Sample records for coral diploria labyrinthiformis

  1. 50 CFR Appendix A to Part 622 - Species Tables

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Cladocora arbuscula, Tube coral Colpophyllia natans, Boulder coral Diploria clivosa, Knobby brain coral D. labyrinthiformis, Grooved brain D. strigosa, Symmetrical brain Favia fragum, Golfball coral Manicina areolata, Rose...

  2. Impacts of temperature increase and acidification on thickness of the surface mucopolysaccharide layer of the Caribbean coral Diploria spp.

    NASA Astrophysics Data System (ADS)

    Pratte, Zoe A.; Richardson, Laurie L.

    2014-06-01

    Coral mechanisms of resilience and resistance to stressors such as increasing sea surface temperature and ocean acidification must first be understood in order to facilitate the survival of coral reefs as we know them. One such mechanism is production of the protective surface mucopolysaccharide layer (SML). In this study, we investigated changes in the thickness of the SML in response to increasing temperature and acidification for the three Caribbean scleractinian coral species of the genus Diploria, which have been shown to exhibit differential resilience to disease and bleaching. Among the three species, Diploria strigosa is known to have a higher susceptibility to disease, Diploria labyrinthiformis is known to bleach more quickly, and Diploria clivosa is relatively unstudied. When temperature was increased from 25 to 31 °C over a 1- or 6-week period, the overall thickness of the SML decreased from 33 to 55 % for all three species. Average SML thickness at 25 °C for all three species ranged from 106 to 156 μm, while average thickness at 31 °C ranged from 64 to 86 μm. SML thickness was significantly different among species at 25 °C, but not at 31 °C. D. labyrinthiformis demonstrated lower fragment mortality due to thermal stress when compared to the other Diploria species. Acidification from pH 8.2 to 7.7 over 5 weeks had no effect on SML thickness for any species. The observed decrease in SML thickness in response to increased temperature might be attributed to a decrease in the production of mucus or an increase in the viscosity of the SML. These findings may help to explain the increased prevalence of coral disease during the warmer months, since increased temperature compromises an important aspect of coral innate immunity, as well as differences in disease and bleaching susceptibilities between Diploria species.

  3. The reproductive biology and early life ecology of a common Caribbean brain coral, Diploria labyrinthiformis (Scleractinia: Faviinae)

    NASA Astrophysics Data System (ADS)

    Chamberland, Valérie F.; Snowden, Skylar; Marhaver, Kristen L.; Petersen, Dirk; Vermeij, Mark J. A.

    2017-03-01

    Despite the fact that most of the severe demographic bottlenecks in coral populations occur during their earliest life stages, information on the reproductive biology and early life history traits of many coral species is limited and often inferred from adult traits only. This study reports on several atypical aspects of the reproductive biology and early life ecology of the grooved brain coral, Diploria labyrinthiformis (Linnaeus, 1758), a conspicuous reef-building species on Caribbean reefs. The timing of gamete release of D. labyrinthiformis was monitored in Curaçao over eight consecutive months, and embryogenesis, planulae behavior, and settlement rates were observed and quantified. We further studied growth and symbiont acquisition in juvenile D. labyrinthiformis for 3.5 yr and compared settler survival under ambient and nutrient-enriched conditions in situ. Notably, D. labyrinthiformis reproduced during daylight hours in six consecutive monthly spawning events between May and September 2013, with a peak in June. This is the largest number of reproductive events per year ever observed in a broadcast-spawning Caribbean coral species. In settlement experiments, D. labyrinthiformis planulae swam to the bottom of culture containers 13 h after spawning and rapidly settled when provided with settlement cues (42% within 14 h). After 5 months, the survival and growth rates of settled juveniles were 3.7 and 1.9 times higher, respectively, for settlers that acquired zooxanthellae within 1 month after settlement, compared to those that acquired symbionts later on. Nutrient enrichment increased settler survival fourfold, but only for settlers that had acquired symbionts within 1 month after settlement. With at least six reproductive events per year, a short planktonic larval phase, high settlement rates, and a positive response to nutrient enrichment, the broadcast-spawning species D. labyrinthiformis displays a range of reproductive and early life-history traits that are more often associated with brooding coral species, illustrating that classical divisions of coral species by reproductive mode alone do not always reflect the true biology and ecology of their earliest life stages.

  4. The roles of temperature and light in black band disease (BBD) progression on corals of the genus Diploria in Bermuda.

    PubMed

    Kuehl, Kristin; Jones, Ross; Gibbs, David; Richardson, Laurie

    2011-03-01

    On Bermuda reefs the brain coral Diploria labyrinthiformis is rarely documented with black band disease (BBD), while BBD-affected colonies of Diploria strigosa are common. D. labyrinthiformis on these reefs may be more resistant to BBD or less affected by prevailing environmental conditions that potentially diminish host defenses. To determine whether light and/or temperature influence BBD differently on these two species, infection experiments were conducted under the following experimental treatments: (1) 26 °C, ambient light; (2) 30 °C, ambient light; (3) 30 °C, low light; and (4) 30 °C, high light. A digital photograph of the affected area of each coral was taken each day for 7 days and analyzed with ImageJ image processing software. The final affected area was not significantly different between species in any of the four treatments. BBD lesions were smaller on both species infected under ambient light at 26 °C versus 30 °C. Low light at 30 °C significantly reduced the lesion size on both species when compared to colonies infected at the same temperature under ambient light. Under high light at 30 °C, BBD lesions were larger on colonies of D. strigosa and smaller on colonies of D. labyrinthiformis when compared to colonies infected under ambient light at the same temperature. The responses of both species suggests that BBD progression on both D. strigosa and D. labyrinthiformis is similarly influenced by a combination of light and temperature and that other factors present before infections become established likely contribute to the difference in BBD prevalence in Bermuda. Copyright © 2010 Elsevier Inc. All rights reserved.

  5. Recovery of temperature records from slow-growing corals by fine scale sampling of skeletons

    NASA Astrophysics Data System (ADS)

    Cohen, Anne L.; Thorrold, Simon R.

    2007-09-01

    We used laser ablation inductively coupled plasma mass spectrometry (LA ICP-MS) to analyze Sr/Ca ratios in 5 colonies of the Atlantic corals, Diploria labyrinthiformis and Montastrea franski, each growing less than 5 mm yr-1. By targeting the centers of septa we avoided thickening deposits to achieve an analytical sampling resolution of 5-10 days. The sensitivity of Sr/Ca to temperature (-0.096 mmol/mol/°C) is ˜3 times higher than previously reported for these species and equivalent to that exhibited by fast-growing Porites corals from the Indo-Pacific. The Sr/Ca-sea surface temperature (SST) calibrations derived from these corals were not statistically different and were independent of colony growth rate over the period studied. Data from 4 D. labyrinthiformis colonies were pooled to produce a single Sr/Ca-SST calibration with a calculated standard error on the predicted ocean temperature of ±0.51°C. Applying our calibration to Sr/Ca analyses of D. labyrinthiformis skeleton deposited in the late 18th century indicated that average annual sea surface temperatures around Bermuda were ˜1°C cooler than today.

  6. Environmental controls on modern scleractinian coral and reef-scale calcification.

    PubMed

    Courtney, Travis A; Lebrato, Mario; Bates, Nicholas R; Collins, Andrew; de Putron, Samantha J; Garley, Rebecca; Johnson, Rod; Molinero, Juan-Carlos; Noyes, Timothy J; Sabine, Christopher L; Andersson, Andreas J

    2017-11-01

    Modern reef-building corals sustain a wide range of ecosystem services because of their ability to build calcium carbonate reef systems. The influence of environmental variables on coral calcification rates has been extensively studied, but our understanding of their relative importance is limited by the absence of in situ observations and the ability to decouple the interactions between different properties. We show that temperature is the primary driver of coral colony ( Porites astreoides and Diploria labyrinthiformis ) and reef-scale calcification rates over a 2-year monitoring period from the Bermuda coral reef. On the basis of multimodel climate simulations (Coupled Model Intercomparison Project Phase 5) and assuming sufficient coral nutrition, our results suggest that P. astreoides and D. labyrinthiformis coral calcification rates in Bermuda could increase throughout the 21st century as a result of gradual warming predicted under a minimum CO 2 emissions pathway [representative concentration pathway (RCP) 2.6] with positive 21st-century calcification rates potentially maintained under a reduced CO 2 emissions pathway (RCP 4.5). These results highlight the potential benefits of rapid reductions in global anthropogenic CO 2 emissions for 21st-century Bermuda coral reefs and the ecosystem services they provide.

  7. Environmental controls on modern scleractinian coral and reef-scale calcification

    PubMed Central

    Courtney, Travis A.; Lebrato, Mario; Bates, Nicholas R.; Collins, Andrew; de Putron, Samantha J.; Garley, Rebecca; Johnson, Rod; Molinero, Juan-Carlos; Noyes, Timothy J.; Sabine, Christopher L.; Andersson, Andreas J.

    2017-01-01

    Modern reef-building corals sustain a wide range of ecosystem services because of their ability to build calcium carbonate reef systems. The influence of environmental variables on coral calcification rates has been extensively studied, but our understanding of their relative importance is limited by the absence of in situ observations and the ability to decouple the interactions between different properties. We show that temperature is the primary driver of coral colony (Porites astreoides and Diploria labyrinthiformis) and reef-scale calcification rates over a 2-year monitoring period from the Bermuda coral reef. On the basis of multimodel climate simulations (Coupled Model Intercomparison Project Phase 5) and assuming sufficient coral nutrition, our results suggest that P. astreoides and D. labyrinthiformis coral calcification rates in Bermuda could increase throughout the 21st century as a result of gradual warming predicted under a minimum CO2 emissions pathway [representative concentration pathway (RCP) 2.6] with positive 21st-century calcification rates potentially maintained under a reduced CO2 emissions pathway (RCP 4.5). These results highlight the potential benefits of rapid reductions in global anthropogenic CO2 emissions for 21st-century Bermuda coral reefs and the ecosystem services they provide. PMID:29134196

  8. [Effect of herbivorous and corallivorous fishes on the survival of transplanted corals in the Colombian Caribbean].

    PubMed

    Chasqui-Velasco, Luis; Alvarado Ch, Elvira; Acero, Arturo; Zapata, Fernando A

    2007-01-01

    To examine the effects of herbivorous and corallivorous fishes on the survival of transplanted colonies of Montastraea annularis, Diploria labyrinthiformis and Porites astreoides, both transplanted and native colonies were full-cage enclosed and compared to open (uncaged) colonies, while caging effects were assessed with a partial-cage (roof treatment). To evaluate if transplant stress increased the corals availability to fish predation, comparisons of fish foraging intensity among transplanted versus native colonies were made. To determine the density of herbivorous and corallivorous fishes on the transplants area visual censuses were made. The transient herbivorous fishes (Scaridae and Acanthuridae) were the most abundant fishes, and the corallivorous fishes (mainly Chaetodontidae) were the scarcest. A negative effect of territorial herbivorous fishes on M annularis transplants survival was observed, mainly early on the study. Fish foraging intensity was similar on transplanted and native colonies, but differed among coral species, being lowest on D. labyrinthiformis. Fast macroalgal growth inside full-cages due to reduced fish grazing was observed. This caused partial bleaching and partial mortality in some colonies, mainly of P. astreoides. No significant difference in healthy tissue percentages among full-cage and uncaged colonies on M. annularis and D. labyrinthiformis was found, while in P. astreoides there were evilent differences. The results indicate a damselfish negative effect on transplants survival early on the study, which can change depending on the fish and coral species involved. Results also indicate a fish grazing positive effect, caused by the reduction of coral-algae competition pressure, mainly on P. astreoides. Parrotfishes seem to affect corals survival both negatively through direct biting, and positively by controlling algal growth. Overall, coral transplant success was almost unaffected by fish foraging activity although several differences among coral species were obvious in relation to colony shape. Additionally, the interaction among herbivorous fish grazing and coral-algae competition balance appear important in determining transplant survival.

  9. Unprecedented Disease-Related Coral Mortality in Southeastern Florida

    NASA Astrophysics Data System (ADS)

    Precht, William F.; Gintert, Brooke E.; Robbart, Martha L.; Fura, Ryan; van Woesik, Robert

    2016-08-01

    Anomalously high water temperatures, associated with climate change, are increasing the global prevalence of coral bleaching, coral diseases, and coral-mortality events. Coral bleaching and disease outbreaks are often inter-related phenomena, since many coral diseases are a consequence of opportunistic pathogens that further compromise thermally stressed colonies. Yet, most coral diseases have low prevalence (<5%), and are not considered contagious. By contrast, we document the impact of an extremely high-prevalence outbreak (61%) of white-plague disease at 14 sites off southeastern Florida. White-plague disease was observed near Virginia Key, Florida, in September 2014, and after 12 months had spread 100 km north and 30 km south. The disease outbreak directly followed a high temperature coral-bleaching event and affected at least 13 coral species. Eusmilia fastigiata, Meandrina meandrites, and Dichocoenia stokesi were the most heavily impacted coral species, and were reduced to <3% of their initial population densities. A number of other coral species, including Colpophyllia natans, Pseudodiploria strigosa, Diploria labyrinthiformis, and Orbicella annularis were reduced to <25% of their initial densities. The high prevalence of disease, the number of susceptible species, and the high mortality of corals affected suggests this disease outbreak is arguably one of the most lethal ever recorded on a contemporary coral reef.

  10. Unprecedented Disease-Related Coral Mortality in Southeastern Florida.

    PubMed

    Precht, William F; Gintert, Brooke E; Robbart, Martha L; Fura, Ryan; van Woesik, Robert

    2016-08-10

    Anomalously high water temperatures, associated with climate change, are increasing the global prevalence of coral bleaching, coral diseases, and coral-mortality events. Coral bleaching and disease outbreaks are often inter-related phenomena, since many coral diseases are a consequence of opportunistic pathogens that further compromise thermally stressed colonies. Yet, most coral diseases have low prevalence (<5%), and are not considered contagious. By contrast, we document the impact of an extremely high-prevalence outbreak (61%) of white-plague disease at 14 sites off southeastern Florida. White-plague disease was observed near Virginia Key, Florida, in September 2014, and after 12 months had spread 100 km north and 30 km south. The disease outbreak directly followed a high temperature coral-bleaching event and affected at least 13 coral species. Eusmilia fastigiata, Meandrina meandrites, and Dichocoenia stokesi were the most heavily impacted coral species, and were reduced to <3% of their initial population densities. A number of other coral species, including Colpophyllia natans, Pseudodiploria strigosa, Diploria labyrinthiformis, and Orbicella annularis were reduced to <25% of their initial densities. The high prevalence of disease, the number of susceptible species, and the high mortality of corals affected suggests this disease outbreak is arguably one of the most lethal ever recorded on a contemporary coral reef.

  11. Mangrove habitats provide refuge from climate change for reef-building corals

    NASA Astrophysics Data System (ADS)

    Yates, K. K.; Rogers, C. S.; Herlan, J. J.; Brooks, G. R.; Smiley, N. A.; Larson, R. A.

    2014-03-01

    Risk analyses indicate that more than 90% of the world's reefs will be threatened by climate change and local anthropogenic impacts by the year 2030 under "business as usual" climate scenarios. Increasing temperatures and solar radiation cause coral bleaching that has resulted in extensive coral mortality. Increasing carbon dioxide reduces seawater pH, slows coral growth, and may cause loss of reef structure. Management strategies include establishment of marine protected areas with environmental conditions that promote reef resiliency. However, few resilient reefs have been identified, and resiliency factors are poorly defined. Here we characterize the first natural, non-reef, coral refuge from thermal stress and ocean acidification and identify resiliency factors for mangrove-coral habitats. We measured diurnal and seasonal variations in temperature, salinity, photosynthetically active radiation (PAR), and seawater chemistry; characterized substrate parameters; and examined water circulation patterns in mangrove communities where scleractinian corals are growing attached to and under mangrove prop roots in Hurricane Hole, St. John, US Virgin Islands. Additionally, we inventoried the coral species and quantified incidences of coral bleaching, mortality and recovery for two major reef-building corals, Colpophyllia natans and Diploria labyrinthiformis, growing in mangrove shaded and exposed (unshaded) areas. At least 33 species of scleractinian corals were growing in association with mangroves. Corals were thriving in low-light (more than 70% attenuation of incident PAR) from mangrove shading and at higher temperatures than nearby reef tract corals. A higher percentage of C. natans colonies was living shaded by mangroves, and no shaded colonies bleached. Fewer D. labyrinthiformis colonies were shaded by mangroves, however more unshaded colonies bleached. A combination of substrate and habitat heterogeniety, proximity of different habitat types, hydrographic conditions, and biological influences on seawater chemistry generate chemical conditions that buffer against ocean acidification. This previously undocumented refuge for corals provides evidence for adaptation of coastal organisms and ecosystem transition due to recent climate change. Identifying and protecting other natural, non-reef coral refuges is critical for sustaining corals and other reef species into the future.

  12. Diverse coral communities in mangrove habitats suggest a novel refuge from climate change

    NASA Astrophysics Data System (ADS)

    Yates, K. K.; Rogers, C. S.; Herlan, J. J.; Brooks, G. R.; Smiley, N. A.; Larson, R. A.

    2014-08-01

    Risk analyses indicate that more than 90% of the world's reefs will be threatened by climate change and local anthropogenic impacts by the year 2030 under "business-as-usual" climate scenarios. Increasing temperatures and solar radiation cause coral bleaching that has resulted in extensive coral mortality. Increasing carbon dioxide reduces seawater pH, slows coral growth, and may cause loss of reef structure. Management strategies include establishment of marine protected areas with environmental conditions that promote reef resiliency. However, few resilient reefs have been identified, and resiliency factors are poorly defined. Here we characterize the first natural, non-reef coral refuge from thermal stress and ocean acidification and identify resiliency factors for mangrove-coral habitats. We measured diurnal and seasonal variations in temperature, salinity, photosynthetically active radiation (PAR), and seawater chemistry; characterized substrate parameters; and examined water circulation patterns in mangrove communities where scleractinian corals are growing attached to and under mangrove prop roots in Hurricane Hole, St. John, US Virgin Islands. Additionally, we inventoried the coral species and quantified incidences of coral bleaching, mortality, and recovery for two major reef-building corals, Colpophyllia natans and Diploria labyrinthiformis, growing in mangrove-shaded and exposed (unshaded) areas. Over 30 species of scleractinian corals were growing in association with mangroves. Corals were thriving in low-light (more than 70% attenuation of incident PAR) from mangrove shading and at higher temperatures than nearby reef tract corals. A higher percentage of C. natans colonies were living shaded by mangroves, and no shaded colonies were bleached. Fewer D. labyrinthiformis colonies were shaded by mangroves, however more unshaded colonies were bleached. A combination of substrate and habitat heterogeneity, proximity of different habitat types, hydrographic conditions, and biological influences on seawater chemistry generate chemical conditions that buffer against ocean acidification. This previously undocumented refuge for corals provides evidence for adaptation of coastal organisms and ecosystem transition due to recent climate change. Identifying and protecting other natural, non-reef coral refuges is critical for sustaining corals and other reef species into the future.

  13. Elevated temperatures and bleaching on a high latitude coral reef: the 1988 Bermuda event

    NASA Astrophysics Data System (ADS)

    Cook, Clayton B.; Logan, Alan; Ward, Jack; Luckhurst, Brian; Berg, Carl J.

    1990-03-01

    Sea temperatures were normal in Bermuda during 1987, when Bermuda escaped the episodes of coral bleaching which were prevalent throughout the Caribbean region. Survey transecs in 1988 on 4 6 m reefs located on the rim margin and on a lagoonal patch reef revealed bleaching only of zoanthids between May and July. Transect and tow surveys in August and September revealed bleaching of several coral species; Millepora alcicornis on rim reefs was the most extensively affected. The frequency of bleaching in this species, Montastrea annularis and perhaps Diploria labyrinthiformis was significantly higher on outer reefs than on inshore reefs. This bleaching period coincided with the longest period of elevated sea temperatures in Bermuda in 38 years (28.9 30.9°C inshore, >28° offshore). By December, when temperatures had returned to normal, bleaching of seleractinians continued, but bleaching of M. alcicornis on the outer reefs was greatly reduced. Our observations suggest that corals which normally experience wide temperature ranges are less sensitive to thermal stress, and that high-latitude reef corals are sensitive to elevated temperatures which are within the normal thermal range of corals at lower latitudes.

  14. Determination of low-level mercury in coralline aragonite by calcination-isotope dilution-inductively coupled plasma-mass spectrometry and its application to Diploria specimens from Castle Harbour, Bermuda

    NASA Astrophysics Data System (ADS)

    Lamborg, Carl H.; Swarr, Gretchen; Hughen, Konrad; Jones, Ross J.; Birdwhistell, Scot; Furby, Kathryn; Murty, Sujata A.; Prouty, Nancy; Tseng, Chun-Mao

    2013-05-01

    We have developed a technique that combines a high temperature quartz furnace with inductively coupled plasma-mass spectrometry for the determination of Hg stored in the annual CaCO3 bands found in coral skeletons. Substantial matrix effects, presumably due to the discontinuous introduction of CO2 to the gas stream, were corrected for by simultaneously supplying a stream of argon containing highly enriched elemental 202Hgo and observing peaks in the 200Hg/202Hg signal as the sample was decomposed. Primary signal calibration for Hg was achieved using gas injections from a saturated vapor standard. The absolute instrument detection limit was low (about 0.2 fmol), with a practical limit of detection (3σ of blanks) of 2 fmol. Reproducibility of samples was (RSD) 15-27%. We applied this method to the determination of Hg concentrations in two colonies of Diploria labyrinthiformis collected from Castle Harbour, Bermuda, at a site about to be buried under the municipal waste landfill. The temporal reconstructions of Castle Harbour seawater Hg concentrations implied by the coral record show a decline throughout the period of record (1949-2008). The coral archived no apparent signal associated with waste disposal practices in the Harbour (bulk waste land-filling or, since 1994, disposal of waste incinerator ash), and mercury concentrations in the coral did not correlate to growth rate as assessed by linear extension. There was, however, a large and nearly exponential decrease in apparent Hg concentration in the Harbour which circumstantially implicates the dredging and/or landfilling operations associated with the construction of the airport on St. David's Island.

  15. Ocean circulation and biogeochemistry moderate interannual and decadal surface water pH changes in the Sargasso Sea

    USGS Publications Warehouse

    Nathalie F. Goodkin,; Bo-Shian Wang,; Chen-Feng You,; Konrad Hughen,; Prouty, Nancy G.; Bates, Nicholas; Scott Doney,

    2015-01-01

    The oceans absorb anthropogenic CO2 from the atmosphere, lowering surface ocean pH, a concern for calcifying marine organisms. The impact of ocean acidification is challenging to predict as each species appears to respond differently and because our knowledge of natural changes to ocean pH is limited in both time and space. Here we reconstruct 222 years of biennial seawater pH variability in the Sargasso Sea from a brain coral, Diploria labyrinthiformis. Using hydrographic data from the Bermuda Atlantic Time-series Study and the coral-derived pH record, we are able to differentiate pH changes due to surface temperature versus those from ocean circulation and biogeochemical changes. We find that ocean pH does not simply reflect atmospheric CO2 trends but rather that circulation/biogeochemical changes account for >90% of pH variability in the Sargasso Sea and more variability in the last century than would be predicted from anthropogenic uptake of CO2 alone.

  16. Quantification of total and particulate dimethylsulfoniopropionate (DMSP) in five Bermudian coral species across a depth gradient

    NASA Astrophysics Data System (ADS)

    Yost, D. M.; Jones, R.; Rowe, C. L.; Mitchelmore, Carys Louise

    2012-06-01

    The symbiotic dinoflagellate microalgae of corals ( Symbiodinium spp.) contain high concentrations of dimethylsulfoniopropionate (DMSP), a multifunctional metabolite commonly found in many species of marine algae and dinoflagellates. A photoprotective antioxidant function for DMSP and its breakdown products has often been inferred in algae, but its role(s) in the coral-algal symbiosis remains elusive. To examine potential correlations between environmental and physiological parameters and DMSP, total DMSP (DMSPt, from the host coral and zooxanthellae), particulate DMSP (DMSPp, from the zooxanthellae only), coral surface area, and total protein, as well as zooxanthellae density, chlorophyll concentration, cell volume and genotype (i.e., clade) were measured in five coral species from the Diploria- Montastraea- Porites species complex in Bermuda along a depth gradient of 4, 12, 18, and 24 m. DMSPt concentrations were consistently greater than DMSPp concentrations in all species suggesting the possible translocation of DMSP from symbiont to host. D. labyrinthiformis was notably different from the other corals examined, showing DMSPp and DMSPt increases (per coral surface area or tissue biomass) with increasing water depth. However, overall, there were no consistent depth-related patterns in DMSPp and DMSPt concentrations. Further research, investigating dimethylsulfide (DMS), dimethylsulfoxide, and acrylate levels and DMSP-lyase activity in correlation with other biomarker endpoints that have been shown to be depth (i.e., temperature and light) responsive are needed to substantiate the significance of these findings.

  17. Tropical Archaea: Diversity associated with the surface microlayer of corals

    USGS Publications Warehouse

    Kellogg, C.A.

    2004-01-01

    Recent 16S rDNA studies have focused on detecting uncultivated bacteria associated with Caribbean reef corals in an effort to address the ecological roles of coral-associated microbes. Reports of Archaea associated with fishes and marine invertebrates raised the question of whether Archaea might also be part of the coral-associated microbial community. DNA analysis of mucus from 3 reef-building species of Caribbean corals, Montastraea annularis complex, Diploria strigosa and D. labyrinthiformis in the US Virgin Islands yielded 34 groups of archaeal 16S ribotypes (defined at the level of 97% similarity). The majority (75%) was most closely matched by BLAST searches to sequences derived from marine water column samples, whereas the remaining ribotypes were most similar to sequences isolated from anoxic environments (15%) and hydrothermal vents (9%). Unlike previous 16S studies of coral-associated Bacteria, the results do not suggest specific associations between particular archaeal sequences and individual coral species. Marine Archaea (Groups I, II and III) in addition to Thermoplasma-like, methanogen, and marine benthic crenarchaeote phylotypes, were detected in the mucus of tropical corals. The finding of sequences from coral-associated Archaea that are closely related to strict and facultative anaerobes, as well as to uncultivated Archaea from other types of anoxic environments, suggests that anaerobic micro-niches may exist in coral mucus layers. Archaea, with their unique biogeochemical capabilities, broaden the scope of possible interactions between corals and their associated microbial communities.

  18. The North Atlantic Oscillation Reconstructed at Bermuda for 220 Years Using Sr/Ca Ratios in Diploria labyrinthiformis (brain coral)

    NASA Astrophysics Data System (ADS)

    Goodkin, N. F.; Hughen, K. A.; Cohen, A. L.; Curry, W. B.; Doney, S. C.

    2006-12-01

    The North Atlantic Oscillation (NAO) is a meridional oscillation in atmospheric mass measured by pressure anomalies between Iceland (65°N, 23°W) and the Azores (38°N, 26°W) (Hurrell, 1995). Changes between the positive and negative phase of the NAO strongly influence weather patterns across the US, Europe and the Middle East. A shift in recent decades toward a sustained positive NAO has raised questions about the influence of greenhouse gas emissions on this system. Unfortunately, instrumental records are too short to identify the natural baseline variability of the NAO, and NAO reconstructions generally encompass only land-based proxies, excluding ocean processes. Winter-time sea surface temperatures (SST) in the Sargasso Sea have previously been shown to correlate to the NAO (Visbeck et al., 2001), and thus a long winter SST record based on proxy data could be used to reconstruct NAO variability back in time. Here we present an annually resolved winter-time strontium to calcium ratio (Sr/Ca) record from a 220-year old brain coral (Diploria labyrinthiformis) collected from the south shore of Bermuda. Brain coral is prevalent in Bermuda and shows distinct annual banding in its skeleton providing precise age models. Winter-time coral Sr/Ca has previously been shown to accurately record winter SST free from growth rate influences (Goodkin et al., 2005), and that relationship is confirmed here. Cross-spectral analysis between winter-time coral Sr/Ca and four instrumental and proxy records of the NAO (Hurrell, 1995, Jones et al., 1997, Luterbacher et al., 2001, Cook et al., 2002) show two frequencies of coherence with >95% confidence. At periods greater than 20 years and between 3 and 5 years, the coral Sr/Ca effectively captures the NAO variability. Filtering the coral record to these frequencies and comparing to the instrumental and proxy records, including another marine-based NAO reconstruction from the North and Norwegian Seas (Schoene et al., 2003), show strong agreement and provide information about the differences between high and low frequency responses to the NAO. At high frequencies, SST at Bermuda shows a positive correlation to the NAO, as predicted by the tri-pole SST response (Visbeck et al., 2001), and succeeds well at capturing amplitude variability. At low frequencies, however, Bermuda SST shows a negative correlation to the NAO, different than the response predicted by the high frequency tri-pole pattern. One possible explanation for this shift is a response to changes in the meridional overturning circulation (MOC), which is believed to show variability at lower frequencies (Curry et al., 2003) and which may be driving changes in both SST and the NAO. Over 50 years during the late 20th century warming (1950-1999), the amplitude of the Sr/Ca-based NAO record at 3-5 year periods is 20% greater than that found during an equivalent interval at the end of the LIA (1800- 1849). Low-frequency (20-50 year) variability also appears larger during the second half of the 20th century, compared to the LIA. These results indicate a change in NAO variability at different mean temperatures, with larger amplitude changes during warmer climates. However, a sustained positive NAO during the late LIA does not appear to support the hypothesis of a linear relationship between mean NAO and mean hemispheric temperature, as observed during the late 20th century warming.

  19. High Latitude Reefs: A Potential Refuge for Reef Builders

    NASA Astrophysics Data System (ADS)

    Amat, A.; Bates, N.

    2003-04-01

    Coral reefs globally show variable signs of deterioration or community structure changes due to a host of anthropogenic and natural factors. In these global scenarios, rates of calcification by reef builders such as Scleractinian corals are predicted to significantly decline in the future due to the increase in atmospheric CO_2. When considering the response of reefs to the present climate change, temperature effects should also be taken into account. Here, we investigate the simultaneous impact of temperature and CO_2 on the high-latitude Bermuda coral reef system (32^oN, 64^oE)through a series of in vitro experiments at different CO_2 levels and seasonally different summer (27^oC) and winter (20^oC) temperature conditions. Four species of Scleractinian corals (Porites astreoides, Diploria labyrinthiformis, Madracis mirabilis and decactis) were acclimated for three months at: 20^oC and 27^oC (both with CO_2 levels at 400 ppm (control) and 700 ppm). Growth was assessed by buoyant weight techniques during the acclimation period. Photosynthesis, respiration and calcification were measured at the end of this period using respirometric chambers. A reproduction experiment was also undertaken under 27^oC. Photosynthesis mainly remains constant or increases under high CO_2 conditions. The results of the integrated calcification measurements confirm the hypothesis that an increase in CO_2 induces a decrease in calcification. However an increase in photosynthesis can be observed when CO_2 is unfavorable for calcification suggesting that a biological control of calcification through photosynthesis could prevent a drop in the calcification potential. Buoyant weight results indicate that the CO_2 impact could be less detrimental under lower temperature. This result will be compared with the instantaneous calcification measurements in the chambers and some in situ coral growth assessments in winter and summer conditions. The consequences for the response of marginal reefs undergoing high seasonal temperature variations will finally be discussed.

  20. Isotopic composition of skeleton-bound organic nitrogen in reef-building symbiotic corals: A new method and proxy evaluation at Bermuda

    NASA Astrophysics Data System (ADS)

    Wang, X. T.; Sigman, D. M.; Cohen, A. L.; Sinclair, D. J.; Sherrell, R. M.; Weigand, M. A.; Erler, D. V.; Ren, H.

    2015-01-01

    The skeleton-bound organic nitrogen in reef-building symbiotic corals may be a high-resolution archive of ocean nitrogen cycle dynamics and a tool for understanding coral biogeochemistry and physiological processes. However, the existing methods for measuring the isotopic composition of coral skeleton-bound organic nitrogen (hereafter, CS-δ15N) either require too much skeleton material or have low precision, limiting the applications of this relatively new proxy. In addition, the controlling factors on CS-δ15N remain poorly understood: the δ15N of source nitrogen and the internal nitrogen cycle of the coral/zooxanthellae symbiosis may both be important. Here, we describe a new ("persulfate/denitrifier"-based) method for measuring CS-δ15N, requiring only 5 mg of skeleton material and yielding a long-term precision better than 0.2‰ (1σ). Using this new method, we investigate CS-δ15N at Bermuda. Ten modern Diploria labyrinthiformis coral cores/colonies from 4 sampling sites were measured for CS-δ15N. Nitrogen concentrations (nitrate + nitrite, ammonium, and dissolved organic nitrogen) and δ15N of plankton were also measured at these coral sites. Among the 4 sampling sites, CS-δ15N shows an increase with proximity to the island, from ∼3.8‰ to ∼6.8‰ vs. atmospheric N2, with the northern offshore site having a CS-δ15N 1-2‰ higher than the δ15N of thermocline nitrate in the surrounding Sargasso Sea. Two annually resolved CS-δ15N time series suggest that the offshore-inshore CS-δ15N gradient has persisted since at least the 1970s. Plankton δ15N among these 4 sites also has an inshore increase, but of only ∼1‰. Coral physiological change must explain the remaining (∼2‰) inshore increase in CS-δ15N, and previous work points to the coral/zooxanthellae N cycle as a control on host tissue (and thus carbonate skeletal) δ15N. The CS-δ15N gradient is hypothesized to result mainly from varying efficiency in the internal nitrogen recycling of the coral/zooxanthellae symbiosis. It is proposed that, in more productive inshore waters, greater food uptake by the coral causes a greater fraction of its low-δ15N regenerated ammonium to be excreted rather than assimilated by zooxanthellae, raising the δ15N of the inshore corals. If so, coral tissue- and CS-δ15N may prove of use to reconstruct and monitor the state of the coral/zooxanthellae symbiosis over space and time.

  1. The effect of species and colony size on the bleaching response of reef-building corals in the Florida Keys during the 2005 mass bleaching event

    NASA Astrophysics Data System (ADS)

    Brandt, M. E.

    2009-12-01

    Understanding the variation in coral bleaching response is necessary for making accurate predictions of population changes and the future state of reefs in a climate of increasing thermal stress events. Individual coral colonies, belonging to inshore patch reef communities of the Florida Keys, were followed through the 2005 mass bleaching event. Overall, coral bleaching patterns followed an index of accumulated thermal stress more closely than in situ temperature measurements. Eight coral species ( Colpophyllia natans, Diploria strigosa, Montastraea cavernosa, M. faveolata, Porites astreoides, P. porites, Siderastrea siderea, and Stephanocoenia intersepta), representing >90% of the coral colonies studied, experienced intense levels of bleaching, but responses varied. Bleaching differed significantly among species: Colpophyllia natans and Diploria strigosa were most susceptible to thermal stress, while Stephanocoenia intersepta was the most tolerant. For colonies of C. natans, M. faveolata, and S. siderea, larger colonies experienced more extensive bleaching than smaller colonies. The inshore patch reef communities of the Florida Keys have historically been dominated by large colonies of Montastraea sp. and Colpophyllia natans. These results provide evidence that colony-level differences can affect bleaching susceptibility in this habitat and suggest that the impact of future thermal stress events may be biased toward larger colonies of dominant reef-building species. Predicted increases in the frequency of mass bleaching and subsequent mortality may therefore result in significant structural shifts of these ecologically important communities.

  2. Diverse coral communities in mangrove habitats suggest a novel refuge from climate change

    USGS Publications Warehouse

    Yates, Kimberly K.; Rogers, Caroline S.; Herlan, James J.; Brooks, Gregg R.; Smiley, Nathan A.; Larson, Rebekka A.

    2014-01-01

    Over 30 species of scleractinian corals were growing in association with mangroves. Corals were thriving in low-light (more than 70% attenuation of incident PAR) from mangrove shading and at higher temperatures than nearby reef tract corals. A higher percentage of C. natans colonies were living shaded by mangroves, and no shaded colonies were bleached. Fewer D. labyrinthiformis colonies were shaded by mangroves, however more unshaded colonies were bleached. A combination of substrate and habitat heterogeneity, proximity of different habitat types, hydrographic conditions, and biological influences on seawater chemistry generate chemical conditions that buffer against ocean acidification. This previously undocumented refuge for corals provides evidence for adaptation of coastal organisms and ecosystem transition due to recent climate change. Identifying and protecting other natural, non-reef coral refuges is critical for sustaining corals and other reef species into the future.

  3. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Deslarzes, K.J.P.

    Reef coral populations were monitored from 1988 to 1991 at the Flower Garden Banks located in the northwestern Gulf of Mexico. The status of reef coral populations, and natural or man-made factors potentially affecting their well-being were determined. Man-made chronic disturbances are degrading coral reef resources on a global scale. Yet, the Flower Garden coral reefs seem to have been sheltered from the effects of regional stresses generated by population growth and increased industrial activity. Since 1974, reef coral population levels have remained unchanged in the Montastrea-Diploria Zones at the Flower Garden Banks. Live coral cover ranges between 46 andmore » 46.5%. Montastrea annularis and Diploria strigosa comprise 80% of the coral cover on either bank. The remainder of the cover is mostly shared by eight other taxa. Coral taxa appear to be more homogeneously distributed on the West Bank. The relatively greater number of Agaricia spp., Madracis decastis, and P. astreoides colonies on the East Bank may be the source of a decreased evenness. The health of reef corals was assessed using repetitive and non-repetitive photographic methods, and accretionary growth measurements of M. annularis. Reef corals have undergone small scale changes at the Flower Gardens probably reflecting natural disturbance, predation, disease, and inter-specific competition. White mat disease (ridge disease) is shown to generate more tissue loss than any of the three bleaching events that took place at the Flower Gardens (1989, 1990, and 1991). Advance to retreat linear ratios of encrusting growth revealed a net tissue gain on the East Bank and a net tissue loss on the West Bank. Growth rates of M. annularis were highly variable. The annual barium content from 1910 in 1989 in a M. annularis colony from the West Flower Garden did not reveal trends associated with the extensive oil and gas exploration in the northern Gulf of Mexico.« less

  4. Molecules and fossils reveal punctuated diversification in Caribbean “faviid” corals

    PubMed Central

    2012-01-01

    Background Even with well-known sampling biases, the fossil record is key to understanding macro-evolutionary patterns. During the Miocene to Pleistocene in the Caribbean Sea, the fossil record of scleractinian corals shows a remarkable period of rapid diversification followed by massive extinction. Here we combine a time-calibrated molecular phylogeny based on three nuclear introns with an updated fossil stratigraphy to examine patterns of radiation and extinction in Caribbean corals within the traditional family Faviidae. Results Concatenated phylogenetic analysis showed most species of Caribbean faviids were monophyletic, with the exception of two Manicina species. The time-calibrated tree revealed the stem group originated around the closure of the Tethys Sea (17.0 Ma), while the genus Manicina diversified during the Late Miocene (8.20 Ma), when increased sedimentation and productivity may have favored free-living, heterotrophic species. Reef and shallow water specialists, represented by Diploria and Favia, originate at the beginning of the Pliocene (5 – 6 Ma) as the Isthmus of Panama shoaled and regional productivity declined. Conclusions Later origination of the stem group than predicted from the fossil record corroborates the hypothesis of morphological convergence in Diploria and Favia genera. Our data support the rapid evolution of morphological and life-history traits among faviid corals that can be linked to Mio-Pliocene environmental changes. PMID:22831179

  5. Evaluation of Sr/Ca-based paleoclimate reconstructions in modern and Medieval Diploria strigosa corals in the northeastern Caribbean

    NASA Astrophysics Data System (ADS)

    Xu, Y.; Pearson, S. P.; Kilbourne, K.

    2013-12-01

    Tropical sea surface temperature (SST) has been implicated as a driver of climate changes during the Medieval Climate Anomaly (MCA, 950-1300 A.D.) but little data exists from the tropical oceans during this time period. We collected three modern and seven sub-fossil Diploria strigosa coral colonies from an overwash deposit on Anegada, British Virgin Islands (18.73 °N, 63.33 °W) in order to reconstruct climate in the northeastern Caribbean and Tropical North Atlantic during the MCA. The first step in our reconstruction was to verify the climate signal from this species at this site. We sub-sampled the modern corals along thecal walls with an average sampling resolution of 11-13 samples per year. Sr/Ca ratios measured in the sub-samples were calibrated to temperature using three different calibration techniques (ordinary least squares, reduced major axis, and weighted least squares (WLS)) on the monthly data that includes the seasonal cycles and on the monthly anomaly data. WLS regression accounts for unequal errors in the x and y terms, so we consider it the most robust technique. The WLS regression slope between gridded SST and coral Sr/Ca is similar to the previous two calibrations of this species. Mean Sr/Ca for each of the three modern corals is 8.993 × 0.004 mmol/mol, 9.127 × 0.003 mmol/mol, and 8.960 × 0.007 mmol/mol. These straddle the mean Diploria strigosa Sr/Ca found by Giry et al., (2010), 9.080 mmol/mol, at a site with nearly the same mean SST as Anegada (27.4 °C vs. 27.5 °C). The climatological seasonal cycles for SST derived from the modern corals are statistically indistinguishable from the seasonal cycles in the instrumental SST data. The coral-based seasonal cycles have ranges of 2.70 × 0.31 °C, 2.65 × 0.08 °C and 2.71 × 0.53 °C. These results indicate that this calibration can be applied to our sub-fossil coral data. We applied the WLS calibration to monthly-resolution Sr/Ca data from multiple sub-fossil corals dating to the medieval period with initial U-series dates near the top of the cores ranging from 1277 × 5 A.D. to 1327 × 5 A.D. Initial Sr/Ca results from the first sub-fossil coral have a seasonal range of 2.65 × 0.27 °C when converted to temperature units with our modern calibration, indicating no significant change from modern times. However, the mean Sr/Ca for this coral is very high (9.388 mmol/mol) compared to the modern corals. We explore the potential causes for this discrepancy in our study. Because reconstructing the mean SST during the Medieval Climate Anomaly may be difficult without temporal overlap with modern corals, our focus is on interannual variability. The coral Sr/Ca based monthly SST anomalies for both modern and sub-fossil corals have larger interannual variances than the instrumental record. One explanation for this is that the SSTs derived from sub-fossil corals are local data for which one expects larger variances than the instrumental data averaged over a 2 x 2 ° grid. This species shows great promise for future paleoclimate reconstructions.

  6. Last interglacial temperature seasonality reconstructed from tropical Atlantic corals

    NASA Astrophysics Data System (ADS)

    Felis, T.; Brocas, W.; Obert, J. C.; Gierz, P.; Lohmann, G.; Scholz, D.; Kölling, M.; Pfeiffer, M.; Scheffers, S. R.

    2016-12-01

    Reconstructions of last interglacial ( 127-117 ka) climate offer insights into the natural response and variability of the climate system during a period partially analogous to future climate change scenarios. However, the seasonal temperature changes of the tropical ocean are not well known for the last interglacial period. Here we present well preserved fossil corals (Diploria strigosa) recovered from the southern Caribbean island of Bonaire. These corals have been precisely dated by the 230Th/U-method to between 130 and 118 ka ago. Annual banding of the coral skeleton enabled construction of time windows of monthly resolved Sr/Ca temperature proxy records. Our eight coral records of up to 37 years in length cover a total of 105 years within the last interglacial period. From these coral records, sea surface temperature (SST) seasonality in the tropical North Atlantic Ocean is reconstructed. We detect similar to modern SST seasonality of 2.9 °C during the early (130 ka) and the late last interglacial (120 - 118 ka). However, within the mid-last interglacial, a significantly higher than modern SST seasonality of 4.9 °C (at 126 ka) and 4.1 °C (at 124 ka) is observed. These findings are supported by climate model simulations (COSMOS) and are consistent with the evolving amplitude of orbitally induced changes in seasonality of insolation throughout the last interglacial, irrespective of wider climatic instabilities that characterised this period, e.g. at 118 ka ago. The climate model simulations suggest that the SST seasonality changes documented in our last interglacial coral Sr/Ca records are representative of larger regions within the tropical North Atlantic. These simulations also suggest that the reconstructed SST seasonality increase during the mid-last interglacial is caused primarily by summer warming. Furthermore, a 124 ka old coral documents evidence of decadal SST variability in the tropical North Atlantic during the last interglacial, akin to that observed in modern instrumental records. Our results indicate that the dense theca walls of brain coral skeletons (e.g., Diploria strigosa) can provide robust seasonally resolved proxy records of tropical SST and reliable 230Th/U-ages for the last interglacial period.

  7. Spatial variability in distribution and prevalence of Caribbean scleractinian coral and octocoral diseases. II. Genera-level analysis.

    PubMed

    Cróquer, Aldo; Weil, Ernesto

    2009-02-25

    Geographic assessments of coral/octocoral diseases affecting major reef-building genera and abundant reef species are important to understand their local and geographic spatial-temporal variability and their impact. The status and spatial variability of major Caribbean coral/octocoral diseases affecting important reef-building coral (Montastraea, Diploria, Siderastrea, Stephanocoenia, Porites, and Agaricia) and common, widespread octocoral genera (Gorgonia and Pseudopterogorgia) was assessed along 4 permanent 10 x 2 m band-transects in each of 3 depth habitats (<4, 5-12 and >15 m) on 2 reefs in 6 countries across the wider Caribbean during the summer and fall of 2005. A permutational multivariate analysis of variance was used to test the spatial variability (countries, reef sites and depth habitats) in prevalence of major diseases in these genera. We found a significant interaction of disease prevalence in the different coral and octocoral genera between reef sites and habitats (depth intervals). Montastraea was primarily affected by both white plague (WP-II) and yellow band disease in deep (16.9 +/- SE 16% and 16.9 +/- SE 2.3%) and intermediate (8.1 +/- SE 1.6% and 15.5 +/- SE 2.3%) depth habitats of Culebrita (Puerto Rico) and Chub Cut (Bermuda), respectively. Prevalence of multiple diseases simultaneously and other compromised-health problems affecting Montastraea colonies varied between 0.2 to 2% and 0.2 to 1.8%, respectively. Agaricia and Diploria were mostly affected by WP-II (0.5 to 16%), black band disease (0.4 to 5%) and Caribbean ciliate infections (0.2 to 12%). Siderastrea and Stephanocoenia were mainly affected by dark spots disease in Curaçao, with higher prevalence in intermediate (40.5 +/- SE 6.2%) and deep (26.6 +/- SE 4.2%) habitats. Aspergillosis and other compromised-health conditions affected Gorgonia ventalina (0.2 to 8%) and other common and widespread octocoral genera (1 to 14%), respectively.

  8. Chronic and catastrophic natural mortality of three common Caribbean reef corals

    NASA Astrophysics Data System (ADS)

    Bythell, J. C.; Gladfelter, E. H.; Bythell, M.

    1993-11-01

    Compared to catastrophic impacts from storms, disease epidemics and bleaching events, little is known about the effects of more routine chronic mortality in reef corals. To monitor this ongoing mortality, monthly visual assessments of the cause of tissue damage were related to mortality rates (changes in planar surface area) of tagged colonies of three common reef corals: Montastrea annularis, Porites astreoides and Diploria strigosa at Buck Island Reef National Monument, St. Croix, US Virgin Islands. During the study Hurricane Hugo, the most powerful cyclone to affect the area in at least 60 y, made a direct impact on the site. Effects of the hurricane were extremely localized, with certain exposed sites being almost completely razed while others showed no detectable changes in community structure. Mortality caused both by the hurricane and by other factors during the 26 month study varied between species and also between site locations around the island. Differences in susceptibility were not dependent solely on gross morphology, because two robust, massive species showed opposite responses to hurricane damage and chronic mortality. Diploria strigosa was virtually unaffected by chronic factors, but was heavily damaged at exposed sites during the hurricane. In contrast, mortality from predation and tissue necrosis was high in Montastrea annularis, but it largely escaped damage from the hurricane because it was absent from the most severely scoured locations. Porites astreoides, with populations dominated by much smaller colonies, was affected by both chronic and hurricanerelated mortality. Differences in susceptibility to the various types of natural disturbance among species, coupled with high spatial and temporal variability in the effects of such disturbances, may be critical to the maintenance of species diversity on the reef.

  9. Shifts in bacterial communities of two caribbean reef-building coral species affected by white plague disease

    PubMed Central

    Cárdenas, Anny; Rodriguez-R, Luis M; Pizarro, Valeria; Cadavid, Luis F; Arévalo-Ferro, Catalina

    2012-01-01

    Coral reefs are deteriorating at an alarming rate mainly as a consequence of the emergence of coral diseases. The white plague disease (WPD) is the most prevalent coral disease in the southwestern Caribbean, affecting dozens of coral species. However, the identification of a single causal agent has proved problematic. This suggests more complex etiological scenarios involving alterations in the dynamic interaction between environmental factors, the coral immune system and the symbiotic microbial communities. Here we compare the microbiome of healthy and WPD-affected corals from the two reef-building species Diploria strigosa and Siderastrea siderea collected at the Tayrona National Park in the Caribbean of Colombia. Microbiomes were analyzed by combining culture-dependent methods and pyrosequencing of 16S ribosomal DNA (rDNA) V5-V6 hypervariable regions. A total of 20 410 classifiable 16S rDNA sequences reads were obtained including all samples. No significant differences in operational taxonomic unit diversity were found between healthy and affected tissues; however, a significant increase of Alphaproteobacteria and a concomitant decrease in the Beta- and Gammaproteobacteria was observed in WPD-affected corals of both species. Significant shifts were also observed in the orders Rhizobiales, Caulobacteriales, Burkholderiales, Rhodobacterales, Aleteromonadales and Xanthomonadales, although they were not consistent between the two coral species. These shifts in the microbiome structure of WPD-affected corals suggest a loss of community-mediated growth control mechanisms on bacterial populations specific for each holobiont system. PMID:21955993

  10. Colony size as a species character in massive reef corals

    NASA Astrophysics Data System (ADS)

    Soong, Keryea

    1993-07-01

    In a study of seven massive, Caribbean corals, I have found major differences in reproductive behavior between species with large maximum colony sizes and species with smaller maximum colony sizes. Four species ( Diploria clivosa, D. strigosa, Montastrea cavernosa, Siderastrea siderea) which are large (<1000 cm2 in surface area) broadcast gametes during a short spawning season. Their puberty size is relatively large (>100 cm2, except M. cavernosa). In contrast, two small massive species (<100 cm2, Favia fragum and S. radians), and one medium-sized (100 1000 cm2, Porites astreoides) massive species, brood larvae during an extended season (year-round in Panama). The puberty size of the small species is only 2 4 cm2. Given these close associations between maximum colony sizes and a number of fundamental reproductive attributes, greater attention should be given to the colony size distributions of different species of reef corals in nature, since many important life history and population characters may be inferred.

  11. Impact of warming events on reef-scale temperature variability as captured in two Little Cayman coral Sr/Ca records

    NASA Astrophysics Data System (ADS)

    von Reumont, J.; Hetzinger, S.; Garbe-Schönberg, D.; Manfrino, C.; Dullo, W.-Chr.

    2016-03-01

    The rising temperature of the world's oceans is affecting coral reef ecosystems by increasing the frequency and severity of bleaching and mortality events. The susceptibility of corals to temperature stress varies on local and regional scales. Insights into potential controlling parameters are hampered by a lack of long term in situ data in most coral reef environments and sea surface temperature (SST) products often do not resolve reef-scale variations. Here we use 42 years (1970-2012) of coral Sr/Ca data to reconstruct seasonal- to decadal-scale SST variations in two adjacent but distinct reef environments at Little Cayman, Cayman Islands. Our results indicate that two massive Diploria strigosa corals growing in the lagoon and in the fore reef responded differently to past warming events. Coral Sr/Ca data from the shallow lagoon successfully record high summer temperatures confirmed by in situ observations (>33°C). Surprisingly, coral Sr/Ca from the deeper fore reef is strongly affected by thermal stress events, although seasonal temperature extremes and mean SSTs at this site are reduced compared to the lagoon. The shallow lagoon coral showed decadal variations in Sr/Ca, supposedly related to the modulation of lagoonal temperature through varying tidal water exchange, influenced by the 18.6 year lunar nodal cycle. Our results show that reef-scale SST variability can be much larger than suggested by satellite SST measurements. Thus, using coral SST proxy records from different reef zones combined with in situ observations will improve conservation programs that are developed to monitor and predict potential thermal stress on coral reefs.

  12. Anomalous levels of 90Sr and 239,240Pu in Florida corals: Evidence of coastal processes

    NASA Astrophysics Data System (ADS)

    Purdy, Caroline B.; Druffel, Ellen R. M.; Livingston, Hugh D.

    1989-06-01

    Strontium-90, a radionuclide whose primary source is fallout from nuclear weapons testing, serves as a tritium-like tracer of ocean circulation. The historical record of 90Sr activities in the annual bands of island corals have been shown by other investigators to reflect the 90Sr concentration in surface waters at those site. Strontium-90 activities measured in annual bands in Montastrea annularis from the Florida Keys are 30-120% higher than those in corresponding peak activity years (1960-1965) of a Bermuda coral ( Diploria). The Bermuda 90Sr activity record reflects the fallout source only, whereas the additional 90Sr activity in the Florida Keys is expected to reflect a coastal runoff source as well as the fallout. The coastal circulation patterns off the northern and western edge of the Florida Current further act to concentrate and prolong the exposure of the runoff 90Sr to the corals. Six measured 239,240Pu activities in the Florida coral are 30% of 239,240Pu activities in island coral records previously reported. Since Pu is expected to be scavenged by particles in coastal waters, this decrease in 239,240Pu substantiates the importance of coastal influences in the Florida 90Sr record. Strontium-90 activities measured in subannual coral bands from 1973 to 1974 reflect seasonal changes in the 90Sr concentrations in the surface layer of the coastal waters. This may reflect Loop Current intrusion events. The seasonal and long-term coral 90Sr data presented in this paper suggests that coastal 90Sr coral time series may be very useful for documenting coastal circulation patterns.

  13. Coral diseases and bleaching on Colombian Caribbean coral reefs.

    PubMed

    Navas-Camacho, Raúl; Gil-Agudelo, Diego Luis; Rodríguez-Ramírez, Alberto; Reyes-Nivia, María Catalina; Garzón-Ferreira, Jaime

    2010-05-01

    Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC) has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá). The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10 x 2m) with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters) are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2), and Urabá had high numbers with bleaching (54.4 colonies/m2). Of the seven reported coral diseases studied, Dark Spots Disease (DSD), and White Plague Disease (WPD) were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A. grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years) variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few long-term monitoring studies on coral diseases worldwide.

  14. An Overview of Coral Community Development on Offshore Platforms in the Gulf of Mexico

    NASA Astrophysics Data System (ADS)

    Sammarco, P. W.

    2016-02-01

    Oil platforms in the N. Gulf of Mexico (GOM) number 1,750, providing hard substratum for settlement of marine fauna, including corals, where little existed in shallow water prior to the 1940s. The introduction of hard substratum has facilitated the biogeographic expansion of Caribbean reef corals. We surveyed scleractinian corals, hermatypic and ahermatypic, on 48 platforms around the Flower Garden Banks (FGB) and across the continental shelf, from Corpus Christi, Texas to Mobile, Alabama, USA. We also assessed coral populations on platforms and the FGB for genetic affinities using AFLPs. The western limit for hermatypes was the shelf edge off Corpus Christi. The highest hermatypic densities occurred at the shelf edge, 200 km from shore in the north-central GOM. Mobile was the eastern limit for some hermatypic corals. Ahermatypes (i.e., Tubastraea coccinea, Oculina diffusa, Phyllangia americana) were absent inshore and in the north-central GOM. Species richness of hermatypic corals peaked near the FGB. Genetic analyses revealed high self-recognition and site fidelity on the platforms and the FGB in Madracis decactis, particularly in the eastern GOM. Platform populations exhibited a strong genetic affinity to those on the FGB, indicating that the FGB are the likely larval source for many corals on the platforms. There was little or no genetic affinity of coral populations across the mouth of the Mississippi River, although in T. coccinea (invasive species), cross-recognition between populations was higher between platforms on a given side. The Mississippi is a strong geographic barrier to east-west dispersal. Brooders were found to be more effective at colonizing patchy habitats at this meso-scale than broadcasters (Diploria strigosa and Montastraea cavernosa). Broadcaster recruits were rarely found, indicating less effective dispersal capabilities. Oil/gas platforms have facilitated the development of coral communities across the northern GOM.

  15. Dynamics of Black Band Disease in a Diploria strigosa population subjected to annual upwelling on the northeastern coast of Venezuela

    NASA Astrophysics Data System (ADS)

    Rodríguez, S.; Cróquer, A.

    2008-06-01

    Temporal variability of Black Band Disease (BBD) prevalence, incidence, recurrence, recovery and virulence was estimated in a Diploria strigosa population from an upwelling zone of Venezuela, for 1 year between August 2004 and August 2005. The sampling spanned both upwelling and non-upwelling seasons, and included three samplings, roughly 60 days apart, within each season. The negative effects of BBD epizootiology in the sampling population (El Mercado reef) were positively correlated with sea surface temperature (taken as an upwelling estimator). Disease prevalence, incidence and recurrence decreased significantly during upwelling, and the recovery rate increased. Contrary to expectations, tissue mortality did not decrease significantly during the upwelling season, remaining at 1.2 ± 0.7 mm day-1. BBD prevalence, and the ensuing rates of tissue mortality were higher than values previously reported for other Caribbean reefs, even during upwelling episodes, suggesting that nutrient enrichment of the local waters by upwelling counteracts the expected reductions of the disease prevalence and virulence due to the lower temperature. Colonies which had previously been infected with BBD were up to six times more susceptible to new infections than those which were not infected during the preceding 7 months, suggesting that the infected colonies never healed completely. The high variability between tissue mortality values among coral colonies also suggests that overall host health-status may alter susceptibility to BBD infections.

  16. Ten years of change to coral communities off Mona and Desecheo Islands, Puerto Rico, from disease and bleaching.

    PubMed

    Bruckner, Andrew W; Hill, Ronald L

    2009-11-16

    Remote reefs off southwest Puerto Rico have experienced recent losses in live coral cover of 30 to 80%, primarily due to the decline of Montastraea annularis and M. faveolata from disease and bleaching. These species were formerly the largest, oldest, and most abundant corals on these reefs, constituting over 65% of the living coral cover and 40 to 80% of the total number of colonies. From 1998 to 2001, outbreaks of yellow band disease (YBD) and white plague (WP) affected 30 to 60% of the M. annularis (complex) colonies. Disease prevalence declined beginning in 2002, and then increased immediately following the 2005 mass bleaching event. Colonies of M. annularis (complex) have been reduced in abundance by 24 to 32%, and remaining colonies are missing more than half their tissue. Both M. annularis and M. faveolata have failed to recruit, resheeting has been minimal, and exposed skeletal surfaces are being colonized by macroalgae, bioeroding sponges, and hydrozoans. Other scleractinian corals were smaller in size (mean = 28 cm diameter) and exhibited lower levels of partial mortality; these taxa were affected to a lesser extent by coral diseases and bleaching-associated tissue loss over the last decade. The numbers of small colonies (1 to 9 cm) of these species identified since 2005 also exceeded numbers of larger colonies that died. These reefs appear to be exhibiting shifts in species assemblages, with replacement of M. annularis (complex) by shorter-lived brooding species and other massive and plating corals (Agaricia, Porites, Meandrina, Eusmilia, Diploria, and Siderastrea spp.). To avoid a catastrophic and permanent loss of the dominant, slow-growing reef-building corals, the causes and effects of diseases need to be better understood, and possible control mechanisms must be developed. In particular, steps must be taken to mitigate environmental and anthropogenic stressors that increase the spread and severity of disease.

  17. The demise of a major Acropora palmata bank-barrier reef off the southeast coast of Barbados, West Indies

    NASA Astrophysics Data System (ADS)

    MacIntyre, I. G.; Glynn, P. W.; Toscano, M. A.

    2007-12-01

    Formerly attributed to human activity, the demise of a bank-barrier reef off southeastern Barbados known as Cobbler’s Reef is now thought to be largely the result of late Holocene, millennial-scale storm damage. Eleven surface samples of the reef crest coral Acropora palmata from nine sites along its 15-km length plot above the western Atlantic sea-level curve from 3,000 to 4,500 cal years ago (calibrated, calendar 14C years). These elevated clusters suggest that the reef complex suffered extensive storm damage during this period. The constant heavy wave action typical of this area and consequent low herbivory maintain conditions favoring algal growth, thereby limiting the reestablishment of post-storm reef framework. Site descriptions and detailed line surveys show a surface now composed mainly of reworked fragments of A. palmata covered with algal turf, macroalgae and crustose coralline algae. The reef contains no live A. palmata and only a few scattered coral colonies consisting primarily of Diploria spp . and Porites astreoides, along with the hydrocoral Millepora complanata. A few in situ framework dates plot at expected depths for normal coral growth below the sea-level curve during and after the period of intense storm activity. The most recent of these in situ samples are 320 and 400 cal years old. Corals of this late period likely succumbed to high turbidity associated with land clearance for sugarcane agriculture in the mid-1600s.

  18. Reconstructing medieval climate in the tropical North Atlantic with corals from Anegada, British Virgin Islands

    NASA Astrophysics Data System (ADS)

    Kilbourne, K. H.; Xu, Y. Y.

    2014-12-01

    Resolving the patterns of climate variability during the Medieval Climate Anomaly (MCA) is key for exploring forced versus unforced variability during the last 1000 years. Tropical Atlantic climate is currently not well resolved during the MCA despite it being an important source of heat and moisture to the climate system today. To fill this data gap, we collected cores from Diploria strigosa corals brought onto the low-lying island of Anegada, British Virgin Islands (18.7˚N, 64.3˚S) during an overwash event and use paired analysis of Sr/Ca and δ18O in the skeletal aragonite to explore climate in the tropical Atlantic at the end of the MCA. The three sub-fossil corals used in this analysis overlap temporally and together span the years 1256-1372 C.E. An assessment of three modern corals from the study site indicates that the most robust features of climate reconstructions using Sr/Ca and δ18O in this species are the seasonal cycle and inter-annual variability. The modern seasonal temperature range is 2.8 degrees Celsius and the similarity between the modern and sub-fossil coral Sr/Ca indicates a similar range during the MCA. Today seasonal salinity changes locally are driven in large part by the migration of a regional salinity front. The modern corals capture the related large seasonal seawater δ18O change, but the sub-fossil corals indicate stable seawater δ18O throughout the year, supporting the idea that this site remained on one side of the salinity front continuously throughout the year. Inter-annual variability in the region is influenced by the cross-equatorial SST gradient, the North Atlantic Oscillation and ENSO. Gridded instrumental SST from the area surrounding Anegada and coral geochemical records from nearby Puerto Rico demonstrate concentrations of variance in specific frequency bands associated with these phenomena. The sub-fossil coral shows no concentration of variance in the modern ENSO frequency band, consistent with reduced ENSO variability found in central Pacific corals growing at the same time.

  19. Interaction between inorganic nutrients and organic matter in controlling coral reef communities in Glovers Reef Belize.

    PubMed

    McClanahan, T R; Steneck, R S; Pietri, D; Cokos, B; Jones, S

    2005-05-01

    We studied the responses of algae, corals, and small fish to elevated inorganic fertilizer, organic matter, and their combination over a 49-day summer period in cages that simulated the coral reef in the remote Glovers reef atoll, Belize. The addition of organic matter reduced while fertilization had no effect on the numbers of herbivorous damsel and parrotfishes. All measures of algal biomass were influenced by fertilization. The combined inorganic and organic enrichment produced the highest algal biomass, which is most likely due to the combined effect of higher nutrients and lower herbivory. The cover of turf and total algae were influenced by all treatments and their interactions and most strongly and positively influenced by fertilization followed by organic matter and the combination of organic matter and inorganic fertilizer. The inorganic and combined treatments were both dominated by two turf algae, Enteromorpha prolifera and Digenia simplex, while the nonfertilized treatments were dominated by brown frondose algae Lobophora variegata, Padina sanctae, and Dictyota cervicornis. The organic matter treatment had greater cover of P. sanctae and D. cervicornis than the untreated control, which was dominated by Lobophora variegata, also the dominant algae on the nearby patch reefs. Crustose corallines grew slowly ( approximately 2.5 mm/49 days) and were not influenced by the treatments when grown on vertical surfaces but decreased on horizontal coral plates in the combined organic matter and fertilization treatment. No mortality occurred for the two coral species that were added to the cages. Porites furcata darkened in the fertilized cages while there was a mix of paling and darkening for a small amount of the coral tissue of Diploria labyrinthiformes. Inorganic fertilization stimulates small filamentous turf algae and Symbiodinium living in coral but inhibits brown frondose algae. Organic matter inhibits small herbivorous fish, L. variegata, and encrusting coralline algae when growing on horizontal surfaces.

  20. Holocene core logs and site methods for modern reef and head-coral cores - Dry Tortugas National Park, Florida

    USGS Publications Warehouse

    Hickey, Todd D.; Reich, Christopher D.; DeLong, Kristine L.; Poore, Richard Z.; Brock, John C.

    2013-01-01

    The Dry Tortugas are a series of islands, banks, and channels on a carbonate platform off the west end of the Florida Keys. Antecedent topography of the Dry Tortugas reflects carbonate accumulations of the last interglacial (marine isotope substage 5e, ~ 125,000 years ago, ka) when sea level was ~ 6 to 7 meters (m) higher than present (Schrag and others, 2002). The substage 5e surface was subsequently lithified and modified during subaerial exposure associated with lower sea level from ~ 120 ka to 8 ka. The lithified late Pleistocene carbonates are known as the Key Largo Limestone, a coral reef (Hoffmeister and Multer, 1964; Multer and others, 2002), and the Miami Limestone, a tidal-bar oolite (Sanford, 1909; Hoffmeister, 1974). The Holocene and modern sediments and reefs of the Dry Tortugas then accreted during the rise of sea level associated with the end of the last glacial and the start of the current interglacial (marine isotope Stage 1). With the exception of a half dozen or so islands, the Dry Tortugas region has been submerged for approximately 8,000 years, allowing conditions suitable for coral reef formation once again. The Holocene reef accumulation varies in thickness due to the antecedent topography. The reefs are composed of massive head corals such as species of Montastraea, Siderastrea, and Diploria (Swart and others, 1996; Cohen and McConnaughey, 2003) and rest atop the Pleistocene Key Largo Limestone high (Shinn and others, 1977). The coral reefs within the Dry Tortugas represent a windward reef margin relative to dominant wind and wave energies (Hine and Mullins, 1983; Mallinson and others, 1997; Mallinson and others, 2003).

  1. Development of Miocene-Pliocene reef trend, St. Croix, U. S. Virgin Islands

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gill, I.; Eby, D.E.; Hubbard, D.K.

    1988-01-01

    The Miocene-Pliocene reef trend on St. Croix, U.S. Virgin Islands, rims the present southern western coasts of the island and includes accompanying lagoonal and forereef facies. The reef trend was established on a foram-algal bank facies that represents basinal shallowing from the deep-water pelagic and hemipelagic facies of the Miocene Kingshill Limestone. Information on facies distribution and thickness is derived from rock exposures and 22 test wells drilled to a maximum depth of 91 m. The greatest thickness of the reef facies exists in a subsidiary graben on the south coast of St. Croix. The thickness of the reef sectionmore » in this locality is due to preservation of the section in a downdropped block. Reef faunas include extant corals, as well as several extinct genera. Extant corals (e.g. Montastrea annularis, Diploria sp., and Porites porites) and extinct corals (e.g., Stylophora affinis, Antillea bilobata, and Thysanus sp.) are the main reef frame-builders. Coralline algea and large benthic foraminifera are significant contributors to the sediments both prior to and during scleractinian reef growth. Dolomitization and calcite cementation occur prominantly in an area corresponding to a Holocene lagoon. The spatial distribution of the dolomite suggests that the lagoon is a Tertiary feature directly related to the dolomitization process. Stable isotopic values suggest dolomitization of fluids of elevated salinity.« less

  2. A 80-Year Long Coral-Based Temperature Reconstruction for the Last Interglacial from Northern Hispaniola

    NASA Astrophysics Data System (ADS)

    DeLong, K. L.; Ouellette, G., Jr.; Goodkin, N.; Martin, E. R.; Rosendahl, D. H.; Taylor, F. W.; WU, C. C.; Shen, C. C.

    2016-12-01

    The Last Interglacial (LIG; 117-128 ka), when sea level was 6 m higher than today, can serve as an analog for future climate scenarios, yet minimal paleoclimatic information exists with seasonal to decadal resolution. The island of Hispaniola is a particularly desirable site for producing sea surface temperature (SST) reconstructions, as it displays significant correlations with SST and precipitation anomalies for much of the tropical and North Atlantic Ocean, and Hispaniola is located in the northern sector of the Atlantic Warm Pool (AWP), a primary moisture source for precipitation in the Americas. Here we present an early LIG (128,626 ±438 (2σ) years) monthly-resolved coral Sr/Ca-SST reconstruction from a well-preserved Siderastrea siderea subfossil coral spanning 80 years from the northern coast of Hispaniola (19.913ºN, 70.925ºW). We compare our LIG SST reconstruction with coral Sr/Ca-SST from three modern coral microatolls of the same species, the longest spanning 80 years, recovered near Port-au Prince, Haiti (18.479070°N, 72.668659°W) after the 2010 Haiti earthquake, as well as a 125 ka LIG model simulation spanning 300 years. We find similar mean SST for the LIG (27.4ºC) and modern corals (27.9ºC) that is consistent with MIS 5e reconstructions in the tropical oceans (27.3-29.6ºC); however, these reconstructions are warmer than the LIG model mean SST for our study site (25.6ºC). Seasonal variability is similar (1.5ºC LIG, 1.0-1.7ºC modern) consistent with the findings of LIG coral reconstructions using the tropical Atlantic coral Diploria strigosa and with climate model simulations suggesting orbital insolation changes driving LIG seasonality. However, our LIG coral contains decadal variability (1.7-3.1ºC) not evident in the shorter LIG coral reconstructions or modern SST records and coral reconstructions yet are present in the LIG model simulation for our study site. This decadal variability may reflect variations in the northern extent of the AWP on decadal time scales, which may vary trade wind strength, westward moisture transport to the Americas, and precipitation in the Atlantic.

  3. Multiple driving factors explain spatial and temporal variability in coral calcification rates on the Bermuda platform

    NASA Astrophysics Data System (ADS)

    Venti, A.; Andersson, A.; Langdon, C.

    2014-12-01

    Experimental studies have shown that coral calcification rates are dependent on light, nutrients, food availability, temperature, and seawater aragonite saturation ( Ω arag), but the relative importance of each parameter in natural settings remains uncertain. In this study, we applied Calcein fluorescent dyes as time indicators within the skeleton of coral colonies ( n = 3) of Porites astreoides and Diploria strigosa at three study sites distributed across the northern Bermuda coral reef platform. We evaluated the correlation between seasonal average growth rates based on coral density and extension rates with average temperature, light, and seawater Ω arag in an effort to decipher the relative importance of each parameter. The results show significant seasonal differences among coral calcification rates ranging from summer maximums of 243 ± 58 and 274 ± 57 mmol CaCO3 m-2 d-1 to winter minimums of 135 ± 39 and 101 ± 34 mmol CaCO3 m-2 d-1 for P. astreoides and D. strigosa, respectively. We also placed small coral colonies ( n = 10) in transparent chambers and measured the instantaneous rate of calcification under light and dark treatments at the same study sites. The results showed that the skeletal growth of D. strigosa and P. astreoides, whether hourly or seasonal, was highly sensitive to Ω arag. We believe this high sensitivity, however, is misleading, due to covariance between light and Ω arag, with the former being the strongest driver of calcification variability. For the seasonal data, we assessed the impact that the observed seasonal differences in temperature (4.0 °C), light (5.1 mol photons m-2 d-1), and Ω arag (0.16 units) would have on coral growth rates based on established relationships derived from laboratory studies and found that they could account for approximately 44, 52, and 5 %, respectively, of the observed seasonal change of 81 ± 14 mmol CaCO3 m-2 d-1. Using short-term light and dark incubations, we show how the covariance of light and Ω arag can lead to the false conclusion that calcification is more sensitive to Ω arag than it really is.

  4. Last interglacial temperature seasonality reconstructed from tropical Atlantic corals

    NASA Astrophysics Data System (ADS)

    Brocas, William M.; Felis, Thomas; Obert, J. Christina; Gierz, Paul; Lohmann, Gerrit; Scholz, Denis; Kölling, Martin; Scheffers, Sander R.

    2016-09-01

    Reconstructions of last interglacial (LIG, MIS 5e, ∼127-117 ka) climate offer insights into the natural response and variability of the climate system during a period partially analogous to future climate change scenarios. We present well preserved fossil corals (Diploria strigosa) recovered from the southern Caribbean island of Bonaire (Caribbean Netherlands). These have been precisely dated by the 230Th/U-method to between 130 and 120 ka ago. Annual banding of the coral skeleton enabled construction of time windows of monthly resolved strontium/calcium (Sr/Ca) temperature proxy records. In conjunction with a previously published 118 ka coral record, our eight records of up to 37 years in length, cover a total of 105 years within the LIG period. From these, sea surface temperature (SST) seasonality and variability in the tropical North Atlantic Ocean is reconstructed. We detect similar to modern SST seasonality of ∼2.9 °C during the early (130 ka) and the late LIG (120-118 ka). However, within the mid-LIG, a significantly higher than modern SST seasonality of 4.9 °C (at 126 ka) and 4.1 °C (at 124 ka) is observed. These findings are supported by climate model simulations and are consistent with the evolving amplitude of orbitally induced changes in seasonality of insolation throughout the LIG, irrespective of wider climatic instabilities that characterised this period. The climate model simulations suggest that the SST seasonality changes documented in our LIG coral Sr/Ca records are representative of larger regions within the tropical North Atlantic. These simulations also suggest that the reconstructed SST seasonality increase during the mid-LIG is caused primarily by summer warming. A 124 ka old coral documents, for the first time, evidence of decadal SST variability in the tropical North Atlantic during the LIG, akin to that observed in modern instrumental records.

  5. Inhibition of bacterial quorum sensing by extracts from aquatic fungi: first report from marine endophytes.

    PubMed

    Martín-Rodríguez, Alberto J; Reyes, Fernando; Martín, Jesús; Pérez-Yépez, Juan; León-Barrios, Milagros; Couttolenc, Alan; Espinoza, César; Trigos, Angel; Martín, Víctor S; Norte, Manuel; Fernández, José J

    2014-11-19

    In our search for quorum-sensing (QS) disrupting molecules, 75 fungal isolates were recovered from reef organisms (endophytes), saline lakes and mangrove rhizosphere. Their QS inhibitory activity was evaluated in Chromobacterium violaceum CVO26. Four strains of endophytic fungi stood out for their potent activity at concentrations from 500 to 50 μg mL-1. The molecular characterization, based on the internal transcribed spacer (ITS) region sequences (ITS1, 5.8S and ITS2) between the rRNA of 18S and 28S, identified these strains as belonging to four genera: Sarocladium (LAEE06), Fusarium (LAEE13), Epicoccum (LAEE14), and Khuskia (LAEE21). Interestingly, three came from coral species and two of them came from the same organism, the coral Diploria strigosa. Metabolic profiles obtained by Liquid Chromatography-High Resolution Mass Spectrometry (LC-HRMS) suggest that a combination of fungal secondary metabolites and fatty acids could be the responsible for the observed activities. The LC-HRMS analysis also revealed the presence of potentially new secondary metabolites. This is, to the best of our knowledge, the first report of QS inhibition by marine endophytic fungi.

  6. Inhibition of Bacterial Quorum Sensing by Extracts from Aquatic Fungi: First Report from Marine Endophytes

    PubMed Central

    Martín-Rodríguez, Alberto J.; Reyes, Fernando; Martín, Jesús; Pérez-Yépez, Juan; León-Barrios, Milagros; Couttolenc, Alan; Espinoza, César; Trigos, Ángel; Martín, Víctor S.; Norte, Manuel; Fernández, José J.

    2014-01-01

    In our search for quorum-sensing (QS) disrupting molecules, 75 fungal isolates were recovered from reef organisms (endophytes), saline lakes and mangrove rhizosphere. Their QS inhibitory activity was evaluated in Chromobacterium violaceum CVO26. Four strains of endophytic fungi stood out for their potent activity at concentrations from 500 to 50 μg mL−1. The molecular characterization, based on the internal transcribed spacer (ITS) region sequences (ITS1, 5.8S and ITS2) between the rRNA of 18S and 28S, identified these strains as belonging to four genera: Sarocladium (LAEE06), Fusarium (LAEE13), Epicoccum (LAEE14), and Khuskia (LAEE21). Interestingly, three came from coral species and two of them came from the same organism, the coral Diploria strigosa. Metabolic profiles obtained by Liquid Chromatography-High Resolution Mass Spectrometry (LC-HRMS) suggest that a combination of fungal secondary metabolites and fatty acids could be the responsible for the observed activities. The LC-HRMS analysis also revealed the presence of potentially new secondary metabolites. This is, to the best of our knowledge, the first report of QS inhibition by marine endophytic fungi. PMID:25415350

  7. Do Different Massive Corals from the Same Reef Record the Same Climate Signal? A Test from the Dry Tortugas, Florida Keys

    NASA Astrophysics Data System (ADS)

    Delong, K. L.; Poore, R. Z.; Reich, C. D.; Maupin, C. R.; Quinn, T. M.

