LWIR, small enough to serve as a payload on a miniature unmanned aerial vehicles. The optical system has been integrated into the cold-shield of the sensor enabling the small size and weight of the sensor. This new and innovative approach to infrared hyperspectral imaging spectrometer uses micro-optics and will be explained in this paper. The micro-optics are made up of an area array of diffractive optical elements where each element is tuned to image a different spectral region on a common focal plane array. The lenslet array is embedded in the cold-shield of the sensor and actuated with a miniature piezo-electric motor. This approach enables rapid infrared spectral imaging with multiple spectral images collected and processed simultaneously each frame of the camera. This paper will present our optical mechanical design approach which results in an infrared hyper-spectral imaging system that is small enough for a payload on a mini-UAV or commercial quadcopter. Also, an example of how this technology can easily be used to quantify a hydrocarbon gas leak's volume and mass flowrates. The diffractive optical elements used in the lenslet array are blazed gratings where each lenslet is tuned for a different spectral bandpass. The lenslets are configured in an area array placed a few millimeters above the focal plane and embedded in the cold-shield to reduce the background signal normally associated with the optics. We have developed various systems using a different number of lenslets in the area array. Depending on the size of the focal plane and the diameter of the lenslet array will determine the spatial resolution. A 2 x 2 lenslet array will image four different spectral images of the scene each frame and when coupled with a 512 x 512 focal plane array will give spatial resolution of 256 x 256 pixel each spectral image. Another system that we developed uses a 4 x 4

  20. Sparse Superpixel Unmixing for Hyperspectral Image Analysis

    NASA Technical Reports Server (NTRS)

    Castano, Rebecca; Thompson, David R.; Gilmore, Martha

    2010-01-01

    Software was developed that automatically detects minerals that are present in each pixel of a hyperspectral image. An algorithm based on sparse spectral unmixing with Bayesian Positive Source Separation is used to produce mineral abundance maps from hyperspectral images. A superpixel segmentation strategy enables efficient unmixing in an interactive session. The algorithm computes statistically likely combinations of constituents based on a set of possible constituent minerals whose abundances are uncertain. A library of source spectra from laboratory experiments or previous remote observations is used. A superpixel segmentation strategy improves analysis time by orders of magnitude, permitting incorporation into an interactive user session (see figure). Mineralogical search strategies can be categorized as supervised or unsupervised. Supervised methods use a detection function, developed on previous data by hand or statistical techniques, to identify one or more specific target signals. Purely unsupervised results are not always physically meaningful, and may ignore subtle or localized mineralogy since they aim to minimize reconstruction error over the entire image. This algorithm offers advantages of both methods, providing meaningful physical interpretations and sensitivity to subtle or unexpected minerals.

  1. Hyperspectral imaging from space: Warfighter-1

    NASA Astrophysics Data System (ADS)

    Cooley, Thomas; Seigel, Gary; Thorsos, Ivan

    1999-01-01

    The Air Force Research Laboratory Integrated Space Technology Demonstrations (ISTD) Program Office has partnered with Orbital Sciences Corporation (OSC) to complement the commercial satellite's high-resolution panchromatic imaging and Multispectral imaging (MSI) systems with a moderate resolution Hyperspectral imaging (HSI) spectrometer camera. The program is an advanced technology demonstration utilizing a commercially based space capability to provide unique functionality in remote sensing technology. This leveraging of commercial industry to enhance the value of the Warfighter-1 program utilizes the precepts of acquisition reform and is a significant departure from the old-school method of contracting for government managed large demonstration satellites with long development times and technology obsolescence concerns. The HSI system will be able to detect targets from the spectral signature measured by the hyperspectral camera. The Warfighter-1 program will also demonstrate the utility of the spectral information to theater military commanders and intelligence analysts by transmitting HSI data directly to a mobile ground station that receives and processes the data. After a brief history of the project origins, this paper will present the details of the Warfighter-1 system and expected results from exploitation of HSI data as well as the benefits realized by this collaboration between the Air Force and commercial industry.

  2. Hyperspectral imaging applied to forensic medicine

    NASA Astrophysics Data System (ADS)

    Malkoff, Donald B.; Oliver, William R.

    2000-03-01

    Remote sensing techniques now include the use of hyperspectral infrared imaging sensors covering the mid-and- long wave regions of the spectrum. They have found use in military surveillance applications due to their capability for detection and classification of a large variety of both naturally occurring and man-made substances. The images they produce reveal the spatial distributions of spectral patterns that reflect differences in material temperature, texture, and composition. A program is proposed for demonstrating proof-of-concept in using a portable sensor of this type for crime scene investigations. It is anticipated to be useful in discovering and documenting the affects of trauma and/or naturally occurring illnesses, as well as detecting blood spills, tire patterns, toxic chemicals, skin injection sites, blunt traumas to the body, fluid accumulations, congenital biochemical defects, and a host of other conditions and diseases. This approach can significantly enhance capabilities for determining the circumstances of death. Potential users include law enforcement organizations (police, FBI, CIA), medical examiners, hospitals/emergency rooms, and medical laboratories. Many of the image analysis algorithms already in place for hyperspectral remote sensing and crime scene investigations can be applied to the interpretation of data obtained in this program.

  3. SWIR hyperspectral imaging detector for surface residues

    NASA Astrophysics Data System (ADS)

    Nelson, Matthew P.; Mangold, Paul; Gomer, Nathaniel; Klueva, Oksana; Treado, Patrick

    2013-05-01

    ChemImage has developed a SWIR Hyperspectral Imaging (HSI) sensor which uses hyperspectral imaging for wide area surveillance and standoff detection of surface residues. Existing detection technologies often require close proximity for sensing or detecting, endangering operators and costly equipment. Furthermore, most of the existing sensors do not support autonomous, real-time, mobile platform based detection of threats. The SWIR HSI sensor provides real-time standoff detection of surface residues. The SWIR HSI sensor provides wide area surveillance and HSI capability enabled by liquid crystal tunable filter technology. Easy-to-use detection software with a simple, intuitive user interface produces automated alarms and real-time display of threat and type. The system has potential to be used for the detection of variety of threats including chemicals and illicit drug substances and allows for easy updates in the field for detection of new hazardous materials. SWIR HSI technology could be used by law enforcement for standoff screening of suspicious locations and vehicles in pursuit of illegal labs or combat engineers to support route-clearance applications- ultimately to save the lives of soldiers and civilians. In this paper, results from a SWIR HSI sensor, which include detection of various materials in bulk form, as well as residue amounts on vehicles, people and other surfaces, will be discussed.

  4. Comparing methods for analysis of biomedical hyperspectral image data

    NASA Astrophysics Data System (ADS)

    Leavesley, Silas J.; Sweat, Brenner; Abbott, Caitlyn; Favreau, Peter F.; Annamdevula, Naga S.; Rich, Thomas C.

    2017-02-01

    Over the past 2 decades, hyperspectral imaging technologies have been adapted to address the need for molecule-specific identification in the biomedical imaging field. Applications have ranged from single-cell microscopy to whole-animal in vivo imaging and from basic research to clinical systems. Enabling this growth has been the availability of faster, more effective hyperspectral filtering technologies and more sensitive detectors. Hence, the potential for growth of biomedical hyperspectral imaging is high, and many hyperspectral imaging options are already commercially available. However, despite the growth in hyperspectral technologies for biomedical imaging, little work has been done to aid users of hyperspectral imaging instruments in selecting appropriate analysis algorithms. Here, we present an approach for comparing the effectiveness of spectral analysis algorithms by combining experimental image data with a theoretical "what if" scenario. This approach allows us to quantify several key outcomes that characterize a hyperspectral imaging study: linearity of sensitivity, positive detection cut-off slope, dynamic range, and false positive events. We present results of using this approach for comparing the effectiveness of several common spectral analysis algorithms for detecting weak fluorescent protein emission in the midst of strong tissue autofluorescence. Results indicate that this approach should be applicable to a very wide range of applications, allowing a quantitative assessment of the effectiveness of the combined biology, hardware, and computational analysis for detecting a specific molecular signature.

  5. Space-time compressive imaging.

    PubMed

    Treeaporn, Vicha; Ashok, Amit; Neifeld, Mark A

    2012-02-01

    Compressive imaging systems typically exploit the spatial correlation of the scene to facilitate a lower dimensional measurement relative to a conventional imaging system. In natural time-varying scenes there is a high degree of temporal correlation that may also be exploited to further reduce the number of measurements. In this work we analyze space-time compressive imaging using Karhunen-Loève (KL) projections for the read-noise-limited measurement case. Based on a comprehensive simulation study, we show that a KL-based space-time compressive imager offers higher compression relative to space-only compressive imaging. For a relative noise strength of 10% and reconstruction error of 10%, we find that space-time compressive imaging with 8×8×16 spatiotemporal blocks yields about 292× compression compared to a conventional imager, while space-only compressive imaging provides only 32× compression. Additionally, under high read-noise conditions, a space-time compressive imaging system yields lower reconstruction error than a conventional imaging system due to the multiplexing advantage. We also discuss three electro-optic space-time compressive imaging architecture classes, including charge-domain processing by a smart focal plane array (FPA). Space-time compressive imaging using a smart FPA provides an alternative method to capture the nonredundant portions of time-varying scenes.

  6. Dental caries imaging using hyperspectral stimulated Raman scattering microscopy

    NASA Astrophysics Data System (ADS)

    Wang, Zi; Zheng, Wei; Jian, Lin; Huang, Zhiwei

    2016-03-01

    We report the development of a polarization-resolved hyperspectral stimulated Raman scattering (SRS) imaging technique based on a picosecond (ps) laser-pumped optical parametric oscillator system for label-free imaging of dental caries. In our imaging system, hyperspectral SRS images (512×512 pixels) in both fingerprint region (800-1800 cm-1) and high-wavenumber region (2800-3600 cm-1) are acquired in minutes by scanning the wavelength of OPO output, which is a thousand times faster than conventional confocal micro Raman imaging. SRS spectra variations from normal enamel to caries obtained from the hyperspectral SRS images show the loss of phosphate and carbonate in the carious region. While polarization-resolved SRS images at 959 cm-1 demonstrate that the caries has higher depolarization ratio. Our results demonstrate that the polarization resolved-hyperspectral SRS imaging technique developed allows for rapid identification of the biochemical and structural changes of dental caries.

  7. Using hyperspectral imaging technology to identify diseased tomato leaves

    NASA Astrophysics Data System (ADS)

    Li, Cuiling; Wang, Xiu; Zhao, Xueguan; Meng, Zhijun; Zou, Wei

    2016-11-01

    In the process of tomato plants growth, due to the effect of plants genetic factors, poor environment factors, or disoperation of parasites, there will generate a series of unusual symptoms on tomato plants from physiology, organization structure and external form, as a result, they cannot grow normally, and further to influence the tomato yield and economic benefits. Hyperspectral image usually has high spectral resolution, not only contains spectral information, but also contains the image information, so this study adopted hyperspectral imaging technology to identify diseased tomato leaves, and developed a simple hyperspectral imaging system, including a halogen lamp light source unit, a hyperspectral image acquisition unit and a data processing unit. Spectrometer detection wavelength ranged from 400nm to 1000nm. After hyperspectral images of tomato leaves being captured, it was needed to calibrate hyperspectral images. This research used spectrum angle matching method and spectral red edge parameters discriminant method respectively to identify diseased tomato leaves. Using spectral red edge parameters discriminant method produced higher recognition accuracy, the accuracy was higher than 90%. Research results have shown that using hyperspectral imaging technology to identify diseased tomato leaves is feasible, and provides the discriminant basis for subsequent disease control of tomato plants.

  8. Research on hyperspectral dynamic scene and image sequence simulation

    NASA Astrophysics Data System (ADS)

    Sun, Dandan; Gao, Jiaobo; Sun, Kefeng; Hu, Yu; Li, Yu; Xie, Junhu; Zhang, Lei

    2016-10-01

    This paper presents a simulation method of hyper-spectral dynamic scene and image sequence for hyper-spectral equipment evaluation and target detection algorithm. Because of high spectral resolution, strong band continuity, anti-interference and other advantages, in recent years, hyper-spectral imaging technology has been rapidly developed and is widely used in many areas such as optoelectronic target detection, military defense and remote sensing systems. Digital imaging simulation, as a crucial part of hardware in loop simulation, can be applied to testing and evaluation hyper-spectral imaging equipment with lower development cost and shorter development period. Meanwhile, visual simulation can produce a lot of original image data under various conditions for hyper-spectral image feature extraction and classification algorithm. Based on radiation physic model and material characteristic parameters this paper proposes a generation method of digital scene. By building multiple sensor models under different bands and different bandwidths, hyper-spectral scenes in visible, MWIR, LWIR band, with spectral resolution 0.01μm, 0.05μm and 0.1μm have been simulated in this paper. The final dynamic scenes have high real-time and realistic, with frequency up to 100 HZ. By means of saving all the scene gray data in the same viewpoint image sequence is obtained. The analysis results show whether in the infrared band or the visible band, the grayscale variations of simulated hyper-spectral images are consistent with the theoretical analysis results.

  9. Research on hyperspectral dynamic scene and image sequence simulation

    NASA Astrophysics Data System (ADS)

    Sun, Dandan; Liu, Fang; Gao, Jiaobo; Sun, Kefeng; Hu, Yu; Li, Yu; Xie, Junhu; Zhang, Lei

    2016-10-01

    This paper presents a simulation method of hyperspectral dynamic scene and image sequence for hyperspectral equipment evaluation and target detection algorithm. Because of high spectral resolution, strong band continuity, anti-interference and other advantages, in recent years, hyperspectral imaging technology has been rapidly developed and is widely used in many areas such as optoelectronic target detection, military defense and remote sensing systems. Digital imaging simulation, as a crucial part of hardware in loop simulation, can be applied to testing and evaluation hyperspectral imaging equipment with lower development cost and shorter development period. Meanwhile, visual simulation can produce a lot of original image data under various conditions for hyperspectral image feature extraction and classification algorithm. Based on radiation physic model and material characteristic parameters this paper proposes a generation method of digital scene. By building multiple sensor models under different bands and different bandwidths, hyperspectral scenes in visible, MWIR, LWIR band, with spectral resolution 0.01μm, 0.05μm and 0.1μm have been simulated in this paper. The final dynamic scenes have high real-time and realistic, with frequency up to 100 HZ. By means of saving all the scene gray data in the same viewpoint image sequence is obtained. The analysis results show whether in the infrared band or the visible band, the grayscale variations of simulated hyperspectral images are consistent with the theoretical analysis results.

  10. Mapping pigment distribution in mud samples through hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Mehrübeoglu, Mehrube; Nicula, Cosmina; Trombley, Christopher; Smith, Shane W.; Smith, Dustin K.; Shanks, Elizabeth S.; Zimba, Paul V.

    2015-09-01

    Mud samples collected from bodies of water reveal information about the distribution of microorganisms in the local sediments. Hyperspectral imaging has been investigated as a technology to identify phototropic organisms living on sediments collected from the Texas Coastal Bend area based on their spectral pigment profiles and spatial arrangement. The top pigment profiles identified through high-performance liquid chromatography (HPLC) have been correlated with spectral signatures extracted from the hyperspectral data of mud using fast Fourier transform (FFT). Spatial distributions have also been investigated using 2D hyperspectral image processing. 2D pigment distribution maps have been created based on the correlation with pigment profiles in the FFT domain. Among the tested pigments, the results show match among four out of five pigment distribution trends between HPLC and hyperspectral data analysis. Differences are attributed mainly to the difference between area and volume of scale between the HPLC analysis and area covered by hyperspectral imaging.

  11. Image capture: simulation of sensor responses from hyperspectral images.

    PubMed

    Vora, P L; Farrell, J E; Tietz, J D; Brainard, D H

    2001-01-01

    This paper describes the design and performance of an image capture simulator. The general model underlying the simulator assumes that the image capture device contains multiple classes of sensors with different spectral sensitivities and that each sensor responds in a known way to irradiance over most of its operating range. The input to the simulator is a set of narrow-band images of the scene taken with a custom-designed hyperspectral camera system. The parameters for the simulator are the number of sensor classes, the sensor spectral sensitivities, the noise statistics and number of quantization levels for each sensor class, the spatial arrangement of the sensors and the exposure duration. The output of the simulator is the raw image data that would have been acquired by the simulated image capture device. To test the simulator, we acquired images of the same scene both with the hyperspectral camera and with a calibrated Kodak DCS-200 digital color camera. We used the simulator to predict the DCS-200 output from the hyperspectral data. The agreement between simulated and acquired images validated the image capture response model and our simulator implementation. We believe the simulator will provide a useful tool for understanding the effect of varying the design parameters of an image capture device.

  12. Recent applications of hyperspectral imaging in microbiology.

    PubMed

    Gowen, Aoife A; Feng, Yaoze; Gaston, Edurne; Valdramidis, Vasilis

    2015-05-01

    Hyperspectral chemical imaging (HSI) is a broad term encompassing spatially resolved spectral data obtained through a variety of modalities (e.g. Raman scattering, Fourier transform infrared microscopy, fluorescence and near-infrared chemical imaging). It goes beyond the capabilities of conventional imaging and spectroscopy by obtaining spatially resolved spectra from objects at spatial resolutions varying from the level of single cells up to macroscopic objects (e.g. foods). In tandem with recent developments in instrumentation and sampling protocols, applications of HSI in microbiology have increased rapidly. This article gives a brief overview of the fundamentals of HSI and a comprehensive review of applications of HSI in microbiology over the past 10 years. Technical challenges and future perspectives for these techniques are also discussed. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. Modular hyperspectral imager enables multiple research applications

    NASA Astrophysics Data System (ADS)

    Hô, Nicolas; Prel, Florent; Moreau, Louis; Lavoie, Hugo; Bouffard, François; Dubé, Denis; Thériault, Jean-Marc; Vallières, Christian; Roy, Claude

    2012-09-01

    The MR-i spectroradiometer can support a wide range of applications from its architecture suited to multiple configurations. Its modular 4-port FTIR spectroradiometer architecture allows the simultaneous use of two different detector modules, direct or differential input(s) and multiple telescopes. In a given configuration, MR-i can combine a MWIR focal plane array and a LWIR focal plane array to provide an extended spectral range from the two imaging sensors. The two detector array modules are imaging the same scene allowing synchronized pixel-to-pixel spectral range combination. In another configuration, MR-i can combine two identical focal plane arrays with different attenuation factors and two interleaved integration times per detector array. This configuration generates four sets of hyperspectral data cubes with different dynamic ranges that can be combined to produce a single hyperspectral cube with unmatched dynamic range. This configuration is particularly well suited for high-speed, high-dynamic range characterization of targets such as aircrafts, flares, and explosions. In a third configuration, named iCATSI, the spectroradiometer is used in differential input configuration to provide efficient optical background subtraction. The iCATSI configuration features an MCT detectors array with spectral cutoff near 14 µm. This extended spectral range and high sensitivity allows the detection and identification of a wide range of chemicals.

  14. Image visualization of hyperspectral spectrum for LWIR

    NASA Astrophysics Data System (ADS)

    Chong, Eugene; Jeong, Young-Su; Lee, Jai-Hoon; Park, Dong Jo; Kim, Ju Hyun

    2015-07-01

    The image visualization of a real-time hyperspectral spectrum in the long-wave infrared (LWIR) range of 900-1450 cm-1 by a color-matching function is addressed. It is well known that the absorption spectra of main toxic industrial chemical (TIC) and chemical warfare agent (CWA) clouds are detected in this spectral region. Furthermore, a significant spectral peak due to various background species and unknown targets are also present. However, those are dismissed as noise, resulting in utilization limit. Herein, we applied a color-matching function that uses the information from hyperspectral data, which is emitted from the materials and surfaces of artificial or natural backgrounds in the LWIR region. This information was used to classify and differentiate the background signals from the targeted substances, and the results were visualized as image data without additional visual equipment. The tristimulus value based visualization information can quickly identify the background species and target in real-time detection in LWIR.

  15. Dried fruits quality assessment by hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Serranti, Silvia; Gargiulo, Aldo; Bonifazi, Giuseppe

    2012-05-01

    Dried fruits products present different market values according to their quality. Such a quality is usually quantified in terms of freshness of the products, as well as presence of contaminants (pieces of shell, husk, and small stones), defects, mould and decays. The combination of these parameters, in terms of relative presence, represent a fundamental set of attributes conditioning dried fruits humans-senses-detectable-attributes (visual appearance, organolectic properties, etc.) and their overall quality in terms of marketable products. Sorting-selection strategies exist but sometimes they fail when a higher degree of detection is required especially if addressed to discriminate between dried fruits of relatively small dimensions and when aiming to perform an "early detection" of pathogen agents responsible of future moulds and decays development. Surface characteristics of dried fruits can be investigated by hyperspectral imaging (HSI). In this paper, specific and "ad hoc" applications addressed to propose quality detection logics, adopting a hyperspectral imaging (HSI) based approach, are described, compared and critically evaluated. Reflectance spectra of selected dried fruits (hazelnuts) of different quality and characterized by the presence of different contaminants and defects have been acquired by a laboratory device equipped with two HSI systems working in two different spectral ranges: visible-near infrared field (400-1000 nm) and near infrared field (1000-1700 nm). The spectra have been processed and results evaluated adopting both a simple and fast wavelength band ratio approach and a more sophisticated classification logic based on principal component (PCA) analysis.

  16. Longwave hyperspectral imaging spectrometer design and implementation

    NASA Astrophysics Data System (ADS)

    Miller, Harold, Jr.; Yokoyama, Karen E.; Rasmussen, Kent; Engler, Tom; Rupert, Jim; Flegal, Bruce; Jarecke, Peter J.

    2003-12-01

    Northrop Grumman Space Technology (NGST), using internal funding, has designed, built and is testing a Long Wave Hyperspectral Imaging Spectrometer (LWHIS) that operates in the 8 to 12.5 micron band. This instrument was designed to be compatible with aircraft platforms so that flight data in this wavelength band can be used for phenomenological analysis. The instrument provides up to 256 contiguous spectral channels with 17 nm of dispersion per pixel (pixels are binned in normal operation to provide 128 spectral channels). The entrance aperture is 3.5 cm and feeds a F2/5 reflective triplet front end. The focal plane is a 256 x 256 array of 40 micron pixels which can be binned to form an 80 micron superpixel. With a fixed frame rate of 60 Hz, the instrument provides a ground sample distance of 1m at 1.1km altitude. This paper describes the physical characteristics of the design and presents the predicted performance based on NGST internal models. Design trades and test data will be presented. A more detailed look at the characterization and calibration of this instrument will be presented in a companion paper "Long Wave Hyperspectral Imaging Spectrometer -- System Characterization and Calibration."

  17. Longwave hyperspectral imaging spectrometer design and implementation

    NASA Astrophysics Data System (ADS)

    Miller, Harold, Jr.; Yokoyama, Karen E.; Rasmussen, Kent; Engler, Tom; Rupert, Jim; Flegal, Bruce; Jarecke, Peter J.

    2004-01-01

    Northrop Grumman Space Technology (NGST), using internal funding, has designed, built and is testing a Long Wave Hyperspectral Imaging Spectrometer (LWHIS) that operates in the 8 to 12.5 micron band. This instrument was designed to be compatible with aircraft platforms so that flight data in this wavelength band can be used for phenomenological analysis. The instrument provides up to 256 contiguous spectral channels with 17 nm of dispersion per pixel (pixels are binned in normal operation to provide 128 spectral channels). The entrance aperture is 3.5 cm and feeds a F2/5 reflective triplet front end. The focal plane is a 256 x 256 array of 40 micron pixels which can be binned to form an 80 micron superpixel. With a fixed frame rate of 60 Hz, the instrument provides a ground sample distance of 1m at 1.1km altitude. This paper describes the physical characteristics of the design and presents the predicted performance based on NGST internal models. Design trades and test data will be presented. A more detailed look at the characterization and calibration of this instrument will be presented in a companion paper "Long Wave Hyperspectral Imaging Spectrometer -- System Characterization and Calibration."

  18. Hyperspectral imaging: future applications in security systems

    NASA Astrophysics Data System (ADS)

    Bürsing, Helge; Gross, Wolfgang

    2017-04-01

    The idea behind hyperspectral imagers (HSI) is to generate an image with hundreds of contiguous narrow channels, the so-called spectral bands. As each material has a specific spectral signature, robust detection and classification of specific materials is now achievable. Spectra can be characterized by narrow features in their signatures that broadband and multispectral cameras cannot resolve. As a result of technical progress, new HSI with higher spatial resolution and better signal-to-noise ratios have been developed. Additionally, it is possible to buy small HSI that weigh less than 1 kg, which opens up new applications in surveillance and monitoring with unmanned aerial systems (UAS). Despite the capabilities of hyperspectral data evaluation, HSI is applied to surprisingly few tasks. This is a result of the sheer amount of recorded data that needs to be analyzed and the complex data pre-processing when the sensors are not used in a controlled environment. Also, extensive research is required to find the most efficient solution for a given task. The goal of this letter is to introduce and compare the different sensor techniques, discuss potential use for applications in civil security and give an outlook of future challenges.

  19. Hyperspectral imaging for melanoma screening

    NASA Astrophysics Data System (ADS)

    Martin, Justin; Krueger, James; Gareau, Daniel

    2014-03-01

    The 5-year survival rate for patients diagnosed with Melanoma, a deadly form of skin cancer, in its latest stages is about 15%, compared to over 90% for early detection and treatment. We present an imaging system and algorithm that can be used to automatically generate a melanoma risk score to aid clinicians in the early identification of this form of skin cancer. Our system images the patient's skin at a series of different wavelengths and then analyzes several key dermoscopic features to generate this risk score. We have found that shorter wavelengths of light are sensitive to information in the superficial areas of the skin while longer wavelengths can be used to gather information at greater depths. This accompanying diagnostic computer algorithm has demonstrated much higher sensitivity and specificity than the currently commercialized system in preliminary trials and has the potential to improve the early detection of melanoma.

  20. Pattern recognition in hyperspectral persistent imaging

    NASA Astrophysics Data System (ADS)

    Rosario, Dalton; Romano, Joao; Borel, Christoph

    2015-05-01

    We give updates on a persistent imaging experiment dataset, being considered for public release in a foreseeable future, and present additional observations analyzing a subset of the dataset. The experiment is a long-term collaborative effort among the Army Research Laboratory, Army Armament RDEC, and Air Force Institute of Technology that focuses on the collection and exploitation of longwave infrared (LWIR) hyperspectral imagery. We emphasize the inherent challenges associated with using remotely sensed LWIR hyperspectral imagery for material recognition, and show that this data type violates key data assumptions conventionally used in the scientific community to develop detection/ID algorithms, i.e., normality, independence, identical distribution. We treat LWIR hyperspectral imagery as Longitudinal Data and aim at proposing a more realistic framework for material recognition as a function of spectral evolution through time, and discuss limitations. The defining characteristic of a longitudinal study is that objects are measured repeatedly through time and, as a result, data are dependent. This is in contrast to cross-sectional studies in which the outcomes of a specific event are observed by randomly sampling from a large population of relevant objects in which data are assumed independent. Researchers in the remote sensing community generally assume the problem of object recognition to be cross-sectional. But through a longitudinal analysis of a fixed site with multiple material types, we quantify and argue that, as data evolve through a full diurnal cycle, pattern recognition problems are longitudinal in nature and that by applying this knowledge may lead to better algorithms.

  1. Hyperspectral Fluorescence and Reflectance Imaging Instrument

    NASA Technical Reports Server (NTRS)

    Ryan, Robert E.; O'Neal, S. Duane; Lanoue, Mark; Russell, Jeffrey

    2008-01-01

    The system is a single hyperspectral imaging instrument that has the unique capability to acquire both fluorescence and reflectance high-spatial-resolution data that is inherently spatially and spectrally registered. Potential uses of this instrument include plant stress monitoring, counterfeit document detection, biomedical imaging, forensic imaging, and general materials identification. Until now, reflectance and fluorescence spectral imaging have been performed by separate instruments. Neither a reflectance spectral image nor a fluorescence spectral image alone yields as much information about a target surface as does a combination of the two modalities. Before this system was developed, to benefit from this combination, analysts needed to perform time-consuming post-processing efforts to co-register the reflective and fluorescence information. With this instrument, the inherent spatial and spectral registration of the reflectance and fluorescence images minimizes the need for this post-processing step. The main challenge for this technology is to detect the fluorescence signal in the presence of a much stronger reflectance signal. To meet this challenge, the instrument modulates artificial light sources from ultraviolet through the visible to the near-infrared part of the spectrum; in this way, both the reflective and fluorescence signals can be measured through differencing processes to optimize fluorescence and reflectance spectra as needed. The main functional components of the instrument are a hyperspectral imager, an illumination system, and an image-plane scanner. The hyperspectral imager is a one-dimensional (line) imaging spectrometer that includes a spectrally dispersive element and a two-dimensional focal plane detector array. The spectral range of the current imaging spectrometer is between 400 to 1,000 nm, and the wavelength resolution is approximately 3 nm. The illumination system consists of narrowband blue, ultraviolet, and other discrete

  2. Hyperspectral image reconstruction for x-ray fluorescence tomography

    SciTech Connect

    Gürsoy, Doǧa; Biçer, Tekin; Lanzirotti, Antonio; Newville, Matthew G.; De Carlo, Francesco

    2015-01-01

    A penalized maximum-likelihood estimation is proposed to perform hyperspectral (spatio-spectral) image reconstruction for X-ray fluorescence tomography. The approach minimizes a Poisson-based negative log-likelihood of the observed photon counts, and uses a penalty term that has the effect of encouraging local continuity of model parameter estimates in both spatial and spectral dimensions simultaneously. The performance of the reconstruction method is demonstrated with experimental data acquired from a seed of arabidopsis thaliana collected at the 13-ID-E microprobe beamline at the Advanced Photon Source. The resulting element distribution estimates with the proposed approach show significantly better reconstruction quality than the conventional analytical inversion approaches, and allows for a high data compression factor which can reduce data acquisition times remarkably. In particular, this technique provides the capability to tomographically reconstruct full energy dispersive spectra without compromising reconstruction artifacts that impact the interpretation of results.

  3. Hyperspectral image reconstruction for x-ray fluorescence tomography

    DOE PAGES

    Gürsoy, Doǧa; Biçer, Tekin; Lanzirotti, Antonio; ...

    2015-01-01

    A penalized maximum-likelihood estimation is proposed to perform hyperspectral (spatio-spectral) image reconstruction for X-ray fluorescence tomography. The approach minimizes a Poisson-based negative log-likelihood of the observed photon counts, and uses a penalty term that has the effect of encouraging local continuity of model parameter estimates in both spatial and spectral dimensions simultaneously. The performance of the reconstruction method is demonstrated with experimental data acquired from a seed of arabidopsis thaliana collected at the 13-ID-E microprobe beamline at the Advanced Photon Source. The resulting element distribution estimates with the proposed approach show significantly better reconstruction quality than the conventional analytical inversionmore » approaches, and allows for a high data compression factor which can reduce data acquisition times remarkably. In particular, this technique provides the capability to tomographically reconstruct full energy dispersive spectra without compromising reconstruction artifacts that impact the interpretation of results.« less

  4. Hyperspectral Image Reconstruction for X-ray Fluorescence Tomography

    SciTech Connect

    Gürsoy, Doǧa; Bicer, Tekin; Lanzirotti, Antonio; Newville, Matthew G.; De Carlo, Francesco

    2015-04-07

    A penalized maximum-likelihood estimation is proposed to perform hyperspectral (spatio-spectral) image reconstruction for X-ray fluorescence tomography. The approach minimizes a Poisson-based negative log-likelihood of the observed photon counts, and uses a penalty term that has the effect of encouraging local continuity of model parameter estimates in both spatial and spectral dimensions simultaneously. The performance of the reconstruction method is demonstrated with experimental data acquired from a seed of arabidopsis thaliana collected at the 13-ID-E microprobe beamline at the Advanced Photon Source. The resulting element distribution estimates with the proposed approach show significantly better reconstruction quality than the conventional analytical inversion approaches, and allows for a high data compression factor which can reduce data acquisition times remarkably. In particular, this technique provides the capability to tomographically reconstruct full energy dispersive spectra without compromising reconstruction artifacts that impact the interpretation of results.

  5. Egg embryo development detection with hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Lawrence, Kurt C.; Smith, Douglas P.; Windham, William R.; Heitschmidt, Gerald W.; Park, Bosoon

    2006-10-01

    In the U. S. egg industry, anywhere from 130 million to over one billion infertile eggs are incubated each year. Some of these infertile eggs explode in the hatching cabinet and can potentially spread molds or bacteria to all the eggs in the cabinet. A method to detect the embryo development of incubated eggs was developed. Twelve brown-shell hatching eggs from two replicates (n=24) were incubated and imaged to identify embryo development. A hyperspectral imaging system was used to collect transmission images from 420 to 840 nm of brown-shell eggs positioned with the air cell vertical and normal to the camera lens. Raw transmission images from about 400 to 900 nm were collected for every egg on days 0, 1, 2, and 3 of incubation. A total of 96 images were collected and eggs were broken out on day 6 to determine fertility. After breakout, all eggs were found to be fertile. Therefore, this paper presents results for egg embryo development, not fertility. The original hyperspectral data and spectral means for each egg were both used to create embryo development models. With the hyperspectral data range reduced to about 500 to 700 nm, a minimum noise fraction transformation was used, along with a Mahalanobis Distance classification model, to predict development. Days 2 and 3 were all correctly classified (100%), while day 0 and day 1 were classified at 95.8% and 91.7%, respectively. Alternatively, the mean spectra from each egg were used to develop a partial least squares regression (PLSR) model. First, a PLSR model was developed with all eggs and all days. The data were multiplicative scatter corrected, spectrally smoothed, and the wavelength range was reduced to 539 - 770 nm. With a one-out cross validation, all eggs for all days were correctly classified (100%). Second, a PLSR model was developed with data from day 0 and day 3, and the model was validated with data from day 1 and 2. For day 1, 22 of 24 eggs were correctly classified (91.7%) and for day 2, all eggs

  6. Histological skin morphology enhancement base on molecular hyperspectral imaging technology.

    PubMed

    Li, Q; Sun, Z; Wang, Y; Liu, H; Guo, F; Zhu, J

    2014-08-01

    Most traditional skin histological analysis methods are based on the light microscopy images, which can only provide limited information and low contrast results for pathology evaluation. Molecular hyperspectral imaging technology can provide both spatial and spectral information of skin sections, which is a new method for histological skin analysis. The molecular hyperspectral imaging system was developed by coupling an acousto-optic tunable filters adapter to microscopy and the molecular hyperspectral images were analyzed by home-written software with image processing algorithms. Then, the histological structures in skin sections were investigated in several locations to evaluate the potential application of the molecular hyperspectral imaging technique to dermatology. Molecular hyperspectral images of skin sections were obtained. Single-band images, false color images, virtual 3D surface view images, and color-coded spectral clustering results were produced to highlight the skin structures for histological evaluation. Unlike traditional histological analysis with light microscopy, the molecular hyperspectral imaging technology can enhance the visualization of skin structures using their spectral signatures and their gray values. This technology has potential for the diagnosis and histopathologic characterization of different kind of skin cells. © 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  7. System and method for progressive band selection for hyperspectral images

    NASA Technical Reports Server (NTRS)

    Fisher, Kevin (Inventor)

    2013-01-01

    Disclosed herein are systems, methods, and non-transitory computer-readable storage media for progressive band selection for hyperspectral images. A system having module configured to control a processor to practice the method calculates a virtual dimensionality of a hyperspectral image having multiple bands to determine a quantity Q of how many bands are needed for a threshold level of information, ranks each band based on a statistical measure, selects Q bands from the multiple bands to generate a subset of bands based on the virtual dimensionality, and generates a reduced image based on the subset of bands. This approach can create reduced datasets of full hyperspectral images tailored for individual applications. The system uses a metric specific to a target application to rank the image bands, and then selects the most useful bands. The number of bands selected can be specified manually or calculated from the hyperspectral image's virtual dimensionality.

  8. High spectral resolution airborne short wave infrared hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Wei, Liqing; Yuan, Liyin; Wang, Yueming; Zhuang, Xiaoqiong

    2016-05-01

    Short Wave InfraRed(SWIR) spectral imager is good at detecting difference between materials and penetrating fog and mist. High spectral resolution SWIR hyperspectral imager plays a key role in developing earth observing technology. Hyperspectral data cube can help band selections that is very important for multispectral imager design. Up to now, the spectral resolution of many SWIR hyperspectral imagers is about 10nm. A high sensitivity airborne SWIR hyperspectral imager with narrower spectral band will be presented. The system consists of TMA telescope, slit, spectrometer with planar blazed grating and high sensitivity MCT FPA. The spectral sampling interval is about 3nm. The IFOV is 0.5mrad. To eliminate the influence of the thermal background, a cold shield is designed in the dewar. The pixel number of spatial dimension is 640. Performance measurement in laboratory and image analysis for flight test will also be presented.

  9. Massively parallel processing of remotely sensed hyperspectral images

    NASA Astrophysics Data System (ADS)

    Plaza, Javier; Plaza, Antonio; Valencia, David; Paz, Abel

    2009-08-01

    In this paper, we develop several parallel techniques for hyperspectral image processing that have been specifically designed to be run on massively parallel systems. The techniques developed cover the three relevant areas of hyperspectral image processing: 1) spectral mixture analysis, a popular approach to characterize mixed pixels in hyperspectral data addressed in this work via efficient implementation of a morphological algorithm for automatic identification of pure spectral signatures or endmembers from the input data; 2) supervised classification of hyperspectral data using multi-layer perceptron neural networks with back-propagation learning; and 3) automatic target detection in the hyperspectral data using orthogonal subspace projection concepts. The scalability of the proposed parallel techniques is investigated using Barcelona Supercomputing Center's MareNostrum facility, one of the most powerful supercomputers in Europe.

  10. Metric Learning for Hyperspectral Image Segmentation

    NASA Technical Reports Server (NTRS)

    Bue, Brian D.; Thompson, David R.; Gilmore, Martha S.; Castano, Rebecca

    2011-01-01

    We present a metric learning approach to improve the performance of unsupervised hyperspectral image segmentation. Unsupervised spatial segmentation can assist both user visualization and automatic recognition of surface features. Analysts can use spatially-continuous segments to decrease noise levels and/or localize feature boundaries. However, existing segmentation methods use tasks-agnostic measures of similarity. Here we learn task-specific similarity measures from training data, improving segment fidelity to classes of interest. Multiclass Linear Discriminate Analysis produces a linear transform that optimally separates a labeled set of training classes. The defines a distance metric that generalized to a new scenes, enabling graph-based segmentation that emphasizes key spectral features. We describe tests based on data from the Compact Reconnaissance Imaging Spectrometer (CRISM) in which learned metrics improve segment homogeneity with respect to mineralogical classes.

  11. Hyperspectral fluorescence imaging system for biomedical diagnostics

    NASA Astrophysics Data System (ADS)

    Martin, Matthew E.; Wabuyele, Musundi B.; Panjehpour, Masoud; Phan, Mary N.; Overholt, Bergein F.; Vo-Dinh, Tuan

    2006-02-01

    An advanced hyper-spectral imaging (HSI) system has been developed for use in medical diagnostics. One such diagnostic, esophageal cancer is diagnosed currently through biopsy and subsequent pathology. The end goal of this research is to develop an optical-based technique to assist or replace biopsy. In this paper, we demonstrate an instrument that has the capability to optically diagnose cancer in laboratory mice. We have developed a real-time HSI system based on state-of-the-art liquid crystal tunable filter (LCTF) technology coupled to an endoscope. This unique HSI technology is being developed to obtain spatially resolved images of the slight differences in luminescent properties of normal versus tumorous tissues. In this report, an in-vivo mouse study is shown. A predictive measure of cancer for the mice studied is developed and shown. It is hoped that the results of this study will lead to advances in the optical diagnosis of esophageal cancer in humans.

  12. Hyperspectral image reconstruction for diffuse optical tomography

    PubMed Central

    Larusson, Fridrik; Fantini, Sergio; Miller, Eric L.

    2011-01-01

    We explore the development and performance of algorithms for hyperspectral diffuse optical tomography (DOT) for which data from hundreds of wavelengths are collected and used to determine the concentration distribution of chromophores in the medium under investigation. An efficient method is detailed for forming the images using iterative algorithms applied to a linearized Born approximation model assuming the scattering coefficient is spatially constant and known. The L-surface framework is employed to select optimal regularization parameters for the inverse problem. We report image reconstructions using 126 wavelengths with estimation error in simulations as low as 0.05 and mean square error of experimental data of 0.18 and 0.29 for ink and dye concentrations, respectively, an improvement over reconstructions using fewer specifically chosen wavelengths. PMID:21483616

  13. 3D optical sectioning with a new hyperspectral confocal fluorescence imaging system.

    SciTech Connect

    Nieman, Linda T.; Sinclair, Michael B.; Davidson, George S.; Van Benthem, Mark Hilary; Haaland, David Michael; Timlin, Jerilyn Ann; Sasaki, Darryl Yoshio; Bachand, George David; Jones, Howland D. T.