    2009-12-01

    Differences in mean values of coral skeletal geochemistry (δ18O, δ13C, Sr/Ca) of different coral genera at the same location have been attributed to result from biological influences or "vital effects" regardless of the source (i.e., growth-related or species specific). We investigate the source of geochemical variability by analyzing ~monthly Sr/Ca variations in two massive corals, Siderastrea siderea and Diploria strigosa, from the same reef in the Dry Tortugas, Florida (24.7°N, 82.8°W) with the same environmental parameters (water depth, clarity, etc.) using similar sampling techniques. These corals have significantly different mean annual linear growth rates (0.44 ±0.06 (1σ) cm/year S. siderea; 0.71 ± 0.08 (1σ) cm/year D. strigosa; n = 68). The mean coral Sr/Ca are significantly different between these species (8.965 ± 0.120 (1σ) mmol/mol S. siderea; 9.196 ± 0.084 (1σ) mmol/mol D. strigosa; n = 284) with the slower growing S. siderea having greater average seasonal variability (0.329 ± 0.007 mmol/mol S. siderea; 0.235 ± 0.008 mmol/mol D. strigosa; n = 24). The weighed linear regression of the ~monthly coral Sr/Ca with in situ monthly mean SST revealed the S. siderea captured the seasonal and interannual variability (r = -0.97, -0.61 monthly and monthly anomalies, respectively, p < 0.95, n = 114). The seasonal variability in the D. strigosa is reduced compared to S. siderea with reduced interannual correlation to in situ SST (r = -0.92, -0.45 monthly and monthly anomalies, respectively, p < 0.95, n = 114). We infer that the reduced seasonal variability in D. strigosa with respect to the S. siderea is related to variable growth in which the sampling method averages a complex time signal contained in the thecal wall. We conclude that the slow growing S. siderea provides a robust reconstruction of mean monthly SST for the Dry Tortugas with no evidence of a growth-related effect, whereas the geochemical signal in D. strigosa appears to be more complex and further studies are need to determine the value of this species for paleoclimate reconstructions.

  8. The role of porosity in discriminating between tsunami and hurricane emplacement of boulders — A case study from the Lesser Antilles, southern Caribbean

    NASA Astrophysics Data System (ADS)

    Spiske, Michaela; Böröcz, Zoltán; Bahlburg, Heinrich

    2008-04-01

    Coastal boulder deposits are a consequence of high-energy wave impacts, such as storms, hurricanes or tsunami. Parameters useful for distinguishing between hurricane and tsunami origins include distance of a deposit from the coast, boulder weight and inferred wave height. In order to investigate the role of porosity on boulder transport and elucidate the distinction between tsunami and hurricane impacts, we performed Archimedean and optical 3D-profilometry measurements for the determination of accurate physical parameters for porous reef and coral limestone boulders from the islands of Aruba, Bonaire and Curaçao (ABC Islands, Netherlands Antilles, Leeward Islands). Subsets of different coral species and lithotypes constituting the boulders were sampled, the physical parameters of boulders were analyzed, and each boulder component was attributed to a certain range of porosity and density. Lowest porosities were observed in calcarenite (5-8%), whereas highest porosities were measured for serpulid reef rock (47-68%). Porous serpulid reef rock (0.8-1.2 g/cm 3) and the coral Diploria sp. (0.6-1.0 g/cm 3) possess the lowest bulk densities, while less porous calcarenite (2.0-2.7 g/cm 3) and the coral Montastrea cavernosa yield the highest bulk density values (1.6-2.7 g/cm 3). The obtained physical parameters were used to calculate boulder weights and both hurricane and tsunami wave heights necessary to initiate transport of these boulders. Boulders are up to 5.6 times lighter than given in previously published data, and hence required minimum hurricane or tsunami waves are lower than hitherto assumed. The calculated wave heights, the high frequency of tropical storms and hurricanes in the southern Caribbean and the occurrence of boulders exclusively on the windward sides of the islands, implicate that for boulders on the ABC Islands a hurricane origin is more likely than a tsunami origin.

  9. Linear extension rates of massive corals from the Dry Tortugas National Park (DRTO), Florida

    USGS Publications Warehouse

    Muslic, Adis; Flannery, Jennifer A.; Reich, Christopher D.; Umberger, Daniel K.; Smoak, Joseph M.; Poore, Richard Z.

    2013-01-01

    Colonies of three coral species, Montastraea faveolata, Diploria strigosa, and Siderastrea siderea, located in the Dry Tortugas National Park (DRTO), Florida, were sampled and analyzed to evaluate annual linear extension rates. Montastraea faveolata had the highest average linear extension and variability in (DRTO: C2 = 0.67 centimeters/year (cm yr-1) ± 0.04, B3 = 0.85 cm yr-1 ± 0.07), followed by D. strigosa (DRTO: C1 = 0.73 cm yr-1 ± 0.04; MK = 0.59 cm yr-1 ± 0.06) and S. siderea (DRTO: A1 = 0.41 cm yr-1 ± 0.03). Intercolony comparison of M. faveolata from DRTO yielded a significant correlation (r = 0.34, df = 67, P = 0.005) and similar long-term patterns. DRTO S. siderea core A1 showed an overall increasing trend (r = 0.61, df = 119, P < 0.0001) in extension rates that correlated significantly with International Comprehensive Ocean/Atmosphere Data Set annual sea-surface temperature (r = 0.42, df = 115, P < 0.0001) and an air temperature record from Key West (r = 0.37, df = 111, P < 0.0001). In conclusion, annual linear extension rates are species specific and potentially influence by long-term variability in sea-surface temperature.

  10. Tiered evidence for three kinds of overwash in the past 1.000 years at Anegada, British Virgin Islands

    NASA Astrophysics Data System (ADS)

    Spiske, M.

    2016-12-01

    Three kinds of extreme waves are evidenced geologically on Anegada, a low-lying island 120 km south of the Puerto Rico Trench: (1) Modern and historical storms: A coral-rubble ridge lining the island's north shore was refreshed by modern storms and was probably emplaced by historical hurricanes. A category 4 storm in 2010 aggraded sandy fans within 50 m of the south shore and stirred up microbial debris in interior salt ponds. (2) Unusual flooding between 1650 and 1800 CE which may resemble the 1755 Lisbon tsunami: A sand-and-shell sheet extends as much as 1.5 km inland. Its shells were derived from an interior marine pond, not from the reef flat. (3) Catastrophic overwash before 1500 CE: Coral clasts, limestone boulders, and carbonate sand were deposited hundreds of meters inland from the north shore. Many of the coral clasts are complete colonies of the brain coral Diploria strigosa on the order of at least 1 m in diameter. The limestone clasts were derived from cemented Pleistocene deposits. Some form elongate fields pendant to likely sources to their north, and others are imbricated slabs that dip to the north. The carbonate sand locally contains articulated valves of the lucine Codakia orbicularis and the conch Lobatus gigas, which today inhabit the sandy shallows between the island's north shore and the fringing reef. All the dated coral clasts, lucines, and conches are older than 1500 CE, and most are in the range 1200-1480 CE. The extreme waves of type (3) were previously ascribed to a tsunami from faulting along the Puerto Rico Trench. We are also evaluating an alternative explanation - a tsunami-like bore from infragravity waves similar to those produced in the Philippines by 2013 Typhoon Haiyan. This abstract was adapted, with permission, from a journal manuscript by B.F. Atwater, U.S. ten Brink, A.L. Cescon, N. Feuillet, Z. Fuentes, R.B., Halley, C. Nuñez, E.G. Reinhardt, J.H. Roger, Y. Sawai, M. Spiske, M.P., Tuttle, Y. Wei, and J. Weil Accardo.

  11. 230Th/U dating of Last Interglacial brain corals from Bonaire (southern Caribbean) using bulk and theca wall material

    NASA Astrophysics Data System (ADS)

    Obert, J. Christina; Scholz, Denis; Felis, Thomas; Brocas, William M.; Jochum, Klaus P.; Andreae, Meinrat O.

    2016-04-01

    We compared the suitability of two skeletal materials of the Atlantic brain coral Diploria strigosa for 230Th/U-dating: the commonly used bulk material comprising all skeletal elements and the denser theca wall material. Eight fossil corals of presumably Last Interglacial age from Bonaire, southern Caribbean Sea, were investigated, and several sub-samples were dated from each coral. For four corals, both the ages and the activity ratios of the bulk material and theca wall agree within uncertainty. Three corals show significantly older ages for their bulk material than for their theca wall material as well as substantially elevated 232Th content and (230Th/238U) ratios. The bulk material samples of another coral show younger ages and lower (230Th/238U) ratios than the corresponding theca wall samples. This coral also contains a considerable amount of 232Th. The application of the available open-system models developed to account for post-depositional diagenetic effects in corals shows that none of the models can successfully be applied to the Bonaire corals. The most likely explanation for this observation is that the assumptions of the models are not fulfilled by our data set. Comparison of the theca wall and bulk material data enables us to obtain information about the open-system processes that affected the corals. The corals showing apparently older ages for their bulk material were probably affected by contamination with a secondary (detrital) phase. The most likely source of the detrital material is carbonate sand. The higher (230Th/232Th) ratio of this material implies that detrital contamination would have a much stronger impact on the ages than a contaminant with a bulk Earth (230Th/232Th) ratio and that the threshold for the commonly applied 232Th reliability criterion would be much lower than the generally used value of 1 ng g-1. The coral showing apparently younger ages for its bulk material was probably influenced by more than one diagenetic process. A potential scenario is a combination of detrital contamination and U addition by secondary pore infillings. Our results show that the dense theca wall material of D. strigosa is generally less affected by post-depositional open-system behaviour and better suited for 230Th/U-dating than the bulk material. This is also obvious from the fact that all ages of theca wall material reflect a Last Interglacial origin (∼125 ka), whereas the bulk material samples are either substantially older or younger. However, for some corals, the 230Th/U-ages and activity ratios of the bulk material and the theca wall samples are similar. This shows that strictly reliable 230Th/U-ages can also be obtained from bulk material samples of exceptionally well-preserved corals. However, the bulk material samples more frequently show elevated activity ratios and ages than the corresponding theca wall samples. Our findings should be generally applicable to brain corals (Mussidae) that are found in tropical oceans worldwide and may enable reliable 230Th/U-dating of fossil corals with similar skeletal architecture, even if their bulk skeleton is altered by diagenesis. The 230Th/U-ages we consider reliable (120-130 ka), along with a recently published age of 118 ka, provide the first comprehensive dating of the elevated lower reef terrace at Bonaire (118-130 ka), which is in agreement in timing and duration with other Last Interglacial records.

  12. Best-fit analysis for future coral reef survivors on Bonaire: A lifeline to the reefs' future in the region

    NASA Astrophysics Data System (ADS)

    Johnson, C. C.; Elswick, E. R.; Beeker, C. D.; Kauffman, E. G.; Budziak, A. T.; Wiegand, N.

    2012-12-01

    Given the decline of Caribbean corals and increases in environmental threats and human stressors to the reef ecosystem, it is imperative to document and establish a biological and environmental baseline inventory of coral recruits and environments in which corals live. Our project investigated the association of corals and water chemistry on the leeward side of Bonaire to test for and assess the hypothesis of ocean acidification affecting one of the healthiest reefs in the Caribbean. A dry island such as Bonaire, with no major river input into the leeward side of the island, provides an ideal location for such an analyses as it yields a relatively pure ocean chemistry signal. A multi-year investigation in Bonaire National Marine Park (BNMP) focused on corals growing on mooring buoy anchors created from cement blocks and cement filled, discarded petroleum barrels. We evaluate the persistence of corals on anchors placed in BNMP in the 1960's and 1970's, taking advantage of the maximum timeline for coral recruits. Recruits initiated in the zone occupied initially by Acropora cervicornis and A. palmata, and persisted through the decline of the once dominant acroporids. Thus, our study can be taken as a natural inoculation experiment under ambient field conditions. We collected 200ml water samples at 25 sites and analyzed samples on the Atomic Absorption Spectrometer Analyst 800 and Dionex IC25 Ion Chromatograph instruments to yield elemental data for water chemistry analyses. Depth pH, temperature, salinity and turbidity were recorded per site in rainy and dry seasons over the 5-year, Nov 2007 - April 2011 study. pH measurements were taken by colorimetric and indicator strips. Biologic data collection focused on coral species identifications per site on mooring anchors but sponges, hydrozoans and algae were also noted. Our research reveals no pH changes in these shallow (12.2m) waters over the duration of the study. pH colorimetric averages were 8.0-8.5 for both April/May and Nov/ Dec collections, and pH litmus 8.0 for all sites, all seasons. We further investigated the association of temperature, salinity and turbidity at site-specific locations and recorded differences in cation and anion water chemistry. Seasonal averages for T are 27.2oC for April/May and 28.1oC for Nov/Dec. Salinity seasonal averages are 37.4ppt for April/May and 36.7ppt for Nov/Dec; Mg/Ca (wt. ratio) exhibits seasonal variation; turbidity was 0 JTU for all sites, all collections. Our bioenvironmental database allows for ordination analysis of coral species with specific water chemistry conditions. Family Faviidae (Diploria labrynthiformis, D. strigosa), with origins in the mid-Jurassic geologic record, dominates the occurrences, followed by Family Poritidae (Porites asteroides) and Family Agariciidae, but great variability exists across sites. Nitrates, nitrites and phosphates, local human stressors, have variable effect on coral presence and persistence. The database provides the best-fit analysis for future survivors under climate change conditions and may be the lifeline to the reefs' future in this region.

  13. Do three massive coral species from the same reef record the same SST signal? A test from the Dry Tortugas, Florida Keys

    USGS Publications Warehouse

    DeLong, K.L.; Poore, R.Z.; Reich, C.D.; Flannery, J.A.; Maupin, Christopher R.; Quinn, T.M.

    2010-01-01

    Paleoclimatologists have reconstructed century-long records of sea surface temperature (SST) in the Pacific using the Sr/Ca of massive corals, whereas similar reconstructions in the Atlantic have not proceeded at the same pace. Past research in the Florida Keys has focused on Montastrea spp., an abundant and fast-growing massive coral, thus a good candidate for climate reconstructions. However, coral records from the Florida Keys are complicated by freshwater flux, which varies the Sr/Ca in seawater, thus confounding the Sr/Ca to SST signal. In this research, we compared the monthly Sr/Ca variations in three massive corals species (Montastraea faveolata, Diploria strigosa, and Siderastrea siderea) from the same reef in the nearly pristine Dry Tortugas National Park (24.70N, 82.80W) at the southwestern extent of the Florida Keys. This location is ideal for a calibration study as hourly water temperature records are available and the remote reef is far from mainland freshwater influence. These corals experienced the same environmental conditions (water depth, clarity, Sr/Ca of seawater, etc.) but differ in the mean annual growth rates (0.86 ±0.10 (1σ) cm/year M. faveolata; 0.67 ±0.04 (1σ) cm/year D. strigosa; 0.44 ±0.04 (1σ) cm/year S. siderea). The mean Sr/Ca values are not the same but decrease with mean annual growth rates (9.201 ±0.091 (1σ) mmol/mol M. faveolata; 9.177 ±0.081 (1σ) mmol/mol D. strigosa; 8.964 ±0.12 (1σ) mmol/mol S. siderea), thus supporting the “vital effect” or biological differences during calcification between coral species. The amplitude of the seasonal cycle in Sr/Ca varies with the slower growing S. sidereahaving the largest mean amplitude and D. strigosa the smallest (0.340 mmol/mol S. siderea; 0.284 mmol/mol M. faveolata; 0.238 mmol/mol D. strigosa). We confirmed our sampling methods by conducting several intracolony and intercolony coral Sr/Ca replication tests and found a high correlation in all tests (>0.95 S. siderea; >0.90 D. strigosa; >0.83 M. faveolata; p < 0.05). The weighted linear regression of monthly coral Sr/Ca to mean monthly SST revealed that S. sidereacaptured the seasonal and interannual variability in SST (r = -0.97, -0.61 monthly and monthly anomalies, respectively, p < 0.05). The other corals have reduced correlation with monthly anomalies and do not capture the seasonal variability with the same fidelity as S. siderea. All three corals were sampled along the thecal wall following the same procedures; however, each coral species has a different skeletal structure, density, and micro-scale growth patterns. We hypothesize the thecal wall of S. siderea calcifies at a continuous rate along the time-growth axis whereas the wall of D. strigosa and M. faveolata reflects a more complex signal. Of the three species, the slow growing S. siderea provides a robust reconstruction of mean monthly SST for the Dry Tortugas thus suitable for longer centennial-scale reconstructions.

  14. Sr/Ca and stable isotopes in a coral from the Venezuelan coast: A record of 20th-century changes in SST, SSS and cloud cover?

    NASA Astrophysics Data System (ADS)

    Hetzinger, S.; Pfeiffer, M.; Dullo, W.; Zinke, J.; Garbe-Schoenberg, C.

    2011-12-01

    We present a record of monthly δ18O and Sr/Ca variations in coral aragonite from a massive Diploria strigosa colony retrieved from a coastal NW-Venezuelan reef site (10.55°N, 67.24°W; 1940-2004). Linear regression of coral proxies to high resolution satellite sea surface temperature (SST) data (NASA OBPG MODIS-Aqua, 9-km resolution) demonstrates that both geochemical proxies record seasonal temperature variability in ambient seawater (Sr/Ca: r=-0.68 monthly, r=-0.60 annual; δ18O: r=-0.57 monthly, r=-0.46 annual; 1985-2004). On longer time scales both proxies record local as well as regional SST dynamics in the southeastern Caribbean and northern North Tropical Atlantic. A statistically significant relationship is observed between coral δ18O and local air temperature (r=-0.56; 1951-2002), while correspondence of δ18O to SST products (e.g. ERSST, SODA reanalysis) is lower than for Sr/Ca ratios. However, coral δ18O is a function of both temperature and δ18Oseawater and δ18Oseawater in turn is dependent on salinity. A comparison of δ18O to sea surface salinity (SSS) data confirms the existence of a strong salinity component in coral δ18O on annual and longer time scales (SODA reanalysis, r=0.65 for annual means, r=0.84 for 3-year average; 1958-2001). A decreasing trend from the mid-1980s onwards is evident in both SSS and coral δ18O, corresponding to trends seen in other Caribbean studies. Further, both geochemical proxies show a significant negative correlation to cloud cover averaged over a regional box (r=-0.66 for Sr/Ca; r=-0.48 for δ18O; 1941-2003). A significant drop in cloud cover is seen around the year 1947, which is displayed in both proxies as a distinct positive peak and coincides with a drop in instrumental SST. Interestingly, a marked decrease in annual coral growth rate is observed in the uppermost years of the core (1999 to 2004), as well as a reduced seasonal amplitude in δ18O variability and a trend to more negative δ18O-values at the same time. This timing coincides with an extreme event that occurred in December 1999, when Venezuela saw its highest monthly rainfall in 100 years, triggering massive landslides, debris flows and flooding along the northern coast of Venezuela. This event, which killed more than 30,000 people and caused massive damage to communities and infrastructure, has also severely influenced local coral reefs, including the study site. Coastal Venezuelan coral reefs in the affected area have seen a steep decline after this event, which is documented in our core by a distinct drop in annual growth rates after December 1999. In summary, this record documents the local and regional history of sea surface and atmospheric conditions with high temporal resolution, as well as local climatic extreme events.

  15. Geologic evidence for catastrophic marine inundation in 1200–1480 C.E. near the Puerto Rico Trench at Anegada, British Virgin Islands

    USGS Publications Warehouse

    Atwater, Brian F.; ten Brink, Uri S.; Cescon, Anna Lisa; Feuillet, Nathalie; Fuentes, Zamara; Halley, Robert B.; Nuñez, Carlos; Reinhardt, Eduard G.; Roger, Jean; Sawai, Yuki; Spiske, Michaela; Tuttle, Martitia P.; Wei, Yong; Weil-Accardo, Jennifer

    2017-01-01

    Extraordinary marine inundation scattered clasts southward on the island of Anegada, 120 km south of the Puerto Rico Trench, sometime between 1200 and 1480 calibrated years (cal yr) CE. Many of these clasts were likely derived from a fringing reef and from the sandy flat that separates the reef from the island’s north shore. The scattered clasts include no fewer than 200 coral boulders, mapped herein for the first time and mainly found hundreds of meters inland. Many of these are complete colonies of the brain coral Diploria strigosa. Other coral species represented include Orbicella (formerly Montastraea) annularis, Porites astreoides, and Acropora palmata. Associated bioclastic carbonate sand locally contains articulated cobble-size valves of the lucine Codakia orbicularis and entire conch shells of Strombus gigas, mollusks that still inhabit the sandy shallows between the island’s north shore and a fringing reef beyond. Imbricated limestone slabs are clustered near some of the coral boulders. In addition, fields of scattered limestone boulders and cobbles near sea level extend mainly southward from limestone sources as much as 1 km inland. Radiocarbon ages have been obtained from 27 coral clasts, 8 lucine valves, and 3 conch shells. All these additional ages predate 1500 cal yr CE, all but 2 are in the range 1000–1500 cal yr CE, and 16 of 22 brain coral ages cluster in the range 1200–1480 cal yr CE. The event marked by these coral and mollusk clasts likely occurred in the last centuries before Columbus (before 1492 CE).The pre-Columbian deposits surpass Anegada’s previously reported evidence for extreme waves in post-Columbian time. The coarsest of the modern storm deposits consist of coral rubble that lines the north shore and sandy fans on the south shore; neither of these storm deposits extends more than 50 m inland. More extensive overwash, perhaps by the 1755 Lisbon tsunami, is marked primarily by a sheet of sand and shells found mainly below sea level beneath the floors of modern salt ponds. This sheet extends more than 1 km southward from the north shore and dates to the interval 1650–1800 cal yr CE. Unlike the pre-Columbian deposits, it lacks coarse clasts from the reef or reef flat; its shell assemblage is instead dominated by cerithid gastropods that were merely stirred up from a marine pond in the island’s interior.In their inland extent and clustered pre-Columbian ages, the coral clasts and associated deposits suggest extreme waves unrivaled in recent millennia at Anegada. Bioclastic sand coats limestone 4 m above sea level in areas 0.7 and 1.3 km from the north shore. A coral boulder of nearly 1 m3 is 3 km from the north shore by way of an unvegetated path near sea level. As currently understood, the extreme flooding evidenced by these and other clasts represents either an extraordinary storm or a tsunami of nearby origin. The storm would need to have produced tsunami-like bores similar to those of 2013 Typhoon Haiyan in the Philippines. Normal faults and a thrust fault provide nearby tsunami sources along the eastern Puerto Rico Trench.

  16. Age of overwash and rate of relative sea-level rise inferred from detrital heads and microatolls of medieval corals at Anegada, British Virgin Islands

    NASA Astrophysics Data System (ADS)

    Jennifer, W.; Feuillet, N.; Robert, H.; Brian, A.; Ten Brink, U. S.; Deschamps, P.; Tuttle, M. P.; Wei, Y.; Fuentes, Z.

    2012-12-01

    Coral boulders deposited on Anegada, an island 120 km south of the Puerto Rico Trench, record overwash dated to AD 1200-1450 and relative sea-level changes that preceded it. Composed largely of Pleistocene limestone, Anegada is less than 8 m above sea level and is fringed on the north and east by a coral reef where Atlantic Ocean waves break. The lowest parts of the island were washed over from the north in AD 1650-1800, as judged from landforms and deposits reported previously (doi:10.1007/s11069-010-9622-6). The coral boulders indicate overwash of higher elevation and earlier age. The boulders were apparently torn from the adjacent reef by a tsunami of nearby origin, as inferred in companion abstracts on geology and modeling. We found the corals scattered in five areas inland from the north shore. Two of the areas show solitary coral heads 1500 m from the reef. The boulders are more numerous in the three other areas, where they are up to 500-700 m from the reef and up to 4 m above sea level. Some were transported over beach ridges or through breaches cut into them. Others are hundreds of meters inland from a modern storm berm. Most rest on the Pleistocene limestone. Many are overturned. Most are broken but few are whole. The largest measured diameter is 2 m and the greatest measured height is 1 m. Most of the boulders are of the brain coral Diploria strigosa, but smaller Porites asteroides and Montastrea annularis are also present. Some of the D. strigosa retain the rounded shape typical of living heads and are dimpled with holes perhaps left by feather-duster worms. The preservation of these features suggests that many of the boulders came ashore alive. We avoided dating a head that shows field evidence for death before transport; an erosional surface cuts across its youngest growth bands and is covered with the remains of encrusting marine organisms. Among the 18 coral boulders dated, 13 form a young group with ages in the range 890±25 to 1020±25 14C yr BP, four form an older group with ages between 1150±35 and 1240±20 14C yr BP, and one is an outlier at 1960±40 14C yr BP. In three of the areas, including those farthest from the reef, all the dated heads are in the young group. The other two areas show a mix of young and older ages. The outlier age was measured on an eroded fragment of the small brain coral Manicina areolata. The ages of the young group correspond to AD 1200-1450 if the local shift in marine-reservoir age (ΔR) was between 0 and -200 14C yr. The mix of ages and degrees of preservation can thus be explained by a single overwash event in AD 1200-1450 that dislodged and brought ashore both live and dead corals. Of the fifty coral boulders observed, at least five have a microatoll shape indicative of outward and upward growth limited by lowest tide level. All five are D. strigosa. Their cup-shaped morphology suggests that relative sea level (RSL) was rising before they died. X-radiography of one of them shows a growth rate of 8 mm/yr and a RSL rise averaging 3-4 mm/yr during the last 70 years before death. This submergence was interrupted by a few centimeter-scale steps of emergence. [Companion abstracts: Atwater, Wei

  17. Geologic evidence for a tsunami source along the trench northeast of Puerto Rico

    NASA Astrophysics Data System (ADS)

    Atwater, B. F.; Ten Brink, U. S.; Feuillet, N.; Fuentes, Z.; Robert, H.; Tuttle, M. P.; Wei, Y.; jennifer, W.

    2012-12-01

    Coral boulders of medieval age at Anegada, British Virgin Islands, calibrated to local geologic effects of far-field tsunamis and hurricanes, provide tangible evidence for the generation of a tsunami by faulting along the eastern Puerto Rico Trench. SETTING: Anegada is 120 km south of the Puerto Rico Trench and 200 km east-northeast of San Juan. It is fringed on the north and east by a coral reef 100-1200 m offshore; founded on Pleistocene carbonate with a cemented cap; rimmed on much of its perimeter by sandy Holocene beach ridges; and bermed with coral-rubble on a rocky stretch of its north shore. CORAL BOULDERS: Scores of coral heads up to 2 m in diameter were moved across the north shore in medieval time. Some crossed the line of the modern storm berm, continued over a limestone rise 4 m above sea level, and came to rest on lower ground hundreds of meters farther south. Others traversed beach ridges, and two of these boulders are now 1.5 km from the fringing reef. Most of the boulders are Diploria strigosa, an endemic of reef flanks. Some retain enough of their originally rounded, dimpled shape to have been deposited live. The likely time of emplacement of freshly dislodged, still-living heads is AD 1200-1450. This range is based on radiocarbon dating of outer growth bands of 18 heads from 5 separate areas. The youngest of the ages is 890±25 14C yr BP, and the ΔR assumed is 0 to -200 14C yr. CALIBRATION TO A FAR-FIELD TSUNAMI: Deposits dated to 1650-1800 at Anegada represent either the largest known far-field tsunami in the Caribbean (1755 Lisbon) or some other tsunami or unusual storm that surpassed the Lisbon tsunami in its local geologic effects. The water cut or freshened breaches in north-shore beach ridges and poured into a marine pond, where it moved limestone boulders and laid down a sheet of sand and shell that extends as much as 1.5 km inland [refs 1-4]. Many of the limestone boulders were probably inherited from the higher, earlier overwash that created the coral-boulder fields. We had expected the coral boulders to date from 1650-1800, but instead obtained only the pre-Columbus ages cited above. CALIBRATION TO HURRICANES: Hurricanes Donna (1960) and Earl (2010) rank below the 1650-1800 overwash in their Anegada effects. Their coarse deposits are limited to sandy spillover fans that extend a few tens of meters inland from the south shore, where Anegada is most vulnerable to storm surge, and to the coral-rubble berm on the north shore, where the medieval overwash ran hundreds of meters farther inland. Both Donna and Earl approached or attained category 4 as their eyes passed within 35 km of the island. If a larger hurricane managed to produce the inland fields of scattered coral boulders, the coral ages limit this perfect storm to pre-Columbus time. NEARBY TSUNAMI SOURCES. The likely source is a belt of normal faults scarps on the outer rise 200 km to Anegada's north. A giant thrust earthquake on the North America - Caribbean plate boundary is unlikely according to a GPS-based model of interplate coupling [5]. No submarine slides are apparent in multibeam bathymetry of the submarine slope that descends northward from Anegada's fringing reef to the Puerto Rico Trench floor [6). COMPANION ABSTRACTS: Coral-boulder ages (Weil Accardo), storm and tsunami modeling (Wei). REFERENCES: [1-4] Natural Hazards 63 (1), 51-149; [5] GRL 39, L10304; [6] Eos 85 (37), 349.

  18. Holocene Core Logs and Site Statistics for Modern Patch-Reef Cores: Biscayne National Park, Florida

    USGS Publications Warehouse

    Reich, Christopher D.; Hickey, T. Don; DeLong, Kristine L.; Poore, Richard Z.; Brock, John C.

    2009-01-01

    The bedrock in Biscayne National Park (BNP), a 1,730-square kilometer (km2) region off southeast Florida, consists of Pleistocene (1.8 million years ago (Ma) to 10,000 years ago (ka)) and Holocene (10 ka to present) carbonate rocks (Enos and Perkins, 1977; Halley and others, 1997; Multer and others, 2002). Most of the surficial limestone in BNP, including the islands of the Florida Keys, was formed at ~125 ka during the highstand of marine oxygen-isotope substage 5e, when sea level was approximately 6 meters (m) higher than today (Chappell and Shackleton, 1986; Multer and others, 2002; Lidz and others, 2003; Siddall and others, 2003; Balsillie and Donoghue, 2004). During the substage-5e regression, the entire Florida Platform became exposed. Subaerial exposure lasted for approximately 115,000 years (kyr), which resulted in erosion and enhancement of karst-like features (Lidz and others, 2006). As the Holocene transgression began to flood the Florida shelf ~7 to 6 ka, the bedrock depression under Biscayne Bay began to flood, and Holocene coral and reef debris laid the foundation for the present reef system (Enos and Perkins, 1977; Lighty and others, 1982; Toscano and Macintyre, 2003; Lidz and others, 2006). More than 3,000 patch reefs exist within the BNP boundary. Most contain hermatypic corals of various species such as those belonging to Montastrea, Diploria, Siderastrea, Porites, Acropora, and Agaricia. Patch reefs within BNP have two morphologies: pinnacle and flat top. Experimental Advanced Airborne Research Lidar (EAARL) data collected along the offshore BNP coral reef tract show that these two morphologies are clearly defined both in the high-resolution bathymetry maps produced by the Lidar data and by statistical analyses of the Lidar dataset (Brock and others, 2008). Brock and others (2008) also show that the pinnacle patch reefs are deeper than the more shallow, broad, and flat patch reefs. The control for these two patch-reef morphologies is unclear; however, their shapes may be due to a slightly lowered sea level or a stillstand in the middle-Holocene around 4 ka that caused erosion of the shallower reefs and allowed the deeper reefs to remain unaffected. Lidz and others (2006) have suggested a stillstand around 4 ka that carved a 2.5-kilometer (km)-wide nearshore rock ledge into the seaward side of every island in the Florida Keys. The objectives of this study were to sample living corals to understand the more recent (<200 years) changes in climate and environmental conditions of the area and to investigate the Holocene (in this case, <8,000 years in the Florida Keys) depositional history at progressively deeper patch-reef sites. This report provides statistics for the cores and core sites and a basic lithologic description of these Holocene cores.

  19. Relative sea level variations recorded by coral microatolls over the last two centuries in Martinique and Guadeloupe: implication for seismic hazard

    NASA Astrophysics Data System (ADS)

    Eric, J.; Jennifer, W.; Feuillet, N.; Deschamps, P.; Guy, C.; Paul, T.; Galetzka, J. E.; Jean-Marie, S.; Bruno, H.

    2012-12-01

    The Lesser Antilles arc is a region of high seismic hazard, which results from the convergence of the American and Caribbean plates at 2cm/yr. Several earthquakes of magnitude ≥ 7 have struck the islands in the past. The largest ones (M 8+) occurred four years apart on January 11 1839 and February 8, 1843, offshore Martinique and Guadeloupe respectively. The 1843 event destroyed the town of Pointe-à-Pitre and killed several thousand people. It was probably a megathrust event. To better constrain the seismic hazard induced by this poorly known subduction interface, we have quantified the surface deformations of Lesser Antilles arc recorded by coral skeletons in Martinique and Guadeloupe. Certain coral species form microatolls, whose upwards growth is limited by the yearly lowest tides (Highest Level of Survival- HLS). They act as tide gauges and provide powerful tools to quantify with a precision of few centimeters the sea-level variations induced by tectonic or climatic processes at annual scale over several centuries. We identified several places where microatolls are growing on Martinique, Guadeloupe, Antigua and Barbuda Islands. Several reefs were first surveyed with low altitude helicopter flights. High-resolution aerial photographs were acquired by a drone in some areas, which allowed identifying sites featuring abundant microatolls. Accurate total station mapping of several sites showed that microatolls within the same area recorded the HLS with a precision of about 4±1cm. Several heads were sampled with a hydraulic chain saw along the eastern coast of Martinique and Guadeloupe. Most are Siderastrea Siderea or Diploria strigosa. Using sclerochronology combined with chemical analysis and U/Th dating, we have determined annual growth rates of 5 mm/yr for the former and of ~10mm/year for the latter. During the last two centuries, all microatolls sampled in Martinique recorded a local relative sea level (RSL) rise of ≈ 2-3 mm/yr, interrupted by sudden emergence events of few centimeters occurring 10 to 25 years apart. The oldest microatoll has a complex morphology and may have been emerged and partly killed by the l839 earthquake. In Guadeloupe, closer to the trench, the signal obtained on four microatolls sampled in 2011 seems different. Preliminary results obtained on a 86 year-old head, show that it grew laterally in stable conditions during ~30 years between 1941 and 1967. Then, it recorded a 6 mm/yr rise of RSL until its death in 1999, which coincided with the Lenny hurricane. All microatolls must have accommodated the local sea-level rise that was estimated by satellite altimetry, over the last twenty years, at 1-2mm/yr and 2-5mm/yr in Martinique and Guadeloupe, respectively. However, the differences between HLS curves and the complex coral morphology, such as eroded plateaus or sudden high rate growth, suggest that microatolls may also have recorded a tectonic signal related to transient slip along the subduction zone, or motion on more local faults.

  20. Coral transplantation triggers shift in microbiome and promotion of coral disease associated potential pathogens

    PubMed Central

    Casey, Jordan M.; Connolly, Sean R.; Ainsworth, Tracy D.

    2015-01-01

    By cultivating turf algae and aggressively defending their territories, territorial damselfishes in the genus Stegastes play a major role in shaping coral-algal dynamics on coral reefs. The epilithic algal matrix (EAM) inside Stegastes’ territories is known to harbor high abundances of potential coral disease pathogens. To determine the impact of territorial grazers on coral microbial assemblages, we established a coral transplant inside and outside of Stegastes’ territories. Over the course of one year, the percent mortality of transplanted corals was monitored and coral samples were collected for microbial analysis. As compared to outside damselfish territories, Stegastes were associated with a higher rate of mortality of transplanted corals. However, 16S rDNA sequencing revealed that territorial grazers do not differentially impact the microbial assemblage of corals exposed to the EAM. Regardless of Stegastes presence or absence, coral transplantation resulted in a shift in the coral-associated microbial community and an increase in coral disease associated potential pathogens. Further, transplanted corals that suffer low to high mortality undergo a microbial transition from a microbiome similar to that of healthy corals to that resembling the EAM. These findings demonstrate that coral transplantation significantly impacts coral microbial communities, and transplantation may increase susceptibility to coral disease. PMID:26144865

  1. Bacterial community dynamics are linked to patterns of coral heat tolerance

    NASA Astrophysics Data System (ADS)

    Ziegler, Maren; Seneca, Francois O.; Yum, Lauren K.; Palumbi, Stephen R.; Voolstra, Christian R.

    2017-02-01

    Ocean warming threatens corals and the coral reef ecosystem. Nevertheless, corals can be adapted to their thermal environment and inherit heat tolerance across generations. In addition, the diverse microbes that associate with corals have the capacity for more rapid change, potentially aiding the adaptation of long-lived corals. Here, we show that the microbiome of reef corals is different across thermally variable habitats and changes over time when corals are reciprocally transplanted. Exposing these corals to thermal bleaching conditions changes the microbiome for heat-sensitive corals, but not for heat-tolerant corals growing in habitats with natural high heat extremes. Importantly, particular bacterial taxa predict the coral host response in a short-term heat stress experiment. Such associations could result from parallel responses of the coral and the microbial community to living at high natural temperatures. A competing hypothesis is that the microbial community and coral heat tolerance are causally linked.

  2. Cryptic effects of habitat declines: coral-associated fishes avoid coral-seaweed interactions due to visual and chemical cues.

    PubMed

    Brooker, Rohan M; Brandl, Simon J; Dixson, Danielle L

    2016-01-04

    Seaweed-dominated coral reefs are becoming increasingly common as environmental conditions shift away from those required by corals and toward those ideal for rampant seaweed growth. How coral-associated organisms respond to seaweed will not only impact their fate following environmental change but potentially also the trajectories of the coral communities on which they rely. However, behavioral responses by coral-associated organisms to seaweeds are poorly understood. This study examined interactions between a guild of obligate and opportunistic coral-feeding butterflyfishes (Chaetodontidae) and scleractinian corals to determine whether fishes continue to interact with corals in contact with seaweed or if they are avoided. Under natural conditions, all species interacted almost exclusively with seaweed-free corals. In a controlled patch reef experiment, fishes avoided corals in physical contact with seaweed, irrespective of dietary preferences. When visual seaweed cues were removed, butterflyfish continued to avoid corals that had been in contact with the allelopathic Galaxaura filamentosa, suggesting that chemical cues produced by coral-seaweed interactions are repellent. These findings suggest that, due to deleterious visual and chemical cues produced by coral-seaweed interactions, coral-associated organisms may struggle to locate resources as seaweed-free corals decline in abundance.

  3. Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral.

    PubMed

    Pinzón, Jorge H; Kamel, Bishoy; Burge, Colleen A; Harvell, C Drew; Medina, Mónica; Weil, Ernesto; Mydlarz, Laura D

    2015-04-01

    Climate change is negatively affecting the stability of natural ecosystems, especially coral reefs. The dissociation of the symbiosis between reef-building corals and their algal symbiont, or coral bleaching, has been linked to increased sea surface temperatures. Coral bleaching has significant impacts on corals, including an increase in disease outbreaks that can permanently change the entire reef ecosystem. Yet, little is known about the impacts of coral bleaching on the coral immune system. In this study, whole transcriptome analysis of the coral holobiont and each of the associate components (i.e. coral host, algal symbiont and other associated microorganisms) was used to determine changes in gene expression in corals affected by a natural bleaching event as well as during the recovery phase. The main findings include evidence that the coral holobiont and the coral host have different responses to bleaching, and the host immune system appears suppressed even a year after a bleaching event. These results support the hypothesis that coral bleaching changes the expression of innate immune genes of corals, and these effects can last even after recovery of symbiont populations. Research on the role of immunity on coral's resistance to stressors can help make informed predictions on the future of corals and coral reefs.

  4. Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral

    PubMed Central

    Pinzón, Jorge H.; Kamel, Bishoy; Burge, Colleen A.; Harvell, C. Drew; Medina, Mónica; Weil, Ernesto; Mydlarz, Laura D.

    2015-01-01

    Climate change is negatively affecting the stability of natural ecosystems, especially coral reefs. The dissociation of the symbiosis between reef-building corals and their algal symbiont, or coral bleaching, has been linked to increased sea surface temperatures. Coral bleaching has significant impacts on corals, including an increase in disease outbreaks that can permanently change the entire reef ecosystem. Yet, little is known about the impacts of coral bleaching on the coral immune system. In this study, whole transcriptome analysis of the coral holobiont and each of the associate components (i.e. coral host, algal symbiont and other associated microorganisms) was used to determine changes in gene expression in corals affected by a natural bleaching event as well as during the recovery phase. The main findings include evidence that the coral holobiont and the coral host have different responses to bleaching, and the host immune system appears suppressed even a year after a bleaching event. These results support the hypothesis that coral bleaching changes the expression of innate immune genes of corals, and these effects can last even after recovery of symbiont populations. Research on the role of immunity on coral's resistance to stressors can help make informed predictions on the future of corals and coral reefs. PMID:26064625

  5. Spectral response of the coral rubble, living corals, and dead corals: study case on the Spermonde Archipelago, Indonesia

    NASA Astrophysics Data System (ADS)

    Nurdin, Nurjannah; Komatsu, Teruhisa; Yamano, Hiroya; Arafat, Gulam; Rani, Chair; Akbar AS, M.

    2012-10-01

    Coral reefs play important ecological services such as providing foods, biodiversity, nutrient recycling etc. for human society. On the other hand, they are threatened by human impacts such as illegal fishing and environmental changes such as rises of sea water temperature and sea level due to global warming. Thus, it is very important to monitor dynamic spatial distributions of coral reefs and related habitats such as coral rubble, dead coral, bleached corals, seagrass, etc. Hyperspectral data, in particular, offer high potential for characterizing and mapping coral reefs because of their capability to identify individual reef components based on their detailed spectral response. We studied the optical properties by measuring in situ spectra of living corals, dead coral and coral rubble covered with algae. Study site was selected in Spermonde archipelago, South Sulawesi, Indonesia because this area is included in the highest diversity of corals in the world named as Coral Triangle, which is recognized as the global centre of marine biodiversity and a global priority for conservation. Correlation analysis and cluster analysis support that there are distinct differences in reflectance spectra among categories. Common spectral characteristic of living corals, dead corals and coral rubble covered with algae was a reflectance minimum at 674 nm. Healthy corals, dead coral covered with algae and coral rubble covered with algae showed high similarity of spectral reflectance. It is estimated that this is due to photsynthetic pigments.

  6. Macroalgae Decrease Growth and Alter Microbial Community Structure of the Reef-Building Coral, Porites astreoides

    PubMed Central

    Vega Thurber, Rebecca; Burkepile, Deron E.; Correa, Adrienne M. S.; Thurber, Andrew R.; Shantz, Andrew A.; Welsh, Rory; Pritchard, Catharine; Rosales, Stephanie

    2012-01-01

    With the continued and unprecedented decline of coral reefs worldwide, evaluating the factors that contribute to coral demise is of critical importance. As coral cover declines, macroalgae are becoming more common on tropical reefs. Interactions between these macroalgae and corals may alter the coral microbiome, which is thought to play an important role in colony health and survival. Together, such changes in benthic macroalgae and in the coral microbiome may result in a feedback mechanism that contributes to additional coral cover loss. To determine if macroalgae alter the coral microbiome, we conducted a field-based experiment in which the coral Porites astreoides was placed in competition with five species of macroalgae. Macroalgal contact increased variance in the coral-associated microbial community, and two algal species significantly altered microbial community composition. All macroalgae caused the disappearance of a γ-proteobacterium previously hypothesized to be an important mutualist of P. astreoides. Macroalgal contact also triggered: 1) increases or 2) decreases in microbial taxa already present in corals, 3) establishment of new taxa to the coral microbiome, and 4) vectoring and growth of microbial taxa from the macroalgae to the coral. Furthermore, macroalgal competition decreased coral growth rates by an average of 36.8%. Overall, this study found that competition between corals and certain species of macroalgae leads to an altered coral microbiome, providing a potential mechanism by which macroalgae-coral interactions reduce coral health and lead to coral loss on impacted reefs. PMID:22957055

  7. Macroalgae decrease growth and alter microbial community structure of the reef-building coral, Porites astreoides.

    PubMed

    Vega Thurber, Rebecca; Burkepile, Deron E; Correa, Adrienne M S; Thurber, Andrew R; Shantz, Andrew A; Welsh, Rory; Pritchard, Catharine; Rosales, Stephanie

    2012-01-01

    With the continued and unprecedented decline of coral reefs worldwide, evaluating the factors that contribute to coral demise is of critical importance. As coral cover declines, macroalgae are becoming more common on tropical reefs. Interactions between these macroalgae and corals may alter the coral microbiome, which is thought to play an important role in colony health and survival. Together, such changes in benthic macroalgae and in the coral microbiome may result in a feedback mechanism that contributes to additional coral cover loss. To determine if macroalgae alter the coral microbiome, we conducted a field-based experiment in which the coral Porites astreoides was placed in competition with five species of macroalgae. Macroalgal contact increased variance in the coral-associated microbial community, and two algal species significantly altered microbial community composition. All macroalgae caused the disappearance of a γ-proteobacterium previously hypothesized to be an important mutualist of P. astreoides. Macroalgal contact also triggered: 1) increases or 2) decreases in microbial taxa already present in corals, 3) establishment of new taxa to the coral microbiome, and 4) vectoring and growth of microbial taxa from the macroalgae to the coral. Furthermore, macroalgal competition decreased coral growth rates by an average of 36.8%. Overall, this study found that competition between corals and certain species of macroalgae leads to an altered coral microbiome, providing a potential mechanism by which macroalgae-coral interactions reduce coral health and lead to coral loss on impacted reefs.

  8. Big Data Approaches To Coral-Microbe Symbiosis

    NASA Astrophysics Data System (ADS)

    Zaneveld, J.; Pollock, F. J.; McMinds, R.; Smith, S.; Payet, J.; Hanna, B.; Welsh, R.; Foster, A.; Ohdera, A.; Shantz, A. A.; Burkepile, D. E.; Maynard, J. A.; Medina, M.; Vega Thurber, R.

    2016-02-01

    Coral reefs face increasing challenges worldwide, threatened by overfishing and nutrient pollution, which drive growth of algal competitors of corals, and periods of extreme temperature, which drive mass coral bleaching. I will discuss two projects that examine how coral's complex relationships with microorganisms affect the response of coral colonies and coral species to environmental challenge. Microbiological studies have documented key roles for coral's microbial symbionts in energy harvest and defense against pathogens. However, the evolutionary history of corals and their microbes is little studied. As part of the Global Coral Microbiome Project, we are characterizing bacterial, archaeal, fungal, and Symbiodinium diversity across >1400 DNA samples from all major groups of corals, collected from 15 locations worldwide. This collection will allow us to ask how coral- microbe associations evolved over evolutionary time, and to determine whether microbial symbiosis helps predict the relative vulnerability of certain coral species to environmental stress. In the second project, we experimentally characterized how the long-term effects of human impacts such as overfishing and nutrient pollution influence coral-microbe symbiosis. We conducted a three-year field experiment in the Florida Keys applying nutrient pollution or simulated overfishing to reef plots, and traced the effects on reef communities, coral microbiomes, and coral health. The results show that extremes of temperature and algal competition destabilize coral microbiomes, increasing pathogen blooms, coral disease, and coral death. Surprisingly, these local stressors interacted strongly with thermal stress: the greatest microbiome disruption, and >80% of coral mortality happened in the hottest periods. Thus, overfishing and nutrient pollution may interact with increased climate-driven episodes of sub-bleaching thermal stress to increase coral mortality by disrupt reef communities down to microbial scales.

  9. Cryptic effects of habitat declines: coral-associated fishes avoid coral-seaweed interactions due to visual and chemical cues

    PubMed Central

    Brooker, Rohan M.; Brandl, Simon J.; Dixson, Danielle L.

    2016-01-01

    Seaweed-dominated coral reefs are becoming increasingly common as environmental conditions shift away from those required by corals and toward those ideal for rampant seaweed growth. How coral-associated organisms respond to seaweed will not only impact their fate following environmental change but potentially also the trajectories of the coral communities on which they rely. However, behavioral responses by coral-associated organisms to seaweeds are poorly understood. This study examined interactions between a guild of obligate and opportunistic coral-feeding butterflyfishes (Chaetodontidae) and scleractinian corals to determine whether fishes continue to interact with corals in contact with seaweed or if they are avoided. Under natural conditions, all species interacted almost exclusively with seaweed-free corals. In a controlled patch reef experiment, fishes avoided corals in physical contact with seaweed, irrespective of dietary preferences. When visual seaweed cues were removed, butterflyfish continued to avoid corals that had been in contact with the allelopathic Galaxaura filamentosa, suggesting that chemical cues produced by coral-seaweed interactions are repellent. These findings suggest that, due to deleterious visual and chemical cues produced by coral-seaweed interactions, coral-associated organisms may struggle to locate resources as seaweed-free corals decline in abundance. PMID:26725835

  10. A coral-on-a-chip microfluidic platform enabling live-imaging microscopy of reef-building corals.

    PubMed

    Shapiro, Orr H; Kramarsky-Winter, Esti; Gavish, Assaf R; Stocker, Roman; Vardi, Assaf

    2016-03-04

    Coral reefs, and the unique ecosystems they support, are facing severe threats by human activities and climate change. Our understanding of these threats is hampered by the lack of robust approaches for studying the micro-scale interactions between corals and their environment. Here we present an experimental platform, coral-on-a-chip, combining micropropagation and microfluidics to allow direct microscopic study of live coral polyps. The small and transparent coral micropropagates are ideally suited for live-imaging microscopy, while the microfluidic platform facilitates long-term visualization under controlled environmental conditions. We demonstrate the usefulness of this approach by imaging coral micropropagates at previously unattainable spatio-temporal resolutions, providing new insights into several micro-scale processes including coral calcification, coral-pathogen interaction and the loss of algal symbionts (coral bleaching). Coral-on-a-chip thus provides a powerful method for studying coral physiology in vivo at the micro-scale, opening new vistas in coral biology.

  11. 50 CFR 665.463 - Prohibitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Mariana precious coral MUS in any Mariana precious coral permit area, unless a permit has been issued for..., take, or retain any species of Mariana precious coral MUS in any Mariana precious coral permit area: (1...) Take and retain, possess, or land any live pink coral or live black coral from any precious coral...

  12. 50 CFR 665.463 - Prohibitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Mariana precious coral MUS in any Mariana precious coral permit area, unless a permit has been issued for..., take, or retain any species of Mariana precious coral MUS in any Mariana precious coral permit area: (1...) Take and retain, possess, or land any live pink coral or live black coral from any precious coral...

  13. 50 CFR 665.463 - Prohibitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Mariana precious coral MUS in any Mariana precious coral permit area, unless a permit has been issued for..., take, or retain any species of Mariana precious coral MUS in any Mariana precious coral permit area: (1...) Take and retain, possess, or land any live pink coral or live black coral from any precious coral...

  14. 50 CFR 665.463 - Prohibitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Mariana precious coral MUS in any Mariana precious coral permit area, unless a permit has been issued for..., take, or retain any species of Mariana precious coral MUS in any Mariana precious coral permit area: (1...) Take and retain, possess, or land any live pink coral or live black coral from any precious coral...

  15. 50 CFR 665.463 - Prohibitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Mariana precious coral MUS in any Mariana precious coral permit area, unless a permit has been issued for..., take, or retain any species of Mariana precious coral MUS in any Mariana precious coral permit area: (1...) Take and retain, possess, or land any live pink coral or live black coral from any precious coral...

  16. Contact with turf algae alters the coral microbiome: contact versus systemic impacts

    NASA Astrophysics Data System (ADS)

    Pratte, Zoe A.; Longo, Guilherme O.; Burns, Andrew S.; Hay, Mark E.; Stewart, Frank J.

    2018-03-01

    Coral reefs are degrading to algae-dominated reefs worldwide, with alterations of coral microbiomes commonly co-occurring with reef demise. The severe thermal anomaly during the 2016 El Niño event in the South Pacific killed many corals and stressed others. We examined the microbiome of turf algae and of the coral Porites sp. in contact with turf during this thermal event to investigate algal turf effects on the coral microbiome during a period of environmental stress. The microbial composition of turf did not differ between coral-contacted and non-contacted turfs. However, microbiomes of corals in direct contact with turf were similar to those of the turf microbiome, but differed significantly from coral portions 5 cm from the point of turf/coral contact and from portions of the coral that looked most healthy, regardless of location. Although the majority of significant differences occurred in coral samples at the point of contact, a small subset of microbial taxa was enriched in coral tissues taken 5 cm from turf contact compared to all other sample types, including samples from areas of the coral that appeared most healthy. These results suggest that the coral microbiome is susceptible to colonization by microbes from turf, but not vice versa. Results also suggest that algal contact elicits a subtle shift in the coral microbiome just beyond the contact site. The combination of turf microbiome stability and coral microbiome vulnerability at areas of contact may contribute to the continued decline in coral cover and increase in algal cover associated with coral-algae phase shifts.

  17. Horizontal transmission of Symbiodinium cells between adult and juvenile corals is aided by benthic sediment

    NASA Astrophysics Data System (ADS)

    Nitschke, Matthew R.; Davy, Simon K.; Ward, Selina

    2016-03-01

    Of all reef-building coral species, 80-85 % initially draw their intracellular symbionts (dinoflagellates of the genus Symbiodinium) from the environment. Although Symbiodinium cells are crucial for the growth of corals and the formation of coral reefs, little is known about how corals first encounter free-living Symbiodinium cells. We report how the supply of free-living Symbiodinium cells to the benthos by adult corals can increase the rate of horizontal symbiont acquisition for conspecific recruits. Three species of newly settled aposymbiotic (i.e., symbiont-free) corals were maintained in an open aquarium system containing: sterilized sediment and adult coral fragments combined; adult coral fragments alone; sterilized sediment alone; or seawater at Heron Island, Great Barrier Reef, Australia. In all instances, the combination of an adult coral and sediment resulted in the highest symbiont acquisition rates by juvenile corals (up to five-fold greater than seawater alone). Juvenile corals exposed to individual treatments of adult coral or sediment produced an intermediate acquisition response (<52 % of recruits), and symbiont acquisition from unfiltered seawater was comparatively low (<20 % of recruits). Additionally, benthic free-living Symbiodinium cells reached their highest densities in the adult coral + sediment treatment (up to 1.2 × 104 cells mL-1). Our results suggest that corals seed microhabitats with free-living Symbiodinium cells suitable for many coral species during the process of coral recruitment.

  18. [Progress of heterotrophic studies on symbiotic corals].

    PubMed

    Yang, Yang-Chu-Qiao; Hong, Wen Ting; Wang, Shu Hong

    2017-12-01

    Heterotrophy of zooxanthellae symbiotic corals refers to the nutrition directly coming from food absorption, not the nutrition obtained from photosynthesis. Most ex situ propagation of symbiotic corals focused on the effects of irradiation, flow rate and water quality on corals, few of them involved in the demand and supply of coral heterotrophic nutrition. This paper reviewed the significance of heterotrophic nutrient supply to symbiotic corals from the sources of coral heterotrophic nutrition, the factors affecting the supply of coral heterotrophic nutrient, and the methods of how to study the coral heterotrophy. In general, the research of coral heterotrophy is just at the beginning stage, and future studies should focus on the inherent mechanism of coral feeding selection and developing more effective research methods.

  19. 50 CFR 665.663 - Prohibitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ..., possess or land PRIA precious coral MUS in any precious coral permit area, unless a permit has been issued..., take, or retain any species of PRIA precious coral MUS in any precious coral permit area: (1) By means... retain, possess, or land any live pink coral or live black coral from any precious coral permit area that...

  20. 50 CFR 665.663 - Prohibitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ..., possess or land PRIA precious coral MUS in any precious coral permit area, unless a permit has been issued..., take, or retain any species of PRIA precious coral MUS in any precious coral permit area: (1) By means... retain, possess, or land any live pink coral or live black coral from any precious coral permit area that...

  1. 50 CFR 665.163 - Prohibitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... precious coral in any precious coral permit area, unless a permit has been issued for that vessel and area... species of American Samoa precious coral MUS in any precious coral permit area: (1) By means of gear or... land any live pink coral or live black coral from any precious coral permit area that is less than the...

  2. 50 CFR 665.163 - Prohibitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... precious coral in any precious coral permit area, unless a permit has been issued for that vessel and area... species of American Samoa precious coral MUS in any precious coral permit area: (1) By means of gear or... land any live pink coral or live black coral from any precious coral permit area that is less than the...

  3. 50 CFR 665.163 - Prohibitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... precious coral in any precious coral permit area, unless a permit has been issued for that vessel and area... species of American Samoa precious coral MUS in any precious coral permit area: (1) By means of gear or... land any live pink coral or live black coral from any precious coral permit area that is less than the...

  4. 50 CFR 665.163 - Prohibitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... precious coral in any precious coral permit area, unless a permit has been issued for that vessel and area... species of American Samoa precious coral MUS in any precious coral permit area: (1) By means of gear or... land any live pink coral or live black coral from any precious coral permit area that is less than the...

  5. 50 CFR 665.163 - Prohibitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... precious coral in any precious coral permit area, unless a permit has been issued for that vessel and area... species of American Samoa precious coral MUS in any precious coral permit area: (1) By means of gear or... land any live pink coral or live black coral from any precious coral permit area that is less than the...

  6. 50 CFR 665.663 - Prohibitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ..., possess or land PRIA precious coral MUS in any precious coral permit area, unless a permit has been issued..., take, or retain any species of PRIA precious coral MUS in any precious coral permit area: (1) By means... retain, possess, or land any live pink coral or live black coral from any precious coral permit area that...

  7. 50 CFR 665.663 - Prohibitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ..., possess or land PRIA precious coral MUS in any precious coral permit area, unless a permit has been issued..., take, or retain any species of PRIA precious coral MUS in any precious coral permit area: (1) By means... retain, possess, or land any live pink coral or live black coral from any precious coral permit area that...

  8. 50 CFR 665.663 - Prohibitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ..., possess or land PRIA precious coral MUS in any precious coral permit area, unless a permit has been issued..., take, or retain any species of PRIA precious coral MUS in any precious coral permit area: (1) By means... retain, possess, or land any live pink coral or live black coral from any precious coral permit area that...

  9. Thermal tolerances of reef corals in the Gulf: a review of the potential for increasing coral survival and adaptation to climate change through assisted translocation.

    PubMed

    Coles, Steve L; Riegl, Bernhard M

    2013-07-30

    Corals in the Gulf withstand summer temperatures up to 10 °C higher than corals elsewhere and have recovered from extreme temperature events in 10 years or less. This heat-tolerance of Gulf corals has positive implications for the world's coral populations to adapt to increasing water temperatures. However, survival of Gulf corals has been severely tested by 35-37 °C temperatures five times in the last 15 years, each time causing extensive coral bleaching and mortality. Anticipated future temperature increases may therefore challenge survival of already highly stressed Gulf corals. Previously proposed translocation of Gulf corals to introduce temperature-adapted corals outside of the Gulf is assessed and determined to be problematical, and to be considered a tool of last resort. Coral culture and transplantation within the Gulf is feasible for helping maintain coral species populations and preserving genomes and adaptive capacities of Gulf corals that are endangered by future thermal stress events. Copyright © 2012 Elsevier Ltd. All rights reserved.

  10. Beneficial Microorganisms for Corals (BMC): Proposed Mechanisms for Coral Health and Resilience.

    PubMed

    Peixoto, Raquel S; Rosado, Phillipe M; Leite, Deborah Catharine de Assis; Rosado, Alexandre S; Bourne, David G

    2017-01-01

    The symbiotic association between the coral animal and its endosymbiotic dinoflagellate partner Symbiodinium is central to the success of corals. However, an array of other microorganisms associated with coral (i.e., Bacteria, Archaea, Fungi, and viruses) have a complex and intricate role in maintaining homeostasis between corals and Symbiodinium . Corals are sensitive to shifts in the surrounding environmental conditions. One of the most widely reported responses of coral to stressful environmental conditions is bleaching. During this event, corals expel Symbiodinium cells from their gastrodermal tissues upon experiencing extended seawater temperatures above their thermal threshold. An array of other environmental stressors can also destabilize the coral microbiome, resulting in compromised health of the host, which may include disease and mortality in the worst scenario. However, the exact mechanisms by which the coral microbiome supports coral health and increases resilience are poorly understood. Earlier studies of coral microbiology proposed a coral probiotic hypothesis, wherein a dynamic relationship exists between corals and their symbiotic microorganisms, selecting for the coral holobiont that is best suited for the prevailing environmental conditions. Here, we discuss the microbial-host relationships within the coral holobiont, along with their potential roles in maintaining coral health. We propose the term BMC (Beneficial Microorganisms for Corals) to define (specific) symbionts that promote coral health. This term and concept are analogous to the term Plant Growth Promoting Rhizosphere (PGPR), which has been widely explored and manipulated in the agricultural industry for microorganisms that inhabit the rhizosphere and directly or indirectly promote plant growth and development through the production of regulatory signals, antibiotics and nutrients. Additionally, we propose and discuss the potential mechanisms of the effects of BMC on corals, suggesting strategies for the use of this knowledge to manipulate the microbiome, reversing dysbiosis to restore and protect coral reefs. This may include developing and using BMC consortia as environmental "probiotics" to improve coral resistance after bleaching events and/or the use of BMC with other strategies such as human-assisted acclimation/adaption to shifting environmental conditions.

  11. Beneficial Microorganisms for Corals (BMC): Proposed Mechanisms for Coral Health and Resilience

    PubMed Central

    Peixoto, Raquel S.; Rosado, Phillipe M.; Leite, Deborah Catharine de Assis; Rosado, Alexandre S.; Bourne, David G.

    2017-01-01

    The symbiotic association between the coral animal and its endosymbiotic dinoflagellate partner Symbiodinium is central to the success of corals. However, an array of other microorganisms associated with coral (i.e., Bacteria, Archaea, Fungi, and viruses) have a complex and intricate role in maintaining homeostasis between corals and Symbiodinium. Corals are sensitive to shifts in the surrounding environmental conditions. One of the most widely reported responses of coral to stressful environmental conditions is bleaching. During this event, corals expel Symbiodinium cells from their gastrodermal tissues upon experiencing extended seawater temperatures above their thermal threshold. An array of other environmental stressors can also destabilize the coral microbiome, resulting in compromised health of the host, which may include disease and mortality in the worst scenario. However, the exact mechanisms by which the coral microbiome supports coral health and increases resilience are poorly understood. Earlier studies of coral microbiology proposed a coral probiotic hypothesis, wherein a dynamic relationship exists between corals and their symbiotic microorganisms, selecting for the coral holobiont that is best suited for the prevailing environmental conditions. Here, we discuss the microbial-host relationships within the coral holobiont, along with their potential roles in maintaining coral health. We propose the term BMC (Beneficial Microorganisms for Corals) to define (specific) symbionts that promote coral health. This term and concept are analogous to the term Plant Growth Promoting Rhizosphere (PGPR), which has been widely explored and manipulated in the agricultural industry for microorganisms that inhabit the rhizosphere and directly or indirectly promote plant growth and development through the production of regulatory signals, antibiotics and nutrients. Additionally, we propose and discuss the potential mechanisms of the effects of BMC on corals, suggesting strategies for the use of this knowledge to manipulate the microbiome, reversing dysbiosis to restore and protect coral reefs. This may include developing and using BMC consortia as environmental “probiotics” to improve coral resistance after bleaching events and/or the use of BMC with other strategies such as human-assisted acclimation/adaption to shifting environmental conditions. PMID:28326066

  12. A coral-on-a-chip microfluidic platform enabling live-imaging microscopy of reef-building corals

    PubMed Central

    Shapiro, Orr H.; Kramarsky-Winter, Esti; Gavish, Assaf R.; Stocker, Roman; Vardi, Assaf

    2016-01-01

    Coral reefs, and the unique ecosystems they support, are facing severe threats by human activities and climate change. Our understanding of these threats is hampered by the lack of robust approaches for studying the micro-scale interactions between corals and their environment. Here we present an experimental platform, coral-on-a-chip, combining micropropagation and microfluidics to allow direct microscopic study of live coral polyps. The small and transparent coral micropropagates are ideally suited for live-imaging microscopy, while the microfluidic platform facilitates long-term visualization under controlled environmental conditions. We demonstrate the usefulness of this approach by imaging coral micropropagates at previously unattainable spatio-temporal resolutions, providing new insights into several micro-scale processes including coral calcification, coral–pathogen interaction and the loss of algal symbionts (coral bleaching). Coral-on-a-chip thus provides a powerful method for studying coral physiology in vivo at the micro-scale, opening new vistas in coral biology. PMID:26940983

  13. Early-phase dynamics in coral recovery following cyclone disturbance on the inshore Great Barrier Reef, Australia

    NASA Astrophysics Data System (ADS)

    Sato, Yui; Bell, Sara C.; Nichols, Cassandra; Fry, Kent; Menéndez, Patricia; Bourne, David G.

    2018-06-01

    Coral recovery (the restoration of abundance and composition of coral communities) after disturbance is a key process that determines the resilience of reef ecosystems. To understand the mechanisms underlying the recovery process of coral communities, colony abundance and size distribution were followed on reefs around Pelorus Island, located in the inshore central region of the Great Barrier Reef, following a severe tropical cyclone in 2011 that caused dramatic loss of coral communities. Permanent quadrats (600 m2) were monitored biannually between 2012 and 2016, and individual coral colonies were counted, sized and categorized into morphological types. The abundance of coral recruits and coral cover were also examined using permanent quadrats and random line intercept transects, respectively. The number of colonies in the smallest size class (4-10 cm) increased substantially during the study period, driving the recovery of coral populations. The total number of coral colonies 5 yr post-cyclone reached between 73 and 122% of pre-cyclone levels though coral cover remained between 16 and 31% of pre-cyclone levels, due to the dominance of small coral colonies in the recovering communities. Temporal transitions of coral demography (i.e., colony-size distributions) illustrated that the number of recently established coral populations overtook communities of surviving colonies. Coral recruits (< 4 cm in size) also showed increasing patterns in abundance over the study period, underscoring the importance of larval supply in coral recovery. A shift in morphological composition of coral communities was also observed, with the relative abundance of encrusting corals reduced post-cyclone in contrast to their dominance prior to the disturbance. This study identifies the fine-scale processes involved in the initial recovery of coral reefs, providing insights into the dynamics of coral demography that are essential for determining coral reef resilience following major disturbance.

  14. Coral communities of the remote atoll reefs in the Nansha Islands, southern South China Sea.

    PubMed

    Zhao, M X; Yu, K F; Shi, Q; Chen, T R; Zhang, H L; Chen, T G

    2013-09-01

    During the months of May and June in the year 2007, a survey was conducted regarding coral reef communities in the remote atolls (Zhubi Reef and Meiji Reef) of Nansha Islands, southern South China Sea. The goals of the survey were to: (1) for the first time, compile a scleractinian coral check-list; (2) estimate the total richness, coral cover, and growth forms of the community; and (3) describe preliminary patterns of community structure according to geomorphological units. Findings of this survey revealed a total of 120 species of scleractinia belonging to 40 genera, while the average coral cover was 21 %, ranging from less than 10 % to higher than 50 %. Branching and massive corals were also found to be the most important growth forms of the whole coral community, while Acropora, Montipora, and Porites were the three dominant genera in the overall region, with their contributions to total coral cover measuring 21, 22, and 23 %, respectively. Overall, coral communities of the Nansha Islands were in a relative healthy condition with high species diversity and coral cover. Spatial pattern of coral communities existed among various geomorphological units. Mean coral cover was highest in the patch reef within the lagoon, followed by the fore reef slope, reef flat, and lagoon slope. The greatest contributors to total coral cover were branching Acropora (45 %) in the lagoon slope, branching Montipora (44 %) in the reef flat, and massive Porites (51 %) in the patch reef. Coral cover in the fore reef revealed a greater range of genera than in other habitats. The leeward fore reef slope had higher coral cover (> 50 %) when compared with the windward slope (< 10 %). The coral communities of the inner reef flat were characterized by higher coral cover (27 %) and dominant branching Montipora corals, while lower coral cover (4 %) was dominated by Psammocora with massive growth forms on the outer reef flat. Destructive fishing and coral bleaching were two major threats to coral communities in the study area.

  15. Large-amplitude internal waves sustain coral health during thermal stress

    NASA Astrophysics Data System (ADS)

    Schmidt, Gertraud M.; Wall, Marlene; Taylor, Marc; Jantzen, Carin; Richter, Claudio

    2016-09-01

    Ocean warming is a major threat for coral reefs causing widespread coral bleaching and mortality. Potential refugia are thus crucial for coral survival. Exposure to large-amplitude internal waves (LAIW) mitigated heat stress and ensured coral survival and recovery during and after an extreme heat anomaly. The physiological status of two common corals, Porites lutea and Pocillopora meandrina, was monitored in host and symbiont traits, in response to LAIW-exposure throughout the unprecedented 2010 heat anomaly in the Andaman Sea. LAIW-exposed corals of both species survived and recovered, while LAIW-sheltered corals suffered partial and total mortality in P. lutea and P. meandrina, respectively. LAIW are ubiquitous in the tropics and potentially generate coral refuge areas. As thermal stress to corals is expected to increase in a warming ocean, the mechanisms linking coral bleaching to ocean dynamics will be crucial to predict coral survival on a warming planet.

  16. Live coral repels a common reef fish ectoparasite

    NASA Astrophysics Data System (ADS)

    Artim, J. M.; Sikkel, P. C.

    2013-06-01

    Coral reefs are undergoing rapid changes as living corals give way to dead coral on which other benthic organisms grow. This decline in live coral could influence habitat availability for fish parasites with benthic life stages. Gnathiid isopod larvae live in the substratum and are common blood-feeding parasites of reef fishes. We examined substrate associations and preferences of a common Caribbean gnathiid, Gnathia marleyi. Emergence traps set over predominantly live coral substrata captured significantly fewer gnathiids than traps set over dead coral substrata. In laboratory experiments, gnathiids preferred dead coral and sponge and tended to avoid contact with live coral. When live gnathiids were added to containers with dead or live coral, significantly fewer were recovered from the latter after 24 h. Our data therefore suggest that live coral is not suitable microhabitat for parasitic gnathiid isopods and that a decrease in live coral cover increases available habitat for gnathiids.

  17. The cumulative impact of annual coral bleaching can turn some coral species winners into losers.

    PubMed

    Grottoli, Andréa G; Warner, Mark E; Levas, Stephen J; Aschaffenburg, Matthew D; Schoepf, Verena; McGinley, Michael; Baumann, Justin; Matsui, Yohei

    2014-12-01

    Mass coral bleaching events caused by elevated seawater temperatures result in extensive coral loss throughout the tropics, and are projected to increase in frequency and severity. If bleaching becomes an annual event later in this century, more than 90% of coral reefs worldwide may be at risk of long-term degradation. While corals can recover from single isolated bleaching and can acclimate to recurring bleaching events that are separated by multiple years, it is currently unknown if and how they will survive and possibly acclimatize to annual coral bleaching. Here, we demonstrate for the first time that annual coral bleaching can dramatically alter thermal tolerance in Caribbean corals. We found that high coral energy reserves and changes in the dominant algal endosymbiont type (Symbiodinium spp.) facilitated rapid acclimation in Porites divaricata, whereas low energy reserves and a lack of algal phenotypic plasticity significantly increased susceptibility in Porites astreoides to bleaching the following year. Phenotypic plasticity in the dominant endosymbiont type of Orbicella faveolata did not prevent repeat bleaching, but may have facilitated rapid recovery. Thus, coral holobiont response to an isolated single bleaching event is not an accurate predictor of its response to bleaching the following year. Rather, the cumulative impact of annual coral bleaching can turn some coral species 'winners' into 'losers', and can also facilitate acclimation and turn some coral species 'losers' into 'winners'. Overall, these findings indicate that cumulative impact of annual coral bleaching could result in some species becoming increasingly susceptible to bleaching and face a long-term decline, while phenotypically plastic coral species will acclimatize and persist. Thus, annual coral bleaching and recovery could contribute to the selective loss of coral diversity as well as the overall decline of coral reefs in the Caribbean. © 2014 John Wiley & Sons Ltd.

  18. Influence of habitat degradation on fish replenishment

    NASA Astrophysics Data System (ADS)

    McCormick, M. I.; Moore, J. A. Y.; Munday, P. L.

    2010-09-01

    Temperature-induced coral bleaching is a major threat to the biodiversity of coral reef ecosystems. While reductions in species diversity and abundance of fish communities have been documented following coral bleaching, the mechanisms that underlie these changes are poorly understood. The present study examined the impacts of coral bleaching on the early life-history processes of coral reef fishes. Daily monitoring of fish settlement patterns found that ten times as many fish settled to healthy coral than sub-lethally bleached coral. Species diversity of settling fishes was least on bleached coral and greatest on dead coral, with healthy coral having intermediate levels of diversity. Laboratory experiments using light-trap caught juveniles showed that different damselfish species chose among healthy, bleached and dead coral habitats using different combinations of visual and olfactory cues. The live coral specialist, Pomacentrus moluccensis, preferred live coral and avoided bleached and dead coral, using mostly visual cues to inform their habitat choice. The habitat generalist, Pomacentrus amboinensis, also preferred live coral and avoided bleached and dead coral but selected these habitats using both visual and olfactory cues. Trials with another habitat generalist, Dischistodus sp., suggested that vision played a significant role. A 20 days field experiment that manipulated densities of P. moluccensis on healthy and bleached coral heads found an influence of fish density on juvenile weight and growth, but no significant influence of habitat quality. These results suggests that coral bleaching will affect settlement patterns and species distributions by influencing the visual and olfactory cues that reef fish larvae use to make settlement choices. Furthermore, increased fish density within the remaining healthy coral habitats could play an important role in influencing population dynamics.

  19. Context-dependent effects of nutrient loading on the coral-algal mutualism.

    PubMed

    Shantz, Andrew A; Burkepile, Deron E

    2014-07-01

    Human-mediated increases in nutrient availability alter patterns of primary production, impact species diversity, and threaten ecosystem function. Nutrients can also alter community structure by disrupting the relationships between nutrient-sharing mutualists that form the foundation of communities. Given their oligotrophic nature and the dependence of reef-building corals on symbiotic relationships, coral reefs may be particularly vulnerable to excess nutrients. However, individual studies suggest complex, even contradictory, relationships among nutrient availability, coral physiology, and coral growth. Here, we used meta-analysis to establish general patterns of the impact of nitrogen (N) and phosphorus (P) on coral growth and photobiology. Overall, we found that over a wide range of concentrations, N reduced coral calcification 11%, on average, but enhanced metrics of coral photobiology, such as photosynthetic rate. In contrast, P enrichment increased average calcification rates by 9%, likely through direct impacts on the calcification process, but minimally impacted coral photobiology. There were few synergistic impacts of combined N and P on corals, as the nutrients impact corals via different pathways. Additionally, the response of corals to increasing nutrient availability was context dependent, varying with coral taxa and morphology, enrichment source, and nutrient identity. For example, naturally occurring enrichment from fish excretion increased coral growth, while human-mediated enrichment tended to decrease coral growth. Understanding the nuances of the relationship between nutrients and corals may allow for more targeted remediation strategies and suggest how other global change drivers such as overfishing and climate change will shape how nutrient availability impacts corals.

  20. Does seaweed-coral competition make seaweeds more palatable?

    NASA Astrophysics Data System (ADS)

    Longo, G. O.; Hay, M. E.

    2015-03-01

    Seaweed-coral interactions are increasingly common on modern coral reefs, but the dynamics, processes, and mechanisms affecting these interactions are inadequately understood. We investigated the frequency and effect of seaweed-coral contacts for common seaweeds and corals in Belize. Effects on corals were evaluated by measuring the frequency and extent of bleaching when contacted by various seaweeds, and effects on a common seaweed were evaluated by assessing whether contact with coral made the seaweed more palatable to the sea urchin Diadema antillarum. Coral-seaweed contacts were particularly frequent between Agaricia corals and the seaweed Halimeda opuntia, with this interaction being associated with coral bleaching in 95 % of contacts. Pooling across all coral species, H. opuntia was the seaweed most commonly contacting corals and most frequently associated with localized bleaching at the point of contact. Articulated coralline algae, Halimeda tuna and Lobophora variegata also frequently contacted corals and were commonly associated with bleaching. The common corals Agaricia and Porites bleached with similar frequency when contacted by H. opuntia (95 and 90 %, respectively), but Agaricia experienced more damage than Porites when contacted by articulated coralline algae or H. tuna. When spatially paired individuals of H. opuntia that had been in contact with Agaricia and not in contact with any coral were collected from the reefs and offered to D. antillarum, urchins consumed about 150 % more of thalli that had been competing with Agaricia. Contact and non-contact thalli did not differ in nutritional traits (ash-free-dry-mass, C or N concentrations), suggesting that Halimeda chemical defenses may have been compromised by coral-algal contact. If competition with corals commonly enhances seaweed palatability, then the dynamics and nuances of small-scale seaweed-coral-herbivore interactions at coral edges are deserving of greater attention in that such interactions could scale-up to have important consequences for coral resilience and the persistence of reef structure and function.

  1. Vibrio Zinc-Metalloprotease Causes Photoinactivation of Coral Endosymbionts and Coral Tissue Lesions

    PubMed Central

    Sussman, Meir; Mieog, Jos C.; Doyle, Jason; Victor, Steven; Willis, Bette L.; Bourne, David G.

    2009-01-01

    Background Coral diseases are emerging as a serious threat to coral reefs worldwide. Of nine coral infectious diseases, whose pathogens have been characterized, six are caused by agents from the family Vibrionacae, raising questions as to their origin and role in coral disease aetiology. Methodology/Principal Findings Here we report on a Vibrio zinc-metalloprotease causing rapid photoinactivation of susceptible Symbiodinium endosymbionts followed by lesions in coral tissue. Symbiodinium photosystem II inactivation was diagnosed by an imaging pulse amplitude modulation fluorometer in two bioassays, performed by exposing Symbiodinium cells and coral juveniles to non-inhibited and EDTA-inhibited supernatants derived from coral white syndrome pathogens. Conclusion/Significance These findings demonstrate a common virulence factor from four phylogenetically related coral pathogens, suggesting that zinc-metalloproteases may play an important role in Vibrio pathogenicity in scleractinian corals. PMID:19225559

  2. 50 CFR 665.461 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Definitions. Mariana precious coral management unit species means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium regale, Corallium laauense. Gold coral Gerardia spp., Callogorgia...

  3. 50 CFR 665.461 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Definitions. Mariana precious coral management unit species means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium regale, Corallium laauense. Gold coral Gerardia spp., Callogorgia...

  4. 50 CFR 665.461 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Definitions. Mariana precious coral management unit species means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium regale, Corallium laauense. Gold coral Gerardia spp., Callogorgia...

  5. 50 CFR 665.461 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Definitions. Mariana precious coral management unit species means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium regale, Corallium laauense. Gold coral Gerardia spp., Callogorgia...

  6. 50 CFR 665.461 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Definitions. Mariana precious coral management unit species means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium regale, Corallium laauense. Gold coral Gerardia spp., Callogorgia...

  7. Climate change, global warming and coral reefs: modelling the effects of temperature.

    PubMed

    Crabbe, M James C

    2008-10-01

    Climate change and global warming have severe consequences for the survival of scleractinian (reef-building) corals and their associated ecosystems. This review summarizes recent literature on the influence of temperature on coral growth, coral bleaching, and modelling the effects of high temperature on corals. Satellite-based sea surface temperature (SST) and coral bleaching information available on the internet is an important tool in monitoring and modelling coral responses to temperature. Within the narrow temperature range for coral growth, corals can respond to rate of temperature change as well as to temperature per se. We need to continue to develop models of how non-steady-state processes such as global warming and climate change will affect coral reefs.

  8. Corals Form Characteristic Associations with Symbiotic Nitrogen-Fixing Bacteria

    PubMed Central

    Lema, Kimberley A.; Willis, Bette L.

    2012-01-01

    The complex symbiotic relationship between corals and their dinoflagellate partner Symbiodinium is believed to be sustained through close associations with mutualistic bacterial communities, though little is known about coral associations with bacterial groups able to fix nitrogen (diazotrophs). In this study, we investigated the diversity of diazotrophic bacterial communities associated with three common coral species (Acropora millepora, Acropora muricata, and Pocillopora damicormis) from three midshelf locations of the Great Barrier Reef (GBR) by profiling the conserved subunit of the nifH gene, which encodes the dinitrogenase iron protein. Comparisons of diazotrophic community diversity among coral tissue and mucus microenvironments and the surrounding seawater revealed that corals harbor diverse nifH phylotypes that differ between tissue and mucus microhabitats. Coral mucus nifH sequences displayed high heterogeneity, and many bacterial groups overlapped with those found in seawater. Moreover, coral mucus diazotrophs were specific neither to coral species nor to reef location, reflecting the ephemeral nature of coral mucus. In contrast, the dominant diazotrophic bacteria in tissue samples differed among coral species, with differences remaining consistent at all three reefs, indicating that coral-diazotroph associations are species specific. Notably, dominant diazotrophs for all coral species were closely related to the bacterial group rhizobia, which represented 71% of the total sequences retrieved from tissue samples. The species specificity of coral-diazotroph associations further supports the coral holobiont model that bacterial groups associated with corals are conserved. Our results suggest that, as in terrestrial plants, rhizobia have developed a mutualistic relationship with corals and may contribute fixed nitrogen to Symbiodinium. PMID:22344646

  9. 78 FR 15885 - Western Pacific Fisheries; 2013 Annual Catch Limits and Accountability Measures

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-03-13

    ...,512 lb (2,500 kg). Coral. Makapuu Bed--Pink 2,205 lb (1,000 kg). Coral. Makapuu Bed--Bamboo 551 lb (250 kg). Coral. 180 Fathom Bank-- 489 lb (222 kg). Pink Coral. 180 Fathom Bank-- 123 lb (56 kg). Bamboo Coral. Brooks Bank--Pink 979 lb (444 kg). Coral. Brooks Bank--Bamboo 245 lb (111 kg). Coral. Kaena...

  10. Shifts in coral-assemblage composition do not ensure persistence of reef functionality.

    PubMed

    Alvarez-Filip, Lorenzo; Carricart-Ganivet, Juan P; Horta-Puga, Guillermo; Iglesias-Prieto, Roberto

    2013-12-12

    Coral communities are changing rapidly worldwide through loss of coral cover and shifts in species composition. Although many reef-building corals are likely to decline, some weedy opportunistic species might increase in abundance. Here we explore whether the reshuffling of species can maintain ecosystem integrity and functioning. Using four common Caribbean reef-building coral genera we modeled rates of reef construction and complexity. We show that shifting coral assemblages result in rapid losses in coral-community calcification and reef rugosity that are independent of changes in the total abundance of reef corals. These losses are considerably higher than those recently attributed to climate change. Dominance patterns of coral assemblages seem to be the most important driver of the functioning of coral reefs and thus, the future of these ecosystems might depend not only on reductions of local and global stressors, but also on the maintenance of keystone coral species.

  11. 50 CFR 622.73 - Prohibited species.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Coral and Coral Reefs... limit applicable to that vessel. (b) Prohibited coral. Gulf prohibited coral taken as incidental catch... prohibited coral may be landed ashore; however, no person may sell or purchase such prohibited coral. ...

  12. 50 CFR 622.73 - Prohibited species.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ..., DEPARTMENT OF COMMERCE FISHERIES OF THE CARIBBEAN, GULF OF MEXICO, AND SOUTH ATLANTIC Coral and Coral Reefs... limit applicable to that vessel. (b) Prohibited coral. Gulf prohibited coral taken as incidental catch... prohibited coral may be landed ashore; however, no person may sell or purchase such prohibited coral. ...

  13. 50 CFR 665.261 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    .... As used in §§ 665.260 through 665.270: Hawaii precious coral management unit species (Hawaii precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium...

  14. 50 CFR 665.261 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    .... As used in §§ 665.260 through 665.270: Hawaii precious coral management unit species (Hawaii precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium...

  15. 50 CFR 665.261 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    .... As used in §§ 665.260 through 665.270: Hawaii precious coral management unit species (Hawaii precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium...

  16. 50 CFR 665.261 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    .... As used in §§ 665.260 through 665.270: Hawaii precious coral management unit species (Hawaii precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium...

  17. 50 CFR 665.261 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    .... As used in §§ 665.260 through 665.270: Hawaii precious coral management unit species (Hawaii precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium secundum, Corallium...

  18. The Urgent Need for Robust Coral Disease Diagnostics

    PubMed Central

    Pollock, F. Joseph; Morris, Pamela J.; Willis, Bette L.; Bourne, David G.

    2011-01-01

    Coral disease has emerged over recent decades as a significant threat to coral reef ecosystems, with declines in coral cover and diversity of Caribbean reefs providing an example of the potential impacts of disease at regional scales. If similar trends are to be mitigated or avoided on reefs worldwide, a deeper understanding of the factors underlying the origin and spread of coral diseases and the steps that can be taken to prevent, control, or reduce their impacts is required. In recent years, an increased focus on coral microbiology and the application of classic culture techniques and emerging molecular technologies has revealed several coral pathogens that could serve as targets for novel coral disease diagnostic tools. The ability to detect and quantify microbial agents identified as indicators of coral disease will aid in the elucidation of disease causation and facilitate coral disease detection and diagnosis, pathogen monitoring in individuals and ecosystems, and identification of pathogen sources, vectors, and reservoirs. This information will advance the field of coral disease research and contribute knowledge necessary for effective coral reef management. This paper establishes the need for sensitive and specific molecular-based coral pathogen detection, outlines the emerging technologies that could serve as the basis of a new generation of coral disease diagnostic assays, and addresses the unique challenges inherent to the application of these techniques to environmentally derived coral samples. PMID:22028646

  19. Role of endosymbiotic zooxanthellae and coral mucus in the adhesion of the coral-bleaching pathogen Vibrio shiloi to its host.

    PubMed

    Banin, E; Israely, T; Fine, M; Loya, Y; Rosenberg, E

    2001-05-15

    Vibrio shiloi, the causative agent of bleaching the coral Oculina patagonica in the Mediterranean Sea, adheres to its coral host by a beta-D-galactopyranoside-containing receptor on the coral surface. The receptor is present in the coral mucus, since V. shiloi adhered avidly to mucus-coated ELISA plates. Adhesion was inhibited by methyl-beta-D-galactopyranoside. Removal of the mucus from O. patagonica resulted in a delay in adhesion of V. shiloi to the coral, corresponding to regeneration of the mucus. DCMU inhibited the recovery of adhesion of the bacteria to the mucus-depleted corals, indicating that active photosynthesis by the endosymbiotic zooxanthellae was necessary for the synthesis or secretion of the receptor. Further evidence of the role of the zooxanthellae in producing the receptor came from a study of adhesion of V. shiloi to different species of corals. The bacteria failed to adhere to bleached corals and white (azooxanthellate) O. patagonica cave corals, both of which lacked the algae. In addition, V. shiloi adhered to two Mediterranean corals (Madracis and Cladocora) that contained zooxanthellae and did not adhere to two azooxanthellate Mediterranean corals (Phyllangia and Polycyathus). V. shiloi demonstrated positive chemotaxis towards the mucus of O. patagonica. The data demonstrate that endosymbiotic zooxanthellae contribute to the production of coral mucus and that V. shiloi infects only mucus-containing, zooxanthellate corals.

  20. 50 CFR 665.661 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... § 665.661 Definitions. As used in §§ 665.660 through 665.669: PRIA precious coral management unit species (PRIA precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Englishcommon name Scientific name Pink coral (also known as red coral) Corallium...

  1. 50 CFR 622.227 - Adjustment of management measures.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... ATLANTIC Coral, Coral Reefs, and Live/Hard Bottom Habitats of the South Atlantic Region § 622.227 Adjustment of management measures. In accordance with the framework procedures of the FMP for Coral, Coral... following: (a) South Atlantic coral, coral reefs, and live/hard bottom habitats. Definitions of essential...

  2. 50 CFR 665.661 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... § 665.661 Definitions. As used in §§ 665.660 through 665.669: PRIA precious coral management unit species (PRIA precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Englishcommon name Scientific name Pink coral (also known as red coral) Corallium...

  3. 50 CFR 665.661 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... § 665.661 Definitions. As used in §§ 665.660 through 665.669: PRIA precious coral management unit species (PRIA precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Englishcommon name Scientific name Pink coral (also known as red coral) Corallium...

  4. 50 CFR 622.227 - Adjustment of management measures.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... ATLANTIC Coral, Coral Reefs, and Live/Hard Bottom Habitats of the South Atlantic Region § 622.227 Adjustment of management measures. In accordance with the framework procedures of the FMP for Coral, Coral... following: (a) South Atlantic coral, coral reefs, and live/hard bottom habitats. Definitions of essential...

  5. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... palmata) and staghorn (A. cervicornis) corals. 226.216 Section 226.216 Wildlife and Fisheries NATIONAL... (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as... Threatened Corals. The physical feature essential to the conservation of elkhorn and staghorn corals is...

  6. 77 FR 66 - Western Pacific Fisheries; 2012 Annual Catch Limits and Accountability Measures

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-03

    ... proposes annual catch limits for western Pacific bottomfish, crustacean, precious coral, and coral reef... specify ACLs for bottomfish, crustacean, precious coral, and coral reef ecosystem fishery MUS in American... bottomfish, crustacean, precious coral, or coral reef ecosystem MUS in the PRIA because commercial fishing is...

  7. 50 CFR 665.661 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... § 665.661 Definitions. As used in §§ 665.660 through 665.669: PRIA precious coral management unit species (PRIA precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium...

  8. 78 FR 6798 - Western Pacific Fisheries; 2013 Annual Catch Limits and Accountability Measures

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-01-31

    ... proposes annual catch limits for western Pacific bottomfish, crustacean, precious coral, and coral reef... ACLs for bottomfish, crustacean, precious coral, and coral reef ecosystem fishery MUS in American Samoa... to 2012. NMFS is not proposing ACLs for bottomfish, crustacean, precious coral, or coral reef...

  9. 50 CFR 665.661 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... § 665.661 Definitions. As used in §§ 665.660 through 665.669: PRIA precious coral management unit species (PRIA precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: English common name Scientific name Pink coral (also known as red coral) Corallium...

  10. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... palmata) and staghorn (A. cervicornis) corals. 226.216 Section 226.216 Wildlife and Fisheries NATIONAL... (A. cervicornis) corals. Critical habitat is designated for both elkhorn and staghorn corals as... Threatened Corals. The physical feature essential to the conservation of elkhorn and staghorn corals is...

  11. THE CONDITION OF CORAL REEFS IN SOUTH FLORIDA (2000) USING CORAL DISEASE AND BLEACHING AS INDICATORS

    EPA Science Inventory

    The destruction for coral reef habitats is occurring at unprecedented levels. Coral disease epizootics in the Southwestern Atlantic have lead to coral replacement by turf algae, prompting a call to classify some coral species as endangered. In addition, a massive bleaching event ...

  12. The biology and economics of coral growth.

    PubMed

    Osinga, Ronald; Schutter, Miriam; Griffioen, Ben; Wijffels, René H; Verreth, Johan A J; Shafir, Shai; Henard, Stéphane; Taruffi, Maura; Gili, Claudia; Lavorano, Silvia

    2011-08-01

    To protect natural coral reefs, it is of utmost importance to understand how the growth of the main reef-building organisms-the zooxanthellate scleractinian corals-is controlled. Understanding coral growth is also relevant for coral aquaculture, which is a rapidly developing business. This review paper provides a comprehensive overview of factors that can influence the growth of zooxanthellate scleractinian corals, with particular emphasis on interactions between these factors. Furthermore, the kinetic principles underlying coral growth are discussed. The reviewed information is put into an economic perspective by making an estimation of the costs of coral aquaculture.

  13. Vortical ciliary flows actively enhance mass transport in reef corals.

    PubMed

    Shapiro, Orr H; Fernandez, Vicente I; Garren, Melissa; Guasto, Jeffrey S; Debaillon-Vesque, François P; Kramarsky-Winter, Esti; Vardi, Assaf; Stocker, Roman

    2014-09-16

    The exchange of nutrients and dissolved gasses between corals and their environment is a critical determinant of the growth of coral colonies and the productivity of coral reefs. To date, this exchange has been assumed to be limited by molecular diffusion through an unstirred boundary layer extending 1-2 mm from the coral surface, with corals relying solely on external flow to overcome this limitation. Here, we present direct microscopic evidence that, instead, corals can actively enhance mass transport through strong vortical flows driven by motile epidermal cilia covering their entire surface. Ciliary beating produces quasi-steady arrays of counterrotating vortices that vigorously stir a layer of water extending up to 2 mm from the coral surface. We show that, under low ambient flow velocities, these vortices, rather than molecular diffusion, control the exchange of nutrients and oxygen between the coral and its environment, enhancing mass transfer rates by up to 400%. This ability of corals to stir their boundary layer changes the way that we perceive the microenvironment of coral surfaces, revealing an active mechanism complementing the passive enhancement of transport by ambient flow. These findings extend our understanding of mass transport processes in reef corals and may shed new light on the evolutionary success of corals and coral reefs.

  14. Chemically rich seaweeds poison corals when not controlled by herbivores

    PubMed Central

    Rasher, Douglas B.; Hay, Mark E.

    2010-01-01

    Coral reefs are in dramatic global decline, with seaweeds commonly replacing corals. It is unclear, however, whether seaweeds harm corals directly or colonize opportunistically following their decline and then suppress coral recruitment. In the Caribbean and tropical Pacific, we show that, when protected from herbivores, ~40 to 70% of common seaweeds cause bleaching and death of coral tissue when in direct contact. For seaweeds that harmed coral tissues, their lipid-soluble extracts also produced rapid bleaching. Coral bleaching and mortality was limited to areas of direct contact with seaweeds or their extracts. These patterns suggest that allelopathic seaweed-coral interactions can be important on reefs lacking herbivore control of seaweeds, and that these interactions involve lipid-soluble metabolites transferred via direct contact. Seaweeds were rapidly consumed when placed on a Pacific reef protected from fishing but were left intact or consumed at slower rates on an adjacent fished reef, indicating that herbivory will suppress seaweeds and lower frequency of allelopathic damage to corals if reefs retain intact food webs. With continued removal of herbivores from coral reefs, seaweeds are becoming more common. This occurrence will lead to increasing frequency of seaweed-coral contacts, increasing allelopathic suppression of remaining corals, and continuing decline of reef corals. PMID:20457927

  15. Chemically rich seaweeds poison corals when not controlled by herbivores.

    PubMed

    Rasher, Douglas B; Hay, Mark E

    2010-05-25

    Coral reefs are in dramatic global decline, with seaweeds commonly replacing corals. It is unclear, however, whether seaweeds harm corals directly or colonize opportunistically following their decline and then suppress coral recruitment. In the Caribbean and tropical Pacific, we show that, when protected from herbivores, approximately 40 to 70% of common seaweeds cause bleaching and death of coral tissue when in direct contact. For seaweeds that harmed coral tissues, their lipid-soluble extracts also produced rapid bleaching. Coral bleaching and mortality was limited to areas of direct contact with seaweeds or their extracts. These patterns suggest that allelopathic seaweed-coral interactions can be important on reefs lacking herbivore control of seaweeds, and that these interactions involve lipid-soluble metabolites transferred via direct contact. Seaweeds were rapidly consumed when placed on a Pacific reef protected from fishing but were left intact or consumed at slower rates on an adjacent fished reef, indicating that herbivory will suppress seaweeds and lower frequency of allelopathic damage to corals if reefs retain intact food webs. With continued removal of herbivores from coral reefs, seaweeds are becoming more common. This occurrence will lead to increasing frequency of seaweed-coral contacts, increasing allelopathic suppression of remaining corals, and continuing decline of reef corals.

  16. Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching.

    PubMed

    Vega Thurber, Rebecca L; Burkepile, Deron E; Fuchs, Corinne; Shantz, Andrew A; McMinds, Ryan; Zaneveld, Jesse R

    2014-02-01

    Nutrient loading is one of the strongest drivers of marine habitat degradation. Yet, the link between nutrients and disease epizootics in marine organisms is often tenuous and supported only by correlative data. Here, we present experimental evidence that chronic nutrient exposure leads to increases in both disease prevalence and severity and coral bleaching in scleractinian corals, the major habitat-forming organisms in tropical reefs. Over 3 years, from June 2009 to June 2012, we continuously exposed areas of a coral reef to elevated levels of nitrogen and phosphorus. At the termination of the enrichment, we surveyed over 1200 scleractinian corals for signs of disease or bleaching. Siderastrea siderea corals within enrichment plots had a twofold increase in both the prevalence and severity of disease compared with corals in unenriched control plots. In addition, elevated nutrient loading increased coral bleaching; Agaricia spp. of corals exposed to nutrients suffered a 3.5-fold increase in bleaching frequency relative to control corals, providing empirical support for a hypothesized link between nutrient loading and bleaching-induced coral declines. However, 1 year later, after nutrient enrichment had been terminated for 10 months, there were no differences in coral disease or coral bleaching prevalence between the previously enriched and control treatments. Given that our experimental enrichments were well within the ranges of ambient nutrient concentrations found on many degraded reefs worldwide, these data provide strong empirical support to the idea that coastal nutrient loading is one of the major factors contributing to the increasing levels of both coral disease and coral bleaching. Yet, these data also suggest that simple improvements to water quality may be an effective way to mitigate some coral disease epizootics and the corresponding loss of coral cover in the future. © 2013 John Wiley & Sons Ltd.

  17. Trend in coral-algal phase shift in the Mandapam group of islands, Gulf of Mannar Marine Biosphere Reserve, India

    NASA Astrophysics Data System (ADS)

    Machendiranathan, M.; Senthilnathan, L.; Ranith, R.; Saravanakumar, A.; Thangaradjou, T.; Choudhry, S. B.; Sasamal, S. K.

    2016-12-01

    The present study revealed proliferation of macro-algae modifying coral reef ecosystems in a different manner due to diseases and sedimentations in the Mandapam group of islands in the Gulf of Mannar. Benthic surveys were conducted with major attack of seven coral reefs diseases with high sedimentation rate, nine species of fleshy macro-algae ( Turbinaria ornata, Turbinaria conaides, Caulerpa scalpelliformis, Caulerpa racemosa, Kappaphycus alvarezii, Padina gymnosphora, Sargassum wightii, Ulva reticulata and Calurpa lentillifera) proliferation against major corals life forms (Acropora branching, Acropora digitate, Acropora tabulate, coral massive, coral submassive, coral foliose and coral encrusting). The results confirm that diseased corals most favor to macro-algae growth (15.27%) rather than the sedimentation covered corals (8.24 %). In the degradation of coral life forms, massive corals were more highly damaged (7.05%) than any other forms. Within a short period of time (May to September), coral coverage shrank to 17.4% from 21.9%, macro-algae increased 23.51% and the average sedimentation rate attained 77.52 mg cm-2d-1 with persisting coral reef diseases of 17.59%. The Pearson correlation showed that the coral cover decreased with increasing macro-algae growth, which was statistically significant ( r = -0.774, n = 100, P < 0.0005). The proliferation of the various macro-algae C. scalpellifrmis, T. ornata, C. racemosa, T. conaides, U. reticulata, S. wightii, K. alvarezii, P. gymnosphora and C. lentillifera increased with percentages of 6.0, 5.8, 5.7, 4.9, 4.2, 3.7, 2.7 and 1.9, respectively. If this trend continues, the next generation of new recruit corals will undoubtedly lead to a phase shift in Gulf of Mannar corals.

  18. Loss of live coral compromises predator-avoidance behaviour in coral reef damselfish.

    PubMed

    Boström-Einarsson, Lisa; Bonin, Mary C; Munday, Philip L; Jones, Geoffrey P

    2018-05-17

    Tropical reefs have experienced an unprecedented loss of live coral in the past few decades and the biodiversity of coral-dependent species is under threat. Many reef fish species decline in abundance as coral cover is lost, yet the mechanisms responsible for these losses are largely unknown. A commonly hypothesised cause of fish decline is the loss of shelter space between branches as dead corals become overgrown by algae. Here we tested this hypothesis by quantifying changes in predator-avoidance behaviour of a common damselfish, Pomacentrus moluccensis, before and after the death of their coral colony. Groups of P. moluccensis were placed on either healthy or degraded coral colonies, startled using a visual stimulus and their sheltering responses compared over a 7-week period. P. moluccensis stopped sheltering amongst the coral branches immediately following the death of the coral, despite the presence of ample shelter space. Instead, most individuals swam away from the dead coral, potentially increasing their exposure to predators. It appears that the presence of live coral rather than shelter per se is the necessary cue that elicits the appropriate behavioural response to potential predators. The disruption of this link poses an immediate threat to coral-associated fishes on degrading reefs.

  19. Historical baselines of coral cover on tropical reefs as estimated by expert opinion

    PubMed Central

    Cheung, William W.L.; Bruno, John F.

    2018-01-01

    Coral reefs are important habitats that represent global marine biodiversity hotspots and provide important benefits to people in many tropical regions. However, coral reefs are becoming increasingly threatened by climate change, overfishing, habitat destruction, and pollution. Historical baselines of coral cover are important to understand how much coral cover has been lost, e.g., to avoid the ‘shifting baseline syndrome’. There are few quantitative observations of coral reef cover prior to the industrial revolution, and therefore baselines of coral reef cover are difficult to estimate. Here, we use expert and ocean-user opinion surveys to estimate baselines of global coral reef cover. The overall mean estimated baseline coral cover was 59% (±19% standard deviation), compared to an average of 58% (±18% standard deviation) estimated by professional scientists. We did not find evidence of the shifting baseline syndrome, whereby respondents who first observed coral reefs more recently report lower estimates of baseline coral cover. These estimates of historical coral reef baseline cover are important for scientists, policy makers, and managers to understand the extent to which coral reefs have become depleted and to set appropriate recovery targets. PMID:29379692

  20. Effectiveness of coral relocation as a mitigation strategy in Kāne‘ohe Bay, Hawai‘i

    PubMed Central

    Rodgers, Ku’ulei S.; Lorance, Koi; Richards Donà, Angela; Stender, Yuko

    2017-01-01

    Coral reef restoration and management techniques are in ever-increasing demand due to the global decline of coral reefs in the last several decades. Coral relocation has been established as an appropriate restoration technique in select cases, particularly where corals are scheduled for destruction. However, continued long-term monitoring of recovery of transplanted corals is seldom sustained. Removal of coral from a navigation channel and relocation to a similar nearby dredged site occurred in 2005. Coral recovery at the donor site and changes in fish populations at the receiving site were tracked periodically over the following decade. Coral regrowth at the donor site was rapid until a recent bleaching event reduced coral cover by more than half. The transplant of mature colonies increased spatial complexity at the receiving site, immediately increasing fish biomass, abundance, and species that was maintained throughout subsequent surveys. Our research indicates that unlike the majority of historical accounts of coral relocation in the Pacific, corals transplanted into wave-protected areas with similar conditions as the original site can have high survival rates. Data on long-term monitoring of coral transplants in diverse environments is central in developing management and mitigation strategies. PMID:28560102

  1. Historical baselines of coral cover on tropical reefs as estimated by expert opinion.

    PubMed

    Eddy, Tyler D; Cheung, William W L; Bruno, John F

    2018-01-01

    Coral reefs are important habitats that represent global marine biodiversity hotspots and provide important benefits to people in many tropical regions. However, coral reefs are becoming increasingly threatened by climate change, overfishing, habitat destruction, and pollution. Historical baselines of coral cover are important to understand how much coral cover has been lost, e.g., to avoid the 'shifting baseline syndrome'. There are few quantitative observations of coral reef cover prior to the industrial revolution, and therefore baselines of coral reef cover are difficult to estimate. Here, we use expert and ocean-user opinion surveys to estimate baselines of global coral reef cover. The overall mean estimated baseline coral cover was 59% (±19% standard deviation), compared to an average of 58% (±18% standard deviation) estimated by professional scientists. We did not find evidence of the shifting baseline syndrome, whereby respondents who first observed coral reefs more recently report lower estimates of baseline coral cover. These estimates of historical coral reef baseline cover are important for scientists, policy makers, and managers to understand the extent to which coral reefs have become depleted and to set appropriate recovery targets.

  2. Reciprocal Symbiont Sharing in the Lodging Mutualism between Walking Corals and Sipunculans.

    PubMed

    Igawa, Momoko; Hata, Hiroki; Kato, Makoto

    2017-01-01

    Solitary scleractinian corals of the genera Heterocyathus and Heteropsammia inhabit soft marine bottoms without attaching to hard substrata. The corallums of these genera contain a coiled cavity inhabited by a sipunculan that roams the seafloor, carrying the host coral with it. The coral serves as a sturdy shelter that protects the sipunculan from possible predators. At the same time, the sipunculan maintains the coral in an upright position on the soft bottom. This coral-sipunculan association is unique because two phylogenetically distant coral genera have developed convergent associations with sipunculans. We investigate the process of convergent evolution of two coral species, Hc. aequicostatus and Hp. cochlea, in Okinawa, Japan, with their symbiotic sipunculans, using phylogenetic and morphological analyses. Phylogenetic analyses clarified that the symbiotic sipunculans comprise two distinct clades, surprisingly both of which are associated with both coral species. The bodily habitus of the sipunculan differed between coral species and fit the morphologies of the coiled cavities of their respective host corals. Our results suggest that the two coral species share two sipunculan clades and that sipunculan morphology is plastic and determined by the internal structure of their host corals.

  3. Phylogenetic diversity of actinobacteria associated with soft coral Alcyonium gracllimum and stony coral Tubastraea coccinea in the East China Sea.

    PubMed

    Yang, Shan; Sun, Wei; Tang, Cen; Jin, Liling; Zhang, Fengli; Li, Zhiyong

    2013-07-01

    Actinobacteria are widely distributed in the marine environment. To date, few studies have been performed to explore the coral-associated Actinobacteria, and little is known about the diversity of coral-associated Actinobacteria. In this study, the actinobacterial diversity associated with one soft coral Alcyonium gracllimum and one stony coral Tubastraea coccinea collected from the East China Sea was investigated using both culture-independent and culture-dependent approaches. A total of 19 actinobacterial genera were detected in these two corals, among which nine genera (Corynebacterium, Dietzia, Gordonia, Kocuria, Microbacterium, Micrococcus, Mycobacterium, Streptomyces, and Candidatus Microthrix) were common, three genera (Cellulomonas, Dermatophilus, and Janibacter) were unique to the soft coral, and seven genera (Brevibacterium, Dermacoccus, Leucobacter, Micromonospora, Nocardioides, Rhodococcus, and Serinicoccus) were unique to the stony coral. This finding suggested that highly diverse Actinobacteria were associated with different types of corals. In particular, five actinobacterial genera (Cellulomonas, Dermacoccus, Gordonia, Serinicoccus, and Candidatus Microthrix) were recovered from corals for the first time, extending the known diversity of coral-associated Actinobacteria. This study shows that soft and stony corals host diverse Actinobacteria and can serve as a new source of marine actinomycetes.

  4. Influence of Eunice norvegica on feeding and calcification in the coral Lophelia pertusa

    NASA Astrophysics Data System (ADS)

    Mueller, C. E.; van Oevelen, D.; Middelburg, J. J.; Lundälv, T.

    2012-04-01

    Lophelia pertusa is the main framework building cold-water coral in the North Atlantic. It forms complex reef structures, extending up to several km in length and several meters in hight. Many species are attracted by the coral frame work, forming a highly diverse community within the reef. Although most work has focused on the corals, the functioning of the system also depends on interactions between corals and associated species. A particular example is the Polychaete Eunice norvegica that lives in close association with the coral host. The Polychaete builds a thin texture-tube between living coral branches and stimulates the coral to calcify the tube. This process strengthens the reef framwork by thickening and connecting coral brances and thereby acts as a positive feedback on the development of large reef structures. This comes however at an metabolic cost for the coral due to the enhanced calcificationrates. Another negative feedback for cold-water coral may be food related, since aquaria observations have shown that Eunice occasionally steels food from its host coral. In this study we investigated the interactions between the coral and polychaete related to calcification and food partitioning for two food types (algae and Artemia). The uptake of 13C and 15N labeled food sources by the worm and the coral was studied in chambers with only corals, only the polychaete and both species present. After 7 days, corals and worms were analyzed for isotope incorporation in bulk tissue and skeleton samples and specific fatty acids (13C) using GC-c-IRMS (gas-chromatography-combustion-isotope ratio mass spectrometry). Corals that were kept in the presence of Eunice indeed showed a higher calcification rates of 7.4 ug C (day* g dw coral)-1, evidencing the stimulation of calcification by Eunice. Interestingly, food uptake of algae and Artemia was higher in the coral-worm treatment for both species as compared to the single species treatments. These results shed new light on trophic and non-trophic interactions in cold-water coral reefs.

  5. In vivo Microscale Measurements of Light and Photosynthesis during Coral Bleaching: Evidence for the Optical Feedback Loop?

    PubMed Central

    Wangpraseurt, Daniel; Holm, Jacob B.; Larkum, Anthony W. D.; Pernice, Mathieu; Ralph, Peter J.; Suggett, David J.; Kühl, Michael

    2017-01-01

    Climate change-related coral bleaching, i.e., the visible loss of zooxanthellae from the coral host, is increasing in frequency and extent and presents a major threat to coral reefs globally. Coral bleaching has been proposed to involve accelerating light stress of their microalgal endosymbionts via a positive feedback loop of photodamage, symbiont expulsion and excess in vivo light exposure. To test this hypothesis, we used light and O2 microsensors to characterize in vivo light exposure and photosynthesis of Symbiodinium during a thermal stress experiment. We created tissue areas with different densities of Symbiodinium cells in order to understand the optical properties and light microenvironment of corals during bleaching. Our results showed that in bleached Pocillopora damicornis corals, Symbiodinium light exposure was up to fivefold enhanced relative to healthy corals, and the relationship between symbiont loss and light enhancement was well-described by a power-law function. Cell-specific rates of Symbiodinium gross photosynthesis and light respiration were enhanced in bleached P. damicornis compared to healthy corals, while areal rates of net photosynthesis decreased. Symbiodinium light exposure in Favites sp. revealed the presence of low light microniches in bleached coral tissues, suggesting that light scattering in thick coral tissues can enable photoprotection of cryptic symbionts. Our study provides evidence for the acceleration of in vivo light exposure during coral bleaching but this optical feedback mechanism differs between coral hosts. Enhanced photosynthesis in relation to accelerating light exposure shows that coral microscale optics exerts a key role on coral photophysiology and the subsequent degree of radiative stress during coral bleaching. PMID:28174567

  6. The effect of changes in sea surface temperature on linear growth of Porites coral in Ambon Bay

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Corvianawatie, Corry, E-mail: corvianawatie@students.itb.ac.id; Putri, Mutiara R., E-mail: mutiara.putri@fitb.itb.ac.id; Cahyarini, Sri Y., E-mail: yuda@geotek.lipi.go.id

    Coral is one of the most important organisms in the coral reef ecosystem. There are several factors affecting coral growth, one of them is changes in sea surface temperature (SST). The purpose of this research is to understand the influence of SST variability on the annual linear growth of Porites coral taken from Ambon Bay. The annual coral linear growth was calculated and compared to the annual SST from the Extended Reconstructed Sea Surface Temperature version 3b (ERSST v3b) model. Coral growth was calculated by using Coral X-radiograph Density System (CoralXDS) software. Coral sample X-radiographs were used as input data.more » Chronology was developed by calculating the coral’s annual growth bands. A pair of high and low density banding patterns observed in the coral’s X-radiograph represent one year of coral growth. The results of this study shows that Porites coral extents from 2001-2009 and had an average growth rate of 1.46 cm/year. Statistical analysis shows that the annual coral linear growth declined by 0.015 cm/year while the annual SST declined by 0.013°C/year. SST and the annual linear growth of Porites coral in the Ambon Bay is insignificantly correlated with r=0.304 (n=9, p>0.05). This indicates that annual SST variability does not significantly influence the linear growth of Porites coral from Ambon Bay. It is suggested that sedimentation load, salinity, pH or other environmental factors may affect annual linear coral growth.« less

  7. Relative Importance of Coral Cover, Habitat Complexity and Diversity in Determining the Structure of Reef Fish Communities

    PubMed Central

    Komyakova, Valeriya; Munday, Philip L.; Jones, Geoffrey P.

    2013-01-01

    The structure of coral reef habitat has a pronounced influence on the diversity, composition and abundance of reef-associated fishes. However, the particular features of the habitat that are most critical are not always known. Coral habitats can vary in many characteristics, notably live coral cover, topographic complexity and coral diversity, but the relative effects of these habitat characteristics are often not distinguished. Here, we investigate the strength of the relationships between these habitat features and local fish diversity, abundance and community structure in the lagoon of Lizard Island, Great Barrier Reef. In a spatial comparison using sixty-six 2m2 quadrats, fish species richness, total abundance and community structure were examined in relation to a wide range of habitat variables, including topographic complexity, habitat diversity, coral diversity, coral species richness, hard coral cover, branching coral cover and the cover of corymbose corals. Fish species richness and total abundance were strongly associated with coral species richness and cover, but only weakly associated with topographic complexity. Regression tree analysis showed that coral species richness accounted for most of the variation in fish species richness (63.6%), while hard coral cover explained more variation in total fish abundance (17.4%), than any other variable. In contrast, topographic complexity accounted for little spatial variation in reef fish assemblages. In degrading coral reef environments, the potential effects of loss of coral cover and topographic complexity are often emphasized, but these findings suggest that reduced coral biodiversity may ultimately have an equal, or greater, impact on reef-associated fish communities. PMID:24349455

  8. Relative importance of coral cover, habitat complexity and diversity in determining the structure of reef fish communities.

    PubMed

    Komyakova, Valeriya; Munday, Philip L; Jones, Geoffrey P

    2013-01-01

    The structure of coral reef habitat has a pronounced influence on the diversity, composition and abundance of reef-associated fishes. However, the particular features of the habitat that are most critical are not always known. Coral habitats can vary in many characteristics, notably live coral cover, topographic complexity and coral diversity, but the relative effects of these habitat characteristics are often not distinguished. Here, we investigate the strength of the relationships between these habitat features and local fish diversity, abundance and community structure in the lagoon of Lizard Island, Great Barrier Reef. In a spatial comparison using sixty-six 2m(2) quadrats, fish species richness, total abundance and community structure were examined in relation to a wide range of habitat variables, including topographic complexity, habitat diversity, coral diversity, coral species richness, hard coral cover, branching coral cover and the cover of corymbose corals. Fish species richness and total abundance were strongly associated with coral species richness and cover, but only weakly associated with topographic complexity. Regression tree analysis showed that coral species richness accounted for most of the variation in fish species richness (63.6%), while hard coral cover explained more variation in total fish abundance (17.4%), than any other variable. In contrast, topographic complexity accounted for little spatial variation in reef fish assemblages. In degrading coral reef environments, the potential effects of loss of coral cover and topographic complexity are often emphasized, but these findings suggest that reduced coral biodiversity may ultimately have an equal, or greater, impact on reef-associated fish communities.

  9. In vivo Microscale Measurements of Light and Photosynthesis during Coral Bleaching: Evidence for the Optical Feedback Loop?

    PubMed

    Wangpraseurt, Daniel; Holm, Jacob B; Larkum, Anthony W D; Pernice, Mathieu; Ralph, Peter J; Suggett, David J; Kühl, Michael

    2017-01-01

    Climate change-related coral bleaching, i.e., the visible loss of zooxanthellae from the coral host, is increasing in frequency and extent and presents a major threat to coral reefs globally. Coral bleaching has been proposed to involve accelerating light stress of their microalgal endosymbionts via a positive feedback loop of photodamage, symbiont expulsion and excess in vivo light exposure. To test this hypothesis, we used light and O 2 microsensors to characterize in vivo light exposure and photosynthesis of Symbiodinium during a thermal stress experiment. We created tissue areas with different densities of Symbiodinium cells in order to understand the optical properties and light microenvironment of corals during bleaching. Our results showed that in bleached Pocillopora damicornis corals, Symbiodinium light exposure was up to fivefold enhanced relative to healthy corals, and the relationship between symbiont loss and light enhancement was well-described by a power-law function. Cell-specific rates of Symbiodinium gross photosynthesis and light respiration were enhanced in bleached P. damicornis compared to healthy corals, while areal rates of net photosynthesis decreased. Symbiodinium light exposure in Favites sp. revealed the presence of low light microniches in bleached coral tissues, suggesting that light scattering in thick coral tissues can enable photoprotection of cryptic symbionts. Our study provides evidence for the acceleration of in vivo light exposure during coral bleaching but this optical feedback mechanism differs between coral hosts. Enhanced photosynthesis in relation to accelerating light exposure shows that coral microscale optics exerts a key role on coral photophysiology and the subsequent degree of radiative stress during coral bleaching.

  10. Arrecifes de Coral: Una Coleccion de Actividades en Espanol para Estudiantes de Escuela Intermedia (Coral Reefs: A Spanish Compilation of Activities for Middle School Students).

    ERIC Educational Resources Information Center

    Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida

    This activity book for middle school students on coral reefs is divided into 10 sections. Section 1 is the introduction. Section 2 describes what coral reefs are while section 3 describes how coral reefs reproduce and grow. Section 4 describes where coral reefs are found, and section 5 describes life on a coral reef. Section 6 describes the…

  11. 77 FR 19230 - Western Pacific Fishery Management Council; Public Meetings

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-03-30

    .... Precious corals fishery and coral reef habitat status. iv. Update on Bio-Sampling Program data summary. v... precious coral fisheries. iv. Coral reef habitat status. v. Update on Bio-Sampling Program and Spearfishing... fisheries. iv. Precious corals fishery and coral reef habitat status. v. Update on Bio-Sampling Program Data...

  12. Local stressors reduce coral resilience to bleaching.

    PubMed

    Carilli, Jessica E; Norris, Richard D; Black, Bryan A; Walsh, Sheila M; McField, Melanie

    2009-07-22

    Coral bleaching, during which corals lose their symbiotic dinoflagellates, typically corresponds with periods of intense heat stress, and appears to be increasing in frequency and geographic extent as the climate warms. A fundamental question in coral reef ecology is whether chronic local stress reduces coral resistance and resilience from episodic stress such as bleaching, or alternatively promotes acclimatization, potentially increasing resistance and resilience. Here we show that following a major bleaching event, Montastraea faveolata coral growth rates at sites with higher local anthropogenic stressors remained suppressed for at least 8 years, while coral growth rates at sites with lower stress recovered in 2-3 years. Instead of promoting acclimatization, our data indicate that background stress reduces coral fitness and resilience to episodic events. We also suggest that reducing chronic stress through local coral reef management efforts may increase coral resilience to global climate change.

  13. Clumped Isotope Composition of Cold-Water Corals: A Role for Vital Effects?

    NASA Astrophysics Data System (ADS)

    Spooner, P.; Guo, W.; Robinson, L. F.

    2014-12-01

    Measurements on a set of cold-water corals (mainly Desmophyllum dianthus) have suggested that their clumped isotope composition could serve as a promising proxy for reconstructing paleocean temperatures. Such measurements have also offered support for certain isotope models of coral calcification. However, there are differences in the clumped isotope compositions between warm-water and cold-water corals, suggesting that different kinds of corals could have differences in their biocalcification processes. In order to understand the systematics of clumped isotope variations in cold-water corals more fully, we present clumped isotope data from a range of cold-water coral species from the tropical Atlantic and the Southern Ocean.Our samples were either collected live or recently dead (14C ages < 1,000 yrs) with associated temperature data. They include a total of 11 solitary corals and 1 colonial coral from the Atlantic, and 8 solitary corals from the Southern Ocean. The data indicate that coral clumped isotope systematics may be more complicated than previously thought. For example, for the genus Caryophyllia we observe significant variations in clumped isotope compositions for corals which grew at the same temperature with an apparent negative correlation between Δ47 and δ18O, different to patterns previously observed in Desmophyllum. These results indicate that existing isotope models of biocalcification may not apply equally well to all corals. Clumped isotope vital effects may be present in certain cold-water corals as they are in warm-water corals, complicating the use of this paleoclimate proxy.

  14. Exposure to elevated sea-surface temperatures below the bleaching threshold impairs coral recovery and regeneration following injury.

    PubMed

    Bonesso, Joshua Louis; Leggat, William; Ainsworth, Tracy Danielle

    2017-01-01

    Elevated sea surface temperatures (SSTs) are linked to an increase in the frequency and severity of bleaching events due to temperatures exceeding corals' upper thermal limits. The temperatures at which a breakdown of the coral- Symbiodinium endosymbiosis (coral bleaching) occurs are referred to as the upper thermal limits for the coral species. This breakdown of the endosymbiosis results in a reduction of corals' nutritional uptake, growth, and tissue integrity. Periods of elevated sea surface temperature, thermal stress and coral bleaching are also linked to increased disease susceptibility and an increased frequency of storms which cause injury and physical damage to corals. Herein we aimed to determine the capacity of corals to regenerate and recover from injuries (removal of apical tips) sustained during periods of elevated sea surface temperatures which result in coral stress responses, but which do not result in coral bleaching (i.e., sub-bleaching thermal stress events). In this study, exposure of the species Acropora aspera to an elevated SST of 32 °C (2 °C below the bleaching threshold, 34 °C) was found to result in reduced fluorescence of green fluorescent protein (GFP), reduced skeletal calcification and a lack of branch regrowth at the site of injury, compared to corals maintained under ambient SST conditions (26 °C). Corals maintained under normal, ambient, sea surface temperatures expressed high GFP fluorescence at the injury site, underwent a rapid regeneration of the coral branch apical tip within 12 days of sustaining injury, and showed extensive regrowth of the coral skeleton. Taken together, our results have demonstrated that periods of sustained increased sea surface temperatures, below the corals' bleaching threshold but above long-term summertime averages, impair coral recovery from damage, regardless of the onset or occurrence of coral bleaching.

  15. Distinct Bacterial Communities Associated with Massive and Branching Scleractinian Corals and Potential Linkages to Coral Susceptibility to Thermal or Cold Stress

    PubMed Central

    Liang, Jiayuan; Yu, Kefu; Wang, Yinghui; Huang, Xueyong; Huang, Wen; Qin, Zhenjun; Pan, Ziliang; Yao, Qiucui; Wang, Wenhuan; Wu, Zhengchao

    2017-01-01

    It is well known that different coral species have different tolerances to thermal or cold stress, which is presumed to be related to the density of Symbiodinium. However, the intrinsic factors between stress-tolerant characteristics and coral-associated bacteria are rarely studied. In this study, 16 massive coral and 9 branching coral colonies from 6 families, 10 genera, and 18 species were collected at the same time and location (Xinyi Reef) in the South China Sea to investigate the bacterial communities. The results of an alpha diversity analysis showed that bacterial diversities associated with massive corals were generally higher than those with branching corals at different taxonomic levels (phylum, class, order, and so on). In addition, hierarchical clustering tree and PCoA analyses showed that coral species were clustered into two large groups according to the similarity of bacterial communities. Group I consisted of massive Goniastrea, Plesiastrea, Leptastrea, Platygyra, Echinopora, Porites, and Leptoria, and group II consisted of branching Acropora and Pocillopora. These findings suggested that both massive corals and branching corals have their own preference for the choice of associated bacteria, which may be involved in observed differences in thermal/cold tolerances. Further analysis found that 55 bacterial phyla, including 43 formally described phyla and 12 candidate phyla, were detected in these coral species. Among them, 52 phyla were recovered from the massive coral group, and 46 phyla were recovered from the branching coral group. Formally described coral pathogens have not been detected in these coral species, suggesting that they are less likely to be threatened by disease in this geographic area. This study highlights a clear relationship between the high complexity of bacterial community associated with coral, skeletal morphology of coral and potentially tolerances to thermal or cold stress. PMID:28642738

  16. Testing New Proxies for Photosymbiosis in the Fossil Record

    NASA Astrophysics Data System (ADS)

    Tornabene, C.; Martindale, R. C.; Schaller, M. F.

    2015-12-01

    Photosymbiosis is a mutualistic relationship that many corals have developed with dinoflagellates called zooxanthellae. The dinoflagellates, of the genus Symbiodinium, photosynthesize and provide corals with most of their energy, while in turn coral hosts live in waters where zooxanthellae have optimal exposure to sunlight. Thanks to this relationship, symbiotic corals calcify faster than non-symbiotic corals. Photosymbiosis is therefore considered the evolutionary innovation that allowed corals to become major reef-builders through geological time.This relationship is extremely difficult to study. Zooxanthellae, which are housed in the coral tissue, are not preserved in fossil coral skeletons, thus determining whether corals had symbionts requires a robust proxy. In order to address this critical question, the goal of this research is to test new proxies for ancient photosymbiosis. Currently the project is focused on assessing the nitrogen (δ15N) isotopes of corals' organic matrices, sensu Muscatine et al. (2005), as well as carbon and oxygen (δ13C, δ18O) isotopes of fossil coral skeletons. Samples from Modern, Pleistocene, Oligocene and Triassic coral skeletons were analyzed to test the validity of these proxies. Coral samples comprise both (interpreted) symbiotic and non-symbiotic fossil corals from the Oligocene and Triassic as well as symbiotic fossil corals from the Modern and Pleistocene to corroborate our findings with the results of Muscatine et al. (2005). Samples were tested for diagenesis through petrographic and scanning electron microscope (SEM) analyses to avoid contamination. Additionally, a novel technique that has not yet been applied to the fossil record was tested. The technique aims to recognize dinosterol, a dinoflagellate biomarker, in both modern and fossil coral samples. The premise of this proxy is that symbiotic corals should contain the dinoflagellate biomarker, whereas those lacking symbionts should lack dinosterol. Results from this research will ideally lead to the development of a definitive, quantitative test for whether fossil corals had symbionts.

  17. Bottlenecks to coral recovery in the Seychelles

    NASA Astrophysics Data System (ADS)

    Chong-Seng, K. M.; Graham, N. A. J.; Pratchett, M. S.

    2014-06-01

    Processes that affect recovery of coral assemblages require investigation because coral reefs are experiencing a diverse array of more frequent disturbances. Potential bottlenecks to coral recovery include limited larval supply, low rates of settlement, and high mortality of new recruits or juvenile corals. We investigated spatial variation in local abundance of scleractinian corals in the Seychelles at three distinct life history stages (recruits, juveniles, and adults) on reefs with differing benthic conditions. Following widespread coral loss due to the 1998 bleaching event, some reefs are recovering (i.e., relatively high scleractinian coral cover: `coral-dominated'), some reefs have low cover of living macrobenthos and unconsolidated rubble substrates (`rubble-dominated'), and some reefs have high cover of macroalgae (`macroalgal-dominated'). Rates of coral recruitment to artificial settlement tiles were similar across all reef conditions, suggesting that larval supply does not explain differential coral recovery across the three reef types. However, acroporid recruits were absent on macroalgal-dominated reefs (0.0 ± 0.0 recruits tile-1) in comparison to coral-dominated reefs (5.2 ± 1.6 recruits tile-1). Juvenile coral colony density was significantly lower on macroalgal-dominated reefs (2.4 ± 1.1 colonies m-2), compared to coral-dominated reefs (16.8 ± 2.4 m-2) and rubble-dominated reefs (33.1 ± 7.3 m-2), suggesting that macroalgal-dominated reefs have either a bottleneck to successful settlement on the natural substrates or a high post-settlement mortality bottleneck. Rubble-dominated reefs had very low cover of adult corals (10.0 ± 1.7 %) compared to coral-dominated reefs (33.4 ± 3.6 %) despite no statistical difference in their juvenile coral densities. A bottleneck caused by low juvenile colony survivorship on unconsolidated rubble-dominated reefs is possible, or alternatively, recruitment to rubble-dominated reefs has only recently begun. This study identified bottlenecks to recovery of coral assemblages that varied depending on post-disturbance habitat condition.

  18. Sugar enrichment provides evidence for a role of nitrogen fixation in coral bleaching.

    PubMed

    Pogoreutz, Claudia; Rädecker, Nils; Cárdenas, Anny; Gärdes, Astrid; Voolstra, Christian R; Wild, Christian

    2017-09-01

    The disruption of the coral-algae symbiosis (coral bleaching) due to rising sea surface temperatures has become an unprecedented global threat to coral reefs. Despite decades of research, our ability to manage mass bleaching events remains hampered by an incomplete mechanistic understanding of the processes involved. In this study, we induced a coral bleaching phenotype in the absence of heat and light stress by adding sugars. The sugar addition resulted in coral symbiotic breakdown accompanied by a fourfold increase of coral-associated microbial nitrogen fixation. Concomitantly, increased N:P ratios by the coral host and algal symbionts suggest excess availability of nitrogen and a disruption of the nitrogen limitation within the coral holobiont. As nitrogen fixation is similarly stimulated in ocean warming scenarios, here we propose a refined coral bleaching model integrating the cascading effects of stimulated microbial nitrogen fixation. This model highlights the putative role of nitrogen-fixing microbes in coral holobiont functioning and breakdown. © 2017 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

  19. Larval connectivity across temperature gradients and its potential effect on heat tolerance in coral populations.

    PubMed

    Kleypas, Joan A; Thompson, Diane M; Castruccio, Frederic S; Curchitser, Enrique N; Pinsky, Malin; Watson, James R

    2016-11-01

    Coral reefs are increasingly exposed to elevated temperatures that can cause coral bleaching and high levels of mortality of corals and associated organisms. The temperature threshold for coral bleaching depends on the acclimation and adaptation of corals to the local maximum temperature regime. However, because of larval dispersal, coral populations can receive larvae from corals that are adapted to very different temperature regimes. We combine an offline particle tracking routine with output from a high-resolution physical oceanographic model to investigate whether connectivity of coral larvae between reefs of different thermal regimes could alter the thermal stress threshold of corals. Our results suggest that larval transport between reefs of widely varying temperatures is likely in the Coral Triangle and that accounting for this connectivity may be important in bleaching predictions. This has important implications in conservation planning, because connectivity may allow some reefs to have an inherited heat tolerance that is higher or lower than predicted based on local conditions alone. © 2016 John Wiley & Sons Ltd.

  20. Microscopic observation of symbiotic and aposymbiotic juvenile corals in nutrient-enriched seawater.

    PubMed

    Tanaka, Yasuaki; Iguchi, Akira; Inoue, Mayuri; Mori, Chiharu; Sakai, Kazuhiko; Suzuki, Atsushi; Kawahata, Hodaka; Nakamura, Takashi

    2013-03-15

    Symbiotic and aposymbiotic juvenile corals, which were grown in the laboratory from the gametes of the scleractinian coral Acropora digitifera and had settled down onto plastic culture plates, were observed with a microscope under different nutrient conditions. The symbiotic corals successfully removed the surrounding benthic microalgae (BMA), whereas the aposymbiotic corals were in close physical contact with BMA. The areal growth rate of the symbiotic corals was significantly higher than that of the aposymbiotic corals. The addition of nutrients to the culture seawater increased the chlorophyll a content in the symbiotic coral polyps and enhanced the growth of some of the symbiotic corals, however the average growth rate was not significantly affected, most likely because of the competition with BMA. The comparison between the symbiotic and aposymbiotic juvenile corals showed that the establishment of a symbiotic association could be imperative for post-settlement juvenile corals to survive in high-nutrient seawater. Copyright © 2012 Elsevier Ltd. All rights reserved.

  1. Bacteria are not the primary cause of bleaching in the Mediterranean coral Oculina patagonica.

    PubMed

    Ainsworth, T D; Fine, M; Roff, G; Hoegh-Guldberg, O

    2008-01-01

    Coral bleaching occurs when the endosymbiosis between corals and their symbionts disintegrates during stress. Mass coral bleaching events have increased over the past 20 years and are directly correlated with periods of warm sea temperatures. However, some hypotheses have suggested that reef-building corals bleach due to infection by bacterial pathogens. The 'Bacterial Bleaching' hypothesis is based on laboratory studies of the Mediterranean invading coral, Oculina patagonica, and has further generated conclusions such as the coral probiotic hypothesis and coral hologenome theory of evolution. We aimed to investigate the natural microbial ecology of O. patagonica during the annual bleaching using fluorescence in situ hybridization to map bacterial populations within the coral tissue layers, and found that the coral bleaches on the temperate rocky reefs of the Israeli coastline without the presence of Vibrio shiloi or bacterial penetration of its tissue layers. Bacterial communities were found associated with the endolithic layer of bleached coral regions, and a community dominance shift from an apparent cyanobacterial-dominated endolithic layer to an algal-dominated layer was found in bleached coral samples. While bacterial communities certainly play important roles in coral stasis and health, we suggest environmental stressors, such as those documented with reef-building corals, are the primary triggers leading to bleaching of O. patagonica and suggest that bacterial involvement in patterns of bleaching is that of opportunistic colonization.

  2. Clues to Coral Reef Health: Integrating Radiative Transfer Modeling and Hyperspectral Data

    NASA Technical Reports Server (NTRS)

    Guild, Liane; Ganapol, Barry; Kramer, Philip; Armstrong, Roy; Gleason, Art; Torres, Juan; Johnson, Lee; Garfield, Toby; Peterson, David L. (Technical Monitor)

    2002-01-01

    An important contribution to coral reef research is to improve spectral distinction between various health states of coral species in areas subject to harmful anthropogenic activity and climate change. New insights into radiative transfer properties of corals under healthy and stressed conditions can advance understandings of ecological processes on reefs and allow better assessments of the impacts of large-scale bleaching and disease events, Our objective was to examine the spectral and spatial properties of hyperspectral sensors that may be used to remotely sense changes in reef community health. We compare in situ reef environment spectra (healthy coral, stressed coral, dead coral, algae, and sand) with airborne hyperspectral data to identify important spectral characteristics and indices. Additionally, spectral measurements over a range of water depths, relief, and bottom types are compared to help quantify bottom-water column influences. In situ spectra were collected in July and August 2002 at the Long Rock site in the Andros Island, Bahamas coastal zone coral reef. Our primary emphasis was on Acropora palmata (or elkhorn coral), a major reef building coral, which is prevalent in the study area, but is suffering from white band disease. A. palmata is currently being, proposed as an endangered species because its populations have severely declined in many areas of the Caribbean. In addition to the A. palmata biotope, we have collected spectra of at least seven other coral biotopes that exist within the study area, each with different coral community composition, density of corals, relief, and size of corals. Coral spectral reflectance was then input into a radiative transfer model, CORALMOD (CM1), which is based on a leaf radiative transfer model. In CM1, input coral reflectance measurements produce modeled reflectance through an inversion at each visible wavelength to provide the absorption spectrum. Initially, we imposed a scattering baseline that is the same regardless of the coral condition and that coral is optically thick and no light is transmitted through coral. Here we will focus on methodology, experimental design, and initial findings of the in situ spectral measurements and preliminary output from the radiative transfer model.

  3. Gene expression of corals in response to macroalgal competitors.

    PubMed

    Shearer, Tonya L; Snell, Terry W; Hay, Mark E

    2014-01-01

    As corals decline and macroalgae proliferate on coral reefs, coral-macroalgal competition becomes more frequent and ecologically important. Whether corals are damaged by these interactions depends on susceptibility of the coral and traits of macroalgal competitors. Investigating changes in gene expression of corals and their intracellular symbiotic algae, Symbiodinium, in response to contact with different macroalgae provides insight into the biological processes and cellular pathways affected by competition with macroalgae. We evaluated the gene expression profiles of coral and Symbiodinium genes from two confamilial corals, Acropora millepora and Montipora digitata, after 6 h and 48 h of contact with four common macroalgae that differ in their allelopathic potency to corals. Contacts with macroalgae affected different biological pathways in the more susceptible (A. millepora) versus the more resistant (M. digitata) coral. Genes of coral hosts and of their associated Symbiodinium also responded in species-specific and time-specific ways to each macroalga. Changes in number and expression intensity of affected genes were greater after 6 h compared to 48 h of contact and were greater following contact with Chlorodesmis fastigiata and Amphiroa crassa than following contact with Galaxaura filamentosa or Turbinaria conoides. We documented a divergence in transcriptional responses between two confamilial corals and their associated Symbiodinium, as well as a diversity of dynamic responses within each coral species with respect to the species of macroalgal competitor and the duration of exposure to that competitor. These responses included early initiation of immune processes by Montipora, which is more resistant to damage after long-term macroalgal contact. Activation of the immune response by corals that better resist algal competition is consistent with the hypothesis that some macroalgal effects on corals may be mediated by microbial pathogens.

  4. Moderate Thermal Stress Causes Active and Immediate Expulsion of Photosynthetically Damaged Zooxanthellae (Symbiodinium) from Corals.

    PubMed

    Fujise, Lisa; Yamashita, Hiroshi; Suzuki, Go; Sasaki, Kengo; Liao, Lawrence M; Koike, Kazuhiko

    2014-01-01

    The foundation of coral reef biology is the symbiosis between corals and zooxanthellae (dinoflagellate genus Symbiodinium). Recently, coral bleaching, which often results in mass mortality of corals and the collapse of coral reef ecosystems, has become an important issue around the world as coral reefs decrease in number year after year. To understand the mechanisms underlying coral bleaching, we maintained two species of scleractinian corals (Acroporidae) in aquaria under non-thermal stress (27°C) and moderate thermal stress conditions (30°C), and we compared the numbers and conditions of the expelled Symbiodinium from these corals. Under non-thermal stress conditions corals actively expel a degraded form of Symbiodinium, which are thought to be digested by their host coral. This response was also observed at 30°C. However, while the expulsion rates of Symbiodinium cells remained constant, the proportion of degraded cells significantly increased at 30°C. This result indicates that corals more actively digest and expel damaged Symbiodinium under thermal stress conditions, likely as a mechanism for coping with environmental change. However, the increase in digested Symbiodinium expulsion under thermal stress may not fully keep up with accumulation of the damaged cells. There are more photosynthetically damaged Symbiodinium upon prolonged exposure to thermal stress, and corals release them without digestion to prevent their accumulation. This response may be an adaptive strategy to moderate stress to ensure survival, but the accumulation of damaged Symbiodinium, which causes subsequent coral deterioration, may occur when the response cannot cope with the magnitude or duration of environmental stress, and this might be a possible mechanism underlying coral bleaching during prolonged moderate thermal stress.

  5. Moderate Thermal Stress Causes Active and Immediate Expulsion of Photosynthetically Damaged Zooxanthellae (Symbiodinium) from Corals

    PubMed Central

    Fujise, Lisa; Yamashita, Hiroshi; Suzuki, Go; Sasaki, Kengo; Liao, Lawrence M.; Koike, Kazuhiko

    2014-01-01

    The foundation of coral reef biology is the symbiosis between corals and zooxanthellae (dinoflagellate genus Symbiodinium). Recently, coral bleaching, which often results in mass mortality of corals and the collapse of coral reef ecosystems, has become an important issue around the world as coral reefs decrease in number year after year. To understand the mechanisms underlying coral bleaching, we maintained two species of scleractinian corals (Acroporidae) in aquaria under non-thermal stress (27°C) and moderate thermal stress conditions (30°C), and we compared the numbers and conditions of the expelled Symbiodinium from these corals. Under non-thermal stress conditions corals actively expel a degraded form of Symbiodinium, which are thought to be digested by their host coral. This response was also observed at 30°C. However, while the expulsion rates of Symbiodinium cells remained constant, the proportion of degraded cells significantly increased at 30°C. This result indicates that corals more actively digest and expel damaged Symbiodinium under thermal stress conditions, likely as a mechanism for coping with environmental change. However, the increase in digested Symbiodinium expulsion under thermal stress may not fully keep up with accumulation of the damaged cells. There are more photosynthetically damaged Symbiodinium upon prolonged exposure to thermal stress, and corals release them without digestion to prevent their accumulation. This response may be an adaptive strategy to moderate stress to ensure survival, but the accumulation of damaged Symbiodinium, which causes subsequent coral deterioration, may occur when the response cannot cope with the magnitude or duration of environmental stress, and this might be a possible mechanism underlying coral bleaching during prolonged moderate thermal stress. PMID:25493938

  6. Relative Pigment Composition and Remote Sensing Reflectance of Caribbean Shallow-Water Corals.

    PubMed

    Torres-Pérez, Juan L; Guild, Liane S; Armstrong, Roy A; Corredor, Jorge; Zuluaga-Montero, Anabella; Polanco, Ramón

    2015-01-01

    Reef corals typically contain a number of pigments, mostly due to their symbiotic relationship with photosynthetic dinoflagellates. These pigments usually vary in presence and concentration and influence the spectral characteristics of corals. We studied the variations in pigment composition among seven Caribbean shallow-water Scleractinian corals by means of High Performance Liquid Chromatography (HPLC) analysis to further resolve the discrimination of corals. We found a total of 27 different pigments among the coral species, including some alteration products of the main pigments. Additionally, pigments typically found in endolithic algae were also identified. A Principal Components Analysis and a Hierarchical Cluster Analysis showed the separation of coral species based on pigment composition. All the corals were collected under the same physical environmental conditions. This suggests that pigment in the coral's symbionts might be more genetically-determined than influenced by prevailing physical conditions of the reef. We further investigated the use of remote sensing reflectance (Rrs) as a tool for estimating the total pigment concentration of reef corals. Depending on the coral species, the Rrs and the total symbiont pigment concentration per coral tissue area correlation showed 79.5-98.5% confidence levels demonstrating its use as a non-invasive robust technique to estimate pigment concentration in studies of coral reef biodiversity and health.

  7. Exploring coral microbiome assemblages in the South China Sea.

    PubMed

    Cai, Lin; Tian, Ren-Mao; Zhou, Guowei; Tong, Haoya; Wong, Yue Him; Zhang, Weipeng; Chui, Apple Pui Yi; Xie, James Y; Qiu, Jian-Wen; Ang, Put O; Liu, Sheng; Huang, Hui; Qian, Pei-Yuan

    2018-02-05

    Coral reefs are significant ecosystems. The ecological success of coral reefs relies on not only coral-algal symbiosis but also coral-microbial partnership. However, microbiome assemblages in the South China Sea corals remain largely unexplored. Here, we compared the microbiome assemblages of reef-building corals Galaxea (G. fascicularis) and Montipora (M. venosa, M. peltiformis, M. monasteriata) collected from five different locations in the South China Sea using massively-parallel sequencing of 16S rRNA gene and multivariate analysis. The results indicated that microbiome assemblages for each coral species were unique regardless of location and were different from the corresponding seawater. Host type appeared to drive the coral microbiome assemblages rather than location and seawater. Network analysis was employed to explore coral microbiome co-occurrence patterns, which revealed 61 and 80 co-occurring microbial species assembling the Galaxea and Montipora microbiomes, respectively. Most of these co-occurring microbial species were commonly found in corals and were inferred to play potential roles in host nutrient metabolism; carbon, nitrogen, sulfur cycles; host detoxification; and climate change. These findings suggest that the co-occurring microbial species explored might be essential to maintain the critical coral-microbial partnership. The present study provides new insights into coral microbiome assemblages in the South China Sea.

  8. Coral lipids and environmental stress.

    PubMed

    Harriott, V J

    1993-04-01

    Environmental monitoring of coral reefs is presently limited by difficulties in recognising coral stress, other than by monitoring coral mortality over time. A recent report described an experiment demonstrating that a measured lipid index declined in shaded corals. The technique described might have application in monitoring coral health, with a decline in coral lipid index as an indicator of coral stress. The application of the technique as a practical monitoring tool was tested for two coral species from the Great Barrier Reef. Consistent with the previous results, lipid index for Pocillopora damicornis initially declined over a period of three weeks in corals maintained in filtered seawater in the dark, indicating possible utilization of lipid stored as energy reserves. However, lipid index subsequently rose to near normal levels. In contrast, lipid index of Acropora formosa increased after four weeks in the dark in filtered seawater. The results showed considerable variability in lipid content between samples from the same colony. Results were also found to be dependent on fixation times and sample weight, introducing potential error into the practical application of the technique. The method as described would be unsuitable for monitoring environmental stress in corals, but the search for a practical method to monitor coral health should continue, given its importance in coral reef management.

  9. Chemically mediated behavior of recruiting corals and fishes: A tipping point that may limit reef recovery

    PubMed Central

    Dixson, Danielle L; Abrego, David; Hay, Mark E

    2015-01-01

    Coral reefs are in global decline, converting from dominance by coral to dominance by seaweed. Once seaweeds become abundant, coral recovery is suppressed unless herbivores return to remove seaweeds, and corals then recruit. Variance in the recovery of fishes and corals is not well understood. We show that juveniles of both corals and fishes are repelled by chemical cues from fished, seaweed-dominated reefs but attracted to cues from coral-dominated areas where fishing is prohibited. Chemical cues of specific seaweeds from degraded reefs repulsed recruits, and cues from specific corals that are typical of healthy reefs attracted recruits. Juveniles were present at but behaviorally avoided recruiting to degraded reefs dominated by seaweeds. For recovery, degraded reefs may need to be managed to produce cues that attract, rather than repel, recruiting corals and fishes. PMID:25146281

  10. In vivo imaging of coral tissue and skeleton with optical coherence tomography

    PubMed Central

    Wentzel, Camilla; Jacques, Steven L.; Wagner, Michael

    2017-01-01

    Application of optical coherence tomography (OCT) for in vivo imaging of tissue and skeleton structure of intact living corals enabled the non-invasive visualization of coral tissue layers (endoderm versus ectoderm), skeletal cavities and special structures such as mesenterial filaments and mucus release from intact living corals. Coral host chromatophores containing green fluorescent protein-like pigment granules appeared hyper-reflective to near-infrared radiation allowing for excellent optical contrast in OCT and a rapid characterization of chromatophore size, distribution and abundance. In vivo tissue plasticity could be quantified by the linear contraction velocity of coral tissues upon illumination resulting in dynamic changes in the live coral tissue surface area, which varied by a factor of 2 between the contracted and expanded state of a coral. Our study provides a novel view on the in vivo organization of coral tissue and skeleton and highlights the importance of microstructural dynamics for coral ecophysiology. PMID:28250104

  11. River discharge reduces reef coral diversity in Palau.

    PubMed

    Golbuu, Yimnang; van Woesik, Robert; Richmond, Robert H; Harrison, Peter; Fabricius, Katharina E

    2011-04-01

    Coral community structure is often governed by a suite of processes that are becoming increasingly influenced by land-use changes and related terrestrial discharges. We studied sites along a watershed gradient to examine both the physical environment and the associated biological communities. Transplanted corals showed no differences in growth rates and mortality along the watershed gradient. However, coral cover, coral richness, and coral colony density increased with increasing distance from the mouth of the bay. There was a negative relationship between coral cover and mean suspended solids concentration. Negative relationships were also found between terrigenous sedimentation rates and the richness of adult and juvenile corals. These results have major implications not only for Pacific islands but for all countries with reef systems downstream of rivers. Land development very often leads to increases in river runoff and suspended solids concentrations that reduce coral cover and coral diversity on adjacent reefs. Copyright © 2010 Elsevier Ltd. All rights reserved.

  12. Reef ecology. Chemically mediated behavior of recruiting corals and fishes: a tipping point that may limit reef recovery.

    PubMed

    Dixson, Danielle L; Abrego, David; Hay, Mark E

    2014-08-22

    Coral reefs are in global decline, converting from dominance by coral to dominance by seaweed. Once seaweeds become abundant, coral recovery is suppressed unless herbivores return to remove seaweeds, and corals then recruit. Variance in the recovery of fishes and corals is not well understood. We show that juveniles of both corals and fishes are repelled by chemical cues from fished, seaweed-dominated reefs but attracted to cues from coral-dominated areas where fishing is prohibited. Chemical cues of specific seaweeds from degraded reefs repulsed recruits, and cues from specific corals that are typical of healthy reefs attracted recruits. Juveniles were present at but behaviorally avoided recruiting to degraded reefs dominated by seaweeds. For recovery, degraded reefs may need to be managed to produce cues that attract, rather than repel, recruiting corals and fishes. Copyright © 2014, American Association for the Advancement of Science.

  13. Doom and boom on a resilient reef: climate change, algal overgrowth and coral recovery.

    PubMed

    Diaz-Pulido, Guillermo; McCook, Laurence J; Dove, Sophie; Berkelmans, Ray; Roff, George; Kline, David I; Weeks, Scarla; Evans, Richard D; Williamson, David H; Hoegh-Guldberg, Ove

    2009-01-01

    Coral reefs around the world are experiencing large-scale degradation, largely due to global climate change, overfishing, diseases and eutrophication. Climate change models suggest increasing frequency and severity of warming-induced coral bleaching events, with consequent increases in coral mortality and algal overgrowth. Critically, the recovery of damaged reefs will depend on the reversibility of seaweed blooms, generally considered to depend on grazing of the seaweed, and replenishment of corals by larvae that successfully recruit to damaged reefs. These processes usually take years to decades to bring a reef back to coral dominance. In 2006, mass bleaching of corals on inshore reefs of the Great Barrier Reef caused high coral mortality. Here we show that this coral mortality was followed by an unprecedented bloom of a single species of unpalatable seaweed (Lobophora variegata), colonizing dead coral skeletons, but that corals on these reefs recovered dramatically, in less than a year. Unexpectedly, this rapid reversal did not involve reestablishment of corals by recruitment of coral larvae, as often assumed, but depended on several ecological mechanisms previously underestimated. These mechanisms of ecological recovery included rapid regeneration rates of remnant coral tissue, very high competitive ability of the corals allowing them to out-compete the seaweed, a natural seasonal decline in the particular species of dominant seaweed, and an effective marine protected area system. Our study provides a key example of the doom and boom of a highly resilient reef, and new insights into the variability and mechanisms of reef resilience under rapid climate change.

  14. Disturbance and the dynamics of coral cover on the Great Barrier Reef (1995-2009).

    PubMed

    Osborne, Kate; Dolman, Andrew M; Burgess, Scott C; Johns, Kerryn A

    2011-03-10

    Coral reef ecosystems worldwide are under pressure from chronic and acute stressors that threaten their continued existence. Most obvious among changes to reefs is loss of hard coral cover, but a precise multi-scale estimate of coral cover dynamics for the Great Barrier Reef (GBR) is currently lacking. Monitoring data collected annually from fixed sites at 47 reefs across 1300 km of the GBR indicate that overall regional coral cover was stable (averaging 29% and ranging from 23% to 33% cover across years) with no net decline between 1995 and 2009. Subregional trends (10-100 km) in hard coral were diverse with some being very dynamic and others changing little. Coral cover increased in six subregions and decreased in seven subregions. Persistent decline of corals occurred in one subregion for hard coral and Acroporidae and in four subregions in non-Acroporidae families. Change in Acroporidae accounted for 68% of change in hard coral. Crown-of-thorns starfish (Acanthaster planci) outbreaks and storm damage were responsible for more coral loss during this period than either bleaching or disease despite two mass bleaching events and an increase in the incidence of coral disease. While the limited data for the GBR prior to the 1980's suggests that coral cover was higher than in our survey, we found no evidence of consistent, system-wide decline in coral cover since 1995. Instead, fluctuations in coral cover at subregional scales (10-100 km), driven mostly by changes in fast-growing Acroporidae, occurred as a result of localized disturbance events and subsequent recovery.

  15. Persistence and Change in Community Composition of Reef Corals through Present, Past, and Future Climates

    PubMed Central

    Edmunds, Peter J.; Adjeroud, Mehdi; Baskett, Marissa L.; Baums, Iliana B.; Budd, Ann F.; Carpenter, Robert C.; Fabina, Nicholas S.; Fan, Tung-Yung; Franklin, Erik C.; Gross, Kevin; Han, Xueying; Jacobson, Lianne; Klaus, James S.; McClanahan, Tim R.; O'Leary, Jennifer K.; van Oppen, Madeleine J. H.; Pochon, Xavier; Putnam, Hollie M.; Smith, Tyler B.; Stat, Michael; Sweatman, Hugh; van Woesik, Robert; Gates, Ruth D.

    2014-01-01

    The reduction in coral cover on many contemporary tropical reefs suggests a different set of coral community assemblages will dominate future reefs. To evaluate the capacity of reef corals to persist over various time scales, we examined coral community dynamics in contemporary, fossil, and simulated future coral reef ecosystems. Based on studies between 1987 and 2012 at two locations in the Caribbean, and between 1981 and 2013 at five locations in the Indo-Pacific, we show that many coral genera declined in abundance, some showed no change in abundance, and a few coral genera increased in abundance. Whether the abundance of a genus declined, increased, or was conserved, was independent of coral family. An analysis of fossil-reef communities in the Caribbean revealed changes in numerical dominance and relative abundances of coral genera, and demonstrated that neither dominance nor taxon was associated with persistence. As coral family was a poor predictor of performance on contemporary reefs, a trait-based, dynamic, multi-patch model was developed to explore the phenotypic basis of ecological performance in a warmer future. Sensitivity analyses revealed that upon exposure to thermal stress, thermal tolerance, growth rate, and longevity were the most important predictors of coral persistence. Together, our results underscore the high variation in the rates and direction of change in coral abundances on contemporary and fossil reefs. Given this variation, it remains possible that coral reefs will be populated by a subset of the present coral fauna in a future that is warmer than the recent past. PMID:25272143

  16. Phylogenetically diverse denitrifying and ammonia-oxidizing bacteria in corals Alcyonium gracillimum and Tubastraea coccinea.

    PubMed

    Yang, Shan; Sun, Wei; Zhang, Fengli; Li, Zhiyong

    2013-10-01

    To date, the association of coral-bacteria and the ecological roles of bacterial symbionts in corals remain largely unknown. In particular, little is known about the community components of bacterial symbionts of corals involved in the process of denitrification and ammonia oxidation. In this study, the nitrite reductase (nirS and nirK) and ammonia monooxygenase subunit A (amoA) genes were used as functional markers. Diverse bacteria with the potential to be active as denitrifiers and ammonia-oxidizing bacteria (AOB) were found in two East China Sea corals: stony coral Alcyonium gracillimum and soft coral Tubastraea coccinea. The 16S rRNA gene library analysis demonstrated different communities of bacterial symbionts in these two corals of the same location. Nitrite reductase nirK gene was found only in T. coccinea, while both nirK and nirS genes were detected in A. gracillimum, which might be the result of the presence of different bacterial symbionts in these two corals. AOB rather than ammonia-oxidizing archaea were detected in both corals, suggesting that AOB might play an important role in the ammonia oxidation process of the corals. This study indicates that the coral bacterial symbionts with the potential for nitrite reduction and ammonia oxidation might have multiple ecological roles in the coral holobiont, which promotes our understanding of bacteria-mediated nitrogen cycling in corals. To our knowledge, this study is the first assessment of the community structure and phylogenetic diversity of denitrifying bacteria and AOB in corals based on nirK, nirS, and amoA gene library analysis.

  17. Habitat Selectivity and Reliance on Live Corals for Indo-Pacific Hawkfishes (Family: Cirrhitidae).

    PubMed

    Coker, Darren J; Hoey, Andrew S; Wilson, Shaun K; Depczynski, Martial; Graham, Nicholas A J; Hobbs, Jean-Paul A; Holmes, Thomas H; Pratchett, Morgan S

    2015-01-01

    Hawkfishes (family: Cirrhitidae) are small conspicuous reef predators that commonly perch on, or shelter within, the branches of coral colonies. This study examined habitat associations of hawkfishes, and explicitly tested whether hawkfishes associate with specific types of live coral. Live coral use and habitat selectivity of hawkfishes was explored at six locations from Chagos in the central Indian Ocean extending east to Fiji in the Pacific Ocean. A total of 529 hawkfishes from seven species were recorded across all locations with 63% of individuals observed perching on, or sheltering within, live coral colonies. Five species (all except Cirrhitus pinnulatus and Cirrhitichthys oxycephalus) associated with live coral habitats. Cirrhitichthys falco selected for species of Pocillopora while Paracirrhites arcatus and P. forsteri selected for both Pocillopora and Acropora, revealing that these habitats are used disproportionately more than expected based on the local cover of these coral genera. Habitat selection was consistent across geographic locations, and species of Pocillopora were the most frequently used and most consistently selected even though this coral genus never comprised more than 6% of the total coral cover at any of the locations. Across locations, Paracirrhites arcatus and P. forsteri were the most abundant species and variation in their abundance corresponded with local patterns of live coral cover and abundance of Pocilloporid corals, respectively. These findings demonstrate the link between small predatory fishes and live coral habitats adding to the growing body of literature highlighting that live corals (especially erect branching corals) are critically important for sustaining high abundance and diversity of fishes on coral reefs.

  18. Antibacterial Activity of Hawaiian Corals: Possible Protection from Disease?

    NASA Astrophysics Data System (ADS)

    Gochfeld, D. J.; Aeby, G. S.; Miller, J. D.