    2007-02-01

    A novel hyperspectral fluorescence microscope for high-resolution 3D optical sectioning of cells and other structures has been designed, constructed, and used to investigate a number of different problems. We have significantly extended new multivariate curve resolution (MCR) data analysis methods to deconvolve the hyperspectral image data and to rapidly extract quantitative 3D concentration distribution maps of all emitting species. The imaging system has many advantages over current confocal imaging systems including simultaneous monitoring of numerous highly overlapped fluorophores, immunity to autofluorescence or impurity fluorescence, enhanced sensitivity, and dramatically improved accuracy, reliability, and dynamic range. Efficient data compression in the spectral dimension has allowed personal computers to perform quantitative analysis of hyperspectral images of large size without loss of image quality. We have also developed and tested software to perform analysis of time resolved hyperspectral images using trilinear multivariate analysis methods. The new imaging system is an enabling technology for numerous applications including (1) 3D composition mapping analysis of multicomponent processes occurring during host-pathogen interactions, (2) monitoring microfluidic processes, (3) imaging of molecular motors and (4) understanding photosynthetic processes in wild type and mutant Synechocystis cyanobacteria.

  14. Progressive transmission and compression images

    NASA Technical Reports Server (NTRS)

    Kiely, A. B.

    1996-01-01

    We describe an image data compression strategy featuring progressive transmission. The method exploits subband coding and arithmetic coding for compression. We analyze the Laplacian probability density, which closely approximates the statistics of individual subbands, to determine a strategy for ordering the compressed subband data in a way that improves rate-distortion performance. Results are presented for a test image.

  15. Hyperspectral image super-resolution: a hybrid color mapping approach

    NASA Astrophysics Data System (ADS)

    Zhou, Jin; Kwan, Chiman; Budavari, Bence

    2016-07-01

    NASA has been planning a hyperspectral infrared imager mission which will provide global coverage using a hyperspectral imager with 60-m resolution. In some practical applications, such as special crop monitoring or mineral mapping, 60-m resolution may still be too coarse. There have been many pansharpening algorithms for hyperspectral images by fusing high-resolution (HR) panchromatic or multispectral images with low-resolution (LR) hyperspectral images. We propose an approach to generating HR hyperspectral images by fusing high spatial resolution color images with low spatial resolution hyperspectral images. The idea is called hybrid color mapping (HCM) and involves a mapping between a high spatial resolution color image and a low spatial resolution hyperspectral image. Several variants of the color mapping idea, including global, local, and hybrid, are proposed and investigated. It was found that the local HCM yielded the best performance. Comparison of the local HCM with >10 state-of-the-art algorithms using five performance metrics has been carried out using actual images from the air force and NASA. Although our HCM method does not require a point spread function (PSF), our results are comparable to or better than those methods that do require PSF. More importantly, our performance is better than most if not all methods that do not require PSF. After applying our HCM algorithm, not only the visual performance of the hyperspectral image has been significantly improved, but the target classification performance has also been improved. Another advantage of our technique is that it is very efficient and can be easily parallelized. Hence, our algorithm is very suitable for real-time applications.

  16. A survey of landmine detection using hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Makki, Ihab; Younes, Rafic; Francis, Clovis; Bianchi, Tiziano; Zucchetti, Massimo

    2017-02-01

    Hyperspectral imaging is a trending technique in remote sensing that finds its application in many different areas, such as agriculture, mapping, target detection, food quality monitoring, etc. This technique gives the ability to remotely identify the composition of each pixel of the image. Therefore, it is a natural candidate for the purpose of landmine detection, thanks to its inherent safety and fast response time. In this paper, we will present the results of several studies that employed hyperspectral imaging for the purpose of landmine detection, discussing the different signal processing techniques used in this framework for hyperspectral image processing and target detection. Our purpose is to highlight the progresses attained in the detection of landmines using hyperspectral imaging and to identify possible perspectives for future work, in order to achieve a better detection in real-time operation mode.

  17. Development of image mappers for hyperspectral biomedical imaging applications

    PubMed Central

    Kester, Robert T.; Gao, Liang; Tkaczyk, Tomasz S.

    2010-01-01

    A new design and fabrication method is presented for creating large-format (>100 mirror facets) image mappers for a snapshot hyperspectral biomedical imaging system called an image mapping spectrometer (IMS). To verify this approach a 250 facet image mapper with 25 multiple-tilt angles is designed for a compact IMS that groups the 25 subpupils in a 5 × 5 matrix residing within a single collecting objective's pupil. The image mapper is fabricated by precision diamond raster fly cutting using surface-shaped tools. The individual mirror facets have minimal edge eating, tilt errors of <1 mrad, and an average roughness of 5.4 nm. PMID:20357875

  18. Reflectance Prediction Modelling for Residual-Based Hyperspectral Image Coding

    PubMed Central

    Xiao, Rui; Gao, Junbin; Bossomaier, Terry

    2016-01-01

    A Hyperspectral (HS) image provides observational powers beyond human vision capability but represents more than 100 times the data compared to a traditional image. To transmit and store the huge volume of an HS image, we argue that a fundamental shift is required from the existing “original pixel intensity”-based coding approaches using traditional image coders (e.g., JPEG2000) to the “residual”-based approaches using a video coder for better compression performance. A modified video coder is required to exploit spatial-spectral redundancy using pixel-level reflectance modelling due to the different characteristics of HS images in their spectral and shape domain of panchromatic imagery compared to traditional videos. In this paper a novel coding framework using Reflectance Prediction Modelling (RPM) in the latest video coding standard High Efficiency Video Coding (HEVC) for HS images is proposed. An HS image presents a wealth of data where every pixel is considered a vector for different spectral bands. By quantitative comparison and analysis of pixel vector distribution along spectral bands, we conclude that modelling can predict the distribution and correlation of the pixel vectors for different bands. To exploit distribution of the known pixel vector, we estimate a predicted current spectral band from the previous bands using Gaussian mixture-based modelling. The predicted band is used as the additional reference band together with the immediate previous band when we apply the HEVC. Every spectral band of an HS image is treated like it is an individual frame of a video. In this paper, we compare the proposed method with mainstream encoders. The experimental results are fully justified by three types of HS dataset with different wavelength ranges. The proposed method outperforms the existing mainstream HS encoders in terms of rate-distortion performance of HS image compression. PMID:27695102

  19. Image Compression Devices

    NASA Technical Reports Server (NTRS)

    1994-01-01

    The Rice algorithm is a "lossless" compression algorithm; it takes an image or other data that has been broken down into short strings of digital data, then processes each string mathematically to reduce the amount of memory required to store or transmit them. It is particularly useful in medical, scientific or engineering applications where all data must be preserved. Originally developed at Jet Propulsion Laboratory, the technology is marketed by Advanced Hardware Architectures, a company started by a former employee of the NASA Microelectronics Research Center.

  20. Food quality assessment by NIR hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Whitworth, Martin B.; Millar, Samuel J.; Chau, Astor

    2010-04-01

    Near infrared reflectance (NIR) spectroscopy is well established in the food industry for rapid compositional analysis of bulk samples. NIR hyperspectral imaging provides new opportunities to measure the spatial distribution of components such as moisture and fat, and to identify and measure specific regions of composite samples. An NIR hyperspectral imaging system has been constructed for food research applications, incorporating a SWIR camera with a cooled 14 bit HgCdTe detector and N25E spectrograph (Specim Ltd, Finland). Samples are scanned in a pushbroom mode using a motorised stage. The system has a spectral resolution of 256 pixels covering a range of 970-2500 nm and a spatial resolution of 320 pixels covering a swathe adjustable from 8 to 300 mm. Images are acquired at a rate of up to 100 lines s-1, enabling samples to be scanned within a few seconds. Data are captured using SpectralCube software (Specim) and analysed using ENVI and IDL (ITT Visual Information Solutions). Several food applications are presented. The strength of individual absorbance bands enables the distribution of particular components to be assessed. Examples are shown for detection of added gluten in wheat flour and to study the effect of processing conditions on fat distribution in chips/French fries. More detailed quantitative calibrations have been developed to study evolution of the moisture distribution in baguettes during storage at different humidities, to assess freshness of fish using measurements of whole cod and fillets, and for prediction of beef quality by identification and separate measurement of lean and fat regions.

  1. Hyperspectral imaging for safety inspection of food and agricultural products

    NASA Astrophysics Data System (ADS)

    Lu, Renfu; Chen, Yud-Ren

    1999-01-01

    Development of effective food inspection systems is critical in successful implementation of the hazard analysis and critical control points (HACCP) program. Hyperspectral imaging or imaging spectroscopy, which combines techniques of imaging and spectroscopy to acquire spatial and spectral information simultaneously, has great potential in food quality and safety inspection. This paper reviewed the basic principle and features of hyperspectral imaging and its hardware and software implementation. The potential areas of application for hyperspectral imaging in food quality and safety inspection were identified and its limitations were discussed. A hyperspectral imaging system developed for research in food quality and safety inspection was described. Experiments were performed to acquire hyperspectral images from four classes of poultry carcasses: normal, cadaver, septicemia, and tumor. Noticeable differences in the spectra of the relative reflectance and its second difference in the wavelengths between 430 nm and 900 nm were observed between wholesome and unwholesome carcasses. Differences among the three classes of unwholesome carcasses were also observed from their respective spectra. These results showed that hyperspectral imaging can be an effective tool for safety inspection of poultry carcasses.

  2. Black Beauty's Rainbow: Hyperspectral Imaging of Northwest Africa 7034

    NASA Astrophysics Data System (ADS)

    Cannon, K. M.; Mustard, J. F.; Agee, C. B.; Wilson, J. H.; Greenberger, R. N.

    2014-07-01

    Hyperspectral imaging is used to characterize the first basaltic breccia from Mars, Northwest Africa 7034. Initial results show the spectral character of NWA 7034 is unlike other SNC meteorites and may be more representative of average martian crust.

  3. Unsupervised hyperspectral image analysis using independent component analysis (ICA)

    SciTech Connect

    S. S. Chiang; I. W. Ginsberg

    2000-06-30

    In this paper, an ICA-based approach is proposed for hyperspectral image analysis. It can be viewed as a random version of the commonly used linear spectral mixture analysis, in which the abundance fractions in a linear mixture model are considered to be unknown independent signal sources. It does not require the full rank of the separating matrix or orthogonality as most ICA methods do. More importantly, the learning algorithm is designed based on the independency of the material abundance vector rather than the independency of the separating matrix generally used to constrain the standard ICA. As a result, the designed learning algorithm is able to converge to non-orthogonal independent components. This is particularly useful in hyperspectral image analysis since many materials extracted from a hyperspectral image may have similar spectral signatures and may not be orthogonal. The AVIRIS experiments have demonstrated that the proposed ICA provides an effective unsupervised technique for hyperspectral image classification.

  4. Hyperspectral imaging fluorescence excitation scanning for colon cancer detection

    NASA Astrophysics Data System (ADS)

    Leavesley, Silas J.; Walters, Mikayla; Lopez, Carmen; Baker, Thomas; Favreau, Peter F.; Rich, Thomas C.; Rider, Paul F.; Boudreaux, Carole W.

    2016-10-01

    Optical spectroscopy and hyperspectral imaging have shown the potential to discriminate between cancerous and noncancerous tissue with high sensitivity and specificity. However, to date, these techniques have not been effectively translated to real-time endoscope platforms. Hyperspectral imaging of the fluorescence excitation spectrum represents new technology that may be well suited for endoscopic implementation. However, the feasibility of detecting differences between normal and cancerous mucosa using fluorescence excitation-scanning hyperspectral imaging has not been evaluated. The goal of this study was to evaluate the initial feasibility of using fluorescence excitation-scanning hyperspectral imaging for measuring changes in fluorescence excitation spectrum concurrent with colonic adenocarcinoma using a small pre-pilot-scale sample size. Ex vivo analysis was performed using resected pairs of colorectal adenocarcinoma and normal mucosa. Adenocarcinoma was confirmed by histologic evaluation of hematoxylin and eosin (H&E) permanent sections. Specimens were imaged using a custom hyperspectral imaging fluorescence excitation-scanning microscope system. Results demonstrated consistent spectral differences between normal and cancerous tissues over the fluorescence excitation range of 390 to 450 nm that could be the basis for wavelength-dependent detection of colorectal cancers. Hence, excitation-scanning hyperspectral imaging may offer an alternative approach for discriminating adenocarcinoma from surrounding normal colonic mucosa, but further studies will be required to evaluate the accuracy of this approach using a larger patient cohort.

  5. Infrared hyperspectral imaging sensor for gas detection

    NASA Astrophysics Data System (ADS)

    Hinnrichs, Michele

    2000-11-01

    A small light weight man portable imaging spectrometer has many applications; gas leak detection, flare analysis, threat warning, chemical agent detection, just to name a few. With support from the US Air Force and Navy, Pacific Advanced Technology has developed a small man portable hyperspectral imaging sensor with an embedded DSP processor for real time processing that is capable of remotely imaging various targets such as gas plums, flames and camouflaged targets. Based upon their spectral signature the species and concentration of gases can be determined. This system has been field tested at numerous places including White Mountain, CA, Edwards AFB, and Vandenberg AFB. Recently evaluation of the system for gas detection has been performed. This paper presents these results. The system uses a conventional infrared camera fitted with a diffractive optic that images as well as disperses the incident radiation to form spectral images that are collected in band sequential mode. Because the diffractive optic performs both imaging and spectral filtering, the lens system consists of only a single element that is small, light weight and robust, thus allowing man portability. The number of spectral bands are programmable such that only those bands of interest need to be collected. The system is entirely passive, therefore, easily used in a covert operation. Currently Pacific Advanced Technology is working on the next generation of this camera system that will have both an embedded processor as well as an embedded digital signal processor in a small hand held camera configuration. This will allow the implementation of signal and image processing algorithms for gas detection and identification in real time. This paper presents field test data on gas detection and identification as well as discuss the signal and image processing used to enhance the gas visibility. Flow rates as low as 0.01 cubic feet per minute have been imaged with this system.

  6. Hyperspectral Image Classification using a Self-Organizing Map

    NASA Technical Reports Server (NTRS)

    Martinez, P.; Gualtieri, J. A.; Aguilar, P. L.; Perez, R. M.; Linaje, M.; Preciado, J. C.; Plaza, A.

    2001-01-01

    The use of hyperspectral data to determine the abundance of constituents in a certain portion of the Earth's surface relies on the capability of imaging spectrometers to provide a large amount of information at each pixel of a certain scene. Today, hyperspectral imaging sensors are capable of generating unprecedented volumes of radiometric data. The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), for example, routinely produces image cubes with 224 spectral bands. This undoubtedly opens a wide range of new possibilities, but the analysis of such a massive amount of information is not an easy task. In fact, most of the existing algorithms devoted to analyzing multispectral images are not applicable in the hyperspectral domain, because of the size and high dimensionality of the images. The application of neural networks to perform unsupervised classification of hyperspectral data has been tested by several authors and also by us in some previous work. We have also focused on analyzing the intrinsic capability of neural networks to parallelize the whole hyperspectral unmixing process. The results shown in this work indicate that neural network models are able to find clusters of closely related hyperspectral signatures, and thus can be used as a powerful tool to achieve the desired classification. The present work discusses the possibility of using a Self Organizing neural network to perform unsupervised classification of hyperspectral images. In sections 3 and 4, the topology of the proposed neural network and the training algorithm are respectively described. Section 5 provides the results we have obtained after applying the proposed methodology to real hyperspectral data, described in section 2. Different parameters in the learning stage have been modified in order to obtain a detailed description of their influence on the final results. Finally, in section 6 we provide the conclusions at which we have arrived.

  7. Efficient lossless compression scheme for multispectral images

    NASA Astrophysics Data System (ADS)

    Benazza-Benyahia, Amel; Hamdi, Mohamed; Pesquet, Jean-Christophe

    2001-12-01

    Huge amounts of data are generated thanks to the continuous improvement of remote sensing systems. Archiving this tremendous volume of data is a real challenge which requires lossless compression techniques. Furthermore, progressive coding constitutes a desirable feature for telebrowsing. To this purpose, a compact and pyramidal representation of the input image has to be generated. Separable multiresolution decompositions have already been proposed for multicomponent images allowing each band to be decomposed separately. It seems however more appropriate to exploit also the spectral correlations. For hyperspectral images, the solution is to apply a 3D decomposition according to the spatial and to the spectral dimensions. This approach is not appropriate for multispectral images because of the reduced number of spectral bands. In recent works, we have proposed a nonlinear subband decomposition scheme with perfect reconstruction which exploits efficiently both the spatial and the spectral redundancies contained in multispectral images. In this paper, the problem of coding the coefficients of the resulting subband decomposition is addressed. More precisely, we propose an extension to the vector case of Shapiro's embedded zerotrees of wavelet coefficients (V-EZW) with achieves further saving in the bit stream. Simulations carried out on SPOT images indicate the outperformance of the global compression package we performed.

  8. Practical issues of hyperspectral imaging analysis of solid dosage forms.

    PubMed

    Amigo, José Manuel

    2010-09-01

    Hyperspectral imaging techniques have widely demonstrated their usefulness in different areas of interest in pharmaceutical research during the last decade. In particular, middle infrared, near infrared, and Raman methods have gained special relevance. This rapid increase has been promoted by the capability of hyperspectral techniques to provide robust and reliable chemical and spatial information on the distribution of components in pharmaceutical solid dosage forms. Furthermore, the valuable combination of hyperspectral imaging devices with adequate data processing techniques offers the perfect landscape for developing new methods for scanning and analyzing surfaces. Nevertheless, the instrumentation and subsequent data analysis are not exempt from issues that must be thoughtfully considered. This paper describes and discusses the main advantages and drawbacks of the measurements and data analysis of hyperspectral imaging techniques in the development of solid dosage forms.

  9. Hyperspectral imaging technology for pharmaceutical analysis

    NASA Astrophysics Data System (ADS)

    Hamilton, Sara J.; Lodder, Robert A.

    2002-06-01

    The sensitivity and spatial resolution of hyperspectral imaging instruments are tested in this paper using pharmaceutical applications. The first experiment tested the hypothesis that a near-IR tunable diode-based remote sensing system is capable of monitoring degradation of hard gelatin capsules at a relatively long distance. Spectra from the capsules were used to differentiate among capsules exposed to an atmosphere containing imaging spectrometry of tablets permits the identification and composition of multiple individual tables to be determined simultaneously. A near-IR camera was used to collect thousands of spectra simultaneously from a field of blister-packaged tablets. The number of tablets that a typical near-IR camera can currently analyze simultaneously form a field of blister- packaged tablets. The number of tablets that a typical near- IR camera can currently analyze simultaneously was estimated to be approximately 1300. The bootstrap error-adjusted single-sample technique chemometric-imaging algorithm was used to draw probability-density contour plots that revealed tablet composition. The single-capsule analysis provides an indication of how far apart the sample and instrumentation can be and still maintain adequate S/N, while the multiple- sample imaging experiment gives an indication of how many samples can be analyzed simultaneously while maintaining an adequate S/N and pixel coverage on each sample.

  10. A High Performance Image Data Compression Technique for Space Applications

    NASA Technical Reports Server (NTRS)

    Yeh, Pen-Shu; Venbrux, Jack

    2003-01-01

    A highly performing image data compression technique is currently being developed for space science applications under the requirement of high-speed and pushbroom scanning. The technique is also applicable to frame based imaging data. The algorithm combines a two-dimensional transform with a bitplane encoding; this results in an embedded bit string with exact desirable compression rate specified by the user. The compression scheme performs well on a suite of test images acquired from spacecraft instruments. It can also be applied to three-dimensional data cube resulting from hyper-spectral imaging instrument. Flight qualifiable hardware implementations are in development. The implementation is being designed to compress data in excess of 20 Msampledsec and support quantization from 2 to 16 bits. This paper presents the algorithm, its applications and status of development.

  11. Compressive sensing in medical imaging

    PubMed Central

    Graff, Christian G.; Sidky, Emil Y.

    2015-01-01

    The promise of compressive sensing, exploitation of compressibility to achieve high quality image reconstructions with less data, has attracted a great deal of attention in the medical imaging community. At the Compressed Sensing Incubator meeting held in April 2014 at OSA Headquarters in Washington, DC, presentations were given summarizing some of the research efforts ongoing in compressive sensing for x-ray computed tomography and magnetic resonance imaging systems. This article provides an expanded version of these presentations. Sparsity-exploiting reconstruction algorithms that have gained popularity in the medical imaging community are studied, and examples of clinical applications that could benefit from compressive sensing ideas are provided. The current and potential future impact of compressive sensing on the medical imaging field is discussed. PMID:25968400

  12. Compressive sensing in medical imaging.

    PubMed

    Graff, Christian G; Sidky, Emil Y

    2015-03-10

    The promise of compressive sensing, exploitation of compressibility to achieve high quality image reconstructions with less data, has attracted a great deal of attention in the medical imaging community. At the Compressed Sensing Incubator meeting held in April 2014 at OSA Headquarters in Washington, DC, presentations were given summarizing some of the research efforts ongoing in compressive sensing for x-ray computed tomography and magnetic resonance imaging systems. This article provides an expanded version of these presentations. Sparsity-exploiting reconstruction algorithms that have gained popularity in the medical imaging community are studied, and examples of clinical applications that could benefit from compressive sensing ideas are provided. The current and potential future impact of compressive sensing on the medical imaging field is discussed.

  13. Miniaturization of a VNIR hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Warren, Christopher P.; Friend, Michael; Velasco, Arleen; Hinrichs, John; Carleton, Charles; Duncan, Michael; Neumann, Jonathan

    2006-08-01

    A new approach for the design and fabrication of a miniaturized Hyperspectral imager is described. A unique and compact instrument has been developed by taking advantage of light propagation within bonded solid blocks of fused silica. The resulting microHSI is a VNIR hyperspectral sensor capable of operating in the 400-1000 nm wavelength range developed, patented, and built by NovaSol. The microHSI spectrograph weighs 12.4 oz from slit input to camera output. The microHSI can accommodate either custom foreoptics or C-mount input lenses to adapt to a wide range of fields-of-view (FOV). The prototype microHSI uses a telecentric F2.8 foreoptic, with 36 mm focal length, to cover a 15 degree FOV. It can resolve 960 spatial pixels, resulting in a 280 μrad IFOV for this particular foreoptics implementation. With a 1 nm/unbinned pixel dispersion, the spectrometer spectral resolution is 3.5 nm. Results of field and laboratory testing of the prototype microHSI are presented and show that the sensor consistently meets technical performance predictions. The prototype microHSI employs a holographic diffraction grating embedded within the optical blocks resulting in a 19% diffraction efficiency. Future units are anticipated to incorporate a blazed grating for improved throughput and SNR. The microHSI concept can be extended to operation over other wavelength regions. Designs are nearing completion for a SWIR version of the device, and a miniaturized LWIR microHSI sensor is currently at the conceptual design stage.

  14. Image quality (IQ) guided multispectral image compression

    NASA Astrophysics Data System (ADS)

    Zheng, Yufeng; Chen, Genshe; Wang, Zhonghai; Blasch, Erik

    2016-05-01

    Image compression is necessary for data transportation, which saves both transferring time and storage space. In this paper, we focus on our discussion on lossy compression. There are many standard image formats and corresponding compression algorithms, for examples, JPEG (DCT -- discrete cosine transform), JPEG 2000 (DWT -- discrete wavelet transform), BPG (better portable graphics) and TIFF (LZW -- Lempel-Ziv-Welch). The image quality (IQ) of decompressed image will be measured by numerical metrics such as root mean square error (RMSE), peak signal-to-noise ratio (PSNR), and structural Similarity (SSIM) Index. Given an image and a specified IQ, we will investigate how to select a compression method and its parameters to achieve an expected compression. Our scenario consists of 3 steps. The first step is to compress a set of interested images by varying parameters and compute their IQs for each compression method. The second step is to create several regression models per compression method after analyzing the IQ-measurement versus compression-parameter from a number of compressed images. The third step is to compress the given image with the specified IQ using the selected compression method (JPEG, JPEG2000, BPG, or TIFF) according to the regressed models. The IQ may be specified by a compression ratio (e.g., 100), then we will select the compression method of the highest IQ (SSIM, or PSNR). Or the IQ may be specified by a IQ metric (e.g., SSIM = 0.8, or PSNR = 50), then we will select the compression method of the highest compression ratio. Our experiments tested on thermal (long-wave infrared) images (in gray scales) showed very promising results.

  15. Improved Scanners for Microscopic Hyperspectral Imaging

    NASA Technical Reports Server (NTRS)

    Mao, Chengye

    2009-01-01

    Improved scanners to be incorporated into hyperspectral microscope-based imaging systems have been invented. Heretofore, in microscopic imaging, including spectral imaging, it has been customary to either move the specimen relative to the optical assembly that includes the microscope or else move the entire assembly relative to the specimen. It becomes extremely difficult to control such scanning when submicron translation increments are required, because the high magnification of the microscope enlarges all movements in the specimen image on the focal plane. To overcome this difficulty, in a system based on this invention, no attempt would be made to move either the specimen or the optical assembly. Instead, an objective lens would be moved within the assembly so as to cause translation of the image at the focal plane: the effect would be equivalent to scanning in the focal plane. The upper part of the figure depicts a generic proposed microscope-based hyperspectral imaging system incorporating the invention. The optical assembly of this system would include an objective lens (normally, a microscope objective lens) and a charge-coupled-device (CCD) camera. The objective lens would be mounted on a servomotor-driven translation stage, which would be capable of moving the lens in precisely controlled increments, relative to the camera, parallel to the focal-plane scan axis. The output of the CCD camera would be digitized and fed to a frame grabber in a computer. The computer would store the frame-grabber output for subsequent viewing and/or processing of images. The computer would contain a position-control interface board, through which it would control the servomotor. There are several versions of the invention. An essential feature common to all versions is that the stationary optical subassembly containing the camera would also contain a spatial window, at the focal plane of the objective lens, that would pass only a selected portion of the image. In one version

  16. Camouflage target reconnaissance based on hyperspectral imaging technology

    NASA Astrophysics Data System (ADS)

    Hua, Wenshen; Guo, Tong; Liu, Xun

    2015-08-01

    Efficient camouflaged target reconnaissance technology makes great influence on modern warfare. Hyperspectral images can provide large spectral range and high spectral resolution, which are invaluable in discriminating between camouflaged targets and backgrounds. Hyperspectral target detection and classification technology are utilized to achieve single class and multi-class camouflaged targets reconnaissance respectively. Constrained energy minimization (CEM), a widely used algorithm in hyperspectral target detection, is employed to achieve one class camouflage target reconnaissance. Then, support vector machine (SVM), a classification method, is proposed to achieve multi-class camouflage target reconnaissance. Experiments have been conducted to demonstrate the efficiency of the proposed method.

  17. Hyperspectral range imaging for transportation systems evaluation

    NASA Astrophysics Data System (ADS)

    Bridgelall, Raj; Rafert, J. B.; Atwood, Don; Tolliver, Denver D.

    2016-04-01

    Transportation agencies expend significant resources to inspect critical infrastructure such as roadways, railways, and pipelines. Regular inspections identify important defects and generate data to forecast maintenance needs. However, cost and practical limitations prevent the scaling of current inspection methods beyond relatively small portions of the network. Consequently, existing approaches fail to discover many high-risk defect formations. Remote sensing techniques offer the potential for more rapid and extensive non-destructive evaluations of the multimodal transportation infrastructure. However, optical occlusions and limitations in the spatial resolution of typical airborne and space-borne platforms limit their applicability. This research proposes hyperspectral image classification to isolate transportation infrastructure targets for high-resolution photogrammetric analysis. A plenoptic swarm of unmanned aircraft systems will capture images with centimeter-scale spatial resolution, large swaths, and polarization diversity. The light field solution will incorporate structure-from-motion techniques to reconstruct three-dimensional details of the isolated targets from sequences of two-dimensional images. A comparative analysis of existing low-power wireless communications standards suggests an application dependent tradeoff in selecting the best-suited link to coordinate swarming operations. This study further produced a taxonomy of specific roadway and railway defects, distress symptoms, and other anomalies that the proposed plenoptic swarm sensing system would identify and characterize to estimate risk levels.

  18. Advanced Airborne Hyperspectral Imaging System (AAHIS)

    NASA Astrophysics Data System (ADS)

    Topping, Miles Q.; Pfeiffer, Joel E.; Sparks, Andrew W.; Jim, Kevin T. C.; Yoon, Dugan

    2002-11-01

    The design, operation, and performance of the fourth generation of Science and Technology International's Advanced Airborne Hyperspectral Imaging Sensors (AAHIS) are described. These imaging spectrometers have a variable bandwidth ranging from 390-840 nm. A three-axis image stabilization provides spatially and spectrally coherent imagery by damping most of the airborne platform's random motion. A wide 40-degree field of view coupled with sub-pixel detection allows for a large area coverage rate. A software controlled variable aperture, spectral shaping filters, and high quantum efficiency, back-illuminated CCD's contribute to the excellent sensitivity of the sensors. AAHIS sensors have been operated on a variety of fixed and rotary wing platforms, achieving ground-sampling distances ranging from 6.5 cm to 2 m. While these sensors have been primarily designed for use over littoral zones, they are able to operate over both land and water. AAHIS has been used for detecting and locating submarines, mines, tanks, divers, camouflage and disturbed earth. Civilian applications include search and rescue on land and at sea, agricultural analysis, environmental time-series, coral reef assessment, effluent plume detection, coastal mapping, damage assessment, and seasonal whale population monitoring

  19. Infrared hyperspectral imaging polarimeter using birefringent prisms.

    PubMed

    Craven-Jones, Julia; Kudenov, Michael W; Stapelbroek, Maryn G; Dereniak, Eustace L

    2011-03-10

    A compact short-wavelength and middle-wavelength infrared hyperspectral imaging polarimeter (IHIP) is introduced. The sensor includes a pair of sapphire Wollaston prisms and several high-order retarders to form an imaging Fourier transform spectropolarimeter. The Wollaston prisms serve as a birefringent interferometer with reduced sensitivity to vibration versus an unequal path interferometer, such as a Michelson. Polarimetric data are acquired through the use of channeled spectropolarimetry to modulate the spectrum with the Stokes parameter information. The collected interferogram is Fourier filtered and reconstructed to recover the spatially and spectrally varying Stokes vector data across the image. The IHIP operates over a ±5° field of view and implements a dual-scan false signature reduction technique to suppress polarimetric aliasing artifacts. In this paper, the optical layout and operation of the IHIP sensor are presented in addition to the radiometric, spectral, and polarimetric calibration techniques used with the system. Spectral and spectropolarimetric results from the laboratory and outdoor tests with the instrument are also presented.

  20. A hyperspectral vessel image registration method for blood oxygenation mapping.

    PubMed

    Wang, Qian; Li, Qingli; Zhou, Mei; Sun, Zhen; Liu, Hongying; Wang, Yiting

    2017-01-01

    Blood oxygenation mapping by the means of optical oximetry is of significant importance in clinical trials. This paper uses hyperspectral imaging technology to obtain in vivo images for blood oxygenation detection. The experiment involves dorsal skin fold window chamber preparation which was built on adult (8-10 weeks of age) female BALB/c nu/nu mice and in vivo image acquisition which was performed by hyperspectral imaging system. To get the accurate spatial and spectral information of targets, an automatic registration scheme is proposed. An adaptive feature detection method which combines the local threshold method and the level-set filter is presented to extract target vessels. A reliable feature matching algorithm with the correlative information inherent in hyperspectral images is used to kick out the outliers. Then, the registration images are used for blood oxygenation mapping. Registration evaluation results show that most of the false matches are removed and the smooth and concentrated spectra are obtained. This intensity invariant feature detection with outliers-removing feature matching proves to be effective in hyperspectral vessel image registration. Therefore, in vivo hyperspectral imaging system by the assistance of the proposed registration scheme provides a technique for blood oxygenation research.

  1. Meat quality evaluation by hyperspectral imaging technique: an overview.

    PubMed

    Elmasry, Gamal; Barbin, Douglas F; Sun, Da-Wen; Allen, Paul

    2012-01-01

    During the last two decades, a number of methods have been developed to objectively measure meat quality attributes. Hyperspectral imaging technique as one of these methods has been regarded as a smart and promising analytical tool for analyses conducted in research and industries. Recently there has been a renewed interest in using hyperspectral imaging in quality evaluation of different food products. The main inducement for developing the hyperspectral imaging system is to integrate both spectroscopy and imaging techniques in one system to make direct identification of different components and their spatial distribution in the tested product. By combining spatial and spectral details together, hyperspectral imaging has proved to be a promising technology for objective meat quality evaluation. The literature presented in this paper clearly reveals that hyperspectral imaging approaches have a huge potential for gaining rapid information about the chemical structure and related physical properties of all types of meat. In addition to its ability for effectively quantifying and characterizing quality attributes of some important visual features of meat such as color, quality grade, marbling, maturity, and texture, it is able to measure multiple chemical constituents simultaneously without monotonous sample preparation. Although this technology has not yet been sufficiently exploited in meat process and quality assessment, its potential is promising. Developing a quality evaluation system based on hyperspectral imaging technology to assess the meat quality parameters and to ensure its authentication would bring economical benefits to the meat industry by increasing consumer confidence in the quality of the meat products. This paper provides a detailed overview of the recently developed approaches and latest research efforts exerted in hyperspectral imaging technology developed for evaluating the quality of different meat products and the possibility of its widespread

  2. Simulated altitude exposure assessment by hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Calin, Mihaela Antonina; Macovei, Adrian; Miclos, Sorin; Parasca, Sorin Viorel; Savastru, Roxana; Hristea, Razvan

    2017-05-01

    Testing the human body's reaction to hypoxia (including the one generated by high altitude) is important in aeronautic medicine. This paper presents a method of monitoring blood oxygenation during experimental hypoxia using hyperspectral imaging (HSI) and a spectral unmixing model based on a modified Beer-Lambert law. A total of 20 healthy volunteers (males) aged 25 to 60 years were included in this study. A line-scan HSI system was used to acquire images of the faces of the subjects. The method generated oxyhemoglobin and deoxyhemoglobin distribution maps from the foreheads of the subjects at 5 and 10 min of hypoxia and after recovery in a high oxygen breathing mixture. The method also generated oxygen saturation maps that were validated using pulse oximetry. An interesting pattern of desaturation on the forehead was discovered during the study, showing one of the advantages of using HSI for skin oxygenation monitoring in hypoxic conditions. This could bring new insight into the physiological response to high altitude and may become a step forward in air crew testing.

  3. Visible-Infrared Hyperspectral Image Projector

    NASA Technical Reports Server (NTRS)

    Bolcar, Matthew

    2013-01-01

    The VisIR HIP generates spatially-spectrally complex scenes. The generated scenes simulate real-world targets viewed by various remote sensing instruments. The VisIR HIP consists of two subsystems: a spectral engine and a spatial engine. The spectral engine generates spectrally complex uniform illumination that spans the wavelength range between 380 nm and 1,600 nm. The spatial engine generates two-dimensional gray-scale scenes. When combined, the two engines are capable of producing two-dimensional scenes with a unique spectrum at each pixel. The VisIR HIP can be used to calibrate any spectrally sensitive remote-sensing instrument. Tests were conducted on the Wide-field Imaging Interferometer Testbed at NASA s Goddard Space Flight Center. The device is a variation of the calibrated hyperspectral image projector developed by the National Institute of Standards and Technology in Gaithersburg, MD. It uses Gooch & Housego Visible and Infrared OL490 Agile Light Sources to generate arbitrary spectra. The two light sources are coupled to a digital light processing (DLP(TradeMark)) digital mirror device (DMD) that serves as the spatial engine. Scenes are displayed on the DMD synchronously with desired spectrum. Scene/spectrum combinations are displayed in rapid succession, over time intervals that are short compared to the integration time of the system under test.

  4. Simulated altitude exposure assessment by hyperspectral imaging.

    PubMed

    Calin, Mihaela Antonina; Macovei, Adrian; Miclos, Sorin; Parasca, Sorin Viorel; Savastru, Roxana; Hristea, Razvan

    2017-05-01

    Testing the human body’s reaction to hypoxia (including the one generated by high altitude) is important in aeronautic medicine. This paper presents a method of monitoring blood oxygenation during experimental hypoxia using hyperspectral imaging (HSI) and a spectral unmixing model based on a modified Beer–Lambert law. A total of 20 healthy volunteers (males) aged 25 to 60 years were included in this study. A line-scan HSI system was used to acquire images of the faces of the subjects. The method generated oxyhemoglobin and deoxyhemoglobin distribution maps from the foreheads of the subjects at 5 and 10 min of hypoxia and after recovery in a high oxygen breathing mixture. The method also generated oxygen saturation maps that were validated using pulse oximetry. An interesting pattern of desaturation on the forehead was discovered during the study, showing one of the advantages of using HSI for skin oxygenation monitoring in hypoxic conditions. This could bring new insight into the physiological response to high altitude and may become a step forward in air crew testing.

  5. Raman Hyperspectral Imaging of Microfossils: Potential Pitfalls

    PubMed Central

    Olcott Marshall, Alison

    2013-01-01

    Abstract Initially, Raman spectroscopy was a specialized technique used by vibrational spectroscopists; however, due to rapid advancements in instrumentation and imaging techniques over the last few decades, Raman spectrometers are widely available at many institutions, allowing Raman spectroscopy to become a widespread analytical tool in mineralogy and other geological sciences. Hyperspectral imaging, in particular, has become popular due to the fact that Raman spectroscopy can quickly delineate crystallographic and compositional differences in 2-D and 3-D at the micron scale. Although this rapid growth of applications to the Earth sciences has provided great insight across the geological sciences, the ease of application as the instruments become increasingly automated combined with nonspecialists using this techique has resulted in the propagation of errors and misunderstandings throughout the field. For example, the literature now includes misassigned vibration modes, inappropriate spectral processing techniques, confocal depth of laser penetration incorrectly estimated into opaque crystalline solids, and a misconstrued understanding of the anisotropic nature of sp2 carbons. Key Words: Raman spectroscopy—Raman imaging—Confocal Raman spectroscopy—Disordered sp2 carbons—Hematite—Microfossils. Astrobiology 13, 920–931. PMID:24088070

  6. Geographical classification of apple based on hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Guo, Zhiming; Huang, Wenqian; Chen, Liping; Zhao, Chunjiang; Peng, Yankun

    2013-05-01

    Attribute of apple according to geographical origin is often recognized and appreciated by the consumers. It is usually an important factor to determine the price of a commercial product. Hyperspectral imaging technology and supervised pattern recognition was attempted to discriminate apple according to geographical origins in this work. Hyperspectral images of 207 Fuji apple samples were collected by hyperspectral camera (400-1000nm). Principal component analysis (PCA) was performed on hyperspectral imaging data to determine main efficient wavelength images, and then characteristic variables were extracted by texture analysis based on gray level co-occurrence matrix (GLCM) from dominant waveband image. All characteristic variables were obtained by fusing the data of images in efficient spectra. Support vector machine (SVM) was used to construct the classification model, and showed excellent performance in classification results. The total classification rate had the high classify accuracy of 92.75% in the training set and 89.86% in the prediction sets, respectively. The overall results demonstrated that the hyperspectral imaging technique coupled with SVM classifier can be efficiently utilized to discriminate Fuji apple according to geographical origins.

  7. Band-Moment Compression of AVIRIS Hyperspectral Data and its Use in the Detection of Vegetation Stress

    NASA Technical Reports Server (NTRS)

    Estep, L.; Davis, B.

    2001-01-01

    A remote sensing campaign was conducted over a U.S. Department of Agriculture test farm at Shelton, Nebraska. An experimental field was set off in plots that were differentially treated with anhydrous ammonia. Four replicates of 0-kg/ha to 200-kg/ha plots, in 50-kg/ha increments, were set out in a random block design. Low-altitude (GSD of 3 m) Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) hyperspectral data were collected over the site in 224 bands. Simultaneously, ground data were collected to support the airborne imagery. In an effort to reduce data load while maintaining or enhancing algorithm performance for vegetation stress detection, band-moment compression and analysis was applied to the AVIRIS image cube. The results indicated that band-moment techniques compress the AVIRIS dataset significantly while retaining the capability of detecting environmentally induced vegetation stress.

  8. Airborne Demonstration of FPGA Implementation of Fast Lossless Hyperspectral Data Compression System

    NASA Technical Reports Server (NTRS)

    Keymeulen, D.; Aranki, N.; Bakhshi, A.; Luong, H.; Sartures, C.; Dolman, D.

    2014-01-01

    Efficient on-board lossless hyperspectral data compression reduces data volume in order to meet NASA and DoD limited downlink capabilities. The technique also improves signature extraction, object recognition and feature classification capabilities by providing exact reconstructed data on constrained downlink resources. At JPL a novel, adaptive and predictive technique for lossless compression of hyperspectral data was recently developed. This technique uses an adaptive filtering method and achieves a combination of low complexity and compression effectiveness that far exceeds state-of-the-art techniques currently in use. The JPL-developed 'Fast Lossless' algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. It is of low computational complexity and thus well-suited for implementation in hardware.

  9. Airborne Demonstration of FPGA Implementation of Fast Lossless Hyperspectral Data Compression System

    NASA Technical Reports Server (NTRS)

    Keymeulen, D.; Aranki, N.; Bakhshi, A.; Luong, H.; Sartures, C.; Dolman, D.

    2014-01-01

    Efficient on-board lossless hyperspectral data compression reduces data volume in order to meet NASA and DoD limited downlink capabilities. The technique also improves signature extraction, object recognition and feature classification capabilities by providing exact reconstructed data on constrained downlink resources. At JPL a novel, adaptive and predictive technique for lossless compression of hyperspectral data was recently developed. This technique uses an adaptive filtering method and achieves a combination of low complexity and compression effectiveness that far exceeds state-of-the-art techniques currently in use. The JPL-developed 'Fast Lossless' algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. It is of low computational complexity and thus well-suited for implementation in hardware.