    2006-12-01

    Reports of coral diseases in the Caribbean have appeared with increasing frequency over the past two decades; however, records of coral diseases in the Pacific have lagged far behind. Recent surveys of coral disease in the Hawaiian Islands indicate relatively low, but consistent, levels of disease throughout the inhabited Main and uninhabited Northwestern Hawaiian Islands, and demonstrate variation in levels of disease among the major genera of Hawaiian corals. Although little is known about immune defense to disease in corals, one potential mechanism of defense is the production of antimicrobial compounds that protect corals from pathogens. A preliminary survey of antibacterial chemical defenses among three dominant species of Hawaiian corals was undertaken. Crude aqueous extracts of Porites lobata, Pocillopora meandrina and Montipora capitata were tested against nine strains of bacteria in a growth inhibition assay. Inhibitory extracts were further tested to determine whether their effects were cytostatic or cytotoxic. The bacteria selected included known coral pathogens, potential marine pathogens found in human waste and strains previously identified from the surfaces of Hawaiian corals. Extracts from all three species of coral exhibited a high degree of antibacterial activity, but also a high degree of selectivity against different bacterial strains. In addition, some extracts were stimulatory to some bacteria. In addition to interspecific variability, extracts also exhibited intraspecific variability, both within and between sites. Hawaiian corals have significant antibacterial activity, which may explain the relatively low prevalence of disease in these corals; however, further characterization of pathogens specifically responsible for disease in Hawaiian corals is necessary before we can conclude that antibacterial activity protects Hawaiian corals from disease.

  19. 76 FR 66021 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Generic Annual Catch Limits...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-25

    ..., Shrimp, and Coral and Coral Reefs Fishery Management Plans for the Gulf of Mexico (FMPs) as prepared and... fisheries for reef fish, red drum, shrimp, and coral and coral reefs of the Gulf of Mexico (Gulf) are... remove octocorals from the Coral and Coral Reefs FMP. Most octocorals are harvested in waters under the...

  20. 76 FR 66273 - Snapper-Grouper Fishery Off the Southern Atlantic States and Coral and Coral Reefs Fishery in the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-26

    ...-Grouper Fishery Off the Southern Atlantic States and Coral and Coral Reefs Fishery in the South Atlantic... the South Atlantic Region and the FMP for Coral, Coral Reefs, and Live/Hard Bottom Habitats of the... Aquariums to collect, with certain conditions, various species of reef fish and live rock in Federal waters...

  1. Coral Reefs: An English Compilation of Activities for Middle School Students.

    ERIC Educational Resources Information Center

    Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida

    This activity book on coral reefs for middle school students is divided into 10 sections. Section 1 contains the introduction. Section 2 describes what coral reefs are while section 3 describes how coral reefs reproduce and grow. Section 4 discusses where coral reefs are found and section 5 describes life on a coral reef. Section 6 discusses the…

  2. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Scott, R.W.; Fernandez-Mendiola, P.A.; Gili, E.

    During the Early Cretaceous, coral-algal communities occupied deeper water habitats in the reef ecosystem, and rudist communities generally populated the shallow-water, carbonate-sand substrates. During the middle Cretaceous, however, coral-algal communities became less common, and Late Cretaceous reef communities consisted of both rudist-dominated and rudist-coral communities. In the Pyrenean basins and other basins in the Mediterranean, coral associations co-existed with rudists forming complex buildups at the shelf-edge. In some parts of these buildups corals were nearly as abundant as rudists; in some complex buildups large coral colonies encrusted the rudists. Behind the shelf margin cylindrical, elevator rudists dominated the lenticular thicketsmore » that were interspersed with carbonate sands. Global changes in oceanic conditions, such as marine productivity and oxygen content, may have stressed the deeper coral-algal reef communities leaving rudists as the major shallow reef biota in Caribbean reefs. However, the co-occurrence of corals with rudists in these Pyrenean complex buildups suggests that corals were able to compete with rudists for resources. The corals in the complex buildups generally belong to genera different from those in the coral-algal communities. Perhaps this ecological stress in the mid-Cretaceous resulted in the evolution of new coral taxa.« less

  3. Excess algal symbionts increase the susceptibility of reef corals to bleaching

    NASA Astrophysics Data System (ADS)

    Cunning, Ross; Baker, Andrew C.

    2013-03-01

    Rising ocean temperatures associated with global climate change are causing mass coral bleaching and mortality worldwide. Understanding the genetic and environmental factors that mitigate coral bleaching susceptibility may aid local management efforts to help coral reefs survive climate change. Although bleaching susceptibility depends partly on the genetic identity of a coral's algal symbionts, the effect of symbiont density, and the factors controlling it, remain poorly understood. By applying a new metric of symbiont density to study the coral Pocillopora damicornis during seasonal warming and acute bleaching, we show that symbiont cell ratio density is a function of both symbiont type and environmental conditions, and that corals with high densities are more susceptible to bleaching. Higher vulnerability of corals with more symbionts establishes a quantitative mechanistic link between symbiont density and the molecular basis for coral bleaching, and indicates that high densities do not buffer corals from thermal stress, as has been previously suggested. These results indicate that environmental conditions that increase symbiont densities, such as nutrient pollution, will exacerbate climate-change-induced coral bleaching, providing a mechanistic explanation for why local management to reduce these stressors will help coral reefs survive future warming.

  4. Anti-Pathogenic Activity of Coral Bacteria Againts White Plaque Disease of Coral Dipsastraea from Tengah Island, Karimunjawa

    NASA Astrophysics Data System (ADS)

    Imam Muchlissin, Sakti; Sabdono, Agus; Permata W, Diah

    2018-02-01

    Coral disease is main factor of degrading coral reefs, such as White Plaque (WP) disease that cause loss of epidermal tissue of corals. The purposes of this research were to identify the bacteria associated with White Plaque Disease of coral Dipsastraea and to investigate coral bacteria that have antipathogenic potency against White Plaque Disease by Coral Dipsastraea. Sampling was carried out by purposive method in Tengah Island, Karimunjawa on March 2015. Streak method was used to isolate and purify coral bacteria, while overlay and agar diffusion method were used to test antibacterial activity. Identification of selected bacteria was conducted by biochemical and molecular methods. Polyphasic identification of bacteria associated with diseased coral White Plague of Dipsastraea. It is found that TFWP1, TFWP2, TFWP3 and TFWP4 were closely related to Bacillus antracis, Virgibacillus olivae, Virgibacillus salarius and Bacillus mojavensis, respectively. While antipathogen activity bacterial isolates, NM1.3, NM1.8 and NM2.3 were closely related to Pseudoalteromonas flavipulchra, Pseudoalteromonas piscicida, and Vibrio azureus, respectively. Phylogenetic data on microbial community composition in coral will help with the knowledge in the biological control of coral diseases.

  5. Shifting paradigms in restoration of the world's coral reefs.

    PubMed

    van Oppen, Madeleine J H; Gates, Ruth D; Blackall, Linda L; Cantin, Neal; Chakravarti, Leela J; Chan, Wing Y; Cormick, Craig; Crean, Angela; Damjanovic, Katarina; Epstein, Hannah; Harrison, Peter L; Jones, Thomas A; Miller, Margaret; Pears, Rachel J; Peplow, Lesa M; Raftos, David A; Schaffelke, Britta; Stewart, Kristen; Torda, Gergely; Wachenfeld, David; Weeks, Andrew R; Putnam, Hollie M

    2017-09-01

    Many ecosystems around the world are rapidly deteriorating due to both local and global pressures, and perhaps none so precipitously as coral reefs. Management of coral reefs through maintenance (e.g., marine-protected areas, catchment management to improve water quality), restoration, as well as global and national governmental agreements to reduce greenhouse gas emissions (e.g., the 2015 Paris Agreement) is critical for the persistence of coral reefs. Despite these initiatives, the health and abundance of corals reefs are rapidly declining and other solutions will soon be required. We have recently discussed options for using assisted evolution (i.e., selective breeding, assisted gene flow, conditioning or epigenetic programming, and the manipulation of the coral microbiome) as a means to enhance environmental stress tolerance of corals and the success of coral reef restoration efforts. The 2014-2016 global coral bleaching event has sharpened the focus on such interventionist approaches. We highlight the necessity for consideration of alternative (e.g., hybrid) ecosystem states, discuss traits of resilient corals and coral reef ecosystems, and propose a decision tree for incorporating assisted evolution into restoration initiatives to enhance climate resilience of coral reefs. © 2017 John Wiley & Sons Ltd.

  6. Geographical variations in bacterial communities associated with soft coral Scleronephthya gracillimum.

    PubMed

    Woo, Seonock; Yang, Shan-Hua; Chen, Hsing-Ju; Tseng, Yu-Fang; Hwang, Sung-Jin; De Palmas, Stephane; Denis, Vianney; Imahara, Yukimitsu; Iwase, Fumihito; Yum, Seungshic; Tang, Sen-Lin

    2017-01-01

    Environmental impacts can alter relationships between a coral and its symbiotic microbial community. Furthermore, changes in the microbial community associated with increased seawater temperatures can cause opportunistic infections, coral disease and death. Interactions between soft corals and their associated microbes are not well understood. The species Scleronephthya gracillimum is distributed in tropical to temperate zones in coral assemblages along the Kuroshio Current region. In this study we collected S. gracillimum from various sites at different latitudes, and compared composition of their bacterial communities using Next Generation Sequencing. Coral samples from six geographically distinct areas (two sites each in Taiwan, Japan, and Korea) had considerable variation in their associated bacterial communities and diversity. Endozoicimonaceae was the dominant group in corals from Korea and Japan, whereas Mycoplasma was dominant in corals from Taiwan corals. Interestingly, the latter corals had lower relative abundance of Endozoicimonaceae, but greater diversity. These biogeographic differences in bacterial composition may have been due to varying environmental conditions among study locations, or because of host responses to prevailing environmental conditions. This study provided a baseline for future studies of soft coral microbiomes, and assessment of functions of host metabolites and soft coral holobionts.

  7. Geographical variations in bacterial communities associated with soft coral Scleronephthya gracillimum

    PubMed Central

    Chen, Hsing-Ju; Tseng, Yu-Fang; Hwang, Sung-Jin; De Palmas, Stephane; Denis, Vianney; Imahara, Yukimitsu; Iwase, Fumihito; Yum, Seungshic; Tang, Sen-Lin

    2017-01-01

    Environmental impacts can alter relationships between a coral and its symbiotic microbial community. Furthermore, changes in the microbial community associated with increased seawater temperatures can cause opportunistic infections, coral disease and death. Interactions between soft corals and their associated microbes are not well understood. The species Scleronephthya gracillimum is distributed in tropical to temperate zones in coral assemblages along the Kuroshio Current region. In this study we collected S. gracillimum from various sites at different latitudes, and compared composition of their bacterial communities using Next Generation Sequencing. Coral samples from six geographically distinct areas (two sites each in Taiwan, Japan, and Korea) had considerable variation in their associated bacterial communities and diversity. Endozoicimonaceae was the dominant group in corals from Korea and Japan, whereas Mycoplasma was dominant in corals from Taiwan corals. Interestingly, the latter corals had lower relative abundance of Endozoicimonaceae, but greater diversity. These biogeographic differences in bacterial composition may have been due to varying environmental conditions among study locations, or because of host responses to prevailing environmental conditions. This study provided a baseline for future studies of soft coral microbiomes, and assessment of functions of host metabolites and soft coral holobionts. PMID:28859111

  8. Coral bleaching--capacity for acclimatization and adaptation.

    PubMed

    Coles, S L; Brown, Barbara E

    2003-01-01

    Coral bleaching, i.e., loss of most of the symbiotic zooxanthellae normally found within coral tissue, has occurred with increasing frequency on coral reefs throughout the world in the last 20 years, mostly during periods of El Nino Southern Oscillation (ENSO). Experiments and observations indicate that coral bleaching results primarily from elevated seawater temperatures under high light conditions, which increases rates of biochemical reactions associated with zooxanthellar photosynthesis, producing toxic forms of oxygen that interfere with cellular processes. Published projections of a baseline of increasing ocean temperature resulting from global warming have suggested that annual temperature maxima within 30 years may be at levels that will cause frequent coral bleaching and widespread mortality leading to decline of corals as dominant organisms on reefs. However, these projections have not considered the high variability in bleaching response that occurs among corals both within and among species. There is information that corals and their symbionts may be capable of acclimatization and selective adaptation to elevated temperatures that have already resulted in bleaching resistant coral populations, both locally and regionally, in various areas of the world. There are possible mechanisms that might provide resistance and protection to increased temperature and light. These include inducible heat shock proteins that act in refolding denatured cellular and structural proteins, production of oxidative enzymes that inactivate harmful oxygen radicals, fluorescent coral pigments that both reflect and dissipate light energy, and phenotypic adaptations of zooxanthellae and adaptive shifts in their populations at higher temperatures. Such mechanisms, when considered in conjunction with experimental and observational evidence for coral recovery in areas that have undergone coral bleaching, suggest an as yet undefined capacity in corals and zooxanthellae to adapt to conditions that have induced coral bleaching. Clearly, there are limits to acclimatory processes that can counter coral bleaching resulting from elevated sea temperatures, but scientific models will not accurately predict the fate of reef corals until we have a better understanding of coral-algal acclimatization/adaptation potential. Research is particularly needed with respect to the molecular and physiological mechanisms that promote thermal tolerance in corals and zooxanthellae and identification of genetic characteristics responsible for the variety of responses that occur in a coral bleaching event. Only then will we have some idea of the nature of likely responses, the timescales involved and the role of 'experience' in modifying bleaching impact.

  9. High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages.

    PubMed

    Hoey, Andrew S; Pratchett, Morgan S; Cvitanovic, Christopher

    2011-01-01

    Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32'S, 159°04'E), the worlds' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4%) and fleshy macroalgae (20.9%). Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m(-2)), however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha(-1)), and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances.

  10. Short-Term Coral Bleaching Is Not Recorded by Skeletal Boron Isotopes

    PubMed Central

    Schoepf, Verena; McCulloch, Malcolm T.; Warner, Mark E.; Levas, Stephen J.; Matsui, Yohei; Aschaffenburg, Matthew D.; Grottoli, Andréa G.

    2014-01-01

    Coral skeletal boron isotopes have been established as a proxy for seawater pH, yet it remains unclear if and how this proxy is affected by seawater temperature. Specifically, it has never been directly tested whether coral bleaching caused by high water temperatures influences coral boron isotopes. Here we report the results from a controlled bleaching experiment conducted on the Caribbean corals Porites divaricata, Porites astreoides, and Orbicella faveolata. Stable boron (δ11B), carbon (δ13C), oxygen (δ18O) isotopes, Sr/Ca, Mg/Ca, U/Ca, and Ba/Ca ratios, as well as chlorophyll a concentrations and calcification rates were measured on coral skeletal material corresponding to the period during and immediately after the elevated temperature treatment and again after 6 weeks of recovery on the reef. We show that under these conditions, coral bleaching did not affect the boron isotopic signature in any coral species tested, despite significant changes in coral physiology. This contradicts published findings from coral cores, where significant decreases in boron isotopes were interpreted as corresponding to times of known mass bleaching events. In contrast, δ13C and δ18O exhibited major enrichment corresponding to decreases in calcification rates associated with bleaching. Sr/Ca of bleached corals did not consistently record the 1.2°C difference in seawater temperature during the bleaching treatment, or alternatively show a consistent increase due to impaired photosynthesis and calcification. Mg/Ca, U/Ca, and Ba/Ca were affected by coral bleaching in some of the coral species, but the observed patterns could not be satisfactorily explained by temperature dependence or changes in coral physiology. This demonstrates that coral boron isotopes do not record short-term bleaching events, and therefore cannot be used as a proxy for past bleaching events. The robustness of coral boron isotopes to changes in coral physiology, however, suggests that reconstruction of seawater pH using boron isotopes should be uncompromised by short-term bleaching events. PMID:25396422

  11. Short-term coral bleaching is not recorded by skeletal boron isotopes.

    PubMed

    Schoepf, Verena; McCulloch, Malcolm T; Warner, Mark E; Levas, Stephen J; Matsui, Yohei; Aschaffenburg, Matthew D; Grottoli, Andréa G

    2014-01-01

    Coral skeletal boron isotopes have been established as a proxy for seawater pH, yet it remains unclear if and how this proxy is affected by seawater temperature. Specifically, it has never been directly tested whether coral bleaching caused by high water temperatures influences coral boron isotopes. Here we report the results from a controlled bleaching experiment conducted on the Caribbean corals Porites divaricata, Porites astreoides, and Orbicella faveolata. Stable boron (δ11B), carbon (δ13C), oxygen (δ18O) isotopes, Sr/Ca, Mg/Ca, U/Ca, and Ba/Ca ratios, as well as chlorophyll a concentrations and calcification rates were measured on coral skeletal material corresponding to the period during and immediately after the elevated temperature treatment and again after 6 weeks of recovery on the reef. We show that under these conditions, coral bleaching did not affect the boron isotopic signature in any coral species tested, despite significant changes in coral physiology. This contradicts published findings from coral cores, where significant decreases in boron isotopes were interpreted as corresponding to times of known mass bleaching events. In contrast, δ13C and δ18O exhibited major enrichment corresponding to decreases in calcification rates associated with bleaching. Sr/Ca of bleached corals did not consistently record the 1.2°C difference in seawater temperature during the bleaching treatment, or alternatively show a consistent increase due to impaired photosynthesis and calcification. Mg/Ca, U/Ca, and Ba/Ca were affected by coral bleaching in some of the coral species, but the observed patterns could not be satisfactorily explained by temperature dependence or changes in coral physiology. This demonstrates that coral boron isotopes do not record short-term bleaching events, and therefore cannot be used as a proxy for past bleaching events. The robustness of coral boron isotopes to changes in coral physiology, however, suggests that reconstruction of seawater pH using boron isotopes should be uncompromised by short-term bleaching events.

  12. Regional hard coral distribution within geomorphic and reef flat ecological zones determined by satellite imagery of the Xisha Islands, South China Sea

    NASA Astrophysics Data System (ADS)

    Zuo, Xiuling; Su, Fenzhen; Zhao, Huanting; Zhang, Junjue; Wang, Qi; Wu, Di

    2017-05-01

    Coral reefs in the Xisha Islands (also known as the Paracel Islands in English), South China Sea, have experienced dramatic declines in coral cover. However, the current regional scale hard coral distribution of geomorphic and ecological zones, essential for reefs management in the context of global warming and ocean acidification, is not well documented. We analyzed data from field surveys, Landsat-8 and GF-1 images to map the distribution of hard coral within geomorphic zones and reef flat ecological zones. In situ surveys conducted in June 2014 on nine reefs provided a complete picture of reef status with regard to live coral diversity, evenness of coral cover and reef health (live versus dead cover) for the Xisha Islands. Mean coral cover was 12.5% in 2014 and damaged reefs seemed to show signs of recovery. Coral cover in sheltered habitats such as lagoon patch reefs and biotic dense zones of reef flats was higher, but there were large regional differences and low diversity. In contrast, the more exposed reef slopes had high coral diversity, along with high and more equal distributions of coral cover. Mean hard coral cover of other zones was <10%. The total Xisha reef system was estimated to cover 1 060 km2, and the emergent reefs covered 787 m2. Hard corals of emergent reefs were considered to cover 97 km2. The biotic dense zone of the reef flat was a very common zone on all simple atolls, especially the broader northern reef flats. The total cover of live and dead coral can reach above 70% in this zone, showing an equilibrium between live and dead coral as opposed to coral and algae. This information regarding the spatial distribution of hard coral can support and inform the management of Xisha reef ecosystems.

  13. Linking Demographic Processes of Juvenile Corals to Benthic Recovery Trajectories in Two Common Reef Habitats

    PubMed Central

    Doropoulos, Christopher; Ward, Selina; Roff, George; González-Rivero, Manuel; Mumby, Peter J.

    2015-01-01

    Tropical reefs are dynamic ecosystems that host diverse coral assemblages with different life-history strategies. Here, we quantified how juvenile (<50 mm) coral demographics influenced benthic coral structure in reef flat and reef slope habitats on the southern Great Barrier Reef, Australia. Permanent plots and settlement tiles were monitored every six months for three years in each habitat. These environments exhibited profound differences: the reef slope was characterised by 95% less macroalgal cover, and twice the amount of available settlement substrata and rates of coral settlement than the reef flat. Consequently, post-settlement coral survival in the reef slope was substantially higher than that of the reef flat, and resulted in a rapid increase in coral cover from 7 to 31% in 2.5 years. In contrast, coral cover on the reef flat remained low (~10%), whereas macroalgal cover increased from 23 to 45%. A positive stock-recruitment relationship was found in brooding corals in both habitats; however, brooding corals were not directly responsible for the observed changes in coral cover. Rather, the rapid increase on the reef slope resulted from high abundances of broadcast spawning Acropora recruits. Incorporating our results into transition matrix models demonstrated that most corals escape mortality once they exceed 50 mm, but for smaller corals mortality in brooders was double those of spawners (i.e. acroporids and massive corals). For corals on the reef flat, sensitivity analysis demonstrated that growth and mortality of larger juveniles (21–50 mm) highly influenced population dynamics; whereas the recruitment, growth and mortality of smaller corals (<20 mm) had the highest influence on reef slope population dynamics. Our results provide insight into the population dynamics and recovery trajectories in disparate reef habitats, and highlight the importance of acroporid recruitment in driving rapid increases in coral cover following large-scale perturbation in reef slope environments. PMID:26009892

  14. Linking demographic processes of juvenile corals to benthic recovery trajectories in two common reef habitats.

    PubMed

    Doropoulos, Christopher; Ward, Selina; Roff, George; González-Rivero, Manuel; Mumby, Peter J

    2015-01-01

    Tropical reefs are dynamic ecosystems that host diverse coral assemblages with different life-history strategies. Here, we quantified how juvenile (<50 mm) coral demographics influenced benthic coral structure in reef flat and reef slope habitats on the southern Great Barrier Reef, Australia. Permanent plots and settlement tiles were monitored every six months for three years in each habitat. These environments exhibited profound differences: the reef slope was characterised by 95% less macroalgal cover, and twice the amount of available settlement substrata and rates of coral settlement than the reef flat. Consequently, post-settlement coral survival in the reef slope was substantially higher than that of the reef flat, and resulted in a rapid increase in coral cover from 7 to 31% in 2.5 years. In contrast, coral cover on the reef flat remained low (~10%), whereas macroalgal cover increased from 23 to 45%. A positive stock-recruitment relationship was found in brooding corals in both habitats; however, brooding corals were not directly responsible for the observed changes in coral cover. Rather, the rapid increase on the reef slope resulted from high abundances of broadcast spawning Acropora recruits. Incorporating our results into transition matrix models demonstrated that most corals escape mortality once they exceed 50 mm, but for smaller corals mortality in brooders was double those of spawners (i.e. acroporids and massive corals). For corals on the reef flat, sensitivity analysis demonstrated that growth and mortality of larger juveniles (21-50 mm) highly influenced population dynamics; whereas the recruitment, growth and mortality of smaller corals (<20 mm) had the highest influence on reef slope population dynamics. Our results provide insight into the population dynamics and recovery trajectories in disparate reef habitats, and highlight the importance of acroporid recruitment in driving rapid increases in coral cover following large-scale perturbation in reef slope environments.

  15. Food availability promotes rapid recovery from thermal stress in a scleractinian coral

    NASA Astrophysics Data System (ADS)

    Connolly, S. R.; Lopez-Yglesias, M. A.; Anthony, K. R. N.

    2012-12-01

    Bleaching in corals due to environmental stress represents a loss of energy intake often leading to an increase in mortality risk. Successful coral recovery from severe bleaching events may depend on the rate of replenishment of algal symbiont populations following the period of thermal stress, the supply of an alternative food source, or both. Here, we explore the role of food availability in promoting the survival and recovery of a common coral ( Acropora intermedia) following acute experimentally induced thermal stress. Fed corals were provided with live rotifers daily, to maintain densities of zooplankton in tanks that are typical of coral reefs. After a 6-week acclimation phase, heated corals were subjected to a +4 °C thermal anomaly for a 7-day period (bleaching phase) then temperatures were returned to normal for a further 2 weeks (recovery phase). Results demonstrated that heated corals had higher survival when they were provided with heterotrophic food. Fed corals experienced reduced loss of chlorophyll a, relative to unfed corals. During the recovery phase, both fed and unfed corals recovered within a few days; however, fed corals recovered to pre-bleaching phase levels of chlorophyll a, whereas unfed corals stabilized approximately one-third below this level. Protein levels of fed corals declined markedly during the bleaching phase, but recovered all of their losses by the end of the recovery phase. In contrast, unfed corals had low protein levels that were maintained throughout the experiment. To the extent that these results are representative of corals' responses to thermal anomalies in nature, the findings imply that availability of particulate food matter has the potential to increase corals' capacity to survive thermally induced bleaching and to ameliorate its sub-lethal effects. They also support the hypothesis that different rates of heterotrophy are an important determinant of variation in resilience to thermal stress among reef environments.

  16. Heavy metals distribution in the coral reef ecosystems of the Northern Red Sea

    NASA Astrophysics Data System (ADS)

    Ali, Abdel-Hamid A. M.; Hamed, Mohamed A.; Abd El-Azim, Hoda

    2011-03-01

    Concentrations of seven heavy metals (Cu, Zn, Pb, Cd, Ni, Co and Fe) were measured in the seawater, sediments, common scleractinian reef-building corals and soft corals (Octocorallia : Alcyonacea) at seven reef sites in the Northern Red Sea: I (Hurghada), II (Ras Za'farana), III (El-Ain Al-Sukhna), IV (El-Tur), V (Sha'b Rashdan), VI (Sharm El-Sheikh) and VII (Dahab). Levels of heavy metals were considerably elevated in seawater, sediments and corals collected from reef sites exposed to increased environmental contamination, as a result of diversified natural and anthropogenic inputs. Soft corals of genera Lithophyton, Sarcophyton and Sinularia showed higher concentrations of Zn, Pb, Cd and Ni than hard coral genera Acropora and Stylophora. Soft coral Sarcophyton trocheliophorum collected from El Ain Al-Suhkna (Gulf of Suez) had greater concentration of Cu, followed by hard corals Acropora pharaonis and Acropora hemprichi. The elevated levels of Zn, Cd and Ni were reported in the dry tissue of soft coral Sinularia spp. On the other hand, the soft coral Lithophyton arboreum displayed the highest concentration of Pb at Sha'b Rashdan (Gulf of Suez) and elevated concentration of Zn at Sharm El-Sheikh. Sediments showed significantly higher concentration of Fe than corals. The higher levels of Fe in hard corals than soft corals reflected the incorporation of Fe into the aragonite and the chelation with the organic matrix of the skeleton. The greater abundance of soft corals in metal-contaminated reef sites and the elevated levels of metals in their tissue suggesting that the soft corals could develop a tolerance mechanism to relatively high concentrations of metals. Although the effects of heavy metals on reef corals were not isolated from the possible effects of other stresses, the percentage cover of dead corals were significantly higher as the concentrations of heavy metals increased.

  17. High Macroalgal Cover and Low Coral Recruitment Undermines the Potential Resilience of the World's Southernmost Coral Reef Assemblages

    PubMed Central

    Hoey, Andrew S.; Pratchett, Morgan S.; Cvitanovic, Christopher

    2011-01-01

    Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32′S, 159°04′E), the worlds' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4%) and fleshy macroalgae (20.9%). Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m−2), however, were 5–200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha−1), and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances. PMID:21991366

  18. Clues to Coral Reef Ecosystem Health: Spectral Analysis Coupled with Radiative Transfer Modeling

    NASA Astrophysics Data System (ADS)

    Guild, L.; Ganapol, B.; Kramer, P.; Armstrong, R.; Gleason, A.; Torres, J.; Johnson, L.; Garfield, N.

    2003-12-01

    Coral reefs are among the world's most productive and biologically rich ecosystems and are some of the oldest ecosystems on Earth. Coralline structures protect coastlines from storms, maintain high diversity of marine life, and provide nurseries for marine species. Coral reefs play a role in carbon cycling through high rates of organic carbon metabolism and calcification. Coral reefs provide fisheries habitat that are the sole protein source for humans on remote islands. Reefs respond immediately to environmental change and therefore are considered "canaries" of the oceans. However, the world's reefs are in peril: they have shrunk 10-50% from their historical extent due to climate change and anthropogenic activity. An important contribution to coral reef research is improved spectral distinction of reef species' health where anthropogenic activity and climate change impacts are high. Relatively little is known concerning the spectral properties of coral or how coral structures reflect and transmit light. New insights into optical processes of corals under stressed conditions can lead to improved interpretation of airborne and satellite data and forecasting of immediate or long-term impacts of events such as bleaching and disease in coral. We are investigating the spatial and spectral resolution required to detect remotely changes in reef health by coupling spectral analysis of in situ spectra and airborne spectral data with a new radiative transfer model called CorMOD2. Challenges include light attenuation by the water column, atmospheric scattering, and scattering caused by the coral themselves that confound the spectral signal. In CorMOD2, input coral reflectance measurements produce modeled absorption through an inversion at each visible wavelength. The first model development phase of CorMOD2 imposes a scattering baseline that is constant regardless of coral condition, and further specifies that coral is optically thick. Evolution of CorMOD2 is towards a coral-specific radiative transfer model that includes coral biochemical concentrations, specific absorptivities of coral components, and transmission measurements from coral surfaces.

  19. Environmental impacts of dredging and other sediment disturbances on corals: a review.

    PubMed

    Erftemeijer, Paul L A; Riegl, Bernhard; Hoeksema, Bert W; Todd, Peter A

    2012-09-01

    A review of published literature on the sensitivity of corals to turbidity and sedimentation is presented, with an emphasis on the effects of dredging. The risks and severity of impact from dredging (and other sediment disturbances) on corals are primarily related to the intensity, duration and frequency of exposure to increased turbidity and sedimentation. The sensitivity of a coral reef to dredging impacts and its ability to recover depend on the antecedent ecological conditions of the reef, its resilience and the ambient conditions normally experienced. Effects of sediment stress have so far been investigated in 89 coral species (~10% of all known reef-building corals). Results of these investigations have provided a generic understanding of tolerance levels, response mechanisms, adaptations and threshold levels of corals to the effects of natural and anthropogenic sediment disturbances. Coral polyps undergo stress from high suspended-sediment concentrations and the subsequent effects on light attenuation which affect their algal symbionts. Minimum light requirements of corals range from <1% to as much as 60% of surface irradiance. Reported tolerance limits of coral reef systems for chronic suspended-sediment concentrations range from <10 mg L(-1) in pristine offshore reef areas to >100 mg L(-1) in marginal nearshore reefs. Some individual coral species can tolerate short-term exposure (days) to suspended-sediment concentrations as high as 1000 mg L(-1) while others show mortality after exposure (weeks) to concentrations as low as 30 mg L(-1). The duration that corals can survive high turbidities ranges from several days (sensitive species) to at least 5-6 weeks (tolerant species). Increased sedimentation can cause smothering and burial of coral polyps, shading, tissue necrosis and population explosions of bacteria in coral mucus. Fine sediments tend to have greater effects on corals than coarse sediments. Turbidity and sedimentation also reduce the recruitment, survival and settlement of coral larvae. Maximum sedimentation rates that can be tolerated by different corals range from <10 mg cm(-2) d(-1) to >400 mg cm(-2) d(-1). The durations that corals can survive high sedimentation rates range from <24 h for sensitive species to a few weeks (>4 weeks of high sedimentation or >14 days complete burial) for very tolerant species. Hypotheses to explain substantial differences in sensitivity between different coral species include the growth form of coral colonies and the size of the coral polyp or calyx. The validity of these hypotheses was tested on the basis of 77 published studies on the effects of turbidity and sedimentation on 89 coral species. The results of this analysis reveal a significant relationship of coral sensitivity to turbidity and sedimentation with growth form, but not with calyx size. Some of the variation in sensitivities reported in the literature may have been caused by differences in the type and particle size of sediments applied in experiments. The ability of many corals (in varying degrees) to actively reject sediment through polyp inflation, mucus production, ciliary and tentacular action (at considerable energetic cost), as well as intraspecific morphological variation and the mobility of free-living mushroom corals, further contribute to the observed differences. Given the wide range of sensitivity levels among coral species and in baseline water quality conditions among reefs, meaningful criteria to limit the extent and turbidity of dredging plumes and their effects on corals will always require site-specific evaluations, taking into account the species assemblage present at the site and the natural variability of local background turbidity and sedimentation. Copyright © 2012 Elsevier Ltd. All rights reserved.

  20. Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral Sea

    PubMed Central

    Englebert, Norbert; Bongaerts, Pim; Muir, Paul R.; Hay, Kyra B.; Pichon, Michel; Hoegh-Guldberg, Ove

    2017-01-01

    Mesophotic coral ecosystems in the Indo-Pacific remain relatively unexplored, particularly at lower mesophotic depths (≥60 m), despite their potentially large spatial extent. Here, we used a remotely operated vehicle to conduct a qualitative assessment of the zooxanthellate coral community at lower mesophotic depths (60–125 m) at 10 different locations in the Great Barrier Reef Marine Park and the Coral Sea Commonwealth Marine Reserve. Lower mesophotic coral communities were present at all 10 locations, with zooxanthellate scleractinian corals extending down to ~100 metres on walls and ~125 m on steep slopes. Lower mesophotic coral communities were most diverse in the 60–80 m zone, while at depths of ≥100 m the coral community consisted almost exclusively of the genus Leptoseris. Collections of coral specimens (n = 213) between 60 and 125 m depth confirmed the presence of at least 29 different species belonging to 18 genera, including several potential new species and geographic/depth range extensions. Overall, this study highlights that lower mesophotic coral ecosystems are likely to be ubiquitous features on the outer reefs of the Great Barrier Reef and atolls of the Coral Sea, and harbour a generic and species richness of corals that is much higher than thus far reported. Further research efforts are urgently required to better understand and manage these ecosystems as part of the Great Barrier Reef Marine Park and Coral Sea Commonwealth Marine Reserve. PMID:28146574

  1. Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral Sea.

    PubMed

    Englebert, Norbert; Bongaerts, Pim; Muir, Paul R; Hay, Kyra B; Pichon, Michel; Hoegh-Guldberg, Ove

    2017-01-01

    Mesophotic coral ecosystems in the Indo-Pacific remain relatively unexplored, particularly at lower mesophotic depths (≥60 m), despite their potentially large spatial extent. Here, we used a remotely operated vehicle to conduct a qualitative assessment of the zooxanthellate coral community at lower mesophotic depths (60-125 m) at 10 different locations in the Great Barrier Reef Marine Park and the Coral Sea Commonwealth Marine Reserve. Lower mesophotic coral communities were present at all 10 locations, with zooxanthellate scleractinian corals extending down to ~100 metres on walls and ~125 m on steep slopes. Lower mesophotic coral communities were most diverse in the 60-80 m zone, while at depths of ≥100 m the coral community consisted almost exclusively of the genus Leptoseris. Collections of coral specimens (n = 213) between 60 and 125 m depth confirmed the presence of at least 29 different species belonging to 18 genera, including several potential new species and geographic/depth range extensions. Overall, this study highlights that lower mesophotic coral ecosystems are likely to be ubiquitous features on the outer reefs of the Great Barrier Reef and atolls of the Coral Sea, and harbour a generic and species richness of corals that is much higher than thus far reported. Further research efforts are urgently required to better understand and manage these ecosystems as part of the Great Barrier Reef Marine Park and Coral Sea Commonwealth Marine Reserve.

  2. Coral Reef Remote Sensing: Helping Managers Protect Reefs in a Changing Climate

    NASA Astrophysics Data System (ADS)

    Eakin, C.; Liu, G.; Li, J.; Muller-Karger, F. E.; Heron, S. F.; Gledhill, D. K.; Christensen, T.; Rauenzahn, J.; Morgan, J.; Parker, B. A.; Skirving, W. J.; Nim, C.; Burgess, T.; Strong, A. E.

    2010-12-01

    Climate change and ocean acidification are already having severe impacts on coral reef ecosystems. Warming oceans have caused corals to bleach, or expel their symbiotic algae (zooxanthellae) with alarming frequency and severity and have contributed to a rise in coral infectious diseases. Ocean acidification is reducing the availability of carbonate ions needed by corals and many other marine organisms to build structural components like skeletons and shells and may already be slowing the coral growth. These two impacts are already killing corals and slowing reef growth, reducing biodiversity and the structure needed to provide crucial ecosystem services. NOAA’s Coral Reef Watch (CRW) uses a combination of satellite data, in situ observations, and models to provide coral reef managers, scientists, and others with information needed to monitor threats to coral reefs. The advance notice provided by remote sensing and models allows resource managers to protect corals, coral reefs, and the services they provide, although managers often encounter barriers to implementation of adaptation strategies. This talk will focus on application of NOAA’s satellite and model-based tools that monitor the risk of mass coral bleaching on a global scale, ocean acidification in the Caribbean, and coral disease outbreaks in selected regions, as well as CRW work to train managers in their use, and barriers to taking action to adapt to climate change. As both anthropogenic CO2 and temperatures will continue to rise, local actions to protect reefs are becoming even more important.

  3. 5. Photocopy of Photograph (original print in the Coral Gables ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3292) Photographer unknown, 1923-25 AERIAL VIEW OF CORAL GABLES BUSINESS SECTION - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL

  4. 13. Photocopy of Photograph (original print in the Coral Gables ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    13. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3327) Photographer unknown, 1923-25 LE JEUNE PLAZA, VIEW FROM CORAL WAY - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL

  5. Corals diseases are a major cause of coral death

    EPA Science Inventory

    Corals, like humans, are susceptible to diseases. Some coral diseases are associated with pathogenic bacteria; however, the causes of most remain unknown. Some diseases trigger rapid and extensive mortality, while others slowly cause localized color changes or injure coral tiss...

  6. The Assimilation of Diazotroph-Derived Nitrogen by Scleractinian Corals Depends on Their Metabolic Status.

    PubMed

    Bednarz, Vanessa N; Grover, Renaud; Maguer, Jean-François; Fine, Maoz; Ferrier-Pagès, Christine

    2017-01-10

    Tropical corals are associated with a diverse community of dinitrogen (N 2 )-fixing prokaryotes (diazotrophs) providing the coral an additional source of bioavailable nitrogen (N) in oligotrophic waters. The overall activity of these diazotrophs changes depending on the current environmental conditions, but to what extent it affects the assimilation of diazotroph-derived N (DDN) by corals is still unknown. Here, in a series of 15 N 2 tracer experiments, we directly quantified DDN assimilation by scleractinian corals from the Red Sea exposed to different environmental conditions. We show that DDN assimilation strongly varied with the corals' metabolic status or with phosphate availability in the water. The very autotrophic shallow-water (~5 m) corals showed low or no DDN assimilation, which significantly increased under elevated phosphate availability (3 µM). Corals that depended more on heterotrophy (i.e., bleached and deep-water [~45 m] corals) assimilated significantly more DDN, which contributed up to 15% of the corals' N demand (compared to 1% in shallow corals). Furthermore, we demonstrate that a substantial part of the DDN assimilated by deep corals was likely obtained from heterotrophic feeding on fixed N compounds and/or diazotrophic cells in the mucus. Conversely, in shallow corals, the net release of mucus, rich in organic carbon compounds, likely enhanced diazotroph abundance and activity and thereby the release of fixed N to the pelagic and benthic reef community. Overall, our results suggest that DDN assimilation by corals varies according to the environmental conditions and is likely linked to the capacity of the coral to acquire nutrients from seawater. Tropical corals are associated with specialized bacteria (i.e., diazotrophs) able to transform dinitrogen (N 2 ) gas into a bioavailable form of nitrogen, but how much of this diazotroph-derived nitrogen (DDN) is assimilated by corals under different environmental conditions is still unknown. Here, we used 15 N 2 labeling to trace the fate of DDN within the coral symbiosis. We show that DDN is assimilated by both the animal host and the endosymbiotic algae. In addition, the amount of assimilated DDN was significantly greater in mesophotic, bleached, or phosphorus-enriched corals than in surface corals, which almost did not take up this nitrogen form. DDN can thus be of particular importance for the nutrient budget of corals whenever they are limited by the availability of other forms of dissolved nutrients. Copyright © 2017 Bednarz et al.

  7. [A review of the role and function of microbes in coral reef ecosystem].

    PubMed

    Zhou, Jin; Jin, Hui; Cai, Zhong-Hua

    2014-03-01

    Coral reef is consisted with several kinds of reef-associated organisms, including coral, fish, benthos, algae and microbes, which is an important marine ecosystem. Coral reef lives in the oligotrophic environment, has very highly primary productivity and net productivity, and is called "tropical rain forest in ocean". In corals, diverse microorganisms exert a significant influence on biogeochemical and ecological processes, including food webs, organism life cycles, and nutrient cycling. With the development of molecular biology, the role of microorganisms in a coral system is becoming more outstanding. In this article, we reviewed current understanding on 1) the onset of coral-bacterial associations; 2) the characteristics of microbes in coral (specificity, plasticity and co-evolution) ; 3) the role and signal regulation of microbes in the health and disease of coral; and 4) the response mechanism of microbes for global climatic change and consequent effects, such as temperature rise, ocean acidification and eutrophication. The aims of this article were to summarize the latest theories and achievements, clear the mechanism of microbial ecology in coral reefs and provide a theoretical reference for better protection and maintaining the coral's biodiversity.

  8. Late Miocene Coral faunas of Iran (Zagros, Aghar, Firuz abad, Fars) palaeoecology and palaeobiogeography

    NASA Astrophysics Data System (ADS)

    Dehbozorgi, M.; Yazdi, M.; Torabi, H.

    2009-04-01

    Late Miocene Corals assemblage from Zagros Iran are investigated with respect to their palaeoecology and palaeobiogeography implications. This Corals are compared with fauna from Mediterranean Tethys and the Indopacific. Small foraminifers are used for biogeography and to support paleoecology interpretation. The studied section situated in the Zagros Mishan F.m is last depositions sea. A distinct horizon characterized by Porites- Antiguastrea assemblage associated Milliolid and Rotalia is interpreted a shallow bioclastic shoal. Patch reef with a porites and faviidae assemblage are a common feature of Oligocene and Miocene coral occurrence and indicate water depth of less than 20m. The diversity of corals in this area are low and all corals are hematypic. Miocene Corals from Mishan F.m Comprise 7 genera and occur in the single horizon or patch reef. This Corals and patch reefs are compared with corals and patch reefs in Qom F.m Central Iran. This corals report from this section: Antiguastrea sp., Monastrea sp., Favites sp., Porites sp., Dichocoenia sp., Asterohelia sp., Leptoria sp. Keywords: Miocene- Iran- Mishan-Zagros- Formation- Tethys seaway- Corals- Palaeoecology- palaeobiogeography.

  9. Identification of Antipathogenic Bacterial Coral Symbionts Against Porites Ulcerative White Spots Disease

    NASA Astrophysics Data System (ADS)

    Sa'adah, Nor; Sabdono, Agus; Diah Permata Wijayanti, dan

    2018-02-01

    Coral reef ecosystems are ecosystems that are vulnerable and susceptible to damage due to the exploitation of ocean resources. One of the factors that cause coral damage is the disease that attacks the coral. Porites Ulcerative White Spots (PUWS) is a coral disease found in Indonesia and attacks the coral genera Porites allegedly caused by pathogenic microbial attacks. The purpose of this study was to identify the symbiotic bacteria on healthy coral that have antipatogenic potency against PUWS. The method used in this research was descriptive explorative. Sampling was done in Kemujan Island, Karimunjawa. Bacteria were isolated from healthy coral and coral affected by PUWS disease. Streak method was used to purify coral bacteria, while overlay and agar diffusion were used to test antipathogenic activity. Bacterial identification was carried out based on polyphasic approach. The results of this study showed that coral bacterial symbionts have antipathogenic activity against PUWS disease. The selected bacteria NM 1.2, NM 1.3 and KPSH 5. NM1.2 were closely related to Pseudoalteromonas piscicida, Pseudoalteromonas flavipulchra and Bacillus flexus, respectively.

  10. Phage therapy for Florida corals?

    USGS Publications Warehouse

    Kellogg, Christina A.

    2007-01-01

    Coral disease is a major cause of reef decline in the Florida Keys. Bacterium has been defined as the most common pathogen (disease-causing organism). Although much is being done to catalog coral diseases, map their locations, determine the causes of disease, or measure the rates of coral demise, very little research has been directed toward actually preventing or eliminating the diseases affecting coral and coral reef decline.

  11. De novo metatranscriptome assembly and coral gene expression profile of Montipora capitata with growth anomaly.

    PubMed

    Frazier, Monika; Helmkampf, Martin; Bellinger, M Renee; Geib, Scott M; Takabayashi, Misaki

    2017-09-11

    Scleractinian corals are a vital component of coral reef ecosystems, and of significant cultural and economic value worldwide. As anthropogenic and natural stressors are contributing to a global decline of coral reefs, understanding coral health is critical to help preserve these ecosystems. Growth anomaly (GA) is a coral disease that has significant negative impacts on coral biology, yet our understanding of its etiology and pathology is lacking. In this study we used RNA-seq along with de novo metatranscriptome assembly and homology assignment to identify coral genes that are expressed in three distinct coral tissue types: tissue from healthy corals ("healthy"), GA lesion tissue from diseased corals ("GA-affected") and apparently healthy tissue from diseased corals ("GA-unaffected"). We conducted pairwise comparisons of gene expression among these three tissue types to identify genes and pathways that help us to unravel the molecular pathology of this coral disease. The quality-filtered de novo-assembled metatranscriptome contained 76,063 genes, of which 13,643 were identified as putative coral genes. Overall gene expression profiles of coral genes revealed high similarity between healthy tissue samples, in contrast to high variance among diseased samples. This indicates GA has a variety of genetic effects at the colony level, including on seemingly healthy (GA-unaffected) tissue. A total of 105 unique coral genes were found differentially expressed among tissue types. Pairwise comparisons revealed the greatest number of differentially expressed genes between healthy and GA-affected tissue (93 genes), followed by healthy and GA-unaffected tissue (33 genes), and GA-affected and -unaffected tissue (7 genes). The putative function of these genes suggests GA is associated with changes in the activity of genes involved in developmental processes and activation of the immune system. This is one of the first transcriptome-level studies to investigate coral GA, and the first metatranscriptome assembly for the M. capitata holobiont. The gene expression data, metatranscriptome assembly and methodology developed through this study represent a significant addition to the molecular information available to further our understanding of this coral disease.

  12. Competitive interactions between corals and turf algae depend on coral colony form.

    PubMed

    Swierts, Thomas; Vermeij, Mark Ja

    2016-01-01

    Turf algae are becoming more abundant on coral reefs worldwide, but their effects on other benthic organisms remain poorly described. To describe the general characteristics of competitive interactions between corals and turf algae, we determined the occurrence and outcomes of coral-turf algal interactions among different coral growth forms (branching, upright, massive, encrusting, plating, and solitary) on a shallow reef in Vietnam. In total, the amount of turf algal interaction, i.e., the proportion of the coral boundary directly bordering turf algae, was quantified for 1,276 coral colonies belonging to 27 genera and the putative outcome of each interaction was noted. The amount of turf algal interaction and the outcome of these interactions differed predictably among the six growth forms. Encrusting corals interacted most often with turf algae, but also competed most successfully against turf algae. The opposite was observed for branching corals, which rarely interacted with turf algae and rarely won these competitive interactions. Including all other growth forms, a positive relationship was found between the amount of competitive interactions with neighboring turf algae and the percentage of such interaction won by the coral. This growth form dependent ability to outcompete turf algae was not only observed among coral species, but also among different growth forms in morphologically plastic coral genera (Acropora, Favia, Favites, Montastrea, Montipora, Porites) illustrating the general nature of this relationship.

  13. The determination of substrate conditions from the orientations of solitary rugose corals

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bolton, J.C.; Driese, S.G.

    1990-10-01

    The substrate conditions of mudstone strata formed in ancient epicontinental settings may be determined from taphonomic assemblages of solitary rugose corals. Equal-area plots on the orientations of preserved corals can be used to infer whether subsequent hydrodynamic conditions affected any post-mortem reworking of the corals. Mechanically stable positions for curved corals can be determined. Curved corals preserved in mechanically stable positions are interpreted to have been deposited on firm or hard substrates. Curved corals preserved in mechanically unstable positions were probably embedded in soft or soupy substrates.

  14. Advancing Ocean Monitoring Near Coral Reefs

    NASA Astrophysics Data System (ADS)

    Heron, Scott F.; Steinberg, Craig R.; Heron, Mal L.; Mantovanelli, Alessandra; Jaffrés, Jasmine B. D.; Skirving, William J.; McAllister, Felicity; Rigby, Paul; Wisdom, Daniel; Bainbridge, Scott

    2010-10-01

    Corals, the foundation of tropical marine ecosystems, exist in a symbiotic relationship with zooxanthellae (algae). The corals obtain much of their energy by consuming compounds derived from photosynthesis by these microorganisms; the microorganisms, which reside in the coral tissue, in turn use waste products from the corals to sustain photosynthesis. This symbiosis is very sensitive to subtle changes in environment, such as increased ocean acidity, temperature, and light. When unduly stressed, the colorful algae are expelled from the corals, causing the corals to “bleach” and potentially die [e.g., van Oppen and Lough, 2009].

  15. Biogeography and Change among Regional Coral Communities across the Western Indian Ocean

    PubMed Central

    McClanahan, Timothy R.; Ateweberhan, Mebrahtu; Darling, Emily S.; Graham, Nicholas A. J.; Muthiga, Nyawira A.

    2014-01-01

    Coral reefs are biodiverse ecosystems structured by abiotic and biotic factors operating across many spatial scales. Regional-scale interactions between climate change, biogeography and fisheries management remain poorly understood. Here, we evaluated large-scale patterns of coral communities in the western Indian Ocean after a major coral bleaching event in 1998. We surveyed 291 coral reef sites in 11 countries and over 30° of latitude between 2004 and 2011 to evaluate variations in coral communities post 1998 across gradients in latitude, mainland-island geography and fisheries management. We used linear mixed-effect hierarchical models to assess total coral cover, the abundance of four major coral families (acroporids, faviids, pocilloporids and poritiids), coral genus richness and diversity, and the bleaching susceptibility of the coral communities. We found strong latitudinal and geographic gradients in coral community structure and composition that supports the presence of a high coral cover and diversity area that harbours temperature-sensitive taxa in the northern Mozambique Channel between Tanzania, northern Mozambique and northern Madagascar. Coral communities in the more northern latitudes of Kenya, Seychelles and the Maldives were generally composed of fewer bleaching-tolerant coral taxa and with reduced richness and diversity. There was also evidence for continued declines in the abundance of temperature-sensitive taxa and community change after 2004. While there are limitations of our regional dataset in terms of spatial and temporal replication, these patterns suggest that large-scale interactions between biogeographic factors and strong temperature anomalies influence coral communities while smaller-scale factors, such as the effect of fisheries closures, were weak. The northern Mozambique Channel, while not immune to temperature disturbances, shows continued signs of resistance to climate disturbances and remains a priority for future regional conservation and management actions. PMID:24718371

  16. Effects of coral bleaching on the obligate coral-dwelling crab Trapezia cymodoce

    NASA Astrophysics Data System (ADS)

    Stella, J. S.; Munday, P. L.; Jones, G. P.

    2011-09-01

    Corals are an essential and threatened habitat for a diverse range of reef-associated animals. Episodes of coral bleaching are predicted to increase in frequency and intensity over coming decades, yet the effects of coral-host bleaching on the associated animal communities remain poorly understood. The present study investigated the effects of host-colony bleaching on the obligate coral-dwelling crab, Trapezia cymodoce, during a natural bleaching event in the lagoon of Lizard Island, Australia. Branching corals, which harbour the highest diversity of coral associates, comprised 13% of live coral cover at the study site, with 83% affected by bleaching. Crabs on healthy and bleached colonies of Pocillopora damicornis were monitored over a 5-week period to determine whether coral bleaching affected crab density and movement patterns. All coral colonies initially contained one breeding pair of crabs. There was a significant decline in crab density on bleached corals after 5 weeks, with many corals losing one or both crabs, yet all healthy colonies retained a mating pair. Fecundity of crabs collected from bleached and healthy colonies of P. damicornis was also compared. The size of egg clutches of crabs collected from bleached hosts was 40% smaller than those from healthy hosts, indicating a significant reduction in fecundity. A laboratory experiment on movement patterns found that host-colony bleaching also prompted crabs to emigrate in search of more suitable colonies. Emigrant crabs engaged in aggressive interactions with occupants of healthy hosts, with larger crabs always usurping occupants of a smaller size. Decreased densities and clutch sizes, along with increased competitive interactions, could potentially result in a population decline of these important coral associates with cascading effects on coral health.

  17. Biogeography and change among regional coral communities across the Western Indian Ocean.

    PubMed

    McClanahan, Timothy R; Ateweberhan, Mebrahtu; Darling, Emily S; Graham, Nicholas A J; Muthiga, Nyawira A

    2014-01-01

    Coral reefs are biodiverse ecosystems structured by abiotic and biotic factors operating across many spatial scales. Regional-scale interactions between climate change, biogeography and fisheries management remain poorly understood. Here, we evaluated large-scale patterns of coral communities in the western Indian Ocean after a major coral bleaching event in 1998. We surveyed 291 coral reef sites in 11 countries and over 30° of latitude between 2004 and 2011 to evaluate variations in coral communities post 1998 across gradients in latitude, mainland-island geography and fisheries management. We used linear mixed-effect hierarchical models to assess total coral cover, the abundance of four major coral families (acroporids, faviids, pocilloporids and poritiids), coral genus richness and diversity, and the bleaching susceptibility of the coral communities. We found strong latitudinal and geographic gradients in coral community structure and composition that supports the presence of a high coral cover and diversity area that harbours temperature-sensitive taxa in the northern Mozambique Channel between Tanzania, northern Mozambique and northern Madagascar. Coral communities in the more northern latitudes of Kenya, Seychelles and the Maldives were generally composed of fewer bleaching-tolerant coral taxa and with reduced richness and diversity. There was also evidence for continued declines in the abundance of temperature-sensitive taxa and community change after 2004. While there are limitations of our regional dataset in terms of spatial and temporal replication, these patterns suggest that large-scale interactions between biogeographic factors and strong temperature anomalies influence coral communities while smaller-scale factors, such as the effect of fisheries closures, were weak. The northern Mozambique Channel, while not immune to temperature disturbances, shows continued signs of resistance to climate disturbances and remains a priority for future regional conservation and management actions.

  18. Calcification by juvenile corals under heterotrophy and elevated CO2

    NASA Astrophysics Data System (ADS)

    Drenkard, E. J.; Cohen, A. L.; McCorkle, D. C.; de Putron, S. J.; Starczak, V. R.; Zicht, A. E.

    2013-09-01

    Ocean acidification (OA) threatens the existence of coral reefs by slowing the rate of calcium carbonate (CaCO3) production of framework-building corals thus reducing the amount of CaCO3 the reef can produce to counteract natural dissolution. Some evidence exists to suggest that elevated levels of dissolved inorganic nutrients can reduce the impact of OA on coral calcification. Here, we investigated the potential for enhanced energetic status of juvenile corals, achieved via heterotrophic feeding, to modulate the negative impact of OA on calcification. Larvae of the common Atlantic golf ball coral, Favia fragum, were collected and reared for 3 weeks under ambient (421 μatm) or significantly elevated (1,311 μatm) CO2 conditions. The metamorphosed, zooxanthellate spat were either fed brine shrimp (i.e., received nutrition from photosynthesis plus heterotrophy) or not fed (i.e., primarily autotrophic). Regardless of CO2 condition, the skeletons of fed corals exhibited accelerated development of septal cycles and were larger than those of unfed corals. At each CO2 level, fed corals accreted more CaCO3 than unfed corals, and fed corals reared under 1,311 μatm CO2 accreted as much CaCO3 as unfed corals reared under ambient CO2. However, feeding did not alter the sensitivity of calcification to increased CO2; ∆ calcification/∆Ω was comparable for fed and unfed corals. Our results suggest that calcification rates of nutritionally replete juvenile corals will decline as OA intensifies over the course of this century. Critically, however, such corals could maintain higher rates of skeletal growth and CaCO3 production under OA than those in nutritionally limited environments.

  19. Crown-of-thorns starfish predation and physical injuries promote brown band disease on corals

    NASA Astrophysics Data System (ADS)

    Katz, Sefano M.; Pollock, F. Joseph; Bourne, David G.; Willis, Bette L.

    2014-09-01

    Brown band (BrB) disease manifests on corals as a ciliate-dominated lesion that typically progresses rapidly causing extensive mortality, but it is unclear whether the dominant ciliate Porpostoma guamense is a primary or an opportunistic pathogen, the latter taking advantage of compromised coral tissue or depressed host resistance. In this study, manipulative aquarium-based experiments were used to investigate the role of P. guamense as a pathogen when inoculated onto fragments of the coral Acropora hyacinthus that were either healthy, preyed on by Acanthaster planci (crown-of-thorns starfish; COTS), or experimentally injured. Following ciliate inoculation, BrB lesions developed on all of COTS-predated fragments ( n = 9 fragments) and progressed up to 4.6 ± 0.3 cm d-1, resulting in ~70 % of coral tissue loss after 4 d. Similarly, BrB lesions developed rapidly on experimentally injured corals and ~38 % of coral tissue area was lost 60 h after inoculation. In contrast, no BrB lesions were observed on healthy corals following experimental inoculations. A choice experiment demonstrated that ciliates are strongly attracted to physically injured corals, with over 55 % of inoculated ciliates migrating to injured corals and forming distinct lesions, whereas ciliates did not migrate to healthy corals. Our results indicate that ciliates characteristic of BrB disease are opportunistic pathogens that rapidly migrate to and colonise compromised coral tissue, leading to rapid coral mortality, particularly following predation or injury. Predicted increases in tropical storms, cyclones, and COTS outbreaks are likely to increase the incidence of coral injury in the near future, promoting BrB disease and further contributing to declines in coral cover.

  20. Differential response of coral communities to Caulerpa spp. bloom in the reefs of Indian Ocean.

    PubMed

    Manikandan, B; Ravindran, J

    2017-02-01

    Coral reef ecosystems are disturbed in tandem by climatic and anthropogenic stressors. A number of factors act synergistically to reduce the live coral cover and threaten the existence of reefs. Continuous monitoring of the coral communities during 2012-2014 captured an unprecedented growth of macroalgae as a bloom at Gulf of Mannar (GoM) and Palk Bay (PB) which are protected and unprotected reefs, respectively. The two reefs varying in their protection level enabled to conduct an assessment on the response of coral communities and their recovery potential during and after the macroalgal bloom. Surveys in 2012 revealed a live coral cover of 36.8 and 14.6% in GoM and PB, respectively. Live coral cover was lost at an annual rate of 4% in PB due to the Caulerpa racemosa blooms that occurred in 2013 and 2014. In GoM, the loss of live coral cover was estimated to be 16.5% due to C. taxifolia bloom in 2013. Tissue regeneration by the foliose and branching coral morphotypes aided the recovery of live coral cover in GoM, whereas the chances for the recovery of live coral cover in PB reef were low, primarily due to frequent algal blooms, and the existing live coral cover was mainly due to the abundance of slow-growing massive corals. In combination, results of this study suggested that the recovery of a coral reef after a macroalgal bloom largely depends on coral species composition and the frequency of stress events. A further study linking macroalgal bloom to its specific cause is essential for the successful intervention and management.

  1. Bacterial profiling of White Plague Disease across corals and oceans indicates a conserved and distinct disease microbiome

    PubMed Central

    Roder, Cornelia; Arif, Chatchanit; Daniels, Camille; Weil, Ernesto; Voolstra, Christian R

    2014-01-01

    Coral diseases are characterized by microbial community shifts in coral mucus and tissue, but causes and consequences of these changes are vaguely understood due to the complexity and dynamics of coral-associated bacteria. We used 16S rRNA gene microarrays to assay differences in bacterial assemblages of healthy and diseased colonies displaying White Plague Disease (WPD) signs from two closely related Caribbean coral species, Orbicella faveolata and Orbicella franksi. Analysis of differentially abundant operational taxonomic units (OTUs) revealed strong differences between healthy and diseased specimens, but not between coral species. A subsequent comparison to data from two Indo-Pacific coral species (Pavona duerdeni and Porites lutea) revealed distinct microbial community patterns associated with ocean basin, coral species and health state. Coral species were clearly separated by site, but also, the relatedness of the underlying bacterial community structures resembled the phylogenetic relationship of the coral hosts. In diseased samples, bacterial richness increased and putatively opportunistic bacteria were consistently more abundant highlighting the role of opportunistic conditions in structuring microbial community patterns during disease. Our comparative analysis shows that it is possible to derive conserved bacterial footprints of diseased coral holobionts that might help in identifying key bacterial species related to the underlying etiopathology. Furthermore, our data demonstrate that similar-appearing disease phenotypes produce microbial community patterns that are consistent over coral species and oceans, irrespective of the putative underlying pathogen. Consequently, profiling coral diseases by microbial community structure over multiple coral species might allow the development of a comparative disease framework that can inform on cause and relatedness of coral diseases. PMID:24350609

  2. An updated assessment of Symbiodinium spp. that associate with common scleractinian corals from Moorea (French Polynesia) reveals high diversity among background symbionts and a novel finding of clade B.

    PubMed

    Rouzé, Héloïse; Lecellier, Gaël J; Saulnier, Denis; Planes, Serge; Gueguen, Yannick; Wirshing, Herman H; Berteaux-Lecellier, Véronique

    2017-01-01

    The adaptative bleaching hypothesis (ABH) states that, depending on the symbiotic flexibility of coral hosts (i.e., the ability of corals to "switch" or "shuffle" their algal symbionts), coral bleaching can lead to a change in the composition of their associated Symbiodinium community and, thus, contribute to the coral's overall survival. In order to determine the flexibility of corals, molecular tools are required to provide accurate species delineations and to detect low levels of coral-associated Symbiodinium . Here, we used highly sensitive quantitative (real-time) PCR (qPCR) technology to analyse five common coral species from Moorea (French Polynesia), previously screened using only traditional molecular methods, to assess the presence of low-abundance (background) Symbiodinium spp. Similar to other studies, each coral species exhibited a strong specificity to a particular clade, irrespective of the environment. In addition, however, each of the five species harboured at least one additional Symbiodinium clade, among clades A-D, at background levels. Unexpectedly, and for the first time in French Polynesia, clade B was detected as a coral symbiont. These results increase the number of known coral- Symbiodinium associations from corals found in French Polynesia, and likely indicate an underestimation of the ability of the corals in this region to associate with and/or "shuffle" different Symbiodinium clades. Altogether our data suggest that corals from French Polynesia may favor a trade-off between optimizing symbioses with a specific Symbiodinium clade(s), maintaining associations with particular background clades that may play a role in the ability of corals to respond to environmental change.

  3. Allelochemicals Produced by Brown Macroalgae of the Lobophora Genus Are Active against Coral Larvae and Associated Bacteria, Supporting Pathogenic Shifts to Vibrio Dominance

    PubMed Central

    Bromhall, Katrina; Motti, Cherie A.; Munn, Colin B.; Bourne, David G.

    2016-01-01

    ABSTRACT Pervasive environmental stressors on coral reefs are attributed with shifting the competitive balance in favor of alternative dominants, such as macroalgae. Previous studies have demonstrated that macroalgae compete with corals via a number of mechanisms, including the production of potent primary and secondary metabolites that can influence coral-associated microbial communities. The present study investigates the effects of the Pacific brown macroalga Lobophora sp. (due to the shifting nature of the Lobophora species complex, it will be referred to here as Lobophora sp.) on coral bacterial isolates, coral larvae, and the microbiome associated with the coral Porites cylindrica. Crude aqueous and organic macroalgal extracts were found to inhibit the growth of coral-associated bacteria. Extracts and fractions were also shown to inhibit coral larval settlement and cause mortality at concentrations lower (<0.3 mg · ml−1) than calculated natural concentrations (4.4 mg · ml−1). Microbial communities associated with coral tissues exposed to aqueous (e.g., hydrophilic) crude extracts demonstrated a significant shift to Vibrio dominance and a loss of sequences related to the putative coral bacterial symbiont, Endozoicomonas sp., based on 16S rRNA amplicon sequencing. This study contributes to growing evidence that macroalgal allelochemicals, dissolved organic material, and native macroalgal microbial assemblages all play a role in shifting the microbial equilibrium of the coral holobiont away from a beneficial state, contributing to a decline in coral fitness and a shift in ecosystem structure. IMPORTANCE Diverse microbial communities associate with coral tissues and mucus, providing important protective and nutritional services, but once disturbed, the microbial equilibrium may shift from a beneficial state to one that is detrimental or pathogenic. Macroalgae (e.g., seaweeds) can physically and chemically interact with corals, causing abrasion, bleaching, and overall stress. This study contributes to a growing body of evidence suggesting that macroalgae play a critical role in shifting the coral holobiont equilibrium, which may promote the invasion of opportunistic pathogens and cause coral mortality, facilitating additional macroalgal growth and invasion in the reef. Thus, macroalgae not only contribute to a decline in coral fitness but also influence coral reef ecosystem structure. PMID:27795310

  4. Allelochemicals Produced by Brown Macroalgae of the Lobophora Genus Are Active against Coral Larvae and Associated Bacteria, Supporting Pathogenic Shifts to Vibrio Dominance.

    PubMed

    Morrow, Kathleen M; Bromhall, Katrina; Motti, Cherie A; Munn, Colin B; Bourne, David G

    2017-01-01

    Pervasive environmental stressors on coral reefs are attributed with shifting the competitive balance in favor of alternative dominants, such as macroalgae. Previous studies have demonstrated that macroalgae compete with corals via a number of mechanisms, including the production of potent primary and secondary metabolites that can influence coral-associated microbial communities. The present study investigates the effects of the Pacific brown macroalga Lobophora sp. (due to the shifting nature of the Lobophora species complex, it will be referred to here as Lobophora sp.) on coral bacterial isolates, coral larvae, and the microbiome associated with the coral Porites cylindrica. Crude aqueous and organic macroalgal extracts were found to inhibit the growth of coral-associated bacteria. Extracts and fractions were also shown to inhibit coral larval settlement and cause mortality at concentrations lower (<0.3 mg · ml -1 ) than calculated natural concentrations (4.4 mg · ml -1 ). Microbial communities associated with coral tissues exposed to aqueous (e.g., hydrophilic) crude extracts demonstrated a significant shift to Vibrio dominance and a loss of sequences related to the putative coral bacterial symbiont, Endozoicomonas sp., based on 16S rRNA amplicon sequencing. This study contributes to growing evidence that macroalgal allelochemicals, dissolved organic material, and native macroalgal microbial assemblages all play a role in shifting the microbial equilibrium of the coral holobiont away from a beneficial state, contributing to a decline in coral fitness and a shift in ecosystem structure. Diverse microbial communities associate with coral tissues and mucus, providing important protective and nutritional services, but once disturbed, the microbial equilibrium may shift from a beneficial state to one that is detrimental or pathogenic. Macroalgae (e.g., seaweeds) can physically and chemically interact with corals, causing abrasion, bleaching, and overall stress. This study contributes to a growing body of evidence suggesting that macroalgae play a critical role in shifting the coral holobiont equilibrium, which may promote the invasion of opportunistic pathogens and cause coral mortality, facilitating additional macroalgal growth and invasion in the reef. Thus, macroalgae not only contribute to a decline in coral fitness but also influence coral reef ecosystem structure. © Crown copyright 2016.

  5. 75 FR 14571 - Western Pacific Fishery Management Council; Public Meetings

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-03-26

    ... for bottomfish, coral reef, precious coral and crustacean fisheries. Reports will be provided on... Archipelago Fishery Ecosystem Plan Annual Report Modules for bottomfish, coral reef, precious coral and..., sea turtle interaction mitigation in the American Samoa longline Fishery, DMWR coral reef ecosystem...

  6. 75 FR 48934 - Coral Reef Conservation Program Implementation Guidelines

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-12

    ...-01] RIN 0648-ZC19 Coral Reef Conservation Program Implementation Guidelines AGENCY: National Oceanic... Guidelines (Guidelines) for the Coral Reef Conservation Program (CRCP or Program) under the Coral Reef... assistance for coral reef conservation projects under the Act. NOAA revised the Implementation Guidelines for...

  7. 11. Photocopy of Photograph (original Print in the Coral Gables ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    11. Photocopy of Photograph (original Print in the Coral Gables Public Library, Fishbaugh Collection, M 3809) Photographer unknown, 1923-25 PONCE DE LEON PLAZA, FROM CORAL WAY AND GRANADA BOULEVARD - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL

  8. Mortality, recovery, and community shifts of scleractinian corals in Puerto Rico one decade after the 2005 regional bleaching event

    PubMed Central

    Amirrezvani, Ali

    2017-01-01

    This work analyzes the mortality, recovery, and shifts in the composition of scleractinian corals from Puerto Rico one decade after the 2005 regional coral bleaching event. Temporal and spatial patterns of coral community structure were examined using a stratified, non-random sampling approach based on five permanent transects per reef at 16 reef stations. A negative correlation between percent coral cover loss and light attenuation coefficient (Kd490) was observed, suggesting that light attenuation, as influenced by water turbidity and depth, played a major role in coral protection during the bleaching event (“sunblock effect”). Responses of coral assemblages varied after the bleaching event, including shifts of cover from massive corals (Orbicella spp.) to opportunistic (Porites astreoides) and branching corals (Madracis auretenra, P. porites) and/or turf algae; partial recovery of reef substrate cover by O. annularis complex; and no measurable changes in coral assemblages before and after the event. PMID:28761791

  9. Mortality, recovery, and community shifts of scleractinian corals in Puerto Rico one decade after the 2005 regional bleaching event.

    PubMed

    García-Sais, Jorge R; Williams, Stacey M; Amirrezvani, Ali

    2017-01-01

    This work analyzes the mortality, recovery, and shifts in the composition of scleractinian corals from Puerto Rico one decade after the 2005 regional coral bleaching event. Temporal and spatial patterns of coral community structure were examined using a stratified, non-random sampling approach based on five permanent transects per reef at 16 reef stations. A negative correlation between percent coral cover loss and light attenuation coefficient (Kd 490 ) was observed, suggesting that light attenuation, as influenced by water turbidity and depth, played a major role in coral protection during the bleaching event ("sunblock effect"). Responses of coral assemblages varied after the bleaching event, including shifts of cover from massive corals ( Orbicella spp.) to opportunistic ( Porites astreoides ) and branching corals ( Madracis auretenra , P. porites ) and/or turf algae; partial recovery of reef substrate cover by O. annularis complex; and no measurable changes in coral assemblages before and after the event.

  10. Coral microbial community dynamics in response to anthropogenic impacts near a major city in the central Red Sea.

    PubMed

    Ziegler, Maren; Roik, Anna; Porter, Adam; Zubier, Khalid; Mudarris, Mohammed S; Ormond, Rupert; Voolstra, Christian R

    2016-04-30

    Coral-associated bacteria play an increasingly recognized part in coral health. We investigated the effect of local anthropogenic impacts on coral microbial communities on reefs near Jeddah, the largest city on the Saudi Arabian coast of the central Red Sea. We analyzed the bacterial community structure of water and corals (Pocillopora verrucosa and Acropora hemprichii) at sites that were relatively unimpacted, exposed to sedimentation & local sewage, or in the discharge area of municipal wastewaters. Coral microbial communities were significantly different at impacted sites: in both corals the main symbiotic taxon decreased in abundance. In contrast, opportunistic bacterial families, such as e.g. Vibrionaceae and Rhodobacteraceae, were more abundant in corals at impacted sites. In conclusion, microbial community response revealed a measurable footprint of anthropogenic impacts to coral ecosystems close to Jeddah, even though the corals appeared visually healthy. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  11. In vivo imaging of coral tissue and skeleton with optical coherence tomography.

    PubMed

    Wangpraseurt, Daniel; Wentzel, Camilla; Jacques, Steven L; Wagner, Michael; Kühl, Michael

    2017-03-01

    Application of optical coherence tomography (OCT) for in vivo imaging of tissue and skeleton structure of intact living corals enabled the non-invasive visualization of coral tissue layers (endoderm versus ectoderm), skeletal cavities and special structures such as mesenterial filaments and mucus release from intact living corals. Coral host chromatophores containing green fluorescent protein-like pigment granules appeared hyper-reflective to near-infrared radiation allowing for excellent optical contrast in OCT and a rapid characterization of chromatophore size, distribution and abundance. In vivo tissue plasticity could be quantified by the linear contraction velocity of coral tissues upon illumination resulting in dynamic changes in the live coral tissue surface area, which varied by a factor of 2 between the contracted and expanded state of a coral. Our study provides a novel view on the in vivo organization of coral tissue and skeleton and highlights the importance of microstructural dynamics for coral ecophysiology. © 2017 The Author(s).

  12. Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales.

    PubMed

    Zaneveld, Jesse R; Burkepile, Deron E; Shantz, Andrew A; Pritchard, Catharine E; McMinds, Ryan; Payet, Jérôme P; Welsh, Rory; Correa, Adrienne M S; Lemoine, Nathan P; Rosales, Stephanie; Fuchs, Corinne; Maynard, Jeffrey A; Thurber, Rebecca Vega

    2016-06-07

    Losses of corals worldwide emphasize the need to understand what drives reef decline. Stressors such as overfishing and nutrient pollution may reduce resilience of coral reefs by increasing coral-algal competition and reducing coral recruitment, growth and survivorship. Such effects may themselves develop via several mechanisms, including disruption of coral microbiomes. Here we report the results of a 3-year field experiment simulating overfishing and nutrient pollution. These stressors increase turf and macroalgal cover, destabilizing microbiomes, elevating putative pathogen loads, increasing disease more than twofold and increasing mortality up to eightfold. Above-average temperatures exacerbate these effects, further disrupting microbiomes of unhealthy corals and concentrating 80% of mortality in the warmest seasons. Surprisingly, nutrients also increase bacterial opportunism and mortality in corals bitten by parrotfish, turning normal trophic interactions deadly for corals. Thus, overfishing and nutrient pollution impact reefs down to microbial scales, killing corals by sensitizing them to predation, above-average temperatures and bacterial opportunism.

  13. High CO2 enhances the competitive strength of seaweeds over corals.

    PubMed

    Diaz-Pulido, Guillermo; Gouezo, Marine; Tilbrook, Bronte; Dove, Sophie; Anthony, Kenneth R N

    2011-02-01

    Space competition between corals and seaweeds is an important ecological process underlying coral-reef dynamics. Processes promoting seaweed growth and survival, such as herbivore overfishing and eutrophication, can lead to local reef degradation. Here, we present the case that increasing concentrations of atmospheric CO(2) may be an additional process driving a shift from corals to seaweeds on reefs. Coral (Acropora intermedia) mortality in contact with a common coral-reef seaweed (Lobophora papenfussii) increased two- to threefold between background CO(2) (400 ppm) and highest level projected for late 21st century (1140 ppm). The strong interaction between CO(2) and seaweeds on coral mortality was most likely attributable to a chemical competitive mechanism, as control corals with algal mimics showed no mortality. Our results suggest that coral (Acropora) reefs may become increasingly susceptible to seaweed proliferation under ocean acidification, and processes regulating algal abundance (e.g. herbivory) will play an increasingly important role in maintaining coral abundance. © 2010 Blackwell Publishing Ltd/CNRS.

  14. The effects of coral bleaching on settlement preferences and growth of juvenile butterflyfishes.

    PubMed

    Cole, A J; Lawton, R J; Pisapia, C; Pratchett, M S

    2014-07-01

    Coral bleaching and associated mortality is an increasingly prominent threat to coral reef ecosystems. Although the effects of bleaching-induced coral mortality on reef fishes have been well demonstrated, corals can remain bleached for several weeks prior to recovery or death and little is known about how bleaching affects resident fishes during this time period. This study compared growth rates of two species of juvenile butterflyfishes (Chaetodon aureofasciatus and Chaetodon lunulatus) that were restricted to feeding upon either bleached or healthy coral tissue of Acropora spathulata or Pocillopora damicornis. Coral condition (bleached vs. unbleached) had no significant effects on changes in total length or weight over a 23-day period. Likewise, in a habitat choice experiment, juvenile butterflyfishes did not discriminate between healthy and bleached corals, but actively avoided using recently dead colonies. These results indicate that juvenile coral-feeding fishes are relatively robust to short term effects of bleaching events, provided that the corals do recover. Crown Copyright © 2014. Published by Elsevier Ltd. All rights reserved.

  15. Fluctuations in coral health of four common inshore reef corals in response to seasonal and anthropogenic changes in water quality.

    PubMed

    Browne, Nicola K; Tay, Jason K L; Low, Jeffrey; Larson, Ole; Todd, Peter A

    2015-04-01

    Environmental drivers of coral condition (maximum quantum yield, symbiont density, chlorophyll a content and coral skeletal growth rates) were assessed in the equatorial inshore coastal waters of Singapore, where the amplitude of seasonal variation is low, but anthropogenic influence is relatively high. Water quality variables (sediments, nutrients, trace metals, temperature, light) explained between 52 and 83% of the variation in coral condition, with sediments and light availability as key drivers of foliose corals (Merulina ampliata, Pachyseris speciosa), and temperature exerting a greater influence on a branching coral (Pocillopora damicornis). Seasonal reductions in water quality led to high chlorophyll a concentrations and maximum quantum yields in corals, but low growth rates. These marginal coral communities are potentially vulnerable to climate change, hence, we propose water quality thresholds for coral growth with the aim of mitigating both local and global environmental impacts. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. High CO2 enhances the competitive strength of seaweeds over corals

    PubMed Central

    Diaz-Pulido, Guillermo; Gouezo, Marine; Tilbrook, Bronte; Dove, Sophie; Anthony, Kenneth R N

    2011-01-01

    Space competition between corals and seaweeds is an important ecological process underlying coral-reef dynamics. Processes promoting seaweed growth and survival, such as herbivore overfishing and eutrophication, can lead to local reef degradation. Here, we present the case that increasing concentrations of atmospheric CO2 may be an additional process driving a shift from corals to seaweeds on reefs. Coral (Acropora intermedia) mortality in contact with a common coral-reef seaweed (Lobophora papenfussii) increased two- to threefold between background CO2 (400 ppm) and highest level projected for late 21st century (1140 ppm). The strong interaction between CO2 and seaweeds on coral mortality was most likely attributable to a chemical competitive mechanism, as control corals with algal mimics showed no mortality. Our results suggest that coral (Acropora) reefs may become increasingly susceptible to seaweed proliferation under ocean acidification, and processes regulating algal abundance (e.g. herbivory) will play an increasingly important role in maintaining coral abundance. PMID:21155961

  17. A unique coral community in the mangroves of Hurricane Hole, St. John, US Virgin Islands

    USGS Publications Warehouse

    Rogers, Caroline S.