  10. Hyperspectral imaging in the infrared using LIFTIRS. Revision 1

    SciTech Connect

    Bennett, C.L.; Carter, M.R.; Fields, D.J.

    1995-10-01

    In this article the ideal performance for various possible designs for imaging spectrometers is discussed. Recent characterization measurements made with LIFTIRS, the Livermore Imaging Fourier Transform InfraRed Spectrometer are also presented. Hyperspectral imagers, characterized by having a large number of spectral channels, enable definitive identification and quantitative measurement of the composition of objects in the field of view. Infrared hyperspectral imagers are particularly useful for remote chemical analysis, since almost all molecules have characteristic rotation-vibration spectra in the infrared, and a broad portion of the so-called fingerprint region of the infrared spectrum lies where the atmosphere is relatively transparent, between 8 and 13 {micro}m.

  11. Standoff midwave infrared hyperspectral imaging of ship plumes

    NASA Astrophysics Data System (ADS)

    Gagnon, Marc-André; Gagnon, Jean-Philippe; Tremblay, Pierre; Savary, Simon; Farley, Vincent; Guyot, Éric; Lagueux, Philippe; Chamberland, Martin; Marcotte, Frédérick

    2016-05-01

    Characterization of ship plumes is very challenging due to the great variety of ships, fuel, and fuel grades, as well as the extent of a gas plume. In this work, imaging of ship plumes from an operating ferry boat was carried out using standoff midwave (3-5 μm) infrared hyperspectral imaging. Quantitative chemical imaging of combustion gases was achieved by fitting a radiative transfer model. Combustion efficiency maps and mass flow rates are presented for carbon monoxide (CO) and carbon dioxide (CO2). The results illustrate how valuable information about the combustion process of a ship engine can be successfully obtained using passive hyperspectral remote sensing imaging.

  12. Standoff midwave infrared hyperspectral imaging of ship plumes

    NASA Astrophysics Data System (ADS)

    Gagnon, Marc-André; Gagnon, Jean-Philippe; Tremblay, Pierre; Savary, Simon; Farley, Vincent; Guyot, Éric; Lagueux, Philippe; Chamberland, Martin

    2016-10-01

    Characterization of ship plumes is very challenging due to the great variety of ships, fuel, and fuel grades, as well as the extent of a gas plume. In this work, imaging of ship plumes from an operating ferry boat was carried out using standoff midwave (3-5 μm) infrared hyperspectral imaging. Quantitative chemical imaging of combustion gases was achieved by fitting a radiative transfer model. Combustion efficiency maps and mass flow rates are presented for carbon monoxide (CO) and carbon dioxide (CO2). The results illustrate how valuable information about the combustion process of a ship engine can be successfully obtained using passive hyperspectral remote sensing imaging.

  13. Classification of Korla fragrant pears using NIR hyperspectral imaging analysis

    NASA Astrophysics Data System (ADS)

    Rao, Xiuqin; Yang, Chun-Chieh; Ying, Yibin; Kim, Moon S.; Chao, Kuanglin

    2012-05-01

    Korla fragrant pears are small oval pears characterized by light green skin, crisp texture, and a pleasant perfume for which they are named. Anatomically, the calyx of a fragrant pear may be either persistent or deciduous; the deciduouscalyx fruits are considered more desirable due to taste and texture attributes. Chinese packaging standards require that packed cases of fragrant pears contain 5% or less of the persistent-calyx type. Near-infrared hyperspectral imaging was investigated as a potential means for automated sorting of pears according to calyx type. Hyperspectral images spanning the 992-1681 nm region were acquired using an EMCCD-based laboratory line-scan imaging system. Analysis of the hyperspectral images was performed to select wavebands useful for identifying persistent-calyx fruits and for identifying deciduous-calyx fruits. Based on the selected wavebands, an image-processing algorithm was developed that targets automated classification of Korla fragrant pears into the two categories for packaging purposes.

  14. On the usefulness of hyperspectral imaging for face recognition

    NASA Astrophysics Data System (ADS)

    Bianco, Simone

    2016-11-01

    Hyperspectral cameras provide additional information in terms of multiple sampling of the visible spectrum, holding information that could be potentially useful for biometric applications. This paper investigates whether the performance of hyperspectral face recognition algorithms can be improved by considering single and multiple one-dimensional (1-D) projections of the whole spectral data along the spectral dimension. Three different projections are investigated and found by optimization: single-spectral band selection, nonnegative spectral band combination, and unbounded spectral band combination. Since 1-D projections can be performed directly on the imaging device with color filters, projections are also restricted to be physically plausible. The experiments are performed on a standard hyperspectral dataset and the obtained results outperform eight existing hyperspectral face recognition algorithms.

  15. Parallel image compression

    NASA Technical Reports Server (NTRS)

    Reif, John H.

    1987-01-01

    A parallel compression algorithm for the 16,384 processor MPP machine was developed. The serial version of the algorithm can be viewed as a combination of on-line dynamic lossless test compression techniques (which employ simple learning strategies) and vector quantization. These concepts are described. How these concepts are combined to form a new strategy for performing dynamic on-line lossy compression is discussed. Finally, the implementation of this algorithm in a massively parallel fashion on the MPP is discussed.

  16. Hyperspectral Imaging of fecal contamination on chickens

    NASA Technical Reports Server (NTRS)

    2003-01-01

    ProVision Technologies, a NASA research partnership center at Sternis Space Center in Mississippi, has developed a new hyperspectral imaging (HSI) system that is much smaller than the original large units used aboard remote sensing aircraft and satellites. The new apparatus is about the size of a breadbox. Health-related applications of HSI include scanning chickens during processing to help prevent contaminated food from getting to the table. ProVision is working with Sanderson Farms of Mississippi and the U.S. Department of Agriculture. ProVision has a record in its spectral library of the unique spectral signature of fecal contamination, so chickens can be scanned and those with a positive reading can be separated. HSI sensors can also determine the quantity of surface contamination. Research in this application is quite advanced, and ProVision is working on a licensing agreement for the technology. The potential for future use of this equipment in food processing and food safety is enormous.

  17. MWIR hyperspectral imaging with the MIDAS instrument

    NASA Astrophysics Data System (ADS)

    Honniball, Casey I.; Wright, Rob; Lucey, Paul G.

    2017-02-01

    Hyperspectral imaging (HSI) in the Mid-Wave InfraRed (MWIR, 3-5 microns) can provide information on a variety of science applications from determining the chemical composition of lava lakes on Jupiter's moon Io, to investigating the amount of carbon liberated into the Earth's atmosphere during a wildfire. The limited signal available in the MWIR presents technical challenges to achieving high signal-to-noise ratios, and therefore it is typically necessary to cryogenically cool MWIR instruments. With recent improvements in microbolometer technology and emerging interferometric techniques, we have shown that uncooled microbolometers coupled with a Sagnac interferometer can achieve high signal-to-noise ratios for long-wave infrared HSI. To explore if this technique can be applied to the MWIR, this project, with funding from NASA, has built the Miniaturized Infrared Detector of Atmospheric Species (MIDAS). Standard characterization tests are used to compare MIDAS against a cryogenically cooled photon detector to evaluate the MIDAS instruments' ability to quantify gas concentrations. Atmospheric radiative transfer codes are in development to explore the limitations of MIDAS and identify the range of science objectives that MIDAS will most likely excel at. We will simulate science applications with gas cells filled with varying gas concentrations and varying source temperatures to verify our results from lab characterization and our atmospheric modeling code.

  18. Food inspection using hyperspectral imaging and SVDD

    NASA Astrophysics Data System (ADS)

    Uslu, Faruk Sukru; Binol, Hamidullah; Bal, Abdullah

    2016-05-01

    Nowadays food inspection and evaluation is becoming significant public issue, therefore robust, fast, and environmentally safe methods are studied instead of human visual assessment. Optical sensing is one of the potential methods with the properties of being non-destructive and accurate. As a remote sensing technology, hyperspectral imaging (HSI) is being successfully applied by researchers because of having both spatial and detailed spectral information about studied material. HSI can be used to inspect food quality and safety estimation such as meat quality assessment, quality evaluation of fish, detection of skin tumors on chicken carcasses, and classification of wheat kernels in the food industry. In this paper, we have implied an experiment to detect fat ratio in ground meat via Support Vector Data Description which is an efficient and robust one-class classifier for HSI. The experiments have been implemented on two different ground meat HSI data sets with different fat percentage. Addition to these implementations, we have also applied bagging technique which is mostly used as an ensemble method to improve the prediction ratio. The results show that the proposed methods produce high detection performance for fat ratio in ground meat.

  19. a Diversified Deep Belief Network for Hyperspectral Image Classification

    NASA Astrophysics Data System (ADS)

    Zhong, P.; Gong, Z. Q.; Schönlieb, C.

    2016-06-01

    In recent years, researches in remote sensing demonstrated that deep architectures with multiple layers can potentially extract abstract and invariant features for better hyperspectral image classification. Since the usual real-world hyperspectral image classification task cannot provide enough training samples for a supervised deep model, such as convolutional neural networks (CNNs), this work turns to investigate the deep belief networks (DBNs), which allow unsupervised training. The DBN trained over limited training samples usually has many "dead" (never responding) or "potential over-tolerant" (always responding) latent factors (neurons), which decrease the DBN's description ability and thus finally decrease the hyperspectral image classification performance. This work proposes a new diversified DBN through introducing a diversity promoting prior over the latent factors during the DBN pre-training and fine-tuning procedures. The diversity promoting prior in the training procedures will encourage the latent factors to be uncorrelated, such that each latent factor focuses on modelling unique information, and all factors will be summed up to capture a large proportion of information and thus increase description ability and classification performance of the diversified DBNs. The proposed method was evaluated over the well-known real-world hyperspectral image dataset. The experiments demonstrate that the diversified DBNs can obtain much better results than original DBNs and comparable or even better performances compared with other recent hyperspectral image classification methods.

  20. In vivo and in vitro hyperspectral imaging of cervical neoplasia

    NASA Astrophysics Data System (ADS)

    Wang, Chaojian; Zheng, Wenli; Bu, Yanggao; Chang, Shufang; Tong, Qingping; Zhang, Shiwu; Xu, Ronald X.

    2014-02-01

    Cervical cancer is a prevalent disease in many developing countries. Colposcopy is the most common approach for screening cervical intraepithelial neoplasia (CIN). However, its clinical efficacy heavily relies on the examiner's experience. Spectroscopy is a potentially effective method for noninvasive diagnosis of cervical neoplasia. In this paper, we introduce a hyperspectral imaging technique for noninvasive detection and quantitative analysis of cervical neoplasia. A hyperspectral camera is used to collect the reflectance images of the entire cervix under xenon lamp illumination, followed by standard colposcopy examination and cervical tissue biopsy at both normal and abnormal sites in different quadrants. The collected reflectance data are calibrated and the hyperspectral signals are extracted. Further spectral analysis and image processing works are carried out to classify tissue into different types based on the spectral characteristics at different stages of cervical intraepithelial neoplasia. The hyperspectral camera is also coupled with a lab microscope to acquire the hyperspectral transmittance images of the pathological slides. The in vivo and the in vitro imaging results are compared with clinical findings to assess the accuracy and efficacy of the method.

  1. Hyperspectral retinal imaging with a spectrally tunable light source

    NASA Astrophysics Data System (ADS)

    Francis, Robert P.; Zuzak, Karel J.; Ufret-Vincenty, Rafael

    2011-03-01

    Hyperspectral retinal imaging can measure oxygenation and identify areas of ischemia in human patients, but the devices used by current researchers are inflexible in spatial and spectral resolution. We have developed a flexible research prototype consisting of a DLP®-based spectrally tunable light source coupled to a fundus camera to quickly explore the effects of spatial resolution, spectral resolution, and spectral range on hyperspectral imaging of the retina. The goal of this prototype is to (1) identify spectral and spatial regions of interest for early diagnosis of diseases such as glaucoma, age-related macular degeneration (AMD), and diabetic retinopathy (DR); and (2) define required specifications for commercial products. In this paper, we describe the challenges and advantages of using a spectrally tunable light source for hyperspectral retinal imaging, present clinical results of initial imaging sessions, and describe how this research can be leveraged into specifying a commercial product.

  2. Hyperspectral imaging techniques for the characterization of Haematococcus pluvialis (Chlorophyceae).

    PubMed

    Nogami, Satoru; Ohnuki, Shinsuke; Ohya, Yoshikazu

    2014-10-01

    A hyperspectral imaging camera was combined with a bright-field microscope to investigate the intracellular distribution of pigments in cells of the green microalga Haematococcus pluvialis, a synonym for H. lacustris (Chlorophyceae). We applied multivariate curve resolution to the hyperspectral image data to estimate the pigment contents in culture and revealed that the predicted values were consistent with actual measurements obtained from extracted pigments. Because it was possible to estimate pigment contents in every pixel, the intracellular distribution of the pigments was investigated during various life-cycle stages. Astaxanthin was localized specifically at the eyespot of zoospores in early culture stages. Then, it became widely distributed in cells, but subsequently localized differently than the chl. Integrated with our recently developed image-processing program "HaematoCalMorph," the hyperspectral imaging system was useful for monitoring intracellular distributions of pigments during culture as well as for studying cellular responses under various conditions.

  3. [Nondestructive discrimination of waxed apples based on hyperspectral imaging technology].

    PubMed

    Gao, Jun-Feng; Zhang, Hai-Liang; Kong, Wen-Wen; He, Yong

    2013-07-01

    The potential of hyperspectral imaging technology was evaluated for discriminating three types of waxed apples. Three types of apples smeared with fruit wax, with industrial wax, and not waxed respectively were imaged by a hyperspectral imaging system with a spectral range of 308-1 024 nm. ENVI software processing platform was used for extracting hyperspectral image object of diffuse reflection spectral response characteristics. Eighty four of 126 apple samples were selected randomly as calibration set and the rest were prediction set. After different preprocess, the related mathematical models were established by using the partial least squares (PLS), the least squares support vector machine (LS-SVM) and BP neural network methods and so on. The results showed that the model of MSC-SPA-LSSVM was the best to discriminate three kinds of waxed apples with 100%, 100% and 92.86% correct prediction respectively.

  4. Hyperspectral imaging using the single-pixel Fourier transform technique

    NASA Astrophysics Data System (ADS)

    Jin, Senlin; Hui, Wangwei; Wang, Yunlong; Huang, Kaicheng; Shi, Qiushuai; Ying, Cuifeng; Liu, Dongqi; Ye, Qing; Zhou, Wenyuan; Tian, Jianguo

    2017-03-01

    Hyperspectral imaging technology is playing an increasingly important role in the fields of food analysis, medicine and biotechnology. To improve the speed of operation and increase the light throughput in a compact equipment structure, a Fourier transform hyperspectral imaging system based on a single-pixel technique is proposed in this study. Compared with current imaging spectrometry approaches, the proposed system has a wider spectral range (400-1100 nm), a better spectral resolution (1 nm) and requires fewer measurement data (a sample rate of 6.25%). The performance of this system was verified by its application to the non-destructive testing of potatoes.

  5. GRIN-optics-based hyperspectral imaging micro-sensor

    NASA Astrophysics Data System (ADS)

    Zhou, Wei; Leger, James

    2007-09-01

    By utilizing diffractive, refractive and graded-index optics technology, a miniature (1 mm x 1 mm x 2 mm) Computer-Tomography Imaging Spectrometer (CTIS) sensor has been designed with 16 independent optical channels working in a snap-shot mode for hyper-spectral imaging. The designed prototype covers a 400~700 nm wavelength range. One optical channel has been fabricated and characterized. By azimuthally rotating this optical channel along the optical axis and collecting different dispersed images to simulate the full sensor read-out, the full hyperspectral detection scheme has been demonstrated.

  6. Hyperspectral imaging using the single-pixel Fourier transform technique

    PubMed Central

    Jin, Senlin; Hui, Wangwei; Wang, Yunlong; Huang, Kaicheng; Shi, Qiushuai; Ying, Cuifeng; Liu, Dongqi; Ye, Qing; Zhou, Wenyuan; Tian, Jianguo

    2017-01-01

    Hyperspectral imaging technology is playing an increasingly important role in the fields of food analysis, medicine and biotechnology. To improve the speed of operation and increase the light throughput in a compact equipment structure, a Fourier transform hyperspectral imaging system based on a single-pixel technique is proposed in this study. Compared with current imaging spectrometry approaches, the proposed system has a wider spectral range (400–1100 nm), a better spectral resolution (1 nm) and requires fewer measurement data (a sample rate of 6.25%). The performance of this system was verified by its application to the non-destructive testing of potatoes. PMID:28338100

  7. Investigating coral hyperspectral properties across coral species and coral state using hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Mehrubeoglu, Mehrube; Smith, Dustin K.; Smith, Shane W.; Strychar, Kevin B.; McLauchlan, Lifford

    2013-09-01

    Coral reefs are one of the most diverse and threatened ecosystems in the world. Corals worldwide are at risk, and in many instances, dying due to factors that affect their environment resulting in deteriorating environmental conditions. Because corals respond quickly to the quality of the environment that surrounds them, corals have been identified as bioindicators of water quality and marine environmental health. The hyperspectral imaging system is proposed as a noninvasive tool to monitor different species of corals as well as coral state over time. This in turn can be used as a quick and non-invasive method to monitor environmental health that can later be extended to climate conditions. In this project, a laboratory-based hyperspectral imaging system is used to collect spectral and spatial information of corals. In the work presented here, MATLAB and ENVI software tools are used to view and process spatial information and coral spectral signatures to identify differences among the coral data. The results support the hypothesis that hyperspectral properties of corals vary among different coral species, and coral state over time, and hyperspectral imaging can be a used as a tool to document changes in coral species and state.

  8. Hyperspectral Imaging Sensors and the Marine Coastal Zone

    NASA Technical Reports Server (NTRS)

    Richardson, Laurie L.

    2000-01-01

    Hyperspectral imaging sensors greatly expand the potential of remote sensing to assess, map, and monitor marine coastal zones. Each pixel in a hyperspectral image contains an entire spectrum of information. As a result, hyperspectral image data can be processed in two very different ways: by image classification techniques, to produce mapped outputs of features in the image on a regional scale; and by use of spectral analysis of the spectral data embedded within each pixel of the image. The latter is particularly useful in marine coastal zones because of the spectral complexity of suspended as well as benthic features found in these environments. Spectral-based analysis of hyperspectral (AVIRIS) imagery was carried out to investigate a marine coastal zone of South Florida, USA. Florida Bay is a phytoplankton-rich estuary characterized by taxonomically distinct phytoplankton assemblages and extensive seagrass beds. End-member spectra were extracted from AVIRIS image data corresponding to ground-truth sample stations and well-known field sites. Spectral libraries were constructed from the AVIRIS end-member spectra and used to classify images using the Spectral Angle Mapper (SAM) algorithm, a spectral-based approach that compares the spectrum, in each pixel of an image with each spectrum in a spectral library. Using this approach different phytoplankton assemblages containing diatoms, cyanobacteria, and green microalgae, as well as benthic community (seagrasses), were mapped.

  9. Hyperspectral Imaging Sensors and the Marine Coastal Zone

    NASA Technical Reports Server (NTRS)

    Richardson, Laurie L.

    2000-01-01

    Hyperspectral imaging sensors greatly expand the potential of remote sensing to assess, map, and monitor marine coastal zones. Each pixel in a hyperspectral image contains an entire spectrum of information. As a result, hyperspectral image data can be processed in two very different ways: by image classification techniques, to produce mapped outputs of features in the image on a regional scale; and by use of spectral analysis of the spectral data embedded within each pixel of the image. The latter is particularly useful in marine coastal zones because of the spectral complexity of suspended as well as benthic features found in these environments. Spectral-based analysis of hyperspectral (AVIRIS) imagery was carried out to investigate a marine coastal zone of South Florida, USA. Florida Bay is a phytoplankton-rich estuary characterized by taxonomically distinct phytoplankton assemblages and extensive seagrass beds. End-member spectra were extracted from AVIRIS image data corresponding to ground-truth sample stations and well-known field sites. Spectral libraries were constructed from the AVIRIS end-member spectra and used to classify images using the Spectral Angle Mapper (SAM) algorithm, a spectral-based approach that compares the spectrum, in each pixel of an image with each spectrum in a spectral library. Using this approach different phytoplankton assemblages containing diatoms, cyanobacteria, and green microalgae, as well as benthic community (seagrasses), were mapped.

  10. Spectral response of microbolometers for hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Honniball, Casey I.; Wright, Rob; Lucey, Paul G.

    2017-02-01

    Hyperspectral imaging (HSI) is a technique with a growing list of applications and potential users, as this technique combines the power of imaging with the chemical discrimination of spectroscopy. Because HSI divides light from the scene into narrow slices of wavelength, the technique is typically thought to require cryogenic arrays to achieve the ultimate sensitivity. However, within the last two decades microbolometer arrays have improved in sensitivity, pixel count and total array area. In Hawai'i we have shown that microbolometer arrays can provide sufficient sensitivities for a variety of infrared HSI applications. The ability of microbolometer arrays to operate at ambient-temperature make them attractive candidates for low power applications, including space-based instruments on small satellites. We have two NASA projects to determine the suitability of uncooled microbolometers for HSI systems with the aim of HSI measurements from smaller satellites than is possible with cryogenic instruments. The suitability of a detector is governed in part by its spectral response. Microbolometers have wide variations in spectral response by technology and vendor, as part of our NASA projects we are conducting a spectral response measurement campaign on five different microbolometer cameras. Three of the cameras are sensitive to the long-wave infrared from 7.5 to 14 microns (two FLIR cameras and a Sofradir camera), one to the mid-wave infrared from 3 to 5 microns (LumaSense camera), and the last is sensitive to both regions from 3 to 14 microns (INO camera). Results from this campaign will be presented.

  11. The enhanced MODIS airborne simulator hyperspectral imager

    NASA Astrophysics Data System (ADS)

    Guerin, Daniel C.; Fisher, John; Graham, Edward R.

    2011-06-01

    The EMAS-HS or Enhanced MODIS Airborne Simulator is an upgrade to the solar reflected and thermal infrared channels of NASA's MODIS Airborne Simulator (MAS). In the solar reflected bands, the MAS scanner functionality will be augmented with the addition of this separate pushbroom hyperspectral instrument. As well as increasing the spectral resolution of MAS beyond 10 nm, this spectrometer is designed to maintain a stable calibration that can be transferred to the existing MAS sensor. The design emphasizes environmental control and on-board radiometric stability monitoring. The system is designed for high-altitude missions on the ER-2 and the Global Hawk platforms. System trades optimize performance in MODIS spectral bands that support land, cloud, aerosol, and atmospheric water studies. The primary science mission driving the development is high altitude cloud imaging, with secondary missions possible for ocean color. The sensor uses two Offner spectrometers to cover the 380-2400 nm spectral range. It features an all-reflective telescope with a 50° full field-of-view. A dichroic cold mirror will split the image from the telescope, with longer radiation transmitted to the SWIR spectrometer. The VNIR spectrometer uses a TE-cooled Si CCD detector that samples the spectrum at 2.5 nm intervals, while the SWIR spectrometer uses a Stirling-cooled hybrid HgCdTe detector to sample the spectrum at 10 nm per band. Both spectrometers will feature 1.05 mRad instantaneous fields-of-view registered to the MAS scanner IFOV's.

  12. Compressive Sensing for Quantum Imaging

    NASA Astrophysics Data System (ADS)

    Howland, Gregory A.

    This thesis describes the application of compressive sensing to several challenging problems in quantum imaging with practical and fundamental implications. Compressive sensing is a measurement technique that compresses a signal during measurement such that it can be dramatically undersampled. Compressive sensing has been shown to be an extremely efficient measurement technique for imaging, particularly when detector arrays are not available. The thesis first reviews compressive sensing through the lens of quantum imaging and quantum measurement. Four important applications and their corresponding experiments are then described in detail. The first application is a compressive sensing, photon-counting lidar system. A novel depth mapping technique that uses standard, linear compressive sensing is described. Depth maps up to 256 x 256 pixel transverse resolution are recovered with depth resolution less than 2.54 cm. The first three-dimensional, photon counting video is recorded at 32 x 32 pixel resolution and 14 frames-per-second. The second application is the use of compressive sensing for complementary imaging---simultaneously imaging the transverse-position and transverse-momentum distributions of optical photons. This is accomplished by taking random, partial projections of position followed by imaging the momentum distribution on a cooled CCD camera. The projections are shown to not significantly perturb the photons' momenta while allowing high resolution position images to be reconstructed using compressive sensing. A variety of objects and their diffraction patterns are imaged including the double slit, triple slit, alphanumeric characters, and the University of Rochester logo. The third application is the use of compressive sensing to characterize spatial entanglement of photon pairs produced by spontaneous parametric downconversion. The technique gives a theoretical speedup N2/log N for N-dimensional entanglement over the standard raster scanning technique

  13. Identification of seedling cabbages and weeds using hyperspectral imaging

    USDA-ARS?s Scientific Manuscript database

    Target detectionis one of research focues for precision chemical application. This study developed a method to identify seedling cabbages and weeds using hyperspectral spectral imaging. In processing the image data, with ENVI software, after dimension reduction, noise reduction, de-correlation for h...

  14. LED lighting for use in multispectral and hyperspectral imaging

    USDA-ARS?s Scientific Manuscript database

    Lighting for machine vision and hyperspectral imaging is an important component for collecting high quality imagery. However, it is often given minimal consideration in the overall design of an imaging system. Tungsten-halogens lamps are the most common source of illumination for broad spectrum appl...

  15. Sensor noise informed representation of hyperspectral data, with benefits for image storage and processing.

    PubMed

    Skauli, Torbjørn

    2011-07-04

    Many types of hyperspectral image processing can benefit from knowledge of noise levels in the data, which can be derived from sensor physics. Surprisingly, such information is rarely provided or exploited. Usually, the image data are represented as radiance values, but this representation can lead to suboptimal results, for example in spectral difference metrics. Also, radiance data do not provide an appropriate baseline for calculation of image compression ratios. This paper defines two alternative representations of hyperspectral image data, aiming to make sensor noise accessible to image processing. A "corrected raw data" representation is proportional to the photoelectron count and can be processed like radiance data, while also offering simpler estimation of noise and somewhat more compact storage. A variance-stabilized representation is obtained by square-root transformation of the photodetector signal to make the noise signal-independent and constant across all bands while also reducing data volume by almost a factor 2. Then the data size is comparable to the fundamental information capacity of the sensor, giving a more appropriate measure of uncompressed data size. It is noted that the variance-stabilized representation has parallels in other fields of imaging. The alternative data representations provide an opportunity to reformulate hyperspectral processing algorithms to take actual sensor noise into account.

  16. Parallel hyperspectral image reconstruction using random projections

    NASA Astrophysics Data System (ADS)

    Sevilla, Jorge; Martín, Gabriel; Nascimento, José M. P.

    2016-10-01

    Spaceborne sensors systems are characterized by scarce onboard computing and storage resources and by communication links with reduced bandwidth. Random projections techniques have been demonstrated as an effective and very light way to reduce the number of measurements in hyperspectral data, thus, the data to be transmitted to the Earth station is reduced. However, the reconstruction of the original data from the random projections may be computationally expensive. SpeCA is a blind hyperspectral reconstruction technique that exploits the fact that hyperspectral vectors often belong to a low dimensional subspace. SpeCA has shown promising results in the task of recovering hyperspectral data from a reduced number of random measurements. In this manuscript we focus on the implementation of the SpeCA algorithm for graphics processing units (GPU) using the compute unified device architecture (CUDA). Experimental results conducted using synthetic and real hyperspectral datasets on the GPU architecture by NVIDIA: GeForce GTX 980, reveal that the use of GPUs can provide real-time reconstruction. The achieved speedup is up to 22 times when compared with the processing time of SpeCA running on one core of the Intel i7-4790K CPU (3.4GHz), with 32 Gbyte memory.

  17. Perceptual Image Compression in Telemedicine

    NASA Technical Reports Server (NTRS)

    Watson, Andrew B.; Ahumada, Albert J., Jr.; Eckstein, Miguel; Null, Cynthia H. (Technical Monitor)

    1996-01-01

    The next era of space exploration, especially the "Mission to Planet Earth" will generate immense quantities of image data. For example, the Earth Observing System (EOS) is expected to generate in excess of one terabyte/day. NASA confronts a major technical challenge in managing this great flow of imagery: in collection, pre-processing, transmission to earth, archiving, and distribution to scientists at remote locations. Expected requirements in most of these areas clearly exceed current technology. Part of the solution to this problem lies in efficient image compression techniques. For much of this imagery, the ultimate consumer is the human eye. In this case image compression should be designed to match the visual capacities of the human observer. We have developed three techniques for optimizing image compression for the human viewer. The first consists of a formula, developed jointly with IBM and based on psychophysical measurements, that computes a DCT quantization matrix for any specified combination of viewing distance, display resolution, and display brightness. This DCT quantization matrix is used in most recent standards for digital image compression (JPEG, MPEG, CCITT H.261). The second technique optimizes the DCT quantization matrix for each individual image, based on the contents of the image. This is accomplished by means of a model of visual sensitivity to compression artifacts. The third technique extends the first two techniques to the realm of wavelet compression. Together these two techniques will allow systematic perceptual optimization of image compression in NASA imaging systems. Many of the image management challenges faced by NASA are mirrored in the field of telemedicine. Here too there are severe demands for transmission and archiving of large image databases, and the imagery is ultimately used primarily by human observers, such as radiologists. In this presentation I will describe some of our preliminary explorations of the applications

  18. Perceptual Image Compression in Telemedicine

    NASA Technical Reports Server (NTRS)

    Watson, Andrew B.; Ahumada, Albert J., Jr.; Eckstein, Miguel; Null, Cynthia H. (Technical Monitor)

    1996-01-01

    The next era of space exploration, especially the "Mission to Planet Earth" will generate immense quantities of image data. For example, the Earth Observing System (EOS) is expected to generate in excess of one terabyte/day. NASA confronts a major technical challenge in managing this great flow of imagery: in collection, pre-processing, transmission to earth, archiving, and distribution to scientists at remote locations. Expected requirements in most of these areas clearly exceed current technology. Part of the solution to this problem lies in efficient image compression techniques. For much of this imagery, the ultimate consumer is the human eye. In this case image compression should be designed to match the visual capacities of the human observer. We have developed three techniques for optimizing image compression for the human viewer. The first consists of a formula, developed jointly with IBM and based on psychophysical measurements, that computes a DCT quantization matrix for any specified combination of viewing distance, display resolution, and display brightness. This DCT quantization matrix is used in most recent standards for digital image compression (JPEG, MPEG, CCITT H.261). The second technique optimizes the DCT quantization matrix for each individual image, based on the contents of the image. This is accomplished by means of a model of visual sensitivity to compression artifacts. The third technique extends the first two techniques to the realm of wavelet compression. Together these two techniques will allow systematic perceptual optimization of image compression in NASA imaging systems. Many of the image management challenges faced by NASA are mirrored in the field of telemedicine. Here too there are severe demands for transmission and archiving of large image databases, and the imagery is ultimately used primarily by human observers, such as radiologists. In this presentation I will describe some of our preliminary explorations of the applications

  19. Content-based hyperspectral image retrieval using spectral unmixing

    NASA Astrophysics Data System (ADS)

    Plaza, Antonio J.

    2011-11-01

    The purpose of content-based image retrieval (CBIR) is to retrieve, from real data stored in a database, information that is relevant to a query. A major challenge for the development of efficient CBIR systems in the context of hyperspectral remote sensing applications is how to deal with the extremely large volumes of data produced by current Earth-observing (EO) imaging spectrometers. The data resulting from EO campaigns often comprises many Gigabytes per flight. When multiple instruments or timelines are combined, this leads to the collection of massive amounts of data coming from heterogeneous sources, and these data sets need to be effectively stored, managed, shared and retrieved. Furthermore, the growth in size and number of hyperspectral data archives demands more sophisticated search capabilities to allow users to locate and reuse data acquired in the past. In this paper we develop a new strategy to effectively retrieve hyperspectral image data sets using spectral unmixing concepts. Spectral unmixing is a very important task for hyperspectral data exploitation since the spectral signatures collected in natural environments are invariably a mixture of the pure signatures of the various materials found within the spatial extent of the ground instantaneous field view of the imaging instrument. In this work, we use the information provided by spectral unmixing (i.e. the spectral endmembers and their corresponding abundances in the scene) as effective meta-data to develop a new CBIR system that can assist users in the task of efficiently searching hyperspectral image instances in large data repositories. The proposed approach is validated using a collection of 154 hyperspectral data sets (comprising seven full flightlines) gathered by NASA using the Airborne Visible Infra-Red Imaging Spectrometer (AVIRIS) over the World Trade Center (WTC) area in New York City during the last two weeks of September, 2001, only a few days after the terrorist attacks that

  20. Hyperspectral Image Super-resolution via Non-negative Structured Sparse Representation.

    PubMed

    Dong, Weisheng; Fu, Fazuo; Shi, Guangming; Cao, Xun; Wu, Jinjian; Li, Guangyu; Li, Xin

    2016-03-22

    Hyperspectral imaging has many applications from agriculture and astronomy to surveillance and mineralogy. However, it is often challenging to obtain High-resolution (HR) hyperspectral images using existing hyperspectral imaging techniques due to various hardware limitations. In this paper, we propose a new Hyperspectral image super-resolution method from a low-resolution (LR) image and a HR reference image of the same scene. The estimation of the HR hyperspectral image is formulated as a joint estimation of the hyperspectral dictionary and the sparse codes based on the prior knowledge of the spatialspectral sparsity of the hyperspectral image. The hyperspectral dictionary representing prototype reflectance spectra vectors of the scene is first learned from the input LR image. Specifically, an efficient non-negative dictionary learning algorithm using the block-coordinate descent optimization technique is proposed. Then, sparse codes of the desired HR hyperspectral image with respect to learned hyperspectral basis are estimated from the pair of LR and HR reference images. To improve the accuracy of non-negtative sparse coding, a clustering-based structured sparse coding method is proposed to exploit the spatial correlation among the learned sparse codes. Experimental results on both public datasets and real LR hypspectral images suggest that the proposed method substantially outperforms several existing HR hyperspectral image recovery techniques in the literature in terms of both objective quality metrics and computational efficiency.

  1. Hyperspectral Image Super-Resolution via Non-Negative Structured Sparse Representation.

    PubMed

    Dong, Weisheng; Fu, Fazuo; Shi, Guangming; Cao, Xun; Wu, Jinjian; Li, Guangyu; Li, Guangyu

    2016-05-01

    Hyperspectral imaging has many applications from agriculture and astronomy to surveillance and mineralogy. However, it is often challenging to obtain high-resolution (HR) hyperspectral images using existing hyperspectral imaging techniques due to various hardware limitations. In this paper, we propose a new hyperspectral image super-resolution method from a low-resolution (LR) image and a HR reference image of the same scene. The estimation of the HR hyperspectral image is formulated as a joint estimation of the hyperspectral dictionary and the sparse codes based on the prior knowledge of the spatial-spectral sparsity of the hyperspectral image. The hyperspectral dictionary representing prototype reflectance spectra vectors of the scene is first learned from the input LR image. Specifically, an efficient non-negative dictionary learning algorithm using the block-coordinate descent optimization technique is proposed. Then, the sparse codes of the desired HR hyperspectral image with respect to learned hyperspectral basis are estimated from the pair of LR and HR reference images. To improve the accuracy of non-negative sparse coding, a clustering-based structured sparse coding method is proposed to exploit the spatial correlation among the learned sparse codes. The experimental results on both public datasets and real LR hypspectral images suggest that the proposed method substantially outperforms several existing HR hyperspectral image recovery techniques in the literature in terms of both objective quality metrics and computational efficiency.

  2. Compressive passive millimeter wave imager

    DOEpatents

    Gopalsami, Nachappa; Liao, Shaolin; Elmer, Thomas W; Koehl, Eugene R; Heifetz, Alexander; Raptis, Apostolos C

    2015-01-27

    A compressive scanning approach for millimeter wave imaging and sensing. A Hadamard mask is positioned to receive millimeter waves from an object to be imaged. A subset of the full set of Hadamard acquisitions is sampled. The subset is used to reconstruct an image representing the object.

  3. Spatial-spectral method for classification of hyperspectral images.

    PubMed

    Bian, Xiaoyong; Zhang, Tianxu; Yan, Luxin; Zhang, Xiaolong; Fang, Houzhang; Liu, Hai

    2013-03-15

    Spatial-spectral approach with spatially adaptive classification of hyperspectral images is proposed. The rotation-invariant spatial texture information for each object is exploited and incorporated into the classifier by using the modified local Gabor binary pattern to distinguish different types of classes of interest. The proposed method can effectively suppress anisotropic texture in spatially separate classes as well as improve the discrimination among classes. Moreover, it becomes more robust with the within-class variation. Experimental results on the classification of three real hyperspectral remote sensing images demonstrate the effectiveness of the proposed approach.

  4. Sparse Superpixel Unmixing for Exploratory Analysis of CRISM Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Thompson, David R.; Castano, Rebecca; Gilmore, Martha S.

    2009-01-01

    Fast automated analysis of hyperspectral imagery can inform observation planning and tactical decisions during planetary exploration. Products such as mineralogical maps can focus analysts' attention on areas of interest and assist data mining in large hyperspectral catalogs. In this work, sparse spectral unmixing drafts mineral abundance maps with Compact Reconnaissance Imaging Spectrometer (CRISM) images from the Mars Reconnaissance Orbiter. We demonstrate a novel "superpixel" segmentation strategy enabling efficient unmixing in an interactive session. Tests correlate automatic unmixing results based on redundant spectral libraries against hand-tuned summary products currently in use by CRISM researchers.

  5. Spatial-scanning hyperspectral imaging probe for bio-imaging applications

    NASA Astrophysics Data System (ADS)

    Lim, Hoong-Ta; Murukeshan, Vadakke Matham

    2016-03-01

    The three common methods to perform hyperspectral imaging are the spatial-scanning, spectral-scanning, and snapshot methods. However, only the spectral-scanning and snapshot methods have been configured to a hyperspectral imaging probe as of today. This paper presents a spatial-scanning (pushbroom) hyperspectral imaging probe, which is realized by integrating a pushbroom hyperspectral imager with an imaging probe. The proposed hyperspectral imaging probe can also function as an endoscopic probe by integrating a custom fabricated image fiber bundle unit. The imaging probe is configured by incorporating a gradient-index lens at the end face of an image fiber bundle that consists of about 50 000 individual fiberlets. The necessary simulations, methodology, and detailed instrumentation aspects that are carried out are explained followed by assessing the developed probe's performance. Resolution test targets such as United States Air Force chart as well as bio-samples such as chicken breast tissue with blood clot are used as test samples for resolution analysis and for performance validation. This system is built on a pushbroom hyperspectral imaging system with a video camera and has the advantage of acquiring information from a large number of spectral bands with selectable region of interest. The advantages of this spatial-scanning hyperspectral imaging probe can be extended to test samples or tissues residing in regions that are difficult to access with potential diagnostic bio-imaging applications.

  6. Estimation of tissue optical parameters with hyperspectral imaging and spectral unmixing

    NASA Astrophysics Data System (ADS)

    Lu, Guolan; Qin, Xulei; Wang, Dongsheng; Chen, Zhuo G.; Fei, Baowei

    2015-03-01

    Early detection of oral cancer and its curable precursors can improve patient survival and quality of life. Hyperspectral imaging (HSI) holds the potential for noninvasive early detection of oral cancer. The quantification of tissue chromophores by spectral unmixing of hyperspectral images could provide insights for evaluating cancer progression. In this study, non-negative matrix factorization has been applied for decomposing hyperspectral images into physiologically meaningful chromophore concentration maps. The approach has been validated by computer-simulated hyperspectral images and in vivo tumor hyperspectral images from a head and neck cancer animal model.

  7. Estimation of Tissue Optical Parameters with Hyperspectral Imaging and Spectral Unmixing

    PubMed Central

    Lu, Guolan; Qin, Xulei; Wang, Dongsheng; Chen, Zhuo Georgia; Fei, Baowei

    2015-01-01

    Early detection of oral cancer and its curable precursors can improve patient survival and quality of life. Hyperspectral imaging (HSI) holds the potential for noninvasive early detection of oral cancer. The quantification of tissue chromophores by spectral unmixing of hyperspectral images could provide insights for evaluating cancer progression. In this study, non-negative matrix factorization has been applied for decomposing hyperspectral images into physiologically meaningful chromophore concentration maps. The approach has been validated by computer-simulated hyperspectral images and in vivo tumor hyperspectral images from a head and neck cancer animal model. PMID:26855467

  8. Extended SWIR imaging sensors for hyperspectral imaging applications

    NASA Astrophysics Data System (ADS)

    Weber, A.; Benecke, M.; Wendler, J.; Sieck, A.; Hübner, D.; Figgemeier, H.; Breiter, R.