    2017-01-01

    Corals do not typically thrive in mangrove environments. However, corals are growing on and near the prop roots of red mangrove trees in Hurricane Hole, an area within the Virgin Islands Coral Reef National Monument under the protection of the US National Park Service in St. John, US Virgin Islands. This review summarizes current knowledge of the remarkable biodiversity of this area. Over 30 scleractinian coral species, about the same number as documented to date from nearby coral reefs, grow here. No other mangrove ecosystems in the Caribbean are known to have so many coral species. This area may be a refuge from changing climate, as these corals weathered the severe thermal stress and subsequent disease outbreak that caused major coral loss on the island’s coral reefs in 2005 and 2006. Shading by the red mangrove trees reduces the stress that leads to coral bleaching. Seawater temperatures in these mangroves are more variable than those on the reefs, and some studies have shown that this variability results in corals with a greater resistance to higher temperatures. The diversity of sponges and fish is also high, and a new genus of serpulid worm was recently described. Continuing research may lead to the discovery of more new species.

  18. Relative Pigment Composition and Remote Sensing Reflectance of Caribbean Shallow-Water Corals

    PubMed Central

    Torres-Pérez, Juan L.; Guild, Liane S.; Armstrong, Roy A.; Corredor, Jorge; Zuluaga-Montero, Anabella; Polanco, Ramón

    2015-01-01

    Reef corals typically contain a number of pigments, mostly due to their symbiotic relationship with photosynthetic dinoflagellates. These pigments usually vary in presence and concentration and influence the spectral characteristics of corals. We studied the variations in pigment composition among seven Caribbean shallow-water Scleractinian corals by means of High Performance Liquid Chromatography (HPLC) analysis to further resolve the discrimination of corals. We found a total of 27 different pigments among the coral species, including some alteration products of the main pigments. Additionally, pigments typically found in endolithic algae were also identified. A Principal Components Analysis and a Hierarchical Cluster Analysis showed the separation of coral species based on pigment composition. All the corals were collected under the same physical environmental conditions. This suggests that pigment in the coral’s symbionts might be more genetically-determined than influenced by prevailing physical conditions of the reef. We further investigated the use of remote sensing reflectance (Rrs) as a tool for estimating the total pigment concentration of reef corals. Depending on the coral species, the Rrs and the total symbiont pigment concentration per coral tissue area correlation showed 79.5–98.5% confidence levels demonstrating its use as a non-invasive robust technique to estimate pigment concentration in studies of coral reef biodiversity and health. PMID:26619210

  19. Turf algae-mediated coral damage in coastal reefs of Belize, Central America.

    PubMed

    Wild, Christian; Jantzen, Carin; Kremb, Stephan Georg

    2014-01-01

    Many coral reefs in the Caribbean experienced substantial changes in their benthic community composition during the last decades. This often resulted in phase shifts from scleractinian coral dominance to that by other benthic invertebrate or algae. However, knowledge about how the related role of coral-algae contacts may negatively affect corals is scarce. Therefore, benthic community composition, abundance of algae grazers, and the abundance and character of coral-algae contacts were assessed in situ at 13 Belizean reef sites distributed along a distance gradient to the Belizean mainland (12-70 km): Mesoamerican Barrier Reef (inshore), Turneffe Atoll (inner and outer midshore), and Lighthouse Reef (offshore). In situ surveys revealed significantly higher benthic cover by scleractinian corals at the remote Lighthouse Reef (26-29%) when compared to the other sites (4-19%). The abundance of herbivorous fish and the sea urchin Diadema antillarum significantly increased towards the offshore reef sites, while the occurrence of direct coral-algae contacts consequently increased significantly with decreasing distance to shore. About 60% of these algae contacts were harmful (exhibiting coral tissue damage, pigmentation change, or overgrowth) for corals (mainly genera Orbicella and Agaricia), particularly when filamentous turf algae were involved. These findings provide support to the hypothesis that (turf) algae-mediated coral damage occurs in Belizean coastal, near-shore coral reefs.

  20. Effects of ocean acidification on the potency of macroalgal allelopathy to a common coral

    PubMed Central

    Del Monaco, Carlos; Hay, Mark E.; Gartrell, Patrick; Mumby, Peter J.; Diaz-Pulido, Guillermo

    2017-01-01

    Many coral reefs have phase shifted from coral to macroalgal dominance. Ocean acidification (OA) due to elevated CO2 is hypothesised to advantage macroalgae over corals, contributing to these shifts, but the mechanisms affecting coral-macroalgal interactions under OA are unknown. Here, we show that (i) three common macroalgae are more damaging to a common coral when they compete under CO2 concentrations predicted to occur in 2050 and 2100 than under present-day conditions, (ii) that two macroalgae damage corals via allelopathy, and (iii) that one macroalga is allelopathic under conditions of elevated CO2, but not at ambient levels. Lipid-soluble, surface extracts from the macroalga Canistrocarpus (=Dictyota) cervicornis were significantly more damaging to the coral Acropora intermedia growing in the field if these extracts were from thalli grown under elevated vs ambient concentrations of CO2. Extracts from the macroalgae Chlorodesmis fastigiata and Amansia glomerata were not more potent when grown under elevated CO2. Our results demonstrate increasing OA advantages seaweeds over corals, that algal allelopathy can mediate coral-algal interactions, and that OA may enhance the allelopathy of some macroalgae. Other mechanisms also affect coral-macroalgal interactions under OA, and OA further suppresses the resilience of coral reefs suffering blooms of macroalgae. PMID:28145458

  1. Climate-driven coral reorganisation influences aggressive behaviour in juvenile coral-reef fishes

    NASA Astrophysics Data System (ADS)

    Kok, Judith E.; Graham, Nicholas A. J.; Hoogenboom, Mia O.

    2016-06-01

    Globally, habitat degradation is altering the abundance and diversity of species in a variety of ecosystems. This study aimed to determine how habitat degradation, in terms of changing coral composition under climate change, affected abundance, species richness and aggressive behaviour of juveniles of three damselfishes ( Pomacentrus moluccensis, P. amboinensis and Dischistodus perspicillatus, in order of decreasing reliance on coral). Patch reefs were constructed to simulate two types of reefs: present-day reefs that are vulnerable to climate-induced coral bleaching, and reefs with more bleaching-robust coral taxa, thereby simulating the likely future of coral reefs under a warming climate. Fish communities were allowed to establish naturally on the reefs during the summer recruitment period. Climate-robust reefs had lower total species richness of coral-reef fishes than climate-vulnerable reefs, but total fish abundance was not significantly different between reef types (pooled across all species and life-history stages). The nature of aggressive interactions, measured as the number of aggressive chases, varied according to coral composition; on climate-robust reefs, juveniles used the substratum less often to avoid aggression from competitors, and interspecific aggression became relatively more frequent than intraspecific aggression for juveniles of the coral-obligate P. moluccensis. This study highlights the importance of coral composition as a determinant of behaviour and diversity of coral-reef fishes.

  2. Effects of ocean acidification on the potency of macroalgal allelopathy to a common coral.

    PubMed

    Del Monaco, Carlos; Hay, Mark E; Gartrell, Patrick; Mumby, Peter J; Diaz-Pulido, Guillermo

    2017-02-01

    Many coral reefs have phase shifted from coral to macroalgal dominance. Ocean acidification (OA) due to elevated CO 2 is hypothesised to advantage macroalgae over corals, contributing to these shifts, but the mechanisms affecting coral-macroalgal interactions under OA are unknown. Here, we show that (i) three common macroalgae are more damaging to a common coral when they compete under CO 2 concentrations predicted to occur in 2050 and 2100 than under present-day conditions, (ii) that two macroalgae damage corals via allelopathy, and (iii) that one macroalga is allelopathic under conditions of elevated CO 2 , but not at ambient levels. Lipid-soluble, surface extracts from the macroalga Canistrocarpus (=Dictyota) cervicornis were significantly more damaging to the coral Acropora intermedia growing in the field if these extracts were from thalli grown under elevated vs ambient concentrations of CO 2 . Extracts from the macroalgae Chlorodesmis fastigiata and Amansia glomerata were not more potent when grown under elevated CO 2 . Our results demonstrate increasing OA advantages seaweeds over corals, that algal allelopathy can mediate coral-algal interactions, and that OA may enhance the allelopathy of some macroalgae. Other mechanisms also affect coral-macroalgal interactions under OA, and OA further suppresses the resilience of coral reefs suffering blooms of macroalgae.

  3. Effects of ocean acidification on the potency of macroalgal allelopathy to a common coral

    NASA Astrophysics Data System (ADS)

    Del Monaco, Carlos; Hay, Mark E.; Gartrell, Patrick; Mumby, Peter J.; Diaz-Pulido, Guillermo

    2017-02-01

    Many coral reefs have phase shifted from coral to macroalgal dominance. Ocean acidification (OA) due to elevated CO2 is hypothesised to advantage macroalgae over corals, contributing to these shifts, but the mechanisms affecting coral-macroalgal interactions under OA are unknown. Here, we show that (i) three common macroalgae are more damaging to a common coral when they compete under CO2 concentrations predicted to occur in 2050 and 2100 than under present-day conditions, (ii) that two macroalgae damage corals via allelopathy, and (iii) that one macroalga is allelopathic under conditions of elevated CO2, but not at ambient levels. Lipid-soluble, surface extracts from the macroalga Canistrocarpus (=Dictyota) cervicornis were significantly more damaging to the coral Acropora intermedia growing in the field if these extracts were from thalli grown under elevated vs ambient concentrations of CO2. Extracts from the macroalgae Chlorodesmis fastigiata and Amansia glomerata were not more potent when grown under elevated CO2. Our results demonstrate increasing OA advantages seaweeds over corals, that algal allelopathy can mediate coral-algal interactions, and that OA may enhance the allelopathy of some macroalgae. Other mechanisms also affect coral-macroalgal interactions under OA, and OA further suppresses the resilience of coral reefs suffering blooms of macroalgae.

  4. Seasonal changes in bacterial communities associated with healthy and diseased Porites coral in southern Taiwan.

    PubMed

    Lin, Chorng-Horng; Chuang, Chih-Hsiang; Twan, Wen-Hung; Chiou, Shu-Fen; Wong, Tit-Yee; Liu, Jong-Kang; Kao, Chyuan-Yao; Kuo, Jimmy

    2016-12-01

    We compared the bacterial communities associated with healthy scleractinian coral Porites sp. with those associated with coral infected with pink spot syndrome harvested during summer and winter from waters off the coast of southern Taiwan. Members of the bacterial community associated with the coral were characterized by means of denaturing gradient gel electrophoresis (DGGE) of a short region of the 16S rRNA gene and clone library analysis. Of 5 different areas of the 16S rRNA gene, we demonstrated that the V3 hypervariable region is most suited to represent the coral-associated bacterial community. The DNA sequences of 26 distinct bands extracted from DGGE gels and 269 sequences of the 16S rRNA gene from clone libraries were determined. We found that the communities present in diseased coral were more heterogeneous than the bacterial communities of uninfected coral. In addition, bacterial communities associated with coral harvested in the summer were more diverse than those associated with coral collected in winter, regardless of the health status of the coral. Our study suggested that the compositions of coral-associated bacteria communities are complex, and the population of bacteria varies greatly between seasons and in coral of differing health status.

  5. Effects of reduced dissolved oxygen concentrations on physiology and fluorescence of hermatypic corals and benthic algae

    PubMed Central

    Smith, Jennifer E.; Thompson, Melissa

    2014-01-01

    While shifts from coral to seaweed dominance have become increasingly common on coral reefs and factors triggering these shifts successively identified, the primary mechanisms involved in coral-algae interactions remain unclear. Amongst various potential mechanisms, algal exudates can mediate increases in microbial activity, leading to localized hypoxic conditions which may cause coral mortality in the direct vicinity. Most of the processes likely causing such algal exudate induced coral mortality have been quantified (e.g., labile organic matter release, increased microbial metabolism, decreased dissolved oxygen availability), yet little is known about how reduced dissolved oxygen concentrations affect competitive dynamics between seaweeds and corals. The goals of this study were to investigate the effects of different levels of oxygen including hypoxic conditions on a common hermatypic coral Acropora yongei and the common green alga Bryopsis pennata. Specifically, we examined how photosynthetic oxygen production, dark and daylight adapted quantum yield, intensity and anatomical distribution of the coral innate fluorescence, and visual estimates of health varied with differing background oxygen conditions. Our results showed that the algae were significantly more tolerant to extremely low oxygen concentrations (2–4 mg L−1) than corals. Furthermore corals could tolerate reduced oxygen concentrations, but only until a given threshold determined by a combination of exposure time and concentration. Exceeding this threshold led to rapid loss of coral tissue and mortality. This study concludes that hypoxia may indeed play a significant role, or in some cases may even be the main cause, for coral tissue loss during coral-algae interaction processes. PMID:24482757

  6. Effects of reduced dissolved oxygen concentrations on physiology and fluorescence of hermatypic corals and benthic algae.

    PubMed

    Haas, Andreas F; Smith, Jennifer E; Thompson, Melissa; Deheyn, Dimitri D

    2014-01-01

    While shifts from coral to seaweed dominance have become increasingly common on coral reefs and factors triggering these shifts successively identified, the primary mechanisms involved in coral-algae interactions remain unclear. Amongst various potential mechanisms, algal exudates can mediate increases in microbial activity, leading to localized hypoxic conditions which may cause coral mortality in the direct vicinity. Most of the processes likely causing such algal exudate induced coral mortality have been quantified (e.g., labile organic matter release, increased microbial metabolism, decreased dissolved oxygen availability), yet little is known about how reduced dissolved oxygen concentrations affect competitive dynamics between seaweeds and corals. The goals of this study were to investigate the effects of different levels of oxygen including hypoxic conditions on a common hermatypic coral Acropora yongei and the common green alga Bryopsis pennata. Specifically, we examined how photosynthetic oxygen production, dark and daylight adapted quantum yield, intensity and anatomical distribution of the coral innate fluorescence, and visual estimates of health varied with differing background oxygen conditions. Our results showed that the algae were significantly more tolerant to extremely low oxygen concentrations (2-4 mg L(-1)) than corals. Furthermore corals could tolerate reduced oxygen concentrations, but only until a given threshold determined by a combination of exposure time and concentration. Exceeding this threshold led to rapid loss of coral tissue and mortality. This study concludes that hypoxia may indeed play a significant role, or in some cases may even be the main cause, for coral tissue loss during coral-algae interaction processes.

  7. Closing the circle: is it feasible to rehabilitate reefs with sexually propagated corals?

    NASA Astrophysics Data System (ADS)

    Guest, J. R.; Baria, M. V.; Gomez, E. D.; Heyward, A. J.; Edwards, A. J.

    2014-03-01

    Sexual propagation of corals specifically for reef rehabilitation remains largely experimental. In this study, we refined low technology culture and transplantation approaches and assessed the role of colony size and age, at time of transfer from nursery to reef, on subsequent survival. Larvae from Acropora millepora were reared from gametes and settled on engineered substrates, called coral plug-ins, that were designed to simplify transplantation to areas of degraded reef. Plug-ins, with laboratory spawned and settled coral recruits attached, were maintained in nurseries until they were at least 7 months old before being transplanted to replicate coral limestone outcrops within a marine protected area until they were 31 months old. Survival rates of transplanted corals that remained at the protected in situ nursery the longest were 3.9-5.6 times higher than corals transplanted to the reef earlier, demonstrating that an intermediate ocean nursery stage is critical in the sexual propagation of corals for reef rehabilitation. 3 years post-settlement, colonies were reproductively mature, making this one of few published studies to date to rear a broadcasting scleractinian from eggs to spawning adults. While our data show that it is technically feasible to transplant sexually propagated corals and rear them until maturity, producing a single 2.5-year-old coral on the reef cost at least US60. `What if' scenarios indicate that the cost per transplantable coral could be reduced by almost 80 %, nevertheless, it is likely that the high cost per coral using sexual propagation methods would constrain delivery of new corals to relatively small scales in many countries with coral reefs.

  8. Chemotaxis by natural populations of coral reef bacteria.

    PubMed

    Tout, Jessica; Jeffries, Thomas C; Petrou, Katherina; Tyson, Gene W; Webster, Nicole S; Garren, Melissa; Stocker, Roman; Ralph, Peter J; Seymour, Justin R

    2015-08-01

    Corals experience intimate associations with distinct populations of marine microorganisms, but the microbial behaviours underpinning these relationships are poorly understood. There is evidence that chemotaxis is pivotal to the infection process of corals by pathogenic bacteria, but this evidence is limited to experiments using cultured isolates under laboratory conditions. We measured the chemotactic capabilities of natural populations of coral-associated bacteria towards chemicals released by corals and their symbionts, including amino acids, carbohydrates, ammonium and dimethylsulfoniopropionate (DMSP). Laboratory experiments, using a modified capillary assay, and in situ measurements, using a novel microfabricated in situ chemotaxis assay, were employed to quantify the chemotactic responses of natural microbial assemblages on the Great Barrier Reef. Both approaches showed that bacteria associated with the surface of the coral species Pocillopora damicornis and Acropora aspera exhibited significant levels of chemotaxis, particularly towards DMSP and amino acids, and that these levels of chemotaxis were significantly higher than that of bacteria inhabiting nearby, non-coral-associated waters. This pattern was supported by a significantly higher abundance of chemotaxis and motility genes in metagenomes within coral-associated water types. The phylogenetic composition of the coral-associated chemotactic microorganisms, determined using 16S rRNA amplicon pyrosequencing, differed from the community in the seawater surrounding the coral and comprised known coral associates, including potentially pathogenic Vibrio species. These findings indicate that motility and chemotaxis are prevalent phenotypes among coral-associated bacteria, and we propose that chemotaxis has an important role in the establishment and maintenance of specific coral-microbe associations, which may ultimately influence the health and stability of the coral holobiont.

  9. The Effects of Nutrient Enrichment and Herbivore Abundance on the Ability of Turf Algae to Overgrow Coral in the Caribbean

    PubMed Central

    Vermeij, Mark J. A.; van Moorselaar, Imke; Engelhard, Sarah; Hörnlein, Christine; Vonk, Sophie M.; Visser, Petra M.

    2010-01-01

    Turf algae are multispecies communities of small marine macrophytes that are becoming a dominant component of coral reef communities around the world. To assess the impact of turf algae on corals, we investigated the effects of increased nutrients (eutrophication) on the interaction between the Caribbean coral Montastraea annularis and turf algae at their growth boundary. We also assessed whether herbivores are capable of reducing the abundance of turf algae at coral-algae boundaries. We found that turf algae cause visible (overgrowth) and invisible negative effects (reduced fitness) on neighbouring corals. Corals can overgrow neighbouring turf algae very slowly (at a rate of 0.12 mm 3 wk−1) at ambient nutrient concentrations, but turf algae overgrew corals (at a rate of 0.34 mm 3 wk−1) when nutrients were experimentally increased. Exclusion of herbivores had no measurable effect on the rate turf algae overgrew corals. We also used PAM fluorometry (a common approach for measuring of a colony's “fitness”) to detect the effects of turf algae on the photophysiology of neighboring corals. Turf algae always reduced the effective photochemical efficiency of neighbouring corals, regardless of nutrient and/or herbivore conditions. The findings that herbivores are not capable of controlling the abundance of turf algae and that nutrient enrichment gives turf algae an overall competitive advantage over corals together have serious implications for the health of Caribbean coral reef systems. At ambient nutrient levels, traditional conservation measures aimed at reversing coral-to-algae phase shifts by reducing algal abundance (i.e., increasing herbivore populations by establishing Marine Protected Areas or tightening fishing regulations) will not necessarily reduce the negative impact of turf algae on local coral communities. Because turf algae have become the most abundant benthic group on Curaçao (and likely elsewhere in the Caribbean), new conservation strategies are required to mitigate their negative impact on coral communities. PMID:21179215

  10. Recovery of coral cover in records spanning 44 yr for reefs in Kāne`ohe Bay, Oa`hu, Hawai`i

    NASA Astrophysics Data System (ADS)

    Stimson, John

    2018-03-01

    Published and unpublished long-term studies are assembled to examine trends in coral cover and the dependence of change in coral cover on the initial coral cover in Kāne`ohe Bay over the last 44 yr. Each study showed there had been periods of increase in coral cover in the bay and showed that the rate of change in cover has been inversely dependent on the initial cover at a site. When coral cover is high on upper reef slopes, the fragile structure of reefs in this sheltered bay often collapses, resulting in a decrease in coral cover. The rate of change in coral cover was also inversely dependent on cover in one of the two studies that included analysis of reef-flat corals; the cause of decrease in cover in this habitat is thought to be attributable to particularly low sea levels in Hawai`i in the late 1990s and 2009-2010. The inverse relationship between initial coral cover and change in cover, and the intersections of the regression lines of these variables with the x-axis at intermediate values of coral cover, is indicative of resilience in this ecosystem over the last 44 yr. In the 1970s, the invasive macroscopic green alga Dictyosphaeria cavernosa covered a high percentage of coral habitat and commonly displaced corals from the reef slope and outer reef flats; the change was cited as an example of a phase shift on a reef. This alga has virtually disappeared from the bay, thus increasing the space available to corals; its disappearance is coincident with the increase in coral cover. Other species of macroalgae, including alien species, have not replaced D. cavernosa as major space competitors. The increase in coral cover and virtual disappearance of D. cavernosa constitute an example of a phase-shift reversal.

  11. 50 CFR 665.169 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Gold coral harvest moratorium. 665.169... Fisheries § 665.169 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  12. 50 CFR 665.169 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Gold coral harvest moratorium. 665.169... Fisheries § 665.169 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  13. 50 CFR 665.469 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Gold coral harvest moratorium. 665.469... Archipelago Fisheries § 665.469 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  14. 50 CFR 665.270 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Gold coral harvest moratorium. 665.270... Fisheries § 665.270 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  15. 50 CFR 665.169 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Gold coral harvest moratorium. 665.169... Fisheries § 665.169 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  16. 50 CFR 665.469 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Gold coral harvest moratorium. 665.469... Archipelago Fisheries § 665.469 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  17. 50 CFR 665.270 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Gold coral harvest moratorium. 665.270... Fisheries § 665.270 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  18. 50 CFR 665.469 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Gold coral harvest moratorium. 665.469... Archipelago Fisheries § 665.469 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  19. 50 CFR 665.270 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Gold coral harvest moratorium. 665.270... Fisheries § 665.270 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  20. Carbon and nitrogen isotopic analysis of coral-associated nitrogen in rugose corals of the Middle Devonian, implications for paleoecology and paleoceanography.

    NASA Astrophysics Data System (ADS)

    Hickey, A. N.; Junium, C. K.; Uveges, B. T.; Ivany, L. C.; Martindale, R. C.

    2017-12-01

    The Middle Devonian Appalachian Basin of Central New York hosts an extraordinary diversity of well-studied fossil invertebrates within the shallow marine sequences of the Givetian Age, Hamilton Group. Of particular interest are a series of aerially expansive coral beds with diverse assemblages of rugose corals. These well-preserved specimens provide an excellent opportunity to test the feasibility of δ15N and δ13C analyses in rugose corals in an effort to resolve outstanding issues regarding their paleoecology and ontogeny as well environmental dynamics within the Devonian Appalachian Basin. Here we present carbon and nitrogen isotope analyses of the rugose corals Heliophyllum and Siphonophrentis from the Joshua Coral Bed. Corals were cleaned of the host calcareous shale and sonicated sequentially in deionized water and methanol, and then oxidatively cleaned. Cleaned corals were sectioned into 0.5cm billets to obtain enough residual organic material for analysis. The organic content of the corals is low, but nanoEA allows for serial sampling of 5-10 samples per coral. Coral sections were decarbonated and the residual organic material is filtered and dried prior to analysis. Coral organic matter is analyzed in triplicate using nanoEA, which is a cryo-trapping, capillary focusing technique for δ15N and δ13C. The δ15N of organic matter extracted from rugose corals is, on average, enriched by 2-4‰ relative to the bulk nitrogen in the host rock. As well, the δ13C of organic carbon from the corals is 13C-enriched relative to the bulk rock, but to a lesser degree (no more than 1.5‰). Assuming that the bulk rock carbon and nitrogen are largely representative of the long-term primary production background, the modest enrichment is consistent with a trophic effect, and that rugose corals are likely planktivores. In an individual coral, δ15N ranges by 3-4‰ over its length, and when adjusted for trophic enrichment varies around the average δ15N of bulk sedimentary organic matter (+2.0‰). There is no apparent trajectory in the isotopic composition of organic matter, which suggests that over the sampled life history of the corals we cannot resolve any ontogenetic trends. Therefore, the variability in the δ15N of the coral organic matter likely reflects short-term variability in basinal conditions or changes in coral food supply.

  1. 76 FR 20957 - Gulf of Mexico Fishery Management Council; Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-14

    ... Mexico Fishery Management Council's Red Drum, Reef Fish, Shrimp, Coral and Coral Reefs, and Stony Crab... Mexico Fishery Management Council's Red Drum, Reef Fish, Shrimp, Coral and Coral Reefs, and Stone Crab... to protect threatened staghorn and elkhorn corals, and requirements for gear marking of all spiny...

  2. 76 FR 16618 - Western Pacific Fishery Management Council; Public Meetings

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-03-24

    ... Programs and Research Projects A. Coral Reef Fisheries B. Crustacean Fisheries C. Precious Coral Fisheries... Offshore Aquaculture 7. Coral Reef Funded Projects A. Kona Crab Stock Assessment B. Black Coral Mapping C. Deepwater Chorusing Phenomenon D. Report on Tournament Sampling E. Upcoming Coral Reef Projects Schedule and...

  3. 78 FR 66683 - Fisheries in the Western Pacific; Special Coral Reef Ecosystem Fishing Permit

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-06

    ... the Western Pacific; Special Coral Reef Ecosystem Fishing Permit AGENCY: National Marine Fisheries... special coral reef ecosystem fishing permit. SUMMARY: NMFS issued a Special Coral Reef Ecosystem Fishing Permit that authorizes Kampachi Farms, LLC, to culture and harvest a coral reef ecosystem management unit...

  4. 76 FR 63904 - Proposed Information Collection; Comment Request; Coral Reef Conservation Program Administration

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-14

    ... Collection; Comment Request; Coral Reef Conservation Program Administration AGENCY: National Oceanic and... The Coral Reef Conservation Act of 2000 (Act) was enacted to provide a framework for conserving coral reefs. The Coral Reef Conservation Grant Program, under the Act, provides funds to broad- based...

  5. 50 CFR 665.161 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Definitions. As used in §§ 665.160 through 665.169: American Samoa precious coral management unit species (American Samoa precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Local name English common name Scientific name Amu piniki-mumu Pink coral (also known...

  6. 50 CFR 665.161 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Definitions. As used in §§ 665.160 through 665.169: American Samoa precious coral management unit species (American Samoa precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Local name English common name Scientific name Amu piniki-mumu Pink coral (also known...

  7. 50 CFR 665.669 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Gold coral harvest moratorium. 665.669... Island Area Fisheries § 665.669 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  8. 50 CFR 665.161 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Definitions. As used in §§ 665.160 through 665.169: American Samoa precious coral management unit species (American Samoa precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Local name Englishcommon name Scientific name Amu piniki-mumu Pink coral (also known as...

  9. 50 CFR 665.669 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Gold coral harvest moratorium. 665.669... Island Area Fisheries § 665.669 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  10. 50 CFR 665.161 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Definitions. As used in §§ 665.160 through 665.169: American Samoa precious coral management unit species (American Samoa precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Local name Englishcommon name Scientific name Amu piniki-mumu Pink coral (also known as...

  11. 50 CFR 665.669 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Gold coral harvest moratorium. 665.669... Island Area Fisheries § 665.669 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2013. ...

  12. 50 CFR 665.161 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Definitions. As used in §§ 665.160 through 665.169: American Samoa precious coral management unit species (American Samoa precious coral MUS) means any coral of the genus Corallium in addition to the following species of corals: Local name Englishcommon name Scientific name Amu piniki-mumu Pink coral (also known as...

  13. De novo metatranscriptome assembly and coral gene expression profile of Montipora capitata with growth anomaly

    USDA-ARS?s Scientific Manuscript database

    Background Scleractinian corals are a vital component of coral reef ecosystems, and of significant cultural and economic value worldwide. As anthropogenic and natural stressors are contributing to a global decline of coral reefs, understanding coral health is critical to help preserve these ecosyste...

  14. Agents of coral mortality on reef formations of the Colombian Pacific.

    PubMed

    Navas-Camacho, Raúl; Rodríguez-Ramírez, Alberto; Reyes-Nivia, María Catalina

    2010-05-01

    The National Monitoring System for Coral Reefs of Colombia (SIMAC) monitors the impact of some of the most important agents of coral tissue loss (bleaching and/or disease) in the Colombian Pacific coral formations since 1998. Physiological bleaching is among the main results of stress in the area. Signs of coral diseases resembling bacterial bleaching such as White Plague and White Band, were observed in Malpelo and Gorgona islands. Damage to the Pacific gorgonian Pacifigorgia spp., similar to those produced by Aspergillosis in Caribbean corals, was detected in Utria Bay. The presence of tumors in colonies of massive corals was also recorded. Even though coral diseases are globally widespread, their occurrence in American Pacific reefs has been poorly documented to date.

  15. Improved zircon iron corals for the 1990s

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Decker, C.

    1992-03-01

    CIBA-GEIGY/Drakenfeld Colors is dedicated to the research and development of consistent and cost-effective ceramic stains for the whitewares industry. After identifying the trends in color for the 1990s. CIBA-GEIGY/Drakenfeld Colors initiated an extensive R D project to improve zircon ion corals for the whitewares industry. These color trends indicated a need for stronger and cleaner zircon iron corals. This paper discusses the chemistry and crystal structure of zircon iron corals. A historical review of Drakenfeld corals will also be presented. The most recent development in Drakenfeld corals will then be compared to other commercially available zircon iron corals. Taking intomore » consideration these comparisons, conclusions will be drawn suggesting the coral of choice for the 1990s.« less

  16. Dietary shift in juvenile coral trout ( Plectropomus maculatus) following coral reef degradation from a flood plume disturbance

    NASA Astrophysics Data System (ADS)

    Wen, Colin K. C.; Bonin, Mary C.; Harrison, Hugo B.; Williamson, David H.; Jones, Geoffrey P.

    2016-06-01

    Acute environmental disturbances impact on habitat quality and resource availability, which can reverberate through trophic levels and become apparent in species' dietary composition. In this study, we observed a distinct dietary shift of newly settled and juvenile coral trout ( Plectropomus maculatus) following severe coral reef habitat degradation after a river flood plume affected the Keppel Islands, Australia. Hard coral cover declined by ~28 % in the 2 yr following the 2010-2011 floods, as did the abundance of young coral trout. Gut contents analysis revealed that diets had shifted from largely crustacean-based to non-preferred prey fishes following the disturbances. These results suggest that newly settled and juvenile coral trout modify their diet and foraging strategy in response to coral habitat degradation. This bottom-up effect of habitat degradation on the diet of a top coral reef predator may incur a metabolic cost, with subsequent effects on growth and survival.

  17. Symbiont diversity may help coral reefs survive moderate climate change.

    PubMed

    Baskett, Marissa L; Gaines, Steven D; Nisbet, Roger M

    2009-01-01

    Given climate change, thermal stress-related mass coral-bleaching events present one of the greatest anthropogenic threats to coral reefs. While corals and their symbiotic algae may respond to future temperatures through genetic adaptation and shifts in community compositions, the climate may change too rapidly for coral response. To test this potential for response, here we develop a model of coral and symbiont ecological dynamics and symbiont evolutionary dynamics. Model results without variation in symbiont thermal tolerance predict coral reef collapse within decades under multiple future climate scenarios, consistent with previous threshold-based predictions. However, model results with genetic or community-level variation in symbiont thermal tolerance can predict coral reef persistence into the next century, provided low enough greenhouse gas emissions occur. Therefore, the level of greenhouse gas emissions will have a significant effect on the future of coral reefs, and accounting for biodiversity and biological dynamics is vital to estimating the size of this effect.

  18. Recurrent disturbances, recovery trajectories, and resilience of coral assemblages on a South Central Pacific reef

    NASA Astrophysics Data System (ADS)

    Adjeroud, M.; Michonneau, F.; Edmunds, P. J.; Chancerelle, Y.; de Loma, T. Lison; Penin, L.; Thibaut, L.; Vidal-Dupiol, J.; Salvat, B.; Galzin, R.

    2009-09-01

    Coral reefs are increasingly threatened by various disturbances, and a critical challenge is to determine their ability for resistance and resilience. Coral assemblages in Moorea, French Polynesia, have been impacted by multiple disturbances (one cyclone and four bleaching events between 1991 and 2006). The 1991 disturbances caused large declines in coral cover (~51% to ~22%), and subsequent colonization by turf algae (~16% to ~49%), but this phase-shift from coral to algal dominance has not persisted. Instead, the composition of the coral community changed following the disturbances, notably favoring an increased cover of Porites, reduced cover of Montipora and Pocillopora, and a full return of Acropora; in this form, the reef returned to pre-disturbance coral cover within a decade. Thus, this coral assemblage is characterized by resilience in terms of coral cover, but plasticity in terms of community composition.

  19. Improved water quality can ameliorate effects of climate change on corals.

    PubMed

    Wooldridge, Scott A; Done, Terence J

    2009-09-01

    The threats of wide-scale coral bleaching and reef demise associated with anthropogenic climate change are widely known. Moreover, rates of genetic adaptation and/or changes in the coral-zooxanthella partnerships are considered unlikely to be sufficiently fast for corals to acquire increased physiological resistance to increasing sea temperatures and declining pH. However, it has been suggested that coral reef resilience to climate change may be improved by good local management of coral reefs, including management of water quality. Here, using major data sets from the Great Barrier Reef (GBR), Australia, we investigate geographic patterns of coral bleaching in 1998 and 2002 and outline a synergism between heat stress and nutrient flux as a major causative mechanism for those patterns. The study provides the first concrete evidence for the oft-expressed belief that improved coral reef management will increase the regional-scale survival prospects of coral reefs to global climate change.

  20. A Water Tank Study of the Effects of Seawater Temperature on Coral Metabolism and Changes in Chemical Compositions in Seawater

    NASA Astrophysics Data System (ADS)

    Fujimura, H.; Arakaki, T.; Hamdun, A. M.; Oomori, T.

    2002-12-01

    For the past several years, large-scale coral bleaching has been observed in many coral reef areas around the world. Coral bleaching is considered to be caused mainly by high seawater temperature together with other factors such as strong UV-light and changes in salinity. However, the mechanism of coral bleaching is not clearly understood. We have conducted experiments using water tanks under well-controlled light and temperature conditions to elucidate the effects of seawater temperature on coral_fs metabolism and changes in chemical compositions in the seawater around the coral. Metabolism of coral was studied by analyzing changes in seawater chemical compositions. Coral specimen used in our experiment, Goniastrea aspera, was collected from northern shore of Okinawa island, Japan. pH, nitrate ion, dissolved organic carbon, and alkalinity were measured. Photochemically formed hydroxyl radical was also studied in those seawater samples.

  1. Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems.

    PubMed

    Bourne, David G; Morrow, Kathleen M; Webster, Nicole S

    2016-09-08

    Corals are fundamental ecosystem engineers, creating large, intricate reefs that support diverse and abundant marine life. At the core of a healthy coral animal is a dynamic relationship with microorganisms, including a mutually beneficial symbiosis with photosynthetic dinoflagellates (Symbiodinium spp.) and enduring partnerships with an array of bacterial, archaeal, fungal, protistan, and viral associates, collectively termed the coral holobiont. The combined genomes of this coral holobiont form a coral hologenome, and genomic interactions within the hologenome ultimately define the coral phenotype. Here we integrate contemporary scientific knowledge regarding the ecological, host-specific, and environmental forces shaping the diversity, specificity, and distribution of microbial symbionts within the coral holobiont, explore physiological pathways that contribute to holobiont fitness, and describe potential mechanisms for holobiont homeostasis. Understanding the role of the microbiome in coral resilience, acclimation, and environmental adaptation is a new frontier in reef science that will require large-scale collaborative research efforts.

  2. The differential effects of increasing frequency and magnitude of extreme events on coral populations.

    PubMed

    Fabina, Nicholas S; Baskett, Marissa L; Gross, Kevin

    2015-09-01

    Extreme events, which have profound ecological consequences, are changing in both frequency and magnitude with climate change. Because extreme temperatures induce coral bleaching, we can explore the relative impacts of changes in frequency and magnitude of high temperature events on coral reefs. Here, we combined climate projections and a dynamic population model to determine how changing bleaching regimes influence coral persistence. We additionally explored how coral traits and competition with macroalgae mediate changes in bleaching regimes. Our results predict that severe bleaching events reduce coral persistence more than frequent bleaching. Corals with low adult mortality and high growth rates are successful when bleaching is mild, but bleaching resistance is necessary to persist when bleaching is severe, regardless of frequency. The existence of macroalgae-dominated stable states reduces coral persistence and changes the relative importance of coral traits. Building on previous studies, our results predict that management efforts may need to prioritize protection of "weaker" corals with high adult mortality when bleaching is mild, and protection of "stronger" corals with high bleaching resistance when bleaching is severe. In summary, future reef projections and conservation targets depend on both local bleaching regimes and biodiversity.

  3. Primary production of coral ecosystems in the Vietnamese coastal and adjacent marine waters

    NASA Astrophysics Data System (ADS)

    Tac-An, Nguyen; Minh-Thu, Phan; Cherbadji, I. I.; Propp, M. V.; Odintsov, V. S.; Propp, L. H.

    2013-11-01

    Coral reef ecosystems in coastal waters and islands of Vietnam have high primary production. Average gross primary production (GPP) in coral reef waters was 0.39 g C m-2 day-1. GPP of corals ranged from 3.12 to 4.37 g C m-2 day-1. GPP of benthic microalgae in coral reefs ranged from 2 to 10 g C m-2 day-1. GPP of macro-algae was 2.34 g C m-2 day-1. Therefore, the total of GPP of whole coral reef ecosystems could reach 7.85 to 17.10 g C m-2 day-1. Almost all values of the ratio of photosynthesis to respiration in the water bodies are higher than 1, which means these regions are autotrophic systems. Wire variation of GPP in coral reefs was contributed by species abundance of coral and organisms, nutrient supports and environmental characteristics of coral ecosystems. Coral reefs play an important ecological role of biogeochemical cycling of nutrients in waters around the reefs. These results contribute valuable information for the protection, conservation and sustainable exploitation of the natural resources in coral reef ecosystems in Vietnam.

  4. Tenacious D: Symbiodinium in clade D remain in reef corals at both high and low temperature extremes despite impairment.

    PubMed

    Silverstein, Rachel N; Cunning, Ross; Baker, Andrew C

    2017-04-01

    Reef corals are sensitive to thermal stress, which induces coral bleaching (the loss of algal symbionts), often leading to coral mortality. However, corals hosting certain symbionts (notably some members of Symbiodinium clade D) resist bleaching when exposed to high temperatures. To determine whether these symbionts are also cold tolerant, we exposed corals hosting either Symbiodinium C3 or D1a to incremental warming (+1°C week -1 to 35°C) and cooling (-1°C week -1 to 15°C), and measured photodamage and symbiont loss. During warming to 33°C, C3 corals were photodamaged and lost >99% of symbionts, while D1a corals experienced photodamage but did not bleach. During cooling, D1a corals suffered more photodamage than C3 corals but still did not bleach, while C3 corals lost 94% of symbionts. These results indicate that photodamage does not always lead to bleaching, suggesting alternate mechanisms exist by which symbionts resist bleaching, and helping explain the persistence of D1a symbionts on recently bleached reefs, with implications for the future of these ecosystems. © 2017. Published by The Company of Biologists Ltd.

  5. Density-associated recruitment mediates coral population dynamics on a coral reef

    NASA Astrophysics Data System (ADS)

    Bramanti, Lorenzo; Edmunds, Peter J.

    2016-06-01

    Theory suggests that density-associated processes can modulate community resilience following declines in population size. Here, we demonstrate density-associated processes in two scleractinian populations on the outer reef of Moorea, French Polynesia, that are rapidly increasing in size following the effects of two catastrophic disturbances. Between 2006 and 2010, predation by the corallivorous crown-of-thorns sea star reduced coral cover by 93 %; in 2010, the dead coral skeletons were removed by a cyclone, and in 2011 and 2012, high coral recruitment initiated population recovery. Coral recruitment was associated with coral cover, but the relationship differed between two coral genera that are almost exclusively broadcast spawners in Moorea. Acroporids recruited at low densities, and the density of recruits was positively associated with cover of Acropora, whereas pocilloporids recruited at high densities, and densities of their recruits were negatively associated with cover of Pocillopora. Together, our results suggest that associations between adult cover and density of both juveniles and recruits can mediate rapid coral community recovery after large disturbances. The difference between taxa in sign of the relationships between recruit density and coral cover indicate that they reflect contrasting mechanisms with the potential to mediate temporal shifts in taxonomic composition of coral communities.

  6. Evidence of host-associated divergence from coral-eating snails (genus Coralliophila) in the Coral Triangle

    NASA Astrophysics Data System (ADS)

    Simmonds, Sara E.; Chou, Vincent; Cheng, Samantha H.; Rachmawati, Rita; Calumpong, Hilconida P.; Ngurah Mahardika, G.; Barber, Paul H.

    2018-06-01

    We studied how host-associations and geography shape the genetic structure of sister species of marine snails Coralliophila radula (A. Adams, 1853) and C. violacea (Kiener, 1836). These obligate ectoparasites prey upon corals and are sympatric throughout much of their ranges in coral reefs of the tropical and subtropical Indo-Pacific. We tested for population genetic structure of snails in relation to geography and their host corals using mtDNA (COI) sequences in minimum spanning trees and AMOVAs. We also examined the evolutionary relationships of their Porites host coral species using maximum likelihood trees of RAD-seq (restriction site-associated DNA sequencing) loci mapped to a reference transcriptome. A maximum likelihood tree of host corals revealed three distinct clades. Coralliophila radula showed a pronounced genetic break across the Sunda Shelf ( Φ CT = 0.735) but exhibited no genetic structure with respect to host. C. violacea exhibited significant geographic structure ( Φ CT = 0.427), with divergence among Hawaiian populations, the Coral Triangle and the Indian Ocean. Notably, C. violacea showed evidence of ecological divergence; two lineages were associated with different groups of host coral species, one widespread found at all sites, and the other restricted to the Coral Triangle. Sympatric populations of C. violacea found on different suites of coral species were highly divergent ( Φ CT = 0.561, d = 5.13%), suggesting that symbiotic relationships may contribute to lineage diversification in the Coral Triangle.

  7. High-resolution modeling of thermal thresholds and environmental influences on coral bleaching for local and regional reef management.

    PubMed

    Kumagai, Naoki H; Yamano, Hiroya

    2018-01-01

    Coral reefs are one of the world's most threatened ecosystems, with global and local stressors contributing to their decline. Excessive sea-surface temperatures (SSTs) can cause coral bleaching, resulting in coral death and decreases in coral cover. A SST threshold of 1 °C over the climatological maximum is widely used to predict coral bleaching. In this study, we refined thermal indices predicting coral bleaching at high-spatial resolution (1 km) by statistically optimizing thermal thresholds, as well as considering other environmental influences on bleaching such as ultraviolet (UV) radiation, water turbidity, and cooling effects. We used a coral bleaching dataset derived from the web-based monitoring system Sango Map Project, at scales appropriate for the local and regional conservation of Japanese coral reefs. We recorded coral bleaching events in the years 2004-2016 in Japan. We revealed the influence of multiple factors on the ability to predict coral bleaching, including selection of thermal indices, statistical optimization of thermal thresholds, quantification of multiple environmental influences, and use of multiple modeling methods (generalized linear models and random forests). After optimization, differences in predictive ability among thermal indices were negligible. Thermal index, UV radiation, water turbidity, and cooling effects were important predictors of the occurrence of coral bleaching. Predictions based on the best model revealed that coral reefs in Japan have experienced recent and widespread bleaching. A practical method to reduce bleaching frequency by screening UV radiation was also demonstrated in this paper.

  8. Does body type really matter? Relating climate change, coral morphology and resiliency

    NASA Astrophysics Data System (ADS)

    Camp, M.; Shein, K. A.; Foster, K.; Hendee, J. C.

    2016-02-01

    Average sea temperatures in many tropical regions are rising approximately 1-2˚C per century, and are thought to be a major driver of increased frequency of coral bleaching. However, certain coral morphologies appear to be more resilient to changes in the environment, particularly to sea temperature variations resulting from global climate change. Although branching corals (e.g., Acropora cervicornis, A. palmata) are highly susceptible to coral bleaching, this morphology is commonly used in coral restoration efforts because of its fast growth rate. Massive corals show higher resistance and resilience to elevated temperature events than branching species, but are less common in coral nurseries. The objective of this study was to compare coral resilience among morphology types in Little Cayman, a remote tropical island with <200 inhabitants where it is possible to decouple environmental and anthropogenic stressors. Three morphological groups (branching, intermediary and massive) were surveyed at 17 sites to estimate the percent cover of each group. Temperature profiles were observed at six moorings around the island, allowing for direct comparison between sea surface temperature, sea temperature at the reef depths, and coral cover, per morphology. The relationship between coral morphological coverage and temperature variation at depth was assessed in the context of geographic variation around the island. Understanding the relationship between coral morphology and resilience to temperature variability will enhance current coral restoration practices by identifying which morphologies have the highest chance of long-term survivorship following outplanting, concurrently optimizing cumulative reef survivorship.

  9. Low coral cover in a high-CO2 world

    NASA Astrophysics Data System (ADS)

    Hoegh-Guldberg, Ove

    2005-09-01

    Coral reefs generally exist within a relatively narrow band of temperatures, light, and seawater aragonite saturation states. The growth of coral reefs is minimal or nonexistent outside this envelope. Climate change, through its effect on ocean temperature, has already had an impact on the world's coral reefs, with almost 30% of corals having disappeared since the beginning of the 1980s. Abnormally warm temperatures cause corals to bleach (lose their brown dinoflagellate symbionts) and, if elevated for long enough, to die. Increasing atmospheric CO2 is also potentially affecting coral reefs by lowering the aragonite saturation state of seawater, making carbonate ions less available for calcification. The synergistic interaction of elevated temperature and CO2 is likely to produce major changes to coral reefs over the next few decades and centuries. Known tolerances of corals to projected changes to sea temperatures indicate that corals are unlikely to remain abundant on reefs and could be rare by the middle of this century if the atmospheric CO2 concentration doubles or triples. The combination of changes to sea temperature and carbonate ion availability could trigger large-scale changes in the biodiversity and function of coral reefs. The ramifications of these changes for the hundred of millions of coral reef-dependent people and industries living in a high-CO2 world have yet to be properly defined. The weight of evidence suggests, however, that projected changes will cause major shifts in the prospects for industries and societies that depend on having healthy coral reefs along their coastlines.

  10. How will coral reef fish communities respond to climate-driven disturbances? Insight from landscape-scale perturbations.

    PubMed

    Adam, Thomas C; Brooks, Andrew J; Holbrook, Sally J; Schmitt, Russell J; Washburn, Libe; Bernardi, Giacomo

    2014-09-01

    Global climate change is rapidly altering disturbance regimes in many ecosystems including coral reefs, yet the long-term impacts of these changes on ecosystem structure and function are difficult to predict. A major ecosystem service provided by coral reefs is the provisioning of physical habitat for other organisms, and consequently, many of the effects of climate change on coral reefs will be mediated by their impacts on habitat structure. Therefore, there is an urgent need to understand the independent and combined effects of coral mortality and loss of physical habitat on reef-associated biota. Here, we use a unique series of events affecting the coral reefs around the Pacific island of Moorea, French Polynesia to differentiate between the impacts of coral mortality and the degradation of physical habitat on the structure of reef fish communities. We found that, by removing large amounts of physical habitat, a tropical cyclone had larger impacts on reef fish communities than an outbreak of coral-eating sea stars that caused widespread coral mortality but left the physical structure intact. In addition, the impacts of declining structural complexity on reef fish assemblages accelerated as structure became increasingly rare. Structure provided by dead coral colonies can take up to decades to erode following coral mortality, and, consequently, our results suggest that predictions based on short-term studies are likely to grossly underestimate the long-term impacts of coral decline on reef fish communities.

  11. Light gradients and optical microniches in coral tissues.

    PubMed

    Wangpraseurt, Daniel; Larkum, Anthony W D; Ralph, Peter J; Kühl, Michael

    2012-01-01

    Light quantity and quality are among the most important factors determining the physiology and stress response of zooxanthellate corals. Yet, almost nothing is known about the light field that Symbiodinium experiences within their coral host, and the basic optical properties of coral tissue are unknown. We used scalar irradiance microprobes to characterize vertical and lateral light gradients within and across tissues of several coral species. Our results revealed the presence of steep light gradients with photosynthetically available radiation decreasing by about one order of magnitude from the tissue surface to the coral skeleton. Surface scalar irradiance was consistently higher over polyp tissue than over coenosarc tissue in faviid corals. Coral bleaching increased surface scalar irradiance by ~150% (between 500 and 700 nm) relative to a healthy coral. Photosynthesis peaked around 300 μm within the tissue, which corresponded to a zone exhibiting strongest depletion of scalar irradiance. Deeper coral tissue layers, e.g., ~1000 μm into aboral polyp tissues, harbor optical microniches, where only ~10% of the incident irradiance remains. We conclude that the optical microenvironment of corals exhibits strong lateral and vertical gradients of scalar irradiance, which are affected by both tissue and skeleton optical properties. Our results imply that zooxanthellae populations inhabit a strongly heterogeneous light environment and highlight the presence of different optical microniches in corals; an important finding for understanding the photobiology, stress response, as well as the phenotypic and genotypic plasticity of coral symbionts.

  12. Light gradients and optical microniches in coral tissues

    PubMed Central

    Wangpraseurt, Daniel; Larkum, Anthony W. D.; Ralph, Peter J.; Kühl, Michael

    2012-01-01

    Light quantity and quality are among the most important factors determining the physiology and stress response of zooxanthellate corals. Yet, almost nothing is known about the light field that Symbiodinium experiences within their coral host, and the basic optical properties of coral tissue are unknown. We used scalar irradiance microprobes to characterize vertical and lateral light gradients within and across tissues of several coral species. Our results revealed the presence of steep light gradients with photosynthetically available radiation decreasing by about one order of magnitude from the tissue surface to the coral skeleton. Surface scalar irradiance was consistently higher over polyp tissue than over coenosarc tissue in faviid corals. Coral bleaching increased surface scalar irradiance by ~150% (between 500 and 700 nm) relative to a healthy coral. Photosynthesis peaked around 300 μm within the tissue, which corresponded to a zone exhibiting strongest depletion of scalar irradiance. Deeper coral tissue layers, e.g., ~1000 μm into aboral polyp tissues, harbor optical microniches, where only ~10% of the incident irradiance remains. We conclude that the optical microenvironment of corals exhibits strong lateral and vertical gradients of scalar irradiance, which are affected by both tissue and skeleton optical properties. Our results imply that zooxanthellae populations inhabit a strongly heterogeneous light environment and highlight the presence of different optical microniches in corals; an important finding for understanding the photobiology, stress response, as well as the phenotypic and genotypic plasticity of coral symbionts. PMID:22969755

  13. High-resolution modeling of thermal thresholds and environmental influences on coral bleaching for local and regional reef management

    PubMed Central

    Yamano, Hiroya

    2018-01-01

    Coral reefs are one of the world’s most threatened ecosystems, with global and local stressors contributing to their decline. Excessive sea-surface temperatures (SSTs) can cause coral bleaching, resulting in coral death and decreases in coral cover. A SST threshold of 1 °C over the climatological maximum is widely used to predict coral bleaching. In this study, we refined thermal indices predicting coral bleaching at high-spatial resolution (1 km) by statistically optimizing thermal thresholds, as well as considering other environmental influences on bleaching such as ultraviolet (UV) radiation, water turbidity, and cooling effects. We used a coral bleaching dataset derived from the web-based monitoring system Sango Map Project, at scales appropriate for the local and regional conservation of Japanese coral reefs. We recorded coral bleaching events in the years 2004–2016 in Japan. We revealed the influence of multiple factors on the ability to predict coral bleaching, including selection of thermal indices, statistical optimization of thermal thresholds, quantification of multiple environmental influences, and use of multiple modeling methods (generalized linear models and random forests). After optimization, differences in predictive ability among thermal indices were negligible. Thermal index, UV radiation, water turbidity, and cooling effects were important predictors of the occurrence of coral bleaching. Predictions based on the best model revealed that coral reefs in Japan have experienced recent and widespread bleaching. A practical method to reduce bleaching frequency by screening UV radiation was also demonstrated in this paper. PMID:29473007

  14. Metagenomic analysis of the microbial community associated with the coral Porites astreoides.

    PubMed

    Wegley, Linda; Edwards, Robert; Rodriguez-Brito, Beltran; Liu, Hong; Rohwer, Forest

    2007-11-01

    The coral holobiont is a dynamic assemblage of the coral animal, zooxanthellae, endolithic algae and fungi, Bacteria,Archaea and viruses. Zooxanthellae and some Bacteria form relatively stable and species-specific associations with corals. Other associations are less specific; coral-associated Archaea differ from those in the water column, but the same archaeal species may be found on different coral species. It has been hypothesized that the coral animal can adapt to differing ecological niches by 'switching' its microbial associates. In the case of corals and zooxanthellae, this has been termed adaptive bleaching and it has important implications for carbon cycling within the coral holobiont and ultimately the survival of coral reefs. However, the roles of other components of the coral holobiont are essentially unknown. To better understand these other coral associates, a fractionation procedure was used to separate the microbes, mitochondria and viruses from the coral animal cells and zooxanthellae. The resulting metagenomic DNA was sequenced using pyrosequencing. Fungi, Bacteria and phage were the most commonly identified organisms in the metagenome. Three of the four fungal phyla were represented, including a wide diversity of fungal genes involved in carbon and nitrogen metabolism, suggesting that the endolithic community is more important than previously appreciated. In particular, the data suggested that endolithic fungi could be converting nitrate and nitrite to ammonia, which would enable fixed nitrogen to cycle within the coral holobiont. The most prominent bacterial groups were Proteobacteria (68%), Firmicutes (10%), Cyanobacteria (7%) and Actinobacteria (6%). Functionally, the bacterial community was primarily heterotrophic and included a number of pathways for the degradation of aromatic compounds, the most abundant being the homogentisate pathway. The most abundant phage family was the ssDNA Microphage and most of the eukaryotic viruses were most closely related to those known to infect aquatic organisms. This study provides a metabolic and taxonomic snapshot of microbes associated with the reef-building coral Porites astreoides and presents a basis for understanding how coral-microbial interactions structure the holobiont and coral reefs.

  15. Epimicrobiota Associated with the Decay and Recovery of Orbicella Corals Exhibiting Dark Spot Syndrome

    PubMed Central

    Meyer, Julie L.; Rodgers, John M.; Dillard, Brian A.; Paul, Valerie J.; Teplitski, Max

    2016-01-01

    Dark Spot Syndrome (DSS) is one of the most common diseases of boulder corals in the Caribbean. It presents as sunken brown lesions in coral tissue, which can spread quickly over coral colonies. With this study, we tested the hypothesis that similar to other coral diseases, DSS is a dysbiosis characterized by global shifts in the coral microbiome. Because Black Band Disease (BBD) was sometimes found following DSS lesions, we also tested the hypothesis that DSS is a precursor of BBD. To track disease initiation and progression 24 coral colonies were tagged. Of them five Orbicella annularis corals and three O. faveolata corals exhibited DSS lesions at tagging. Microbiota of lesions and apparently healthy tissues from DSS-affected corals over the course of 18 months were collected. Final visual assessment showed that five of eight corals incurred substantial tissue loss while two corals remained stable and one appeared to recover from DSS lesions. Illumina sequencing of the V6 region of bacterial 16S rRNA genes demonstrated no significant differences in bacterial community composition associated with healthy tissue or DSS lesions. The epimicrobiomes of both healthy tissue and DSS lesions contained high relative abundances of Operational Taxonomic Units assigned to Halomonas, an unclassified gammaproteobacterial genus, Moritella, an unclassified Rhodobacteraceae genus, Renibacterium, Pseudomonas, and Acinetobacter. The relative abundance of bacterial taxa was not significantly different between samples when grouped by tissue type (healthy tissue vs. DSS lesion), coral species, collection month, or the overall outcome of DSS-affected corals (substantial tissue loss vs. stable/recovered). Two of the tagged corals with substantial tissue loss also developed BBD during the 18-month sampling period. The bacterial community of the BBD layer was distinct from both healthy tissue and DSS lesions, with high relative abundances of the presumed BBD pathogen Roseofilum reptotaenium and an unclassified Bacteroidales genus, similar to previous results. Roseofilum was detected in all samples from this study, with the highest relative abundance in healthy tissue from DSS-affected corals sampled in August, suggesting that while DSS is not a precursor to BBD, DSS-affected corals are in a weakened state and therefore more susceptible to additional infections. PMID:27375605

  16. Quantifying bamboo coral growth rate nonlinearity with the radiocarbon bomb spike: A new model for paleoceanographic chronology development

    NASA Astrophysics Data System (ADS)

    Frenkel, M. M.; LaVigne, M.; Miller, H. R.; Hill, T. M.; McNichol, A.; Gaylord, M. Lardie

    2017-07-01

    Bamboo corals, long-lived cold water gorgonin octocorals, offer unique paleoceanographic archives of the intermediate ocean. These Isididae corals are characterized by alternating gorgonin nodes and high Mg-calcite internodes, which synchronously extend radially. Bamboo coral calcite internodes have been utilized to obtain geochemical proxy data, however, growth rate uncertainty has made it difficult to construct precise chronologies for these corals. Previous studies have relied upon a single tie point from records of the anthropogenic Δ14C bomb spike preserved in the gorgonin nodes of live-collected corals to calculate a mean radial extension rate for the outer 50 years of skeletal growth. Bamboo coral chronologies are typically constructed by applying this mean extension rate to the entire coral record, assuming constant radial extension with coral age. In this study, we aim to test this underlying assumption by analyzing the organic nodes of six California margin bamboo corals at high enough resolution (<0.5 mm) to identify the Δ14C bomb spike, including two tie points at 1957 and 1970, plus the coral collection date (2007.5) for four samples. Radial extension rates between tie points ranged from 10 to 204 μm/year, with a decrease in growth rate evident between the 1957-1970 and 1970-2007.5 periods for all four corals. A negative correlation between growth rate and coral radius (r =-0.7; p=0.04) was determined for multiple bamboo coral taxa and individuals from the California margin, demonstrating a decline in radial extension rate with specimen age and size. To provide a mechanistic basis for these observations, a simple mathematical model was developed based on the assumption of a constant increase in circular cross sectional area with time to quantify this decline in radial extension rate with coral size between chronological tie points. Applying the area-based model to our Δ14C bomb spike time series from individual corals improves chronology accuracy for all live-collected corals with complete Δ14C bomb spikes. Hence, this study provides paleoceanographers utilizing bamboo corals with a method for reducing age model uncertainty within the anthropogenic bomb spike era ( 1957-present). Chronological uncertainty is larger for the earliest portion of coral growth, particularly for skeleton precipitated prior to bomb spike tie points, meaning age estimations for samples living before 1957 remain uncertain. Combining this technique with additional chronological markers could improve age models for an entire bamboo coral. Finally, the relative consistency in growth rate in similarly-aged corals of the same depth and location supports the hypothesis that skeletal growth may be limited by local environmental conditions.

  17. Assessment of the Coral Temperature Proxies for Orbicella faveolata in the Southwestern Gulf of Mexico

    NASA Astrophysics Data System (ADS)

    Vara, M. A.; DeLong, K. L.; Herrmann, A. D.; Ouellette, G., Jr.; Richey, J. N.

    2017-12-01

    Coral Sr/Ca is a robust proxy of sea surface temperature (SST); however, discrepancies in the Sr/Ca-SST relationship among colonies of the same species may reduce confidence in absolute temperature reconstructions. Furthermore, terrestrial carbonate weathering can provide local sources of Sr and/or Ca to coastal waters that may disrupt the temperature-based coral Sr/Ca signal. Thus other trace metal SST proxies have been suggested to circumvent these issues (Li/Ca, Li/Mg, and Sr-U). Coral Ba/Ca has been used as a proxy for runoff and coastal upwelling, and therefore may be used to identify intervals when these processes overprint the Sr/Ca-SST signal. This study tests multiple coral SST proxies using reproducibility assessments to determine the best performing SST proxy. We conduct these assessments with cores recovered in 1991 by the U.S. Geological Survey from five Orbicella faveolata colonies from three reefs offshore of Veracruz, Mexico (19.06°N, 96.93°W) in water depths varying from 3 to 12 m. Previous studies found micromilling the complex skeletal structure of O. faveolata challenging and that monthly resolution may not recover full seasonal cycles. We use a laser ablation inductively coupled plasma mass spectrometer to simultaneously sample this coral's structure at weekly intervals spanning 8 years for Li/Ca, Li/Mg, Sr-U, Sr/Ca, and Ba/Ca. Here we found coral Li/Ca means and seasonal variations are similar among colonies thus this proxy may capture absolute temperature and SST variability. Similar to previous research with Porites corals, Li/Ca in these O. faveolata corals decreases with increases in SST with similar slopes and intercepts. During the last 10 years of these corals' lives, coral Sr/Ca analysis reveals a mean shift among colonies suggesting an external source could have disrupted the Sr/Ca signal, possibly seasonal runoff and/or winter upwelling common to Veracruz waters. Coral Ba/Ca analyses reveals elevated values in winters that coincide with increases in coral Sr/Ca in the deeper colony suggesting upwelling is occurring at that location. However, the coral Ba/Ca does not coincide with increase coral Sr/Ca in the shallower coral indicating no direct influence from runoff. Coral Li/Mg and Sr-U do not show substantial seasonal variations as expected with a coral-SST proxy.

  18. Using X-Ray Fluorescence Technique to Quantify Metal Concentration in Coral Cores from Belize

    NASA Astrophysics Data System (ADS)

    Kingsley, C.; Bhattacharya, A.; Hangsterfer, A.; Carilli, J.; Field, D. B.

    2016-12-01

    Caribbean coral reefs are some of the most threatened marine ecosystems in the world. Research appears to suggest that environmental stressors of local origin, such as sediment run off, can reduce the resilience of these reefs to global threats such as ocean warming. Sedimentation can stunt coral growth, reduce its resilience, and it is possible that trapped material could render coral skeletons brittle (personal discussions). Material trapped in coral skeletons can provide information on the sources of particulate matter in the ocean ecosystem. Despite the importance of quantifying sources and types of materials trapped in corals, the research community is yet to fully develop techniques that allow accurate representation of trapped matter, which is potentially a major source of metal content in reef building coral skeletons. The dataset presented here explores the usefulness of X-Ray Fluorescence (XRF), a widely used tool in environmental studies (but generally not in corals), to estimate metal content in coral cores collected from four locations near Belize, with varying degrees of impact from coastal processes. The coral cores together cover a period of 1862-2006. Trace, major, and minor metal content from these cores have been well-studied using solution-based ICP-MS, providing us with the unique opportunity to test the efficacy of XRF technique in characterizing metal content in these coral cores. We have measured more than 50 metals using XRF every two millimeters along slabs removed from the middle of a coral core to characterize materials present in coral skeletons. We compared the results from XRF to solution-based ICP-MS - that involves dissolving subsamples of coral skeleton to measure metal content. Overall, it appears that the non-destructive XRF technique is a viable supplement in determining sediment and metal content in coral cores, and may be particularly helpful for assessing resistant phases such as grains of sediment that are not fully dissolved in the typical solution-based ICP-MS methodology. We also compared our XRF results with coral biology, environmental and climate information (regional and global). Our research clearly has strong implications far beyond that of these specific corals in Belize and will help researchers all over the world understand what is happening to coral reefs.

  19. The influence of fire-coral colony size and agonistic behaviour of territorial damselfish on associated coral reef fish communities.

    PubMed

    Leal, Isabela Carolina Silva; de Araújo, Maria Elisabeth; da Cunha, Simone Rabelo; Pereira, Pedro Henrique Cipresso

    2015-07-01

    Branching hydrocorals from the genus Millepora play an important ecological role in South Atlantic reefs, where branching scleractinian corals are absent. Previous studies have shown a high proportion of reef fish species using branching fire-coral colonies as shelter, breeding, and feeding sites. However, the effects of Millepora spp. colony size and how the agonistic behaviour of a competitive damselfish affect the associated reef fish community are still unknown. The present study examined how fire-coral colony volume and the presence of a highly territorial and aggressive damselfish (Brazilian endemic Stegastes fuscus) affects the reef fish community associated with the fire-coral Millepora alcicornis. M. alcicornis colonies were surveyed from September 2012 to April 2013 at Tamandaré Reefs off Northeast Brazil. Our results show that the abundance and richness of coral associated fish was positively correlated with M. alcicornis coral colony volume. Additionally, behaviour of S. fuscus, the most abundant reef fish species found associated with fire-coral colonies (almost 57% of the fish community), was also influenced by fire-coral colony volume. There was a clear trend of increased agonistic behaviour and feeding on coral polyps as colony volume increased. This trend was reversed for the non-occupational swimming category, which decreased as M. alcicornis colony volume increased. Behavioural ontogenetic changes were also detected for S. fuscus individuals. Juveniles mainly showed two distinct behaviours: sheltered on coral branches and feeding on coral polyps. In contrast, adults presented greater equitability among the behavioural categories, mostly non-occupational swimming around coral colonies and agonistic behaviour. Lastly, S. fuscus individuals actively defended fire-coral colonies from intruders. A large number of agonistic interactions occurred against potential food competitors, which were mainly roving herbivores, omnivores, and sessile invertebrate feeders. To our knowledge, the present study provides the first evidence that through habitat competition, the presence of S. fuscus may affect reef fish communities associated with M. alcicornis coral colonies. Our findings also indicate that S. fuscus uses M. alcicornis coral colonies as part of their territory for shelter and foraging. In conclusion, M. alcicornis fire-coral colonies are extremely important habitats for reef fishes and the size and presence of a territorial damselfish are relevant variables for associated reef fish community. Copyright © 2015 Elsevier Ltd. All rights reserved.

  20. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Miyazaki, Tadakuni; Harashima, Akira; Nakatani, Yukihiro

    Coral reefs are the major sites for photo-synthesis and calcification in the present ocean. Estimating the production rate of calcification by the coral reefs or investigating the sink/source mechanism of CO{sub 2} by the coral reefs in the ocean, the distribution of the coral reefs in the world wide must be identified. Measuring the spectral signatures of underwater coral reefs and mapping of coral reefs by satellite remote sensing are described. The spectral signatures of different species of the coral reefs were measured using a spectroradiometer at off Kuroshima Island, Okinawa, Japan and investigated spectral difference between different species ofmore » the coral reefs. As well as the field experiments, laboratory experiments for measuring the spectral signatures of 9 different species of coral reefs were carried out with the same spectroradiometer. The spectral reflectance of each coral reef showed a significant result that a narrow absorption band exists in the spectral region between 660 and 680 nm, and very strong spectral reflectance from about 700 nm towards the longer wavelength range. On the other hand, absorption and the high reflectance region were not observed from the bottom sands or bare rocks underwater. These experiments suggested that there is a significant spectral difference between coral reefs and bottom sands or bare rocks and so the best spectral range for separating the coral reefs from other underwater objects in the ocean would be between 700 and 800 nm. As well as the basic spectral measurement either in the field or at the laboratory, SPOT satellite imageries were used to classify the underwater coral reefs. Classification methods used here were the principal component analysis, and the maximum likelihood. Finally, the evaluation of classification method for extracting the coral reefs was introduced.« less

  1. Changes in Bleaching Susceptibility among Corals Subject to Ocean Warming and Recurrent Bleaching in Moorea, French Polynesia

    PubMed Central

    Pratchett, Morgan S.; McCowan, Dominique; Maynard, Jeffrey A.; Heron, Scott F.

    2013-01-01

    Background Climate-induced coral bleaching poses a major threat to coral reef ecosystems, mostly because of the sensitivities of key habitat-forming corals to increasing temperature. However, susceptibility to bleaching varies greatly among coral genera and there are likely to be major changes in the relative abundance of different corals, even if the wholesale loss of corals does not occur for several decades. Here we document variation in bleaching susceptibility among key genera of reef-building corals in Moorea, French Polynesia, and compare bleaching incidence during mass-bleaching events documented in 1991, 1994, 2002 and 2007. Methodology/Principal Findings This study compared the proportion of colonies that bleached for four major genera of reef-building corals (Acropora, Montipora, Pocillopora and Porites), during each of four well-documented bleaching events from 1991 to 2007. Acropora and Montipora consistently bleached in far greater proportions (up to 98%) than Pocillopora and Porites. However, there was an apparent and sustained decline in the proportion of colonies that bleached during successive bleaching events, especially for Acropora and Montipora. In 2007, only 77% of Acropora colonies bleached compared with 98% in 1991. Temporal variation in the proportion of coral colonies bleached may be attributable to differences in environmental conditions among years. Alternately, the sustained declines in bleaching incidence among highly susceptible corals may be indicative of acclimation or adaptation. Conclusions/Significance Coral genera that are highly susceptible to coral bleaching, and especially Acropora and Montipora, exhibit temporal declines in their susceptibility to thermal anomalies at Moorea, French Polynesia. One possible explanation for these findings is that gradual removal of highly susceptible genotypes (through selective mortality of individuals, populations, and/or species) is producing a coral assemblage that is more resistant to sustained and ongoing ocean warming. PMID:23922992

  2. In situ observations of coral bleaching in the central Saudi Arabian Red Sea during the 2015/2016 global coral bleaching event.

    PubMed

    Monroe, Alison A; Ziegler, Maren; Roik, Anna; Röthig, Till; Hardenstine, Royale S; Emms, Madeleine A; Jensen, Thor; Voolstra, Christian R; Berumen, Michael L

    2018-01-01

    Coral bleaching continues to be one of the most devastating and immediate impacts of climate change on coral reef ecosystems worldwide. In 2015, a major bleaching event was declared as the "3rd global coral bleaching event" by the United States National Oceanic and Atmospheric Administration, impacting a large number of reefs in every major ocean. The Red Sea was no exception, and we present herein in situ observations of the status of coral reefs in the central Saudi Arabian Red Sea from September 2015, following extended periods of high temperatures reaching upwards of 32.5°C in our study area. We examined eleven reefs using line-intercept transects at three different depths, including all reefs that were surveyed during a previous bleaching event in 2010. Bleaching was most prevalent on inshore reefs (55.6% ± 14.6% of live coral cover exhibited bleaching) and on shallower transects (41% ± 10.2% of live corals surveyed at 5m depth) within reefs. Similar taxonomic groups (e.g., Agariciidae) were affected in 2015 and in 2010. Most interestingly, Acropora and Porites had similar bleaching rates (~30% each) and similar relative coral cover (~7% each) across all reefs in 2015. Coral genera with the highest levels of bleaching (>60%) were also among the rarest (<1% of coral cover) in 2015. While this bodes well for the relative retention of coral cover, it may ultimately lead to decreased species richness, often considered an important component of a healthy coral reef. The resultant long-term changes in these coral reef communities remain to be seen.

  3. Coral bleaching is linked to the capacity of the animal host to supply essential metals to the symbionts.

    PubMed

    Ferrier-Pagès, Christine; Sauzéat, Lucie; Balter, Vincent

    2018-03-23

    Massive coral bleaching events result in extensive coral loss throughout the world. These events are mainly caused by seawater warming, but are exacerbated by the subsequent decrease in nutrient availability in surface waters. It has therefore been shown that nitrogen, phosphorus or iron limitation contribute to the underlying conditions by which thermal stress induces coral bleaching. Generally, information on the trophic ecology of trace elements (micronutrients) in corals, and on how they modulate the coral response to thermal stress is lacking. Here, we demonstrate for the first time that heterotrophic feeding (i.e. the capture of zooplankton prey by the coral host) and thermal stress induce significant changes in micro element concentrations and isotopic signatures of the scleractinian coral Stylophora pistillata. The results obtained first reveal that coral symbionts are the major sink for the heterotrophically acquired micronutrients and accumulate manganese, magnesium and iron from the food. These metals are involved in photosynthesis and antioxidant protection. In addition, we show that fed corals can maintain high micronutrient concentrations in the host tissue during thermal stress and do not bleach, whereas unfed corals experience a significant decrease in copper, zinc, boron, calcium and magnesium in the host tissue and bleach. In addition, the significant increase in δ 65 Cu and δ 66 Zn signature of symbionts and host tissue at high temperature suggests that these isotopic compositions are good proxy for stress in corals. Overall, present findings highlight a new way in which coral heterotrophy and micronutrient availability contribute to coral resistance to global warming and bleaching. © 2018 John Wiley & Sons Ltd.

  4. Not equal in the face of habitat change: closely related fishes differ in their ability to use predation-related information in degraded coral

    PubMed Central

    2017-01-01

    Coral reefs are biodiversity hotpots that are under significant threat due to the degradation and death of hard corals. When obligate coral-dwelling species die, the remaining species must either move or adjust to the altered conditions. Our goal was to investigate the effect of coral degradation on the ability of coral reef fishes to assess their risk of predation using alarm cues from injured conspecifics. Here, we tested the ability of six closely related species of juvenile damselfish (Pomacentridae) to respond to risk cues in both live coral or dead-degraded coral environments. Of those six species, two are exclusively associated with live coral habitats, two are found mostly on dead-degraded coral rubble, while the last two are found in both habitat types. We found that the two live coral associates failed to respond appropriately to the cues in water from degraded habitats. In contrast, the cue response of the two rubble associates was unaffected in the same degraded habitat. Interestingly, we observed a mixed response from the species found in both habitat types, with one species displaying an appropriate cue response while the other did not. Our second experiment suggested that the lack of responses stemmed from deactivation of the alarm cues, rather than the inability of the species to smell. Habitat preference (live coral versus dead coral associates) and phylogeny are good candidates for future work aimed at predicting which species are affected by coral degradation. Our results point towards a surprising level of variation in the ability of congeneric species to fare in altered habitats and hence underscores the difficulty of predicting community change in degraded habitats. PMID:28404773

  5. Changes in bleaching susceptibility among corals subject to ocean warming and recurrent bleaching in Moorea, French Polynesia.

    PubMed

    Pratchett, Morgan S; McCowan, Dominique; Maynard, Jeffrey A; Heron, Scott F

    2013-01-01

    Climate-induced coral bleaching poses a major threat to coral reef ecosystems, mostly because of the sensitivities of key habitat-forming corals to increasing temperature. However, susceptibility to bleaching varies greatly among coral genera and there are likely to be major changes in the relative abundance of different corals, even if the wholesale loss of corals does not occur for several decades. Here we document variation in bleaching susceptibility among key genera of reef-building corals in Moorea, French Polynesia, and compare bleaching incidence during mass-bleaching events documented in 1991, 1994, 2002 and 2007. This study compared the proportion of colonies that bleached for four major genera of reef-building corals (Acropora, Montipora, Pocillopora and Porites), during each of four well-documented bleaching events from 1991 to 2007. Acropora and Montipora consistently bleached in far greater proportions (up to 98%) than Pocillopora and Porites. However, there was an apparent and sustained decline in the proportion of colonies that bleached during successive bleaching events, especially for Acropora and Montipora. In 2007, only 77% of Acropora colonies bleached compared with 98% in 1991. Temporal variation in the proportion of coral colonies bleached may be attributable to differences in environmental conditions among years. Alternately, the sustained declines in bleaching incidence among highly susceptible corals may be indicative of acclimation or adaptation. Coral genera that are highly susceptible to coral bleaching, and especially Acropora and Montipora, exhibit temporal declines in their susceptibility to thermal anomalies at Moorea, French Polynesia. One possible explanation for these findings is that gradual removal of highly susceptible genotypes (through selective mortality of individuals, populations, and/or species) is producing a coral assemblage that is more resistant to sustained and ongoing ocean warming.

  6. In situ observations of coral bleaching in the central Saudi Arabian Red Sea during the 2015/2016 global coral bleaching event

    PubMed Central

    Ziegler, Maren; Roik, Anna; Röthig, Till; Hardenstine, Royale S.; Emms, Madeleine A.; Jensen, Thor; Voolstra, Christian R.; Berumen, Michael L.

    2018-01-01

    Coral bleaching continues to be one of the most devastating and immediate impacts of climate change on coral reef ecosystems worldwide. In 2015, a major bleaching event was declared as the “3rd global coral bleaching event” by the United States National Oceanic and Atmospheric Administration, impacting a large number of reefs in every major ocean. The Red Sea was no exception, and we present herein in situ observations of the status of coral reefs in the central Saudi Arabian Red Sea from September 2015, following extended periods of high temperatures reaching upwards of 32.5°C in our study area. We examined eleven reefs using line-intercept transects at three different depths, including all reefs that were surveyed during a previous bleaching event in 2010. Bleaching was most prevalent on inshore reefs (55.6% ± 14.6% of live coral cover exhibited bleaching) and on shallower transects (41% ± 10.2% of live corals surveyed at 5m depth) within reefs. Similar taxonomic groups (e.g., Agariciidae) were affected in 2015 and in 2010. Most interestingly, Acropora and Porites had similar bleaching rates (~30% each) and similar relative coral cover (~7% each) across all reefs in 2015. Coral genera with the highest levels of bleaching (>60%) were also among the rarest (<1% of coral cover) in 2015. While this bodes well for the relative retention of coral cover, it may ultimately lead to decreased species richness, often considered an important component of a healthy coral reef. The resultant long-term changes in these coral reef communities remain to be seen. PMID:29672556

  7. Effects of predation and nutrient enrichment on the success and microbiome of a foundational coral.

    PubMed

    Shaver, Elizabeth C; Shantz, Andrew A; McMinds, Ryan; Burkepile, Deron E; Vega Thurber, Rebecca L; Silliman, Brian R

    2017-03-01

    By inflicting damage to prey tissues, consumer species may increase stress in prey hosts and reduce overall fitness (i.e., primary effects, such as growth or reproduction) or cause secondary effects by affecting prey interactions with other species such as microbes. However, little is known about how abiotic conditions affect the outcomes of these biotic interactions. In coral reef communities, both nutrient enrichment and predation have been linked to reduced fitness and disease facilitation in corals, yet no study to date has tested their combined effects on corals or their associated microbial communities (i.e., microbiomes). Here, we assess the effects of grazing by a prevalent coral predator (the short coral snail, Coralliophila abbreviata) and nutrient enrichment on staghorn coral, Acropora cervicornis, and its microbiomes using a factorial experiment and high-throughput DNA sequencing. We found that predation, but not nutrients, significantly reduced coral growth and increased mortality, tissue loss, and turf algae colonization. Partial predation and nutrient enrichment both independently altered coral microbiomes such that one bacterial genus came to dominate the microbial community. Nutrient-enriched corals were associated with significant increases in Rickettsia-like organisms, which are currently one of several microbial groups being investigated as a disease agent in this coral species. However, we found no effects of nutrient enrichment on coral health, disease, or their predators. This research suggests that in the several months following coral transplantation (i.e., restoration) or disturbance (i.e., recovery), Caribbean acroporid corals appear to be highly susceptible to negative effects caused by predators, but not or not yet susceptible to nutrient enrichment despite changes to their microbial communities. © 2016 by the Ecological Society of America.

  8. Modeling regional coral reef responses to global warming and changes in ocean chemistry: Caribbean case study

    USGS Publications Warehouse

    Buddemeier, R.W.; Lane, D.R.; Martinich, J.A.

    2011-01-01

    Climatic change threatens the future of coral reefs in the Caribbean and the important ecosystem services they provide. We used a simulation model [Combo ("COral Mortality and Bleaching Output")] to estimate future coral cover in the part of the eastern Caribbean impacted by a massive coral bleaching event in 2005. Combo calculates impacts of future climate change on coral reefs by combining impacts from long-term changes in average sea surface temperature (SST) and ocean acidification with impacts from episodic high temperature mortality (bleaching) events. We used mortality and heat dose data from the 2005 bleaching event to select historic temperature datasets, to use as a baseline for running Combo under different future climate scenarios and sets of assumptions. Results suggest a bleak future for coral reefs in the eastern Caribbean. For three different emissions scenarios from the Intergovernmental Panel on Climate Change (IPCC; B1, A1B, and A1FI), coral cover on most Caribbean reefs is projected to drop below 5% by the year 2035, if future mortality rates are equivalent to some of those observed in the 2005 event (50%). For a scenario where corals gain an additional 1-1. 5??C of heat tolerance through a shift in the algae that live in the coral tissue, coral cover above 5% is prolonged until 2065. Additional impacts such as storms or anthropogenic damage could result in declines in coral cover even faster than those projected here. These results suggest the need to identify and preserve the locations that are likely to have a higher resiliency to bleaching to save as many remnant populations of corals as possible in the face of projected wide-spread coral loss. ?? 2011 The Author(s).

  9. Clumped isotope composition of cold-water corals: A role for vital effects?

    NASA Astrophysics Data System (ADS)

    Spooner, Peter T.; Guo, Weifu; Robinson, Laura F.; Thiagarajan, Nivedita; Hendry, Katharine R.; Rosenheim, Brad E.; Leng, Melanie J.

    2016-04-01

    The carbonate clumped isotope thermometer is a promising tool for determining past ocean temperatures. It is based on the temperature dependence of rare isotopes 'clumping' into the same carbonate ion group in the carbonate mineral lattice. The extent of this clumping effect is independent of the isotope composition of the water from which carbonate precipitates, providing unique advantages over many other paleotemperature proxies. Existing calibrations of this thermometer in cold-water and warm-water corals suggest clumped isotope 'vital effects' are negligible in cold-water corals but may be significant in warm-water corals. Here, we test the calibration of the carbonate clumped isotope thermometer in cold-water corals with a recently collected and well characterised sample set spanning a range of coral genera (Balanophyllia, Caryophyllia, Dasmosmilia, Desmophyllum, Enallopsammia and Javania). The clumped isotope compositions (Δ47) of these corals exhibit systematic dependences on their growth temperatures, confirming the basis of the carbonate clumped isotope thermometer. However, some cold-water coral genera show Δ47 values that are higher than the expected equilibrium values by up to 0.05‰ (equivalent to underestimating temperature by ∼9 °C) similar to previous findings for some warm-water corals. This finding suggests that the vital effects affecting corals Δ47 are common to both warm- and cold-water corals. By comparison with models of the coral calcification process we suggest that the clumped isotope offsets in these genera are related to the kinetic isotope effects associated with CO2 hydration/hydroxylation reactions in the corals' calcifying fluid. Our findings complicate the use of the carbonate clumped isotope thermometer in corals, but suggest that species- or genus-specific calibrations could be useful for the future application of this paleotemperature proxy.

  10. Occurrence and distribution of Polycyclic aromatic hydrocarbons (PAHs) in seawater, sediments and corals from Hainan Island, China.

    PubMed

    Xiang, Nan; Jiang, Chunxia; Yang, Tinghan; Li, Ping; Wang, Haihua; Xie, Yanli; Li, Sennan; Zhou, Hailong; Diao, Xiaoping

    2018-05-15

    The levels of 16 US EPA priority polycyclic aromatic hydrocarbons (PAHs) were investigated in corals, ambient seawater and sediments of Hainan Island, China, using gas chromatography - mass spectrometry (GC-MS). The total PAHs (∑PAHs) concentrations ranged from 273.79 to 407.82ng/L in seawater. Besides, the concentrations of ∑PAHs in corals 333.88-727.03ng/g dw) were markedly (P < 0.05) higher than ambient sediments 67.29-196.99ng/g dw), demonstrating the bioaccumulation ability of PAHs by corals. The highest concentration of ∑PAHs was detected at site S2 in Pavona decussate, which also bore the highest ∑PAHs levels in both seawater and sediments. The massive corals were more enriched with PAHs than the branching corals. Although 2 and 3-ring PAHs were predominant and accounted for 69.27-80.46% of the ∑PAHs in corals and ambient environment, the levels of high molecular weight (HMW) PAHs (4-6 ring) in corals also demonstrated their potential dangers for corals and organisms around coral reefs. Biota-sediment accumulation factor (BSAF) refers to an index of the pollutant absorbed by aquatic organisms from the surrounding sediments. The poor correlation between log BSAF and log K ow (hydrophobicity) indicated that PAHs in corals maybe not bioaccumulate from the ambient sediments but through pathways like absorbing from seawater, symbiosis, and feeding. Based on our data, long-term ecological monitoring in typical coral reef ecosystems combined with ecotoxicological tests of PAHs on corals is necessary to determine the impacts of PAHs on coral reefs. Copyright © 2018 Elsevier Inc. All rights reserved.

  11. Not equal in the face of habitat change: closely related fishes differ in their ability to use predation-related information in degraded coral.

    PubMed

    Ferrari, Maud C O; McCormick, Mark I; Allan, Bridie J M; Chivers, Douglas P

    2017-04-12

    Coral reefs are biodiversity hotpots that are under significant threat due to the degradation and death of hard corals. When obligate coral-dwelling species die, the remaining species must either move or adjust to the altered conditions. Our goal was to investigate the effect of coral degradation on the ability of coral reef fishes to assess their risk of predation using alarm cues from injured conspecifics. Here, we tested the ability of six closely related species of juvenile damselfish (Pomacentridae) to respond to risk cues in both live coral or dead-degraded coral environments. Of those six species, two are exclusively associated with live coral habitats, two are found mostly on dead-degraded coral rubble, while the last two are found in both habitat types. We found that the two live coral associates failed to respond appropriately to the cues in water from degraded habitats. In contrast, the cue response of the two rubble associates was unaffected in the same degraded habitat. Interestingly, we observed a mixed response from the species found in both habitat types, with one species displaying an appropriate cue response while the other did not. Our second experiment suggested that the lack of responses stemmed from deactivation of the alarm cues, rather than the inability of the species to smell. Habitat preference (live coral versus dead coral associates) and phylogeny are good candidates for future work aimed at predicting which species are affected by coral degradation. Our results point towards a surprising level of variation in the ability of congeneric species to fare in altered habitats and hence underscores the difficulty of predicting community change in degraded habitats. © 2017 The Authors.

  12. Season, but not symbiont state, drives microbiome structure in the temperate coral Astrangia poculata.

    PubMed

    Sharp, Koty H; Pratte, Zoe A; Kerwin, Allison H; Rotjan, Randi D; Stewart, Frank J

    2017-09-15

    Understanding the associations among corals, their photosynthetic zooxanthella symbionts (Symbiodinium), and coral-associated prokaryotic microbiomes is critical for predicting the fidelity and strength of coral symbioses in the face of growing environmental threats. Most coral-microbiome associations are beneficial, yet the mechanisms that determine the composition of the coral microbiome remain largely unknown. Here, we characterized microbiome diversity in the temperate, facultatively symbiotic coral Astrangia poculata at four seasonal time points near the northernmost limit of the species range. The facultative nature of this system allowed us to test seasonal influence and symbiotic state (Symbiodinium density in the coral) on microbiome community composition. Change in season had a strong effect on A. poculata microbiome composition. The seasonal shift was greatest upon the winter to spring transition, during which time A. poculata microbiome composition became more similar among host individuals. Within each of the four seasons, microbiome composition differed significantly from that of surrounding seawater but was surprisingly uniform between symbiotic and aposymbiotic corals, even in summer, when differences in Symbiodinium density between brown and white colonies are the highest, indicating that the observed seasonal shifts are not likely due to fluctuations in Symbiodinium density. Our results suggest that symbiotic state may not be a primary driver of coral microbial community organization in A. poculata, which is a surprise given the long-held assumption that excess photosynthate is of importance to coral-associated microbes. Rather, other environmental or host factors, in this case, seasonal changes in host physiology associated with winter quiescence, may drive microbiome diversity. Additional studies of A. poculata and other facultatively symbiotic corals will provide important comparisons to studies of reef-building tropical corals and therefore help to identify basic principles of coral microbiome assembly, as well as functional relationships among holobiont members.

  13. Coral thermal tolerance: tuning gene expression to resist thermal stress.

    PubMed

    Bellantuono, Anthony J; Granados-Cifuentes, Camila; Miller, David J; Hoegh-Guldberg, Ove; Rodriguez-Lanetty, Mauricio

    2012-01-01

    The acclimatization capacity of corals is a critical consideration in the persistence of coral reefs under stresses imposed by global climate change. The stress history of corals plays a role in subsequent response to heat stress, but the transcriptomic changes associated with these plastic changes have not been previously explored. In order to identify host transcriptomic changes associated with acquired thermal tolerance in the scleractinian coral Acropora millepora, corals preconditioned to a sub-lethal temperature of 3°C below bleaching threshold temperature were compared to both non-preconditioned corals and untreated controls using a cDNA microarray platform. After eight days of hyperthermal challenge, conditions under which non-preconditioned corals bleached and preconditioned corals (thermal-tolerant) maintained Symbiodinium density, a clear differentiation in the transcriptional profiles was revealed among the condition examined. Among these changes, nine differentially expressed genes separated preconditioned corals from non-preconditioned corals, with 42 genes differentially expressed between control and preconditioned treatments, and 70 genes between non-preconditioned corals and controls. Differentially expressed genes included components of an apoptotic signaling cascade, which suggest the inhibition of apoptosis in preconditioned corals. Additionally, lectins and genes involved in response to oxidative stress were also detected. One dominant pattern was the apparent tuning of gene expression observed between preconditioned and non-preconditioned treatments; that is, differences in expression magnitude were more apparent than differences in the identity of genes differentially expressed. Our work revealed a transcriptomic signature underlying the tolerance associated with coral thermal history, and suggests that understanding the molecular mechanisms behind physiological acclimatization would be critical for the modeling of reefs in impending climate change scenarios.

  14. Temperature and Light Effects on Extracellular Superoxide Production by Algal and Bacterial Symbionts in Corals: Implications for Coral Bleaching

    NASA Astrophysics Data System (ADS)

    Brighi, C.; Diaz, J. M.; Apprill, A.; Hansel, C. M.

    2014-12-01

    Increased surface seawater temperature due to global warming is one of the main causes of coral bleaching, a phenomenon in which corals lose their photosynthetic algae. Light and temperature induced production of superoxide and other reactive oxygen species (ROS) by these symbiotic algae has been implicated in the breakdown of their symbiotic association with the coral host and subsequent coral bleaching. Nevertheless, a direct link between Symbiodinium ROS production and coral bleaching has not been demonstrated. In fact, given the abundance and diversity of microorganisms within the coral holobiont, the concentration and fluxes of ROS within corals may involve several microbial sources and sinks. Here, we explore the role of increased light and temperature on superoxide production by coral-derived cultures of Symbiodinium algae and Oceanospirillales bacteria of the genus Endozoicomonas, which are globally common and abundant associates of corals. Using a high sensitivity chemiluminescent technique, we find that heat stress (exposure to 34°C vs. 23°C for 2hr or 24hr) has no significant effect on extracellular superoxide production by Symbiodinium isolates within clades B and C, regardless of the level of light exposure. Exposure to high light, however, increased superoxide production by these organisms at both 34°C and 23°C. On the other hand, extracellular superoxide production by Endozoicomonas bacteria tested under the same conditions was stimulated by the combined effects of thermal and light stress. The results of this research suggest that the sources and physical triggers for biological superoxide production within corals are more complex than currently assumed. Thus, further investigations into the biological processes controlling ROS dynamics within corals are required to improve our understanding of the mechanisms underpinning coral bleaching and to aid in the development of mitigation strategies.

  15. Coral Thermal Tolerance: Tuning Gene Expression to Resist Thermal Stress

    PubMed Central

    Bellantuono, Anthony J.; Granados-Cifuentes, Camila; Miller, David J.; Hoegh-Guldberg, Ove; Rodriguez-Lanetty, Mauricio

    2012-01-01

    The acclimatization capacity of corals is a critical consideration in the persistence of coral reefs under stresses imposed by global climate change. The stress history of corals plays a role in subsequent response to heat stress, but the transcriptomic changes associated with these plastic changes have not been previously explored. In order to identify host transcriptomic changes associated with acquired thermal tolerance in the scleractinian coral Acropora millepora, corals preconditioned to a sub-lethal temperature of 3°C below bleaching threshold temperature were compared to both non-preconditioned corals and untreated controls using a cDNA microarray platform. After eight days of hyperthermal challenge, conditions under which non-preconditioned corals bleached and preconditioned corals (thermal-tolerant) maintained Symbiodinium density, a clear differentiation in the transcriptional profiles was revealed among the condition examined. Among these changes, nine differentially expressed genes separated preconditioned corals from non-preconditioned corals, with 42 genes differentially expressed between control and preconditioned treatments, and 70 genes between non-preconditioned corals and controls. Differentially expressed genes included components of an apoptotic signaling cascade, which suggest the inhibition of apoptosis in preconditioned corals. Additionally, lectins and genes involved in response to oxidative stress were also detected. One dominant pattern was the apparent tuning of gene expression observed between preconditioned and non-preconditioned treatments; that is, differences in expression magnitude were more apparent than differences in the identity of genes differentially expressed. Our work revealed a transcriptomic signature underlying the tolerance associated with coral thermal history, and suggests that understanding the molecular mechanisms behind physiological acclimatization would be critical for the modeling of reefs in impending climate change scenarios. PMID:23226355

  16. Competitive interactions between corals and turf algae depend on coral colony form

    PubMed Central

    Vermeij, Mark JA

    2016-01-01

    Turf algae are becoming more abundant on coral reefs worldwide, but their effects on other benthic organisms remain poorly described. To describe the general characteristics of competitive interactions between corals and turf algae, we determined the occurrence and outcomes of coral–turf algal interactions among different coral growth forms (branching, upright, massive, encrusting, plating, and solitary) on a shallow reef in Vietnam. In total, the amount of turf algal interaction, i.e., the proportion of the coral boundary directly bordering turf algae, was quantified for 1,276 coral colonies belonging to 27 genera and the putative outcome of each interaction was noted. The amount of turf algal interaction and the outcome of these interactions differed predictably among the six growth forms. Encrusting corals interacted most often with turf algae, but also competed most successfully against turf algae. The opposite was observed for branching corals, which rarely interacted with turf algae and rarely won these competitive interactions. Including all other growth forms, a positive relationship was found between the amount of competitive interactions with neighboring turf algae and the percentage of such interaction won by the coral. This growth form dependent ability to outcompete turf algae was not only observed among coral species, but also among different growth forms in morphologically plastic coral genera (Acropora, Favia, Favites, Montastrea, Montipora, Porites) illustrating the general nature of this relationship. PMID:27190707

  17. A change in coral extension rates and stable isotopes after El Niño-induced coral bleaching and regional stress events

    NASA Astrophysics Data System (ADS)

    Hetzinger, S.; Pfeiffer, M.; Dullo, W.-Chr.; Zinke, J.; Garbe-Schönberg, D.

    2016-09-01

    Coral reefs are biologically diverse ecosystems threatened with effective collapse under rapid climate change, in particular by recent increases in ocean temperatures. Coral bleaching has occurred during major El Niño warming events, at times leading to the die-off of entire coral reefs. Here we present records of stable isotopic composition, Sr/Ca ratios and extension rate (1940-2004) in coral aragonite from a northern Venezuelan site, where reefs were strongly impacted by bleaching following the 1997-98 El Niño. We assess the impact of past warming events on coral extension rates and geochemical proxies. A marked decrease in coral (Pseudodiploria strigosa) extension rates coincides with a baseline shift to more negative values in oxygen and carbon isotopic composition after 1997-98, while a neighboring coral (Siderastrea siderea) recovered to pre-bleaching extension rates simultaneously. However, other stressors, besides high temperature, might also have influenced coral physiology and geochemistry. Coastal Venezuelan reefs were exposed to a series of extreme environmental fluctuations since the mid-1990s, i.e. upwelling, extreme rainfall and sediment input from landslides. This work provides important new data on the potential impacts of multiple regional stress events on coral isotopic compositions and raises questions about the long-term influence on coral-based paleoclimate reconstructions.

  18. Recruitment, mortality, and resilience potential of scleractinian corals at Eilat, Red Sea

    NASA Astrophysics Data System (ADS)

    Shlesinger, Tom; Loya, Yossi

    2016-12-01

    Events of mass coral bleaching and mortality have increased in recent decades worldwide, making coral recruitment more important than ever in sustaining coral-reef ecosystems and ensuring their resilience. During the last four decades, the coral reefs of Eilat have undergone severe deterioration due to both anthropogenic and natural causes. Recruitment failure has been frequently suggested as one of the main mechanisms underlying this deterioration. Here we assess the demographic replenishment and resilience potential of the local reefs, i.e., the potential for new sexually derived corals to recruit and exceed the community's mortality rate. We present a detailed analysis of coral community demography, obtained by means of high-resolution photographic monitoring of permanently marked plots. Coral spats as small as 1 mm were documented and the detailed dynamics of coral recruitment and mortality were recorded, in addition to other common ecological measurements. The cumulative quantity of recruited individuals was twofold to fivefold higher than total mortality. The most significant predictor variable for coral recruitment among all ecological parameters measured was the available substrate for settlement, and the survival of recruited corals was correlated with reef structural complexity. Two consecutive annual reproductive seasons (June-September of each year) with high recruitment rates were monitored. Combined with the high survival of recruits and the increase in coral live cover and abundance, the findings from this study indicate an encouraging potential for recovery of these reefs.

  19. Life histories predict coral community disassembly under multiple stressors.

    PubMed

    Darling, Emily S; McClanahan, Timothy R; Côté, Isabelle M

    2013-06-01

    Climate change is reshaping biological communities against a background of existing human pressure. Evaluating the impacts of multiple stressors on community dynamics can be particularly challenging in species-rich ecosystems, such as coral reefs. Here, we investigate whether life-history strategies and cotolerance to different stressors can predict community responses to fishing and temperature-driven bleaching using a 20-year time series of coral assemblages in Kenya. We found that the initial life-history composition of coral taxa largely determined the impacts of bleaching and coral loss. Prior to the 1998 bleaching event, coral assemblages within no-take marine reserves were composed of three distinct life histories - competitive, stress-tolerant and weedy- and exhibited strong declines following bleaching with limited subsequent recovery. In contrast, fished reefs had lower coral cover, fewer genera and were composed of stress-tolerant and weedy corals that were less affected by bleaching over the long term. Despite these general patterns, we found limited evidence for cotolerance as coral genera and life histories were variable in their sensitivities to fishing and bleaching. Overall, fishing and bleaching have reduced coral diversity and led to altered coral communities of 'survivor' species with stress-tolerant and weedy life histories. Our findings are consistent with expectations that climate change interacting with existing human pressure will result in the loss of coral diversity and critical reef habitat. © 2013 Blackwell Publishing Ltd.

  20. Permanent 'phase shifts' or reversible declines in coral cover? Lack of recovery of two coral reefs in St. John, US Virgin Islands

    USGS Publications Warehouse

    Rogers, C.S.; Miller, J.

    2006-01-01

    Caribbean coral reefs have changed dramatically in the last 3 to 4 decades, with significant loss of coral cover and increases in algae. Here we present trends in benthic cover from 1989 to 2003 at 2 reefs (Lameshur Reef and Newfound Reef) off St. John, US Virgin Islands (USVI). Coral cover has declined in the fore-reef zones at both sites, and no recovery is evident. At Lameshur Reef, Hurricane Hugo (1989) caused significant physical damage and loss of coral. We suggest that macroalgae rapidly colonized new substrate made available by this storm and have hindered or prevented growth of adult corals, as well as settlement and survival of new coral recruits. Overfishing of herbivorous fishes in the USVI and loss of shelter for these fishes because of major storms has presumably reduced the levels of herbivory that formerly controlled algal abundance. Coral cover declined at Newfound Reef from 1999 to 2000, most likely because of coral diseases. The trends that we have documented, loss of coral followed by no evidence of recovery, appear similar to findings from other studies in the Caribbean. We need to focus on functional shifts in the resilience of coral reefs that result in their inability to recover from natural and human-caused stressors. ?? Inter-Research 2006.

  1. Reef Development on Artificial Patch Reefs in Shallow Water of Panjang Island, Central Java

    NASA Astrophysics Data System (ADS)

    Munasik; Sugiyanto; Sugianto, Denny N.; Sabdono, Agus

    2018-02-01

    Reef restoration methods are generally developed by propagation of coral fragments, coral recruits and provide substrate for coral attachment using artificial reefs (ARs). ARs have been widely applied as a tool for reef restoration in degraded natural reefs. Successful of coral restoration is determined by reef development such as increasing coral biomass, natural of coral recruits and fauna associated. Artificial Patch Reefs (APRs) is designed by combined of artificial reefs and coral transplantation and constructed by modular circular structures in shape, were deployed from small boats by scuba divers, and are suitable near natural reefs for shallow water with low visibility of Panjang Island, Central Java. Branching corals of Acropora aspera, Montipora digitata and Porites cylindrica fragments were transplanted on to each module of two units of artificial patch reefs in different periods. Coral fragments of Acropora evolved high survival and high growth, Porites fragments have moderate survival and low growth, while fragment of Montipora show in low survival and moderate growth. Within 19 to 22 months of APRs deployment, scleractinian corals were recruited on the surface of artificial patch reef substrates. The most recruits abundant was Montastrea, followed by Poritids, Pocilloporids, and Acroporids. We conclude that artificial patch reefs with developed by coral fragments and natural coral recruitment is one of an alternative rehabilitation method in shallow reef with low visibility.

  2. A change in coral extension rates and stable isotopes after El Niño-induced coral bleaching and regional stress events.

    PubMed

    Hetzinger, S; Pfeiffer, M; Dullo, W-Chr; Zinke, J; Garbe-Schönberg, D

    2016-09-13

    Coral reefs are biologically diverse ecosystems threatened with effective collapse under rapid climate change, in particular by recent increases in ocean temperatures. Coral bleaching has occurred during major El Niño warming events, at times leading to the die-off of entire coral reefs. Here we present records of stable isotopic composition, Sr/Ca ratios and extension rate (1940-2004) in coral aragonite from a northern Venezuelan site, where reefs were strongly impacted by bleaching following the 1997-98 El Niño. We assess the impact of past warming events on coral extension rates and geochemical proxies. A marked decrease in coral (Pseudodiploria strigosa) extension rates coincides with a baseline shift to more negative values in oxygen and carbon isotopic composition after 1997-98, while a neighboring coral (Siderastrea siderea) recovered to pre-bleaching extension rates simultaneously. However, other stressors, besides high temperature, might also have influenced coral physiology and geochemistry. Coastal Venezuelan reefs were exposed to a series of extreme environmental fluctuations since the mid-1990s, i.e. upwelling, extreme rainfall and sediment input from landslides. This work provides important new data on the potential impacts of multiple regional stress events on coral isotopic compositions and raises questions about the long-term influence on coral-based paleoclimate reconstructions.

  3. Pattern and intensity of human impact on coral reefs depend on depth along the reef profile and on the descriptor adopted

    NASA Astrophysics Data System (ADS)

    Nepote, Ettore; Bianchi, Carlo Nike; Chiantore, Mariachiara; Morri, Carla; Montefalcone, Monica

    2016-09-01

    Coral reefs are threatened by multiple global and local disturbances. The Maldives, already heavily hit by the 1998 mass bleaching event, are currently affected also by growing tourism and coastal development that may add to global impacts. Most of the studies investigating effects of local disturbances on coral reefs assessed the response of communities along a horizontal distance from the impact source. This study investigated the status of a Maldivian coral reef around an island where an international touristic airport has been recently (2009-2011) built, at different depths along the reef profile (5-20 m depth) and considering the change in the percentage of cover of five different non-taxonomic descriptors assessed through underwater visual surveys: hard corals, soft corals, other invertebrates, macroalgae and abiotic attributes. Eight reefs in areas not affected by any coastal development were used as controls and showed a reduction of hard coral cover and an increase of abiotic attributes (i.e. sand, rock, coral rubble) at the impacted reef. However, hard coral cover, the most widely used descriptor of coral reef health, was not sufficient on its own to detect subtle indirect effects that occurred down the reef profile. Selecting an array of descriptors and considering different depths, where corals may find a refuge from climate impacts, could guide the efforts of minimising local human pressures on coral reefs.

  4. Potential role of viruses in white plague coral disease.

    PubMed

    Soffer, Nitzan; Brandt, Marilyn E; Correa, Adrienne M S; Smith, Tyler B; Thurber, Rebecca Vega

    2014-02-01

    White plague (WP)-like diseases of tropical corals are implicated in reef decline worldwide, although their etiological cause is generally unknown. Studies thus far have focused on bacterial or eukaryotic pathogens as the source of these diseases; no studies have examined the role of viruses. Using a combination of transmission electron microscopy (TEM) and 454 pyrosequencing, we compared 24 viral metagenomes generated from Montastraea annularis corals showing signs of WP-like disease and/or bleaching, control conspecific corals, and adjacent seawater. TEM was used for visual inspection of diseased coral tissue. No bacteria were visually identified within diseased coral tissues, but viral particles and sequence similarities to eukaryotic circular Rep-encoding single-stranded DNA viruses and their associated satellites (SCSDVs) were abundant in WP diseased tissues. In contrast, sequence similarities to SCSDVs were not found in any healthy coral tissues, suggesting SCSDVs might have a role in WP disease. Furthermore, Herpesviridae gene signatures dominated healthy tissues, corroborating reports that herpes-like viruses infect all corals. Nucleocytoplasmic large DNA virus (NCLDV) sequences, similar to those recently identified in cultures of Symbiodinium (the algal symbionts of corals), were most common in bleached corals. This finding further implicates that these NCLDV viruses may have a role in bleaching, as suggested in previous studies. This study determined that a specific group of viruses is associated with diseased Caribbean corals and highlights the potential for viral disease in regional coral reef decline.

  5. Micro-topography mediates interactions between corals, algae, and herbivorous fishes on coral reefs

    NASA Astrophysics Data System (ADS)

    Brandl, S. J.; Hoey, A. S.; Bellwood, D. R.

    2014-06-01

    Processes occurring during the early life stages of corals are important for the replenishment of coral assemblages and the resilience of coral reefs. However, the factors influencing early life stages of corals are not well understood, and the role of micro-topographic complexity for habitat associations of juvenile corals is largely unexplored. This study investigated the microhabitat distribution patterns of early life stages of corals and a potential macroalgal competitor ( Turbinaria ornata) across two reef zones (reef crest and outer reef flat) on Lizard Island, Great Barrier Reef. In both reef zones, both corals and T. ornata were significantly more abundant in concealed microhabitats than in semi-concealed or open microhabitats (GLMM: P < 0.001). The prevalence of juvenile corals and T. ornata within concealed environments suggests that they might be effective refuges from grazing by herbivorous fishes. The density of juvenile corals was positively related, and density of T. ornata negatively related to the abundance of two groups of herbivorous fishes, pairing rabbitfishes, and surgeonfishes in the genus Zebrasoma (BEST ENV-BIO: r s = 0.72, P < 0.01), which feed in concealed microhabitats. This correlative evidence suggests that crevices may be important for early life stages of both coral and macroalgae, and that a specific suite of crevice-feeding fishes may influence benthic community dynamics in these microhabitats.

  6. Stable nitrogen and carbon isotope (δ 15N and δ 13C) variability in shallow tropical Pacific soft coral and black coral taxa and implications for paleoceanographic reconstructions

    NASA Astrophysics Data System (ADS)

    Williams, Branwen; Grottoli, Andréa G.

    2010-09-01

    Soft corals and black corals are useful proxy tools for paleoceanographic reconstructions. However, most work has focused on deep-water taxa and few studies have used these corals as proxy organisms in shallow water (<200 m). To facilitate the use of stable nitrogen and carbon isotope (δ 15N and δ 13C) records from shallow-water soft coral and black coral taxa for paleoceanographic reconstructions, quantification of the inherent variability in skeletal isotope values between sites, across depth, and among taxa is needed. Here, skeletal δ 15N and δ 13C values were measured in multiple colonies from eleven genera of soft corals and two genera of black corals from across a depth transect (5-105 m) at two sites in Palau located in the tropical western Pacific Ocean. Overall, no difference in skeletal δ 15N and δ 13C values between sites was present. Skeletal δ 15N values significantly increased and δ 13C values decreased with depth. This is consistent with changes in isotope values of suspended particulate organic matter (POM) across the photic zone, suggesting that the primary food source to these corals is suspended POM and that the stable isotopic composition of POM controls the skeletal isotopic composition of these corals. Thus, to compare the isotope records of corals collected across a depth range in the photic zone, first order depth corrections of -0.013‰ m -1 and +0.023‰ m -1 are recommended for δ 15N and δ 13C, respectively. Average depth-corrected δ 15N values were similar between black corals and soft corals, indicating that corals in these orders feed at a similar trophic level. In contrast, average depth-corrected δ 13C values of black corals were significantly lower than that of soft corals, potentially resulting from metabolic processes associated with differing skeletal compositions among the orders (i.e., gorgonin vs. chitin based). Thus, a correction of +1.0‰ is recommended for black corals when comparing their δ 13C-based proxy records to soft corals. After correcting for both the depth and order effects, variability in δ 15N values among corals within each genera was low (standard deviation (SD) of the mean <±0.5‰), with the exception of Acanthorgorgia. The calculated SD of <±0.5‰ provides a first order guideline for the amount of variability that could be expected in a δ 15N record, and suggests that these corals may be useful for δ 15N-based paleoceanographic reconstructions. Variability in δ 13C values among corals within genera was also low (standard deviation of the mean <±0.5‰) with the exception of Rhipidipathes and Villogorgia. Similar to δ 15N, records from the genera studied here with the exception of Rhipidipathes and Villogorgia may be useful for δ 13C-based paleoceanographic reconstructions. Overall, using the recommendations developed here, stable isotope records from multiple sites, depths and taxa of these corals can be more rigorously compared.

  7. 50 CFR 622.77 - Adjustment of management measures.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... ATLANTIC Coral and Coral Reefs of the Gulf of Mexico § 622.77 Adjustment of management measures. In accordance with the framework procedures of the FMP for Coral and Coral Reefs of the Gulf of Mexico, the RA may establish or modify the following: (a) Gulf coral resources. For a species or species group...

  8. 50 CFR 622.77 - Adjustment of management measures.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... ATLANTIC Coral and Coral Reefs of the Gulf of Mexico § 622.77 Adjustment of management measures. In accordance with the framework procedures of the FMP for Coral and Coral Reefs of the Gulf of Mexico, the RA may establish or modify the following: (a) Gulf coral resources. For a species or species group...

  9. 76 FR 18775 - Pacific Remote Islands Marine National Monument; Monument Management Plan, Comprehensive...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-05

    ... equator. These areas have deep-water corals, coral reefs, corals in near-pristine condition, and predator... will be revised as needed. Kingman Reef and Palmyra Atoll have relatively undisturbed coral reefs, with the highest levels of coral diversity in the central Pacific Ocean. Kingman Reef has the greatest...

  10. Assessing the Effects of Disease and Bleaching on Florida Keys Corals by Fitting Population Models to Data

    EPA Science Inventory

    Coral diseases have increased in frequency over the past few decades and have important influences on the structure and composition of coral reef communities. However, there is limited information on the etiologies of many coral diseases, and pathways via which coral diseases ar...

  11. Coral Reef and Coastal Ecosystems Decision Support Workshop April 27-29, 2010 Caribbean Coral Reef Institute, La Parguera, Puerto Rico

    EPA Science Inventory

    The U.S. Environmental Protection Agency (EPA) and Caribbean Coral Reef Institute (CCRI) hosted a Coral Reef and Coastal Ecosystems Decision Support Workshop on April 27-28, 2010 at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico. Forty-three participants, includin...

  12. 50 CFR 665.167 - Quotas.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    .... (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.167(d). Only live coral is counted toward the... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  13. 50 CFR 665.469 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Gold coral harvest moratorium. 665.469... Archipelago Fisheries § 665.469 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  14. 50 CFR 665.669 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Gold coral harvest moratorium. 665.669... Island Area Fisheries § 665.669 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  15. 50 CFR 665.269 - Quotas.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ...) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.269(d). Only live coral is counted toward the quota... bed will be closed to all nonselective coral harvesting after the quota for one species of coral has...

  16. 50 CFR 665.467 - Quotas.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... Quotas. (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.467(d). Only live coral is counted toward... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  17. 50 CFR 665.167 - Quotas.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    .... (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.167(d). Only live coral is counted toward the... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  18. 50 CFR 665.467 - Quotas.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Quotas. (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.467(d). Only live coral is counted toward... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  19. 50 CFR 665.269 - Quotas.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ...) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.269(d). Only live coral is counted toward the quota... bed will be closed to all nonselective coral harvesting after the quota for one species of coral has...

  20. 50 CFR 665.167 - Quotas.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    .... (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.167(d). Only live coral is counted toward the... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  1. 50 CFR 665.270 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Gold coral harvest moratorium. 665.270... Fisheries § 665.270 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  2. 50 CFR 665.469 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Gold coral harvest moratorium. 665.469... Archipelago Fisheries § 665.469 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  3. 50 CFR 665.270 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Gold coral harvest moratorium. 665.270... Fisheries § 665.270 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  4. 50 CFR 665.467 - Quotas.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Quotas. (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.467(d). Only live coral is counted toward... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  5. 50 CFR 665.467 - Quotas.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... Quotas. (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.467(d). Only live coral is counted toward... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  6. 50 CFR 665.169 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Gold coral harvest moratorium. 665.169... Fisheries § 665.169 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  7. 50 CFR 665.669 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Gold coral harvest moratorium. 665.669... Island Area Fisheries § 665.669 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  8. 50 CFR 665.269 - Quotas.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ...) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.269(d). Only live coral is counted toward the quota... bed will be closed to all nonselective coral harvesting after the quota for one species of coral has...

  9. 50 CFR 665.167 - Quotas.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    .... (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.167(d). Only live coral is counted toward the... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  10. 50 CFR 665.467 - Quotas.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... Quotas. (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.467(d). Only live coral is counted toward... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  11. 50 CFR 665.169 - Gold coral harvest moratorium.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Gold coral harvest moratorium. 665.169... Fisheries § 665.169 Gold coral harvest moratorium. Fishing for, taking, or retaining any gold coral in any precious coral permit area is prohibited through June 30, 2018. [78 FR 32182, May 29, 2013] ...

  12. 50 CFR 665.167 - Quotas.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    .... (a) General. The quotas limiting the amount of precious coral that may be taken in any precious coral permit area during the fishing year are listed in § 665.167(d). Only live coral is counted toward the... conditional bed will be closed to all nonselective coral harvesting after the quota for one species of coral...

  13. Status and progress in coral reef disease research.

    PubMed

    Weil, Ernesto; Smith, Garriet; Gil-Agudelo, Diego L

    2006-03-23

    Recent findings on the ecology, etiology and pathology of coral pathogens, host resistance mechanisms, previously unknown disease/syndromes and the global nature of coral reef diseases have increased our concern about the health and future of coral reef communities. Much of what has been discovered in the past 4 years is presented in this special issue. Among the significant findings, the role that various Vibrio species play in coral disease and health, the composition of the 'normal microbiota' of corals, and the possible role of viruses in the disease process are important additions to our knowledge. New information concerning disease resistance and vectors, variation in pathogen composition for both fungal diseases of gorgonians and black band disease across oceans, environmental effects on disease susceptibility and resistance, and temporal and spatial disease variations among different coral species is presented in a number of papers. While the Caribbean may still be the 'disease hot spot' for coral reefs, it is now clear that diseases of coral reef organisms have become a global threat to coral reefs and a major cause of reef deterioration.

  14. Multi-species consumer jams and the fall of guarded corals to crown-of-thorns seastar outbreaks

    PubMed Central

    Kayal, Mohsen; Ballard, Jane; Adjeroud, Mehdi

    2018-01-01

    Outbreaks of predatory crown-of-thorns seastars (COTS) can devastate coral reef ecosystems, yet some corals possess mutualistic guardian crabs that defend against COTS attacks. However, guarded corals do not always survive COTS outbreaks, with the ecological mechanisms sealing the fate of these corals during COTS infestations remaining unknown. In August 2008 in Moorea (17.539° S, 149.830° W), French Polynesia, an unusually dense multi-species aggregation of predators was observed feeding upon guarded corals following widespread coral decline due to COTS predation. Concurrent assaults from these amplified, mixed-species predator guilds likely overwhelm mutualistic crab defense, ultimately leading to the fall of guarded corals. Our observations indicate that guarded corals can sustain devastating COTS attacks for an extended duration, but eventually concede to intensifying assaults from diverse predators that aggregate in high numbers as alternative prey decays. The fall of guarded corals is therefore suggested to be ultimately driven by an indirect trophic cascade that leads to amplified attacks from diverse starving predators following prey decline, rather than COTS assaults alone. PMID:29487739

  15. Effects of temperature and salinity on survival rate of cultured corals and photosynthetic efficiency of zooxanthellae in coral tissues

    NASA Astrophysics Data System (ADS)

    Kuanui, Pataporn; Chavanich, Suchana; Viyakarn, Voranop; Omori, Makoto; Lin, Chiahsin

    2015-06-01

    This study investigated the effects of temperature and salinity on growth, survival, and photosynthetic efficiency of three coral species, namely, Pocillopora damicornis, Acropora millepora and Platygyra sinensis of different ages (6 and 18 months old). The experimental corals were cultivated via sexual propagation. Colonies were exposed to 5 different temperatures (18, 23, 28, 33, and 38°C) and 5 different salinities (22, 27, 32, 37, and 42 psu). Results showed that temperature significantly affected photosynthetic efficiency (Fv/Fm) (p < 0.05) compared to salinity. The maximum quantum yield of corals decreased ranging from 5% to 100% when these corals were exposed to different temperatures and salinities. Temperature also significantly affected coral growth and survival. However, corals exposed to changes in salinity showed higher survivorship than those exposed to changes in temperature. Results in this study also showed that corals of different ages and of different species did not display the same physiological responses to changes in environmental conditions. Thus, the ability of corals to tolerate salinity and temperature stresses depends on several factors.

  16. Are coral reefs victims of their own past success?

    PubMed

    Renema, Willem; Pandolfi, John M; Kiessling, Wolfgang; Bosellini, Francesca R; Klaus, James S; Korpanty, Chelsea; Rosen, Brian R; Santodomingo, Nadiezhda; Wallace, Carden C; Webster, Jody M; Johnson, Kenneth G

    2016-04-01

    As one of the most prolific and widespread reef builders, the staghorn coral Acropora holds a disproportionately large role in how coral reefs will respond to accelerating anthropogenic change. We show that although Acropora has a diverse history extended over the past 50 million years, it was not a dominant reef builder until the onset of high-amplitude glacioeustatic sea-level fluctuations 1.8 million years ago. High growth rates and propagation by fragmentation have favored staghorn corals since this time. In contrast, staghorn corals are among the most vulnerable corals to anthropogenic stressors, with marked global loss of abundance worldwide. The continued decline in staghorn coral abundance and the mounting challenges from both local stress and climate change will limit the coral reefs' ability to provide ecosystem services.

  17. Are coral reefs victims of their own past success?

    PubMed Central

    Renema, Willem; Pandolfi, John M.; Kiessling, Wolfgang; Bosellini, Francesca R.; Klaus, James S.; Korpanty, Chelsea; Rosen, Brian R.; Santodomingo, Nadiezhda; Wallace, Carden C.; Webster, Jody M.; Johnson, Kenneth G.

    2016-01-01

    As one of the most prolific and widespread reef builders, the staghorn coral Acropora holds a disproportionately large role in how coral reefs will respond to accelerating anthropogenic change. We show that although Acropora has a diverse history extended over the past 50 million years, it was not a dominant reef builder until the onset of high-amplitude glacioeustatic sea-level fluctuations 1.8 million years ago. High growth rates and propagation by fragmentation have favored staghorn corals since this time. In contrast, staghorn corals are among the most vulnerable corals to anthropogenic stressors, with marked global loss of abundance worldwide. The continued decline in staghorn coral abundance and the mounting challenges from both local stress and climate change will limit the coral reefs’ ability to provide ecosystem services. PMID:27152330

  18. Decadal trends in a coral community and evidence of changed disturbance regime

    NASA Astrophysics Data System (ADS)

    Wakeford, M.; Done, T. J.; Johnson, C. R.

    2008-03-01

    A 23 year data set (1981 2003 inclusive) and the spatially explicit individual-based model “Compete©” were used to investigate the implications of changing disturbance frequency on cover and taxonomic composition of a shallow coral community at Lizard Island, Australia. Near-vertical in situ stereo-photography was used to estimate rates of coral growth, mortality, recruitment and outcomes of pair-wise competitive interactions for 17 physiognomic groups of hard and soft corals. These data were used to parameterise the model, and to quantify impacts of three acute disturbance events that caused significant coral mortality: 1982—a combination of coral bleaching and Crown-of-Thorns starfish; 1990—cyclone waves; and 1996—Crown-of-Thorns starfish. Predicted coral community trajectories were not sensitive to the outcomes of competitive interactions (probably because average coral cover was only 32% and there was strong vertical separation among established corals) or to major changes in recruitment rates. The model trajectory of coral cover matched the observed trajectory accurately until the 1996 disturbance, but only if all coral mortality was confined to the 3 years of acute disturbance. Beyond that date (1997 2003), when the observed community failed to recover, it was necessary to introduce annual chronic background mortality to obtain a good match between modelled and observed coral cover. This qualitative switch in the model may reflect actual loss of resilience in the real community. Simulated over a century, an 8 year disturbance frequency most closely reproduced the mean community composition observed in the field prior to major disturbance events. Shorter intervals between disturbances led to reduced presence of the dominant hard coral groups, and a gradual increase in the slow growing, more resilient soft corals, while longer intervals (up to 16 years) resulted in monopolization by the fastest growing table coral, Acropora hyacinthus.

  19. Rayleigh-based, multi-element coral thermometry: A biomineralization approach to developing climate proxies

    USGS Publications Warehouse

    Gaetani, G.A.; Cohen, A.L.; Wang, Z.; Crusius, John

    2011-01-01

    This study presents a new approach to coral thermometry that deconvolves the influence of water temperature on skeleton composition from that of “vital effects”, and has the potential to provide estimates of growth temperatures that are accurate to within a few tenths of a degree Celsius from both tropical and cold-water corals. Our results provide support for a physico-chemical model of coral biomineralization, and imply that Mg2+ substitutes directly for Ca2+ in biogenic aragonite. Recent studies have identified Rayleigh fractionation as an important influence on the elemental composition of coral skeletons. Daily, seasonal and interannual variations in the amount of aragonite precipitated by corals from each “batch” of calcifying fluid can explain why the temperature dependencies of elemental ratios in coral skeleton differ from those of abiogenic aragonites, and are highly variable among individual corals. On the basis of this new insight into the origin of “vital effects” in coral skeleton, we developed a Rayleigh-based, multi-element approach to coral thermometry. Temperature is resolved from the Rayleigh fractionation signal by combining information from multiple element ratios (e.g., Mg/Ca, Sr/Ca, Ba/Ca) to produce a mathematically over-constrained system of Rayleigh equations. Unlike conventional coral thermometers, this approach does not rely on an initial calibration of coral skeletal composition to an instrumental temperature record. Rather, considering coral skeletogenesis as a biologically mediated, physico-chemical process provides a means to extract temperature information from the skeleton composition using the Rayleigh equation and a set of experimentally determined partition coefficients. Because this approach is based on a quantitative understanding of the mechanism that produces the “vital effect” it should be possible to apply it both across scleractinian species and to corals growing in vastly different environments. Where instrumental temperature records are available, a Rayleigh-based framework allows the effects of stress on coral calcification to be identified on the basis of anomalies in the skeletal composition.

  20. Vulnerability of Coral Reefs to Bioerosion From Land-Based Sources of Pollution

    NASA Astrophysics Data System (ADS)

    Prouty, Nancy G.; Cohen, Anne; Yates, Kimberly K.; Storlazzi, Curt D.; Swarzenski, Peter W.; White, Darla