    2016-05-01

    AIM has developed SWIR modules including FPAs based on liquid phase epitaxy (LPE) grown MCT usable in a wide range of hyperspectral imaging applications. Silicon read-out integrated circuits (ROIC) provide various integration and readout modes including specific functions for spectral imaging applications. An important advantage of MCT based detectors is the tunable band gap. The spectral sensitivity of MCT detectors can be engineered to cover the extended SWIR spectral region up to 2.5μm without compromising in performance. AIM developed the technology to extend the spectral sensitivity of its SWIR modules also into the VIS. This has been successfully demonstrated for 384x288 and 1024x256 FPAs with 24μm pitch. Results are presented in this paper. The FPAs are integrated into compact dewar cooler configurations using different types of coolers, like rotary coolers, AIM's long life split linear cooler MCC030 or extreme long life SF100 Pulse Tube cooler. The SWIR modules include command and control electronics (CCE) which allow easy interfacing using a digital standard interface. The development status and performance results of AIM's latest MCT SWIR modules suitable for hyperspectral systems and applications will be presented.

  9. Hyperspectral and Multispectral Imaging Technique for Food Quality and Safety Evaluation

    USDA-ARS?s Scientific Manuscript database

    In this chapter, recently developed ARS line-scan hyperspectral-based sensing technologies to address agro-food safety concerns are presented including a case study using the laboratory-based hyperspectral imaging platforms. An online line-scan imaging system capable of both hyperspectral and multi...

  10. Spectral-Spatial Classification of Hyperspectral Images Using Hierarchical Optimization

    NASA Technical Reports Server (NTRS)

    Tarabalka, Yuliya; Tilton, James C.

    2011-01-01

    A new spectral-spatial method for hyperspectral data classification is proposed. For a given hyperspectral image, probabilistic pixelwise classification is first applied. Then, hierarchical step-wise optimization algorithm is performed, by iteratively merging neighboring regions with the smallest Dissimilarity Criterion (DC) and recomputing class labels for new regions. The DC is computed by comparing region mean vectors, class labels and a number of pixels in the two regions under consideration. The algorithm is converged when all the pixels get involved in the region merging procedure. Experimental results are presented on two remote sensing hyperspectral images acquired by the AVIRIS and ROSIS sensors. The proposed approach improves classification accuracies and provides maps with more homogeneous regions, when compared to previously proposed classification techniques.

  11. Hyperspectral Imaging and Related Field Methods: Building the Science

    NASA Technical Reports Server (NTRS)

    Goetz, Alexander F. H.; Steffen, Konrad; Wessman, Carol

    1999-01-01

    The proposal requested funds for the computing power to bring hyperspectral image processing into undergraduate and graduate remote sensing courses. This upgrade made it possible to handle more students in these oversubscribed courses and to enhance CSES' summer short course entitled "Hyperspectral Imaging and Data Analysis" provided for government, industry, university and military. Funds were also requested to build field measurement capabilities through the purchase of spectroradiometers, canopy radiation sensors and a differential GPS system. These instruments provided systematic and complete sets of field data for the analysis of hyperspectral data with the appropriate radiometric and wavelength calibration as well as atmospheric data needed for application of radiative transfer models. The proposed field equipment made it possible to team-teach a new field methods course, unique in the country, that took advantage of the expertise of the investigators rostered in three different departments, Geology, Geography and Biology.

  12. Hyperspectral image classification based on volumetric texture and dimensionality reduction

    NASA Astrophysics Data System (ADS)

    Su, Hongjun; Sheng, Yehua; Du, Peijun; Chen, Chen; Liu, Kui

    2015-06-01

    A novel approach using volumetric texture and reduced-spectral features is presented for hyperspectral image classification. Using this approach, the volumetric textural features were extracted by volumetric gray-level co-occurrence matrices (VGLCM). The spectral features were extracted by minimum estimated abundance covariance (MEAC) and linear prediction (LP)-based band selection, and a semi-supervised k-means (SKM) clustering method with deleting the worst cluster (SKMd) bandclustering algorithms. Moreover, four feature combination schemes were designed for hyperspectral image classification by using spectral and textural features. It has been proven that the proposed method using VGLCM outperforms the gray-level co-occurrence matrices (GLCM) method, and the experimental results indicate that the combination of spectral information with volumetric textural features leads to an improved classification performance in hyperspectral imagery.

  13. Combining hyperspectral imaging and Raman spectroscopy for remote chemical sensing

    NASA Astrophysics Data System (ADS)

    Ingram, John M.; Lo, Edsanter

    2008-04-01

    The Photonics Research Center at the United States Military Academy is conducting research to demonstrate the feasibility of combining hyperspectral imaging and Raman spectroscopy for remote chemical detection over a broad area of interest. One limitation of future trace detection systems is their ability to analyze large areas of view. Hyperspectral imaging provides a balance between fast spectral analysis and scanning area. Integration of a hyperspectral system capable of remote chemical detection will greatly enhance our soldiers' ability to see the battlefield to make threat related decisions. It can also queue the trace detection systems onto the correct interrogation area saving time and reconnaissance/surveillance resources. This research develops both the sensor design and the detection/discrimination algorithms. The one meter remote detection without background radiation is a simple proof of concept.

  14. Super pixel-level dictionary learning for hyperspectral image classification

    NASA Astrophysics Data System (ADS)

    Zhao, Wei; Zhu, Wen; Liao, Bo; Fu, Xiangzheng

    2017-08-01

    This paper presents a superpixel-level dictionary learning model for hyperspectral data. The idea is to divide the hyperspectral image into a number of super-pixels by means of the super-pixel segmentation method. Each super-pixel is a spatial neighborhood called contextual group. That is, each pixel is represented using a linear combination of a few dictionary items learned from the train data, but since pixels inside a super-pixel are often consisting of the same materials, their linear combinations are constrained to use common items from the dictionary. To this end, the sparse coefficients of the context group have a common sparse pattern by using the joint sparse regularizer for dictionary learning. The sparse coefficients are then used for classification using linear support vector machines. The validity of the proposed method is experimentally verified on a real hyperspectral images.

  15. Single-pixel hyperspectral imaging for real-time cancer detection: detecting damage in ex vivo porcine tissue samples

    NASA Astrophysics Data System (ADS)

    Peller, Joseph; Farahi, Faramarz; Trammell, Susan R.

    2016-03-01

    We are developing a single-pixel hyperspectral imaging system based on compressive sensing that acquires spatial and spectral information simultaneously. Our spectral imaging system uses autofluorescencent emission from collagen (400 nm) and NAD(P)H (475 nm), as well as, differences in the optical reflectance spectra as diagnostics for differentiating between healthy and diseased tissue. In this study, we demonstrate the ability of our imaging system to discriminate between healthy and damaged porcine epidermal tissue. Healthy porcine epidermal tissue samples (n=11) were imaged ex vivo using our hyperspectral system. The amount of NAD(P)H emission and the reflectance properties were approximately constant across the surface of healthy tissue samples. The tissue samples were then thermally damaged using an 1850 nm thulium fiber laser and re-imaged after laser irradiation. The damaged regions were clearly visible in the hyperspectral images as the thermal damage altered the fluorescent emission of NAD(P)H and changed the scattering properties of the tissue. The extent of the damaged regions was determined based on the hyperspectral images and these estimates were compared to damage extents measured in white light images acquired with a traditional camera. The extent of damage determined via hyperspectral imaging was in good agreement with estimates based on white light imaging indicating that our system is capable of differentiating between healthy and damaged tissue. Possible applications of our single pixel hyperspectral imaging system range from real-time determination of tumor margins during surgery to the use of this technique in the pathology lab to aid with cancer diagnosis and staging.

  16. Advances in Spectral-Spatial Classification of Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Fauvel, Mathieu; Tarabalka, Yuliya; Benediktsson, Jon Atli; Chanussot, Jocelyn; Tilton, James C.

    2012-01-01

    Recent advances in spectral-spatial classification of hyperspectral images are presented in this paper. Several techniques are investigated for combining both spatial and spectral information. Spatial information is extracted at the object (set of pixels) level rather than at the conventional pixel level. Mathematical morphology is first used to derive the morphological profile of the image, which includes characteristics about the size, orientation and contrast of the spatial structures present in the image. Then the morphological neighborhood is defined and used to derive additional features for classification. Classification is performed with support vector machines using the available spectral information and the extracted spatial information. Spatial post-processing is next investigated to build more homogeneous and spatially consistent thematic maps. To that end, three presegmentation techniques are applied to define regions that are used to regularize the preliminary pixel-wise thematic map. Finally, a multiple classifier system is defined to produce relevant markers that are exploited to segment the hyperspectral image with the minimum spanning forest algorithm. Experimental results conducted on three real hyperspectral images with different spatial and spectral resolutions and corresponding to various contexts are presented. They highlight the importance of spectral-spatial strategies for the accurate classification of hyperspectral images and validate the proposed methods.

  17. Advances in Spectral-Spatial Classification of Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Fauvel, Mathieu; Tarabalka, Yuliya; Benediktsson, Jon Atli; Chanussot, Jocelyn; Tilton, James C.

    2012-01-01

    Recent advances in spectral-spatial classification of hyperspectral images are presented in this paper. Several techniques are investigated for combining both spatial and spectral information. Spatial information is extracted at the object (set of pixels) level rather than at the conventional pixel level. Mathematical morphology is first used to derive the morphological profile of the image, which includes characteristics about the size, orientation, and contrast of the spatial structures present in the image. Then, the morphological neighborhood is defined and used to derive additional features for classification. Classification is performed with support vector machines (SVMs) using the available spectral information and the extracted spatial information. Spatial postprocessing is next investigated to build more homogeneous and spatially consistent thematic maps. To that end, three presegmentation techniques are applied to define regions that are used to regularize the preliminary pixel-wise thematic map. Finally, a multiple-classifier (MC) system is defined to produce relevant markers that are exploited to segment the hyperspectral image with the minimum spanning forest algorithm. Experimental results conducted on three real hyperspectral images with different spatial and spectral resolutions and corresponding to various contexts are presented. They highlight the importance of spectral–spatial strategies for the accurate classification of hyperspectral images and validate the proposed methods.

  18. Advances in Spectral-Spatial Classification of Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Fauvel, Mathieu; Tarabalka, Yuliya; Benediktsson, Jon Atli; Chanussot, Jocelyn; Tilton, James C.

    2012-01-01

    Recent advances in spectral-spatial classification of hyperspectral images are presented in this paper. Several techniques are investigated for combining both spatial and spectral information. Spatial information is extracted at the object (set of pixels) level rather than at the conventional pixel level. Mathematical morphology is first used to derive the morphological profile of the image, which includes characteristics about the size, orientation and contrast of the spatial structures present in the image. Then the morphological neighborhood is defined and used to derive additional features for classification. Classification is performed with support vector machines using the available spectral information and the extracted spatial information. Spatial post-processing is next investigated to build more homogeneous and spatially consistent thematic maps. To that end, three presegmentation techniques are applied to define regions that are used to regularize the preliminary pixel-wise thematic map. Finally, a multiple classifier system is defined to produce relevant markers that are exploited to segment the hyperspectral image with the minimum spanning forest algorithm. Experimental results conducted on three real hyperspectral images with different spatial and spectral resolutions and corresponding to various contexts are presented. They highlight the importance of spectral-spatial strategies for the accurate classification of hyperspectral images and validate the proposed methods.

  19. a Review of Hyperspectral Imaging in Close Range Applications

    NASA Astrophysics Data System (ADS)

    Kurz, T. H.; Buckley, S. J.

    2016-06-01

    Hyperspectral imaging is an established method for material mapping, which has been conventionally applied from airborne and spaceborne platforms for a range of applications, including mineral and vegetation mapping, change detection and environmental studies. The main advantage of lightweight hyperspectral imagers lies in the flexibility to deploy them from various platforms (terrestrial imaging and from unmanned aerial vehicles; UAVs), as well as the high spectral resolution to cover an expanding wavelength range. In addition, spatial resolution allows object sampling distances from micrometres to tens of centimetres - complementary to conventional nadir-looking systems. When this new type of imaging device was initially released, few instruments were available and the applicability and potential of the method was restricted. Today, a wider range of instruments, with a range of specifications, is available, with significant improvements over the first generation of technology. In this contribution, the state-of-the-art of hyperspectral imaging will be reviewed from a close range measurement perspective, highlighting how the method supplements geometric modelling techniques. An overview of the processing workflow, adjusted to the more complex close range imaging scenario will be given. This includes the integration with 3D laser scanning and photogrammetric models to provide a geometric framework and real world coordinate system for the hyperspectral imagery.

  20. Advances in Hyperspectral and Multispectral Image Fusion and Spectral Unmixing

    NASA Astrophysics Data System (ADS)

    Lanaras, C.; Baltsavias, E.; Schindler, K.

    2015-08-01

    In this work, we jointly process high spectral and high geometric resolution images and exploit their synergies to (a) generate a fused image of high spectral and geometric resolution; and (b) improve (linear) spectral unmixing of hyperspectral endmembers at subpixel level w.r.t. the pixel size of the hyperspectral image. We assume that the two images are radiometrically corrected and geometrically co-registered. The scientific contributions of this work are (a) a simultaneous approach to image fusion and hyperspectral unmixing, (b) enforcing several physically plausible constraints during unmixing that are all well-known, but typically not used in combination, and (c) the use of efficient, state-of-the-art mathematical optimization tools to implement the processing. The results of our joint fusion and unmixing has the potential to enable more accurate and detailed semantic interpretation of objects and their properties in hyperspectral and multispectral images, with applications in environmental mapping, monitoring and change detection. In our experiments, the proposed method always improves the fusion compared to competing methods, reducing RMSE between 4% and 53%.

  1. Airborne Hyperspectral Imaging of Supraglacial Lakes in Greenland's Ablation Zone

    NASA Astrophysics Data System (ADS)

    Adler, J.; Behar, A. E.; Jacobson, N. T.

    2010-12-01

    In 2010 an airborne instrument was assembled to image supraglacial lakes near the Jakobshavn Isbrae of the Greenland Ice Sheet. The instrument was designed to fly on a helicopter, and consists of a hyperspectral imager, a GPS/inertial measurement unit (GPS/IMU), and a data-logging computer. A series of narrow visible optical channels ~13nm wide, such as found in a hyperspectral imager, are theorized to be useful in determining the depths of supraglacial lakes using techniques based on the Beer-Lambert-Bouguer Law. During June, several supraglacial lakes were selected for study each day, based upon MODIS imagery taken during the previous week. Flying over a given lake, several track lines were flown to image both shallow and deep sections of the lake, imaging the full range of depth for future algorithm development. The telescoping instrument mount was constructed to allow the sensor package to be deployed from a helicopter in-flight, with an unobstructed downward-facing field of view. The GPS/IMU records the pointing orientation, altitude, and geographical coordinates of the imager to the data-logger, in order to allow post-flight geo-referencing of the raw hyperspectral imagery. With this geo-referenced spectrum data, a depth map for a given lake can be calculated through reference to a water absorptivity model. This risk-reduction expedition to fly a helicopter-borne hyperspectral imager over the supraglacial lakes of Greenland was a success. The instrument mount for the imager worked as designed, and no vibration issues were encountered. As a result, we have confidence in the instrument platform's performance during future surveys of Greenland's supraglacial lakes. The hyperspectral imager, data acquisition computer, and geo-referencing services are provided by Resonon, Inc. of Bozeman, MT, and the GPS/IMU is manufactured by Cloudcap Technology of Hood River, OR.

  2. Fast DPCM scheme for lossless compression of aurora spectral images

    NASA Astrophysics Data System (ADS)

    Kong, Wanqiu; Wu, Jiaji

    2016-10-01

    Aurora has abundant information to be stored. Aurora spectral image electronically preserves spectral information and visual observation of aurora during a period to be studied later. These images are helpful for the research of earth-solar activities and to understand the aurora phenomenon itself. However, the images are produced with a quite high sampling frequency, which leads to the challenging transmission load. In order to solve the problem, lossless compression turns out to be required. Indeed, each frame of aurora spectral images differs from the classical natural image and also from the frame of hyperspectral image. Existing lossless compression algorithms are not quite applicable. On the other hand, the key of compression is to decorrelate between pixels. We consider exploiting a DPCM-based scheme for the lossless compression because DPCM is effective for decorrelation. Such scheme makes use of two-dimensional redundancy both in the spatial and spectral domain with a relatively low complexity. Besides, we also parallel it for a faster computation speed. All codes are implemented on a structure consists of nested for loops of which the outer and the inner loops are respectively designed for spectral and spatial decorrelation. And the parallel version is represented on CPU platform using different numbers of cores. Experimental results show that compared to traditional lossless compression methods, the DPCM scheme has great advantage in compression gain and meets the requirement of real-time transmission. Besides, the parallel version has expected computation performance with a high CPU utilization.

  3. Hyperspectral image analysis for plant stress detection

    USDA-ARS?s Scientific Manuscript database

    Abiotic and disease-induced stress significantly reduces plant productivity. Automated on-the-go mapping of plant stress allows timely intervention and mitigating of the problem before critical thresholds are exceeded, thereby, maximizing productivity. A hyperspectral camera analyzed the spectral ...

  4. Study on classification of pork quality using hyperspectral imaging technique

    NASA Astrophysics Data System (ADS)

    Zeng, Shan; Bai, Jun; Wang, Haibin

    2015-12-01

    The relative problems' research of chilled meat, thawed meat and spoiled meat discrimination by hyperspectral image technique were proposed, such the section of feature wavelengths, et al. First, based on 400 ~ 1000nm range hyperspectral image data of testing pork samples, by K-medoids clustering algorithm based on manifold distance, we select 30 important wavelengths from 753 wavelengths, and thus select 8 feature wavelengths (454.4, 477.5, 529.3, 546.8, 568.4, 580.3, 589.9 and 781.2nm) based on the discrimination value. Then 8 texture features of each image under 8 feature wavelengths were respectively extracted by two-dimensional Gabor wavelets transform as pork quality feature. Finally, we build a pork quality classification model using the fuzzy C-mean clustering algorithm. Through the experiment of extracting feature wavelengths, we found that although the hyperspectral images between adjacent bands have a strong linear correlation, they show a significant non-linear manifold relationship from the entire band. K-medoids clustering algorithm based on manifold distance used in this paper for selecting the characteristic wavelengths, which is more reasonable than traditional principal component analysis (PCA). Through the classification result, we conclude that hyperspectral imaging technology can distinguish among chilled meat, thawed meat and spoiled meat accurately.

  5. Characterization of burns using hyperspectral imaging technique - a preliminary study.

    PubMed

    Calin, Mihaela Antonina; Parasca, Sorin Viorel; Savastru, Roxana; Manea, Dragos

    2015-02-01

    Surgical burn treatment depends on accurate estimation of burn depth. Many methods have been used to asses burns, but none has gained wide acceptance. Hyperspectral imaging technique has recently entered the medical research field with encouraging results. In this paper we present a preliminary study (case presentation) that aims to point out the value of this optical method in burn wound characterization and to set up future lines of investigation. A hyperspectral image of a leg and foot with partial thickness burns was obtained in the fifth postburn day. The image was analyzed using linear spectral unmixing model as a tool for mapping the investigated areas. The article gives details on the mathematical bases of the interpretation model and correlations with clinical examination pointing out the advantages of hyperspectral imaging technique. While the results were encouraging, further more extended and better founded studies are being prepared before recognizing hyperspectral imaging technique as an applicable method of burn wound assessment. Copyright © 2014 Elsevier Ltd and ISBI. All rights reserved.

  6. Detecting red blotch disease in grape leaves using hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Mehrubeoglu, Mehrube; Orlebeck, Keith; Zemlan, Michael J.; Autran, Wesley

    2016-05-01

    Red blotch disease is a viral disease that affects grapevines. Symptoms appear as irregular blotches on grape leaves with pink and red veins on the underside of the leaves. Red blotch disease causes a reduction in the accumulation of sugar in grapevines affecting the quality of grapes and resulting in delayed harvest. Detecting and monitoring this disease early is important for grapevine management. This work focuses on the use of hyperspectral imaging for detection and mapping red blotch disease in grape leaves. Grape leaves with known red blotch disease have been imaged with a portable hyperspectral imaging system both on and off the vine to investigate the spectral signature of red blotch disease as well as to identify the diseased areas on the leaves. Modified reflectance calculated at spectral bands corresponding to 566 nm (green) and 628 nm (red), and modified reflectance ratios computed at two sets of bands (566 nm / 628 nm, 680 nm / 738 nm) were selected as effective features to differentiate red blotch from healthy-looking and dry leaf. These two modified reflectance and two ratios of modified reflectance values were then used to train the support vector machine classifier in a supervised learning scheme. Once the SVM classifier was defined, two-class classification was achieved for grape leaf hyperspectral images. Identification of the red blotch disease on grape leaves as well as mapping different stages of the disease using hyperspectral imaging are presented in this paper.

  7. Hyperspectral imaging system for whole corn ear surface inspection

    NASA Astrophysics Data System (ADS)

    Yao, Haibo; Kincaid, Russell; Hruska, Zuzana; Brown, Robert L.; Bhatnagar, Deepak; Cleveland, Thomas E.

    2013-05-01

    Aflatoxin is a mycotoxin produced mainly by Aspergillus flavus (A.flavus) and Aspergillus parasitiucus fungi that grow naturally in corn. Very serious health problems such as liver damage and lung cancer can result from exposure to high toxin levels in grain. Consequently, many countries have established strict guidelines for permissible levels in consumables. Conventional chemical-based analytical methods used to screen for aflatoxin such as thin-layer chromatography (TLC) and high performance liquid chromatography (HPLC) are time consuming, expensive, and require the destruction of samples as well as proper training for data interpretation. Thus, it has been a continuing effort within the research community to find a way to rapidly and non-destructively detect and possibly quantify aflatoxin contamination in corn. One of the more recent developments in this area is the use of spectral technology. Specifically, fluorescence hyperspectral imaging offers a potential rapid, and non-invasive method for contamination detection in corn infected with toxigenic A.flavus spores. The current hyperspectral image system is designed for scanning flat surfaces, which is suitable for imaging single or a group of corn kernels. In the case of a whole corn cob, it is preferred to be able to scan the circumference of the corn ear, appropriate for whole ear inspection. This paper discusses the development of a hyperspectral imaging system for whole corn ear imaging. The new instrument is based on a hyperspectral line scanner using a rotational stage to turn the corn ear.

  8. Hardware Implementation of Lossless Adaptive and Scalable Hyperspectral Data Compression for Space

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh; Keymeulen, Didier; Bakhshi, Alireza; Klimesh, Matthew

    2009-01-01

    On-board lossless hyperspectral data compression reduces data volume in order to meet NASA and DoD limited downlink capabilities. The technique also improves signature extraction, object recognition and feature classification capabilities by providing exact reconstructed data on constrained downlink resources. At JPL a novel, adaptive and predictive technique for lossless compression of hyperspectral data was recently developed. This technique uses an adaptive filtering method and achieves a combination of low complexity and compression effectiveness that far exceeds state-of-the-art techniques currently in use. The JPL-developed 'Fast Lossless' algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. It is of low computational complexity and thus well-suited for implementation in hardware. A modified form of the algorithm that is better suited for data from pushbroom instruments is generally appropriate for flight implementation. A scalable field programmable gate array (FPGA) hardware implementation was developed. The FPGA implementation achieves a throughput performance of 58 Msamples/sec, which can be increased to over 100 Msamples/sec in a parallel implementation that uses twice the hardware resources This paper describes the hardware implementation of the 'Modified Fast Lossless' compression algorithm on an FPGA. The FPGA implementation targets the current state-of-the-art FPGAs (Xilinx Virtex IV and V families) and compresses one sample every clock cycle to provide a fast and practical real-time solution for space applications.

  9. Hardware Implementation of Lossless Adaptive and Scalable Hyperspectral Data Compression for Space

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh; Keymeulen, Didier; Bakhshi, Alireza; Klimesh, Matthew

    2009-01-01

    On-board lossless hyperspectral data compression reduces data volume in order to meet NASA and DoD limited downlink capabilities. The technique also improves signature extraction, object recognition and feature classification capabilities by providing exact reconstructed data on constrained downlink resources. At JPL a novel, adaptive and predictive technique for lossless compression of hyperspectral data was recently developed. This technique uses an adaptive filtering method and achieves a combination of low complexity and compression effectiveness that far exceeds state-of-the-art techniques currently in use. The JPL-developed 'Fast Lossless' algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. It is of low computational complexity and thus well-suited for implementation in hardware. A modified form of the algorithm that is better suited for data from pushbroom instruments is generally appropriate for flight implementation. A scalable field programmable gate array (FPGA) hardware implementation was developed. The FPGA implementation achieves a throughput performance of 58 Msamples/sec, which can be increased to over 100 Msamples/sec in a parallel implementation that uses twice the hardware resources This paper describes the hardware implementation of the 'Modified Fast Lossless' compression algorithm on an FPGA. The FPGA implementation targets the current state-of-the-art FPGAs (Xilinx Virtex IV and V families) and compresses one sample every clock cycle to provide a fast and practical real-time solution for space applications.

  10. Image compression for functional imaging

    NASA Astrophysics Data System (ADS)

    Feng, Dagan D.; Li, Xianjin; Siu, Wan-Chi

    1997-04-01

    Function imaging has been playing an important role in modern biomedical research and clinical diagnosis, which provides human internal biochemical information previously not available. However, for a routine dynamic study with a typical medical function imaging system, such as positron emission tomography (PET), it is easily to acquire nearly 1000 images for just one patient in one study. Such a large number of images has given a considerable burden for computer image storage space, data processing and transmission time. In this paper, we present the theory and principles for the minimization of image frames in dynamic biomedical function imaging. We show that the minimum number of image frames required is just equal to the model identifiable parameters and that the quality of the physiological parameter estimation, based on these minimum number of image frames, can be controlled at a comparable level. As a result of our study, the image storage space required can be reduced by more than 80 percent.

  11. A Compressed Terahertz Imaging Method

    NASA Astrophysics Data System (ADS)

    Zhang, Man; Pan, Rui; Xiong, Wei; He, Ting; Shen, Jing-Ling

    2012-10-01

    A compressed terahertz imaging method using a terahertz time domain spectroscopy system (THz-TDSS) is suggested and demonstrated. In the method, a parallel THz wave with the beam diameter 4cm from a usual THz-TDSS is used and a square shaped 2D echelon is placed in front of an imaged object. We confirm both in simulation and in experiment that only one terahertz time domain spectrum is needed to image the object. The image information is obtained from the compressed THz signal by deconvolution signal processing, and therefore the whole imaging time is greatly reduced in comparison with some other pulsed THz imaging methods. The present method will hopefully be used in real-time imaging.

  12. Methodology for hyperspectral image classification using novel neural network

    SciTech Connect

    Subramanian, S., Gat, N., Sheffield, M.,; Barhen, J.; Toomarian, N.

    1997-04-01

    A novel feed forward neural network is used to classify hyperspectral data from the AVIRIS sector. The network applies an alternating direction singular value decomposition technique to achieve rapid training times (few seconds per class). Very few samples (10-12) are required for training. 100% accurate classification is obtained using test data sets. The methodology combines this rapid training neural network together with data reduction and maximal feature separation techniques such as principal component analysis and simultaneous diagonalization of covariance matrices, for rapid and accurate classification of large hyperspectral images. The results are compared to those of standard statistical classifiers. 21 refs., 3 figs., 5 tabs.

  13. Emissivity retrieval from indoor hyperspectral imaging of mineral grains

    NASA Astrophysics Data System (ADS)

    Yousefi, Bardia; Sojasi, Saeed; Ibarra Castanedo, Clemente; Beaudoin, Georges; Huot, François; Maldague, Xavier P. V.; Chamberland, Martin; Lalonde, Erik

    2016-05-01

    The proposed approach addresses the problem of retrieving the emissivity of hyperspectral data in the spectroscopic imageries from indoor experiments. This methodology was tested on experimental data that have been recorded with hyperspectral images working in visible/near infrared and long-wave infrared bands. The proposed technique provides a framework for computing down-welling spectral radiance applying non-negative matrix factorization (NMF) analysis. It provides the necessary means for the non-uniform correction of active thermographical experiments. The obtained results indicate promising accuracy. In addition, the application of the proposed technique is not limited to non-uniform heating spectroscopy but to uniform spectroscopy as well.

  14. Satellite image compression using wavelet

    NASA Astrophysics Data System (ADS)

    Santoso, Alb. Joko; Soesianto, F.; Dwiandiyanto, B. Yudi

    2010-02-01

    Image data is a combination of information and redundancies, the information is part of the data be protected because it contains the meaning and designation data. Meanwhile, the redundancies are part of data that can be reduced, compressed, or eliminated. Problems that arise are related to the nature of image data that spends a lot of memory. In this paper will compare 31 wavelet function by looking at its impact on PSNR, compression ratio, and bits per pixel (bpp) and the influence of decomposition level of PSNR and compression ratio. Based on testing performed, Haar wavelet has the advantage that is obtained PSNR is relatively higher compared with other wavelets. Compression ratio is relatively better than other types of wavelets. Bits per pixel is relatively better than other types of wavelet.

  15. Imaging of venous compression syndromes

    PubMed Central

    Ganguli, Suvranu; Ghoshhajra, Brian B.; Gupta, Rajiv; Prabhakar, Anand M.

    2016-01-01

    Venous compression syndromes are a unique group of disorders characterized by anatomical extrinsic venous compression, typically in young and otherwise healthy individuals. While uncommon, they may cause serious complications including pain, swelling, deep venous thrombosis (DVT), pulmonary embolism, and post-thrombotic syndrome. The major disease entities are May-Thurner syndrome (MTS), variant iliac vein compression syndrome (IVCS), venous thoracic outlet syndrome (VTOS)/Paget-Schroetter syndrome, nutcracker syndrome (NCS), and popliteal venous compression (PVC). In this article, we review the key clinical features, multimodality imaging findings, and treatment options of these disorders. Emphasis is placed on the growing role of noninvasive imaging options such as magnetic resonance venography (MRV) in facilitating early and accurate diagnosis and tailored intervention. PMID:28123973

  16. Recent Advances in Techniques for Hyperspectral Image Processing

    NASA Technical Reports Server (NTRS)

    Plaza, Antonio; Benediktsson, Jon Atli; Boardman, Joseph W.; Brazile, Jason; Bruzzone, Lorenzo; Camps-Valls, Gustavo; Chanussot, Jocelyn; Fauvel, Mathieu; Gamba, Paolo; Gualtieri, Anthony; Marconcini, Mattia; Tilton, James C.; Trianni, Giovanna

    2009-01-01

    Imaging spectroscopy, also known as hyperspectral imaging, has been transformed in less than 30 years from being a sparse research tool into a commodity product available to a broad user community. Currently, there is a need for standardized data processing techniques able to take into account the special properties of hyperspectral data. In this paper, we provide a seminal view on recent advances in techniques for hyperspectral image processing. Our main focus is on the design of techniques able to deal with the highdimensional nature of the data, and to integrate the spatial and spectral information. Performance of the discussed techniques is evaluated in different analysis scenarios. To satisfy time-critical constraints in specific applications, we also develop efficient parallel implementations of some of the discussed algorithms. Combined, these parts provide an excellent snapshot of the state-of-the-art in those areas, and offer a thoughtful perspective on future potentials and emerging challenges in the design of robust hyperspectral imaging algorithms

  17. Portable hyperspectral imager for assessment of skin disorders: preliminary measurements

    NASA Astrophysics Data System (ADS)

    Beach, James M.; Lanoue, Mark A.; Brabham, Kori; Khoobehi, Bahram

    2005-04-01

    Oxygenation of the facial skin was evaluated in rosacea using a hyperspectral camera. A portable imaging system utilizing crossed-polarization optics for illumination and recording is described. Relative oxygen saturation was determined from rosacea features and compared with normal skin. Saturation maps and light absorption spectra showed a significant increase in the oxygen saturation of the blood in rosacea-affected skin.

  18. Detection of lettuce discoloration using hyperspectral reflectance imaging

    USDA-ARS?s Scientific Manuscript database

    Rapid visible/near-infrared (VNIR) hyperspectral imaging methods, employing both a single waveband algorithm and multi-spectral algorithms, were developed in order to classify the discoloration of lettuce. Reflectance spectra for sound and discolored lettuce surfaces were extracted from hyperspectra...

  19. Recent Advances in Techniques for Hyperspectral Image Processing

    NASA Technical Reports Server (NTRS)

    Plaza, Antonio; Benediktsson, Jon Atli; Boardman, Joseph W.; Brazile, Jason; Bruzzone, Lorenzo; Camps-Valls, Gustavo; Chanussot, Jocelyn; Fauvel, Mathieu; Gamba, Paolo; Gualtieri, Anthony; hide

    2009-01-01

    Imaging spectroscopy, also known as hyperspectral imaging, has been transformed in less than 30 years from being a sparse research tool into a commodity product available to a broad user community. Currently, there is a need for standardized data processing techniques able to take into account the special properties of hyperspectral data. In this paper, we provide a seminal view on recent advances in techniques for hyperspectral image processing. Our main focus is on the design of techniques able to deal with the highdimensional nature of the data, and to integrate the spatial and spectral information. Performance of the discussed techniques is evaluated in different analysis scenarios. To satisfy time-critical constraints in specific applications, we also develop efficient parallel implementations of some of the discussed algorithms. Combined, these parts provide an excellent snapshot of the state-of-the-art in those areas, and offer a thoughtful perspective on future potentials and emerging challenges in the design of robust hyperspectral imaging algorithms

  20. Hyperspectral Imaging for Detecting Pathogens Grown on Agar Plates

    USDA-ARS?s Scientific Manuscript database

    This paper is concerned with the development of a hyperspectral imaging technique for detecting and identifying one of the most common foodborne pathogens, Campylobacter. Direct plating using agars is an effective tool for laboratory tests and analyses of microorganisms. The morphology (size, growth...

  1. Visible Hyperspectral Imaging for Standoff Detection of Explosives on Surfaces

    SciTech Connect

    Bernacki, Bruce E.; Blake, Thomas A.; Mendoza, Albert; Johnson, Timothy J.

    2010-11-01

    There is an ever-increasing need to be able to detect the presence of explosives, preferably from standoff distances. This paper presents an application of visible hyperspectral imaging using anomaly, polarization and spectral identification approaches for the standoff detection (13 meters) of nitroaromatic explosives on realistic painted surfaces based upon the colorimetric differences between tetryl and TNT which are enhanced by solar irradiation.

  2. Hyperspectral Reflectance Imaging for Detecting a Foodborne Pathogen: Campylobacter

    USDA-ARS?s Scientific Manuscript database

    This paper is concerned with the development of a hyperspectral reflectance imaging technique for detecting and identifying one of the most common foodborne pathogens, Campylobacter. Direct plating using agars is an effective tool for laboratory tests and analyses of microorganisms. The morphology (...

  3. Classification of fecal contamination on leafy greens by hyperspectral imaging

    USDA-ARS?s Scientific Manuscript database

    A hyperspectral fluorescence imaging system was developed and used to obtain several two-waveband spectral ratios on leafy green vegetables, represented by romaine lettuce and baby spinach in this study. The ratios were analyzed to determine the proper one for detecting bovine fecal contamination on...

  4. Classification of Fecal Contamination on Leafy Greens by Hyperspectral Imaging

    USDA-ARS?s Scientific Manuscript database

    A hyperspectral fluorescence imaging system was developed and used to obtain several two-waveband spectral ratios on leafy green vegetables, represented by romaine lettuce and baby spinach in this study. The ratios were analyzed to determine the proper one for detecting bovine fecal contamination on...

  5. Classification of visible and infrared hyperspectral images based on image segmentation and edge-preserving filtering

    NASA Astrophysics Data System (ADS)

    Cui, Binge; Ma, Xiudan; Xie, Xiaoyun; Ren, Guangbo; Ma, Yi

    2017-03-01

    The classification of hyperspectral images with a few labeled samples is a major challenge which is difficult to meet unless some spatial characteristics can be exploited. In this study, we proposed a novel spectral-spatial hyperspectral image classification method that exploited spatial autocorrelation of hyperspectral images. First, image segmentation is performed on the hyperspectral image to assign each pixel to a homogeneous region. Second, the visible and infrared bands of hyperspectral image are partitioned into multiple subsets of adjacent bands, and each subset is merged into one band. Recursive edge-preserving filtering is performed on each merged band which utilizes the spectral information of neighborhood pixels. Third, the resulting spectral and spatial feature band set is classified using the SVM classifier. Finally, bilateral filtering is performed to remove "salt-and-pepper" noise in the classification result. To preserve the spatial structure of hyperspectral image, edge-preserving filtering is applied independently before and after the classification process. Experimental results on different hyperspectral images prove that the proposed spectral-spatial classification approach is robust and offers more classification accuracy than state-of-the-art methods when the number of labeled samples is small.

  6. Using independent component analysis for material estimation in hyperspectral images.

    PubMed

    Kuan, Chia-Yun; Healey, Glenn

    2004-06-01

    We develop a method for automated material estimation in hyperspectral images. The method models a hyperspectral pixel as a linear mixture of unknown materials. The method is particularly useful for applications in which material regions in a scene are smaller than one pixel. In contrast to many material estimation methods, the new method uses the statistics of large numbers of pixels rather than attempting to identify a small number of the purest pixels. The method is based on maximizing the independence of material abundances at each pixel. We show how independent component analysis algorithms can be adapted for use with this problem. We demonstrate properties of the method by application to airborne hyperspectral data.

  7. Hyperspectral imaging in medicine: image pre-processing problems and solutions in Matlab.

    PubMed

    Koprowski, Robert

    2015-11-01

    The paper presents problems and solutions related to hyperspectral image pre-processing. New methods of preliminary image analysis are proposed. The paper shows problems occurring in Matlab when trying to analyse this type of images. Moreover, new methods are discussed which provide the source code in Matlab that can be used in practice without any licensing restrictions. The proposed application and sample result of hyperspectral image analysis. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. [Design of hyperspectral imaging system based on LCTF].

    PubMed

    Zhang, Dong-ying; Hong, Jin; Tang, Wei-ping; Yang, Wei-feng; Luo, Jun; Qiao, Yan-li; Zhang, Xie

    2008-10-01

    A new compact lightweight imaging system for hyperspectral imaging is described. The system can be thought of as the substitute for traditional mechanical filter-wheel sensor. The system is based on different techniques. It uses an electronic controlled LCTF(liquid crystal tunable filter) which provided rapid and vibrationless selection of any wavelength in the visible to IR range. The imaging system consisted of an optic lens, a CRI VariSpec LCTF and a Dalsa 1M30 camera. First the outline of this system setup is presented, then the optics designed is introduced, next the working principle of LCTF is described in details. A field experiment with the imaging system loaded on an airship was carried out and collected hyperspectral solid image. The images obtained had higher spectral and spatial resolution. Some parts of the 540-600 nm components of the 16-band image cube were also shown. Finally, the data acquired were rough processed to get reflection spectrum(from 420 to 720 nm) of three targets. It is concluded that the experiment has proved that the imaging system is effective in obtaining hyperspectral data. The image captured by the system can be applied to spectral estimation, spectra based classification and spectral based analysis.

  9. Hyperspectral imaging with stimulated Raman scattering by chirped femtosecond lasers.

    PubMed

    Fu, Dan; Holtom, Gary; Freudiger, Christian; Zhang, Xu; Xie, Xiaoliang Sunney

    2013-04-25

    Raman microscopy is a quantitative, label-free, and noninvasive optical imaging technique for studying inhomogeneous systems. However, the feebleness of Raman scattering significantly limits the use of Raman microscopy to low time resolutions and primarily static samples. Recent developments in narrowband stimulated Raman scattering (SRS) microscopy have significantly increased the acquisition speed of Raman based label-free imaging by a few orders of magnitude, at the expense of reduced spectroscopic information. On the basis of a spectral focusing approach, we present a fast SRS hyperspectral imaging system using chirped femtosecond lasers to achieve rapid Raman spectra acquisition while retaining the full speed and image quality of narrowband SRS imaging. We demonstrate that quantitative concentration determination of cholesterol in the presence of interfering chemical species can be achieved with sensitivity down to 4 mM. For imaging purposes, hyperspectral imaging data in the C-H stretching region is obtained within a minute. We show that mammalian cell SRS hyperspectral imaging reveals the spatially inhomogeneous distribution of saturated lipids, unsaturated lipids, cholesterol, and protein. The combination of fast spectroscopy and label-free chemical imaging will enable new applications in studying biological systems and material systems.

  10. A programmable image compression system

    NASA Technical Reports Server (NTRS)

    Farrelle, Paul M.

    1989-01-01

    A programmable image compression system which has the necessary flexibility to address diverse imaging needs is described. It can compress and expand single frame video images (monochrome or color) as well as documents and graphics (black and white or color) for archival or transmission applications. Through software control, the compression mode can be set for lossless or controlled quality coding; the image size and bit depth can be varied; and the image source and destination devices can be readily changed. Despite the large combination of image data types, image sources, and algorithms, the system provides a simple consistent interface to the programmer. This system (OPTIPAC) is based on the TITMS320C25 digital signal processing (DSP) chip and has been implemented as a co-processor board for an IBM PC-AT compatible computer. The underlying philosophy can readily be applied to different hardware platforms. By using multiple DSP chips or incorporating algorithm specific chips, the compression and expansion times can be significantly reduced to meet performance requirements.

  11. Tongue fissure extraction and classification using hyperspectral imaging technology.

    PubMed

    Li, Qingli; Wang, Yiting; Liu, Hongying; Sun, Zhen; Liu, Zhi

    2010-04-10

    Tongue fissures, an important feature on the tongue surface, may be pathologically related to some diseases. Most existing tongue fissure extraction methods use tongue images captured by traditional charge coupled device cameras. However, these conventional methods cannot be used for an accurate analysis of the tongue surface due to limited information from the images. To solve this, a hyperspectral tongue imager is used to capture tongue images instead of a digital camera. New algorithms for automatic tongue fissure extraction and classification, based on hyperspectral images, are presented. Both spectral and spatial information of the tongue surface is used to segment the tongue body and extract tongue fissures. Then a classification algorithm based on a hidden Markov model is used to classify tongue fissures into 12 typical categories. Results of the experiment show that the new method has good performance in terms of the classification rates of correctness.