    2017-12-01

    Ocean acidification (OA), the gradual decline in ocean pH and [CO32-] caused by rising levels of atmospheric CO2, poses a significant threat to coral reef ecosystems, depressing rates of calcium carbonate (CaCO3) production, and enhancing rates of bioerosion and dissolution. As ocean pH and [CO32-] decline globally, there is increasing emphasis on managing local stressors that can exacerbate the vulnerability of coral reefs to the effects of OA. We show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore coral reefs off west Maui lowers the pH of seawater and exposes corals to nitrate concentrations 50 times higher than ambient. Rates of coral calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in coral cores collected in the Pacific under equivalent low pH conditions but living in oligotrophic waters. Heavier coral nitrogen isotope (δ15N) values pinpoint not only site-specific eutrophication, but also a sewage nitrogen source enriched in 15N. Our results show that eutrophication of reef seawater by land-based sources of pollution can magnify the effects of OA through nutrient driven-bioerosion. These conditions could contribute to the collapse of coastal coral reef ecosystems sooner than current projections predict based only on ocean acidification.Plain Language SummaryWe show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore coral reefs off west Maui lowers the pH of seawater and exposes corals to nitrate concentrations 50 times higher than ambient. Rates of coral calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in coral cores collected in the Pacific. With many of Maui's coral reefs in significant decline reducing any stressors at a local scale is important to sustaining future coral reef ecosystems and planning for resiliency.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li class="active"><span>18</span></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_18 --> <div id="page_19" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li class="active"><span>19</span></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="361"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29401493','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29401493"><span>Global patterns and impacts of El Niño events on coral reefs: A meta-analysis.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Claar, Danielle C; Szostek, Lisa; McDevitt-Irwin, Jamie M; Schanze, Julian J; Baum, Julia K</p> <p>2018-01-01</p> <p>Impacts of global climate change on coral reefs are being amplified by pulse heat stress events, including El Niño, the warm phase of the El Niño Southern Oscillation (ENSO). Despite reports of extensive coral bleaching and up to 97% coral mortality induced by El Niño events, a quantitative synthesis of the nature, intensity, and drivers of El Niño and La Niña impacts on corals is lacking. Herein, we first present a global meta-analysis of studies quantifying the effects of El Niño/La Niña-warming on corals, surveying studies from both the primary literature and International Coral Reef Symposium (ICRS) Proceedings. Overall, the strongest signal for El Niño/La Niña-associated coral bleaching was long-term mean temperature; bleaching decreased with decreasing long-term mean temperature (n = 20 studies). Additionally, coral cover losses during El Niño/La Niña were shaped by localized maximum heat stress and long-term mean temperature (n = 28 studies). Second, we present a method for quantifying coral heat stress which, for any coral reef location in the world, allows extraction of remotely-sensed degree heating weeks (DHW) for any date (since 1982), quantification of the maximum DHW, and the time lag since the maximum DHW. Using this method, we show that the 2015/16 El Niño event instigated unprecedented global coral heat stress across the world's oceans. With El Niño events expected to increase in frequency and severity this century, it is imperative that we gain a clear understanding of how these thermal stress anomalies impact different coral species and coral reef regions. We therefore finish with recommendations for future coral bleaching studies that will foster improved syntheses, as well as predictive and adaptive capacity to extreme warming events.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26996922','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26996922"><span>Skeletal light-scattering accelerates bleaching response in reef-building corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Swain, Timothy D; DuBois, Emily; Gomes, Andrew; Stoyneva, Valentina P; Radosevich, Andrew J; Henss, Jillian; Wagner, Michelle E; Derbas, Justin; Grooms, Hannah W; Velazquez, Elizabeth M; Traub, Joshua; Kennedy, Brian J; Grigorescu, Arabela A; Westneat, Mark W; Sanborn, Kevin; Levine, Shoshana; Schick, Mark; Parsons, George; Biggs, Brendan C; Rogers, Jeremy D; Backman, Vadim; Marcelino, Luisa A</p> <p>2016-03-21</p> <p>At the forefront of ecosystems adversely affected by climate change, coral reefs are sensitive to anomalously high temperatures which disassociate (bleaching) photosynthetic symbionts (Symbiodinium) from coral hosts and cause increasingly frequent and severe mass mortality events. Susceptibility to bleaching and mortality is variable among corals, and is determined by unknown proportions of environmental history and the synergy of Symbiodinium- and coral-specific properties. Symbiodinium live within host tissues overlaying the coral skeleton, which increases light availability through multiple light-scattering, forming one of the most efficient biological collectors of solar radiation. Light-transport in the upper ~200 μm layer of corals skeletons (measured as 'microscopic' reduced-scattering coefficient, μ'(S,m)), has been identified as a determinant of excess light increase during bleaching and is therefore a potential determinant of the differential rate and severity of bleaching response among coral species. Here we experimentally demonstrate (in ten coral species) that, under thermal stress alone or combined thermal and light stress, low-μ'(S,m) corals bleach at higher rate and severity than high-μ'(S,m) corals and the Symbiodinium associated with low-μ'(S,m) corals experience twice the decrease in photochemical efficiency. We further modelled the light absorbed by Symbiodinium due to skeletal-scattering and show that the estimated skeleton-dependent light absorbed by Symbiodinium (per unit of photosynthetic pigment) and the temporal rate of increase in absorbed light during bleaching are several fold higher in low-μ'(S,m) corals. While symbionts associated with low-[Formula: see text] corals receive less total light from the skeleton, they experience a higher rate of light increase once bleaching is initiated and absorbing bodies are lost; further precipitating the bleaching response. Because microscopic skeletal light-scattering is a robust predictor of light-dependent bleaching among the corals assessed here, this work establishes μ'(S,m) as one of the key determinants of differential bleaching response.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4439049','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4439049"><span>Coral Settlement on a Highly Disturbed Equatorial Reef System</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Bauman, Andrew G.; Guest, James R.; Dunshea, Glenn; Low, Jeffery; Todd, Peter A.; Steinberg, Peter D.</p> <p>2015-01-01</p> <p>Processes occurring early in the life stages of corals can greatly influence the demography of coral populations, and successful settlement of coral larvae that leads to recruitment is a critical life history stage for coral reef ecosystems. Although corals in Singapore persist in one the world’s most anthropogenically impacted reef systems, our understanding of the role of coral settlement in the persistence of coral communities in Singapore remains limited. Spatial and temporal patterns of coral settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual coral settlement was low (~54.72 spat m-2 yr-1) relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March–May and September–November, coinciding with annual coral spawning periods (March–April and October), while the lowest settlement occurred from December–February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12), possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local coral assemblages or environmental conditions. Pocilloporidae were the most abundant coral spat (83.6%), while Poritidae comprised only 6% of the spat, and Acroporidae <1%. Other, unidentifiable families represented 10% of the coral spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure (‘others’; i.e. sediment-tolerant coral taxa) in Singapore, but that the replenishment capacity of Singapore’s reefs appears relatively constrained, which could lead to less resilient reefs. PMID:25992562</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23469067','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23469067"><span>Spatial variation in abundance, size and orientation of juvenile corals related to the biomass of parrotfishes on the Great Barrier Reef, Australia.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Trapon, Melanie L; Pratchett, Morgan S; Hoey, Andrew S</p> <p>2013-01-01</p> <p>For species with complex life histories such as scleractinian corals, processes occurring early in life can greatly influence the number of individuals entering the adult population. A plethora of studies have examined settlement patterns of coral larvae, mostly on artificial substrata, and the composition of adult corals across multiple spatial and temporal scales. However, relatively few studies have examined the spatial distribution of small (≤50 mm diameter) sexually immature corals on natural reef substrata. We, therefore, quantified the variation in the abundance, composition and size of juvenile corals (≤50 mm diameter) among 27 sites, nine reefs, and three latitudes spanning over 1000 km on Australia's Great Barrier Reef. Overall, 2801 juveniles were recorded with a mean density of 6.9 (±0.3 SE) ind.m(-2), with Acropora, Pocillopora, and Porites accounting for 84.1% of all juvenile corals surveyed. Size-class structure, orientation on the substrate and taxonomic composition of juvenile corals varied significantly among latitudinal sectors. The abundance of juvenile corals varied both within (6-13 ind.m(-2)) and among reefs (2.8-11.1 ind.m(-2)) but was fairly similar among latitudes (6.1-8.2 ind.m(-2)), despite marked latitudinal variation in larval supply and settlement rates previously found at this scale. Furthermore, the density of juvenile corals was negatively correlated with the biomass of scraping and excavating parrotfishes across all sites, revealing a potentially important role of parrotfishes in determining distribution patterns of juvenile corals on the Great Barrier Reef. While numerous studies have advocated the importance of parrotfishes for clearing space on the substrate to facilitate coral settlement, our results suggest that at high biomass they may have a detrimental effect on juvenile coral assemblages. There is, however, a clear need to directly quantify rates of mortality and growth of juvenile corals to understand the relative importance of these mechanisms in shaping juvenile, and consequently adult, coral assemblages.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5798774','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5798774"><span>Global patterns and impacts of El Niño events on coral reefs: A meta-analysis</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Szostek, Lisa; McDevitt-Irwin, Jamie M.; Schanze, Julian J.; Baum, Julia K.</p> <p>2018-01-01</p> <p>Impacts of global climate change on coral reefs are being amplified by pulse heat stress events, including El Niño, the warm phase of the El Niño Southern Oscillation (ENSO). Despite reports of extensive coral bleaching and up to 97% coral mortality induced by El Niño events, a quantitative synthesis of the nature, intensity, and drivers of El Niño and La Niña impacts on corals is lacking. Herein, we first present a global meta-analysis of studies quantifying the effects of El Niño/La Niña-warming on corals, surveying studies from both the primary literature and International Coral Reef Symposium (ICRS) Proceedings. Overall, the strongest signal for El Niño/La Niña-associated coral bleaching was long-term mean temperature; bleaching decreased with decreasing long-term mean temperature (n = 20 studies). Additionally, coral cover losses during El Niño/La Niña were shaped by localized maximum heat stress and long-term mean temperature (n = 28 studies). Second, we present a method for quantifying coral heat stress which, for any coral reef location in the world, allows extraction of remotely-sensed degree heating weeks (DHW) for any date (since 1982), quantification of the maximum DHW, and the time lag since the maximum DHW. Using this method, we show that the 2015/16 El Niño event instigated unprecedented global coral heat stress across the world's oceans. With El Niño events expected to increase in frequency and severity this century, it is imperative that we gain a clear understanding of how these thermal stress anomalies impact different coral species and coral reef regions. We therefore finish with recommendations for future coral bleaching studies that will foster improved syntheses, as well as predictive and adaptive capacity to extreme warming events. PMID:29401493</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012CorRe..31..919C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012CorRe..31..919C"><span>Interactive effects of live coral and structural complexity on the recruitment of reef fishes</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Coker, D. J.; Graham, N. A. J.; Pratchett, M. S.</p> <p>2012-12-01</p> <p>Corals reefs are subjected to multiple disturbances that modify levels of coral cover and structural complexity of the reef matrix, and in turn influence the structure of associated fish communities. With disturbances predicted to increase, insight into how changes in substrate condition will influence the recruitment of many fishes is essential for understanding the recovery of reef fish populations following biological and physical disturbances. While studies have revealed that both live coral cover and structural complexity are important for many fishes, there is a lack of understanding regarding how a combination of these changes will impact the recruitment of fishes. This study used experimentally constructed patch reefs consisting of six different habitat treatments; three levels of live coral cover (high, medium, low) crossed with two levels of structural complexity (high, low), to test the independent and combined effects of live coral cover and structural complexity on the recruitment and recovery of fish communities. The abundance and species diversity of fishes varied significantly among the six habitat treatments, but differences were not clearly associated with either coral cover or structural complexity and varied through time. More striking, however, was a significant difference in the composition of fish assemblages among treatments, due mostly to disproportionate abundance of coral-dwelling fishes on high coral cover, high complexity reefs. Overall, it appears that coral cover had a more important influence than structural complexity, at least for the contrasting levels of structural complexity achieved on experimental patch reefs. Furthermore, we found that live coral cover is important for the recruitment of some non-coral-dependent fishes. This study confirms that live coral cover is critical for the maintenance of high biodiversity on tropical coral reefs, and that sustained and ongoing declines in coral cover will adversely affect recruitment for many different species of reef fishes.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25992562','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25992562"><span>Coral settlement on a highly disturbed equatorial reef system.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bauman, Andrew G; Guest, James R; Dunshea, Glenn; Low, Jeffery; Todd, Peter A; Steinberg, Peter D</p> <p>2015-01-01</p> <p>Processes occurring early in the life stages of corals can greatly influence the demography of coral populations, and successful settlement of coral larvae that leads to recruitment is a critical life history stage for coral reef ecosystems. Although corals in Singapore persist in one the world's most anthropogenically impacted reef systems, our understanding of the role of coral settlement in the persistence of coral communities in Singapore remains limited. Spatial and temporal patterns of coral settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual coral settlement was low (~54.72 spat m(-2) yr(-1)) relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March-May and September-November, coinciding with annual coral spawning periods (March-April and October), while the lowest settlement occurred from December-February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12), possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local coral assemblages or environmental conditions. Pocilloporidae were the most abundant coral spat (83.6%), while Poritidae comprised only 6% of the spat, and Acroporidae <1%. Other, unidentifiable families represented 10% of the coral spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure ('others'; i.e. sediment-tolerant coral taxa) in Singapore, but that the replenishment capacity of Singapore's reefs appears relatively constrained, which could lead to less resilient reefs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2013-title50-vol12/pdf/CFR-2013-title50-vol12-part622-appA.pdf','CFR2013'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2013-title50-vol12/pdf/CFR-2013-title50-vol12-part622-appA.pdf"><span>50 CFR Appendix A to Part 622 - Species Tables</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2013&page.go=Go">Code of Federal Regulations, 2013 CFR</a></p> <p></p> <p>2013-10-01</p> <p>... michelinii, Blushing star Family Caryophylliidae Eusmilia fastigiata, Flower coral Tubastrea aurea, Cup coral... cactus Mussa angulosa, Large flower coral Mycetophyllia aliciae, Thin fungus coral M. danae, Fat fungus...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2014-title50-vol12/pdf/CFR-2014-title50-vol12-part622-appA.pdf','CFR2014'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2014-title50-vol12/pdf/CFR-2014-title50-vol12-part622-appA.pdf"><span>50 CFR Appendix A to Part 622 - Species Tables</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2014&page.go=Go">Code of Federal Regulations, 2014 CFR</a></p> <p></p> <p>2014-10-01</p> <p>... michelinii, Blushing star Family Caryophylliidae Eusmilia fastigiata, Flower coral Tubastrea aurea, Cup coral... cactus Mussa angulosa, Large flower coral Mycetophyllia aliciae, Thin fungus coral M. danae, Fat fungus...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21785439','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21785439"><span>Using the Acropora digitifera genome to understand coral responses to environmental change.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Shinzato, Chuya; Shoguchi, Eiichi; Kawashima, Takeshi; Hamada, Mayuko; Hisata, Kanako; Tanaka, Makiko; Fujie, Manabu; Fujiwara, Mayuki; Koyanagi, Ryo; Ikuta, Tetsuro; Fujiyama, Asao; Miller, David J; Satoh, Nori</p> <p>2011-07-24</p> <p>Despite the enormous ecological and economic importance of coral reefs, the keystone organisms in their establishment, the scleractinian corals, increasingly face a range of anthropogenic challenges including ocean acidification and seawater temperature rise. To understand better the molecular mechanisms underlying coral biology, here we decoded the approximately 420-megabase genome of Acropora digitifera using next-generation sequencing technology. This genome contains approximately 23,700 gene models. Molecular phylogenetics indicate that the coral and the sea anemone Nematostella vectensis diverged approximately 500 million years ago, considerably earlier than the time over which modern corals are represented in the fossil record (∼240 million years ago). Despite the long evolutionary history of the endosymbiosis, no evidence was found for horizontal transfer of genes from symbiont to host. However, unlike several other corals, Acropora seems to lack an enzyme essential for cysteine biosynthesis, implying dependency of this coral on its symbionts for this amino acid. Corals inhabit environments where they are frequently exposed to high levels of solar radiation, and analysis of the Acropora genome data indicates that the coral host can independently carry out de novo synthesis of mycosporine-like amino acids, which are potent ultraviolet-protective compounds. In addition, the coral innate immunity repertoire is notably more complex than that of the sea anemone, indicating that some of these genes may have roles in symbiosis or coloniality. A number of genes with putative roles in calcification were identified, and several of these are restricted to corals. The coral genome provides a platform for understanding the molecular basis of symbiosis and responses to environmental changes.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017AGUFMPP13A1078G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017AGUFMPP13A1078G"><span>Evaluating Coral Health in La Parguera, Puerto Rico, and Southeastern Florida: Comparison of Satellite-Based Sea Surface Temperature to In Situ Observations</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Gomez, A. M.; McDonald, K. C.; Shein, K. A.; Devries, S. L.; Armstrong, R.; Carlo, M.</p> <p>2017-12-01</p> <p>The third global coral bleaching event, which began in mid-2014, is a major environmental stressor that has been causing significant documented damage to coral reefs in all tropical ocean basins. This worldwide phenomenon is the longest and largest coral bleaching event on record and now finally appears to be ending. During this event, some coral colonies proved to be more resilient to increased ocean temperatures while others bleached severely. This research investigates the spatial and temporal variability of bleaching stress on coral reefs in La Parguera, Puerto Rico, and Southeastern Florida to help further understand the role of temperature and light in coral bleaching. We examine the microclimate within two coral reef systems, using in situ collections of temperature and light data from data loggers deployed throughout Cayo Enrique and Cayo Mario in La Parguera, and Lauderdale-By-The-Sea in FLorida. The in situ measurements are compared to NOAA Coral Reef Watch's 5-km sea surface temperature data as well as to the associated Light Stress Damage Product. Research outcomes include statistical analyses of in situ measurements with satellite datasets supporting enhanced interpretation of satellite-based SST and light products, and ecological niche modeling to assess where corals could potentially survive under future climate conditions. Additional understanding of the microclimate encompassing coral reefs and improved satellite SST and light data will ultimately help coral reef ecosystem managers and policy makers in prioritizing resources toward the monitoring and protection of coral reef ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24711964','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24711964"><span>Is coral richness related to community resistance to and recovery from disturbance?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Zhang, Stacy Y; Speare, Kelly E; Long, Zachary T; McKeever, Kimberly A; Gyoerkoe, Megan; Ramus, Aaron P; Mohorn, Zach; Akins, Kelsey L; Hambridge, Sarah M; Graham, Nicholas A J; Nash, Kirsty L; Selig, Elizabeth R; Bruno, John F</p> <p>2014-01-01</p> <p>More diverse communities are thought to be more stable-the diversity-stability hypothesis-due to increased resistance to and recovery from disturbances. For example, high diversity can make the presence of resilient or fast growing species and key facilitations among species more likely. How natural, geographic biodiversity patterns and changes in biodiversity due to human activities mediate community-level disturbance dynamics is largely unknown, especially in diverse systems. For example, few studies have explored the role of diversity in tropical marine communities, especially at large scales. We tested the diversity-stability hypothesis by asking whether coral richness is related to resistance to and recovery from disturbances including storms, predator outbreaks, and coral bleaching on tropical coral reefs. We synthesized the results of 41 field studies conducted on 82 reefs, documenting changes in coral cover due to disturbance, across a global gradient of coral richness. Our results indicate that coral reefs in more species-rich regions were marginally less resistant to disturbance and did not recover more quickly. Coral community resistance was also highly dependent on pre-disturbance coral cover, probably due in part to the sensitivity of fast-growing and often dominant plating acroporid corals to disturbance. Our results suggest that coral communities in biodiverse regions, such as the western Pacific, may not be more resistant and resilient to natural and anthropogenic disturbances. Further analyses controlling for disturbance intensity and other drivers of coral loss and recovery could improve our understanding of the influence of diversity on community stability in coral reef ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22865078','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22865078"><span>Spatial and species variations in bacterial communities associated with corals from the Red Sea as revealed by pyrosequencing.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lee, On On; Yang, Jiangke; Bougouffa, Salim; Wang, Yong; Batang, Zenon; Tian, Renmao; Al-Suwailem, Abdulaziz; Qian, Pei-Yuan</p> <p>2012-10-01</p> <p>Microbial associations with corals are common and are most likely symbiotic, although their diversity and relationships with environmental factors and host species remain unclear. In this study, we adopted a 16S rRNA gene tag-pyrosequencing technique to investigate the bacterial communities associated with three stony Scleractinea and two soft Octocorallia corals from three locations in the Red Sea. Our results revealed highly diverse bacterial communities in the Red Sea corals, with more than 600 ribotypes detected and up to 1,000 species estimated from a single coral species. Altogether, 21 bacterial phyla were recovered from the corals, of which Gammaproteobacteria was the most dominant group, and Chloroflexi, Chlamydiae, and the candidate phylum WS3 were reported in corals for the first time. The associated bacterial communities varied greatly with location, where environmental conditions differed significantly. Corals from disturbed areas appeared to share more similar bacterial communities, but larger variations in community structures were observed between different coral species from pristine waters. Ordination methods identified salinity and depth as the most influential parameters affecting the abundance of Vibrio, Pseudoalteromonas, Serratia, Stenotrophomonas, Pseudomonas, and Achromobacter in the corals. On the other hand, bacteria such as Chloracidobacterium and Endozoicomonas were more sensitive to the coral species, suggesting that the host species type may be influential in the associated bacterial community, as well. The combined influences of the coral host and environmental factors on the associated microbial communities are discussed. This study represents the first comparative study using tag-pyrosequencing technology to investigate the bacterial communities in Red Sea corals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3457102','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3457102"><span>Spatial and Species Variations in Bacterial Communities Associated with Corals from the Red Sea as Revealed by Pyrosequencing</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Lee, On On; Yang, Jiangke; Bougouffa, Salim; Wang, Yong; Batang, Zenon; Tian, Renmao; Al-Suwailem, Abdulaziz</p> <p>2012-01-01</p> <p>Microbial associations with corals are common and are most likely symbiotic, although their diversity and relationships with environmental factors and host species remain unclear. In this study, we adopted a 16S rRNA gene tag-pyrosequencing technique to investigate the bacterial communities associated with three stony Scleractinea and two soft Octocorallia corals from three locations in the Red Sea. Our results revealed highly diverse bacterial communities in the Red Sea corals, with more than 600 ribotypes detected and up to 1,000 species estimated from a single coral species. Altogether, 21 bacterial phyla were recovered from the corals, of which Gammaproteobacteria was the most dominant group, and Chloroflexi, Chlamydiae, and the candidate phylum WS3 were reported in corals for the first time. The associated bacterial communities varied greatly with location, where environmental conditions differed significantly. Corals from disturbed areas appeared to share more similar bacterial communities, but larger variations in community structures were observed between different coral species from pristine waters. Ordination methods identified salinity and depth as the most influential parameters affecting the abundance of Vibrio, Pseudoalteromonas, Serratia, Stenotrophomonas, Pseudomonas, and Achromobacter in the corals. On the other hand, bacteria such as Chloracidobacterium and Endozoicomonas were more sensitive to the coral species, suggesting that the host species type may be influential in the associated bacterial community, as well. The combined influences of the coral host and environmental factors on the associated microbial communities are discussed. This study represents the first comparative study using tag-pyrosequencing technology to investigate the bacterial communities in Red Sea corals. PMID:22865078</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25213651','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25213651"><span>Microbiota of the major South Atlantic reef building coral Mussismilia.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Fernando, Samodha C; Wang, Jia; Sparling, Kimberly; Garcia, Gizele D; Francini-Filho, Ronaldo B; de Moura, Rodrigo L; Paranhos, Rodolfo; Thompson, Fabiano L; Thompson, Janelle R</p> <p>2015-02-01</p> <p>The Brazilian endemic scleractinian corals, genus Mussismilia, are among the main reef builders of the South Atlantic and are threatened by accelerating rates of disease. To better understand how holobiont microbial populations interact with corals during health and disease and to evaluate whether selective pressures in the holobiont or neutral assembly shape microbial composition, we have examined the microbiota structure of Mussismilia corals according to coral lineage, environment, and disease/health status. Microbiota of three Mussismilia species (Mussismilia harttii, Mussismilia hispida, and Mussismilia braziliensis) was compared using 16S rRNA pyrosequencing and clone library analysis of coral fragments. Analysis of biological triplicates per Mussismilia species and reef site allowed assessment of variability among Mussismilia species and between sites for M. braziliensis. From 173,487 V6 sequences, 6,733 coral- and 1,052 water-associated operational taxonomic units (OTUs) were observed. M. braziliensis microbiota was more similar across reefs than to other Mussismilia species microbiota from the same reef. Highly prevalent OTUs were more significantly structured by coral lineage and were enriched in Alpha- and Gammaproteobacteria. Bacterial OTUs from healthy corals were recovered from a M. braziliensis skeleton sample at twice the frequency of recovery from water or a diseased coral suggesting the skeleton is a significant habitat for microbial populations in the holobiont. Diseased corals were enriched with pathogens and opportunists (Vibrios, Bacteroidetes, Thalassomonas, and SRB). Our study examines for the first time intra- and inter-specific variability of microbiota across the genus Mussismilia. Changes in microbiota may be useful indicators of coral health and thus be a valuable tool for coral reef management and conservation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5241398','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5241398"><span>The Assimilation of Diazotroph-Derived Nitrogen by Scleractinian Corals Depends on Their Metabolic Status</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Grover, Renaud; Maguer, Jean-François; Fine, Maoz; Ferrier-Pagès, Christine</p> <p>2017-01-01</p> <p>ABSTRACT Tropical corals are associated with a diverse community of dinitrogen (N2)-fixing prokaryotes (diazotrophs) providing the coral an additional source of bioavailable nitrogen (N) in oligotrophic waters. The overall activity of these diazotrophs changes depending on the current environmental conditions, but to what extent it affects the assimilation of diazotroph-derived N (DDN) by corals is still unknown. Here, in a series of 15N2 tracer experiments, we directly quantified DDN assimilation by scleractinian corals from the Red Sea exposed to different environmental conditions. We show that DDN assimilation strongly varied with the corals’ metabolic status or with phosphate availability in the water. The very autotrophic shallow-water (~5 m) corals showed low or no DDN assimilation, which significantly increased under elevated phosphate availability (3 µM). Corals that depended more on heterotrophy (i.e., bleached and deep-water [~45 m] corals) assimilated significantly more DDN, which contributed up to 15% of the corals’ N demand (compared to 1% in shallow corals). Furthermore, we demonstrate that a substantial part of the DDN assimilated by deep corals was likely obtained from heterotrophic feeding on fixed N compounds and/or diazotrophic cells in the mucus. Conversely, in shallow corals, the net release of mucus, rich in organic carbon compounds, likely enhanced diazotroph abundance and activity and thereby the release of fixed N to the pelagic and benthic reef community. Overall, our results suggest that DDN assimilation by corals varies according to the environmental conditions and is likely linked to the capacity of the coral to acquire nutrients from seawater. PMID:28074021</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4493122','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4493122"><span>Selective Impact of Disease on Coral Communities: Outbreak of White Syndrome Causes Significant Total Mortality of Acropora Plate Corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Hobbs, Jean-Paul A.; Frisch, Ashley J.; Newman, Stephen J.; Wakefield, Corey B.</p> <p>2015-01-01</p> <p>Coral diseases represent a significant and increasing threat to coral reefs. Among the most destructive diseases is White Syndrome (WS), which is increasing in distribution and prevalence throughout the Indo-Pacific. The aim of this study was to determine taxonomic and spatial patterns in mortality rates of corals following the 2008 outbreak of WS at Christmas Island in the eastern Indian Ocean. WS mainly affected Acropora plate corals and caused total mortality of 36% of colonies across all surveyed sites and depths. Total mortality varied between sites but was generally much greater in the shallows (0–96% of colonies at 5 m depth) compared to deeper waters (0–30% of colonies at 20 m depth). Site-specific mortality rates were a reflection of the proportion of corals affected by WS at each site during the initial outbreak and were predicted by the initial cover of live Acropora plate cover. The WS outbreak had a selective impact on the coral community. Following the outbreak, live Acropora plate coral cover at 5 m depth decreased significantly from 7.0 to 0.8%, while the cover of other coral taxa remained unchanged. Observations five years after the initial outbreak revealed that total Acropora plate cover remained low and confirmed that corals that lost all their tissue due to WS did not recover. These results demonstrate that WS represents a significant and selective form of coral mortality and highlights the serious threat WS poses to coral reefs in the Indo-Pacific. PMID:26147291</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5405933','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5405933"><span>A coral-algal phase shift in Mesoamerica not driven by changes in herbivorous fish abundance</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Fung, Tak; Garza-Pérez, Joaquín Rodrigo; Acosta-González, Gilberto; Bozec, Yves-Marie; Johnson, Craig R.</p> <p>2017-01-01</p> <p>Coral-algal phase shifts in which coral cover declines to low levels and is replaced by algae have often been documented on coral reefs worldwide. This has motivated coral reef management responses that include restriction and regulation of fishing, e.g. herbivorous fish species. However, there is evidence that eutrophication and sedimentation can be at least as important as a reduction in herbivory in causing phase shifts. These threats arise from coastal development leading to increased nutrient and sediment loads, which stimulate algal growth and negatively impact corals respectively. Here, we first present results of a dynamic process-based model demonstrating that in addition to overharvesting of herbivorous fish, bottom-up processes have the potential to precipitate coral-algal phase shifts on Mesoamerican reefs. We then provide an empirical example that exemplifies this on coral reefs off Mahahual in Mexico, where a shift from coral to algal dominance occurred over 14 years, during which there was little change in herbivore biomass but considerable development of tourist infrastructure. Our results indicate that coastal development can compromise the resilience of coral reefs and that watershed and coastal zone management together with the maintenance of functional levels of fish herbivory are critical for the persistence of coral reefs in Mesoamerica. PMID:28445546</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2005CorRe..24..384W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2005CorRe..24..384W"><span>Characterizing lesions in corals from American Samoa</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Work, T. M.; Rameyer, R. A.</p> <p>2005-11-01</p> <p>The study of coral disease has suffered from an absence of systematic approaches that are commonly used to determine causes of diseases in animals. There is a critical need to develop a standardized and portable nomenclature for coral lesions in the field and to incorporate more commonly available biomedical tools in coral disease surveys to determine the potential causes of lesions in corals. We characterized lesions in corals from American Samoa based on gross and microscopic morphology and classified them as discoloration, growth anomalies, or tissue loss. The most common microscopic finding in corals manifesting discoloration was the depletion of zooxanthellae, followed by necrosis, sometimes associated with invasive algae or fungi. The most common microscopic lesion in corals manifesting tissue loss was cell necrosis often associated with algae, fungi, or protozoa. Corals with growth anomaly had microscopic evidence of hyperplasia of gastrovascular canals, followed by necrosis associated with algae or metazoa (polychaete worms). Several species of apparently normal corals also had microscopic changes, including the presence of bacterial aggregates or crustacea in tissues. A single type of gross lesion (e.g., discoloration) could have different microscopic manifestations. This phenomenon underlines the importance of using microscopy to provide a more systematic description of coral lesions and to detect potential pathogens associated with these lesions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28445546','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28445546"><span>A coral-algal phase shift in Mesoamerica not driven by changes in herbivorous fish abundance.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Arias-González, Jesús Ernesto; Fung, Tak; Seymour, Robert M; Garza-Pérez, Joaquín Rodrigo; Acosta-González, Gilberto; Bozec, Yves-Marie; Johnson, Craig R</p> <p>2017-01-01</p> <p>Coral-algal phase shifts in which coral cover declines to low levels and is replaced by algae have often been documented on coral reefs worldwide. This has motivated coral reef management responses that include restriction and regulation of fishing, e.g. herbivorous fish species. However, there is evidence that eutrophication and sedimentation can be at least as important as a reduction in herbivory in causing phase shifts. These threats arise from coastal development leading to increased nutrient and sediment loads, which stimulate algal growth and negatively impact corals respectively. Here, we first present results of a dynamic process-based model demonstrating that in addition to overharvesting of herbivorous fish, bottom-up processes have the potential to precipitate coral-algal phase shifts on Mesoamerican reefs. We then provide an empirical example that exemplifies this on coral reefs off Mahahual in Mexico, where a shift from coral to algal dominance occurred over 14 years, during which there was little change in herbivore biomass but considerable development of tourist infrastructure. Our results indicate that coastal development can compromise the resilience of coral reefs and that watershed and coastal zone management together with the maintenance of functional levels of fish herbivory are critical for the persistence of coral reefs in Mesoamerica.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li class="active"><span>19</span></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_19 --> <div id="page_20" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li class="active"><span>20</span></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="381"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70159650','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70159650"><span>Characterizing lesions in corals from American Samoa</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Work, Thierry M.; Rameyer, Robert A.</p> <p>2005-01-01</p> <p>The study of coral disease has suffered from an absence of systematic approaches that are commonly used to determine causes of diseases in animals. There is a critical need to develop a standardized and portable nomenclature for coral lesions in the field and to incorporate more commonly available biomedical tools in coral disease surveys to determine the potential causes of lesions in corals. We characterized lesions in corals from American Samoa based on gross and microscopic morphology and classified them as discoloration, growth anomalies, or tissue loss. The most common microscopic finding in corals manifesting discoloration was the depletion of zooxanthellae, followed by necrosis, sometimes associated with invasive algae or fungi. The most common microscopic lesion in corals manifesting tissue loss was cell necrosis often associated with algae, fungi, or protozoa. Corals with growth anomaly had microscopic evidence of hyperplasia of gastrovascular canals, followed by necrosis associated with algae or metazoa (polychaete worms). Several species of apparently normal corals also had microscopic changes, including the presence of bacterial aggregates or crustacea in tissues. A single type of gross lesion (e.g., discoloration) could have different microscopic manifestations. This phenomenon underlines the importance of using microscopy to provide a more systematic description of coral lesions and to detect potential pathogens associated with these lesions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/1003772','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/1003772"><span>Evaluating coral reef health in American Samoa</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Work, Thierry M.; Rameyer, Robert A.</p> <p>2005-01-01</p> <p>The study of coral disease has suffered from an absence of systematic approaches that are commonly used to determine causes of diseases in animals. There is a critical need to develop a standardized and portable nomenclature for coral lesions in the field and to incorporate more commonly available biomedical tools in coral disease surveys to determine the potential causes of lesions in corals. We characterized lesions in corals from American Samoa based on gross and microscopic morphology and classified them as discoloration, growth anomalies, or tissue loss. The most common microscopic finding in corals manifesting discoloration was the depletion of zooxanthellae, followed by necrosis, sometimes associated with invasive algae or fungi. The most common microscopic lesion in corals manifesting tissue loss was cell necrosis often associated with algae, fungi, or protozoa. Corals with growth anomaly had microscopic evidence of hyperplasia of gastrovascular canals, followed by necrosis associated with algae or metazoa (polychaete worms). Several species of apparently normal corals also had microscopic changes, including the presence of bacterial aggregates or crustacea in tissues. A single type of gross lesion (e.g., discoloration) could have different microscopic manifestations. This phenomenon underlines the importance of using microscopy to provide a more systematic description of coral lesions and to detect potential pathogens associated with these lesions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70038515','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70038515"><span>Bacterial communities associated with healthy and Acropora white syndrome-affected corals from American Samoa</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Wilson, Bryan; Aeby, Greta S.; Work, Thierry M.; Bourne, David G.</p> <p>2012-01-01</p> <p>Acropora white syndrome (AWS) is characterized by rapid tissue loss revealing the white underlying skeleton and affects corals worldwide; however, reports of causal agents are conflicting. Samples were collected from healthy and diseased corals and seawater around American Samoa and bacteria associated with AWS characterized using both culture-dependent and culture-independent methods, from coral mucus and tissue slurries, respectively. Bacterial 16S rRNA gene clone libraries derived from coral tissue were dominated by the Gammaproteobacteria, and Jaccard's distances calculated between the clone libraries showed that those from diseased corals were more similar to each other than to those from healthy corals. 16S rRNA genes from 78 culturable coral mucus isolates also revealed a distinct partitioning of bacterial genera into healthy and diseased corals. Isolates identified as Vibrionaceae were further characterized by multilocus sequence typing, revealing that whilst several Vibrio spp. were found to be associated with AWS lesions, a recently described species, Vibrio owensii, was prevalent amongst cultured Vibrio isolates. Unaffected tissues from corals with AWS had a different microbiota than normal Acropora as found by others. Determining whether a microbial shift occurs prior to disease outbreaks will be a useful avenue of pursuit and could be helpful in detecting prodromal signs of coral disease prior to manifestation of lesions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25473004','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25473004"><span>Large-amplitude internal waves benefit corals during thermal stress.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Wall, M; Putchim, L; Schmidt, G M; Jantzen, C; Khokiattiwong, S; Richter, C</p> <p>2015-01-22</p> <p>Tropical scleractinian corals are particularly vulnerable to global warming as elevated sea surface temperatures (SSTs) disrupt the delicate balance between the coral host and their algal endosymbionts, leading to symbiont expulsion, mass bleaching and mortality. While satellite sensing of SST has proved a reliable predictor of coral bleaching at the regional scale, there are large deviations in bleaching severity and mortality on the local scale that are poorly understood. Here, we show that internal waves play a major role in explaining local coral bleaching and mortality patterns in the Andaman Sea. Despite a severe region-wide SST anomaly in May 2010, frequent upslope intrusions of cold sub-pycnocline waters due to breaking large-amplitude internal waves (LAIW) mitigated coral bleaching and mortality in shallow waters. In LAIW-sheltered waters, by contrast, bleaching-susceptible species suffered severe bleaching and total mortality. These findings suggest that LAIW benefit coral reefs during thermal stress and provide local refugia for bleaching-susceptible corals. LAIW are ubiquitous in tropical stratified waters and their swash zones may thus be important conservation areas for the maintenance of coral diversity in a warming climate. Taking LAIW into account can significantly improve coral bleaching predictions and provide a valuable tool for coral reef conservation and management. © 2014 The Author(s) Published by the Royal Society. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016NatSR...618637V','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016NatSR...618637V"><span>Allelopathic interactions between the brown algal genus Lobophora (Dictyotales, Phaeophyceae) and scleractinian corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Vieira, Christophe; Thomas, Olivier P.; Culioli, Gérald; Genta-Jouve, Grégory; Houlbreque, Fanny; Gaubert, Julie; de Clerck, Olivier; Payri, Claude E.</p> <p>2016-01-01</p> <p>Allelopathy has been recently suggested as a mechanism by which macroalgae may outcompete corals in damaged reefs. Members of the brown algal genus Lobophora are commonly observed in close contact with scleractinian corals and have been considered responsible for negative effects of macroalgae to scleractinian corals. Recent field assays have suggested the potential role of chemical mediators in this interaction. We performed in situ bioassays testing the allelopathy of crude extracts and isolated compounds of several Lobophora species, naturally associated or not with corals, against four corals in New Caledonia. Our results showed that, regardless of their natural association with corals, organic extracts from species of the genus Lobophora are intrinsically capable of bleaching some coral species upon direct contact. Additionally, three new C21 polyunsaturated alcohols named lobophorenols A-C (1-3) were isolated and identified. Significant allelopathic effects against Acropora muricata were identified for these compounds. In situ observations in New Caledonia, however, indicated that while allelopathic interactions are likely to occur at the macroalgal-coral interface, Lobophora spp. rarely bleached their coral hosts. These findings are important toward our understanding of the importance of allelopathy versus other processes such as herbivory in the interaction between macroalgae and corals in reef ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26728003','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26728003"><span>Allelopathic interactions between the brown algal genus Lobophora (Dictyotales, Phaeophyceae) and scleractinian corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Vieira, Christophe; Thomas, Olivier P; Culioli, Gérald; Genta-Jouve, Grégory; Houlbreque, Fanny; Gaubert, Julie; De Clerck, Olivier; Payri, Claude E</p> <p>2016-01-05</p> <p>Allelopathy has been recently suggested as a mechanism by which macroalgae may outcompete corals in damaged reefs. Members of the brown algal genus Lobophora are commonly observed in close contact with scleractinian corals and have been considered responsible for negative effects of macroalgae to scleractinian corals. Recent field assays have suggested the potential role of chemical mediators in this interaction. We performed in situ bioassays testing the allelopathy of crude extracts and isolated compounds of several Lobophora species, naturally associated or not with corals, against four corals in New Caledonia. Our results showed that, regardless of their natural association with corals, organic extracts from species of the genus Lobophora are intrinsically capable of bleaching some coral species upon direct contact. Additionally, three new C21 polyunsaturated alcohols named lobophorenols A-C (1-3) were isolated and identified. Significant allelopathic effects against Acropora muricata were identified for these compounds. In situ observations in New Caledonia, however, indicated that while allelopathic interactions are likely to occur at the macroalgal-coral interface, Lobophora spp. rarely bleached their coral hosts. These findings are important toward our understanding of the importance of allelopathy versus other processes such as herbivory in the interaction between macroalgae and corals in reef ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28446691','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28446691"><span>Key functional role of the optical properties of coral skeletons in coral ecology and evolution.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Enríquez, Susana; Méndez, Eugenio R; Hoegh-Guldberg, Ove; Iglesias-Prieto, Roberto</p> <p>2017-04-26</p> <p>Multiple scattering of light on coral skeleton enhances light absorption efficiency of coral symbionts and plays a key role in the regulation of their internal diffuse light field. To understand the dependence of this enhancement on skeleton meso- and macrostructure, we analysed the scattering abilities of naked coral skeletons for 74 Indo-Pacific species. Sensitive morphotypes to thermal and light stress, flat-extraplanate and branching corals, showed the most efficient structures, while massive-robust species were less efficient. The lowest light-enhancing scattering abilities were found for the most primitive colonial growth form: phaceloid. Accordingly, the development of highly efficient light-collecting structures versus the selection of less efficient but more robust holobionts to cope with light stress may constitute a trade-off in the evolution of modern symbiotic scleractinian corals, characterizing two successful adaptive solutions. The coincidence of the most important structural modifications with epitheca decline supports the importance of the enhancement of light transmission across coral skeleton in modern scleractinian diversification, and the central role of these symbioses in the design and optimization of coral skeleton. Furthermore, the same ability that lies at the heart of the success of symbiotic corals as coral-reef-builders can also explain the 'Achilles's heel' of these symbioses in a warming ocean. © 2017 The Author(s).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27512146','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27512146"><span>Evidence for water-mediated mechanisms in coral-algal interactions.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Jorissen, Hendrikje; Skinner, Christina; Osinga, Ronald; de Beer, Dirk; Nugues, Maggy M</p> <p>2016-08-17</p> <p>Although many coral reefs have shifted from coral-to-algal dominance, the consequence of such a transition for coral-algal interactions and their underlying mechanisms remain poorly understood. At the microscale, it is unclear how diffusive boundary layers (DBLs) and surface oxygen concentrations at the coral-algal interface vary with algal competitors and competitiveness. Using field observations and microsensor measurements in a flow chamber, we show that coral (massive Porites) interfaces with thick turf algae, macroalgae, and cyanobacteria, which are successful competitors against coral in the field, are characterized by a thick DBL and hypoxia at night. In contrast, coral interfaces with crustose coralline algae, conspecifics, and thin turf algae, which are poorer competitors, have a thin DBL and low hypoxia at night. Furthermore, DBL thickness and hypoxia at the interface with turf decreased with increasing flow speed, but not when thick turf was upstream. Our results support the importance of water-mediated transport mechanisms in coral-algal interactions. Shifts towards algal dominance, particularly dense assemblages, may lead to thicker DBLs, higher hypoxia, and higher concentrations of harmful metabolites and pathogens along coral borders, which in turn may facilitate algal overgrowth of live corals. These effects may be mediated by flow speed and orientation. © 2016 The Author(s).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27690185','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27690185"><span>Structure and temporal dynamics of the bacterial communities associated to microhabitats of the coral Oculina patagonica.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rubio-Portillo, Esther; Santos, Fernando; Martínez-García, Manuel; de Los Ríos, Asunción; Ascaso, Carmen; Souza-Egipsy, Virginia; Ramos-Esplá, Alfonso A; Anton, Josefa</p> <p>2016-12-01</p> <p>Corals are known to contain a diverse microbiota that plays a paramount role in the physiology and health of holobiont. However, few studies have addressed the variability of bacterial communities within the coral host. In this study, bacterial community composition from the mucus, tissue and skeleton of the scleractinian coral Oculina patagonica were investigated seasonally at two locations in the Western Mediterranean Sea, to further understand how environmental conditions and the coral microbiome structure are related. We used denaturing gradient gel electrophoresis in combination with next-generation sequencing and electron microscopy to characterize the bacterial community. The bacterial communities were significantly different among coral compartments, and coral tissue displayed the greatest changes related to environmental conditions and coral health status. Species belonging to the Rhodobacteraceae and Vibrionaceae families form part of O. patagonica tissues core microbiome and may play significant roles in the nitrogen cycle. Furthermore, sequences related to the coral pathogens, Vibrio mediterranei and Vibrio coralliilyticus, were detected not only in bleached corals but also in healthy ones, even during cold months. This fact opens a new view onto unveiling the role of pathogens in the development of coral diseases in the future. © 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://pubs.usgs.gov/ofr/2016/1182/ofr20161182.pdf','USGSPUBS'); return false;" href="http://pubs.usgs.gov/ofr/2016/1182/ofr20161182.pdf"><span>Collection methods and descriptions of coral cores extracted from massive corals in Dry Tortugas National Park, Florida, U.S.A.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Weinzierl, Michael S.; Reich, Christopher D.; Hickey, T. Donald; Bartlett, Lucy A.; Kuffner, Ilsa B.</p> <p>2016-11-29</p> <p>Cores from living coral colonies were collected from Dry Tortugas National Park, Florida, U.S.A., to obtain skeletal records of past coral growth and allow geochemical reconstruction of environmental variables during the corals’ centuries-long lifespans. The samples were collected as part of the U.S. Geological Survey Coral Reef Ecosystems Studies project (http:/coastal.er.usgs.gov/crest) that provides science to assist resource managers tasked with the stewardship of coral reef resources. Three colonies each of the coral species Orbicella faveolata and Siderastrea siderea were collected in May 2012 using the methods described herein and as approved under National Park Service scientific collecting permit number DRTO-2012-SCI-0001 and are cataloged under accession number DRTO-353. These coral samples can be used to retroactively construct environmental parameters, including sea-surface temperature, by measuring the elemental composition of the coral skeleton. The cores described here, and others (see http://olga.er.usgs.gov/coreviewer/), can be requested, on loan, for scientific study. Photographic images for each coral in its ocean environment, the coral cores as curated and slabbed, and the X-rays of the slabs can be found in an associated U.S. Geological Survey Data Release.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28391465','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28391465"><span>Resilience potential of an Indian Ocean reef: an assessment through coral recruitment pattern and survivability of juvenile corals to recurrent stress events.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Manikandan, Balakrishnan; Ravindran, Jeyaraman; Vidya, Pottekkatt Jayabalan; Shrinivasu, Selvaraju; Manimurali, Rajagopal; Paramasivam, Kaliyaperumal</p> <p>2017-05-01</p> <p>Coral reefs are degraded by the synergistic action of climate and anthropogenic stressors. Coral cover in the Palk Bay reef at the northern Indian Ocean largely declined in the past decade due to frequent bleaching events, tsunami and increased fishing activities. In this study, we carried out a comparative assessment to assess the differences in the recovery and resilience of three spatially distant reefs viz. Vedhalai, Mandapam and Pamban along Palk Bay affected by moderate, severe and low fishing pressure respectively. The assessment was based on the juvenile coral recruitment pattern and its survivability combined with availability of hard substratum, live coral cover and herbivore reef fish stock. The Vedhalai reef has the highest coral cover (14.6 ± 6.3%), and ≥90% of the live corals in Vedhalai and Mandapam were affected by turf algal overgrowth. The density of herbivore reef fish was low in Vedhalai and Mandapam reefs compared to the Pamban reef with relatively few grazing species. The juvenile coral diversity and density were high in the Pamban reef and low in Vedhalai and Mandapam reefs despite high hard substratum cover. In total, 22 species of juvenile corals of 10 genera were recorded in Palk Bay. Comparison of the species diversity of juvenile corals with adult ones suggested that the Pamban reef is connected with other distant reefs whereas Vedhalai and Mandapam reefs were self-seeded. There was no statistically significant difference in the survivability of juvenile corals between the study sites, and in total, ≥90% of the juvenile corals survived the high sedimentation stress triggered by the northeast monsoon and bleaching stress that occurred recurrently. Our results indicated that the human activities indirectly affected the juvenile coral recruitment by degrading the live coral cover and contributed to the spatial variation in the recovery and resilience of the Palk Bay reef. Low species diversity of the juvenile corals will increase the vulnerability of the Palk Bay reef to species-specific endemic threats.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2009EGUGA..11.8536D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2009EGUGA..11.8536D"><span>Application of medical X-ray computed tomography in the study of cold-water carbonate mounds</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>de Mol, L.; Pirlet, H.; van Rooij, D.; Blamart, D.; Cnudde, V.; Duyck, P.; Houbrechts, H.; Jacobs, P.; Henriet, J.-P.; Dufresne 169 Shipboard Party, The Marion</p> <p>2009-04-01</p> <p>During the R/V Marion Dufresne 169 'MiCROSYSTEMS' cruise (July 2008) to the El Arraiche mud volcano field in the Gulf of Cadiz cold-water coral mounds were targeted. Four on-mound gravity cores, with a total length of 17.5 m, were obtained for sedimentological and palaeoceanographic analyses in order to unveil the history of the uppermost meters of these cold-water coral build-ups. In parallel, four on-mound cores were taken on approximately the same location for microbiological and biogeochemical analyses. By comparing and correlating both results, more information can be revealed about the processes acting in the dead coral rubble fields which cover these mounds. Computed X-ray tomography (CT) was used for the identification and quantification of the corals inside the gravity cores. Furthermore, this technique is also useful for the investigation of sedimentological features, i.e. bioturbation, porosity, laminations... In this study, cores were scanned using a medical CT scanner on a relative high resolution which allows the three-dimensional visualization of the corals and sedimentological features. Slices were taken every 3 mm with an overlap of 1 mm. Based on these data it was possible to delineate different "CT" facies within the cores. On one hand there are intervals with a high amount of corals and on the other hand zones with a very low amount of corals or even no corals at all. In the first case two different facies can be distinguished: one facies with clearly recognizable, well preserved corals, and the second facies with crushed coral fragments. In both facies the corals are embedded in a homogenous matrix. Different facies could also be defined in the intervals containing little or no corals. For example, a homogenous facies with bioturbations and/or cracks. Also an important observation is the presence of pyrite which appears in all cores at a certain depth. Sometimes the pyrite could be observed in bioturbations or inside the corals. Besides that also the percentage of corals in these gravity cores were quantified using the "Morpho+" software, which was developed at the UGCT (Centre for X-ray Tomography, Ghent University, Belgium). Based on these results, a clear difference can be noticed between the four mounds. On Conger cliff, corals were only observed in the upper 34 cm while in the other locations corals can be found throughout the entire core with significant variations in the amount of corals. Finally, it was possible to identify different species of cold-water corals, namely Lophelia pertusa, Madrepora oculata, Desmophyllum cristagalli and Dendrophyllia. In conjunction with dating and palaeoenvironmental analyses of the corals and the sediment matrix, this can yield valuable information about the build-up of these cold-water coral mounds in the El Arraiche mud volcano field and the palaeoenvironmental characteristics at the time the corals were living.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2014-title50-vol12/pdf/CFR-2014-title50-vol12-sec622-1.pdf','CFR2014'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2014-title50-vol12/pdf/CFR-2014-title50-vol12-sec622-1.pdf"><span>50 CFR 622.1 - Purpose and scope.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2014&page.go=Go">Code of Federal Regulations, 2014 CFR</a></p> <p></p> <p>2014-10-01</p> <p>... for Coral, Coral Reefs, and Live/Hard Bottom Habitats of the South Atlantic Region SAFMC South Atlantic.5 FMP for Coral and Coral reefs of the Gulf of Mexico GMFMC Gulf. FMP for Corals and Reef... CFMC Caribbean. FMP for the Red Drum Fishery of the Gulf of Mexico GMFMC Gulf.1 FMP for the Reef Fish...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2013-title50-vol12/pdf/CFR-2013-title50-vol12-sec622-1.pdf','CFR2013'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2013-title50-vol12/pdf/CFR-2013-title50-vol12-sec622-1.pdf"><span>50 CFR 622.1 - Purpose and scope.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2013&page.go=Go">Code of Federal Regulations, 2013 CFR</a></p> <p></p> <p>2013-10-01</p> <p>... for Coral, Coral Reefs, and Live/Hard Bottom Habitats of the South Atlantic Region SAFMC South Atlantic.5 FMP for Coral and Coral reefs of the Gulf of Mexico GMFMC Gulf. FMP for Corals and Reef... CFMC Caribbean. FMP for the Red Drum Fishery of the Gulf of Mexico GMFMC Gulf.1 FMP for the Reef Fish...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2012-title50-vol12/pdf/CFR-2012-title50-vol12-sec622-1.pdf','CFR2012'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2012-title50-vol12/pdf/CFR-2012-title50-vol12-sec622-1.pdf"><span>50 CFR 622.1 - Purpose and scope.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2012&page.go=Go">Code of Federal Regulations, 2012 CFR</a></p> <p></p> <p>2012-10-01</p> <p>.../SAFMC Gulf 1, Mid-Atlantic 1 and South Atlantic 1, FMP for Coral and Coral Reefs of the Gulf of Mexico GMFMC Gulf. FMP for Coral, Coral Reefs, and Live/Hard Bottom Habitats of the South Atlantic Region SAFMC South Atlantic5. FMP for Corals and Reef Associated Plants and Invertebrates of Puerto Rico and the U.S...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70120931','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70120931"><span>Coral microbiology</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Rosenberg, Eugene; Kellogg, Christina A.; Rohwer, Forest</p> <p>2007-01-01</p> <p>In the last 30 years, there has been approximately a 30% loss of corals worldwide, largely due to emerging diseases (Harvell et al., 2002, 2007; Hughes et al., 2003). Coral microbiology is a new field, driven largely by a desire to understand the interactions between corals and their symbiotic microorganisms and to use this knowledge to eventually prevent the spread of coral diseases.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016SPIE.9878E..11N','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016SPIE.9878E..11N"><span>Spectral classifying base on color of live corals and dead corals covered with algae</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Nurdin, Nurjannah; Komatsu, Teruhisa; Barille, Laurent; Akbar, A. S. M.; Sawayama, Shuhei; Fitrah, Muh. Nur; Prasyad, Hermansyah</p> <p>2016-05-01</p> <p>Pigments in the host tissues of corals can make a significant contribution to their spectral signature and can affect their apparent color as perceived by a human observer. The aim of this study is classifying the spectral reflectance of corals base on different color. It is expected that they can be used as references in discriminating between live corals, dead coral covered with algae Spectral reflectance data was collected in three small islands, Spermonde Archipelago, Indonesia by using a hyperspectral radiometer underwater. First and second derivative analysis resolved the wavelength locations of dominant features contributing to reflectance in corals and support the distinct differences in spectra among colour existed. Spectral derivative analysis was used to determine the specific wavelength regions ideal for remote identification of substrate type. The analysis results shown that yellow, green, brown and violet live corals are spectrally separable from each other, but they are similar with dead coral covered with algae spectral.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24768171','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24768171"><span>Impact of sea-level rise and coral mortality on the wave dynamics and wave forces on barrier reefs.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Baldock, T E; Golshani, A; Callaghan, D P; Saunders, M I; Mumby, P J</p> <p>2014-06-15</p> <p>A one-dimensional wave model was used to investigate the reef top wave dynamics across a large suite of idealized reef-lagoon profiles, representing barrier coral reef systems under different sea-level rise (SLR) scenarios. The modeling shows that the impacts of SLR vary spatially and are strongly influenced by the bathymetry of the reef and coral type. A complex response occurs for the wave orbital velocity and forces on corals, such that the changes in the wave dynamics vary reef by reef. Different wave loading regimes on massive and branching corals also leads to contrasting impacts from SLR. For many reef bathymetries, wave orbital velocities increase with SLR and cyclonic wave forces are reduced for certain coral species. These changes may be beneficial to coral health and colony resilience and imply that predicting SLR impacts on coral reefs requires careful consideration of the reef bathymetry and the mix of coral species. Copyright © 2014 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22944243','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22944243"><span>Unseen players shape benthic competition on coral reefs.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Barott, Katie L; Rohwer, Forest L</p> <p>2012-12-01</p> <p>Recent work has shown that hydrophilic and hydrophobic organic matter (OM) from algae disrupts the function of the coral holobiont and promotes the invasion of opportunistic pathogens, leading to coral morbidity and mortality. Here we refer to these dynamics as the (3)DAM [dissolved organic matter (DOM), direct contact, disease, algae and microbes] model. There is considerable complexity in coral-algae interactions; turf algae and macroalgae promote heterotrophic microbial overgrowth of coral, macroalgae also directly harm the corals via hydrophobic OM, whereas crustose coralline algae generally encourage benign microbial communities. In addition, complex flow patterns transport OM and pathogens from algae to downstream corals, and direct algal contact enhances their delivery. These invisible players (microbes, viruses, and OM) are important drivers of coral reefs because they have non-linear responses to disturbances and are the first to change in response to perturbations, providing near real-time trajectories for a coral reef, a vital metric for conservation and restoration. Copyright © 2012 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24307674','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24307674"><span>Evidence of photosymbiosis in Palaeozoic tabulate corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Zapalski, Mikolaj K</p> <p>2014-01-22</p> <p>Coral reefs form the most diverse of all marine ecosystems on the Earth. Corals are among their main components and owe their bioconstructing abilities to a symbiosis with algae (Symbiodinium). The coral-algae symbiosis had been traced back to the Triassic (ca 240 Ma). Modern reef-building corals (Scleractinia) appeared after the Permian-Triassic crisis; in the Palaeozoic, some of the main reef constructors were extinct tabulate corals. The calcium carbonate secreted by extant photosymbiotic corals bears characteristic isotope (C and O) signatures. The analysis of tabulate corals belonging to four orders (Favositida, Heliolitida, Syringoporida and Auloporida) from Silurian to Permian strata of Europe and Africa shows these characteristic carbon and oxygen stable isotope signatures. The δ(18)O to δ(13)C ratios in recent photosymbiotic scleractinians are very similar to those of Palaeozoic tabulates, thus providing strong evidence of such symbioses as early as the Middle Silurian (ca 430 Ma). Corals in Palaeozoic reefs used the same cellular mechanisms for carbonate secretion as recent reefs, and thus contributed to reef formation.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li class="active"><span>20</span></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_20 --> <div id="page_21" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li class="active"><span>21</span></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="401"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27889075','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27889075"><span>Abundance and composition of juvenile corals reveals divergent trajectories for coral assemblages across the United Arab Emirates.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pratchett, Morgan S; Baird, Andrew H; Bauman, Andrew G; Burt, John A</p> <p>2017-01-30</p> <p>Marked shifts in the composition of coral assemblages are occurring at many locations, but it is unknown whether these are permanent shifts reinforced by patterns of population replenishment. This study examined the composition of juvenile coral assemblages across the United Arab Emirates (UAE). Densities of juvenile corals varied significantly among locations, but were highest where coral cover was highest. Juvenile coral assemblages within the Persian Gulf were dominated by Porites, while no Acropora were recorded. We expect therefore, continued declines in Acropora abundance, while observed dominance of Porites is likely to persist. In the Oman Sea, Pocillopora was the dominant juvenile coral, with Acropora and Stylophora also recorded. This study shows that taxonomic differences in replenishment are reinforcing temporal shifts in coral composition within the southern Persian Gulf, but not in the Oman Sea. Differences in environmental conditions and disturbance regimes likely explain the divergent responses between regions. Copyright © 2016 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4899628','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4899628"><span>Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Zaneveld, Jesse R.; Burkepile, Deron E.; Shantz, Andrew A.; Pritchard, Catharine E.; McMinds, Ryan; Payet, Jérôme P.; Welsh, Rory; Correa, Adrienne M. S.; Lemoine, Nathan P.; Rosales, Stephanie; Fuchs, Corinne; Maynard, Jeffrey A.; Thurber, Rebecca Vega</p> <p>2016-01-01</p> <p>Losses of corals worldwide emphasize the need to understand what drives reef decline. Stressors such as overfishing and nutrient pollution may reduce resilience of coral reefs by increasing coral–algal competition and reducing coral recruitment, growth and survivorship. Such effects may themselves develop via several mechanisms, including disruption of coral microbiomes. Here we report the results of a 3-year field experiment simulating overfishing and nutrient pollution. These stressors increase turf and macroalgal cover, destabilizing microbiomes, elevating putative pathogen loads, increasing disease more than twofold and increasing mortality up to eightfold. Above-average temperatures exacerbate these effects, further disrupting microbiomes of unhealthy corals and concentrating 80% of mortality in the warmest seasons. Surprisingly, nutrients also increase bacterial opportunism and mortality in corals bitten by parrotfish, turning normal trophic interactions deadly for corals. Thus, overfishing and nutrient pollution impact reefs down to microbial scales, killing corals by sensitizing them to predation, above-average temperatures and bacterial opportunism. PMID:27270557</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014CorRe..33..891B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014CorRe..33..891B"><span>Local extinction of a coral reef fish explained by inflexible prey choice</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Brooker, R. M.; Munday, P. L.; Brandl, S. J.; Jones, G. P.</p> <p>2014-12-01</p> <p>While global extinctions of marine species are infrequent, local extinctions are becoming common. However, the role of habitat degradation and resource specialisation in explaining local extinction is unknown. On coral reefs, coral bleaching is an increasingly frequent cause of coral mortality that can result in dramatic changes to coral community composition. Coral-associated fishes are often specialised on a limited suite of coral species and are therefore sensitive to these changes. This study documents the local extinction of a corallivorous reef fish, Oxymonacanthus longirostris, following a mass bleaching event that altered the species composition of associated coral communities. Local extinction only occurred on reefs that also completely lost a key prey species, Acropora millepora, even though coral cover remained high. In an experimental test, fish continued to select bleached A. millepora over the healthy, but less-preferred prey species that resisted bleaching. These results suggest that behavioural inflexibility may limit the ability of specialists to cope with even subtle changes to resource availability.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/5643270-bacterial-populations-adaptations-mucus-layers-living-corals','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/5643270-bacterial-populations-adaptations-mucus-layers-living-corals"><span>Bacterial populations and adaptations in the mucus layers on living corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Ducklow, H.W.; Mitchell, R.</p> <p>1979-07-01</p> <p>The external mucus layers of the stony coral Porites astreoides and the soft corals Palythoa sp. and Heteroxenia fuscesens are inhabited by communities of marine heterotrophic bacteria. Population levels of bacteria in coral mucus may be regulated by the self-cleaning behavior of the host. Bacterial populations in coral mucus respond to stresses applied to the host coral by growing to higher population levels in the mucus, indicating that these are populations of viable organisms closely attuned to host metabolism. Members of these microbial populations utilize the mucus compounds and may play a role in processing coral mucus for reef detritusmore » feeders. One such species, Vibrio alginolyticus, grows rapidly on Heteroxenia mucus, is attracted to dissolved mucus, and possesses a mechanism to maintain itself on the coral surface.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2010CorRe..29...93H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2010CorRe..29...93H"><span>Seasonal monitoring of coral-algae interactions in fringing reefs of the Gulf of Aqaba, Northern Red Sea</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Haas, A.; El-Zibdah, M.; Wild, C.</p> <p>2010-03-01</p> <p>This paper presents seasonal in situ monitoring data on benthic coverage and coral -algae interactions in high-latitude fringing reefs of the Northern Red Sea over a period of 19 months. More than 30% of all hermatypic corals were involved in interaction with benthic reef algae during winter compared to 17% during summer, but significant correlation between the occurrence of coral -algae interactions and monitored environmental factors such as temperature and inorganic nutrient availability was not detected. Between 5 and 10-m water depth, the macroalgae Caulerpa serrulata, Peyssonnelia capensis and filamentous turf algae represented almost 100% of the benthic algae involved in interaction with corals. Turf algae were most frequently (between 77 and 90% of all interactions) involved in interactions with hermatypic corals and caused most tissue damage to them. Maximum coral tissue loss of 0.75% day-1 was observed for Acropora-turf algae interaction during fall, while an equilibrium between both groups of organisms appeared during summer. Slow-growing massive corals were more resistant against negative algal influence than fast-growing branching corals. Branching corals of the genus Acropora partly exhibited a newly observed phenotypic plasticity mechanism, by development of a bulge towards the competing organism, when in interaction with algae. These findings may contribute to understand the dynamics of phase shifts in coral reefs by providing seasonally resolved in situ monitoring data on the abundance and the competitive dynamic of coral -algae interactions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2009IJEaS..98..885D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2009IJEaS..98..885D"><span>Cold-water coral banks and submarine landslides: a review</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>de Mol, Ben; Huvenne, Veerle; Canals, Miquel</p> <p>2009-06-01</p> <p>This paper aims to review the relation between cold-water coral bank development and submarine landslides. Both are common features on continental margins, but so far it has not been reviewed which effect—if at all—they may have upon each other. Indirect and direct relations between coral banks and landslides are evaluated here, based on four case studies: the Magellan Mound Province in the Porcupine Seabight, where fossil coral banks appear partly on top of a buried slide deposit; the Sula Ridge Reef Complex and the Storegga landslide both off mid-Norway; and the Mauritania coral bank province, associated with the Mauritanian Slide Complex. For each of these locations, positive and negative relationships between both features are discussed, based on available datasets. Locally submarine landslides might directly favour coral bank development by creating substratum where corals can settle on, enhancing turbulence due to abrupt seabed morphological variations and, in some cases, causing fluid seepage. In turn, some of these processes may contribute to increased food availability and lower sedimentation rates. Landslides can also affect coral bank development by direct erosion of the coral banks, and by the instantaneous increase of turbidity, which may smother the corals. On the other hand, coral banks might have a stabilising function and delay or stop the headwall retrogradation of submarine landslides. Although local relationships can be deduced from these case studies, no general and direct relationship exists between submarine landslides and cold-water coral banks.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35..765S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35..765S"><span>Understanding the murky history of the Coral Triangle: Miocene corals and reef habitats in East Kalimantan (Indonesia)</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Santodomingo, Nadiezhda; Renema, Willem; Johnson, Kenneth G.</p> <p>2016-09-01</p> <p>Studies on ancient coral communities living in marginal conditions, including low light, high turbidity, extreme temperatures, or high nutrients, are important to understand the current structure of reefs and how they could potentially respond to global changes. The main goal of this study was to document the rich and well-preserved fossil coral fauna preserved in Miocene exposures of the Kutai Basin in East Kalimantan, Indonesia. Our collections include almost forty thousand specimens collected from 47 outcrops. Seventy-nine genera and 234 species have been identified. Three different coral assemblages were found corresponding to small patch reefs that developed under the influence of high siliciclastic inputs from the Mahakam Delta. Coral assemblages vary in richness, structure, and composition. Platy coral assemblages were common until the Serravallian (Middle Miocene), while branching coral assemblages became dominant in the Tortonian (Late Miocene). By the late Tortonian massive coral assemblages dominated, similar to modern-style coral framework. Our results suggest that challenging habitats, such as the Miocene turbid habitats of East Kalimantan, might have played an important role during the early diversification of the Coral Triangle by hosting a pool of resilient species more likely to survive the environmental changes that have affected this region since the Cenozoic. Further research that integrates fossil and recent turbid habitats may provide a glimpse into the dynamics and future of coral reefs as "typical" clear-water reefs continue to decline in most regions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70029212','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70029212"><span>A model for wave control on coral breakage and species distribution in the Hawaiian Islands</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Storlazzi, C.D.; Brown, E.K.; Field, M.E.; Rodgers, K.; Jokiel, P.L.</p> <p>2005-01-01</p> <p>The fringing reef off southern Molokai, Hawaii, is currently being studied as part of a multi-disciplinary project led by the US Geological Survey. As part of this study, modeling and field observations were utilized to help understand the physical controls on reef morphology and the distribution of different coral species. A model was developed that calculates wave-induced hydrodynamic forces on corals of a specific form and mechanical strength. From these calculations, the wave conditions under which specific species of corals would either be stable or would break due to the imposed wave-induced forces were determined. By combining this hydrodynamic force-balance model with various wave model output for different oceanographic conditions experienced in the study area, we were able to map the locations where specific coral species should be stable (not subject to frequent breakage) in the study area. The combined model output was then compared with data on coral species distribution and coral cover at 12 sites along Molokai's south shore. Observations and modeling suggest that the transition from one coral species to another may occur when the ratio of the coral colony's mechanical strengths to the applied (wave-induced) forces may be as great as 5:1, and not less than 1:1 when corals would break. This implies that coral colony's mechanical strength and wave-induced forces may be important in defining gross coral community structure over large (orders of 10's of meters) spatial scales. ?? Springer-Verlag 2004.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23063708','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23063708"><span>The northernmost coral frontier of the Maldives: The coral reefs of Ihavandippolu Atoll under long-term environmental change.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Tkachenko, Konstantin S</p> <p>2012-12-01</p> <p>Ihavandippolu, the northernmost atoll of the Maldives, experienced severe coral bleaching and mortality in 1998 followed by several bleaching episodes in the last decade. Coral cover in the 11 study sites surveyed in July-December of 2011 in the 3-5 m depth range varied from 1.7 to 51%. Reefs of the islands located in the center of Ihavandippolu lagoon have exhibited a very low coral recovery since 1998 and remain mostly degraded 12 years after the impact. At the same time, some reefs, especially in the inner part of the eastern ring of the atoll, demonstrate a high coral cover (>40%) with a dominance of branching Acropora that is known to be one of the coral genera that is most susceptible to thermal stress. The last severe bleaching event in 2010 resulted in high coral mortality in some sites of the atoll. Differences in coral mortality rates and proportion between "susceptible" and "resistant" taxa in study sites are apparently related to long-term adaptation and local hydrological features that can mitigate thermal impacts. Abundant herbivorous fish observed in the atoll prevent coral overgrowth by macroalgae even on degraded reefs. Despite the frequent influence of temperature anomalies and having less geomorphologic refuges for coral survivals than other larger Maldivian atolls, a major part of observed coral communities in Ihavandippolu Atoll exhibits high resilience and potential for further acclimatization to a changing environment. Copyright © 2012 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3726730','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3726730"><span>Dynamic Stability of Coral Reefs on the West Australian Coast</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Speed, Conrad W.; Babcock, Russ C.; Bancroft, Kevin P.; Beckley, Lynnath E.; Bellchambers, Lynda M.; Depczynski, Martial; Field, Stuart N.; Friedman, Kim J.; Gilmour, James P.; Hobbs, Jean-Paul A.; Kobryn, Halina T.; Moore, James A. Y.; Nutt, Christopher D.; Shedrawi, George; Thomson, Damian P.; Wilson, Shaun K.</p> <p>2013-01-01</p> <p>Monitoring changes in coral cover and composition through space and time can provide insights to reef health and assist the focus of management and conservation efforts. We used a meta-analytical approach to assess coral cover data across latitudes 10–35°S along the west Australian coast, including 25 years of data from the Ningaloo region. Current estimates of coral cover ranged between 3 and 44% in coral habitats. Coral communities in the northern regions were dominated by corals from the families Acroporidae and Poritidae, which became less common at higher latitudes. At Ningaloo Reef coral cover has remained relatively stable through time (∼28%), although north-eastern and southern areas have experienced significant declines in overall cover. These declines are likely related to periodic disturbances such as cyclones and thermal anomalies, which were particularly noticeable around 1998/1999 and 2010/2011. Linear mixed effects models (LME) suggest latitude explains 10% of the deviance in coral cover through time at Ningaloo. Acroporidae has decreased in abundance relative to other common families at Ningaloo in the south, which might be related to persistence of more thermally and mechanically tolerant families. We identify regions where quantitative time-series data on coral cover and composition are lacking, particularly in north-western Australia. Standardising routine monitoring methods used by management and research agencies at these, and other locations, would allow a more robust assessment of coral condition and a better basis for conservation of coral reefs. PMID:23922829</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23940737','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23940737"><span>Highly heterogeneous bacterial communities associated with the South China Sea reef corals Porites lutea, Galaxea fascicularis and Acropora millepora.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Li, Jie; Chen, Qi; Zhang, Si; Huang, Hui; Yang, Jian; Tian, Xin-Peng; Long, Li-Juan</p> <p>2013-01-01</p> <p>Coral harbor diverse and specific bacteria play significant roles in coral holobiont function. Bacteria associated with three of the common and phylogenetically divergent reef-building corals in the South China Sea, Porites lutea, Galaxea fascicularis and Acropora millepora, were investigated using 454 barcoded-pyrosequencing. Three colonies of each species were sampled, and 16S rRNA gene libraries were constructed individually. Analysis of pyrosequencing libraries showed that bacterial communities associated with the three coral species were more diverse than previous estimates based on corals from the Caribbean Sea, Indo-Pacific reefs and the Red Sea. Three candidate phyla, including BRC1, OD1 and SR1, were found for the first time in corals. Bacterial communities were separated into three groups: P. lutea and G. fascicular, A. millepora and seawater. P. lutea and G. fascicular displayed more similar bacterial communities, and bacterial communities associated with A. millepora differed from the other two coral species. The three coral species shared only 22 OTUs, which were distributed in Alphaproteobacteria, Deltaproteobacteria, Gammaproteobacteria, Chloroflexi, Actinobacteria, Acidobacteria and an unclassified bacterial group. The composition of bacterial communities within each colony of each coral species also showed variation. The relatively small common and large specific bacterial communities in these corals implies that bacterial associations may be structured by multiple factors at different scales and that corals may associate with microbes in terms of similar function, rather than identical species.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4405272','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4405272"><span>Macroalgae Inhibits Larval Settlement and Increases Recruit Mortality at Ningaloo Reef, Western Australia</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Van Keulen, Mike; Loneragan, Neil R.</p> <p>2015-01-01</p> <p>Globally, many coral reefs are degraded and demonstrate reduced coral cover and increased macroalgal abundance. While negative correlations between macroalgae and coral recruitment have commonly been documented, the mechanisms by which macroalgae affects recruitment have received little attention. Here we examined the effect of macroalgae on larval settlement and the growth and survival of coral recruits, in a field experiment over nine months. Exclusion treatments were used to manipulate herbivory and macroalgal biomass, while settlement tiles measured coral settlement and survival. After nine months the volume of macroalgae was up to 40 times greater in the caged treatments than in controls and the settlement of coral larvae on the undersides of tiles within caged plots was 93% lower than in the uncaged treatments. The growth and survival of coral recruits was also severely reduced in the presence of macroalgae: survival was 79% lower in caged treatments and corals were up to 58% smaller with 75% fewer polyps. These data indicate that macroalgae has an additive effect on coral recruitment by reducing larval settlement and increasing recruit mortality. This research demonstrates that macroalgae can not only inhibit coral recruitment, but also potentially maintain dominance through a positive feedback system. PMID:25898011</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4781883','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4781883"><span>Genomic Insight into the Host–Endosymbiont Relationship of Endozoicomonas montiporae CL-33T with its Coral Host</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Ding, Jiun-Yan; Shiu, Jia-Ho; Chen, Wen-Ming; Chiang, Yin-Ru; Tang, Sen-Lin</p> <p>2016-01-01</p> <p>The bacterial genus Endozoicomonas was commonly detected in healthy corals in many coral-associated bacteria studies in the past decade. Although, it is likely to be a core member of coral microbiota, little is known about its ecological roles. To decipher potential interactions between bacteria and their coral hosts, we sequenced and investigated the first culturable endozoicomonal bacterium from coral, the E. montiporae CL-33T. Its genome had potential sign of ongoing genome erosion and gene exchange with its host. Testosterone degradation and type III secretion system are commonly present in Endozoicomonas and may have roles to recognize and deliver effectors to their hosts. Moreover, genes of eukaryotic ephrin ligand B2 are present in its genome; presumably, this bacterium could move into coral cells via endocytosis after binding to coral's Eph receptors. In addition, 7,8-dihydro-8-oxoguanine triphosphatase and isocitrate lyase are possible type III secretion effectors that might help coral to prevent mitochondrial dysfunction and promote gluconeogenesis, especially under stress conditions. Based on all these findings, we inferred that E. montiporae was a facultative endosymbiont that can recognize, translocate, communicate and modulate its coral host. PMID:27014194</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4286716','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4286716"><span>Microbes in the coral holobiont: partners through evolution, development, and ecological interactions</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Thompson, Janelle R.; Rivera, Hanny E.; Closek, Collin J.; Medina, Mónica</p> <p>2015-01-01</p> <p>In the last two decades, genetic and genomic studies have revealed the astonishing diversity and ubiquity of microorganisms. Emergence and expansion of the human microbiome project has reshaped our thinking about how microbes control host health—not only as pathogens, but also as symbionts. In coral reef environments, scientists have begun to examine the role that microorganisms play in coral life history. Herein, we review the current literature on coral-microbe interactions within the context of their role in evolution, development, and ecology. We ask the following questions, first posed by McFall-Ngai et al. (2013) in their review of animal evolution, with specific attention to how coral-microbial interactions may be affected under future environmental conditions: (1) How do corals and their microbiome affect each other's genomes? (2) How does coral development depend on microbial partners? (3) How is homeostasis maintained between corals and their microbial symbionts? (4) How can ecological approaches deepen our understanding of the multiple levels of coral-microbial interactions? Elucidating the role that microorganisms play in the structure and function of the holobiont is essential for understanding how corals maintain homeostasis and acclimate to changing environmental conditions. PMID:25621279</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSPC54B2253S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSPC54B2253S"><span>Reef scent: How brooded coral larvae from a tough coral smell their way to a new home</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Spies, N.; Richmond, R. H.; Seneca, F.; Murphy, J.; Martinez, J.; Lyman, A.</p> <p>2016-02-01</p> <p>Coral reefs are highly diverse marine ecosystems of ecological, economic, and cultural value. With the expected negative effects on reefs from global climate change including rising sea temperatures and ocean acidification, the identification of resilient coral species has become increasingly important. Leptastrea purpurea is an encrusting coral that is found throughout the Indo-Pacific and Red Sea. While most corals are broadcast spawners, releasing sperm and eggs to be fertilized in the water column, some corals brood embryos within their tissues after internal fertilization. L. purpurea appears to release planula larvae on a continuous basis from the parent colony as observed during two years of monitoring. The planula larvae show remarkable resilience under a wide range of stressful conditions including temperature, sediment, and chemical stressors, as well as the ability to successfully settle and metamorphose after 180 days in controlled laboratory conditions. Various smells were tested to identify a settlement cue for L. purpurea larvae, and our results suggest that the smell associated with other coral colonies induce larval settlement and metamorphosis. Knowledge of the settlement cues and reproductive biology of this coral is important to our understanding of coral resilience in the face of anthropogenic perturbation.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25058289','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25058289"><span>Response diversity can increase ecological resilience to disturbance in coral reefs.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Baskett, Marissa L; Fabina, Nicholas S; Gross, Kevin</p> <p>2014-08-01</p> <p>Community-level resilience depends on the interaction between multiple populations that vary in individual responses to disturbance. For example, in tropical reefs, some corals can survive higher stress (resistance) while others exhibit faster recovery (engineering resilience) following disturbances such as thermal stress. While each type will negatively affect the other through competition, each might also benefit the other by reducing the potential for an additional competitor such as macroalgae to invade after a disturbance. To determine how community composition affects ecological resilience, we modeled coral-macroalgae interactions given either a resistant coral, a resilient coral, or both together. Having both coral types (i.e., response diversity) can lead to observable enhanced ecological resilience if (1) the resilient coral is not a superior competitor and (2) disturbance levels are high enough such that the resilient coral would collapse when considered alone. This enhanced resilience occurs through competitor-enabled rescue where each coral increases the potential for the other to recover from disturbance through external recruitment, such that both corals benefit from the presence of each other in terms of total cover and resilience. Therefore, conservation management aimed at protecting resilience under global change requires consideration of both diversity and connectivity between sites experiencing differential disturbance.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3372474','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3372474"><span>Development and Validation of Computational Fluid Dynamics Models for Prediction of Heat Transfer and Thermal Microenvironments of Corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Ong, Robert H.; King, Andrew J. C.; Mullins, Benjamin J.; Cooper, Timothy F.; Caley, M. Julian</p> <p>2012-01-01</p> <p>We present Computational Fluid Dynamics (CFD) models of the coupled dynamics of water flow, heat transfer and irradiance in and around corals to predict temperatures experienced by corals. These models were validated against controlled laboratory experiments, under constant and transient irradiance, for hemispherical and branching corals. Our CFD models agree very well with experimental studies. A linear relationship between irradiance and coral surface warming was evident in both the simulation and experimental result agreeing with heat transfer theory. However, CFD models for the steady state simulation produced a better fit to the linear relationship than the experimental data, likely due to experimental error in the empirical measurements. The consistency of our modelling results with experimental observations demonstrates the applicability of CFD simulations, such as the models developed here, to coral bleaching studies. A study of the influence of coral skeletal porosity and skeletal bulk density on surface warming was also undertaken, demonstrating boundary layer behaviour, and interstitial flow magnitude and temperature profiles in coral cross sections. Our models compliment recent studies showing systematic changes in these parameters in some coral colonies and have utility in the prediction of coral bleaching. PMID:22701582</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1895955','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1895955"><span>Trophic cascade facilitates coral recruitment in a marine reserve</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Mumby, Peter J.; Harborne, Alastair R.; Williams, Jodene; Kappel, Carrie V.; Brumbaugh, Daniel R.; Micheli, Fiorenza; Holmes, Katherine E.; Dahlgren, Craig P.; Paris, Claire B.; Blackwell, Paul G.</p> <p>2007-01-01</p> <p>Reduced fishing pressure and weak predator–prey interactions within marine reserves can create trophic cascades that increase the number of grazing fishes and reduce the coverage of macroalgae on coral reefs. Here, we show that the impacts of reserves extend beyond trophic cascades and enhance the process of coral recruitment. Increased fish grazing, primarily driven by reduced fishing, was strongly negatively correlated with macroalgal cover and resulted in a 2-fold increase in the density of coral recruits within a Bahamian reef system. Our conclusions are robust because four alternative hypotheses that may generate a spurious correlation between grazing and coral recruitment were tested and rejected. Grazing appears to influence the density and community structure of coral recruits, but no detectable influence was found on the overall size-frequency distribution, community structure, or cover of corals. We interpret this absence of pattern in the adult coral community as symptomatic of the impact of a recent disturbance event that masks the recovery trajectories of individual reefs. Marine reserves are not a panacea for conservation but can facilitate the recovery of corals from disturbance and may help sustain the biodiversity of organisms that depend on a complex three-dimensional coral habitat. PMID:17488824</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2007AGUFMPP43B1287K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2007AGUFMPP43B1287K"><span>Lipid biomarkers of thermal stress in scleractinian corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Kneeland, J. M.; Hughen, K.; Cervino, J.; Eglinton, T. I.; Bartels, E.</p> <p>2007-12-01</p> <p>Lipid content and fatty acid profiles of corals and their symbiotic dinoflagellates are known to vary in response to heat stress and bleaching. To develop lipid biomarkers of heat stress and bleaching response in scleractinian corals, clones of Symbiodinium algae of clade subtypes C1 and D1 were cultured under a range of temperatures. The predominant lipids produced are palmitic (C16) and stearic (C18) saturated fatty acids and their unsaturated analogs. Other important compounds included a C22 penta-unsaturated fatty acid, which is thought to be a specific dinoflagellate marker, and a variety of sterols. Analysis of lipids extracted from coral skeleton indicated that palmitic and stearic acids were the most abundant compounds. The amount of unsaturated C16 and C18 fatty acids in coral skeleton relative to the saturated versions of those acids was much lower in coral skeleton than in the zooxanthellae tissue. This could indicate the incorporation of lipids from outside the coral host-symbiont system into the coral aragonite, or it could reflect diagenesis. A comparison between the lipids found in cloned zooxanthellae, coral tissue, and aragonitic skeleton will be presented to assess the usefulness of lipid biomarkers as indicators of temperature stress on corals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/14643784','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/14643784"><span>Trace metals in the living and nonliving components of scleractinian corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reichelt-Brushett, A J; McOrist, G</p> <p>2003-12-01</p> <p>Trace metals in coral tissue and skeleton have been investigated in various ways since the early seventies. More recently it has been suggested that the symbiotic zooxanthellae may play an important role in the accumulation and regulation of trace metals. Furthermore gamete development and mucus production may influence the metal accumulation and loss in corals. Many studies have attempted to use the annual growth bands in coral skeletons to investigate historical pollution events. However the relationship between the metal concentrations in the surrounding environment and the incorporation of this into coral skeleton is not well understood. This paper explains a method for investigating metal loads in coral tissue, zooxanthellae and skeleton. Furthermore, it presents new information suggesting that zooxanthellae accumulate most metals (Al, Fe, As, Mn, Ni, Cu, Zn, Cd, Pb) in greater concentrations than the coral tissue. Coral skeletons had consistently lower metal concentration than the zooxanthellae, tissue and gametes. The loss of zooxanthellae during stress events may have a significant contribution to the total metal loads in corals. The use of corals as biomonitors should carefully factor in zooxanthellae densities and gamete development before conclusions are drawn.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li class="active"><span>21</span></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_21 --> <div id="page_22" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li class="active"><span>22</span></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="421"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/11399272','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/11399272"><span>Mechanisms of interaction between macroalgae and scleractinians on a coral reef in Jamaica.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>River, G F.; Edmunds, P J.</p> <p>2001-07-01</p> <p>After several decades of disturbance, many coral reefs in the Caribbean are dominated by macroalgae. One process affecting this transition is coral-macroalgal competition, yet few studies have addressed the mechanisms involved. In this study, we investigated competition between the tall and bushy macroalga Sargassum hystrix (J. Agardh) and the branching coral Porites porites (Pallas) on a shallow reef in Jamaica. Experiments were designed to expose coral branches to different treatments to test the role of shading and abrasion by Sargassum on coral growth and polyp expansion. Corals exposed to Sargassum grew significantly more slowly (80% reduction) than controls, but this effect was absent when corals were caged to prevent physical contact with macroalgae. Light levels were reduced in both the algal and cage treatments, but shading apparently had little effect on the growth of corals in cages. Short-term measurements of integrated net water flow did not detect variation among treatments. In algal-mimic treatments, where clear plastic strips could touch but not shade the corals, growth rates were 25% lower than controls, but this effect was not statistically significant. Thus, the growth of corals in contact with Sargassum was reduced by abrasion and, to a lesser extent, by factors unique to living macroalgae. Analysis of polyp expansion showed that polyps were more frequently retracted when corals were in contact with macroalgae or algal-mimics compared to controls or cage treatment; the frequency of polyp contraction was correlated positively with growth. Together, these results suggest that abrasion-mediated polyp retraction is one of the primary mechanisms of competition utilized by tall (ca. 17 cm) macroalgae against scleractinian corals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2001CorRe..20..107Z','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2001CorRe..20..107Z"><span>Molluscan assemblages on coral reefs and associated hard substrata in the northern Red Sea</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Zuschin, M.; Hohenegger, J.; Steininger, F.</p> <p>2001-09-01</p> <p>Information on spatial variability and distribution patterns of organisms in coral reef environments is necessary to evaluate the increasing anthropogenic disturbance of marine environments (Richmond 1993; Wilkinson 1993; Dayton 1994). Therefore different types of subtidal, reef-associated hard substrata (reef flats, reef slopes, coral carpets, coral patches, rock grounds), each with different coral associations, were investigated to determine the distribution pattern of molluscs and their life habits (feeding strategies and substrate relations). The molluscs were strongly dominated by taxa with distinct relations to corals, and five assemblages were differentiated. The Dendropoma maxima assemblage on reef flats is a discrete entity, strongly dominated by this encrusting and suspension-feeding gastropod. All other assemblages are arranged along a substrate gradient of changing coral associations and potential molluscan habitats. The Coralliophila neritoidea- Barbatia foliata assemblage depends on the presence of Porites and shows a dominance of gastropods feeding on corals and of bivalves associated with living corals. The Chamoidea- Cerithium spp. assemblage on rock grounds is strongly dominated by encrusting bivalves. The Drupella cornus-Pteriidae assemblage occurs on Millepora- Acropora reef slopes and is strongly dominated by bivalves associated with living corals. The Barbatia setigera- Ctenoides annulata assemblage includes a broad variety of taxa, molluscan life habits and bottom types, but occurs mainly on faviid carpets and is transitional among the other three assemblages. A predicted degradation of coral coverage to rock bottoms due to increasing eutrophication and physical damage in the study area (Riegl and Piller 2000) will result in a loss of coral-associated molluscs in favor of bivalve crevice dwellers in dead coral heads and of encrusters on dead hard substrata.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFM.T41B2927G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFM.T41B2927G"><span>Tectonic Reversal of the New Hebrides Forearc Recorded by Fossil Coral Terraces on Araki, Solomon Islands</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Gallup, C. D.; Taylor, F. W.; Edwards, R. L.</p> <p>2016-12-01</p> <p>Araki is a small island in the New Hebrides forearc that exhibits a series of coral terraces. High precision 230Th ages of the corals and their elevations reveal a complicated tectonic history. Prior to the collision of the Bouganville Guyot on the subducting Australian plate with the forearc, the forearc was subsiding (Taylor et al., 2005). The highest elevation terrace on Araki has both last interglacial age (128 ka) corals and corals that grew between 103 and 107 ka present, when sea level was certainly lower than during the last interglacial period. However, the last interglacial corals occur in a cliff somewhat below the summit of Araki. We suggest this juxtaposition was produced by subsidence of the island during and after the last interglacial corals, potentially through the deposition of the 103 and 107 ka corals. At some point before or after their deposition, the island started to uplift, producing a series of terraces. Many of the corals on the lower terraces were deposited during periods of low sea level, between 33 and 62 ka. The lowest terrace is composed of Holocene corals. The mean uplift rate of Araki produced by using published sea level records for the corals deposited between 33 and 62 ka is approximately 2.4 mm/y. The uplift rate calculated based on the Holocene corals is much faster at approximately 4.7 mm/yr. A similar pattern of subsidence, to uplift, to faster uplift is found on Espiritu Santo and Malekula, encompassing 250 km of the forearc. The fossil corals thus record the changing tectonic conditions on the forearc associated with the subduction of the Bougainville Guyot. F.W. Taylor et al. (2005) TECTONICS, VOL. 24, TC6005, doi:10.1029/2004TC001650.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2011CorRe..30..473C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2011CorRe..30..473C"><span>Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Chong-Seng, K. M.; Cole, A. J.; Pratchett, M. S.; Willis, B. L.</p> <p>2011-06-01</p> <p>Recent studies have suggested that corallivorous fishes may be vectors for coral disease, but the extent to which fishes actually feed on and thereby potentially transmit coral pathogens is largely unknown. For this study, in situ video observations were used to assess the level to which fishes fed on diseased coral tissues at Lizard Island, northern Great Barrier Reef. Surveys conducted at multiple locations around Lizard Island revealed that coral disease prevalence, especially of brown band disease (BrB), was higher in lagoon and backreef locations than in exposed reef crests. Accordingly, video cameras were deployed in lagoon and backreef habitats to record feeding by fishes during 1-h periods on diseased sections of each of 44 different coral colonies. Twenty-five species from five fish families (Blennidae, Chaetodontidae, Gobiidae, Labridae and Pomacentridae) were observed to feed on infected coral tissues of staghorn species of Acropora that were naturally infected with black band disease (BBD) or brown band disease (BrB). Collectively, these fishes took an average of 18.6 (±5.6 SE) and 14.3 (±6.1 SE) bites per hour from BBD and BrB lesions, respectively. More than 40% (408/948 bites) and nearly 25% (314/1319 bites) of bites were observed on lesions associated with BBD and BrB, respectively, despite these bands each representing only about 1% of the substratum available. Moreover, many corallivorous fishes ( Labrichthys unilineatus, Chaetodon aureofasciatus, C. baronessa, C. lunulatus, C. trifascialis, Cheiloprion labiatus) selectively targeted disease lesions over adjacent healthy coral tissues. These findings highlight the important role that reef fishes may play in the dynamics of coral diseases, either as vectors for the spread of coral disease or in reducing coral disease progression through intensive and selective consumption of diseased coral tissues.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24260290','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24260290"><span>Variability in the effects of macroalgae on the survival and growth of corals: the consumer connection.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bulleri, Fabio; Couraudon-Réale, Marine; Lison de Loma, Thierry; Claudet, Joachim</p> <p>2013-01-01</p> <p>Shifts in dominance from corals to macroalgae are occurring in many coral reefs worldwide. Macroalgal canopies, while competing for space with coral colonies, may also form a barrier to herbivorous and corallivorous fish, offering protection to corals. Thus, corals could either suffer from enhanced competition with canopy-forming and understorey macroalgae or benefit from predator exclusion. Here, we tested the hypothesis that the effects of the brown, canopy-forming macroalga, Turbinaria ornata, on the survival and growth of corals can vary according to its cover, to the presence or absence of herbivorous and corallivorous fish and to the morphological types of corals. Over a period of 66 days, two coral species differing in growth form, Acropora pulchra and Porites rus, were exposed to three different covers of T. ornata (absent versus medium versus high), in the presence or absence of fish. Irrespective of the cover of T. ornata, fish exclusion reduced mortality rates of A. pulchra. Following fish exclusion, a high cover of T. ornata depressed the growth of this branched coral, whilst it had no effect when fish species were present. P. rus suffered no damage from corallivorous fish, but its growth was decreased by high covers of T. ornata, irrespective of the presence or absence of fish. These results show that negative effects of T. ornata on some coral species are subordinate to those of fish predation and are, therefore, likely to manifest only on reefs severely depleted of predators. In contrast, space dominance by T. ornata may decrease the growth of other coral species regardless of predation intensity. In general, this study shows that susceptibility to predation may determine the severity of the effects of canopy-forming macroalgae on coral growth.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23610632','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23610632"><span>Boring sponges, an increasing threat for coral reefs affected by bleaching events.