  12. "Multimodal Contrast" from the Multivariate Analysis of Hyperspectral CARS Images

    NASA Astrophysics Data System (ADS)

    Tabarangao, Joel T.

    The typical contrast mechanism employed in multimodal CARS microscopy involves the use of other nonlinear imaging modalities such as two-photon excitation fluorescence (TPEF) microscopy and second harmonic generation (SHG) microscopy to produce a molecule-specific pseudocolor image. In this work, I explore the use of unsupervised multivariate statistical analysis tools such as Principal Component Analysis (PCA) and Vertex Component Analysis (VCA) to provide better contrast using the hyperspectral CARS data alone. Using simulated CARS images, I investigate the effects of the quadratic dependence of CARS signal on concentration on the pixel clustering and classification and I find that a normalization step is necessary to improve pixel color assignment. Using an atherosclerotic rabbit aorta test image, I show that the VCA algorithm provides pseudocolor contrast that is comparable to multimodal imaging, thus showing that much of the information gleaned from a multimodal approach can be sufficiently extracted from the CARS hyperspectral stack itself.

  13. Automatic Denoising and Unmixing in Hyperspectral Image Processing

    NASA Astrophysics Data System (ADS)

    Peng, Honghong

    This thesis addresses two important aspects in hyperspectral image processing: automatic hyperspectral image denoising and unmixing. The first part of this thesis is devoted to a novel automatic optimized vector bilateral filter denoising algorithm, while the remainder concerns nonnegative matrix factorization with deterministic annealing for unsupervised unmixing in remote sensing hyperspectral images. The need for automatic hyperspectral image processing has been promoted by the development of potent hyperspectral systems, with hundreds of narrow contiguous bands, spanning the visible to the long wave infrared range of the electromagnetic spectrum. Due to the large volume of raw data generated by such sensors, automatic processing in the hyperspectral images processing chain is preferred to minimize human workload and achieve optimal result. Two of the mostly researched processing for such automatic effort are: hyperspectral image denoising, which is an important preprocessing step for almost all remote sensing tasks, and unsupervised unmixing, which decomposes the pixel spectra into a collection of endmember spectral signatures and their corresponding abundance fractions. Two new methodologies are introduced in this thesis to tackle the automatic processing problems described above. Vector bilateral filtering has been shown to provide good tradeoff between noise removal and edge degradation when applied to multispectral/hyperspectral image denoising. It has also been demonstrated to provide dynamic range enhancement of bands that have impaired signal to noise ratios. Typical vector bilateral filtering usage does not employ parameters that have been determined to satisfy optimality criteria. This thesis also introduces an approach for selection of the parameters of a vector bilateral filter through an optimization procedure rather than by ad hoc means. The approach is based on posing the filtering problem as one of nonlinear estimation and minimizing the Stein

  14. Identification of inflammation sites in arthritic joints using hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Paluchowski, Lukasz A.; Milanic, Matija; Bjorgan, Asgeir; Grandaunet, Berit; Dhainaut, Alvilde; Hoff, Mari; Randeberg, Lise L.

    2014-03-01

    Inflammatory arthritic diseases have prevalence between 2 and 3% and may lead to joint destruction and deformation resulting in a loss of function. Patient's quality of life is often severely affected as the disease attacks hands and finger joints. Pathology involved in arthritis includes angiogenesis, hyper-vascularization, hyper-metabolism and relative hypoxia. We have employed hyperspectral imaging to study the hemodynamics of affected- and non-affected joints and tissue. Two hyperspectral, push-broom cameras were used (VNIR-1600, SWIR-320i, Norsk Elektro Optikk AS, Norway). Optical spectra (400nm - 1700nm) of high spectral resolution were collected from 15 patients with visible symptoms of arthritic rheumatic diseases in at least one joint. The control group consisted of 10 healthy individuals. Concentrations of dominant chromophores were calculated based on analytical calculations of light transport in tissue. Image processing was used to analyze hyperspectral data and retrieve information, e.g. blood concentration and tissue oxygenation maps. The obtained results indicate that hyperspectral imaging can be used to quantify changes within affected joints and surrounding tissue. Further improvement of this method will have positive impact on diagnosis of arthritic joints at an early stage. Moreover it will enable development of fast, noninvasive and noncontact diagnostic tool of arthritic joints

  15. Assessment of hyperspectral imaging system for colour measurement

    NASA Astrophysics Data System (ADS)

    Chlebda, Damian K.; Rogulska, Anna; Łojewski, Tomasz

    2017-10-01

    A novel technique of reflective spectroscopy, hyperspectral imaging (HSI), was used to develop a methodology for colour measurement, which is very important in the field of art conservation - especially in the analysis of documents. The major focus of this work is an examination of the repeatability and reproducibility of colour parameters calculated from the hyperspectral data. The study was performed with commercial colour standards and pen ink lines, corresponding to large and small-scale colour areas, respectively. In some cases, the error of parameter determination indicated significant differences between the examined sample sets, which may be attributed to the low population of pixels from which the colour data were obtained. Our study allowed the development of an optimal hyperspectral image acquisition method for applications requiring accurate determination of the object's spectral characteristics. Besides determining the proper measurement procedure and the colour accuracy of the HSI, our study is also used to test this method for colour change monitoring of a real-life sample - a document treated with low-temperature plasma as a cleaning agent. The results proved that, by using hyperspectral imaging, colour change can be precisely determined and monitored within a selected area on the object. The application of HSI presented in our study was found to be an important alternative to conventional colorimeters.

  16. Hyperspectral image reconstruction using RGB color for foodborne pathogen detection on agar plates

    USDA-ARS?s Scientific Manuscript database

    This paper reports the latest development of a color vision technique for detecting colonies of foodborne pathogens grown on agar plates with a hyperspectral image classification model that was developed using full hyperspectral data. The hyperspectral classification model depended on reflectance sp...

  17. Analysis of hyperspectral scattering images using a moment method for apple firmness prediction

    USDA-ARS?s Scientific Manuscript database

    This article reports on using a moment method to extract features from the hyperspectral scattering profiles for apple fruit firmness prediction. Hyperspectral scattering images between 500 nm and 1000 nm were acquired online, using a hyperspectral scattering system, for ‘Golden Delicious’, ’Jonagol...

  18. Hyperspectral imaging for non-contact analysis of forensic traces.

    PubMed

    Edelman, G J; Gaston, E; van Leeuwen, T G; Cullen, P J; Aalders, M C G

    2012-11-30

    Hyperspectral imaging (HSI) integrates conventional imaging and spectroscopy, to obtain both spatial and spectral information from a specimen. This technique enables investigators to analyze the chemical composition of traces and simultaneously visualize their spatial distribution. HSI offers significant potential for the detection, visualization, identification and age estimation of forensic traces. The rapid, non-destructive and non-contact features of HSI mark its suitability as an analytical tool for forensic science. This paper provides an overview of the principles, instrumentation and analytical techniques involved in hyperspectral imaging. We describe recent advances in HSI technology motivating forensic science applications, e.g. the development of portable and fast image acquisition systems. Reported forensic science applications are reviewed. Challenges are addressed, such as the analysis of traces on backgrounds encountered in casework, concluded by a summary of possible future applications.

  19. Towards real-time medical diagnostics using hyperspectral imaging technology

    NASA Astrophysics Data System (ADS)

    Bjorgan, Asgeir; Randeberg, Lise L.

    2015-07-01

    Hyperspectral imaging provides non-contact, high resolution spectral images which has a substantial diagnostic potential. This can be used for e.g. diagnosis and early detection of arthritis in finger joints. Processing speed is currently a limitation for clinical use of the technique. A real-time system for analysis and visualization using GPU processing and threaded CPU processing is presented. Images showing blood oxygenation, blood volume fraction and vessel enhanced images are among the data calculated in real-time. This study shows the potential of real-time processing in this context. A combination of the processing modules will be used in detection of arthritic finger joints from hyperspectral reflectance and transmittance data.

  20. Hyperspectral vibrational photoacoustic imaging of lipids and collagen

    NASA Astrophysics Data System (ADS)

    Wang, Pu; Wang, Ping; Wang, Han-Wei; Cheng, Ji-Xin

    2012-02-01

    The recently developed vibrational photoacoustic (VPA) microscopy allows bond-selective imaging of deep tissues by taking advantage of intrinsic contrast from harmonic vibration of C-H bonds. Due to the spectral similarity of molecules in the overtone vibration region, the compositional information is not available from VPA images acquired by single wavelength excitation. Here we demonstrate that lipids and collagen, two critical markers in many kinds of diseases, can be distinguished by hyperspectral VPA imaging. A phantom consisted of rat tail tendon (collagen) and fat tissue (lipids) was constructed. Wavelengths between 1650 and 1850 nm were scanned to excite the first overtone/combination vibration of C-H bond. B-scan hyperspectral VPA images, in which each pixel contains a spectrum, was analyzed by a Multivariate Curve Resolution - Alternating Least Squares (MCR-ALS) algorism to recover the spatial distribution of two chemical components in the phantom.

  1. A hyperspectral image analysis workbench for environmental science applications

    SciTech Connect

    Christiansen, J.H.; Zawada, D.G.; Simunich, K.L.; Slater, J.C.

    1992-10-01

    A significant challenge to the information sciences is to provide more powerful and accessible means to exploit the enormous wealth of data available from high-resolution imaging spectrometry, or ``hyperspectral`` imagery, for analysis, for mapping purposes, and for input to environmental modeling applications. As an initial response to this challenge, Argonne`s Advanced Computer Applications Center has developed a workstation-based prototype software workbench which employs Al techniques and other advanced approaches to deduce surface characteristics and extract features from the hyperspectral images. Among its current capabilities, the prototype system can classify pixels by abstract surface type. The classification process employs neural network analysis of inputs which include pixel spectra and a variety of processed image metrics, including image ``texture spectra`` derived from fractal signatures computed for subimage tiles at each wavelength.

  2. A hyperspectral image analysis workbench for environmental science applications

    SciTech Connect

    Christiansen, J.H.; Zawada, D.G.; Simunich, K.L.; Slater, J.C.

    1992-01-01

    A significant challenge to the information sciences is to provide more powerful and accessible means to exploit the enormous wealth of data available from high-resolution imaging spectrometry, or hyperspectral'' imagery, for analysis, for mapping purposes, and for input to environmental modeling applications. As an initial response to this challenge, Argonne's Advanced Computer Applications Center has developed a workstation-based prototype software workbench which employs Al techniques and other advanced approaches to deduce surface characteristics and extract features from the hyperspectral images. Among its current capabilities, the prototype system can classify pixels by abstract surface type. The classification process employs neural network analysis of inputs which include pixel spectra and a variety of processed image metrics, including image texture spectra'' derived from fractal signatures computed for subimage tiles at each wavelength.

  3. Camouflage target detection via hyperspectral imaging plus information divergence measurement

    NASA Astrophysics Data System (ADS)

    Chen, Yuheng; Chen, Xinhua; Zhou, Jiankang; Ji, Yiqun; Shen, Weimin

    2016-01-01

    Target detection is one of most important applications in remote sensing. Nowadays accurate camouflage target distinction is often resorted to spectral imaging technique due to its high-resolution spectral/spatial information acquisition ability as well as plenty of data processing methods. In this paper, hyper-spectral imaging technique together with spectral information divergence measure method is used to solve camouflage target detection problem. A self-developed visual-band hyper-spectral imaging device is adopted to collect data cubes of certain experimental scene before spectral information divergences are worked out so as to discriminate target camouflage and anomaly. Full-band information divergences are measured to evaluate target detection effect visually and quantitatively. Information divergence measurement is proved to be a low-cost and effective tool for target detection task and can be further developed to other target detection applications beyond spectral imaging technique.

  4. Multispectral and hyperspectral imaging with AOTF for object recognition

    NASA Astrophysics Data System (ADS)

    Gupta, Neelam; Dahmani, Rachid

    1999-01-01

    Acousto-optic tunable-filter (AOTF) technology has been used in the design of a no-moving parts, compact, lightweight, field portable, automated, adaptive spectral imaging system when combined with a high sensitivity imaging detector array. Such a system could detect spectral signatures of targets and/or background, which contain polarization information and can be digitally processed by a variety of algorithms. At the Army Research Laboratory, we have developed and used a number of AOTF imaging systems and are also carrying out the development of such imagers at longer wavelengths. We have carried out hyperspectral and multispectral imaging using AOTF systems covering the spectral range from the visible to mid-IR. One of the imager uses a two-cascaded collinear-architecture AOTF cell in the visible-to-near-IR range with a digital Si charge-coupled device camera as the detector. The images obtained with this system showed no color blurring or image shift due to the angular deviation of different colors as a result of diffraction, and the digital images are stored and processed with great ease. The spatial resolution of the filter was evaluated by means of the lines of a target chart. We have also obtained and processed images from another noncollinear visible-to-near-IR AOTF imager with a digital camera, and used hyperspectral image processing software to enhance object recognition in cluttered background. We are presently working on a mid-IR AOTF imaging system that uses a high- performance InSb focal plane array and image acquisition and processing software. We describe our hyperspectral imaging program and present results from our imaging experiments.

  5. Hyperspectral image visualization using t-distributed stochastic neighbor embedding

    NASA Astrophysics Data System (ADS)

    Zhang, Biyin; Yu, Xin

    2015-12-01

    Hyperspectral image visualization reduces high-dimensional spectral bands to three color channels, which are sought in order to explain well the nonlinear data characteristics that are hidden in the high-dimensional spectral bands. Despite the surge in the linear visualization techniques, the development of nonlinear visualization has been limited. The paper presents a new technique for visualization of hyperspectral image using t-distributed stochastic neighbor embedding, called VHI-tSNE, which learns a nonlinear mapping between the high-dimensional spectral space and the three-dimensional color space. VHI-tSNE transforms hyperspectral data into bilateral probability similarities, and employs a heavy-tailed distribution in three-dimensional color space to alleviate the crowding problem and optimization problem in SNE technique. We evaluate the performance of VHI-tSNE in experiments on several hyperspectral imageries, in which we compare it to the performance of other state-of-art techniques. The results of experiments demonstrated the strength of the proposed technique.

  6. Hyperspectral imaging of bruises in the SWIR spectral region

    NASA Astrophysics Data System (ADS)

    Randeberg, Lise L.; Hernandez-Palacios, Julio

    2012-02-01

    Optical diagnostics of bruised skin might provide important information for characterization and age determination of such injuries. Hyperspectral imaging is one of the optical techniques that have been employed for bruise characterization. This technique combines high spatial and spectral resolution and makes it possible to study both chromophore signatures and -distributions in an injury. Imaging and spectroscopy in the visible spectral range have resulted in increased knowledge about skin bruises. So far the SWIR region has not been explored for this application. The main objective of the current study was to characterize bruises in the SWIR wavelength range. Hyperspectral images in the SWIR (950-2500nm ) and VNIR (400-850nm) spectral range were collected from 3 adult volunteers with bruises of known age. Data were collected over a period of 8 days. The data were analyzed using spectroscopic techniques and statistical image analysis. Preliminary results from the pilot study indicate that SWIR hyperspectral imaging might be an important supplement to imaging in the visible part of the spectrum. The technique emphasizes local edema and gives a possibility to visualize features that cannot easily be seen in the visible part of the spectrum.

  7. Hyperspectral laser-induced autofluorescence imaging of dental caries

    NASA Astrophysics Data System (ADS)

    Bürmen, Miran; Fidler, Aleš; Pernuš, Franjo; Likar, Boštjan

    2012-01-01

    Dental caries is a disease characterized by demineralization of enamel crystals leading to the penetration of bacteria into the dentine and pulp. Early detection of enamel demineralization resulting in increased enamel porosity, commonly known as white spots, is a difficult diagnostic task. Laser induced autofluorescence was shown to be a useful method for early detection of demineralization. The existing studies involved either a single point spectroscopic measurements or imaging at a single spectral band. In the case of spectroscopic measurements, very little or no spatial information is acquired and the measured autofluorescence signal strongly depends on the position and orientation of the probe. On the other hand, single-band spectral imaging can be substantially affected by local spectral artefacts. Such effects can significantly interfere with automated methods for detection of early caries lesions. In contrast, hyperspectral imaging effectively combines the spatial information of imaging methods with the spectral information of spectroscopic methods providing excellent basis for development of robust and reliable algorithms for automated classification and analysis of hard dental tissues. In this paper, we employ 405 nm laser excitation of natural caries lesions. The fluorescence signal is acquired by a state-of-the-art hyperspectral imaging system consisting of a high-resolution acousto-optic tunable filter (AOTF) and a highly sensitive Scientific CMOS camera in the spectral range from 550 nm to 800 nm. The results are compared to the contrast obtained by near-infrared hyperspectral imaging technique employed in the existing studies on early detection of dental caries.

  8. Detection of Lettuce Discoloration Using Hyperspectral Reflectance Imaging

    PubMed Central

    Mo, Changyeun; Kim, Giyoung; Lim, Jongguk; Kim, Moon S.; Cho, Hyunjeong; Cho, Byoung-Kwan

    2015-01-01

    Rapid visible/near-infrared (VNIR) hyperspectral imaging methods, employing both a single waveband algorithm and multi-spectral algorithms, were developed in order to discrimination between sound and discolored lettuce. Reflectance spectra for sound and discolored lettuce surfaces were extracted from hyperspectral reflectance images obtained in the 400–1000 nm wavelength range. The optimal wavebands for discriminating between discolored and sound lettuce surfaces were determined using one-way analysis of variance. Multi-spectral imaging algorithms developed using ratio and subtraction functions resulted in enhanced classification accuracy of above 99.9% for discolored and sound areas on both adaxial and abaxial lettuce surfaces. Ratio imaging (RI) and subtraction imaging (SI) algorithms at wavelengths of 552/701 nm and 557–701 nm, respectively, exhibited better classification performances compared to results obtained for all possible two-waveband combinations. These results suggest that hyperspectral reflectance imaging techniques can potentially be used to discriminate between discolored and sound fresh-cut lettuce. PMID:26610510

  9. Detection of Lettuce Discoloration Using Hyperspectral Reflectance Imaging.

    PubMed

    Mo, Changyeun; Kim, Giyoung; Lim, Jongguk; Kim, Moon S; Cho, Hyunjeong; Cho, Byoung-Kwan

    2015-11-20

    Rapid visible/near-infrared (VNIR) hyperspectral imaging methods, employing both a single waveband algorithm and multi-spectral algorithms, were developed in order to discrimination between sound and discolored lettuce. Reflectance spectra for sound and discolored lettuce surfaces were extracted from hyperspectral reflectance images obtained in the 400-1000 nm wavelength range. The optimal wavebands for discriminating between discolored and sound lettuce surfaces were determined using one-way analysis of variance. Multi-spectral imaging algorithms developed using ratio and subtraction functions resulted in enhanced classification accuracy of above 99.9% for discolored and sound areas on both adaxial and abaxial lettuce surfaces. Ratio imaging (RI) and subtraction imaging (SI) algorithms at wavelengths of 552/701 nm and 557-701 nm, respectively, exhibited better classification performances compared to results obtained for all possible two-waveband combinations. These results suggest that hyperspectral reflectance imaging techniques can potentially be used to discriminate between discolored and sound fresh-cut lettuce.

  10. Lesion detection in magnetic resonance brain images by hyperspectral imaging algorithms

    NASA Astrophysics Data System (ADS)

    Xue, Bai; Wang, Lin; Li, Hsiao-Chi; Chen, Hsian Min; Chang, Chein-I.

    2016-05-01

    Magnetic Resonance (MR) images can be considered as multispectral images so that MR imaging can be processed by multispectral imaging techniques such as maximum likelihood classification. Unfortunately, most multispectral imaging techniques are not particularly designed for target detection. On the other hand, hyperspectral imaging is primarily developed to address subpixel detection, mixed pixel classification for which multispectral imaging is generally not effective. This paper takes advantages of hyperspectral imaging techniques to develop target detection algorithms to find lesions in MR brain images. Since MR images are collected by only three image sequences, T1, T2 and PD, if a hyperspectral imaging technique is used to process MR images it suffers from the issue of insufficient dimensionality. To address this issue, two approaches to nonlinear dimensionality expansion are proposed, nonlinear correlation expansion and nonlinear band ratio expansion. Once dimensionality is expanded hyperspectral imaging algorithms are readily applied. The hyperspectral detection algorithm to be investigated for lesion detection in MR brain is the well-known subpixel target detection algorithm, called Constrained Energy Minimization (CEM). In order to demonstrate the effectiveness of proposed CEM in lesion detection, synthetic images provided by BrainWeb are used for experiments.

  11. Classification of corn kernels contaminated with aflatoxins using fluorescence and reflectance hyperspectral images analysis

    NASA Astrophysics Data System (ADS)

    Zhu, Fengle; Yao, Haibo; Hruska, Zuzana; Kincaid, Russell; Brown, Robert; Bhatnagar, Deepak; Cleveland, Thomas

    2015-05-01

    Aflatoxins are secondary metabolites produced by certain fungal species of the Aspergillus genus. Aflatoxin contamination remains a problem in agricultural products due to its toxic and carcinogenic properties. Conventional chemical methods for aflatoxin detection are time-consuming and destructive. This study employed fluorescence and reflectance visible near-infrared (VNIR) hyperspectral images to classify aflatoxin contaminated corn kernels rapidly and non-destructively. Corn ears were artificially inoculated in the field with toxigenic A. flavus spores at the early dough stage of kernel development. After harvest, a total of 300 kernels were collected from the inoculated ears. Fluorescence hyperspectral imagery with UV excitation and reflectance hyperspectral imagery with halogen illumination were acquired on both endosperm and germ sides of kernels. All kernels were then subjected to chemical analysis individually to determine aflatoxin concentrations. A region of interest (ROI) was created for each kernel to extract averaged spectra. Compared with healthy kernels, fluorescence spectral peaks for contaminated kernels shifted to longer wavelengths with lower intensity, and reflectance values for contaminated kernels were lower with a different spectral shape in 700-800 nm region. Principal component analysis was applied for data compression before classifying kernels into contaminated and healthy based on a 20 ppb threshold utilizing the K-nearest neighbors algorithm. The best overall accuracy achieved was 92.67% for germ side in the fluorescence data analysis. The germ side generally performed better than endosperm side. Fluorescence and reflectance image data achieved similar accuracy.

  12. Hyperspectral image reconstruction using RGB color for foodborne pathogen detection on agar plates

    NASA Astrophysics Data System (ADS)

    Yoon, Seung-Chul; Shin, Tae-Sung; Park, Bosoon; Lawrence, Kurt C.; Heitschmidt, Gerald W.

    2014-03-01

    This paper reports the latest development of a color vision technique for detecting colonies of foodborne pathogens grown on agar plates with a hyperspectral image classification model that was developed using full hyperspectral data. The hyperspectral classification model depended on reflectance spectra measured in the visible and near-infrared spectral range from 400 and 1,000 nm (473 narrow spectral bands). Multivariate regression methods were used to estimate and predict hyperspectral data from RGB color values. The six representative non-O157 Shiga-toxin producing Eschetichia coli (STEC) serogroups (O26, O45, O103, O111, O121, and O145) were grown on Rainbow agar plates. A line-scan pushbroom hyperspectral image sensor was used to scan 36 agar plates grown with pure STEC colonies at each plate. The 36 hyperspectral images of the agar plates were divided in half to create training and test sets. The mean Rsquared value for hyperspectral image estimation was about 0.98 in the spectral range between 400 and 700 nm for linear, quadratic and cubic polynomial regression models and the detection accuracy of the hyperspectral image classification model with the principal component analysis and k-nearest neighbors for the test set was up to 92% (99% with the original hyperspectral images). Thus, the results of the study suggested that color-based detection may be viable as a multispectral imaging solution without much loss of prediction accuracy compared to hyperspectral imaging.

  13. Manifold alignment for classification of multitemporal hyperspectral image data

    NASA Astrophysics Data System (ADS)

    Yang, Hsiu-Han

    Analyzing remotely sensed images to obtain land cover classification maps is an effective approach for acquiring information over landscapes that can be accomplished over extended areas with limited ground surveys. Further, with advances in remote sensing technology, spaceborne hyperspectral sensors provide the capability to acquire a set of images that have both high spectral and temporal resolution. These images are suitable for monitoring and analyzing environmental changes with subtle spectral characteristics. However, inherent characteristics of multitemporal hyperspectral images, including high dimensionality, nonlinearity, and nonstationarity phenomena over time and across large areas, pose several challenges for classification. This research addresses the issues of classification tasks in the presence of spectral shifts within multitemporal hyperspectral images by leveraging the concept of the data manifold. Although manifold learning has been applied successfully in single image hyperspectral data classification to address high dimensionality and nonlinear spectral responses, research related to manifold learning for multitemporal classification studies is limited. The proposed approaches utilize spectral signatures and spatial proximity to construct similar "local" geometries of temporal images. By aligning these underlying manifolds optimally, the impacts of nonstationary effects are mitigated and classification is accomplished in a representative temporal data manifold. "Global" manifolds learned from temporal hyperspectral images have a major advantage in faithful representation of the data in an image, such as retaining relationships between different classes. Local manifolds are favored in discriminating difficult classes and for computation efficiency. A new hybrid global-local manifold alignment method that combines the advantages of global and local manifolds for effective multitemporal image classification is also proposed. Results illustrate the

  14. Hyperspectral Image Turbulence Measurements of the Atmosphere

    NASA Technical Reports Server (NTRS)

    Lane, Sarah E.; West, Leanne L.; Gimmestad, Gary G.; Kireev, Stanislav; Smith, William L., Sr.; Burdette, Edward M.; Daniels, Taumi; Cornman, Larry

    2012-01-01

    A Forward Looking Interferometer (FLI) sensor has the potential to be used as a means of detecting aviation hazards in flight. One of these hazards is mountain wave turbulence. The results from a data acquisition activity at the University of Colorado s Mountain Research Station will be presented here. Hyperspectral datacubes from a Telops Hyper-Cam are being studied to determine if evidence of a turbulent event can be identified in the data. These data are then being compared with D&P TurboFT data, which are collected at a much higher time resolution and broader spectrum.

  15. Spectral Super-Resolution for Hyperspectral Images via Sparse Representations

    NASA Astrophysics Data System (ADS)

    Fotiadou, Konstantina; Tsagkatakis, Grigorios; Tsakalides, Panagiotis

    2016-08-01

    The spectral dimension of hyperspectral imaging (HSI) systems plays a fundamental role in numerous terrestrial and earth observation applications, including spectral unmixing, target detection, and classification among others. However, in several cases the spectral resolution of HSI systems is sacrificed for the shake of spatial resolution, as such in the case of snapshot spectral imaging systems that acquire simultaneously the 3D data- cube. We address these limitations by introducing an efficient post-acquisition spectral resolution enhancement scheme that synthesizes the full spectrum from only few acquired spectral bands. To achieve this goal we utilize a regularized sparse-based learning procedure where the relations between high and low-spectral resolution hyper-pixels are efficiently encoded via a coupled dictionary learning scheme. Experimental results and quantitative validation on data acquired by NASA's EO-1 mission's Hyperion sensor, demonstrate the potential of the proposed approach for accurate spectral resolution enhancement of hyperspectral imaging systems.

  16. Terahertz wavelength encoding compressive imaging

    NASA Astrophysics Data System (ADS)

    Zhang, Qiong; Wang, Xinke; Zhang, Yan

    2016-11-01

    Terahertz (THz) compressive imaging can obtain two dimensional image with a single or linear detector, which can overcome the bottleneck problem of lacking of THz two dimensional detectors. In this presentation, we propose a method to obtain two dimensional images using a linear detector. A plano-convex cylindrical lens is employed to perform Fourier transform and to encode one dimensional information of an object into wavelengths. After recording, both amplitude and phase information for different frequency at each pixel of the line detector are extracted, two dimensional image of the object can be reconstructed. Numerical simulation demonstrates the validity of the proposed method.

  17. Modelling the appearance of chromatic environment using hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Fomins, S.; Ozolinsh, M.

    2013-11-01

    Color of objects is a spectral composition of incident light source, reflection properties of the object itself, and spectral tuning of the eye. Light sources with different spectral characteristics can produce metameric representation of color; however most variable in this regard is vision. Pigments of color vision are continuously bleached by different stimuli and optical density of the pigment is changed, while continuous conditions provide an adaptation and perception of white. Special cases are color vision deficiencies which cover almost 8 % of male population in Europe. Hyperspectral imaging allows obtaining the spectra of the environment and modelling the performance of the dichromatic, anomalous trichromatic, as also normal trichromatic adapted behavior. First, CRI Nuance hyperspectral imaging system was spectrally calibrated for natural continuous spectral illumination of high color rendering index and narrow band fluorescent light sources. Full-scale images of color deficiency tests were acquired in the range of 420 to 720 nm to evaluate the modelling capacity for dichromatic and anomalous trichromatic vision. Hyperspectral images were turned to cone excitation images according to Stockman and Sharpe (2000) 1. Further, model was extended for anomalous trichromacy conditions. Cone sensitivity spectra were shifted by 4 nm according to each anomaly type. LWS and SWS cone signals were balanced in each condition to provide the appropriate appearance of colors in CIE system.

  18. Hyperspectral imaging for detection of cholesterol in human skin

    NASA Astrophysics Data System (ADS)

    Milanič, Matija; Bjorgan, Asgeir; Larsson, Marcus; Marraccini, Paolo; Strömberg, Tomas; Randeberg, Lise L.

    2015-03-01

    Hypercholesterolemia is characterized by high levels of cholesterol in the blood and is associated with an increased risk of atherosclerosis and coronary heart disease. Early detection of hypercholesterolemia is necessary to prevent onset and progress of cardiovascular disease. Optical imaging techniques might have a potential for early diagnosis and monitoring of hypercholesterolemia. In this study, hyperspectral imaging was investigated for this application. The main aim of the study was to identify spectral and spatial characteristics that can aid identification of hypercholesterolemia in facial skin. The first part of the study involved a numerical simulation of human skin affected by hypercholesterolemia. A literature survey was performed to identify characteristic morphological and physiological parameters. Realistic models were prepared and Monte Carlo simulations were performed to obtain hyperspectral images. Based on the simulations optimal wavelength regions for differentiation between normal and cholesterol rich skin were identified. Minimum Noise Fraction transformation (MNF) was used for analysis. In the second part of the study, the simulations were verified by a clinical study involving volunteers with elevated and normal levels of cholesterol. The faces of the volunteers were scanned by a hyperspectral camera covering the spectral range between 400 nm and 720 nm, and characteristic spectral features of the affected skin were identified. Processing of the images was done after conversion to reflectance and masking of the images. The identified features were compared to the known cholesterol levels of the subjects. The results of this study demonstrate that hyperspectral imaging of facial skin can be a promising, rapid modality for detection of hypercholesterolemia.

  19. A Minimum Spanning Forest Based Hyperspectral Image Classification Method for Cancerous Tissue Detection

    PubMed Central

    Pike, Robert; Patton, Samuel K.; Lu, Guolan; Halig, Luma V.; Wang, Dongsheng; Chen, Zhuo Georgia; Fei, Baowei

    2014-01-01

    Hyperspectral imaging is a developing modality for cancer detection. The rich information associated with hyperspectral images allow for the examination between cancerous and healthy tissue. This study focuses on a new method that incorporates support vector machines into a minimum spanning forest algorithm for differentiating cancerous tissue from normal tissue. Spectral information was gathered to test the algorithm. Animal experiments were performed and hyperspectral images were acquired from tumor-bearing mice. In vivo imaging experimental results demonstrate the applicability of the proposed classification method for cancer tissue classification on hyperspectral images. PMID:25426272

  20. Recent Developments in Hyperspectral Imaging for Assessment of Food Quality and Safety

    PubMed Central

    Huang, Hui; Liu, Li; Ngadi, Michael O.

    2014-01-01

    Hyperspectral imaging which combines imaging and spectroscopic technology is rapidly gaining ground as a non-destructive, real-time detection tool for food quality and safety assessment. Hyperspectral imaging could be used to simultaneously obtain large amounts of spatial and spectral information on the objects being studied. This paper provides a comprehensive review on the recent development of hyperspectral imaging applications in food and food products. The potential and future work of hyperspectral imaging for food quality and safety control is also discussed. PMID:24759119

  1. High-sensitivity hyperspectral imager for biomedical video diagnostic applications

    NASA Astrophysics Data System (ADS)

    Leitner, Raimund; Arnold, Thomas; De Biasio, Martin

    2010-04-01

    Video endoscopy allows physicians to visually inspect inner regions of the human body using a camera and only minimal invasive optical instruments. It has become an every-day routine in clinics all over the world. Recently a technological shift was done to increase the resolution from PAL/NTSC to HDTV. But, despite a vast literature on invivo and in-vitro experiments with multi-spectral point and imaging instruments that suggest that a wealth of information for diagnostic overlays is available in the visible spectrum, the technological evolution from colour to hyper-spectral video endoscopy is overdue. There were two approaches (NBI, OBI) that tried to increase the contrast for a better visualisation by using more than three wavelengths. But controversial discussions about the real benefit of a contrast enhancement alone, motivated a more comprehensive approach using the entire spectrum and pattern recognition algorithms. Up to now the hyper-spectral equipment was too slow to acquire a multi-spectral image stack at reasonable video rates rendering video endoscopy applications impossible. Recently, the availability of fast and versatile tunable filters with switching times below 50 microseconds made an instrumentation for hyper-spectral video endoscopes feasible. This paper describes a demonstrator for hyper-spectral video endoscopy and the results of clinical measurements using this demonstrator for measurements after otolaryngoscopic investigations and thorax surgeries. The application investigated here is the detection of dysplastic tissue, although hyper-spectral video endoscopy is of course not limited to cancer detection. Other applications are the detection of dysplastic tissue or polyps in the colon or the gastrointestinal tract.

  2. Airborne Hyperspectral Imaging of Seagrass and Coral Reef

    NASA Astrophysics Data System (ADS)

    Merrill, J.; Pan, Z.; Mewes, T.; Herwitz, S.

    2013-12-01

    This talk presents the process of project preparation, airborne data collection, data pre-processing and comparative analysis of a series of airborne hyperspectral projects focused on the mapping of seagrass and coral reef communities in the Florida Keys. As part of a series of large collaborative projects funded by the NASA ROSES program and the Florida Fish and Wildlife Conservation Commission and administered by the NASA UAV Collaborative, a series of airborne hyperspectral datasets were collected over six sites in the Florida Keys in May 2012, October 2012 and May 2013 by Galileo Group, Inc. using a manned Cessna 172 and NASA's SIERRA Unmanned Aerial Vehicle. Precise solar and tidal data were used to calculate airborne collection parameters and develop flight plans designed to optimize data quality. Two independent Visible and Near-Infrared (VNIR) hyperspectral imaging systems covering 400-100nm were used to collect imagery over six Areas of Interest (AOIs). Multiple collections were performed over all sites across strict solar windows in the mornings and afternoons. Independently developed pre-processing algorithms were employed to radiometrically correct, synchronize and georectify individual flight lines which were then combined into color balanced mosaics for each Area of Interest. The use of two different hyperspectral sensor as well as environmental variations between each collection allow for the comparative analysis of data quality as well as the iterative refinement of flight planning and collection parameters.

  3. The challenges of analysing blood stains with hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Kuula, J.; Puupponen, H.-H.; Rinta, H.; Pölönen, I.

    2014-06-01

    Hyperspectral imaging is a potential noninvasive technology for detecting, separating and identifying various substances. In the forensic and military medicine and other CBRNE related use it could be a potential method for analyzing blood and for scanning other human based fluids. For example, it would be valuable to easily detect whether some traces of blood are from one or more persons or if there are some irrelevant substances or anomalies in the blood. This article represents an experiment of separating four persons' blood stains on a white cotton fabric with a SWIR hyperspectral camera and FT-NIR spectrometer. Each tested sample includes standardized 75 _l of 100 % blood. The results suggest that on the basis of the amount of erythrocytes in the blood, different people's blood might be separable by hyperspectral analysis. And, referring to the indication given by erythrocytes, there might be a possibility to find some other traces in the blood as well. However, these assumptions need to be verified with wider tests, as the number of samples in the study was small. According to the study there also seems to be several biological, chemical and physical factors which affect alone and together on the hyperspectral analyzing results of blood on fabric textures, and these factors need to be considered before making any further conclusions on the analysis of blood on various materials.

  4. Hyperspectral image classification based on NMF Features Selection Method

    NASA Astrophysics Data System (ADS)

    Abe, Bolanle T.; Jordaan, J. A.

    2013-12-01

    Hyperspectral instruments are capable of collecting hundreds of images corresponding to wavelength channels for the same area on the earth surface. Due to the huge number of features (bands) in hyperspectral imagery, land cover classification procedures are computationally expensive and pose a problem known as the curse of dimensionality. In addition, higher correlation among contiguous bands increases the redundancy within the bands. Hence, dimension reduction of hyperspectral data is very crucial so as to obtain good classification accuracy results. This paper presents a new feature selection technique. Non-negative Matrix Factorization (NMF) algorithm is proposed to obtain reduced relevant features in the input domain of each class label. This aimed to reduce classification error and dimensionality of classification challenges. Indiana pines of the Northwest Indiana dataset is used to evaluate the performance of the proposed method through experiments of features selection and classification. The Waikato Environment for Knowledge Analysis (WEKA) data mining framework is selected as a tool to implement the classification using Support Vector Machines and Neural Network. The selected features subsets are subjected to land cover classification to investigate the performance of the classifiers and how the features size affects classification accuracy. Results obtained shows that performances of the classifiers are significant. The study makes a positive contribution to the problems of hyperspectral imagery by exploring NMF, SVMs and NN to improve classification accuracy. The performances of the classifiers are valuable for decision maker to consider tradeoffs in method accuracy versus method complexity.

  5. Real-time airborne hyperspectral imaging of land mines

    NASA Astrophysics Data System (ADS)

    Ivanco, Tyler; Achal, Steve; McFee, John E.; Anger, Cliff; Young, Jane

    2007-04-01

    DRDC Suffeld and Itres Research have jointly investigated the use of visible and infrared hyperspectral imaging (HSI) for surface and buried land mine detection since 1989. These studies have demonstrated reliable passive HSI detection of surface-laid mines, based on their reflectance spectra, from airborne and ground-based platforms. Commercial HSI instruments collect and store image data at aircraft speeds, but the data are analysed off- line. This is useful for humanitarian demining, but unacceptable for military countermine operations. We have developed a hardware and software system with algorithms that can process the raw hyperspectral data in real time to detect mines. The custom algorithms perform radiometric correction of the raw data, then classify pixels of the corrected data, referencing a spectral signature library. The classification results are stored and displayed in real time, that is, within a few frame times of the data acquisition. Such real-time mine detection was demonstrated for the first time from a slowly moving land vehicle in March 2000. This paper describes an improved system which can achieve real-time detection of mines from an airborne platform, with its commensurately higher data rates. The system is presently compatible with the Itres family of visible/near infrared, short wave infrared and thermal infrared pushbroom hyperspectral imagers and its broadband thermal infrared pushbroom imager. Experiments to detect mines from an airborne platform in real time were conducted at DRDC Suffield in November 2006. Surface-laid land mines were detected in real time from a slowly moving helicopter with generally good detection rates and low false alarm rates. To the authors' knowledge, this is the first time that land mines have been detected from an airborne platform in real time using hyperspectral imaging.

  6. A spatially adaptive spectral re-ordering technique for lossless coding of hyper-spectral images

    NASA Technical Reports Server (NTRS)

    Memon, Nasir D.; Galatsanos, Nikolas

    1995-01-01

    In this paper, we propose a new approach, applicable to lossless compression of hyper-spectral images, that alleviates some limitations of linear prediction as applied to this problem. According to this approach, an adaptive re-ordering of the spectral components of each pixel is performed prior to prediction and encoding. This re-ordering adaptively exploits, on a pixel-by pixel basis, the presence of inter-band correlations for prediction. Furthermore, the proposed approach takes advantage of spatial correlations, and does not introduce any coding overhead to transmit the order of the spectral bands. This is accomplished by using the assumption that two spatially adjacent pixels are expected to have similar spectral relationships. We thus have a simple technique to exploit spectral and spatial correlations in hyper-spectral data sets, leading to compression performance improvements as compared to our previously reported techniques for lossless compression. We also look at some simple error modeling techniques for further exploiting any structure that remains in the prediction residuals prior to entropy coding.

  7. Flight and Ground Results from Long-Wave and Mid-wave Airborne Hyperspectral Spectrographic Images

    DTIC Science & Technology

    2009-10-01

    hyperspectral imager for landmine detection ,” in Detection and Remediation Technologies for Mines and Mine-like Targets X, R.S.Harmon, J.T.Broach... hyperspectral imaging of land mines,” in Detection and Remediation Technologies for Mines and Mine-Like Targets XII, R.S.Harmon, J.T.Broach, and... hyperspectral pushbroom imagers which are ideally suited for landmine detection , but which also have numerous applications outside the defence community

  8. Fast and Adaptive Lossless On-Board Hyperspectral Data Compression System for Space Applications

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh; Bakhshi, Alireza; Keymeulen, Didier; Klimesh, Matthew

    2009-01-01

    Efficient on-board lossless hyperspectral data compression reduces the data volume necessary to meet NASA and DoD limited downlink capabilities. The techniques also improves signature extraction, object recognition and feature classification capabilities by providing exact reconstructed data on constrained downlink resources. At JPL a novel, adaptive and predictive technique for lossless compression of hyperspectral data was recently developed. This technique uses an adaptive filtering method and achieves a combination of low complexity and compression effectiveness that far exceeds state-of-the-art techniques currently in use. The JPL-developed 'Fast Lossless' algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. It is of low computational complexity and thus well-suited for implementation in hardware, which makes it practical for flight implementations of pushbroom instruments. A prototype of the compressor (and decompressor) of the algorithm is available in software, but this implementation may not meet speed and real-time requirements of some space applications. Hardware acceleration provides performance improvements of 10x-100x vs. the software implementation (about 1M samples/sec on a Pentium IV machine). This paper describes a hardware implementation of the JPL-developed 'Fast Lossless' compression algorithm on a Field Programmable Gate Array (FPGA). The FPGA implementation targets the current state of the art FPGAs (Xilinx Virtex IV and V families) and compresses one sample every clock cycle to provide a fast and practical real-time solution for Space applications.

  9. Fast and Adaptive Lossless On-Board Hyperspectral Data Compression System for Space Applications

    NASA Technical Reports Server (NTRS)

    Aranki, Nazeeh; Bakhshi, Alireza; Keymeulen, Didier; Klimesh, Matthew

    2009-01-01

    Efficient on-board lossless hyperspectral data compression reduces the data volume necessary to meet NASA and DoD limited downlink capabilities. The techniques also improves signature extraction, object recognition and feature classification capabilities by providing exact reconstructed data on constrained downlink resources. At JPL a novel, adaptive and predictive technique for lossless compression of hyperspectral data was recently developed. This technique uses an adaptive filtering method and achieves a combination of low complexity and compression effectiveness that far exceeds state-of-the-art techniques currently in use. The JPL-developed 'Fast Lossless' algorithm requires no training data or other specific information about the nature of the spectral bands for a fixed instrument dynamic range. It is of low computational complexity and thus well-suited for implementation in hardware, which makes it practical for flight implementations of pushbroom instruments. A prototype of the compressor (and decompressor) of the algorithm is available in software, but this implementation may not meet speed and real-time requirements of some space applications. Hardware acceleration provides performance improvements of 10x-100x vs. the software implementation (about 1M samples/sec on a Pentium IV machine). This paper describes a hardware implementation of the JPL-developed 'Fast Lossless' compression algorithm on a Field Programmable Gate Array (FPGA). The FPGA implementation targets the current state of the art FPGAs (Xilinx Virtex IV and V families) and compresses one sample every clock cycle to provide a fast and practical real-time solution for Space applications.

  10. Sublingual vein extraction algorithm based on hyperspectral tongue imaging technology.

    PubMed

    Li, Qingli; Wang, Yiting; Liu, Hongying; Guan, Yana; Xu, Liang

    2011-04-01

    Among the parts of the human tongue surface, the sublingual vein is one of the most important ones which may have pathological relationship with some diseases. To analyze this information quantitatively, one primitive work is to extract sublingual veins accurately from tongue body. In this paper, a hyperspectral tongue imaging system instead of a digital camera is used to capture sublingual images. A hidden Markov model approach is presented to extract the sublingual veins from the hyperspectral sublingual images. This approach characterizes the spectral correlation and the band-to-band variability using a hidden Markov process, where the model parameters are estimated by the spectra of the pixel vectors forming the observation sequences. The proposed algorithm, the pixel-based sublingual vein segmentation algorithm, and the spectral angle mapper algorithm are tested on a total of 150 scenes of hyperspectral sublingual veins images to evaluate the performance of the new method. The experimental results demonstrate that the proposed algorithm can extract the sublingual veins more accurately than the traditional algorithms and can perform well even in a noisy environment.

  11. Hyperspectral imaging for detecting pathogens grown on agar plates

    NASA Astrophysics Data System (ADS)

    Yoon, Seung Chul; Lawrence, Kurt C.; Siragusa, Gregory R.; Line, John E.; Park, Bosoon; Windham, William R.

    2007-09-01

    This paper is concerned with the development of a hyperspectral imaging technique for detecting and identifying one of the most common foodborne pathogens, Campylobacter. Direct plating using agars is an effective tool for laboratory tests and analyses of microorganisms. The morphology (size, growth pattern, color, etc.) of colonies grown on agar plates has been widely used to tentatively differentiate organisms. However, it is sometimes difficult to differentiate target organisms like Campylobacters from other contaminants grown together on the same agar plates. A hyperspectral imaging system operating at the visible and near infrared (VNIR) spectral region from 400 nm to 900 nm was set up to measure spectral signatures of 17 different Campylobacter and non-Campylobacter subspecies. Protocols for culturing, imaging samples and for calibrating measured data were developed. The VNIR spectral library of all 17 organisms commonly encountered in poultry was established from calibrated hyperspectral images. A classification algorithm was developed to locate and identify Campylobacters, non-Campylobacter contaminants, and background agars with 99.29% accuracy. This research has a potential to be expanded to detect other pathogens grown on agar media.

  12. Miniaturized hyperspectral imager calibration and UAV flight campaigns

    NASA Astrophysics Data System (ADS)

    Saari, Heikki; Pölönen, Ilkka; Salo, Heikki; Honkavaara, Eija; Hakala, Teemu; Holmlund, Christer; Mäkynen, Jussi; Mannila, Rami; Antila, Tapani; Akujärvi, Altti

    2013-10-01

    VTT Technical Research Centre of Finland has developed Tunable Fabry-Perot Interferometer (FPI) based miniaturized hyperspectral imager which can be operated from light weight Unmanned Aerial Vehicles (UAV). The concept of the hyperspectral imager has been published in the SPIE Proc. 7474, 8174 and 8374. This instrument requires dedicated laboratory and on-board calibration procedures which are described. During summer 2012 extensive UAV Hyperspectral imaging campaigns in the wavelength range 400 - 900 nm at resolution range 10 - 40 nm @ FWHM were performed to study forest inventory, crop biomass and nitrogen distributions and environmental status of natural water applications. The instrument includes spectral band limiting filters which can be used for the on-board wavelength scale calibration by scanning the FPI pass band center wavelength through the low and high edge of the operational wavelength band. The procedure and results of the calibration tests will be presented. A short summary of the performed extensive UAV imaging campaign during summer 2012 will be presented.

  13. Mineral identification in hyperspectral imaging using Sparse-PCA

    NASA Astrophysics Data System (ADS)

    Yousefi, Bardia; Sojasi, Saeed; Ibarra Castanedo, Clemente; Beaudoin, Georges; Huot, François; Maldague, Xavier P. V.; Chamberland, Martin; Lalonde, Erik

    2016-05-01

    Hyperspectral imaging has been considerably developed during the recent decades. The application of hyperspectral imagery and infrared thermography, particularly for the automatic identification of minerals from satellite images, has been the subject of several interesting researches. In this study, a method is presented for the automated identification of the mineral grains typically used from satellite imagery and adapted for analyzing collected sample grains in a laboratory environment. For this, an approach involving Sparse Principle Components Analysis (SPCA) based on spectral abundance mapping techniques (i.e. SAM, SID, NormXCorr) is proposed for extraction of the representative spectral features. It develops an approximation of endmember as a reference spectrum process through the highest sparse principle component of the pure mineral grains. Subsequently, the features categorized by kernel Extreme Learning Machine (Kernel- ELM) classify and identify the mineral grains in a supervised manner. Classification is conducted in the binary scenario and the results indicate the dependency to the training spectra.

  14. Hyperspectral imaging for differentiation of foreign materials from pinto beans

    NASA Astrophysics Data System (ADS)

    Mehrubeoglu, Mehrube; Zemlan, Michael; Henry, Sam

    2015-09-01

    Food safety and quality in packaged products are paramount in the food processing industry. To ensure that packaged products are free of foreign materials, such as debris and pests, unwanted materials mixed with the targeted products must be detected before packaging. A portable hyperspectral imaging system in the visible-to-NIR range has been used to acquire hyperspectral data cubes from pinto beans that have been mixed with foreign matter. Bands and band ratios have been identified as effective features to develop a classification scheme for detection of foreign materials in pinto beans. A support vector machine has been implemented with a quadratic kernel to separate pinto beans and background (Class 1) from all other materials (Class 2) in each scene. After creating a binary classification map for the scene, further analysis of these binary images allows separation of false positives from true positives for proper removal action during packaging.

  15. Hyperspectral optical imaging of two different species of lepidoptera

    NASA Astrophysics Data System (ADS)

    Medina, José Manuel; Nascimento, Sérgio Miguel Cardoso; Vukusic, Pete

    2011-05-01

    In this article, we report a hyperspectral optical imaging application for measurement of the reflectance spectra of photonic structures that produce structural colors with high spatial resolution. The measurement of the spectral reflectance function is exemplified in the butterfly wings of two different species of Lepidoptera: the blue iridescence reflected by the nymphalid Morpho didius and the green iridescence of the papilionid Papilio palinurus. Color coordinates from reflectance spectra were calculated taking into account human spectral sensitivity. For each butterfly wing, the observed color is described by a characteristic color map in the chromaticity diagram and spreads over a limited volume in the color space. The results suggest that variability in the reflectance spectra is correlated with different random arrangements in the spatial distribution of the scales that cover the wing membranes. Hyperspectral optical imaging opens new ways for the non-invasive study and classification of different forms of irregularity in structural colors.

  16. Objective color classification of ecstasy tablets by hyperspectral imaging.

    PubMed

    Edelman, Gerda; Lopatka, Martin; Aalders, Maurice

    2013-07-01

    The general procedure followed in the examination of ecstasy tablets for profiling purposes includes a color description, which depends highly on the observers' perception. This study aims to provide objective quantitative color information using visible hyperspectral imaging. Both self-manufactured and illicit tablets, created with different amounts of known colorants were analyzed. We derived reflectance spectra from hyperspectral images of these tablets, and successfully determined the most likely colorant used in the production of all self-manufactured tablets and four of five illicit tablets studied. Upon classification, the concentration of the colorant was estimated using a photon propagation model and a single reference measurement of a tablet of known concentration. The estimated concentrations showed a high correlation with the actual values (R(2) = 0.9374). The achieved color information, combined with other physical and chemical characteristics, can provide a powerful tool for the comparison of tablet seizures, which may reveal their origin.

  17. Hyperspectral optical imaging of two different species of lepidoptera

    PubMed Central

    2011-01-01

    In this article, we report a hyperspectral optical imaging application for measurement of the reflectance spectra of photonic structures that produce structural colors with high spatial resolution. The measurement of the spectral reflectance function is exemplified in the butterfly wings of two different species of Lepidoptera: the blue iridescence reflected by the nymphalid Morpho didius and the green iridescence of the papilionid Papilio palinurus. Color coordinates from reflectance spectra were calculated taking into account human spectral sensitivity. For each butterfly wing, the observed color is described by a characteristic color map in the chromaticity diagram and spreads over a limited volume in the color space. The results suggest that variability in the reflectance spectra is correlated with different random arrangements in the spatial distribution of the scales that cover the wing membranes. Hyperspectral optical imaging opens new ways for the non-invasive study and classification of different forms of irregularity in structural colors. PMID:21711872

  18. A rough sets approach of hyperspectral image classification

    NASA Astrophysics Data System (ADS)

    Wu, Zhaocong; Li, Deren

    2005-10-01

    Rough set theory has a powerful capability for attributes reduction and classification rules extraction, while artificial neural network (ANN) performances well in classification problems with a satisfactory accuracy. In this paper we focus our attention to investigate a way of integrating rough set theory and multi layer perceptron (MLP) in soft computing paradigm for classification and rule generation of hyperspectral remote sensing image classification. The novelty of this method lies in applying rough set theory for extracting classification rules and computing fuzzy membership values directly from decision table after attributes reduction on a real-valued attribute table consisting of classification features. The successful application of this approach in hyperspectral remote sensing images mineral classification illustrates the flexibility and practicality of this new approach.

  19. Imaging of blood cells based on snapshot Hyper-Spectral Imaging systems

    NASA Astrophysics Data System (ADS)

    Robison, Christopher J.; Kolanko, Christopher; Bourlai, Thirimachos; Dawson, Jeremy M.

    2015-05-01

    Snapshot Hyper-Spectral imaging systems are capable of capturing several spectral bands simultaneously, offering coregistered images of a target. With appropriate optics, these systems are potentially able to image blood cells in vivo as they flow through a vessel, eliminating the need for a blood draw and sample staining. Our group has evaluated the capability of a commercial Snapshot Hyper-Spectral imaging system, the Arrow system from Rebellion Photonics, in differentiating between white and red blood cells on unstained blood smear slides. We evaluated the imaging capabilities of this hyperspectral camera; attached to a microscope at varying objective powers and illumination intensity. Hyperspectral data consisting of 25, 443x313 hyperspectral bands with ~3nm spacing were captured over the range of 419 to 494nm. Open-source hyper-spectral data cube analysis tools, used primarily in Geographic Information Systems (GIS) applications, indicate that white blood cells features are most prominent in the 428-442nm band for blood samples viewed under 20x and 50x magnification over a varying range of illumination intensities. These images could potentially be used in subsequent automated white blood cell segmentation and counting algorithms for performing in vivo white blood cell counting.

  20. An algorithm of remotely sensed hyperspectral image fusion based on spectral unmixing and feature reconstruction

    NASA Astrophysics Data System (ADS)

    Sun, Xuejian; Zhang, Lifu; Cen, Yi; Zhang, Mingyue

    2016-05-01

    In order to get high spatial resolution hyperspectral data, many studies have examined methods to combine spectral information contained in hyperspectral image with spatial information contained in multispectral/panchromatic image. This paper developed a new hyperspectral image fusion method base on the non-negative matrix factorization (NMF) theory. Data sets obtained by the Airborne Visible Infrared Imaging Spectrometer (AVIRIS) was used to evaluate the performance of the method. Experimental results show that the proposed algorithm can provide a good way to solve the problem of high spatial resolution hyperspectral data shortage.

  1. M-estimation for robust sparse unmixing of hyperspectral images

    NASA Astrophysics Data System (ADS)

    Toomik, Maria; Lu, Shijian; Nelson, James D. B.

    2016-10-01

    Hyperspectral unmixing methods often use a conventional least squares based lasso which assumes that the data follows the Gaussian distribution. The normality assumption is an approximation which is generally invalid for real imagery data. We consider a robust (non-Gaussian) approach to sparse spectral unmixing of remotely sensed imagery which reduces the sensitivity of the estimator to outliers and relaxes the linearity assumption. The method consists of several appropriate penalties. We propose to use an lp norm with 0 < p < 1 in the sparse regression problem, which induces more sparsity in the results, but makes the problem non-convex. On the other hand, the problem, though non-convex, can be solved quite straightforwardly with an extensible algorithm based on iteratively reweighted least squares. To deal with the huge size of modern spectral libraries we introduce a library reduction step, similar to the multiple signal classification (MUSIC) array processing algorithm, which not only speeds up unmixing but also yields superior results. In the hyperspectral setting we extend the traditional least squares method to the robust heavy-tailed case and propose a generalised M-lasso solution. M-estimation replaces the Gaussian likelihood with a fixed function ρ(e) that restrains outliers. The M-estimate function reduces the effect of errors with large amplitudes or even assigns the outliers zero weights. Our experimental results on real hyperspectral data show that noise with large amplitudes (outliers) often exists in the data. This ability to mitigate the influence of such outliers can therefore offer greater robustness. Qualitative hyperspectral unmixing results on real hyperspectral image data corroborate the efficacy of the proposed method.

  2. Hyperspectral cathodoluminescence imaging of modern and fossil carbonate shells

    NASA Astrophysics Data System (ADS)

    England, Jennifer; Cusack, Maggie; Paterson, Niall W.; Edwards, Paul; Lee, Martin R.; Martin, Robert

    2006-09-01

    Optical cathodoluminescence (CL) is commonly used to identify diagenetically altered carbonate fossils, yet such an interpretation is problematic as present-day carbonate shells may also luminesce. Hyperspectral CL imaging combines CL microscopy and CL spectroscopy to quantitatively analyze luminescence emission. Cold optical CL and hyperspectral CL imaging were carried out on four modern biominerals, a Rhynchonelliform brachiopod, a Craniid brachiopod, a bivalve, and the eggshell of the domestic fowl. A fossil Craniid brachiopod was analyzed to compare luminescence emission with that from the modern Craniid brachiopod. The beam conditions used for optical CL vary between studies, which hinders the direct comparison of CL analyses. This study assesses the effect of beam current and beam diameter on the intensity of luminescence emission. By characterizing the effect of beam conditions on different CaCO3 biominerals, comparisons can be made between CL studies. Hyperspectral CL imaging can be carried out in combination with WDS element analysis. By comparing hyperspectral CL images with element maps the causes of luminescence can to some extent be determined. The intensity of luminescence emitted from the modern biominerals differs under the same beam conditions. All four modern shells emit blue luminescence. In N. anomala, there is a correlation between Mn2+ concentration and luminescence intensity in the 620- to 630-nm wavelength band, which is apparent in the inner region of the shell. The fossil Craniid also emits blue luminescence, and texture within the shell wall is apparent; however, the luminescence emission between 620 and 630 nm that is evident in N. anomala is absent.

  3. Hyperspectral imaging technique for determination of pork freshness attributes

    NASA Astrophysics Data System (ADS)

    Li, Yongyu; Zhang, Leilei; Peng, Yankun; Tang, Xiuying; Chao, Kuanglin; Dhakal, Sagar

    2011-06-01

    Freshness of pork is an important quality attribute, which can vary greatly in storage and logistics. The specific objectives of this research were to develop a hyperspectral imaging system to predict pork freshness based on quality attributes such as total volatile basic-nitrogen (TVB-N), pH value and color parameters (L*,a*,b*). Pork samples were packed in seal plastic bags and then stored at 4°C. Every 12 hours. Hyperspectral scattering images were collected from the pork surface at the range of 400 nm to 1100 nm. Two different methods were performed to extract scattering feature spectra from the hyperspectral scattering images. First, the spectral scattering profiles at individual wavelengths were fitted accurately by a three-parameter Lorentzian distribution (LD) function; second, reflectance spectra were extracted from the scattering images. Partial Least Square Regression (PLSR) method was used to establish prediction models to predict pork freshness. The results showed that the PLSR models based on reflectance spectra was better than combinations of LD "parameter spectra" in prediction of TVB-N with a correlation coefficient (r) = 0.90, a standard error of prediction (SEP) = 7.80 mg/100g. Moreover, a prediction model for pork freshness was established by using a combination of TVB-N, pH and color parameters. It could give a good prediction results with r = 0.91 for pork freshness. The research demonstrated that hyperspectral scattering technique is a valid tool for real-time and nondestructive detection of pork freshness.

  4. Design Analysis of a Space Based Chromotomographic Hyperspectral Imaging Experiment

    DTIC Science & Technology

    2010-03-01

    Tilt Platforms S-340 Platform Recommended Models Mirror Aluminum Aluminum S-340.Ax Invar Zerodur glass S-340.ix Titanium BK7 glass S-340.Tx Steel S-340...composed of a telescope, two grating spectrometers, calibration lamps, and focal plane electronics and cooling system. The telescope is a three mirror ...advanced hyperspectral imager for coastal bathymetry is that the experiment will closely mirror that of the proposed space-based chromotomographic hy

  5. A hyperspectral image data exploration workbench for environmental science applications

    SciTech Connect

    Woyna, M.A.; Christiansen, J.H.; Zawada, D.G.; Simunich, K.L.

    1994-08-01

    The Hyperspectral Image Data Exploration Workbench (HIDEW) software system has been developed by Argonne National Laboratory to enable analysts at Unix workstations to conveniently access and manipulate high-resolution imagery data for analysis, mapping purposes, and input to environmental modeling applications. HIDEW is fully object-oriented, including the underlying database. This system was developed as an aid to site characterization work and atmospheric research projects.

  6. Spatial and spectral performance of a chromotomosynthetic hyperspectral imaging system

    NASA Astrophysics Data System (ADS)

    Bostick, Randall L.; Perram, Glen P.

    2012-03-01

    The spatial and spectral resolutions achievable by a prototype rotating prism chromotomosynthetic imaging (CTI) system operating in the visible spectrum are described. The instrument creates hyperspectral imagery by collecting a set of 2D images with each spectrally projected at a different rotation angle of the prism. Mathematical reconstruction techniques that have been well tested in the field of medical physics are used to reconstruct the data to produce the 3D hyperspectral image. The instrument operates with a 100 mm focusing lens in the spectral range of 400-900 nm with a field of view of 71.6 mrad and angular resolution of 0.8-1.6 μrad. The spectral resolution is 0.6 nm at the shortest wavelengths, degrading to over 10 nm at the longest wavelengths. Measurements using a point-like target show that performance is limited by chromatic aberration. The system model is slightly inaccurate due to poor estimation of detector spatial resolution, this is corrected based on results improving model performance. As with traditional dispersion technology, calibration of the transformed wavelength axis is required, though with this technology calibration improves both spectral and spatial resolution. While this prototype does not operate at high speeds, components exist which will allow for CTI systems to generate hyperspectral video imagery at rates greater than 100 Hz.

  7. Going Deeper With Contextual CNN for Hyperspectral Image Classification.

    PubMed

    Lee, Hyungtae; Kwon, Heesung

    2017-10-01

    In this paper, we describe a novel deep convolutional neural network (CNN) that is deeper and wider than other existing deep networks for hyperspectral image classification. Unlike current state-of-the-art approaches in CNN-based hyperspectral image classification, the proposed network, called contextual deep CNN, can optimally explore local contextual interactions by jointly exploiting local spatio-spectral relationships of neighboring individual pixel vectors. The joint exploitation of the spatio-spectral information is achieved by a multi-scale convolutional filter bank used as an initial component of the proposed CNN pipeline. The initial spatial and spectral feature maps obtained from the multi-scale filter bank are then combined together to form a joint spatio-spectral feature map. The joint feature map representing rich spectral and spatial properties of the hyperspectral image is then fed through a fully convolutional network that eventually predicts the corresponding label of each pixel vector. The proposed approach is tested on three benchmark data sets: the Indian Pines data set, the Salinas data set, and the University of Pavia data set. Performance comparison shows enhanced classification performance of the proposed approach over the current state-of-the-art on the three data sets.

  8. Spatial and temporal point tracking in real hyperspectral images

    NASA Astrophysics Data System (ADS)

    Aminov, Benjamin; Nichtern, Ofir; Rotman, S. R.

    2008-10-01

    This paper addresses the problem of tracking a dim moving point target from a sequence of hyperspectral cubes. The resulting tracking algorithm is useful for many staring technologies such as the ones used in space surveillance and missile tracking applications. In these applications, the images consist of targets moving at sub-pixel velocity and noisy background consisting of evolving clutter and noise. The demand for a low false alarm rate (FAR) on one hand and a high probability of detection (PD) on the other makes the tracking a challenging task. The use of hyperspectral images should be superior to current technologies using broadband IR images due to the ability of exploiting simultaneously two target specific properties: the spectral target characteristics and the time dependent target behavior. The proposed solution consists of three stages: the first stage transforms the hyperspectral cubes into a two dimensional sequence, using known point target detection acquisition methods; the second stage involves a temporal separation of the 2D sequence into sub-sequences and the usage of a variance filter (VF) to detect the presence of targets from the temporal profile of each pixel in each group, while suppressing clutter specific influences. This stage creates a new sequence containing a target with a seemingly faster velocity; the third stage applies the Dynamic Programming Algorithm (DPA) that proves to be a very effective algorithm for the tracking of moving targets with low SNR at around pixel velocity. The system is tested on both synthetic and real data.

  9. Visible to SWIR hyperspectral imaging for produce safety and quality evaluation

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral imaging techniques, combining the advantages of spectroscopy and imaging, have found wider use in food quality and safety evaluation applications during the past decade. In light of the prevalent use of hyperspectral imaging techniques in the visible to near-infrared (VNIR: 400 -1000 n...

  10. PARTIAL LEAST SQUARES REGRESSION OF HYPERSPECTRAL IMAGES FOR CONTAMINATION DETECTION ON POULTRY CARCASSES

    USDA-ARS?s Scientific Manuscript database

    Abstract The U.S. Department of Agriculture has developed multispectral and hyperspectral imaging systems to detect faecal contaminants. Until recently, the hyperspectral imaging system has been used as a research tool to detect a few optimum wavelengths for use in a multispectral imaging system. ...

  11. Partial Least Squares Regression of Hyperspectral Images for Contaminant Detection on Poultry Carcasses

    USDA-ARS?s Scientific Manuscript database

    The U.S. Department of Agriculture has developed multispectral and hyperspectral imaging systems to detect faecal contaminants. Until recently, the hyperspectral imaging system has been used as a research tool to detect a few optimum wavelengths for use in a multispectral imaging system. However, ...

  12. Identification of staphylococcus species with hyperspectral microscope imaging and classification algrorithms

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral microscope imaging is presented as a rapid and efficient tool to classify foodborne bacteria species. The spectral data were obtained from five different species of Staphylococcus spp. with a hyperspectral microscope imaging system that provided a maximum of 89 contiguous spectral imag...

  13. Efficient hyperspectral image segmentation using geometric active contour formulation

    NASA Astrophysics Data System (ADS)

    Albalooshi, Fatema A.; Sidike, Paheding; Asari, Vijayan K.

    2014-10-01

    In this paper, we present a new formulation of geometric active contours that embeds the local hyperspectral image information for an accurate object region and boundary extraction. We exploit self-organizing map (SOM) unsupervised neural network to train our model. The segmentation process is achieved by the construction of a level set cost functional, in which, the dynamic variable is the best matching unit (BMU) coming from SOM map. In addition, we use Gaussian filtering to discipline the deviation of the level set functional from a signed distance function and this actually helps to get rid of the re-initialization step that is computationally expensive. By using the properties of the collective computational ability and energy convergence capability of the active control models (ACM) energy functional, our method optimizes the geometric ACM energy functional with lower computational time and smoother level set function. The proposed algorithm starts with feature extraction from raw hyperspectral images. In this step, the principal component analysis (PCA) transformation is employed, and this actually helps in reducing dimensionality and selecting best sets of the significant spectral bands. Then the modified geometric level set functional based ACM is applied on the optimal number of spectral bands determined by the PCA. By introducing local significant spectral band information, our proposed method is capable to force the level set functional to be close to a signed distance function, and therefore considerably remove the need of the expensive re-initialization procedure. To verify the effectiveness of the proposed technique, we use real-life hyperspectral images and test our algorithm in varying textural regions. This framework can be easily adapted to different applications for object segmentation in aerial hyperspectral imagery.

  14. Compressing TV-image data

    NASA Technical Reports Server (NTRS)

    Hilbert, E. E.; Lee, J.; Rice, R. F.; Schlutsmeyer, A. P.

    1981-01-01

    Compressing technique calculates activity estimator for each segment of image line. Estimator is used in conjunction with allowable bits per line, N, to determine number of bits necessary to code each segment and which segments can tolerate truncation. Preprocessed line data are then passed to adaptive variable-length coder, which selects optimum transmission code. Method increases capacity of broadcast and cable television transmissions and helps reduce size of storage medium for video and digital audio recordings.

  15. Compressing TV-image data

    NASA Technical Reports Server (NTRS)

    Hilbert, E. E.; Lee, J.; Rice, R. F.; Schlutsmeyer, A. P.

    1981-01-01

    Compressing technique calculates activity estimator for each segment of image line. Estimator is used in conjunction with allowable bits per line, N, to determine number of bits necessary to code each segment and which segments can tolerate truncation. Preprocessed line data are then passed to adaptive variable-length coder, which selects optimum transmission code. Method increases capacity of broadcast and cable television transmissions and helps reduce size of storage medium for video and digital audio recordings.

  16. Hyperspectral image segmentation using a cooperative nonparametric approach

    NASA Astrophysics Data System (ADS)

    Taher, Akar; Chehdi, Kacem; Cariou, Claude

    2013-10-01

    In this paper a new unsupervised nonparametric cooperative and adaptive hyperspectral image segmentation approach is presented. The hyperspectral images are partitioned band by band in parallel and intermediate classification results are evaluated and fused, to get the final segmentation result. Two unsupervised nonparametric segmentation methods are used in parallel cooperation, namely the Fuzzy C-means (FCM) method, and the Linde-Buzo-Gray (LBG) algorithm, to segment each band of the image. The originality of the approach relies firstly on its local adaptation to the type of regions in an image (textured, non-textured), and secondly on the introduction of several levels of evaluation and validation of intermediate segmentation results before obtaining the final partitioning of the image. For the management of similar or conflicting results issued from the two classification methods, we gradually introduced various assessment steps that exploit the information of each spectral band and its adjacent bands, and finally the information of all the spectral bands. In our approach, the detected textured and non-textured regions are treated separately from feature extraction step, up to the final classification results. This approach was first evaluated on a large number of monocomponent images constructed from the Brodatz album. Then it was evaluated on two real applications using a respectively multispectral image for Cedar trees detection in the region of Baabdat (Lebanon) and a hyperspectral image for identification of invasive and non invasive vegetation in the region of Cieza (Spain). A correct classification rate (CCR) for the first application is over 97% and for the second application the average correct classification rate (ACCR) is over 99%.

  17. Hyperspectral image analysis for CARS, SRS, and Raman data

    PubMed Central

    Karuna, Arnica; Borri, Paola; Langbein, Wolfgang

    2015-01-01

    In this work, we have significantly enhanced the capabilities of the hyperspectral image analysis (HIA) first developed by Masia et al. 1 The HIA introduced a method to factorize the hyperspectral data into the product of component concentrations and spectra for quantitative analysis of the chemical composition of the sample. The enhancements shown here comprise (1) a spatial weighting to reduce the spatial variation of the spectral error, which improves the retrieval of the chemical components with significant local but small global concentrations; (2) a new selection criterion for the spectra used when applying sparse sampling2 to speed up sequential hyperspectral imaging; and (3) a filter for outliers in the data using singular value decomposition, suited e.g. to suppress motion artifacts. We demonstrate the enhancements on coherent anti‐Stokes Raman scattering, stimulated Raman scattering, and spontaneous Raman data. We provide the HIA software as executable for public use. © 2015 The Authors. Journal of Raman Spectroscopy published by John Wiley & Sons, Ltd. PMID:27478301

  18. Detection of early plant stress responses in hyperspectral images

    NASA Astrophysics Data System (ADS)

    Behmann, Jan; Steinrücken, Jörg; Plümer, Lutz

    2014-07-01

    Early stress detection in crop plants is highly relevant, but hard to achieve. We hypothesize that close range hyperspectral imaging is able to uncover stress related processes non-destructively in the early stages which are invisible to the human eye. We propose an approach which combines unsupervised and supervised methods in order to identify several stages of progressive stress development from series of hyperspectral images. Stress of an entire plant is detected by stress response levels at pixel scale. The focus is on drought stress in barley (Hordeum vulgare). Unsupervised learning is used to separate hyperspectral signatures into clusters related to different stages of stress response and progressive senescence. Whereas all such signatures may be found in both, well watered and drought stressed plants, their respective distributions differ. Ordinal classification with Support Vector Machines (SVM) is used to quantify and visualize the distribution of progressive stages of senescence and to separate well watered from drought stressed plants. For each senescence stage a distinctive set of most relevant Vegetation Indices (VIs) is identified. The method has been applied on two experiments involving potted barley plants under well watered and drought stress conditions in a greenhouse. Drought stress is detected up to ten days earlier than using NDVI. Furthermore, it is shown that some VIs have overall relevance, while others are specific to particular senescence stages. The transferability of the method to the field is illustrated by an experiment on maize (Zea mays).

  19. Hyperspectral image analysis for CARS, SRS, and Raman data.

    PubMed

    Masia, Francesco; Karuna, Arnica; Borri, Paola; Langbein, Wolfgang

    2015-08-01

    In this work, we have significantly enhanced the capabilities of the hyperspectral image analysis (HIA) first developed by Masia et al. 1 The HIA introduced a method to factorize the hyperspectral data into the product of component concentrations and spectra for quantitative analysis of the chemical composition of the sample. The enhancements shown here comprise (1) a spatial weighting to reduce the spatial variation of the spectral error, which improves the retrieval of the chemical components with significant local but small global concentrations; (2) a new selection criterion for the spectra used when applying sparse sampling2 to speed up sequential hyperspectral imaging; and (3) a filter for outliers in the data using singular value decomposition, suited e.g. to suppress motion artifacts. We demonstrate the enhancements on coherent anti-Stokes Raman scattering, stimulated Raman scattering, and spontaneous Raman data. We provide the HIA software as executable for public use. © 2015 The Authors. Journal of Raman Spectroscopy published by John Wiley & Sons, Ltd.

  20. Semi-supervised feature learning for hyperspectral image classification

    NASA Astrophysics Data System (ADS)

    Zhang, Pengfei; Cao, Liujuan; Wang, Cheng; Li, Jonathan

    2016-03-01

    Hyperspectral image has high-dimensional Spectral-spatial features, those features with some noisy and redundant information. Since redundant features can have significant adverse effect on learning performance. So efficient and robust feature selection methods are make the best of labeled and unlabeled points to extract meaningful features and eliminate noisy ones. On the other hand, obtaining sufficient accurate labeled data is either impossible or expensive. In order to take advantage of both precious labeled and unlabeled data points, in this paper, we propose a new semisupervised feature selection method, Firstly, we use labeled points are to enlarge the margin between data points from different classes; Secondly, we use unlabeled points to find the local structure of the data space; Finally, we compare our proposed algorithm with Fisher score, PCA and Laplacian score on HSI classification. Experimental results on benchmark hyperspectral data sets demonstrate the efficiency and effectiveness of our proposed algorithm.

  1. Detection of aircraft exhaust in hyperspectral image data

    NASA Astrophysics Data System (ADS)

    Lane, Sarah E.; West, Leanne L.; Gimmestad, Gary G.; Smith, William L., Sr.; Burdette, Edward M.

    2011-10-01

    The use of a hyperspectral imaging system for the detection of gases has been investigated, and algorithms have been developed for various applications. Of particular interest here is the ability to use these algorithms in the detection of the wake disturbances trailing an aircraft. A dataset of long wave infrared (LWIR) hyperspectral datacubes taken with a Telops Hyper-Cam at Hartsfield-Jackson International Airport in Atlanta, Georgia is investigated. The methodology presented here assumes that the aircraft engine exhaust gases will become entrained in wake vortices that develop; therefore, if the exhaust can be detected upon exiting the engines, it can be followed through subsequent datacubes until the vortex disturbance is detected. Gases known to exist in aircraft exhaust are modeled, and the Adaptive Coherence/Cosine Estimator (ACE) is used to search for these gases. Although wake vortices have not been found in the data, an unknown disturbance following the passage of the aircraft has been discovered.

  2. Online hyperspectral imaging system for evaluating quality of agricultural products

    NASA Astrophysics Data System (ADS)

    Mo, Changyeun; Kim, Giyoung; Lim, Jongguk

    2017-06-01

    The consumption of fresh-cut agricultural produce in Korea has been growing. The browning of fresh-cut vegetables that occurs during storage and foreign substances such as worms and slugs are some of the main causes of consumers' concerns with respect to safety and hygiene. The purpose of this study is to develop an on-line system for evaluating quality of agricultural products using hyperspectral imaging technology. The online evaluation system with single visible-near infrared hyperspectral camera in the range of 400 nm to 1000 nm that can assess quality of both surfaces of agricultural products such as fresh-cut lettuce was designed. Algorithms to detect browning surface were developed for this system. The optimal wavebands for discriminating between browning and sound lettuce as well as between browning lettuce and the conveyor belt were investigated using the correlation analysis and the one-way analysis of variance method. The imaging algorithms to discriminate the browning lettuces were developed using the optimal wavebands. The ratio image (RI) algorithm of the 533 nm and 697 nm images (RI533/697) for abaxial surface lettuce and the ratio image algorithm (RI533/697) and subtraction image (SI) algorithm (SI538-697) for adaxial surface lettuce had the highest classification accuracies. The classification accuracy of browning and sound lettuce was 100.0% and above 96.0%, respectively, for the both surfaces. The overall results show that the online hyperspectral imaging system could potentially be used to assess quality of agricultural products.

  3. Study on Huber fractal image compression.

    PubMed

    Jeng, Jyh-Horng; Tseng, Chun-Chieh; Hsieh, Jer-Guang

    2009-05-01

    In this paper, a new similarity measure for fractal image compression (FIC) is introduced. In the proposed Huber fractal image compression (HFIC), the linear Huber regression technique from robust statistics is embedded into the encoding procedure of the fractal image compression. When the original image is corrupted by noises, we argue that the fractal image compression scheme should be insensitive to those noises presented in the corrupted image. This leads to a new concept of robust fractal image compression. The proposed HFIC is one of our attempts toward the design of robust fractal image compression. The main disadvantage of HFIC is the high computational cost. To overcome this drawback, particle swarm optimization (PSO) technique is utilized to reduce the searching time. Simulation results show that the proposed HFIC is robust against outliers in the image. Also, the PSO method can effectively reduce the encoding time while retaining the quality of the retrieved image.

  4. Hyperspectral Image Analysis in Planetary Science and Astronomy

    NASA Astrophysics Data System (ADS)

    Merenyi, Erzsebet

    2014-01-01

    Hyperspectral images (spectral signatures acquired in hundreds of narrow, contiguous band passes on a regular spatial grid over a target area) have long been utilized in planetary astronomy for remote geochemical analyses. Typical hyperspectral imagery spans the visible to near-and-thermal-infrared wavelengths with 5-20 nm (λ/Δλ > 100) resolution, sufficient to resolve the discriminating spectral features of (near-)surface compounds. Compared with broad-band, multi-spectral imagery, hyperspectral data brings a phase change in the complexity of spectral patterns and the cluster structure and richness of the data space, and consequently in the analysis challenges for tasks like clustering, classification, regression, and parameter inference. Many traditional favorite techniques do not meet these challenges if one’s aim is to fully exploit the rich, intricate information captured by the sensor, ensure discovery of surprising small anomalies, and more. In stellar astronomy, where Ångström resolution is typical, the data complexity can grow even higher. With the advent of 21st century observatories such as ALMA, high spatial and spectral resolution image cubes with thousands of bands are extending into new and wider wavelength domains, adding impetus to develop and deploy increasingly powerful and efficient knowledge extraction techniques. In this talk I will highlight applications of brain-like machine learning, specifically advanced forms of neural maps that mimic analogous behaviors in natural neural maps in brains (for example, preferential attention to rare signals, to enhance discovery of small clusters). I will present examples of information extraction from hyperspectral data in planetary astronomy, and point out advantages over more traditional techniques, for “precision” data mining, discovery of small anomalies in the face of highly irregular cluster structure, accurate inference of non-linearly entangled latent parameters, or non-linear dimension

  5. Research of spectral curvature correction method for hyperspectral images

    NASA Astrophysics Data System (ADS)

    Li, Lin; Hu, Yong; Wang, Yueming

    2011-08-01

    The hyperspectral imager is able to acquire space and spectral information of ground object simultaneously. When using a prism splitting mode, different wavelengths of light will disperse nonlinearly in spectral dimension after going through the slit and the prism. Due to the longer slit and different angles of incidence, when going through the slit and the prism, the same wavelength of light will curve in space dimension. For SWIR bands, the maximum shift is more than 1.5 bandwidth. The shift cannot be ignored, for is alters the pixel spectral and reduces match accuracies between space and spectral information. In this paper, a correction method of non-uniform spectral radiance in hyperspectral image is put forward. First, the laboratory spectral calibration is performed to acquire center wavelength and full width half maximum (FWHM) of each band as well as each pixel. Secondly, for each band, the mean of center wavelength which is calculated according to the results of the spectral calibration is regarded as each pixel's adjusted center wavelength. For each band and each pixel, calculate the ratio coefficient based on adjacent bands, then establish a ratio coefficient form of full pixels. At last, correct the image by looking up the form. By using MNF transformation, a corrected image can be well evaluated, a brightness gradient of the images has been removed and the phenomenon of image spectral radiance mixing has been reduced greatly, especially at the edge of the image.

  6. A new deblurring morphological filter for hyperspectral images

    NASA Astrophysics Data System (ADS)

    Abdelkawy, Ezz Eldin F.; Mahmoud, Tarek A.; Hussein, Wesam M.

    2011-06-01

    Hyperspectral imaging becomes an important technique that increases the valuable information enclosed within the image. Spectral cube produced by this type of imaging introduces a new material signature known as "spectral signature". This signature is unique for each material as it depends on the molecular composition of the material surface. To produce the spectral cube, a spectrometer should be used in the imagery device to split the electromagnetic energy at different wavelengths before its projection on the imaging array. This spectrometer may be a dispersive element, such as prism and grating, or an electronically tuneable filter. Some of dispersive spectrometers, such as Fourier transform interferometer (FTIR) and image multi-spectral imaging (IMSS), are based on sliding the lenses, or mirrors, along the optical axis which may result in a slightly out-of-focus blurring. Blind deconvolution techniques have been successfully used to decrease this blurring but at the expense of edge sharpening which may be a problem in some applications such as target detection and recognition. In this paper, we introduce a new method to deblurr the hyperspectral images keeping edges as sharp as possible. This is done by firstly detecting the edges locations and then applying a class of morphological filtering. Motivated by the success of threshold decomposition, gradient-based operators are used to detect the locations of these edges followed by an adaptive morphological filter to sharpen these detected edges. Experimental results demonstrate that the performance of the proposed deblurring filter is superior to that of the blind deconvolution methods.