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Carballo, José L; Bautista, Eric; Nava, Héctor; Cruz-Barraza, José A; Chávez, Jesus A</p> <p>2013-04-01</p> <p>Coral bleaching is a stress response of corals induced by a variety of factors, but these events have become more frequent and intense in response to recent climate-change-related temperature anomalies. We tested the hypothesis that coral reefs affected by bleaching events are currently heavily infested by boring sponges, which are playing a significant role in the destruction of their physical structure. Seventeen reefs that cover the entire distributional range of corals along the Mexican Pacific coast were studied between 2005/2006, and later between 2009/2010. Most of these coral reefs were previously impacted by bleaching events, which resulted in coral mortalities. Sponge abundance and species richness was used as an indicator of bioerosion, and coral cover was used to describe the present condition of coral reefs. Coral reefs are currently highly invaded (46% of the samples examined) by a very high diversity of boring sponges (20 species); being the coral reef framework the substrate most invaded (56%) followed by the rubbles (45%), and the living colonies (36%). The results also indicated that boring sponges are promoting the dislodgment of live colonies and large fragments from the framework. In summary, the eastern coral reefs affected by bleaching phenomena, mainly provoked by El Niño, present a high diversity and abundance of boring sponges, which are weakening the union of the colony with the reef framework and promoting their dislodgment. These phenomena will probably become even more intense and severe, as temperatures are projected to continue to rise under the scenarios for future climate change, which could place many eastern coral reefs beyond their survival threshold.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3631402','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3631402"><span>Boring sponges, an increasing threat for coral reefs affected by bleaching events</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Carballo, José L; Bautista, Eric; Nava, Héctor; Cruz-Barraza, José A; Chávez, Jesus A</p> <p>2013-01-01</p> <p>Coral bleaching is a stress response of corals induced by a variety of factors, but these events have become more frequent and intense in response to recent climate-change-related temperature anomalies. We tested the hypothesis that coral reefs affected by bleaching events are currently heavily infested by boring sponges, which are playing a significant role in the destruction of their physical structure. Seventeen reefs that cover the entire distributional range of corals along the Mexican Pacific coast were studied between 2005/2006, and later between 2009/2010. Most of these coral reefs were previously impacted by bleaching events, which resulted in coral mortalities. Sponge abundance and species richness was used as an indicator of bioerosion, and coral cover was used to describe the present condition of coral reefs. Coral reefs are currently highly invaded (46% of the samples examined) by a very high diversity of boring sponges (20 species); being the coral reef framework the substrate most invaded (56%) followed by the rubbles (45%), and the living colonies (36%). The results also indicated that boring sponges are promoting the dislodgment of live colonies and large fragments from the framework. In summary, the eastern coral reefs affected by bleaching phenomena, mainly provoked by El Niño, present a high diversity and abundance of boring sponges, which are weakening the union of the colony with the reef framework and promoting their dislodgment. These phenomena will probably become even more intense and severe, as temperatures are projected to continue to rise under the scenarios for future climate change, which could place many eastern coral reefs beyond their survival threshold. PMID:23610632</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24859909','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24859909"><span>Community structure and coral status across reef fishing intensity gradients in Palk Bay reef, southeast coast of India.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Manikandan, B; Ravindran, J; Shrinivaasu, S; Marimuthu, N; Paramasivam, K</p> <p>2014-10-01</p> <p>Coral reef fishes are exploited without the knowledge of their sustainability and their possible effect in altering the community structure of a coral reef ecosystem. Alteration of the community structure could cause a decline in the health of coral reefs and its services. We documented the coral community structure, status of live corals and reef fish assemblages in Palk Bay at the reef fishing hotspots and its nearby reef area with minimum fishing pressure and compared it with a control reef area where reef fishing was banned for more than two decades. The comparison was based on the percent cover of different forms of live corals, their diversity and the density and diversity of reef fishes. The reef fish stock in the reef fishing hotspots and its neighbouring reef was lower by 61 and 38%, respectively compared to the control reef. The herbivore fish Scarus ghobban and Siganus javus were exploited at a rate of 250 and 105 kg month(-1) fishermen(-1), respectively, relatively high comparing the small reef area. Live and dead corals colonized by turf algae were predominant in both the reef fishing hotspots and its nearby coral ecosystems. The percent cover of healthy live corals and live corals colonized by turf algae was <10 and >80%, respectively, in the intensively fished coral ecosystems. The corals were less diverse and the massive Porites and Favia colonies were abundant in the intensive reef fishing sites. Results of this study suggest that the impact of reef fish exploitation was not solely restricted to the intensively fished reefs, but also to the nearby reefs which play a critical role in the resilience of degraded reef ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/7212812-thermal-tolerance-tropical-versus-subtropical-pacific-reef-corals','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/7212812-thermal-tolerance-tropical-versus-subtropical-pacific-reef-corals"><span>Thermal tolerance in tropical versus subtropical Pacific reef corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Coles, S.L.; Jokiel, P.L.; Lewis, C.R.</p> <p>1976-04-01</p> <p>Upper lethal temperature tolerances of reef corals in Hawaii and at Enewetak, Marshall Islands, were determined in the field and under controlled laboratory conditions. Enewetak corals survived in situ temperatures of nearly 34/sup 0/C, whereas 32/sup 0/C was lethal to Hawaiian corals for similar short-term exposures. Laboratory determinations indicate that the upper thermal limits of Hawaiian corals are approximately 2/sup 0/C less than congeners from the tropical Pacific. Differences in coral thermal tolerances correspond to differences in the ambient temperature patterns between geographic areas.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35..211Y','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35..211Y"><span>"Choice" and destiny: the substrate composition and mechanical stability of settlement structures can mediate coral recruit fate in post-bleached reefs</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Yadav, Shreya; Rathod, Pooja; Alcoverro, Teresa; Arthur, Rohan</p> <p>2016-03-01</p> <p>Increasingly frequent and intense ocean warming events seriously test the buffer and recovery capacities of tropical coral reefs. Post-disturbance, available settlement structures on a reef (often dead coral skeletons) vary considerably in their mechanical stability and substrate composition, critically influencing coral recruit settlement choice and fate. In the wake of a coral mass mortality in the Lakshadweep archipelago, we examine (1) the relative availability of recruit settlement structures (from stable to unstable: reef platform, dead massive coral, consolidated rubble, dead corymbose coral, dead tabular coral, and unconsolidated rubble) in 12 recovering reefs across three atolls in the archipelago, (2) the substrate composition [crustose coralline algae (CCA), mixed turf, macroalgae] of these structural forms, and (3) whether the choice and fate of young coral are mediated by the substrate and stability of different structural forms. For this, we measured the abundance and distribution of recruit (<1 cm), juvenile (1-5 cm), and young adult (5-10) corals of 24 common coral genera. Four years after the mass mortality, reefs differed considerably in composition of settlement structures. The structures themselves varied significantly in substrate cover with dead tables largely covered in CCA [60 ± 6.05 % (SE)] and dead corymbose coral dominated by mixed turf (61.83 ± 3.8 %). The youngest visible recruits (<1 cm) clearly preferred CCA-rich structures such as dead massives and tables. However, older size classes were rarely found on unstable structures (strongly "avoiding" tables, Ivlev's electivity index, E = -0.5). Our results indicate that while substrate cover might mediate coral choice, the mechanical stability of settlement structures is critical in determining post-settlement coral survival. The composition and availability of settlement structures on a reef may serve as a characteristic signature of its recovery potential, aiding in assessments of reef resilience.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015OSJ....50..269K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015OSJ....50..269K"><span>The potential roles of bacterial communities in coral defence: A case study at Talang-talang reef</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Kuek, Felicity W. I.; Lim, Li-Fang; Ngu, Lin-Hui; Mujahid, Aazani; Lim, Po-Teen; Leaw, Chui-Pin; Müller, Moritz</p> <p>2015-06-01</p> <p>Complex microbial communities are known to exert significant influence over coral reef ecosystems. The Talang- Satang National Park is situated off the coast of Sematan and is one of the most diverse ecosystems found off-Sarawak. Interestingly, the Talang-talang reef thrives at above-average temperatures of 28- 30°C throughout the year. Through isolation and identification (16S rRNA) of native microbes from the coral, the surface mucus layer (SML), as well as the surrounding sediment and waters, we were able to determine the species composition and abundance of the culturable bacteria in the coral reef ecosystem. Isolates found attached to the coral are related mostly to Vibrio spp., presumably attached to the mucus from the water column and surrounding sediment. Pathogenic Vibrio spp. and Bacillus spp. were dominant amongst the isolates from the water column and sediment, while known coral pathogens responsible for coral bleaching, Vibrio coralliilyticus and Vibrio shiloi, were isolated from the coral SML and sediment samples respectively. Coral SML isolates were found to be closely related to known nitrogen fixers and antibiotic producers with tolerance towards elevated temperatures and heavy metal contamination, offering a possible explanation why the local corals are able to thrive in higher than usual temperatures. This specialized microbiota may be important for protecting the corals from pathogens by occupying entry niches and/or through the production of secondary metabolites such as antibiotics. The communities from the coral SML were tested against each other at 28, 30 and 32°C, and were also assessed for the presence of type I modular polyketides synthase (PKS) and non-ribosomal peptide synthetase (NRPS) genes which are both involved in the production of antibiotic compounds. The bacterial community from the SML exhibited antimicrobial properties under normal temperatures while pathogenic strains appeared toxic at elevated temperatures and our results highlight the role of the coral SML bacterial community in the coral's defence.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSPC54B2246S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSPC54B2246S"><span>Mapping Prevalence and Incidence of Coral Disease in reef-building corals at two Natural Reserves of the Southwest Puerto Rico</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sanchez Viruet, I.; Irizarry-Soto, E.; Ruiz-Valentín, I.</p> <p>2016-02-01</p> <p>Coral diseases seems to be the main cause of coral reef decline in the Caribbean. Before the bleaching event of 2005, coral reefs in Puerto Rico were dominated by the reef-building taxa: Orbicella annularis, Porites astreoides, Montastrea cavernosa, Agaricia agaracites and Colpophyllia natans. After the event, live-coral cover significantly declined and more than 90% of the scleractinian corals in the U.S. Virgin Islands and Puerto Rico showed signals of thermal stressors. The prevalence of coral diseases in five reef-building coral (Orbicella annularis, Orbicella franksi, Orbicella faveolata, Porites porites and Pseudiploria strigosa) species was assessed by tagging, photographing, and mapping all diseased and healthy colonies within 10 permanent 40m2 band transects at each inshore and mid-shelf reefs of Belvedere and Punta Guaniquilla Natural Reserves using a random stratified sampling method. Maximum and perpendicular diameter was used to assess coral size using Coral Point Count with Excel Extension. Corals were classified into three size class populations (class I: 0-50cm, class II: 50-100cm and class III: >100 cm). Data was used to develop a GIS-based map containing coral species, size and disease presence. Preliminary results of the inshore area showed a higher disease prevalence in Belvedere natural reserve and for P. strigosa (17.1%) and O. annularis (9.3%). Frequency distribution analysis showed a dominance of O. faveolata at Punta Guaniquilla and Belvedere (127 and 88 individuals respectively). Size class I dominates the distribution of each species within the natural reserves with a higher disease prevalence. Future work include continue prevalence surveys of the outer reef shelf on both natural reserves, monitoring and GIS-based mapping of incidence and resilience through time. This study will help in the assessment of the status of the coral reef of the southwest insular platform.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMEP23B0965H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMEP23B0965H"><span>Linking Wave Forcing to Coral Cover and Structural Complexity Across Coral Reef Flats</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Harris, D. L.; Rovere, A.; Parravicini, V.; Casella, E.</p> <p>2015-12-01</p> <p>The hydrodynamic regime is a significant component in the geomorphic and ecological development of coral reefs. The energy gradients and flow conditions generated by the breaking and transformation of waves across coral reef crests and flats drive changes in geomorphic structure, and coral growth form and distribution. One of the key aspects in regulating the wave energy propagating across reef flats is the rugosity or roughness of the benthic substrate. Rugosity and structural complexity of coral reefs is also a key indicator of species diversity, ecological functioning, and reef health. However, the links between reef rugosity, coral species distribution and abundance, and hydrodynamic forcing are poorly understood. In this study we examine this relationship by using high resolution measurement of waves in the surf zone and coral reef benthic structure.Pressure transducers (logging at 4 Hz) were deployed in cross reef transects at two sites (Tiahura and Ha'apiti reef systems) in Moorea, French Polynesia with wave characteristics determined on a wave by wave basis. A one dimensional hydrodynamic model (XBeach) was calibrated from this data to determine wave processes on the reef flats under average conditions. Transects of the reef benthic structure were conducted using photographic analysis and the three dimensional reef surface was constructed using structure from motion procedures. From this analysis reef rugosity, changes in coral genus and growth form, and across reef shifts in benthic community were determined. The results show clear changes in benthic assemblages along wave energy gradients with some indication of threshold values of wave induced bed shear stress above which live coral cover was reduced. Reef rugosity was shown to be significantly along the cross-reef transect which has important implications for accurate assessment of wave dissipation across coral reef flats. Links between reef rugosity and coral genus were also observed and may indicate that some coral species are crucial in maintaining the structural diversity of coral reefs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23816307','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23816307"><span>Climate change impacts on coral reefs: synergies with local effects, possibilities for acclimation, and management implications.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ateweberhan, Mebrahtu; Feary, David A; Keshavmurthy, Shashank; Chen, Allen; Schleyer, Michael H; Sheppard, Charles R C</p> <p>2013-09-30</p> <p>Most reviews concerning the impact of climate change on coral reefs discuss independent effects of warming or ocean acidification. However, the interactions between these, and between these and direct local stressors are less well addressed. This review underlines that coral bleaching, acidification, and diseases are expected to interact synergistically, and will negatively influence survival, growth, reproduction, larval development, settlement, and post-settlement development of corals. Interactions with local stress factors such as pollution, sedimentation, and overfishing are further expected to compound effects of climate change. Reduced coral cover and species composition following coral bleaching events affect coral reef fish community structure, with variable outcomes depending on their habitat dependence and trophic specialisation. Ocean acidification itself impacts fish mainly indirectly through disruption of predation- and habitat-associated behavior changes. Zooxanthellate octocorals on reefs are often overlooked but are substantial occupiers of space; these also are highly susceptible to bleaching but because they tend to be more heterotrophic, climate change impacts mainly manifest in terms of changes in species composition and population structure. Non-calcifying macroalgae are expected to respond positively to ocean acidification and promote microbe-induced coral mortality via the release of dissolved compounds, thus intensifying phase-shifts from coral to macroalgal domination. Adaptation of corals to these consequences of CO2 rise through increased tolerance of corals and successful mutualistic associations between corals and zooxanthellae is likely to be insufficient to match the rate and frequency of the projected changes. Impacts are interactive and magnified, and because there is a limited capacity for corals to adapt to climate change, global targets of carbon emission reductions are insufficient for coral reefs, so lower targets should be pursued. Alleviation of most local stress factors such as nutrient discharges, sedimentation, and overfishing is also imperative if sufficient overall resilience of reefs to climate change is to be achieved. Copyright © 2013 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2009CorRe..28..683M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2009CorRe..28..683M"><span>Herbivory versus corallivory: are parrotfish good or bad for Caribbean coral reefs?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mumby, Peter J.</p> <p>2009-09-01</p> <p>With coral cover in decline on many Caribbean reefs, any process of coral mortality is of potential concern. While sparisomid parrotfishes are major grazers of Caribbean reefs and help control algal blooms, the fact that they also undertake corallivory has prompted some to question the rationale for their conservation. Here the weight of evidence for beneficial effects of parrotfishes, in terms of reducing algal cover and facilitating demographic processes in corals, and the deleterious effects of parrotfishes in terms of causing coral mortality and chronic stress, are reviewed. While elevated parrotfish density will likely increase the predation rate upon juvenile corals, the net effect appears to be positive in enhancing coral recruitment through removal of macroalgal competitors. Parrotfish corallivory can cause modest partial colony mortality in the most intensively grazed species of Montastraea but the generation and healing of bite scars appear to be in near equilibrium, even when coral cover is low. Whole colony mortality in adult corals can lead to complete exclusion of some delicate, lagoonal species of Porites from forereef environments but is only reported for one reef species ( Porites astreoides), for one habitat (backreef), and with uncertain incidence (though likely <<10%). No deleterious effects of predation on coral growth or fecundity have been reported, though recovery of zooxanthellae after bleaching events may be retarded. The balance of evidence to date finds strong support for the herbivory role of parrotfishes in facilitating coral recruitment, growth, and fecundity. In contrast, no net deleterious effects of corallivory have been reported for reef corals. Corallivory is unlikely to constrain overall coral cover but contraints upon dwindling populations of the Montastraea annularis species complex are feasible and the role of parrotfishes as a vector of coral disease requires evaluation. However, any assertion that conservation practices should guard against protecting corallivorous parrotfishes appears to be unwarranted at this stage.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25611594','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25611594"><span>Forecasted coral reef decline in marine biodiversity hotspots under climate change.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Descombes, Patrice; Wisz, Mary S; Leprieur, Fabien; Parravicini, Valerianio; Heine, Christian; Olsen, Steffen M; Swingedouw, Didier; Kulbicki, Michel; Mouillot, David; Pellissier, Loïc</p> <p>2015-01-21</p> <p>Coral bleaching events threaten coral reef habitats globally and cause severe declines of local biodiversity and productivity. Related to high sea surface temperatures (SST), bleaching events are expected to increase as a consequence of future global warming. However, response to climate change is still uncertain as future low-latitude climatic conditions have no present-day analogue. Sea surface temperatures during the Eocene epoch were warmer than forecasted changes for the coming century, and distributions of corals during the Eocene may help to inform models forecasting the future of coral reefs. We coupled contemporary and Eocene coral occurrences with information on their respective climatic conditions to model the thermal niche of coral reefs and its potential response to projected climate change. We found that under the RCP8.5 climate change scenario, the global suitability for coral reefs may increase up to 16% by 2100, mostly due to improved suitability of higher latitudes. In contrast, in its current range, coral reef suitability may decrease up to 46% by 2100. Reduction in thermal suitability will be most severe in biodiversity hotspots, especially in the Indo-Australian Archipelago. Our results suggest that many contemporary hotspots for coral reefs, including those that have been refugia in the past, spatially mismatch with future suitable areas for coral reefs posing challenges to conservation actions under climate change. © 2015 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29902263','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29902263"><span>Contrasting seasonal responses in dinitrogen fixation between shallow and deep-water colonies of the model coral Stylophora pistillata in the northern Red Sea.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bednarz, Vanessa N; Naumann, Malik S; Cardini, Ulisse; van Hoytema, Nanne; Rix, Laura; Al-Rshaidat, Mamoon M D; Wild, Christian</p> <p>2018-01-01</p> <p>Tropical corals are often associated with dinitrogen (N2)-fixing bacteria (diazotrophs), and seasonal changes in key environmental parameters, such as dissolved inorganic nitrogen (DIN) availability and seawater temperature, are known to affect N2 fixation in coral-microbial holobionts. Despite, then, such potential for seasonal and depth-related changes in N2 fixation in reef corals, such variation has not yet been investigated. Therefore, this study quantified seasonal (winter vs. summer) N2 fixation rates associated with the reef-building coral Stylophora pistillata collected from depths of 5, 10 and 20 m in the northern Gulf of Aqaba (Red Sea). Findings revealed that corals from all depths exhibited the highest N2 fixation rates during the oligotrophic summer season, when up to 11% of their photo-metabolic nitrogen demand (CPND) could be met by N2 fixation. While N2 fixation remained seasonally stable for deep corals (20 m), it significantly decreased for the shallow corals (5 and 10 m) during the DIN-enriched winter season, accounting for less than 2% of the corals' CPND. This contrasting seasonal response in N2 fixation across corals of different depths could be driven by 1) release rates of coral-derived organic matter, 2) the community composition of the associated diazotrophs, and/or 3) nutrient acquisition by the Symbiodinium community.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2010AGUFMOS13A1218R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2010AGUFMOS13A1218R"><span>NOAA Coral Reef Watch: Decision Support Tools for Coral Reef Managers</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Rauenzahn, J.; Eakin, C.; Skirving, W. J.; Burgess, T.; Christensen, T.; Heron, S. F.; Li, J.; Liu, G.; Morgan, J.; Nim, C.; Parker, B. A.; Strong, A. E.</p> <p>2010-12-01</p> <p>A multitude of natural and anthropogenic stressors exert substantial influence on coral reef ecosystems and contribute to bleaching events, slower coral growth, infectious disease outbreaks, and mortality. Satellite-based observations can monitor, at a global scale, environmental conditions that influence both short-term and long-term coral reef ecosystem health. From research to operations, NOAA Coral Reef Watch (CRW) incorporates paleoclimatic, in situ, and satellite-based biogeophysical data to provide near-real-time and forecast information and tools to help managers, researchers, and other stakeholders interpret coral health and stress. CRW has developed an operational, near-real-time product suite that includes sea surface temperature (SST), SST time series data, SST anomaly charts, coral bleaching HotSpots, and Degree Heating Weeks (DHW). Bi-weekly global SST analyses are based on operational nighttime-only SST at 50-km resolution. CRW is working to develop high-resolution products to better address thermal stress on finer scales and is applying climate models to develop seasonal outlooks of coral bleaching. Automated Satellite Bleaching Alerts (SBAs), available at Virtual Stations worldwide, provide the only global early-warning system to notify managers of changing reef environmental conditions. Currently, CRW is collaborating with numerous domestic and international partners to develop new tools to address ocean acidification, infectious diseases of corals, combining light and temperature to detect coral photosystem stress, and other parameters.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70098089','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70098089"><span>Microbial aggregates within tissues infect a diversity of corals throughout the Indo-Pacific</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Work, Thierry M.; Aeby, Greta S.</p> <p>2014-01-01</p> <p>Coral reefs are highly diverse ecosystems where symbioses play a pivotal role. Corals contain cell-associated microbial aggregates (CAMA), yet little is known about how widespread they are among coral species or the nature of the symbiotic relationship. Using histology, we found CAMA within 24 species of corals from 6 genera from Hawaii, American Samoa, Palmyra, Johnston Atoll, Guam, and Australia. Prevalence (%) of infection varied among coral genera: Acropora, Porites, and Pocillopora were commonly infected whereas Montipora were not. Acropora from the Western Pacific were significantly more likely to be infected with CAMA than those from the Central Pacific, whereas the reverse was true for Porites. Compared with apparently healthy colonies, tissues from diseased colonies were significantly more likely to have both surface and basal body walls infected. The close association of CAMA with host cells in numerous species of apparently healthy corals and lack of associated cell pathology reveals an intimate agent-host association. Furthermore, CAMA are Gram negative and in some corals may be related to chlamydia or rickettsia. We propose that CAMA in adult corals are facultative secondary symbionts that could play an important ecological role in some dominant coral genera in the Indo-Pacific. CAMA are important in the life histories of other animals, and more work is needed to understand their role in the distribution, evolution, physiology, and immunology of reef corals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35..583L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35..583L"><span>Discordant coral-symbiont structuring: factors shaping geographical variation of Symbiodinium communities in a facultative zooxanthellate coral genus, Oculina</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Leydet, Karine Posbic; Hellberg, Michael E.</p> <p>2016-06-01</p> <p>Understanding the factors that help shape the association between corals and their algal symbionts, zooxanthellae ( Symbiodinium), is necessary to better understand the functional diversity and acclimatization potential of the coral host. However, most studies focus on tropical zooxanthellate corals and their obligate algal symbionts, thus limiting our full comprehension of coral-algal symbiont associations. Here, we examine algal associations in a facultative zooxanthellate coral. We survey the Symbiodinium communities associated with Oculina corals in the western North Atlantic and the Mediterranean using one clade-level marker ( psbA coding region) and three fine-scale markers ( cp23S- rDNA, b7sym15 flanking region, and b2sym17). We ask whether Oculina spp. harbor geographically different Symbiodinium communities across their geographic range and, if so, whether the host's genetics or habitat differences are correlated with this geographical variation. We found that Oculina corals harbor different Symbiodinium communities across their geographical range. Of the habitat differences (including chlorophyll a concentration and depth), sea surface temperature is better correlated with this geographical variation than the host's genetics, a pattern most evident in the Mediterranean. Our results suggest that although facultative zooxanthellate corals may be less dependent on their algal partners compared to obligate zooxanthellate corals, the Symbiodinium communities that they harbor may nevertheless reflect acclimatization to environmental variation among habitats.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li class="active"><span>22</span></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_22 --> <div id="page_23" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li class="active"><span>23</span></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="441"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17054489','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17054489"><span>Conservation genetics and the resilience of reef-building corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>van Oppen, Madeleine J H; Gates, Ruth D</p> <p>2006-11-01</p> <p>Coral reefs have suffered long-term decline due to a range of anthropogenic disturbances and are now also under threat from climate change. For appropriate management of these vulnerable and valuable ecosystems it is important to understand the factors and processes that determine their resilience and that of the organisms inhabiting them, as well as those that have led to existing patterns of coral reef biodiversity. The scleractinian (stony) corals deposit the structural framework that supports and promotes the maintenance of biological diversity and complexity of coral reefs, and as such, are major components of these ecosystems. The success of reef-building corals is related to their obligate symbiotic association with dinoflagellates of the genus Symbiodinium. These one-celled algal symbionts (zooxanthellae) live in the endodermal tissues of their coral host, provide most of the host's energy budget and promote rapid calcification. Furthermore, zooxanthellae are the main primary producers on coral reefs due to the oligotrophic nature of the surrounding waters. In this review paper, we summarize and critically evaluate studies that have employed genetics and/or molecular biology in examining questions relating to the evolution and ecology of reef-building corals and their algal endosymbionts, and that bear relevance to coral reef conservation. We discuss how these studies can focus future efforts, and examine how these approaches enhance our understanding of the resilience of reef-building corals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28319134','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28319134"><span>Genotype and local environment dynamically influence growth, disturbance response and survivorship in the threatened coral, Acropora cervicornis.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Drury, Crawford; Manzello, Derek; Lirman, Diego</p> <p>2017-01-01</p> <p>The relationship between the coral genotype and the environment is an important area of research in degraded coral reef ecosystems. We used a reciprocal outplanting experiment with 930 corals representing ten genotypes on each of eight reefs to investigate the influence of genotype and the environment on growth and survivorship in the threatened Caribbean staghorn coral, Acropora cervicornis. Coral genotype and site were strong drivers of coral growth and individual genotypes exhibited flexible, non-conserved reaction norms, complemented by ten-fold differences in growth between specific G-E combinations. Growth plasticity may diminish the influence of local adaptation, where foreign corals grew faster than native corals at their home sites. Novel combinations of environment and genotype also significantly affected disturbance response during and after the 2015 bleaching event, where these factors acted synergistically to drive variation in bleaching and recovery. Importantly, small differences in temperature stress elicit variable patterns of survivorship based on genotype and illustrate the importance of novel combinations of coral genetics and small differences between sites representing habitat refugia. In this context, acclimatization and flexibility is especially important given the long lifespan of corals coping with complex environmental change. The combined influence of site and genotype creates short-term differences in growth and survivorship, contributing to the standing genetic variation needed for adaptation to occur over longer timescales and the recovery of degraded reefs through natural mechanisms.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=232915&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=232915&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Ecological intereactions of reef building corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Coral reefs are very important marine ecosystems because they support tremendous biodiversity and reefs are critical economic resources many coastal nations. Tropical reef structures are largely built by stony corals. This presentation provides background on basic coral biology t...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052073p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052073p/"><span>7. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>7. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3828) Photographer unknown, 1923-25 SEGOVIA PLAZA - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052075p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052075p/"><span>9. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>9. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3812) Photographer unknown, 1923-25 DESOTO PLAZA FOUNTAIN - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSPC54B2261J','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSPC54B2261J"><span>Influence of Coral Community Structure and Thermal Stress Exposure on Observed Patterns of Bleaching across the Northern Mariana Islands</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Johnston, L.; Heron, S. F.; Johnson, S.; Okano, R.; Benavente, D.; Iguel, J.; Perez, D. I.; Liu, G.; Geiger, E.; Eakin, C. M.</p> <p>2016-02-01</p> <p>In 2013 and 2014, the Mariana Archipelago experienced consecutive thermal stress events that resulted in widespread coral bleaching and mortality. Using in situ survey data collected across seven of the Northern Mariana Islands during the 2014 event, we undertook the first quantitative comparison between the National Oceanic and Atmospheric Administration's Coral Reef Watch 5 km satellite monitoring products and coral bleaching observations. Analysis of coral community characteristics, historical temperature conditions and thermal stress revealed a strong influence of coral biodiversity in the patterns of observed bleaching. This illustrates the importance of using local benthic characteristics to interpret the level of impact from thermal stress exposure. In an era of continuing climate change, accurate monitoring of thermal stress and prediction of coral bleaching are essential for resource managers and stakeholders to direct resources to the most effective management actions to conserve coral reefs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3945051','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3945051"><span>Discovery of a living coral reef in the coastal waters of Iraq</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pohl, Thomas; Al-Muqdadi, Sameh W.; Ali, Malik H.; Fawzi, Nadia Al-Mudaffar; Ehrlich, Hermann; Merkel, Broder</p> <p>2014-01-01</p> <p>Until now, it has been well-established that coral complex in the Arabian/Persian Gulf only exist in the coastal regions of Bahrain, Iran, Kuwait, Oman, Qatar, Saudi Arabia, and United Arab Emirates and it was thought that there are no coral reefs in Iraq. However, here for the first time we show the existence of a living 28 km2 large coral reef in this country. These corals are adapted to one of the most extreme coral-bearing environments on earth: the seawater temperature in this area ranges between 14 and 34°C. The discovery of the unique coral reef oasis in the turbid coastal waters of Iraq will stimulate the interest of governmental agencies, environmental organizations, as well as of the international scientific community working on the fundamental understanding of coral marine ecosystems and global climate today. PMID:24603901</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24603901','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24603901"><span>Discovery of a living coral reef in the coastal waters of Iraq.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pohl, Thomas; Al-Muqdadi, Sameh W; Ali, Malik H; Fawzi, Nadia Al-Mudaffar; Ehrlich, Hermann; Merkel, Broder</p> <p>2014-03-06</p> <p>Until now, it has been well-established that coral complex in the Arabian/Persian Gulf only exist in the coastal regions of Bahrain, Iran, Kuwait, Oman, Qatar, Saudi Arabia, and United Arab Emirates and it was thought that there are no coral reefs in Iraq. However, here for the first time we show the existence of a living 28 km(2) large coral reef in this country. These corals are adapted to one of the most extreme coral-bearing environments on earth: the seawater temperature in this area ranges between 14 and 34°C. The discovery of the unique coral reef oasis in the turbid coastal waters of Iraq will stimulate the interest of governmental agencies, environmental organizations, as well as of the international scientific community working on the fundamental understanding of coral marine ecosystems and global climate today.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017CorRe..36.1171N','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017CorRe..36.1171N"><span>Effects of coral-derived organic matter on the growth of bacterioplankton and heterotrophic nanoflagellates</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Nakajima, Ryota; Tanaka, Yasuaki; Guillemette, Ryan; Kurihara, Haruko</p> <p>2017-12-01</p> <p>Exudates derived from hermatypic corals were incubated with <2 µm filtered seawater containing heterotrophic bacteria and <10 µm filtered seawater containing bacteria and nanoflagellates (HNF) under dark conditions for 96 h to quantify the growth of both bacteria and HNF in response to coral-derived dissolved organic matter (DOM). The addition of coral-derived DOM caused significantly higher growth rates and production of bacteria and HNF compared to those in control seawater without coral exudates. During the incubation, HNF exhibited their peak in abundance 24-48 h after the peak abundance of bacteria. The growth efficiencies of both bacteria and HNF were significantly higher with coral-derived DOM, suggesting higher transfer efficiency from bacteria that is fueled by coral organic matter to HNF. Therefore, trophic transfer of coral-derived DOM from bacteria to HNF can contribute to efficient carbon flow through the microbial food web.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2012-04-20/pdf/2012-9604.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2012-04-20/pdf/2012-9604.pdf"><span>77 FR 23632 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Generic Annual Catch Limits...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2012-04-20</p> <p>..., Shrimp, and Coral and Coral Reefs Fishery Management Plans for the Gulf of Mexico (FMPs), which was... Coral Reefs FMP was inadvertently removed from Table 1 in Sec. 622.1. The intent was to remove octocoral... regulatory text. In Sec. 622.1, paragraph (b), Table 1, the row titled, ``FMP for Coral and Coral Reefs of...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25467196','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25467196"><span>Early transcriptional changes in the reef-building coral Acropora aspera in response to thermal and nutrient stress.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rosic, Nedeljka; Kaniewska, Paulina; Chan, Chon-Kit Kenneth; Ling, Edmund Yew Siang; Edwards, David; Dove, Sophie; Hoegh-Guldberg, Ove</p> <p>2014-12-02</p> <p>Changes to the environment as a result of human activities can result in a range of impacts on reef building corals that include coral bleaching (reduced concentrations of algal symbionts), decreased coral growth and calcification, and increased incidence of diseases and mortality. Understanding how elevated temperatures and nutrient concentration affect early transcriptional changes in corals and their algal endosymbionts is critically important for evaluating the responses of coral reefs to global changes happening in the environment. Here, we investigated the expression of genes in colonies of the reef-building coral Acropora aspera exposed to short-term sub-lethal levels of thermal (+6°C) and nutrient stress (ammonium-enrichment: 20 μM). The RNA-Seq data provided hundreds of differentially expressed genes (DEGs) corresponding to various stress regimes, with 115 up- and 78 down-regulated genes common to all stress regimes. A list of DEGs included up-regulated coral genes like cytochrome c oxidase and NADH-ubiquinone oxidoreductase and up-regulated photosynthetic genes of algal origin, whereas coral GFP-like fluorescent chromoprotein and sodium/potassium-transporting ATPase showed reduced transcript levels. Taxonomic analyses of the coral holobiont disclosed the dominant presence of transcripts from coral (~70%) and Symbiodinium (~10-12%), as well as ~15-20% of unknown sequences which lacked sequence identity to known genes. Gene ontology analyses revealed enriched pathways, which led to changes in the dynamics of protein networks affecting growth, cellular processes, and energy requirement. In corals with preserved symbiont physiological performance (based on Fv/Fm, photo-pigment and symbiont density), transcriptomic changes and DEGs provided important insight into early stages of the stress response in the coral holobiont. Although there were no signs of coral bleaching after exposure to short-term thermal and nutrient stress conditions, we managed to detect oxidative stress and apoptotic changes on a molecular level and provide a list of prospective stress biomarkers for both partners in symbiosis. Consequently, our findings are important for understanding and anticipating impacts of anthropogenic global climate change on coral reefs.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3105665','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3105665"><span>The impact of reduced pH on the microbial community of the coral Acropora eurystoma</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Meron, Dalit; Atias, Elinor; Iasur Kruh, Lilach; Elifantz, Hila; Minz, Dror; Fine, Maoz; Banin, Ehud</p> <p>2011-01-01</p> <p>Rising concentrations of atmospheric carbon dioxide are acidifying the world's oceans. Surface seawater pH is 0.1 units lower than pre-industrial values and is predicted to decrease by up to 0.4 units by the end of the century. This change in pH may result in changes in the physiology of ocean organisms, in particular, organisms that build their skeletons/shells from calcium carbonate, such as corals. This physiological change may also affect other members of the coral holobiont, for example, the microbial communities associated with the coral, which in turn may affect the coral physiology and health. In the present study, we examined changes in bacterial communities in the coral mucus, tissue and skeleton following exposure of the coral Acropora eurystoma to two different pH conditions: 7.3 and 8.2 (ambient seawater). The microbial community was different at the two pH values, as determined by denaturing gradient gel electrophoresis and 16S rRNA gene sequence analysis. Further analysis of the community in the corals maintained at the lower pH revealed an increase in bacteria associated with diseased and stressed corals, such as Vibrionaceae and Alteromonadaceae. In addition, an increase in the number of potential antibacterial activity was recorded among the bacteria isolated from the coral maintained at pH 7.3. Taken together, our findings highlight the impact that changes in the pH may have on the coral-associated bacterial community and their potential contribution to the coral host. PMID:20668489</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26874890','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26874890"><span>Mine waste disposal leads to lower coral cover, reduced species richness and a predominance of simple coral growth forms on a fringing coral reef in Papua New Guinea.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Haywood, M D E; Dennis, D; Thomson, D P; Pillans, R D</p> <p>2016-04-01</p> <p>A large gold mine has been operating at the Lihir Island Group, Papua New Guinea since 1997. The mine disposes of waste rock in nearshore waters, impacting nearby coral communities. During 2010, 2012 we conducted photographic surveys at 73 sites within 40 km of the mine to document impacts of mining operations on the hard coral communities. Coral communities close to the mine (∼2 km to the north and south of the mine) were depaurperate, but surprisingly, coral cover and community composition beyond this range appeared to be relatively similar, suggesting that the mine impacts were limited spatially. In particular, we found mining operations have resulted in a significant decrease in coral cover (4.4% 1.48 km from the disposal site c.f. 66.9% 10.36 km from the disposal site), decreased species richness and a predominance of less complex growth forms within ∼2 km to the north and south of the mine waste disposal site. In contrast to the two 'snapshot' surveys of corals performed in 2010 and 2012, long term data (1999-2012) based on visual estimates of coral cover suggested that impacts on coral communities may have been more extensive than this. With global pressures on the world's coral reefs increasing, it is vital that local, direct anthropogenic pressures are reduced, in order to help offset the impacts of climate change, disease and predation. Crown Copyright © 2016. Published by Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4100925','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4100925"><span>Sediment and Turbidity Associated with Offshore Dredging Increase Coral Disease Prevalence on Nearby Reefs</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pollock, F. Joseph; Lamb, Joleah B.; Field, Stuart N.; Heron, Scott F.; Schaffelke, Britta; Shedrawi, George; Bourne, David G.; Willis, Bette L.</p> <p>2014-01-01</p> <p>In recent decades, coral reef ecosystems have declined to the extent that reefs are now threatened globally. While many water quality parameters have been proposed to contribute to reef declines, little evidence exists conclusively linking specific water quality parameters with increased disease prevalence in situ. Here we report evidence from in situ coral health surveys confirming that chronic exposure to dredging-associated sediment plumes significantly increase the prevalence of white syndromes, a devastating group of globally important coral diseases. Coral health surveys were conducted along a dredging-associated sediment plume gradient to assess the relationship between sedimentation, turbidity and coral health. Reefs exposed to the highest number of days under the sediment plume (296 to 347 days) had two-fold higher levels of disease, largely driven by a 2.5-fold increase in white syndromes, and a six-fold increase in other signs of compromised coral health relative to reefs with little or no plume exposure (0 to 9 days). Multivariate modeling and ordination incorporating sediment exposure level, coral community composition and cover, predation and multiple thermal stress indices provided further confirmation that sediment plume exposure level was the main driver of elevated disease and other compromised coral health indicators. This study provides the first evidence linking dredging-associated sedimentation and turbidity with elevated coral disease prevalence in situ. Our results may help to explain observed increases in global coral disease prevalence in recent decades and suggest that minimizing sedimentation and turbidity associated with coastal development will provide an important management tool for controlling coral disease epizootics. PMID:25029525</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25029525','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25029525"><span>Sediment and turbidity associated with offshore dredging increase coral disease prevalence on nearby reefs.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pollock, F Joseph; Lamb, Joleah B; Field, Stuart N; Heron, Scott F; Schaffelke, Britta; Shedrawi, George; Bourne, David G; Willis, Bette L</p> <p>2014-01-01</p> <p>In recent decades, coral reef ecosystems have declined to the extent that reefs are now threatened globally. While many water quality parameters have been proposed to contribute to reef declines, little evidence exists conclusively linking specific water quality parameters with increased disease prevalence in situ. Here we report evidence from in situ coral health surveys confirming that chronic exposure to dredging-associated sediment plumes significantly increase the prevalence of white syndromes, a devastating group of globally important coral diseases. Coral health surveys were conducted along a dredging-associated sediment plume gradient to assess the relationship between sedimentation, turbidity and coral health. Reefs exposed to the highest number of days under the sediment plume (296 to 347 days) had two-fold higher levels of disease, largely driven by a 2.5-fold increase in white syndromes, and a six-fold increase in other signs of compromised coral health relative to reefs with little or no plume exposure (0 to 9 days). Multivariate modeling and ordination incorporating sediment exposure level, coral community composition and cover, predation and multiple thermal stress indices provided further confirmation that sediment plume exposure level was the main driver of elevated disease and other compromised coral health indicators. This study provides the first evidence linking dredging-associated sedimentation and turbidity with elevated coral disease prevalence in situ. Our results may help to explain observed increases in global coral disease prevalence in recent decades and suggest that minimizing sedimentation and turbidity associated with coastal development will provide an important management tool for controlling coral disease epizootics.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013CorRe..32...91D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013CorRe..32...91D"><span>Toxic coral gobies reduce the feeding rate of a corallivorous butterflyfish on Acropora corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Dirnwoeber, M.; Herler, J.</p> <p>2013-03-01</p> <p>The obligate coral-dwelling gobiid genus Gobiodon inhabits Acropora corals and has developed various physiological, morphological and ethological adaptations towards this life habit. While the advantages of this coral-fish association are well documented for Gobiodon, possible fitness-increasing factors for the host coral are unknown. This study examines the influence of coral-dwelling gobies on the feeding behaviour of obligate corallivorous butterflyfishes. In an aquarium experiment using video observation, the corallivorous butterflyfish Chaetodon austriacus fed significantly less on corals inhabited by two Gobiodon species compared to unoccupied coral colonies of similar size. The more agonistic species G. histrio, which mostly displayed directed movements towards butterflyfishes, decreased butterflyfish bite rate by 62-98 % compared to uninhabited colonies. For Gobiodon sp. 3, which mostly displayed undirected movements in response to visits by C. austriacus, bite rate reduction was 64-68 %. The scale-less skin of Gobiodon spp. is covered by mucus that is toxic and multi-functional by reducing predation as well as affecting parasite attachment. A choice flume experiment suggests that the highly diluted skin mucus of Gobiodon spp. also functions as a corallivore repellent. This study demonstrates that Gobiodon spp. exhibit resource defence against coral-feeding butterflyfishes and also that coral colonies without resident Gobiodon suffer higher predation rates. Although the genus Gobiodon is probably a facultative corallivore, this study shows that by reducing predation on inhabited colonies by other fishes, these obligate coral-dwellers either compensate for their own fitness-decreasing impact on host colonies or live in a mutualistic association with them.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70094160','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70094160"><span>Lectins stain cells differentially in the coral, Montipora capitata</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Work, Thierry M.; Farah, Yael</p> <p>2014-01-01</p> <p>A limitation in our understanding of coral disease pathology and cellular pathogenesis is a lack of reagents to characterize coral cells. We evaluated the utility of plant lectins to stain tissues of a dominant coral, Montipora capitata, from Hawaii. Of 22 lectins evaluated, nine of these stained structures in the upper or basal body wall of corals. Specific structures revealed by lectins that were not considered distinct or evident on routine hematoxylin and eosin sections of coral tissues included apical and basal granules in gastrodermis and epidermis, cnidoglandular tract and actinopharynx cell surface membranes, capsules of mature holotrichous isorhizas, and perivitelline and periseminal cells. Plant lectins could prove useful to further our understanding of coral physiology, anatomy, cell biology, and disease pathogenesis.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052070p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052070p/"><span>4. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>4. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3686) Photographer unknown, 1923-25 GRANADA ENTRANCE, TAMIAMI TRAIL - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=146450&Lab=NHEERL&keyword=tourism&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=146450&Lab=NHEERL&keyword=tourism&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>CHARACTERIZING CORAL CONDITION USING ESTIMATES OF THREE-DIMENSIONAL COLONY SURFACE AREA</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Coral reefs provide shoreline protection, biological diversity, fishery harvets, and tourism, all values that stem from the physically-complex coral infrastructure. Stony corals (scleractinianss) construct and maintain the reef through deposition of calcium carbonate. Therefore...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052078p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052078p/"><span>12. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>12. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3110) Photographer unknown, 1923-25 BALBOA PLAZA, DESOTO BOULVARD - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li class="active"><span>23</span></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_23 --> <div id="page_24" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li class="active"><span>24</span></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="461"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052072p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052072p/"><span>6. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>6. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3791) Photographer unknown, 1923-25 ALHAMBRA ENTRANCE (COMMERCIAL ENTRANCE) - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21299100','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21299100"><span>Implications of coral harvest and transplantation on reefs in northwestern Dominica.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bruckner, Andrew W; Borneman, Eric H</p> <p>2010-10-01</p> <p>In June, 2002, the government of Dominica requested assistance in evaluating the coral culture and transplantation activities being undertaken by Oceanographic Institute of Dominica (OID), a coral farm culturing both western Atlantic and Indo-Pacific corals for restoration and commercial sales. We assessed the culture facilities of OID, the condition of reefs, potential impacts of coral collection and benefits of coral transplantation. Coral reefs (9 reefs, 3-20 m depth) were characterized by 35 species of scleractinian corals and a live coral cover of 8-35%. Early colonizing, brooders such as Porites astreoides (14.8% of all corals), P. porites (14.8%), Meandrina meandrites (14.7%) and Agaricia agaricites (9.1%) were the most abundant corals, but colonies were mostly small (mean = 25 cm diameter). Montastraea annularis (complex) was the other dominant taxa (20.8% of all corals) and colonies were larger (mean = 70 cm). Corals (pooled species) were missing an average of 20% of their tissue, with a mean of 1.4% recent mortality. Coral diseases affected 6.4% of all colonies, with the highest prevalence at Cabrits West (11.0%), Douglas Bay (12.2%) and Coconut Outer reef (20.7%). White plague and yellow band disease were causing the greatest loss of tissue, especially among M. annularis (complex), with localized impacts from corallivores, overgrowth by macroalgae, storm damage and sedimentation. While the reefs appeared to be undergoing substantial decline, restoration efforts by OlD were unlikely to promote recovery. No Pacific species were identified at OID restoration sites, yet species chosen for transplantation with highest survival included short-lived brooders (Agaricia and Porites) that were abundant in restoration sites, as well as non-reef builders (Palythoa and Erythropodium) that monopolize substrates and overgrow corals. The species of highest value for restoration (massive broadcast spawners) showed low survivorship and unrestored populations of these species were most affected by biotic stressors and human impacts, all of which need to be addressed to enhance survival of outplants. Problems with culture practices at OID, such as high water temperature, adequate light levels and persistent overgrowth by macroalgae could be addressed through simple modifications. Nevertheless, coral disease and other stressors are of major concern to the most important reef builders, as these species are less amenable to restoration, collection could threaten their survival and losses require decades to centuries to replace.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29582529','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29582529"><span>How can "Super Corals" facilitate global coral reef survival under rapid environmental and climatic change?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Camp, Emma F; Schoepf, Verena; Suggett, David J</p> <p>2018-03-26</p> <p>Coral reefs are in a state of rapid global decline via environmental and climate change, and efforts have intensified to identify or engineer coral populations with increased resilience. Concurrent with these efforts has been increasing use of the popularized term "Super Coral" in both popular media and scientific literature without a unifying definition. However, how this subjective term is currently applied has the potential to mislead inference over factors contributing to coral survivorship, and the future trajectory of coral reef form and functioning. Here, we discuss that the information required to support a single definition does not exist, and in fact may never be appropriate, i.e. "How Super is Super"? Instead, we advocate caution of this term, and suggest a workflow that enables contextualization and clarification of superiority to ensure that inferred or asserted survivorship is appropriate into future reef projections. This is crucial to robustly unlock how "Super Corals" can be integrated into the suite of management options required to facilitate coral survival under rapid environmental and climate change. © 2018 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70191348','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70191348"><span>Microbial disease and the coral holobiont</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Bourne, David G.; Garren, Melissa; Work, Thierry M.; Rosenberg, Eugene; Smith, Garriet W.; Harvell, C. Drew</p> <p>2009-01-01</p> <p>Tropical coral reefs harbour a reservoir of enormous biodiversity that is increasingly threatened by direct human activities and indirect global climate shifts. Emerging coral diseases are one serious threat implicated in extensive reef deterioration through disruption of the integrity of the coral holobiont – a complex symbiosis between the coral animal, endobiotic alga and an array of microorganisms. In this article, we review our current understanding of the role of microorganisms in coral health and disease, and highlight the pressing interdisciplinary research priorities required to elucidate the mechanisms of disease. We advocate an approach that applies knowledge gained from experiences in human and veterinary medicine, integrated into multidisciplinary studies that investigate the interactions between host, agent and environment of a given coral disease. These approaches include robust and precise disease diagnosis, standardised ecological methods and application of rapidly developing DNA, RNA and protein technologies, alongside established histological, microbial ecology and ecological expertise. Such approaches will allow a better understanding of the causes of coral mortality and coral reef declines and help assess potential management options to mitigate their effects in the longer term.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012CorRe..31...41I','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012CorRe..31...41I"><span>Dynamics of lipid and fatty acid composition of shallow-water corals under thermal stress: an experimental approach</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Imbs, A. B.; Yakovleva, I. M.</p> <p>2012-03-01</p> <p>Coral bleaching induces changes in lipid and fatty acid composition that result in low lipid content, reducing the likelihood of coral survival. Species-specific differences in the metabolism of lipid reserves may contribute to the differential resistance of corals under acute heat exposures. Here, we examined the dynamics of lipids and fatty acid abundance in corals subjected to short-term heat stress. The stony corals Acropora intermedia, Montipora digitata, and the soft coral Sinularia capitalis all showed a 60-75% decline in both storage and structural lipids. However, S. capitalis and M. digitata exhibited no significant change in the percentages of structural lipids (i.e., polar lipids and sterols) until they had lost 90-95% of their endosymbionts, whereas A. intermedia showed a rapid decline in structural lipids after a 50% loss of symbionts. After a 90-95% loss of symbionts under heat stress, all three corals showed a relative depletion of polyunsaturated fatty acids that had symbiont biomarkers, suggesting that polyunsaturated fatty acids were translocated from the symbiont to the coral host tissue.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013CorRe..32..495T','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013CorRe..32..495T"><span>Telomere length of the colonial coral Galaxea fascicularis at different developmental stages</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Tsuta, H.; Hidaka, M.</p> <p>2013-06-01</p> <p>The ability to estimate coral age using soft tissue would be useful for population biology or aging studies on corals. In this study, we investigated whether telomere length can be used to estimate coral age. We applied single telomere length analysis to a colonial coral, Galaxea fascicularis, and estimated telomere lengths of specific coral chromosomes at different developmental stages. If the telomere shortened at each cell division, the telomere length of the coral would be longest in sperm and shortest in adult colonies. However, the mean telomere length of sperm, planula larvae, and polyps was approximately 4 kb, with no significant differences among the developmental stages. The telomerase restriction fragment (TRF) analysis also showed no significant difference in the mean TRF length among the developmental stages. Our results suggested that telomere length is maintained during developmental stages and that estimating the age of colonial coral based on telomere length may not be possible. However, our findings can be used to examine avoidance of aging and rejuvenation during regeneration and asexual reproduction in colonial corals.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=241054&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=241054&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Key Ecological Interactions of Reef Building Corals - 11-16-2011</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Coral reefs are very important marine ecosystems because they support tremendous biodiversity and reefs are critical economic resources many coastal nations. Tropical reef structures are largely built by stony corals. This presentation provides background on basic coral biology t...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052080p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052080p/"><span>14. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>14. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, CK 109) Photographer unknown, 1923-25 ALHANBRA CIRCLE, VIEW TOWARDS GRANADA PLAZA - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052081p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052081p/"><span>15. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>15. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3872) Photographer unknown, 1923-25 VIEW OF COUNTRY CLUB PRADO BOULEVARD - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052074p/','SCIGOV-HHH'); return false;" href="https://www.loc.gov/pictures/collection/hh/item/fl0244.photos.052074p/"><span>8. Photocopy of Photograph (original print in the Coral Gables ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.loc.gov/pictures/collection/hh/">Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey</a></p> <p></p> <p></p> <p>8. Photocopy of Photograph (original print in the Coral Gables Public Library, Fishbaugh Collection, M 3829) Photographer unknown, 1923-25 SEGOVIA PLAZA AT NORTH GREENWAY DRIVE - Coral Gables (Entrances, Streets, Gates, & Squares), Coral Gables, Miami-Dade County, FL</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=227622&Lab=ORD&keyword=R+AND+programming&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=227622&Lab=ORD&keyword=R+AND+programming&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Coral Mortality and Bleaching Output</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>COMBO is a spreadsheet-based model for the use of managers, conservationists, and biologists for projecting the effects of climate change on coral reefs at local-to-regional scales. The COMBO (Coral Mortality and Bleaching Output) model calculates the impacts to coral reefs from...</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3441602','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3441602"><span>Macroalgal Extracts Induce Bacterial Assemblage Shifts and Sublethal Tissue Stress in Caribbean Corals</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Morrow, Kathleen M.; Ritson-Williams, Raphael; Ross, Cliff; Liles, Mark R.; Paul, Valerie J.</p> <p>2012-01-01</p> <p>Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene amplicons was used to examine changes in the surface mucus layer (SML) bacteria in both coral species. Some of the extracts and live algae induced detectable shifts in coral-associated bacterial assemblages. However, one aqueous extract caused the bacterial assemblages to shift to an entirely new state (Lobophora variegata), whereas other organic extracts had little to no impact (e.g. Dictyota sp.). Macroalgal extracts more frequently induced sublethal stress responses in M. faveolata than in P. astreoides corals, suggesting that cellular integrity can be negatively impacted in selected corals when comparing co-occurring species. As modern reefs experience phase-shifts to a higher abundance of macroalgae with potent chemical defenses, these macroalgae are likely impacting the composition of microbial assemblages associated with corals and affecting overall reef health in unpredicted and unprecedented ways. PMID:23028648</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/20190118','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/20190118"><span>What are the physiological and immunological responses of coral to climate warming and disease?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mydlarz, Laura D; McGinty, Elizabeth S; Harvell, C Drew</p> <p>2010-03-15</p> <p>Coral mortality due to climate-associated stress is likely to increase as the oceans get warmer and more acidic. Coral bleaching and an increase in infectious disease are linked to above average sea surface temperatures. Despite the uncertain future for corals, recent studies have revealed physiological mechanisms that improve coral resilience to the effects of climate change. Some taxa of bleached corals can increase heterotrophic food intake and exchange symbionts for more thermally tolerant clades; this plasticity can increase the probability of surviving lethal thermal stress. Corals can fight invading pathogens with a suite of innate immune responses that slow and even arrest pathogen growth and reduce further tissue damage. Several of these responses, such as the melanin cascade, circulating amoebocytes and antioxidants, are induced in coral hosts during pathogen invasion or disease. Some components of immunity show thermal resilience and are enhanced during temperature stress and even in bleached corals. These examples suggest some plasticity and resilience to cope with environmental change and even the potential for evolution of resistance to disease. However, there is huge variability in responses among coral species, and the rate of climate change is projected to be so rapid that only extremely hardy taxa are likely to survive the projected changes in climate stressors.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28839161','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28839161"><span>Metagenomic analysis reveals a green sulfur bacterium as a potential coral symbiont.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cai, Lin; Zhou, Guowei; Tian, Ren-Mao; Tong, Haoya; Zhang, Weipeng; Sun, Jin; Ding, Wei; Wong, Yue Him; Xie, James Y; Qiu, Jian-Wen; Liu, Sheng; Huang, Hui; Qian, Pei-Yuan</p> <p>2017-08-24</p> <p>Coral reefs are ecologically significant habitats. Coral-algal symbiosis confers ecological success on coral reefs and coral-microbial symbiosis is also vital to coral reefs. However, current understanding of coral-microbial symbiosis on a genomic scale is largely unknown. Here we report a potential microbial symbiont in corals revealed by metagenomics-based genomic study. Microbial cells in coral were enriched for metagenomic analysis and a high-quality draft genome of "Candidatus Prosthecochloris korallensis" was recovered by metagenome assembly and genome binning. Phylogenetic analysis shows "Ca. P. korallensis" belongs to the Prosthecochloris clade and is clustered with two Prosthecochloris clones derived from Caribbean corals. Genomic analysis reveals "Ca. P. korallensis" has potentially important ecological functions including anoxygenic photosynthesis, carbon fixation via the reductive tricarboxylic acid (rTCA) cycle, nitrogen fixation, and sulfur oxidization. Core metabolic pathway analysis suggests "Ca. P. korallensis" is a green sulfur bacterium capable of photoautotrophy or mixotrophy. Potential host-microbial interaction reveals a symbiotic relationship: "Ca. P. korallensis" might provide organic and nitrogenous nutrients to its host and detoxify sulfide for the host; the host might provide "Ca. P. korallensis" with an anaerobic environment for survival, carbon dioxide and acetate for growth, and hydrogen sulfide as an electron donor for photosynthesis.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4703987','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4703987"><span>Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Rix, Laura; de Goeij, Jasper M.; Mueller, Christina E.; Struck, Ulrich; Middelburg, Jack J.; van Duyl, Fleur C.; Al-Horani, Fuad A.; Wild, Christian; Naumann, Malik S.; van Oevelen, Dick</p> <p>2016-01-01</p> <p>Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21–40% of the mucus carbon and 32–39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments. PMID:26740019</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017PNAS..114E7670M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017PNAS..114E7670M"><span>Amorphous calcium carbonate particles form coral skeletons</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mass, Tali; Giuffre, Anthony J.; Sun, Chang-Yu; Stifler, Cayla A.; Frazier, Matthew J.; Neder, Maayan; Tamura, Nobumichi; Stan, Camelia V.; Marcus, Matthew A.; Gilbert, Pupa U. P. A.</p> <p>2017-09-01</p> <p>Do corals form their skeletons by precipitation from solution or by attachment of amorphous precursor particles as observed in other minerals and biominerals? The classical model assumes precipitation in contrast with observed “vital effects,” that is, deviations from elemental and isotopic compositions at thermodynamic equilibrium. Here, we show direct spectromicroscopy evidence in Stylophora pistillata corals that two amorphous precursors exist, one hydrated and one anhydrous amorphous calcium carbonate (ACC); that these are formed in the tissue as 400-nm particles; and that they attach to the surface of coral skeletons, remain amorphous for hours, and finally, crystallize into aragonite (CaCO3). We show in both coral and synthetic aragonite spherulites that crystal growth by attachment of ACC particles is more than 100 times faster than ion-by-ion growth from solution. Fast growth provides a distinct physiological advantage to corals in the rigors of the reef, a crowded and fiercely competitive ecosystem. Corals are affected by warming-induced bleaching and postmortem dissolution, but the finding here that ACC particles are formed inside tissue may make coral skeleton formation less susceptible to ocean acidification than previously assumed. If this is how other corals form their skeletons, perhaps this is how a few corals survived past CO2 increases, such as the Paleocene-Eocene Thermal Maximum that occurred 56 Mya.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28847944','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28847944"><span>Amorphous calcium carbonate particles form coral skeletons.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mass, Tali; Giuffre, Anthony J; Sun, Chang-Yu; Stifler, Cayla A; Frazier, Matthew J; Neder, Maayan; Tamura, Nobumichi; Stan, Camelia V; Marcus, Matthew A; Gilbert, Pupa U P A</p> <p>2017-09-12</p> <p>Do corals form their skeletons by precipitation from solution or by attachment of amorphous precursor particles as observed in other minerals and biominerals? The classical model assumes precipitation in contrast with observed "vital effects," that is, deviations from elemental and isotopic compositions at thermodynamic equilibrium. Here, we show direct spectromicroscopy evidence in Stylophora pistillata corals that two amorphous precursors exist, one hydrated and one anhydrous amorphous calcium carbonate (ACC); that these are formed in the tissue as 400-nm particles; and that they attach to the surface of coral skeletons, remain amorphous for hours, and finally, crystallize into aragonite (CaCO 3 ). We show in both coral and synthetic aragonite spherulites that crystal growth by attachment of ACC particles is more than 100 times faster than ion-by-ion growth from solution. Fast growth provides a distinct physiological advantage to corals in the rigors of the reef, a crowded and fiercely competitive ecosystem. Corals are affected by warming-induced bleaching and postmortem dissolution, but the finding here that ACC particles are formed inside tissue may make coral skeleton formation less susceptible to ocean acidification than previously assumed. If this is how other corals form their skeletons, perhaps this is how a few corals survived past CO 2 increases, such as the Paleocene-Eocene Thermal Maximum that occurred 56 Mya.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28959051','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28959051"><span>Additive negative effects of anthropogenic sedimentation and warming on the survival of coral recruits.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Fourney, Francesca; Figueiredo, Joana</p> <p>2017-09-28</p> <p>Corals worldwide are facing population declines due to global climate change and local anthropogenic impacts. Global climate change effects are hard to tackle but recent studies show that some coral species can better handle climate change stress when provided with additional energy resources. The local stressor that most undermines energy acquisition is sedimentation because it impedes coral heterotrophic feeding and their ability to photosynthesize. To investigate if reducing local sedimentation will enable corals to better endure ocean warming, we quantitatively assessed the combined effects of increased temperature and sedimentation (concentration and turbidity) on the survival of coral recruits of the species, Porites astreoides. We used sediment from a reef and a boat basin to mimic natural sediment (coarse) and anthropogenic (fine) sediment (common in dredging), respectively. Natural sediment did not negatively impact coral survival, but anthropogenic sediment did. We found that the capacity of coral recruits to survive under warmer temperatures is less compromised when anthropogenic sedimentation is maintained at the lowest level (30 mg.cm -2 ). Our study suggests that a reduction of US-EPA allowable turbidity from 29 Nephelometric Turbidity Units (NTU) above background to less than 7 NTU near coral reefs would facilitate coral recruit survival under current and higher temperatures.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70028644','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70028644"><span>Inhibition of coral recruitment by macroalgae and cyanobacteria</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Kuffner, I.B.; Walters, L.J.; Becerro, M.A.; Paul, V.J.; Ritson-Williams, R.; Beach, K.S.</p> <p>2006-01-01</p> <p>Coral recruitment is a key process in the maintenance and recovery of coral reef ecosystems. While intense competition between coral and algae is often assumed on reefs that have undergone phase shifts from coral to algal dominance, data examining the competitive interactions involved, particularly during the larval and immediate post-settlement stage, are scarce. Using a series of field and outdoor seawater table experiments, we tested the hypothesis that common species of macroalgae and cyanobacteria inhibit coral recruitment. We examined the effects of Lyngbya spp., Dictyota spp., Lobophora variegata (J. V. Lamouroux) Womersley, and Chondrophycus poiteaui (J. V. Lamouroux) Nam (formerly Laurencia poiteaui) on the recruitment success of Porites astreoides larvae. All species but C. poiteaui caused either recruitment inhibition or avoidance behavior in P. astreoides larvae, while L. confervoides and D. menstrualis significantly increased mortality rates of P. astreoides recruits. We also tested the effect of some of these macrophytes on larvae of the gorgonian octocoral Briareum asbestinum. Exposure to Lyngbya majuscula reduced survival and recruitment in the octocoral larvae. Our results provide evidence that algae and cyanobacteria use tactics beyond space occupation to inhibit coral recruitment. On reefs experiencing phase shifts or temporary algal blooms, the restocking of adult coral populations may be slowed due to recruitment inhibition, thereby perpetuating reduced coral cover and limiting coral community recovery. ?? Inter-Research 2006.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=205184','PESTICIDES'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=205184"><span>Assessing the Effects of Disease and Bleaching on Florida ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.epa.gov/pesticides/search.htm">EPA Pesticide Factsheets</a></p> <p></p> <p></p> <p>Coral diseases have increased in frequency over the past few decades and have important influences on the structure and composition of coral reef communities. However, there is limited information on the etiologies of many coral diseases, and pathways via which coral diseases are acquired and transmitted are still in question. Furthermore, it is difficult to assess the impacts of disease on coral populations because outbreaks often co-occur with temperature-induced bleaching and anthropogenic stressors. We developed spatially-explicit population models of coral disease and bleaching dynamics to quantify the impact of six common diseases on Florida Keys corals, including aspergillosis, dark spots, white band, white plague, white patch, and yellow band. Models were fit to an 8-year data set of coral abundance, disease prevalence, and bleaching prevalence. Model selection was used to assess alternative pathways for disease transmission, and the influence of environmental stressors, including sea temperature and human population density, on disease prevalence and coral mortality. Classic disease transmission from contagious to susceptible colonies provided the best model only for aspergillosis. For other diseases, direct transmission from the external environment provided the best fit to observed data. Estimates of disease reproductive ratio values (R0) were less than one for each disease, indicating coral colonies were below densities required for diseases</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li class="active"><span>24</span></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_24 --> <div id="page_25" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li class="active"><span>25</span></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="481"> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23028648','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23028648"><span>Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Morrow, Kathleen M; Ritson-Williams, Raphael; Ross, Cliff; Liles, Mark R; Paul, Valerie J</p> <p>2012-01-01</p> <p>Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene amplicons was used to examine changes in the surface mucus layer (SML) bacteria in both coral species. Some of the extracts and live algae induced detectable shifts in coral-associated bacterial assemblages. However, one aqueous extract caused the bacterial assemblages to shift to an entirely new state (Lobophora variegata), whereas other organic extracts had little to no impact (e.g. Dictyota sp.). Macroalgal extracts more frequently induced sublethal stress responses in M. faveolata than in P. astreoides corals, suggesting that cellular integrity can be negatively impacted in selected corals when comparing co-occurring species. As modern reefs experience phase-shifts to a higher abundance of macroalgae with potent chemical defenses, these macroalgae are likely impacting the composition of microbial assemblages associated with corals and affecting overall reef health in unpredicted and unprecedented ways.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26865302','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26865302"><span>Dimethylsulfoniopropionate, superoxide dismutase and glutathione as stress response indicators in three corals under short-term hyposalinity stress.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Gardner, Stephanie G; Nielsen, Daniel A; Laczka, Olivier; Shimmon, Ronald; Beltran, Victor H; Ralph, Peter J; Petrou, Katherina</p> <p>2016-02-10</p> <p>Corals are among the most active producers of dimethylsulfoniopropionate (DMSP), a key molecule in marine sulfur cycling, yet the specific physiological role of DMSP in corals remains elusive. Here, we examine the oxidative stress response of three coral species (Acropora millepora, Stylophora pistillata and Pocillopora damicornis) and explore the antioxidant role of DMSP and its breakdown products under short-term hyposalinity stress. Symbiont photosynthetic activity declined with hyposalinity exposure in all three reef-building corals. This corresponded with the upregulation of superoxide dismutase and glutathione in the animal host of all three species. For the symbiont component, there were differences in antioxidant regulation, demonstrating differential responses to oxidative stress between the Symbiodinium subclades. Of the three coral species investigated, only A. millepora provided any evidence of the role of DMSP in the oxidative stress response. Our study reveals variability in antioxidant regulation in corals and highlights the influence life-history traits, and the subcladal differences can have on coral physiology. Our data expand on the emerging understanding of the role of DMSP in coral stress regulation and emphasizes the importance of exploring both the host and symbiont responses for defining the threshold of the coral holobiont to hyposalinity stress. © 2016 The Author(s).</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.osti.gov/biblio/6526170-corals-madison-group-mississippian-williston-basin-north-dakota','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/6526170-corals-madison-group-mississippian-williston-basin-north-dakota"><span>Corals of Madison Group (Mississippian), Williston Basin, North Dakota</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Waters, D.L.; Holland, F.D. Jr.</p> <p>1983-08-01</p> <p>Coral faunas studied from subsurface cores of the Mississippian Madison Group in the Williston Basin of North Dakota indicate that Sando's coral zones for outcrops in western North America can be extended into the subsurface of North Dakota. Coral zones II and III are recognized as corresponding roughly to lower and upper Mission Canyon strata, respectively. These data were obtained from 12 wells along the northern border of North Dakota in Divide, Burke, Renville, and Bottineau Counties, and two wells near the center of Williston basin in Dunn and McKenzie Counties. Corals found in dark argillaceous crinoid-skeletal wackestones representing deepermore » waters are robust, and this may infer a hospitable environment for their growth. However, evidence from the coral and lithologic associations refute the pervading dogma that the occurrence of corals is strictly facies controlled. Abundant smaller corals have been found from buff-colored skeletal wackestones and algal mudstones which alternate with subaqueous anhydrites representing a marginal marine environment. In addition, corals have been found in buff-colored skeletal and peloidal grainstones of adjacent shoals and in brown pisolitic-oolitic packstones-wackestones of possible tidal ponds. These latter deposits may represent allochthonous accumulations, but the amount of time involved in transport of corals would not invalidate their usefulness as biostratigraphic tools.« less</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28965672','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28965672"><span>Variation in size frequency distribution of coral populations under different fishing pressures in two contrasting locations in the Indian Ocean.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Grimsditch, G; Pisapia, C; Huck, M; Karisa, J; Obura, D; Sweet, M</p> <p>2017-10-01</p> <p>This study aimed to assess how the size-frequency distributions of coral genera varied between reefs under different fishing pressures in two contrasting Indian Ocean locations (the Maldives and East Africa). Using generalized linear mixed models, we were able to demonstrate that complex interactions occurred between coral genera, coral size class and fishing pressure. In both locations, we found Acropora coral species to be more abundant in non-fished compared to fished sites (a pattern which was consistent for nearly all the assessed size classes). Coral genera classified as 'stress tolerant' showed a contrasting pattern i.e. were higher in abundance in fished compared to non-fished sites. Site specific variations were also observed. For example, Maldivian reefs exhibited a significantly higher abundance in all size classes of 'competitive' corals compared to East Africa. This possibly indicates that East African reefs have already been subjected to higher levels of stress and are therefore less suitable environments for 'competitive' corals. This study also highlights the potential structure and composition of reefs under future degradation scenarios, for example with a loss of Acropora corals and an increase in dominance of 'stress tolerant' and 'generalist' coral genera. Copyright © 2017. Published by Elsevier Ltd.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26740019','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26740019"><span>Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rix, Laura; de Goeij, Jasper M; Mueller, Christina E; Struck, Ulrich; Middelburg, Jack J; van Duyl, Fleur C; Al-Horani, Fuad A; Wild, Christian; Naumann, Malik S; van Oevelen, Dick</p> <p>2016-01-07</p> <p>Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21-40% of the mucus carbon and 32-39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016NatSR...626599L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016NatSR...626599L"><span>Heat generation and light scattering of green fluorescent protein-like pigments in coral tissue</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Lyndby, Niclas H.; Kühl, Michael; Wangpraseurt, Daniel</p> <p>2016-05-01</p> <p>Green fluorescent protein (GFP)-like pigments have been proposed to have beneficial effects on coral photobiology. Here, we investigated the relationships between green fluorescence, coral heating and tissue optics for the massive coral Dipsastraea sp. (previously Favia sp.). We used microsensors to measure tissue scalar irradiance and temperature along with hyperspectral imaging and combined imaging of variable chlorophyll fluorescence and green fluorescence. Green fluorescence correlated positively with coral heating and scalar irradiance enhancement at the tissue surface. Coral tissue heating saturated for maximal levels of green fluorescence. The action spectrum of coral surface heating revealed that heating was highest under red (peaking at 680 nm) irradiance. Scalar irradiance enhancement in coral tissue was highest when illuminated with blue light, but up to 62% (for the case of highest green fluorescence) of this photon enhancement was due to green fluorescence emission. We suggest that GFP-like pigments scatter the incident radiation, which enhances light absorption and heating of the coral. However, heating saturates, because intense light scattering reduces the vertical penetration depth through the tissue eventually leading to reduced light absorption at high fluorescent pigment density. We conclude that fluorescent pigments can have a central role in modulating coral light absorption and heating.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014BGeo...11.1799H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014BGeo...11.1799H"><span>Environmental forcing of the Campeche cold-water coral province, southern Gulf of Mexico</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hebbeln, D.; Wienberg, C.; Wintersteller, P.; Freiwald, A.; Becker, M.; Beuck, L.; Dullo, C.; Eberli, G. P.; Glogowski, S.; Matos, L.; Forster, N.; Reyes-Bonilla, H.; Taviani, M.</p> <p>2014-04-01</p> <p>With an extension of > 40 km2 the recently discovered Campeche cold-water coral province located at the northeastern rim of the Campeche Bank in the southern Gulf of Mexico belongs to the largest coherent cold-water coral areas discovered so far. The Campeche province consists of numerous 20-40 m-high elongated coral mounds that are developed in intermediate water depths of 500 to 600 m. The mounds are colonized by a vivid cold-water coral ecosystem that covers the upper flanks and summits. The rich coral community is dominated by the framework-building Scleractinia Enallopsammia profunda and Lophelia pertusa, while the associated benthic megafauna shows a rather scarce occurrence. The recent environmental setting is characterized by a high surface water production caused by a local upwelling center and a dynamic bottom-water regime comprising vigorous bottom currents, obvious temporal variability, and strong density contrasts, which all together provide optimal conditions for the growth of cold-water corals. This setting - potentially supported by the diel vertical migration of zooplankton in the Campeche area - controls the delivering of food particles to the corals. The Campeche cold-water coral province is, thus, an excellent example highlighting the importance of the oceanographic setting in securing the food supply for the development of large and vivid cold-water coral ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013BGD....1018757H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013BGD....1018757H"><span>Environmental forcing of the Campeche cold-water coral province, southern Gulf of Mexico</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hebbeln, D.; Wienberg, C.; Wintersteller, P.; Freiwald, A.; Becker, M.; Beuck, L.; Dullo, C.; Eberli, G. P.; Glogowski, S.; Matos, L.; Forster, N.; Reyes-Bonilla, H.; Taviani, M.; MSM 20-4 shipboard scientific party, the</p> <p>2013-11-01</p> <p>With an extension of >40 km2 the recently discovered Campeche cold-water coral province located at the northeastern rim of the Campeche Bank in the southern Gulf of Mexico belongs to the largest coherent cold-water coral areas discovered so far. The Campeche province consists of numerous 20 to 40 m high coral ridges that are developed in intermediate water depths of 500 to 600 m. The ridges are colonized by a vivid cold-water coral ecosystem that covers the upper flanks and summits. The rich coral community is dominated by the framework-building scleractinia Enallopsammia profunda and Lophelia pertusa while the associated benthic megafauna shows a rather scarce occurrence. The recent environmental setting is characterized by a high surface water production caused by a local upwelling center and a dynamic bottom water regime comprising vigorous bottom currents, internal waves and strong density contrasts, which all together provide optimal conditions for the growth of cold-water corals. The strong hydrodynamics - potentially supported by the diel vertical migration of zooplankton in the Campeche area - drive the delivering of food particles to the corals. The Campeche cold-water coral province is, thus, an excellent example highlighting the importance of the hydrographic setting in securing the food supply for the development of large and vivid cold-water coral ecosystems.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=307798','PESTICIDES'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=307798"><span>Workshop on Biological Integrity of Coral Reefs August 21-22 ...</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.epa.gov/pesticides/search.htm">EPA Pesticide Factsheets</a></p> <p></p> <p></p> <p>This report summarizes an EPA-sponsored workshop on coral reef biological integrity held at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico on August 21-22, 2012. The goals of this workshop were to:• Identify key qualitative and quantitative ecological characteristics (reef attributes) that determine the condition of linear coral reefs inhabiting shallow waters (<12 m) in southwestern Puerto Rico.• Use those reef attributes to recommend categorical condition rankings for establishing a biological condition gradient.• Ascertain through expert consensus those reef attributes that characterize biological integrity (a natural, fully-functioning system of organisms and communities) for coral reefs. • Develop a conceptual, narrative model that describes how biological attributes of coral reefs change along a gradient of increasing anthropogenic stress.The workshop brought together scientists with expertise in coral reef taxonomic groups (e.g., stony corals, fishes, sponges, gorgonians, algae, seagrasses and macroinvertebrates), as well as community structure, organism condition, ecosystem function and ecosystem connectivity. The experts evaluated photos and videos from 12 stations collected during EPA Coral Reef surveys (2010 & 2011) from Puerto Rico on coral reefs exhibiting a wide range of conditions. The experts individually rated each station as to observed condition (“good”, “fair” or “poor”) and documented their rationale for</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5604026','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5604026"><span>Amorphous calcium carbonate particles form coral skeletons</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Mass, Tali; Giuffre, Anthony J.; Sun, Chang-Yu; Stifler, Cayla A.; Frazier, Matthew J.; Neder, Maayan; Tamura, Nobumichi; Stan, Camelia V.; Marcus, Matthew A.</p> <p>2017-01-01</p> <p>Do corals form their skeletons by precipitation from solution or by attachment of amorphous precursor particles as observed in other minerals and biominerals? The classical model assumes precipitation in contrast with observed “vital effects,” that is, deviations from elemental and isotopic compositions at thermodynamic equilibrium. Here, we show direct spectromicroscopy evidence in Stylophora pistillata corals that two amorphous precursors exist, one hydrated and one anhydrous amorphous calcium carbonate (ACC); that these are formed in the tissue as 400-nm particles; and that they attach to the surface of coral skeletons, remain amorphous for hours, and finally, crystallize into aragonite (CaCO3). We show in both coral and synthetic aragonite spherulites that crystal growth by attachment of ACC particles is more than 100 times faster than ion-by-ion growth from solution. Fast growth provides a distinct physiological advantage to corals in the rigors of the reef, a crowded and fiercely competitive ecosystem. Corals are affected by warming-induced bleaching and postmortem dissolution, but the finding here that ACC particles are formed inside tissue may make coral skeleton formation less susceptible to ocean acidification than previously assumed. If this is how other corals form their skeletons, perhaps this is how a few corals survived past CO2 increases, such as the Paleocene–Eocene Thermal Maximum that occurred 56 Mya. PMID:28847944</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4151617','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4151617"><span>The Presence of Biomarker Enzymes of Selected Scleractinian Corals of Palk Bay, Southeast Coast of India</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Anithajothi, R.; Duraikannu, K.; Umagowsalya, G.; Ramakritinan, C. M.</p> <p>2014-01-01</p> <p>The health and existence of coral reefs are in danger by an increasing range of environmental and anthropogenic impacts. The causes of coral reef decline include worldwide climate change, shoreline development, habitat destruction, pollution, sedimentation and overexploitation. These disasters have contributed to an estimated loss of 27% of the reefs. If the current pressure continues unabated, the estimated loss of coral reef will be about 60% by the year 2030. Therefore, the present study was aimed to analyze the enzymes involved in stress induced by coral pathogen and its resistance. We focused on the enzymes involved in melanin synthesis pathway (phenoloxidase (PO) and peroxidases (POD)) and free radical scavenging enzymes (super oxide dismutase (SOD), catalase (CAT)) and glutathione peroxidase (Gpx) in selected scleractinian corals such as Acropora formosa, Echinopora lamellosa, Favia favus, Favites halicora, Porites sp., and Anacropora forbesi. Overall, PO activity of coral was significantly lower than that of zooxanthellae except for Favia favus. Coral colonies with lower PO and POD activities are prone to disease. Maximum antioxidant defensive enzymes were observed in Favia favus followed by Echinopora lamellose. It is concluded that assay of these enzymes can be used as biomarkers for identifying the susceptibility of corals towards coral bleaching induced by pathogen. PMID:25215288</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25215288','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25215288"><span>The presence of biomarker enzymes of selected Scleractinian corals of Palk Bay, southeast coast of India.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Anithajothi, R; Duraikannu, K; Umagowsalya, G; Ramakritinan, C M</p> <p>2014-01-01</p> <p>The health and existence of coral reefs are in danger by an increasing range of environmental and anthropogenic impacts. The causes of coral reef decline include worldwide climate change, shoreline development, habitat destruction, pollution, sedimentation and overexploitation. These disasters have contributed to an estimated loss of 27% of the reefs. If the current pressure continues unabated, the estimated loss of coral reef will be about 60% by the year 2030. Therefore, the present study was aimed to analyze the enzymes involved in stress induced by coral pathogen and its resistance. We focused on the enzymes involved in melanin synthesis pathway (phenoloxidase (PO) and peroxidases (POD)) and free radical scavenging enzymes (super oxide dismutase (SOD), catalase (CAT)) and glutathione peroxidase (Gpx) in selected scleractinian corals such as Acropora formosa, Echinopora lamellosa, Favia favus, Favites halicora, Porites sp., and Anacropora forbesi. Overall, PO activity of coral was significantly lower than that of zooxanthellae except for Favia favus. Coral colonies with lower PO and POD activities are prone to disease. Maximum antioxidant defensive enzymes were observed in Favia favus followed by Echinopora lamellose. It is concluded that assay of these enzymes can be used as biomarkers for identifying the susceptibility of corals towards coral bleaching induced by pathogen.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017CorRe..36...39M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017CorRe..36...39M"><span>Low sediment loads affect survival of coral recruits: the first weeks are crucial</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Moeller, Mareen; Nietzer, Samuel; Schils, Tom; Schupp, Peter J.</p> <p>2017-03-01</p> <p>Increased sedimentation due to anthropogenic activities is a threat to many nearshore coral reefs. The effects on adult corals have been studied extensively and are well known. Studies about the impact of sedimentation on the early life stages of scleractinian corals, however, are rare although recruitment is essential for conserving and restoring coral reefs. Laboratory and in situ experiments with recruits of different age classes focused on the broadcast-spawning species Acropora hyacinthus and the brooding coral Leptastrea purpurea. Recruits were exposed to different sediment loads over three to five weeks. Applied sediment loads were more than one order of magnitude lower than those known to affect survival of adult coral colonies. Growth and survival of newly settled recruits were negatively affected by sediment loads that had no effect on the growth and survival of one-month-old recruits. All experiments indicated that newly settled coral recruits are most sensitive to sedimentation within the first two to four weeks post settlement. The co-occurrence of moderate sedimentation events during and immediately after periods of coral spawning can therefore reduce recruitment success substantially. These findings provide new information to develop comprehensive sediment management plans for the conservation and recovery of coral reefs affected by chronic or acute sedimentation events.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2007AGUFM.B31C0506C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2007AGUFM.B31C0506C"><span>Diversity And Abundance Of Deep-Water Coral Mounds In The Straits Of Florida: A Result of Adaptability To Local Environments?</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Correa, T. B.; Grasmueck, M.; Eberli, G.; Viggiano, D. A.; Rosenberg, A.; Reed, J. K.</p> <p>2007-12-01</p> <p>To improve the understanding of the Florida-Bahamas deep-water coral mound ecosystem, Autonomous Underwater Vehicle (AUV) surveys were conducted on five coral mound fields throughout the Straits of Florida (three sites at the base of slope of Great Bahama Bank (GBB), one in the middle of the Straits (MS) and one at the base of the Miami Terrace (MT)) in water depths of 590 to 860 m. The AUV provides high-resolution bathymetric maps, sub-bottom profiles and oceanographic data. The AUV survey sites were subsequently groundtruthed via sample collection and video transects, using the Johnson Sealink submersible. Contrary to previous surveys, we found a high diversity in coral mound morphology between sites separated by 15 to 80 km. The MT site is characterized by sinusoidal coral mound ridges, while the MS site contains densely clustered small coral mounds. Meanwhile, mounds of the GBB region are better developed, with some individual mounds reaching up to 90 m in height. Benthic coverage of live corals also differs between sites; the GBB sites are characterized by mounds densely covered by large thickets of live corals, while small thickets of mostly dead corals dominate the MT and MS sites. Several environmental factors may explain these differences. For example, bottom current patterns change between sites. The MT and the MS sites have a unidirectional regime (southward or northward flow, respectively), whereas the GBB sites have a tidal current regime. Sedimentation patterns as depicted by sub-bottom profiles also vary between the sites; coral mounds in the GBB area appear to receive higher sediment input, which can significantly enhance mound growth rates as the reef framework baffles and traps mobile sediments. However, coral mounds that cannot keep-up with the sedimentation rate are buried. Therefore, in the high sedimentation areas of GBB, flourishing live coral mounds are limited to elevated positions (i.e. plateaus, ridges crests) where sediment accumulation is lessened. Corals in these raised locations also benefit from increased exposure to nutrient-rich tidal currents, supporting a denser live coral coverage. Sub-bottom profiles of the MT site show undulating coral ridges developed on top of a relatively flat sub-surface, indicating that antecedent topography is not the only factor determining mound distribution. The integrated AUV data suggest that variable environmental factors, such as sedimentation and current patterns, contribute to the high diversity between coral mound sites of the Straits of Florida. Environmental conditions change over distances of only a few kilometers creating localized and diverse deep-water coral habitats. The deepwater fauna adapts to the local oceanographic and geological conditions. This results in an unexpectedly high abundance of deep-water coral communities with diverse expressions.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26925311','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26925311"><span>RNA-Seq of the Caribbean reef-building coral Orbicella faveolata (Scleractinia-Merulinidae) under bleaching and disease stress expands models of coral innate immunity.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Anderson, David A; Walz, Marcus E; Weil, Ernesto; Tonellato, Peter; Smith, Matthew C</p> <p>2016-01-01</p> <p>Climate change-driven coral disease outbreaks have led to widespread declines in coral populations. Early work on coral genomics established that corals have a complex innate immune system, and whole-transcriptome gene expression studies have revealed mechanisms by which the coral immune system responds to stress and disease. The present investigation expands bioinformatic data available to study coral molecular physiology through the assembly and annotation of a reference transcriptome of the Caribbean reef-building coral, Orbicella faveolata. Samples were collected during a warm water thermal anomaly, coral bleaching event and Caribbean yellow band disease outbreak in 2010 in Puerto Rico. Multiplex sequencing of RNA on the Illumina GAIIx platform and de novo transcriptome assembly by Trinity produced 70,745,177 raw short-sequence reads and 32,463 O. faveolata transcripts, respectively. The reference transcriptome was annotated with gene ontologies, mapped to KEGG pathways, and a predicted proteome of 20,488 sequences was generated. Protein families and signaling pathways that are essential in the regulation of innate immunity across Phyla were investigated in-depth. Results were used to develop models of evolutionarily conserved Wnt, Notch, Rig-like receptor, Nod-like receptor, and Dicer signaling. O. faveolata is a coral species that has been studied widely under climate-driven stress and disease, and the present investigation provides new data on the genes that putatively regulate its immune system.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4768675','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4768675"><span>RNA-Seq of the Caribbean reef-building coral Orbicella faveolata (Scleractinia-Merulinidae) under bleaching and disease stress expands models of coral innate immunity</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Walz, Marcus E.; Weil, Ernesto; Smith, Matthew C.</p> <p>2016-01-01</p> <p>Climate change-driven coral disease outbreaks have led to widespread declines in coral populations. Early work on coral genomics established that corals have a complex innate immune system, and whole-transcriptome gene expression studies have revealed mechanisms by which the coral immune system responds to stress and disease. The present investigation expands bioinformatic data available to study coral molecular physiology through the assembly and annotation of a reference transcriptome of the Caribbean reef-building coral, Orbicella faveolata. Samples were collected during a warm water thermal anomaly, coral bleaching event and Caribbean yellow band disease outbreak in 2010 in Puerto Rico. Multiplex sequencing of RNA on the Illumina GAIIx platform and de novo transcriptome assembly by Trinity produced 70,745,177 raw short-sequence reads and 32,463 O. faveolata transcripts, respectively. The reference transcriptome was annotated with gene ontologies, mapped to KEGG pathways, and a predicted proteome of 20,488 sequences was generated. Protein families and signaling pathways that are essential in the regulation of innate immunity across Phyla were investigated in-depth. Results were used to develop models of evolutionarily conserved Wnt, Notch, Rig-like receptor, Nod-like receptor, and Dicer signaling. O. faveolata is a coral species that has been studied widely under climate-driven stress and disease, and the present investigation provides new data on the genes that putatively regulate its immune system. PMID:26925311</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4201335','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4201335"><span>Microbiota of Healthy Corals Are Active against Fungi in a Light-Dependent Manner</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p></p> <p>2015-01-01</p> <p>Coral reefs are intricate ecosystems that harbor diverse organisms, including 25% of all marine fish. Healthy corals exhibit a complex symbiosis between coral polyps, endosymbiotic alga, and an array of microorganisms, called the coral holobiont. Secretion of specialized metabolites by coral microbiota is thought to contribute to the defense of this sessile organism against harmful biotic and abiotic factors. While few causative agents of coral diseases have been unequivocally identified, fungi have been implicated in the massive destruction of some soft corals worldwide. Because corals are nocturnal feeders, they may be more vulnerable to fungal infection at night, and we hypothesized that the coral microbiota would have the capability to enhance their defenses against fungi in the dark. A Pseudoalteromonas sp. isolated from a healthy octocoral displayed light-dependent antifungal properties when grown adjacent to Penicilliumcitrinum (P. citrinum) isolated from a diseased Gorgonian octocoral. Microbial MALDI-imaging mass spectrometry (IMS) coupled with molecular network analyses revealed that Pseudoalteromonas produced higher levels of antifungal polyketide alteramides in the dark than in the light. The alteramides were inactivated by light through a photoinduced intramolecular cyclization. Further NMR studies led to a revision of the stereochemical structure of the alteramides. Alteramide A exhibited antifungal properties and elicited changes in fungal metabolite distributions of mycotoxin citrinin and citrinadins. These data support the hypothesis that coral microbiota use abiotic factors such as light to regulate the production of metabolites with specialized functions to combat opportunistic pathogens at night. PMID:25058318</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22194883','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22194883"><span>Settling into an increasingly hostile world: the rapidly closing "recruitment window" for corals.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Arnold, Suzanne N; Steneck, Robert S</p> <p>2011-01-01</p> <p>Free space is necessary for larval recruitment in all marine benthic communities. Settling corals, with limited energy to invest in competitive interactions, are particularly vulnerable during settlement into well-developed coral reef communities. This situation may be exacerbated for corals settling into coral-depauperate reefs where succession in nursery microhabitats moves rapidly toward heterotrophic organisms inhospitable to settling corals. To study effects of benthic organisms (at millimeter to centimeter scales) on newly settled corals and their survivorship we deployed terra-cotta coral settlement plates at 10 m depth on the Mesoamerican Barrier Reef in Belize and monitored them for 38 mo. During the second and third years, annual recruitment rates declined by over 50% from the previous year. Invertebrate crusts (primarily sponges) were absent at the start of the experiment but increased in abundance annually from 39, 60, to 73% of the plate undersides by year three. Subsequently, substrates hospitable to coral recruitment, including crustose coralline algae, biofilmed terra-cotta and polychaete tubes, declined. With succession, substrates upon which spat settled shifted toward organisms inimical to survivorship. Over 50% of spat mortality was due to overgrowth by sponges alone. This result suggests that when a disturbance creates primary substrate a "recruitment window" for settling corals exists from approximately 9 to 14 mo following the disturbance. During the window, early-succession, facilitating species are most abundant. The window closes as organisms hostile to coral settlement and survivorship overgrow nursery microhabitats.</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5358778','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5358778"><span>Genotype and local environment dynamically influence growth, disturbance response and survivorship in the threatened coral, Acropora cervicornis</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Drury, Crawford; Manzello, Derek; Lirman, Diego</p> <p>2017-01-01</p> <p>The relationship between the coral genotype and the environment is an important area of research in degraded coral reef ecosystems. We used a reciprocal outplanting experiment with 930 corals representing ten genotypes on each of eight reefs to investigate the influence of genotype and the environment on growth and survivorship in the threatened Caribbean staghorn coral, Acropora cervicornis. Coral genotype and site were strong drivers of coral growth and individual genotypes exhibited flexible, non-conserved reaction norms, complemented by ten-fold differences in growth between specific G-E combinations. Growth plasticity may diminish the influence of local adaptation, where foreign corals grew faster than native corals at their home sites. Novel combinations of environment and genotype also significantly affected disturbance response during and after the 2015 bleaching event, where these factors acted synergistically to drive variation in bleaching and recovery. Importantly, small differences in temperature stress elicit variable patterns of survivorship based on genotype and illustrate the importance of novel combinations of coral genetics and small differences between sites representing habitat refugia. In this context, acclimatization and flexibility is especially important given the long lifespan of corals coping with complex environmental change. The combined influence of site and genotype creates short-term differences in growth and survivorship, contributing to the standing genetic variation needed for adaptation to occur over longer timescales and the recovery of degraded reefs through natural mechanisms. PMID:28319134</p> </li> <li> <p><a target="_blank" rel="noopener noreferrer" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22968792','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22968792"><span>Global coral disease prevalence associated with sea temperature anomalies and local factors.</span></a></p> <p><a target="_blank" rel="noopener noreferrer" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ruiz-Moreno, Diego; Willis, Bette L; Page, A Cathie; Weil, Ernesto; Cróquer, Aldo; Vargas-Angel, Bernardo; Jordan-Garza, Adán Guillermo; Jordán-Dahlgren, Eric; Raymundo, Laurie; Harvell, C Drew</p> <p>2012-09-12</p> <p>Coral diseases are taking an increasing toll on coral reef structure and biodiversity and are important indicators of declining health in the oceans. We implemented standardized coral disease surveys to pinpoint hotspots of coral disease, reveal vulnerable coral families and test hypotheses about climate drivers from 39 locations worldwide. We analyzed a 3 yr study of coral disease prevalence to identify links between disease and a range of covariates, including thermal anomalies (from satellite data), location and coral cover, using a Generalized Linear Mixed Model. Prevalence of unhealthy corals, i.e. those with signs of known diseases or with other signs of compromised health, exceeded 10% on many reefs and ranged to over 50% on some. Disease prevalence exceeded 10% on 20% of Caribbean reefs and 2.7% of Pacific reefs surveyed. Within the same coral families across oceans, prevalence of unhealthy colonies was higher and some diseases were more common at sites in the Caribbean than those in the Pacific. The effects of high disease prevalence are potentially extensive given that the most affected coral families, the acroporids, faviids and siderastreids, are among the major reef-builders at these sites. The poritids and agaricids stood out in the Caribbean as being the most resistant to disease, even though these families were abundant in our surveys. Regional warm temperature anomalies were strongly correlated with high disease prevalence. The levels of disease reported here will provide a much-needed local reference point against which to compare future change.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li class="active"><span>25</span></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_25 --> <div class="footer-extlink text-muted" style="margin-bottom:1rem; text-align:center;">Some links on this page may take you to non-federal websites. 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