  7. AOTF hyperspectral microscopic imaging for foodborne pathogenic bacteria detection

    NASA Astrophysics Data System (ADS)

    Park, Bosoon; Lee, Sangdae; Yoon, Seung-Chul; Sundaram, Jaya; Windham, William R.; Hinton, Arthur, Jr.; Lawrence, Kurt C.

    2011-06-01

    Hyperspectral microscope imaging (HMI) method which provides both spatial and spectral information can be effective for foodborne pathogen detection. The AOTF-based hyperspectral microscope imaging method can be used to characterize spectral properties of biofilm formed by Salmonella enteritidis as well as Escherichia coli. The intensity of spectral imagery and the pattern of spectral distribution varied with system parameters (integration time and gain) of HMI system. The preliminary results demonstrated determination of optimum parameter values of HMI system and the integration time must be no more than 250 ms for quality image acquisition from biofilm formed by S. enteritidis. Among the contiguous spectral imagery between 450 and 800 nm, the intensity of spectral images at 498, 522, 550 and 594 nm were distinctive for biofilm; whereas, the intensity of spectral images at 546 nm was distinctive for E. coli. For more accurate comparison of intensity from spectral images, a calibration protocol, using neutral density filters and multiple exposures, need to be developed to standardize image acquisition. For the identification or classification of unknown food pathogen samples, ground truth regions-of-interest pixels need to be selected for "spectrally pure fingerprints" for the Salmonella and E. coli species.

  8. Quantum cascade laser-based hyperspectral imaging of biological tissue

    NASA Astrophysics Data System (ADS)

    Kröger, Niels; Egl, Alexander; Engel, Maria; Gretz, Norbert; Haase, Katharina; Herpich, Iris; Kränzlin, Bettina; Neudecker, Sabine; Pucci, Annemarie; Schönhals, Arthur; Vogt, Jochen; Petrich, Wolfgang

    2014-11-01

    The spectroscopy of analyte-specific molecular vibrations in tissue thin sections has opened up a path toward histopathology without the need for tissue staining. However, biomedical vibrational imaging has not yet advanced from academic research to routine histopathology due to long acquisition times for the microscopic hyperspectral images and/or cost and availability of the necessary equipment. Here we show that the combination of a fast-tuning quantum cascade laser with a microbolometer array detector allows for a rapid image acquisition and bares the potential for substantial cost reduction. A 3.1×2.8 mm2 unstained thin section of mouse jejunum has been imaged in the 9.2 to 9.7 μm wavelength range (spectral resolution ˜1 cm-1) within 5 min with diffraction limited spatial resolution. The comparison of this hyperspectral imaging approach with standard Fourier transform infrared imaging or mapping of the identical sample shows a reduction in acquisition time per wavenumber interval and image area by more than one or three orders of magnitude, respectively.

  9. Characterizing pigments with hyperspectral imaging variable false-color composites

    NASA Astrophysics Data System (ADS)

    Hayem-Ghez, Anita; Ravaud, Elisabeth; Boust, Clotilde; Bastian, Gilles; Menu, Michel; Brodie-Linder, Nancy

    2015-11-01

    Hyperspectral imaging has been used for pigment characterization on paintings for the last 10 years. It is a noninvasive technique, which mixes the power of spectrophotometry and that of imaging technologies. We have access to a visible and near-infrared hyperspectral camera, ranging from 400 to 1000 nm in 80-160 spectral bands. In order to treat the large amount of data that this imaging technique generates, one can use statistical tools such as principal component analysis (PCA). To conduct the characterization of pigments, researchers mostly use PCA, convex geometry algorithms and the comparison of resulting clusters to database spectra with a specific tolerance (like the Spectral Angle Mapper tool on the dedicated software ENVI). Our approach originates from false-color photography and aims at providing a simple tool to identify pigments thanks to imaging spectroscopy. It can be considered as a quick first analysis to see the principal pigments of a painting, before using a more complete multivariate statistical tool. We study pigment spectra, for each kind of hue (blue, green, red and yellow) to identify the wavelength maximizing spectral differences. The case of red pigments is most interesting because our methodology can discriminate the red pigments very well—even red lakes, which are always difficult to identify. As for the yellow and blue categories, it represents a good progress of IRFC photography for pigment discrimination. We apply our methodology to study the pigments on a painting by Eustache Le Sueur, a French painter of the seventeenth century. We compare the results to other noninvasive analysis like X-ray fluorescence and optical microscopy. Finally, we draw conclusions about the advantages and limits of the variable false-color image method using hyperspectral imaging.

  10. Hyperspectral image processing for detection and grading of skin erythema

    NASA Astrophysics Data System (ADS)

    Madooei, Ali; Abdlaty, Ramy Mohammed; Doerwald-Munoz, Lilian; Hayward, Joseph; Drew, Mark S.; Fang, Qiyin; Zerubia, Josiane

    2017-02-01

    Visual assessment is the most common clinical investigation of skin reactions in radiotherapy. Due to the subjective nature of this method, additional noninvasive techniques are needed for more accurate evaluation. Our goal is to evaluate the effectiveness of hyperspectral image analysis for that purpose. In this pilot study, we focused on detection and grading of skin Erythema. This paper reports our proposed processing pipeline and experimental findings. Experiments have been performed to demonstrate the efficacy of the proposed approach for (1) reproducing clinical assessments, and (2) outperforming RGB imaging data.

  11. [Realization of DICOM medical image compression technology].

    PubMed

    Wang, Chenxi; Wang, Quan; Ren, Haiping

    2013-05-01

    This paper introduces the implement method of DICOM medical image compression technology, The image part of DICOM files are extracted and converted to BMP format. The non-image information in DICOM file are stored into the text. When the final image of JPEG standard and non-image information are encapsulated to DICOM format images, it realizes the compression of medical image, which is beneficial to the image storage and transmission.

  12. Research on method of geometry and spectral calibration of pushbroom dispersive hyperspectral imager

    NASA Astrophysics Data System (ADS)

    He, Zhiping; Shu, Rong; Wang, Jianyu

    2012-11-01

    Development and application of airborne and aerospace hyperspectral imager press for high precision geometry and spectral calibration of pixels of image cube. The research of geometry and spectral calibration of pushbroom hyperspectral imager, its target is giving the coordinate of angle field of view and center wavelength of each detect unit in focal plane detector of hyperspectral imager, and achieves the high precision, full field of view, full channel geometry and spectral calibration. It is importance for imaging quantitative and deep application of hyperspectal imager. The paper takes the geometry and spectral calibration of pushbroom dispersive hyperspectral imager as case study, and research on the constitution and analysis of imaging mathematical model. Aimed especially at grating-dispersive hyperspectral imaging, the specialty of the imaging mode and dispersive method has been concretely analyzed. Based on the analysis, the theory and feasible method of geometry and spectral calibration of dispersive hyperspectral imager is set up. The key technique has been solved is As follows: 1). the imaging mathematical model and feasible method of geometry and spectral calibration for full pixels of image cube has been set up, the feasibility of the calibration method has been analyzed. 2). the engineering model and method of the geometry and spectral calibration of pushbroom dispersive hyperspectral imager has been set up and the calibration equipment has been constructed, and the calibration precision has been analyzed.

  13. Superpixel-Augmented Endmember Detection for Hyperspectral Images

    NASA Technical Reports Server (NTRS)

    Thompson, David R.; Castano, Rebecca; Gilmore, Martha

    2011-01-01

    Superpixels are homogeneous image regions comprised of several contiguous pixels. They are produced by shattering the image into contiguous, homogeneous regions that each cover between 20 and 100 image pixels. The segmentation aims for a many-to-one mapping from superpixels to image features; each image feature could contain several superpixels, but each superpixel occupies no more than one image feature. This conservative segmentation is relatively easy to automate in a robust fashion. Superpixel processing is related to the more general idea of improving hyperspectral analysis through spatial constraints, which can recognize subtle features at or below the level of noise by exploiting the fact that their spectral signatures are found in neighboring pixels. Recent work has explored spatial constraints for endmember extraction, showing significant advantages over techniques that ignore pixels relative positions. Methods such as AMEE (automated morphological endmember extraction) express spatial influence using fixed isometric relationships a local square window or Euclidean distance in pixel coordinates. In other words, two pixels covariances are based on their spatial proximity, but are independent of their absolute location in the scene. These isometric spatial constraints are most appropriate when spectral variation is smooth and constant over the image. Superpixels are simple to implement, efficient to compute, and are empirically effective. They can be used as a preprocessing step with any desired endmember extraction technique. Superpixels also have a solid theoretical basis in the hyperspectral linear mixing model, making them a principled approach for improving endmember extraction. Unlike existing approaches, superpixels can accommodate non-isometric covariance between image pixels (characteristic of discrete image features separated by step discontinuities). These kinds of image features are common in natural scenes. Analysts can substitute superpixels

  14. Progressive Transmission and Compression of Images

    NASA Technical Reports Server (NTRS)

    Kiely, A. B.

    1996-01-01

    We describe an image data compression strategy featuring progressive transmission. The method exploits subband coding and arithmetic coding for compression. We analyze the Laplacian probability density, which closely approximates the statistics of individual subbands, to determine a strategy for ordering the compressed subband data in a way that improves rate-distortion performance. Results are presented for a test image.

  15. Next generation miniature simultaneous multi-hyperspectral imaging systems

    NASA Astrophysics Data System (ADS)

    Hinnrichs, Michele; Gupta, Neelam

    2014-03-01

    The concept for a hyperspectral imaging system using a Fabry-Perot tunable filter (FPTF) array that is fabricated using "miniature optical electrical mechanical system" (MOEMS) technology. [1] Using an array of FPTF as an approach to hyperspectral imaging relaxes wavelength tuning requirements considerably because of the reduced portion of the spectrum that is covered by each element in the array. In this paper, Pacific Advanced Technology and ARL present the results of a concept design and performed analysis of a MOEMS based tunable Fabry-Perot array (FPTF) to perform simultaneous multispectral and hyperspectral imaging with relatively high spatial resolution. The concept design was developed with support of an Army SBIR Phase I program The Fabry-Perot tunable MOEMS filter array was combined with a miniature optics array and a focal plane array of 1024 x 1024 pixels to produce 16 colors every frame of the camera. Each color image has a spatial resolution of 256 x 256 pixels with an IFOV of 1.7 mrads and FOV of 25 degrees. The spectral images are collected simultaneously allowing high resolution spectral-spatial-temporal information in each frame of the camera, thus enabling the implementation of spectral-temporal-spatial algorithms in real-time to provide high sensitivity for the detection of weak signals in a high clutter background environment with low sensitivity to camera motion. The challenge in the design was the independent actuation of each Fabry Perot element in the array allowing for individual tuning. An additional challenge was the need to maximize the fill factor to improve the spatial coverage with minimal dead space. This paper will only address the concept design and analysis of the Fabry-Perot tunable filter array. A previous paper presented at SPIE DSS in 2012 explained the design of the optical array.

  16. Single aflatoxin contaminated corn kernel analysis with fluorescence hyperspectral image

    NASA Astrophysics Data System (ADS)

    Yao, Haibo; Hruska, Zuzana; Kincaid, Russell; Ononye, Ambrose; Brown, Robert L.; Cleveland, Thomas E.

    2010-04-01

    Aflatoxins are toxic secondary metabolites of the fungi Aspergillus flavus and Aspergillus parasiticus, among others. Aflatoxin contaminated corn is toxic to domestic animals when ingested in feed and is a known carcinogen associated with liver and lung cancer in humans. Consequently, aflatoxin levels in food and feed are regulated by the Food and Drug Administration (FDA) in the US, allowing 20 ppb (parts per billion) limits in food and 100 ppb in feed for interstate commerce. Currently, aflatoxin detection and quantification methods are based on analytical tests including thin-layer chromatography (TCL) and high performance liquid chromatography (HPLC). These analytical tests require the destruction of samples, and are costly and time consuming. Thus, the ability to detect aflatoxin in a rapid, nondestructive way is crucial to the grain industry, particularly to corn industry. Hyperspectral imaging technology offers a non-invasive approach toward screening for food safety inspection and quality control based on its spectral signature. The focus of this paper is to classify aflatoxin contaminated single corn kernels using fluorescence hyperspectral imagery. Field inoculated corn kernels were used in the study. Contaminated and control kernels under long wavelength ultraviolet excitation were imaged using a visible near-infrared (VNIR) hyperspectral camera. The imaged kernels were chemically analyzed to provide reference information for image analysis. This paper describes a procedure to process corn kernels located in different images for statistical training and classification. Two classification algorithms, Maximum Likelihood and Binary Encoding, were used to classify each corn kernel into "control" or "contaminated" through pixel classification. The Binary Encoding approach had a slightly better performance with accuracy equals to 87% or 88% when 20 ppb or 100 ppb was used as classification threshold, respectively.

  17. Image enhancement based on in vivo hyperspectral gastroscopic images: a case study

    NASA Astrophysics Data System (ADS)

    Gu, Xiaozhou; Han, Zhimin; Yao, Liqing; Zhong, Yunshi; Shi, Qiang; Fu, Ye; Liu, Changsheng; Wang, Xiguang; Xie, Tianyu

    2016-10-01

    Hyperspectral imaging (HSI) has been recognized as a powerful tool for noninvasive disease detection in the gastrointestinal field. However, most of the studies on HSI in this field have involved ex vivo biopsies or resected tissues. We proposed an image enhancement method based on in vivo hyperspectral gastroscopic images. First, we developed a flexible gastroscopy system capable of obtaining in vivo hyperspectral images of different types of stomach disease mucosa. Then, depending on a specific object, an appropriate band selection algorithm based on dependence of information was employed to determine a subset of spectral bands that would yield useful spatial information. Finally, these bands were assigned to be the color components of an enhanced image of the object. A gastric ulcer case study demonstrated that our method yields higher color tone contrast, which enhanced the displays of the gastric ulcer regions, and that it will be valuable in clinical applications.

  18. Quantitative wavelength analysis and image classification for intraoperative cancer diagnosis with hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Lu, Guolan; Qin, Xulei; Wang, Dongsheng; Chen, Zhuo Georgia; Fei, Baowei

    2015-03-01

    Complete surgical removal of tumor tissue is essential for postoperative prognosis after surgery. Intraoperative tumor imaging and visualization are an important step in aiding surgeons to evaluate and resect tumor tissue in real time, thus enabling more complete resection of diseased tissue and better conservation of healthy tissue. As an emerging modality, hyperspectral imaging (HSI) holds great potential for comprehensive and objective intraoperative cancer assessment. In this paper, we explored the possibility of intraoperative tumor detection and visualization during surgery using HSI in the wavelength range of 450 nm - 900 nm in an animal experiment. We proposed a new algorithm for glare removal and cancer detection on surgical hyperspectral images, and detected the tumor margins in five mice with an average sensitivity and specificity of 94.4% and 98.3%, respectively. The hyperspectral imaging and quantification method have the potential to provide an innovative tool for image-guided surgery.

  19. Multichannel tunable imager architecture for hyperspectral imaging in relevant spectral domains.

    PubMed

    Goenka, Chhavi; Semeter, Joshua; Noto, John; Baumgardner, Jeffrey; Riccobono, Juanita; Migliozzi, Mike; Dahlgren, Hanna; Marshall, Robert; Kapali, Sudha; Hirsch, Michael; Hampton, Donald; Akbari, Hassanali

    2016-04-20

    In this paper, we present a technique for dimensionality reduction in hyperspectral imaging during the data collection process. A four-channel hyperspectral imager using liquid crystal Fabry-Perot etalons has been built and used to verify this method for four applications: auroral imaging, plant study, landscape classification, and anomaly detection. This imager is capable of making measurements simultaneously in four wavelength ranges while being tunable within those ranges, and thus can be used to measure narrow contiguous bands in four spectral domains. In this paper, we describe the design, concept of operation, and deployment of this instrument. The results from preliminary testing of this instrument are discussed and are promising and demonstrate this instrument as a good candidate for hyperspectral imaging.

  20. Hyperspectral imaging system for disease scanning on banana plants

    NASA Astrophysics Data System (ADS)

    Ochoa, Daniel; Cevallos, Juan; Vargas, German; Criollo, Ronald; Romero, Dennis; Castro, Rodrigo; Bayona, Oswaldo

    2016-05-01

    Black Sigatoka (BS) is a banana plant disease caused by the fungus Mycosphaerella fijiensis. BS symptoms can be observed at late infection stages. By that time, BS has probably spread to other plants. In this paper, we present our current work on building an hyper-spectral (HS) imaging system aimed at in-vivo detection of BS pre-symptomatic responses in banana leaves. The proposed imaging system comprises a motorized stage, a high-sensitivity VIS-NIR camera and an optical spectrograph. To capture images of the banana leaf, the stage's speed and camera's frame rate must be computed to reduce motion blur and to obtain the same resolution along both spatial dimensions of the resulting HS cube. Our continuous leaf scanning approach allows imaging leaves of arbitrary length with minimum frame loss. Once the images are captured, a denoising step is performed to improve HS image quality and spectral profile extraction.

  1. Hyperspectral enhanced dark field microscopy for imaging blood cells.

    PubMed

    Verebes, Giulia Sacco; Melchiorre, Michele; Garcia-Leis, Adianez; Ferreri, Carla; Marzetti, Carla; Torreggiani, Armida

    2013-12-01

    In this work, a novel methodology based on hyperspectral imagery with enhanced Darkfield microscopy for probing and characterizing changes in blood cell components was tested. Two main categories of blood cells were analyzed, red and white blood cells. Unique spectral signatures of ordinary and most common deformed morphologies of red blood cells were identified. Moreover, examination of white blood cells allowed to characterize and differentiate active from inactive cells. The findings indicate the ability of this technique to detect changes in light scattering property of blood cells due to their morphological properties Since pathological states can alterate the discocyte shape, this preliminary, but promising application of the hyperspectral analysis to blood cells can be useful to evaluate significant correlations of blood cell spectral features in healthy and pathological conditions. The combination of the quali- and quantitative spectral signatures of hyperspectral imaging microscopy with the information of the subject health conditions may provide a new tool for clinical applications. Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  2. Psychophysical rating of image compression techniques

    NASA Technical Reports Server (NTRS)

    Stein, Charles S.; Hitchner, Lewis E.; Watson, Andrew B.

    1989-01-01

    Image compression schemes abound with little work which compares their bit-rate performance based on subjective fidelity measures. Statistical measures of image fidelity, such as squared error measures, do not necessarily correspond to subjective measures of image fidelity. Most previous comparisons of compression techniques have been based on these statistical measures. A psychophysical method has been used to estimate, for a number of compression techniques, a threshold bit-rate yielding a criterion level of performance in discriminating original and compressed images. The compression techniques studied include block truncation, Laplacian pyramid, block discrete cosine transform, with and without a human visual system scaling, and cortex transform coders.

  3. Psychophysical rating of image compression techniques

    NASA Technical Reports Server (NTRS)

    Stein, Charles S.; Hitchner, Lewis E.; Watson, Andrew B.

    1989-01-01

    Image compression schemes abound with little work which compares their bit-rate performance based on subjective fidelity measures. Statistical measures of image fidelity, such as squared error measures, do not necessarily correspond to subjective measures of image fidelity. Most previous comparisons of compression techniques have been based on these statistical measures. A psychophysical method has been used to estimate, for a number of compression techniques, a threshold bit-rate yielding a criterion level of performance in discriminating original and compressed images. The compression techniques studied include block truncation, Laplacian pyramid, block discrete cosine transform, with and without a human visual system scaling, and cortex transform coders.

  4. High compression image and image sequence coding

    NASA Technical Reports Server (NTRS)

    Kunt, Murat

    1989-01-01

    The digital representation of an image requires a very large number of bits. This number is even larger for an image sequence. The goal of image coding is to reduce this number, as much as possible, and reconstruct a faithful duplicate of the original picture or image sequence. Early efforts in image coding, solely guided by information theory, led to a plethora of methods. The compression ratio reached a plateau around 10:1 a couple of years ago. Recent progress in the study of the brain mechanism of vision and scene analysis has opened new vistas in picture coding. Directional sensitivity of the neurones in the visual pathway combined with the separate processing of contours and textures has led to a new class of coding methods capable of achieving compression ratios as high as 100:1 for images and around 300:1 for image sequences. Recent progress on some of the main avenues of object-based methods is presented. These second generation techniques make use of contour-texture modeling, new results in neurophysiology and psychophysics and scene analysis.

  5. Line-scan hyperspectral imaging techniques for food and agricultural applications

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral imaging technologies in the food and agricultural area have been evolved rapidly during the past 15 years owing to tremendous interest from both academic and industrial fields. Line-scan hyperspectral imaging is a major method that has been intensively researched and developed in diffe...

  6. Spatial assessment of soluble solid contents on apple slices using hyperspectral imaging

    USDA-ARS?s Scientific Manuscript database

    A partial least squares regression (PLSR) model to map internal soluble solids content (SSC) of apples using visible/near-infrared (VNIR) hyperspectral imaging was developed. The reflectance spectra of sliced apples were extracted from hyperspectral absorbance images obtained in the 400e1000 nm rang...

  7. Penetration depth measurement of near-infrared hyperspectral imaging light for milk powder

    USDA-ARS?s Scientific Manuscript database

    The increasingly common application of near-infrared (NIR) hyperspectral imaging technique to the analysis of food powders has led to the need for optical characterization of samples. This study was aimed at exploring the feasibility of quantifying penetration depth of NIR hyperspectral imaging ligh...

  8. Determination of germination quality of cucumber (Cucumis sativus) seed by LED-induced hyperspectral reflectance imaging

    USDA-ARS?s Scientific Manuscript database

    Purpose: We developed a viability evaluation method for cucumber (Cucumis sativus) seed using hyperspectral reflectance imaging. Methods: Reflectance spectra of cucumber seeds in the 400 to 1000 nm range were collected from hyperspectral reflectance images obtained using blue, green, and red LED ill...

  9. POULTRY SKIN TUMOR DETECTION IN HYPERSPECTRAL REFLECTANCE IMAGES BY COMBINING CLASSIFIERS

    USDA-ARS?s Scientific Manuscript database

    This paper presents a new method for detecting poultry skin tumors in hyperspectral reflectance images. We employ the principal component analysis (PCA), discrete wavelet transform (DWT), and kernel discriminant analysis (KDA) to extract the independent feature sets in hyperspectral reflectance imag...

  10. Application of hyperspectral imaging for characterization of intramuscular fat distribution in beef

    USDA-ARS?s Scientific Manuscript database

    In this study, a hyperspectral imaging system in the spectral region of 400–1000 nm was used for visualization and determination of intramuscular fat concentration in beef samples. Hyperspectral images were acquired for beef samples, and spectral information was then extracted from each single sampl...

  11. Hyperspectral imaging-based classification and wavebands selection for internal defect detection of pickling cucumbers

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral imaging is useful for detecting internal defect of pickling cucumbers. The technique, however, is not yet suitable for high-speed online implementation due to the challenges for analyzing large-scale hyperspectral images. This research was aimed to select the optimal wavebands from the...

  12. MCT-based SWIR hyperspectral imaging system for evaluation of biological samples

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral imaging has been shown to be a powerful tool for nondestructive evaluation of biological samples. We recently developed a new line-scan-based shortwave infrared (SWIR) hyperspectral imaging system. Critical sensing components of the system include a SWIR spectrograph, an MCT (HgCdTe) a...

  13. Hyperspectral microscope imaging methods to classify gram-positive and gram-negative foodborne pathogenic bacteria

    USDA-ARS?s Scientific Manuscript database

    An acousto-optic tunable filter-based hyperspectral microscope imaging method has potential for identification of foodborne pathogenic bacteria from microcolony rapidly with a single cell level. We have successfully developed the method to acquire quality hyperspectral microscopic images from variou...

  14. Differentiation of deciduous-calyx Korla fragrant pears using NIR hyperspectral imaging analysis

    USDA-ARS?s Scientific Manuscript database

    Near-infrared hyperspectral imaging was investigated as a potential method for automatic sorting of pears according to their calyx type. The hyperspectral images were analyzed and wavebands at 1190 nm and 1199 nm were selected for differentiating deciduous-calyx fruits from persistent-calyx ones. A ...

  15. Hyperspectral imaging-based classification and wavebands selection for internal defect detection of pickling cucumbers

    USDA-ARS?s Scientific Manuscript database

    Hyperspectral imaging is useful for detecting internal defect of pickling cucumbers. The technique, however, is not yet suitable for high-speed online implementation due to the challenges for analyzing large-scale hyperspectral images. This research was aimed to select the optimal wavebands from the...

  16. HICO and RAIDS Experiment Payload - Hyperspectral Imager for the Coastal Ocean

    NASA Technical Reports Server (NTRS)

    Corson, Mike

    2009-01-01

    HICO and RAIDS Experiment Payload - Hyperspectral Imager For The Coastal Ocean (HREP-HICO) will operate a visible and near-infrared (VNIR) Maritime Hyperspectral Imaging (MHSI) system, to detect, identify and quantify coastal geophysical features from the International Space Station.

  17. Hyperspectral imaging in the infrared using LIFTIRS

    SciTech Connect

    Bennett, C.L.; Carter, M.R.; Fields, D.J.

    1995-07-01

    In this article, recent characterization measurements made with LIFTIRS, the Livermore Imaging Fourier Transform InfraRed Spectrometer, are presented. A discussion is also presented of the relative merits of the various alternative designs for imaging spectrometers.

  18. Image data compression having minimum perceptual error

    NASA Technical Reports Server (NTRS)

    Watson, Andrew B. (Inventor)

    1995-01-01

    A method for performing image compression that eliminates redundant and invisible image components is described. The image compression uses a Discrete Cosine Transform (DCT) and each DCT coefficient yielded by the transform is quantized by an entry in a quantization matrix which determines the perceived image quality and the bit rate of the image being compressed. The present invention adapts or customizes the quantization matrix to the image being compressed. The quantization matrix comprises visual masking by luminance and contrast techniques and by an error pooling technique all resulting in a minimum perceptual error for any given bit rate, or minimum bit rate for a given perceptual error.

  19. Image coding compression based on DCT

    NASA Astrophysics Data System (ADS)

    Feng, Fei; Liu, Peixue; Jiang, Baohua

    2012-04-01

    With the development of computer science and communications, the digital image processing develops more and more fast. High quality images are loved by people, but it will waste more stored space in our computer and it will waste more bandwidth when it is transferred by Internet. Therefore, it's necessary to have an study on technology of image compression. At present, many algorithms about image compression is applied to network and the image compression standard is established. In this dissertation, some analysis on DCT will be written. Firstly, the principle of DCT will be shown. It's necessary to realize image compression, because of the widely using about this technology; Secondly, we will have a deep understanding of DCT by the using of Matlab, the process of image compression based on DCT, and the analysis on Huffman coding; Thirdly, image compression based on DCT will be shown by using Matlab and we can have an analysis on the quality of the picture compressed. It is true that DCT is not the only algorithm to realize image compression. I am sure there will be more algorithms to make the image compressed have a high quality. I believe the technology about image compression will be widely used in the network or communications in the future.

  20. Hyperspectral imaging for detection of arthritis: feasibility and prospects

    NASA Astrophysics Data System (ADS)

    Milanic, Matija; Paluchowski, Lukasz A.; Randeberg, Lise L.

    2015-09-01

    Rheumatoid arthritis (RA) is a disease that frequently leads to joint destruction. It has a high incidence rate worldwide, and the disease significantly reduces patients' quality of life. Detecting and treating inflammatory arthritis before structural damage to the joint has occurred is known to be essential for preventing patient disability and pain. Existing diagnostic technologies are expensive, time consuming, and require trained personnel to collect and interpret data. Optical techniques might be a fast, noninvasive alternative. Hyperspectral imaging (HSI) is a noncontact optical technique which provides both spectral and spatial information in one measurement. In this study, the feasibility of HSI in arthritis diagnostics was explored by numerical simulations and optimal imaging parameters were identified. Hyperspectral reflectance and transmission images of RA and normal human joint models were simulated using the Monte Carlo method. The spectral range was 600 to 1100 nm. Characteristic spatial patterns for RA joints and two spectral windows with transmission were identified. The study demonstrated that transmittance images of human joints could be used as one parameter for discrimination between arthritic and unaffected joints. The presented work shows that HSI is a promising imaging modality for the diagnostics and follow-up monitoring of arthritis in small joints.

  1. Digital image compression in dermatology: format comparison.

    PubMed

    Guarneri, F; Vaccaro, M; Guarneri, C

    2008-09-01

    Digital image compression (reduction of the amount of numeric data needed to represent a picture) is widely used in electronic storage and transmission devices. Few studies have compared the suitability of the different compression algorithms for dermatologic images. We aimed at comparing the performance of four popular compression formats, Tagged Image File (TIF), Portable Network Graphics (PNG), Joint Photographic Expert Group (JPEG), and JPEG2000 on clinical and videomicroscopic dermatologic images. Nineteen (19) clinical and 15 videomicroscopic digital images were compressed using JPEG and JPEG2000 at various compression factors and TIF and PNG. TIF and PNG are "lossless" formats (i.e., without alteration of the image), JPEG is "lossy" (the compressed image has a lower quality than the original), JPEG2000 has a lossless and a lossy mode. The quality of the compressed images was assessed subjectively (by three expert reviewers) and quantitatively (by measuring, point by point, the color differences from the original). Lossless JPEG2000 (49% compression) outperformed the other lossless algorithms, PNG and TIF (42% and 31% compression, respectively). Lossy JPEG2000 compression was slightly less efficient than JPEG, but preserved image quality much better, particularly at higher compression factors. For its good quality and compression ratio, JPEG2000 appears to be a good choice for clinical/videomicroscopic dermatologic image compression. Additionally, its diffusion and other features, such as the possibility of embedding metadata in the image file and to encode various parts of an image at different compression levels, make it perfectly suitable for the current needs of dermatology and teledermatology.

  2. Hyperspectral imaging of microalgae using two-photon excitation.

    SciTech Connect

    Sinclair, Michael B.; Melgaard, David Kennett; Reichardt, Thomas A.; Timlin, Jerilyn Ann; Garcia, Omar Fidel; Luk, Ting Shan; Jones, Howland D. T.; Collins, Aaron M.

    2010-10-01

    A considerable amount research is being conducted on microalgae, since microalgae are becoming a promising source of renewable energy. Most of this research is centered on lipid production in microalgae because microalgae produce triacylglycerol which is ideal for biodiesel fuels. Although we are interested in research to increase lipid production in algae, we are also interested in research to sustain healthy algal cultures in large scale biomass production farms or facilities. The early detection of fluctuations in algal health, productivity, and invasive predators must be developed to ensure that algae are an efficient and cost-effective source of biofuel. Therefore we are developing technologies to monitor the health of algae using spectroscopic measurements in the field. To do this, we have proposed to spectroscopically monitor large algal cultivations using LIDAR (Light Detection And Ranging) remote sensing technology. Before we can deploy this type of technology, we must first characterize the spectral bio-signatures that are related to algal health. Recently, we have adapted our confocal hyperspectral imaging microscope at Sandia to have two-photon excitation capabilities using a chameleon tunable laser. We are using this microscope to understand the spectroscopic signatures necessary to characterize microalgae at the cellular level prior to using these signatures to classify the health of bulk samples, with the eventual goal of using of LIDAR to monitor large scale ponds and raceways. By imaging algal cultures using a tunable laser to excite at several different wavelengths we will be able to select the optimal excitation/emission wavelengths needed to characterize algal cultures. To analyze the hyperspectral images generated from this two-photon microscope, we are using Multivariate Curve Resolution (MCR) algorithms to extract the spectral signatures and their associated relative intensities from the data. For this presentation, I will show our two

  3. Optimization and applications of an excitation-scanning hyperspectral imaging system

    NASA Astrophysics Data System (ADS)

    Mayes, Sam A.; Klomkaew, Phiwat; Leavesley, Silas J.; Rich, Thomas C.

    2017-02-01

    Currently, the majority of microscopic and endoscopic technologies utilize white light illumination. For a number of applications, hyper-spectral imaging can be shown to have significant improvements over standard white-light imaging techniques. This is true for both microscopy and in vivo imaging. However, hyperspectral imaging methods have suffered from slow application times. Often, minutes are required to gather a full imaging stack. Here we will describe the system and evaluate optimizations and applications of a novel excitation-scanning hyperspectral imaging system. We have developed and are optimizing a novel approach called excitation-scanning hyperspectral imaging that provides an order of magnitude increased signal strength. Optimization of the light path, optical components and illumination sources have allowed us to achieve high speed image acquisition. This high speed allows for potential live video acquisition. This excitation-scanning hyperspectral imaging technology has potential to impact a range of applications. The current system allows triggering of up to 16 wavelengths at less than 1 millisecond per image using digital strobing. Analog intensity control is also provided for a fully customizable excitation profile. A significant advantage of excitation scanning hyperspectral imaging is can identify multiple targets simultaneously in real time. We are optimizing the system to compare sensitivity and specificity of excitation-scanning hyperspectral imaging with pathology techniques. Finally, we are exploring utilizing this technology to measure cAMP distribution in three dimensions within a cell.

  4. Parallel optimization of pixel purity index algorithm for massive hyperspectral images in cloud computing environment

    NASA Astrophysics Data System (ADS)

    Chen, Yufeng; Wu, Zebin; Sun, Le; Wei, Zhihui; Li, Yonglong

    2016-04-01

    With the gradual increase in the spatial and spectral resolution of hyperspectral images, the size of image data becomes larger and larger, and the complexity of processing algorithms is growing, which poses a big challenge to efficient massive hyperspectral image processing. Cloud computing technologies distribute computing tasks to a large number of computing resources for handling large data sets without the limitation of memory and computing resource of a single machine. This paper proposes a parallel pixel purity index (PPI) algorithm for unmixing massive hyperspectral images based on a MapReduce programming model for the first time in the literature. According to the characteristics of hyperspectral images, we describe the design principle of the algorithm, illustrate the main cloud unmixing processes of PPI, and analyze the time complexity of serial and parallel algorithms. Experimental results demonstrate that the parallel implementation of the PPI algorithm on the cloud can effectively process big hyperspectral data and accelerate the algorithm.

  5. [Variety recognition of Chinese cabbage seeds by hyperspectral imaging combined with machine learning].

    PubMed

    Cheng, Shu-Xi; Kong, Wen-Wen; Zhang, Chu; Liu, Fei; He, Yong

    2014-09-01

    The variety of Chinese cabbage seeds were recognized using hyperspectral imaging with 256 bands from 874 to 1,734 nm in the present paper. A total of 239 Chinese cabbage seed samples including 8 varieties were acquired by hyperspectral image system, 158 for calibration and the rest 81 for validation. A region of 15 pixel x 15 pixel was selected as region of interest (ROI) and the average spectral information of ROI was obtained as sample spectral information. Multiplicative scatter correction was selected as pretreatment method to reduce the noise of spectrum. The performance of four classification algorithms including Ada-boost algorithm, extreme learning machine (ELM), random forest (RF) and support vector machine (SVM) were examined in this study. In order to simplify the input variables, 10 effective wavelengths (EMS) including 1,002, 1,005, 1,015, 1,019, 1,022, 1,103, 1,106, 1,167, 1,237 and 1,409 nm were selected by analysis of variable load distribution in PLS model. The reflectance of effective wavelengths was taken as the input variables to build effective wavelengths based models. The results indicated that the classification accuracy of the four models based on full-spectral were over 90%, the optimal models were extreme learning machine and random forest, and the classification accuracy achieved 100%. The classification accuracy of effective wavelengths based models declined slightly but the input variables compressed greatly, the efficiency of data processing was improved, and the classification accuracy of EW-ELM model achieved 100%. ELM performed well both in full-spectral model and in effective wavelength based model in this study, it was proven to be a useful tool for spectral analysis. So rapid and nondestructive recognition of Chinese cabbage seeds by hyperspectral imaging combined with machine learning is feasible, and it provides a new method for on line batch variety recognition of Chinese cabbage seeds.

  6. Simultaneous denoising and compression of multispectral images

    NASA Astrophysics Data System (ADS)

    Hagag, Ahmed; Amin, Mohamed; Abd El-Samie, Fathi E.

    2013-01-01

    A new technique for denoising and compression of multispectral satellite images to remove the effect of noise on the compression process is presented. One type of multispectral images has been considered: Landsat Enhanced Thematic Mapper Plus. The discrete wavelet transform (DWT), the dual-tree DWT, and a simple Huffman coder are used in the compression process. Simulation results show that the proposed technique is more effective than other traditional compression-only techniques.

  7. Hyperspectral Raman imaging of bone growth and regrowth chemistry

    NASA Astrophysics Data System (ADS)

    Pezzuti, Jerilyn A.; Morris, Michael D.; Bonadio, Jeffrey F.; Goldstein, Steven A.

    1998-06-01

    Hyperspectral Raman microscopic imaging of carbonated hydroxyapatite (HAP) is used to follow the chemistry of bone growth and regrowth. Deep red excitation is employed to minimize protein fluorescence interference. A passive line generator based on Powell lens optics and a motorized translation stage provide the imaging capabilities. Raman image contrast is generated from several lines of the HAP Raman spectrum, primarily the PO4-3. Factor analysis is used to minimize the integration time needed for acceptable contrast and to explore the chemical species within the bone. Bone age is visualized as variations in image intensity. High definition, high resolution images of newly formed bone and mature bone are compared qualitatively. The technique is currently under evaluation for study of experimental therapies for fracture repair.

  8. Image Compression in Signal-Dependent Noise

    NASA Astrophysics Data System (ADS)

    Shahnaz, Rubeena; Walkup, John F.; Krile, Thomas F.

    1999-09-01

    The performance of an image compression scheme is affected by the presence of noise, and the achievable compression may be reduced significantly. We investigated the effects of specific signal-dependent-noise (SDN) sources, such as film-grain and speckle noise, on image compression, using JPEG (Joint Photographic Experts Group) standard image compression. For the improvement of compression ratios noisy images are preprocessed for noise suppression before compression is applied. Two approaches are employed for noise suppression. In one approach an estimator designed specifically for the SDN model is used. In an alternate approach, the noise is first transformed into signal-independent noise (SIN) and then an estimator designed for SIN is employed. The performances of these two schemes are compared. The compression results achieved for noiseless, noisy, and restored images are also presented.

  9. Raman hyperspectral imaging of iron transport across membranes in cells

    NASA Astrophysics Data System (ADS)

    Das, Anupam; Costa, Xavier Felipe; Khmaladze, Alexander; Barroso, Margarida; Sharikova, Anna

    2016-09-01

    Raman scattering microscopy is a powerful imaging technique used to identify chemical composition, structural and conformational state of molecules of complex samples in biology, biophysics, medicine and materials science. In this work, we have shown that Raman techniques allow the measurement of the iron content in protein mixtures and cells. Since the mechanisms of iron acquisition, storage, and excretion by cells are not completely understood, improved knowledge of iron metabolism can offer insight into many diseases in which iron plays a role in the pathogenic process, such as diabetes, neurodegenerative diseases, cancer, and metabolic syndrome. Understanding of the processes involved in cellular iron metabolism will improve our knowledge of cell functioning. It will also have a big impact on treatment of diseases caused by iron deficiency (anemias) and iron overload (hereditary hemochromatosis). Previously, Raman studies have shown substantial differences in spectra of transferrin with and without bound iron, thus proving that it is an appropriate technique to determine the levels of bound iron in the protein mixture. We have extended these studies to obtain hyperspectral images of transferrin in cells. By employing a Raman scanning microscope together with spectral detection by a highly sensitive back-illuminated cooled CCD camera, we were able to rapidly acquire and process images of fixed cells with chemical selectivity. We discuss and compare various methods of hyperspectral Raman image analysis and demonstrate the use of these methods to characterize cellular iron content without the need for dye labeling.

  10. Radiometric Characterization of Hyperspectral Imagers using Multispectral Sensors

    NASA Technical Reports Server (NTRS)

    McCorkel, Joel; Kurt, Thome; Leisso, Nathan; Anderson, Nikolaus; Czapla-Myers, Jeff

    2009-01-01

    The Remote Sensing Group (RSG) at the University of Arizona has a long history of using ground-based test sites for the calibration of airborne and satellite based sensors. Often, ground-truth measurements at these test sites are not always successful due to weather and funding availability. Therefore, RSG has also automated ground instrument approaches and cross-calibration methods to verify the radiometric calibration of a sensor. The goal in the cross-calibration method is to transfer the calibration of a well-known sensor to that of a different sensor, This work studies the feasibility of determining the radiometric calibration of a hyperspectral imager using multispectral a imagery. The work relies on the Moderate Resolution Imaging Spectroradiometer (M0DIS) as a reference for the hyperspectral sensor Hyperion. Test sites used for comparisons are Railroad Valley in Nevada and a portion of the Libyan Desert in North Africa. Hyperion bands are compared to MODIS by band averaging Hyperion's high spectral resolution data with the relative spectral response of M0DlS. The results compare cross-calibration scenarios that differ in image acquisition coincidence, test site used for the calibration, and reference sensor. Cross-calibration results are presented that show agreement between the use of coincident and non-coincident image pairs within 2% in most brands as well as similar agreement between results that employ the different MODIS sensors as a reference.

  11. Raman hyperspectral image analysis of benzoyl peroxide additive

    NASA Astrophysics Data System (ADS)

    Wang, Xiaobin; Huang, Wenqian; Wang, Qingyan; Liu, Chen; Wang, Chaopeng; Yang, Guiyan; Zhao, Chunjiang

    2017-06-01

    This study adopted a Raman hyperspectral imaging system to collect the Raman spectra and hyperspectral images of benzoyl peroxide (BPO) additive for subsequent analysis. The raw Raman spectra of BPO were preprocessed by wavelet denoising. Optimal parameters of wavelet denoising were selected by the orthogonal experimental design. The signal-noise (S/N) ratio of the optimal parameter combination was 32.848. The smoothed Raman spectra were divided into three regions (1900-1300, 1300-700, and 700-100 cm-1) for assignment and the band vibrational modes of BPO molecule were obtained. Wherein, the Raman bands at 1771, 1597, 1230, 999, 889 and 845 cm-1 are higher than others, and can be used as the Raman characteristic bands. Analysis of the grayscale images corresponding to different characteristic bands, it is found that the order of change of the image gray level was consistent with characteristic bands intensity. Findings of this study provide the research basics for the detection and analysis of BPO additive.

  12. NIR hyperspectral imaging to evaluate degradation in captopril commercial tablets.

    PubMed

    França, Leandro de Moura; Pimentel, Maria Fernanda; Simões, Simone da Silva; Grangeiro, Severino; Prats-Montalbán, José M; Ferrer, Alberto

    2016-07-01

    Pharmaceutical quality control is important for improving the effectiveness, purity and safety of drugs, as well as for the prevention or control of drug degradation. In the present work, near infrared hyperspectral images (HSI-NIR) of tablets with different expiration dates were employed to evaluate the degradation of captopril into captopril disulfide in different layers, on the top and on the bottom surfaces of the tablets. Multivariate curve resolution (MCR) models were used to extract the concentration distribution maps from the hyperspectral images. Afterward, multivariate image techniques were applied to the concentration distribution maps (CDMs), to extract features and build models relating the main characteristics of the images to their corresponding manufacturing dates. Resolution methods followed by extracting features were able to estimate the tablet manufacture date with a prediction error of 120days. The model developed could be useful to evaluate whether a sample shows a degradation pattern consistent with the date of manufacturing or to detect abnormal behaviors in the natural degradation process of the sample. The information provided by the HIS-NIR is important for the development of the process (QbD), looking inside the formulation, revealing the behavior of the active pharmaceutical ingredient (API) during the product's shelf life. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. Review and Implementation of the Emerging CCSDS Recommended Standard for Multispectral and Hyperspectral Lossless Image Coding

    NASA Technical Reports Server (NTRS)

    Sanchez, Jose Enrique; Auge, Estanislau; Santalo, Josep; Blanes, Ian; Serra-Sagrista, Joan; Kiely, Aaron

    2011-01-01

    A new standard for image coding is being developed by the MHDC working group of the CCSDS, targeting onboard compression of multi- and hyper-spectral imagery captured by aircraft and satellites. The proposed standard is based on the "Fast Lossless" adaptive linear predictive compressor, and is adapted to better overcome issues of onboard scenarios. In this paper, we present a review of the state of the art in this field, and provide an experimental comparison of the coding performance of the emerging standard in relation to other state-of-the-art coding techniques. Our own independent implementation of the MHDC Recommended Standard, as well as of some of the other techniques, has been used to provide extensive results over the vast corpus of test images from the CCSDS-MHDC.

  14. Review and Implementation of the Emerging CCSDS Recommended Standard for Multispectral and Hyperspectral Lossless Image Coding

    NASA Technical Reports Server (NTRS)

    Sanchez, Jose Enrique; Auge, Estanislau; Santalo, Josep; Blanes, Ian; Serra-Sagrista, Joan; Kiely, Aaron

    2011-01-01

    A new standard for image coding is being developed by the MHDC working group of the CCSDS, targeting onboard compression of multi- and hyper-spectral imagery captured by aircraft and satellites. The proposed standard is based on the "Fast Lossless" adaptive linear predictive compressor, and is adapted to better overcome issues of onboard scenarios. In this paper, we present a review of the state of the art in this field, and provide an experimental comparison of the coding performance of the emerging standard in relation to other state-of-the-art coding techniques. Our own independent implementation of the MHDC Recommended Standard, as well as of some of the other techniques, has been used to provide extensive results over the vast corpus of test images from the CCSDS-MHDC.

  15. DLP hyperspectral imaging for surgical and clinical utility

    NASA Astrophysics Data System (ADS)

    Zuzak, Karel J.; Francis, Robert P.; Wehner, Eleanor F.; Smith, Jack; Litorja, Maritoni; Allen, David W.; Tracy, Chad; Cadeddu, Jeffrey; Livingston, Edward

    2009-02-01

    We describe a novel digital light processing, DLP hyperspectral imaging system for visualizing chemical composition of in vivo tissues during surgical procedures non-invasively and at near video rate. The novelty of the DLP hyperspectral imaging system resides in (1) its ability to conform light to rapidly sweep through a series of preprogrammed spectral illuminations as simple as a set of contiguous bandpasses to any number of complex spectra, and (2) processing the reflected spectroscopic image data using unique supervised and unsupervised chemometric methods that color encode molecular content of tissue at each image detector pixel providing an optical biopsy. Spectral illumination of tissue is accomplished utilizing a DLP® based spectral illuminator incorporating a series of bandpass spectra and measuring the reflectance image with a CCD array detector. Wavelength dependent images are post processed with a multivariate least squares analysis method using known reference spectra of oxy- and deoxyhemoglobin. Alternatively, illuminating with complex reference spectra reduces the number of spectral images required for generating chemically relevant images color encoded for relative percentage of oxyhemoglobin are collected and displayed in real time near-video rate, (3 to 4) frames per second (fps). As a proof of principle application, a kidney of an anesthetized pig was imaged before and after renal vasculature occlusion showing the clamped kidney to be 61% of the unclamped kidney percentage of oxyhemoglobin. Using the "3-Shot" spectral illumination method and gathering data at (3 to 4) fps shows a non-linear exponential de-oxygenation of hemoglobin reaching steady state within 30 seconds post occlusion.

  16. GPU implementation issues for fast unmixing of hyperspectral images

    NASA Astrophysics Data System (ADS)

    Legendre, Maxime; Capriotti, Luca; Schmidt, Frédéric; Moussaoui, Saïd; Schmidt, Albrecht

    2013-04-01

    Space missions usually use hyperspectral imaging techniques to analyse the composition of planetary surfaces. Missions such as ESA's Mars Express and Venus Express generate extensive datasets whose processing demands so far have exceeded the resources available to many researchers. To overcome this limitation, the challenge is to develop numerical methods allowing to exploit the potential of modern calculation tools. The processing of a hyperspectral image consists of the identification of the observed surface components and eventually the assessment of their fractional abundances inside each pixel area. In this latter case, the problem is referred to as spectral unmixing. This work focuses on a supervised unmixing approach where the relevant component spectra are supposed to be part of an available spectral library. Therefore, the question addressed here is reduced to the estimation of the fractional abundances, or abundance maps. It requires the solution of a large-scale optimization problem subject to linear constraints; positivity of the abundances and their partial/full additivity (sum less/equal to one). Conventional approaches to such a problem usually suffer from a high computational overhead. Recently, an interior-point optimization using a primal-dual approach has been proven an efficient method to solve this spectral unmixing problem at reduced computational cost. This is achieved with a parallel implementation based on Graphics Processing Units (GPUs). Several issues are discussed such as the data organization in memory and the strategy used to compute efficiently one global quantity from a large dataset in a parallel fashion. Every step of the algorithm is optimized to be GPU-efficient. Finally, the main steps of the global system for the processing of a large number of hyperspectral images are discussed. The advantage of using a GPU is demonstrated by unmixing a large dataset consisting of 1300 hyperspectral images from Mars Express' OMEGA instrument

  17. Red Blood Cell Count Automation Using Microscopic Hyperspectral Imaging Technology.

    PubMed

    Li, Qingli; Zhou, Mei; Liu, Hongying; Wang, Yiting; Guo, Fangmin

    2015-12-01

    Red blood cell counts have been proven to be one of the most frequently performed blood tests and are valuable for early diagnosis of some diseases. This paper describes an automated red blood cell counting method based on microscopic hyperspectral imaging technology. Unlike the light microscopy-based red blood count methods, a combined spatial and spectral algorithm is proposed to identify red blood cells by integrating active contour models and automated two-dimensional k-means with spectral angle mapper algorithm. Experimental results show that the proposed algorithm has better performance than spatial based algorithm because the new algorithm can jointly use the spatial and spectral information of blood cells.

  18. Characterization of Chromobacterium violaceum pigment through a hyperspectral imaging system

    PubMed Central

    2014-01-01

    In this paper, a comprehensive spatio-spectral and temporal analysis for Chromobacterium violaceum colonies is reported. A hyperspectral imaging (HSI) system is used to recover the spectral signatures of pigment production in a non-homogeneous media with high spectral resolution and high sensitivity in vivo, without destructing the sample. This non-contact sensing technique opens avenues to study the temporal growing of a specific section in the bacterial colony. Further, from a 580 [nm] and 764 [nm] spatio-spectral time series, a wild-type and mutant Chromobacterium violaceum strains are characterized. Such study provides quantitative information about kinetic parameters of pigment production and bacterial growing. PMID:24417877

  19. Classification of fecal contamination on leafy greens by hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Yang, Chun-Chieh; Jun, Won; Kim, Moon S.; Chao, Kaunglin; Kang, Sukwon; Chan, Diane E.; Lefcourt, Alan

    2010-04-01

    This paper reported the development of hyperspectral fluorescence imaging system using ultraviolet-A excitation (320-400 nm) for detection of bovine fecal contaminants on the abaxial and adaxial surfaces of romaine lettuce and baby spinach leaves. Six spots of fecal contamination were applied to each of 40 lettuce and 40 spinach leaves. In this study, the wavebands at 666 nm and 680 nm were selected by the correlation analysis. The two-band ratio, 666 nm / 680 nm, of fluorescence intensity was used to differentiate the contaminated spots from uncontaminated leaf area. The proposed method could accurately detect all of the contaminated spots.

  20. Application of novel hyperspectral imaging technologies in combat casualty care

    NASA Astrophysics Data System (ADS)

    Cancio, Leopoldo C.

    2010-02-01

    Novel hyperspectral imaging (HSI) methods may play several important roles in Combat Casualty Care: (1) HSI of the skin may provide spatial data on hemoglobin saturation of oxygen, as a "window" into perfusion during shock. (2) HSI or similar technology could be incorporated into closed-loop, feedback-controlled resuscitation systems. (3) HSI may provide information about tissue viability and/or wound infection. (4) HSI in the near-infrared range may provide information on the tissue water content--greatly affected, e.g., by fluid resuscitation. Thus, further refinements in the speed and size of HSI systems are sought to make these capabilities available on the battlefield.

  1. Surgical and clinical needs for DLP hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    Livingston, Edward H.

    2010-02-01

    Surgical technology advances slowly and only when there is overwhelming need for change. Change is resisted by surgeons and is made hard by FDA rules that inhibit innovation. There is a pressing need to improve surgeon's visualization of the operative field during laparoscopic surgery to minimize the risk for significant injury that can occur when surgeons are operating around delicate, hidden structures. We propose to use a Digital Light Processor-based hyperspectral imaging system to assist an operating surgeon's ability to see through tissues and identify otherwise hidden structures such as bile ducts during laparoscopic cholecystectomy.

  2. MCT-based SWIR hyperspectral imaging system for evaluation of biological samples

    NASA Astrophysics Data System (ADS)

    Hong, Seok Min; Lee, Hoonsoo; Baek, Insuck; Kim, Moon S.

    2016-05-01

    Hyperspectral imaging has been shown to be a powerful tool for nondestructive evaluation of biological samples. We recently developed a new line-scan-based shortwave infrared (SWIR) hyperspectral imaging system. Critical sensing components of the system include a SWIR spectrograph, an MCT (HgCdTe) array detector, and a custom-designed illumination source. The system has an effective imaging range from 900 nm to 2500 nm. In this paper, we present SWIR hyperspectral images of plant leaves and fruits, and preliminary SWIR image analysis results.

  3. Superpixel-based spectral classification for the detection of head and neck cancer with hyperspectral imaging

    PubMed Central

    Chung, Hyunkoo; Lu, Guolan; Tian, Zhiqiang; Wang, Dongsheng; Chen, Zhuo Georgia; Fei, Baowei

    2016-01-01

    Hyperspectral imaging (HSI) is an emerging imaging modality for medical applications. HSI acquires two dimensional images at various wavelengths. The combination of both spectral and spatial information provides quantitative information for cancer detection and diagnosis. This paper proposes using superpixels, principal component analysis (PCA), and support vector machine (SVM) to distinguish regions of tumor from healthy tissue. The classification method uses 2 principal components decomposed from hyperspectral images and obtains an average sensitivity of 93% and an average specificity of 85% for 11 mice. The hyperspectral imaging technology and classification method can have various applications in cancer research and management. PMID:27656035

  4. Full-frame, programmable hyperspectral imager

    DOEpatents

    Love, Steven P.; Graff, David L.

    2017-07-25

    A programmable, many-band spectral imager based on addressable spatial light modulators (ASLMs), such as micro-mirror-, micro-shutter- or liquid-crystal arrays, is described. Capable of collecting at once, without scanning, a complete two-dimensional spatial image with ASLM spectral processing applied simultaneously to the entire image, the invention employs optical assemblies wherein light from all image points is forced to impinge at the same angle onto the dispersing element, eliminating interplay between spatial position and wavelength. This is achieved, as examples, using telecentric optics to image light at the required constant angle, or with micro-optical array structures, such as micro-lens- or capillary arrays, that aim the light on a pixel-by-pixel basis. Light of a given wavelength then emerges from the disperser at the same angle for all image points, is collected at a unique location for simultaneous manipulation by the ASLM, then recombined with other wavelengths to form a final spectrally-processed image.

  5. Studies on image compression and image reconstruction

    NASA Technical Reports Server (NTRS)

    Sayood, Khalid; Nori, Sekhar; Araj, A.

    1994-01-01

    During this six month period our works concentrated on three, somewhat different areas. We looked at and developed a number of error concealment schemes for use in a variety of video coding environments. This work is described in an accompanying (draft) Masters thesis. In the thesis we describe application of this techniques to the MPEG video coding scheme. We felt that the unique frame ordering approach used in the MPEG scheme would be a challenge to any error concealment/error recovery technique. We continued with our work in the vector quantization area. We have also developed a new type of vector quantizer, which we call a scan predictive vector quantization. The scan predictive VQ was tested on data processed at Goddard to approximate Landsat 7 HRMSI resolution and compared favorably with existing VQ techniques. A paper describing this work is included. The third area is concerned more with reconstruction than compression. While there is a variety of efficient lossless image compression schemes, they all have a common property that they use past data to encode future data. This is done either via taking differences, context modeling, or by building dictionaries. When encoding large images, this common property becomes a common flaw. When the user wishes to decode just a portion of the image, the requirement that the past history be available forces the decoding of a significantly larger portion of the image than desired by the user. Even with intelligent partitioning of the image dataset, the number of pixels decoded may be four times the number of pixels requested. We have developed an adaptive scanning strategy which can be used with any lossless compression scheme and which lowers the additional number of pixels to be decoded to about 7 percent of the number of pixels requested! A paper describing these results is included.

  6. New hyperspectral difference water index for the extraction of urban water bodies by the use of airborne hyperspectral images

    NASA Astrophysics Data System (ADS)

    Xie, Huan; Luo, Xin; Xu, Xiong; Tong, Xiaohua; Jin, Yanmin; Pan, Haiyan; Zhou, Bingzhong

    2014-01-01

    Extracting surface land-cover types and analyzing changes are among the most common applications of remote sensing. One of the most basic tasks is to identify and map surface water boundaries. Spectral water indexes have been successfully used in the extraction of water bodies in multispectral images. However, directly applying a water index method to hyperspectral images disregards the abundant spectral information and involves difficulty in selecting appropriate spectral bands. It is also a challenge for a spectral water index to distinguish water from shadowed regions. The purpose of this study is therefore to develop an index that is suitable for water extraction by the use of hyperspectral images, and with the capability to mitigate the effects of shadow and low-albedo surfaces, especially in urban areas. Thus, we introduce a new hyperspectral difference water index (HDWI) to improve the water classification accuracy in areas that include shadow over water, shadow over other ground surfaces, and low-albedo ground surfaces. We tested the new method using PHI-2, HyMAP, and ROSIS hyperspectral images of Shanghai, Munich, and Pavia. The performance of the water index was compared with the normalized difference water index (NDWI) and the Mahalanobis distance classifier (MDC). With all three test images, the accuracy of HDWI was significantly higher than that of NDWI and MDC. Therefore, HDWI can be used for extracting water with a high degree of accuracy, especially in urban areas, where shadow caused by high buildings is an important source of classification error.

  7. Melanoma detection using smartphone and multimode hyperspectral imaging

    NASA Astrophysics Data System (ADS)

    MacKinnon, Nicholas; Vasefi, Fartash; Booth, Nicholas; Farkas, Daniel L.

    2016-04-01

    This project's goal is to determine how to effectively implement a technology continuum from a low cost, remotely deployable imaging device to a more sophisticated multimode imaging system within a standard clinical practice. In this work a smartphone is used in conjunction with an optical attachment to capture cross-polarized and collinear color images of a nevus that are analyzed to quantify chromophore distribution. The nevus is also imaged by a multimode hyperspectral system, our proprietary SkinSpect™ device. Relative accuracy and biological plausibility of the two systems algorithms are compared to assess aspects of feasibility of in-home or primary care practitioner smartphone screening prior to rigorous clinical analysis via the SkinSpect.

  8. Miniature infrared hyperspectral imaging sensor for airborne applications

    NASA Astrophysics Data System (ADS)

    Hinnrichs, Michele; Hinnrichs, Bradford; McCutchen, Earl

    2017-05-01

    Pacific Advanced Technology (PAT) has developed an infrared hyperspectral camera, both MWIR and LWIR, small enough to serve as a payload on a miniature unmanned aerial vehicles. The optical system has been integrated into the cold-shield of the sensor enabling the small size and weight of the sensor. This new and innovative approach to infrared hyperspectral imaging spectrometer uses micro-optics and will be explained in this paper. The micro-optics are made up of an area array of diffractive optical elements where each element is tuned to image a different spectral region on a common focal plane array. The lenslet array is embedded in the cold-shield of the sensor and actuated with a miniature piezo-electric motor. This approach enables rapid infrared spectral imaging with multiple spectral images collected and processed simultaneously each frame of the camera. This paper will present our optical mechanical design approach which results in an infrared hyper-spectral imaging system that is small enough for a payload on a mini-UAV or commercial quadcopter. The diffractive optical elements used in the lenslet array are blazed gratings where each lenslet is tuned for a different spectral bandpass. The lenslets are configured in an area array placed a few millimeters above the focal plane and embedded in the cold-shield to reduce the background signal normally associated with the optics. We have developed various systems using a different number of lenslets in the area array. Depending on the size of the focal plane and the diameter of the lenslet array will determine the spatial resolution. A 2 x 2 lenslet array will image four different spectral images of the scene each frame and when coupled with a 512 x 512 focal plane array will give spatial resolution of 256 x 256 pixel each spectral image. Another system that we developed uses a 4 x 4 lenslet array on a 1024 x 1024 pixel element focal plane array which gives 16 spectral images of 256 x 256 pixel resolution each

  9. Advanced Airborne Hyperspectral Imaging System (AAHIS): an imaging spectrometer for maritime applications

    NASA Astrophysics Data System (ADS)

    Voelker, Mark A.; Resmini, Ronald G.; Mooradian, Gregory C.; McCord, Thomas B.; Warren, Christopher P.; Fene, Michael W.; Coyle, Christopher C.; Anderson, Richard

    1995-06-01

    The Advanced Airborne Hyperspectral Imaging System (AAHIS) is a compact, lightweight visible and near IR pushbroom hyperspectral imaging spectrometer flown on a Piper Aztec aircraft. AAHIS is optimized for use in shallow water, littoral, and vegetation remote sensing. Data are collected at up to 55 frames/second and may be displayed and analyzed inflight or recorded for post-flight processing. Swath width is 200 meters at a flight altitude of 1 km. Each image pixel contains hyperspectral data simultaneously recorded in up to 288 contiguous spectral channels covering the 432 to 832 nm spectral region. Pixel binning typically yields pixels 1.0 meter square with a spectral channel width of 5.5 nm. Design and performance of the AAHIS is presented, including processed imagery demonstrating feature detection and materials discrimination on land and underwater at depths up to 27 meters.

  10. Absolute Calibration Accuracy for Hyperspectral Imagers in the Solar Reflective

    NASA Technical Reports Server (NTRS)

    Thome, Kurtis

    2009-01-01

    The characterization and calibration of hyperspectral imagers is a challenging one that is expected to become even more challenging as needs increase for highly-accurate radiometric data from such systems. The preflight calibration of the Advanced Responsive Tactically Effective Military Imaging Spectrometer (ARTEMIS) is used as an example of the difficulties to calibrate hyperspectrally. Results from a preflight solar radiation-based calibration are presented with a discussion of the uncertainties in such a method including the NISI-traceable and SItraceable aspects. Expansion on the concept of solar-based calibration is given with descriptions of methods that view the solar disk directly, illuminate a solar diffuser that is part of the sensor's inflight calibration, and illuminate an external diffuser that is imaged by the sensor. The results of error analysis show that it is feasible to achieve preflight calibration using the sun as a source at the same level of uncertainty as those of lamp-based approaches. The error analysis is evaluated and verified through the solar-radiation-based calibration of several of laboratory grade radiometers. Application of these approaches to NASA's upcoming CLARREO mission are discussed including proposed methods for significantly reducing the uncertainties to allow CLARREO data to be used for climate data records.

  11. Detecting pits in tart cherries by hyperspectral transmission imaging

    NASA Astrophysics Data System (ADS)

    Qin, Jianwei; Lu, Renfu

    2004-11-01

    The presence of pits in processed cherry products causes safety concerns for consumers and imposes potential liability for the food industry. The objective of this research was to investigate a hyperspectral transmission imaging technique for detecting the pit in tart cherries. A hyperspectral imaging system was used to acquire transmission images from individual cherry fruit for four orientations before and after pits were removed over the spectral region between 450 nm and 1,000 nm. Cherries of three size groups (small, intermediate, and large), each with two color classes (light red and dark red) were used for determining the effect of fruit orientation, size, and color on the pit detection accuracy. Additional cherries were studied for the effect of defect (i.e., bruises) on the pit detection. Computer algorithms were developed using the neural network (NN) method to classify the cherries with and without the pit. Two types of data inputs, i.e., single spectra and selected regions of interest (ROIs), were compared. The spectral region between 690 nm and 850 nm was most appropriate for cherry pit detection. The NN with inputs of ROIs achieved higher pit detection rates ranging from 90.6% to 100%, with the average correct rate of 98.4%. Fruit orientation and color had a small effect (less than 1%) on pit detection. Fruit size and defect affected pit detection and their effect could be minimized by training the NN with properly selected cherry samples.

  12. NIR DLP hyperspectral imaging system for medical applications

    NASA Astrophysics Data System (ADS)

    Wehner, Eleanor; Thapa, Abhas; Livingston, Edward; Zuzak, Karel

    2011-03-01

    DLP® hyperspectral reflectance imaging in the visible range has been previously shown to quantify hemoglobin oxygenation in subsurface tissues, 1 mm to 2 mm deep. Extending the spectral range into the near infrared reflects biochemical information from deeper subsurface tissues. Unlike any other illumination method, the digital micro-mirror device, DMD, chip is programmable, allowing the user to actively illuminate with precisely predetermined spectra of illumination with a minimum bandpass of approximately 10 nm. It is possible to construct active spectral-based illumination that includes but is not limited to containing sharp cutoffs to act as filters or forming complex spectra, varying the intensity of light at discrete wavelengths. We have characterized and tested a pure NIR, 760 nm to 1600 nm, DLP hyperspectral reflectance imaging system. In its simplest application, the NIR system can be used to quantify the percentage of water in a subject, enabling edema visualization. It can also be used to map vein structure in a patient in real time. During gall bladder surgery, this system could be invaluable in imaging bile through fatty tissue, aiding surgeons in locating the common bile duct in real time without injecting any contrast agents.

  13. Oil Adulteration Identification by Hyperspectral Imaging Using QHM and ICA

    PubMed Central

    Han, Zhongzhi; Wan, Jianhua; Deng, Limiao; Liu, Kangwei

    2016-01-01

    To investigate the feasibility of identification of qualified and adulterated oil product using hyperspectral imaging(HIS) technique, a novel feature set based on quantized histogram matrix (QHM) and feature selection method using improved kernel independent component analysis (iKICA) is proposed for HSI. We use UV and Halogen excitations in this study. Region of interest(ROI) of hyperspectral images of 256 oil samples from four varieties are obtained within the spectral region of 400–720nm. Radiation indexes extracted from each ROI are used as feature vectors. These indexes are individual band radiation index (RI), difference of consecutive spectral band radiation index (DRI), ratio of consecutive spectral band radiation index (RRI) and normalized DRI (NDRI). Another set of features called quantized histogram matrix (QHM) are extracted by applying quantization on the image histogram from these features. Based on these feature sets, improved kernel independent component analysis (iKICA) is used to select significant features. For comparison, algorithms such as plus L reduce R (plusLrR), Fisher, multidimensional scaling (MDS), independent component analysis (ICA), and principle component analysis (PCA) are also used to select the most significant wavelengths or features. Support vector machine (SVM) is used as the classifier. Experimental results show that the proposed methods are able to obtain robust and better classification performance with fewer number of spectral bands and simplify the design of computer vision systems. PMID:26820311

  14. A novel highly parallel algorithm for linearly unmixing hyperspectral images

    NASA Astrophysics Data System (ADS)

    Guerra, Raúl; López, Sebastián.; Callico, Gustavo M.; López, Jose F.; Sarmiento, Roberto

    2014-10-01

    Endmember extraction and abundances calculation represent critical steps within the process of linearly unmixing a given hyperspectral image because of two main reasons. The first one is due to the need of computing a set of accurate endmembers in order to further obtain confident abundance maps. The second one refers to the huge amount of operations involved in these time-consuming processes. This work proposes an algorithm to estimate the endmembers of a hyperspectral image under analysis and its abundances at the same time. The main advantage of this algorithm is its high parallelization degree and the mathematical simplicity of the operations implemented. This algorithm estimates the endmembers as virtual pixels. In particular, the proposed algorithm performs the descent gradient method to iteratively refine the endmembers and the abundances, reducing the mean square error, according with the linear unmixing model. Some mathematical restrictions must be added so the method converges in a unique and realistic solution. According with the algorithm nature, these restrictions can be easily implemented. The results obtained with synthetic images demonstrate the well behavior of the algorithm proposed. Moreover, the results obtained with the well-known Cuprite dataset also corroborate the benefits of our proposal.

  15. Construction of a small and lightweight hyperspectral imaging system

    NASA Astrophysics Data System (ADS)

    Vogel, Britta; Hünniger, Dirk; Bastian, Georg

    2014-05-01

    The analysis of the reflected sunlight offers great opportunity to gain information about the environment, including vegetation and soil. In the case of plants the wavelength ratio of the reflected light usually undergoes a change if the state of growth or state of health changes. So the measurement of the reflected light allows drawing conclusions about the state of, amongst others, vegetation. Using a hyperspectral imaging system for data acquisition leads to a large dataset, which can be evaluated with respect to several different questions to obtain various information by one measurement. Based on commercially available plain optical components we developed a small and lightweight hyperspectral imaging system within the INTERREG IV A-Project SMART INSPECTORS. The project SMART INSPECTORS [Smart Aerial Test Rigs with Infrared Spectrometers and Radar] deals with the fusion of airborne visible and infrared imaging remote sensing instruments and wireless sensor networks for precision agriculture and environmental research. A high performance camera was required in terms of good signal, good wavelength resolution and good spatial resolution, while severe constraints of size, proportions and mass had to be met due to the intended use on small unmanned aerial vehicles. The detector was chosen to operate without additional cooling. The refractive and focusing optical components were identified by supporting works with an optical raytracing software and a self-developed program. We present details of design and construction of our camera system, test results to confirm the optical simulation predictions as well as our first measurements.

  16. Near infrared hyperspectral imaging system for root phenotyping

    NASA Astrophysics Data System (ADS)

    Arnold, Thomas; Leitner, Raimund; Bodner, Gernot

    2017-05-01

    This paper presents the development and application of a hyper-spectral imaging system for root phenotyping. For sustainable plant production root systems optimized for growing conditions in the field are required. Therefore, the presented system is used for the research in the field of plant drought resistance. The system is used to acquire spatially resolved near infrared (NIR) spectroscopy data of rhizoboxes. In contrast to using visible light (380 nm-780 nm) the NIR wavelength range (900 nm-1700 nm) allows to discriminate essential features for the root segmentation and water distribution mappings. The increased image contrast in the NIR range allows roots to be segmented from soil and additional information, e.g. basic root-architecture, to be extracted. In addition, the water absorption bands in the NIR wavelength range can be used to determine the water content and to estimate the age of the roots. In this paper the hardware setup of the hyper-spectral root imaging system, the data analysis, the soil water content estimations and the root segmentation using different methods to optimize separation between roots and soil, both constituting complex materials of variable properties, are presented.

  17. a Spatio-Spectral Camera for High Resolution Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Livens, S.; Pauly, K.; Baeck, P.; Blommaert, J.; Nuyts, D.; Zender, J.; Delauré, B.

    2017-08-01

    Imaging with a conventional frame camera from a moving remotely piloted aircraft system (RPAS) is by design very inefficient. Less than 1 % of the flying time is used for collecting light. This unused potential can be utilized by an innovative imaging concept, the spatio-spectral camera. The core of the camera is a frame sensor with a large number of hyperspectral filters arranged on the sensor in stepwise lines. It combines the advantages of frame cameras with those of pushbroom cameras. By acquiring images in rapid succession, such a camera can collect detailed hyperspectral information, while retaining the high spatial resolution offered by the sensor. We have developed two versions of a spatio-spectral camera and used them in a variety of conditions. In this paper, we present a summary of three missions with the in-house developed COSI prototype camera (600-900 nm) in the domains of precision agriculture (fungus infection monitoring in experimental wheat plots), horticulture (crop status monitoring to evaluate irrigation management in strawberry fields) and geology (meteorite detection on a grassland field). Additionally, we describe the characteristics of the 2nd generation, commercially available ButterflEYE camera offering extended spectral range (475-925 nm), and we discuss future work.

  18. Absolute Calibration Accuracy for Hyperspectral Imagers in the Solar Reflective

    NASA Technical Reports Server (NTRS)

    Thome, Kurtis

    2009-01-01

    The characterization and calibration of hyperspectral imagers is a challenging one that is expected to become even more challenging as needs increase for highly-accurate radiometric data from such systems. The preflight calibration of the Advanced Responsive Tactically Effective Military Imaging Spectrometer (ARTEMIS) is used as an example of the difficulties to calibrate hyperspectrally. Results from a preflight solar radiation-based calibration are presented with a discussion of the uncertainties in such a method including the NISI-traceable and SItraceable aspects. Expansion on the concept of solar-based calibration is given with descriptions of methods that view the solar disk directly, illuminate a solar diffuser that is part of the sensor's inflight calibration, and illuminate an external diffuser that is imaged by the sensor. The results of error analysis show that it is feasible to achieve preflight calibration using the sun as a source at the same level of uncertainty as those of lamp-based approaches. The error analysis is evaluated and verified through the solar-radiation-based calibration of several of laboratory grade radiometers. Application of these approaches to NASA's upcoming CLARREO mission are discussed including proposed methods for significantly reducing the uncertainties to allow CLARREO data to be used for climate data records.

  19. Joint Multiframe Blind Deconvolution and Spectral Unmixing of Hyperspectral Images

    NASA Astrophysics Data System (ADS)

    Zhang, P.; Pauca, V. P.; Plemmons, R. J.

    2013-09-01

    Our interest here is spectral imaging for space object identification based upon imaging using simultaneous measurements at different wavelengths. AMOS sensors can collect simultaneous images ranging from visible to LWIR. On the other hand, multiframe blind deconvolution (MFBD) has demonstrated success by acquiring near-simultaneous multiple images for reconstructing space objects, and another success has been shown through adding phase diversity (PD) by splitting the light beam in channels with different phase functions. So far, most MFBD and PD applications have been focused on monochromatic images, with a few MFBD studies on multispectral images, also called the wavelength diversity. In particular, B. Calef has shown that wavelength-diverse MFBD is a promising technique for combining data from multiple sensors to yield a higher-quality reconstructed image. Here, we present optimization algorithms to blindly deconvolve observed blurred and noisy hyperspectral images with phase diversity at each wavelength channel. We use the facts that at longer wavelengths, turbulence effects on the phase are less severe, while diffraction effects at shorter wavelengths are less severe. Moreover, because the blurring kernels of all wavelength channels essentially share the same optimal path difference (OPD) function, we have greatly reduced the number of parameters in the blurring kernel. We model the true hyperspectral object by a linear spectral unmixing model, which reduces the number of pixels to be recovered. Because the number of known parameters is far greater than the number of unknowns, the method enjoys an enhanced capability of successful reconstruction. We simultaneously reconstruct the true object, estimate the blurring kernels, and separate the object into spectrally homogeneous segments, each characterized by its support and spectral signature, an important step for analyzing the material compositions of space objects.

  20. Hyperspectral imaging of UVR effects on fungal spectrum

    NASA Astrophysics Data System (ADS)

    Hruska, Zuzana; Yao, Haibo; DiCrispino, Kevin; Brabham, Kori; Lewis, David; Beach, Jim; Brown, Robert L.; Cleveland, Thomas E.

    2005-08-01

    The present report evaluated ultraviolet radiation (UVR) effects on the spectral signature of mycotoxin producing fungus Aspergillus flavus (A. flavus). Ultraviolet radiation has long been used to reduce microbe contamination and to inactivate mold spores. In view of the known effects of UVR on microorganisms, and because certain spectral bands in the signature of some fungi may be in the UV range, it is important to know the maximum acceptable limit of UVR exposure that does not significantly alter the fungal spectral signature and affect detection accuracy. A visible-near-infrared (VNIR) hyperspectral imaging system using focal plane pushbroom scanning for high spatial and spectral resolution imaging was utilized to detect any changes. A. flavus cultures were grown for 5 days and imaged after intermittent or continuous UVR treatment. The intermittent group was treated at 1-minute intervals for 10 minutes, and VNIR images were taken after each UVR treatment. The continuous group was irradiated for 10 minutes and imaged before and after treatment. A control sample group did not undergo UVR treatment, but was also imaged at 1-minute intervals for 10 minutes in the same manner as the intermittent group. Before and after UVR treatment, mean fungal sample reflectance was obtained through spatial subset of the image along with standard deviation and pre- and post-treatment reflectance was compared for each sample. Results show significant difference between the reflectances of treated and control A. flavus cultures after 10 min of UV radiation. Aditionally, the results demonstrate that even lethal doses of UVR do not immediately affect the spectral signature of A. flavus cultures suggesting that the excitation UV light source used in the present experiment may be safe to use with the UV hyperspectral imaging system when exposure time falls below 10 min.

  1. Image Compression: Making Multimedia Publishing a Reality.

    ERIC Educational Resources Information Center

    Anson, Louisa

    1993-01-01

    Describes the new Fractal Transform technology, a method of compressing digital images to represent images as seen by the mind's eye. The International Organization for Standardization (ISO) standards for compressed image formats are discussed in relationship to Fractal Transform, and it is compared with Discrete Cosine Transform. Thirteen figures…

  2. Image Compression: Making Multimedia Publishing a Reality.

    ERIC Educational Resources Information Center

    Anson, Louisa

    1993-01-01

    Describes the new Fractal Transform technology, a method of compressing digital images to represent images as seen by the mind's eye. The International Organization for Standardization (ISO) standards for compressed image formats are discussed in relationship to Fractal Transform, and it is compared with Discrete Cosine Transform. Thirteen figures…

  3. [Hyperspectral image classification based on 3-D gabor filter and support vector machines].

    PubMed

    Feng, Xiao; Xiao, Peng-feng; Li, Qi; Liu, Xiao-xi; Wu, Xiao-cui

    2014-08-01

    A three-dimensional Gabor filter was developed for classification of hyperspectral remote sensing image. This method is based on the characteristics of hyperspectral image and the principle of texture extraction with 2-D Gabor filters. Three-dimensional Gabor filter is able to filter all the bands of hyperspectral image simultaneously, capturing the specific responses in different scales, orientations, and spectral-dependent properties from enormous image information, which greatly reduces the time consumption in hyperspectral image texture extraction, and solve the overlay difficulties of filtered spectrums. Using the designed three-dimensional Gabor filters in different scales and orientations, Hyperion image which covers the typical area of Qi Lian Mountain was processed with full bands to get 26 Gabor texture features and the spatial differences of Gabor feature textures corresponding to each land types were analyzed. On the basis of automatic subspace separation, the dimensions of the hyperspectral image were reduced by band index (BI) method which provides different band combinations for classification in order to search for the optimal magnitude of dimension reduction. Adding three-dimensional Gabor texture features successively according to its discrimination to the given land types, supervised classification was carried out with the classifier support vector machines (SVM). It is shown that the method using three-dimensional Gabor texture features and BI band selection based on automatic subspace separation for hyperspectral image classification can not only reduce dimensions; but also improve the classification accuracy and efficiency of hyperspectral image.

  4. SETA-Hyperspectral Imaging Spectrometer for Marco Polo mission.

    NASA Astrophysics Data System (ADS)

    de Sanctis, M. Cristina; Filacchione, Gianrico; Capaccioni, Fabrizio; Piccioni, Giuseppe; Ammannito, Eleonora; Capria, M. Teresa; Coradini, Angioletta; Migliorini, Alessandra; Battistelli, Enrico; Preti, Giampaolo

    2010-05-01

    The Marco Polo NEO sample return M-class mission has been selected for assessment study within the ESA Cosmic Vision 2015-2025 program. The Marco Polo mission proposes to do a sample return mission to Near Earth Asteroid. With this mission we have the opportunity to return for study in Earth-based laboratories a direct sample of the earliest record of how our solar system formed. The landing site and sample selection will be the most important scientific decision to make during the course of the entire mission. The imaging spectrometer is a key instrument being capable to characterize the mineralogical composition of the entire asteroid and to analyze the of the landing site and the returned sample in its own native environment. SETA is a Hyperspectral Imaging Spectrometer able to perform imaging spectroscopy in the spectral range 400-3300 nm for a complete mapping of the target in order to characterize the mineral properties of the surface. The spectral sampling is of at least 20 nm and the spatial resolution of the order of meter. SETA shall be able to return a detailed determination of the mineralogical composition for the different geologic units as well as the overall surface mineralogy with a spatial resolution of the order of few meters. These compositional characterizations involve the analysis of spectral parameters that are diagnostic of the presence and composition of various mineral species and materials that may be present on the target body. Most of the interesting minerals have electronic and vibrational absorption features in their VIS-NIR reflectance spectra. The SETA design is based on a pushbroom imaging spectrometer operating in the 400-3300 nm range, using a 2D array HgCdTe detector. This kind of instrument allows a simultaneous measurement of a full spectrum taken across the field of view defined by the slit's axis (samples). The second direction (lines) of the hyperspectral image shall be obtained by using the relative motion of the orbiter

  5. Platforms for hyperspectral imaging, in-situ optical and acoustical imaging in urbanized regions

    NASA Astrophysics Data System (ADS)

    Bostater, Charles R.; Oney, Taylor

    2016-10-01

    Hyperspectral measurements of the water surface of urban coastal waters are presented. Oblique bidirectional reflectance factor imagery was acquired made in a turbid coastal sub estuary of the Indian River Lagoon, Florida and along coastal surf zone waters of the nearby Atlantic Ocean. Imagery was also collected using a pushbroom hyperspectral imager mounted on a fixed platform with a calibrated circular mechatronic rotation stage. Oblique imagery of the shoreline and subsurface features clearly shows subsurface bottom features and rip current features within the surf zone water column. In-situ hyperspectral optical signatures were acquired from a vessel as a function of depth to determine the attenuation spectrum in Palm Bay. A unique stationary platform methodology to acquire subsurface acoustic images showing the presence of moving bottom boundary nephelometric layers passing through the acoustic fan beam. The acoustic fan beam imagery indicated the presence of oscillatory subsurface waves in the urbanized coastal estuary. Hyperspectral imaging using the fixed platform techniques are being used to collect hyperspectral bidirectional reflectance factor (BRF) measurements from locations at buildings and bridges in order to provide new opportunities to advance our scientific understanding of aquatic environments in urbanized regions.

  6. Mid-infrared hyperspectral imaging of painting materials

    NASA Astrophysics Data System (ADS)

    Rosi, Francesca; Harig, Roland; Miliani, Costanza; Braun, René; Sali, Diego; Daveri, Alessia; Brunetti, Brunetto G.; Sgamellotti, Antonio

    2013-05-01

    A novel hyperspectral imaging system (HI90, Bruker Optics), working in the mid-infrared range and recently developed for the re